BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 011714
         (479 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224140601|ref|XP_002323670.1| predicted protein [Populus trichocarpa]
 gi|222868300|gb|EEF05431.1| predicted protein [Populus trichocarpa]
          Length = 535

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 253/439 (57%), Positives = 330/439 (75%), Gaps = 1/439 (0%)

Query: 41  ESLDLKENPRSLQAQRFVDRIKASPLKERID-IFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           ESLD  E     Q    ++ +KA P KER+D I   + K+   +++SDFND+LMALV  N
Sbjct: 96  ESLDFDEKASKFQVLDLLNAVKALPCKERVDYIVRVLDKEIGFFNISDFNDVLMALVTAN 155

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           E +  +K +S  S Y L PNSWTFSIM+RC+C K D  EA++V+D M   G++PNV T T
Sbjct: 156 ESDLVLKLYSGLSCYSLEPNSWTFSIMVRCHCKKKDPGEAKRVLDQMMQKGFNPNVATLT 215

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           IL+NS CK G+L+   +V + M RIGCKPNIQTYNCLLKG+CYVGR++EA+E++ ++K  
Sbjct: 216 ILINSFCKMGQLQNTFQVFEVMDRIGCKPNIQTYNCLLKGMCYVGRIDEAFELMEDIKKT 275

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            ++PD+YTYTA+MDGFCKVGRS+EAMELLNEA+E G+ PNVVTFNTL +GY KEG P+KG
Sbjct: 276 TVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPNVVTFNTLLDGYAKEGRPLKG 335

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
            G+LKLMK+R C+PD ISYSTLL+GLL WGK+   + IF EM   G E DER+MNSL+RG
Sbjct: 336 FGVLKLMKQRKCMPDYISYSTLLHGLLLWGKVLAGLRIFNEMEGSGLEADERLMNSLVRG 395

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC KS +E DL+E AY+VFEKM K+  V +  TY +VI+ L   KK D+A I+LH  + +
Sbjct: 396 LCRKSIKENDLVEVAYEVFEKMKKRGFVIEQSTYALVIQALWVAKKVDDAFINLHQMVRL 455

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G+IPR IT NNVIQALC  GK+DKA  +L LMYE++KIPSR SYD+LI +L++ E++  A
Sbjct: 456 GYIPRLITINNVIQALCVGGKVDKAFYVLVLMYENSKIPSRMSYDLLIHELNRQERTLGA 515

Query: 460 CALYGAALKQGVIPQRKPQ 478
           C +YGAAL +GV+P +KP+
Sbjct: 516 CNVYGAALVRGVVPHKKPR 534


>gi|357506669|ref|XP_003623623.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498638|gb|AES79841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/475 (42%), Positives = 305/475 (64%), Gaps = 17/475 (3%)

Query: 15  TNRRNHNKIPQFNKLVVF--AAASLSTAES----------LDLKENPRSLQAQRFVDRIK 62
           T + N+NK   F+ +  F     S S   S          +D ++     + +  V +I 
Sbjct: 24  TTKSNNNKTINFHPIKPFIQTTHSFSITNSTTKHTTNNNLVDFQDKTTRSEIKNLVQKIT 83

Query: 63  A-SPLKER----IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA 117
           + S  K +    + I D+   +    ++SDFN LLMALV+  + +     F++ SS+ L 
Sbjct: 84  SLSTSKNKTQLLLQILDNTASEFQIQTISDFNHLLMALVIAQKPDFCQTMFTKLSSFHLV 143

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+S T+SIMIRC+C+KN+  EA++V+  + +NG+ P+  T T+L+NSLCK G++K+A+EV
Sbjct: 144 PDSCTYSIMIRCHCSKNELEEAKRVLFTVLENGFEPDSATITVLINSLCKRGKVKKAMEV 203

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
            + + R G K  +Q YNCLL+GL YVGRV+EA E+LM++K   +  DVY+Y+AVM+G CK
Sbjct: 204 FEFLERKGLKLGVQAYNCLLRGLAYVGRVDEAVEILMDMKTGNIGVDVYSYSAVMNGLCK 263

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           VGRS+EAMEL +EA+  G+ P+VVTFN L  GY +EG  M+GVG+LK+MK+  C+ D I+
Sbjct: 264 VGRSDEAMELFDEAVGVGLRPDVVTFNALIEGYSREGREMEGVGVLKMMKEHGCVADLIN 323

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y T+L+GLLKW +   A  ++KEMVR GFEVD RMM +L+R LC  SW EK LLEDA +V
Sbjct: 324 YKTVLHGLLKWNETVEAFGVYKEMVRIGFEVDSRMMGTLVRRLCKLSWREKGLLEDACEV 383

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           FEKM ++  V D  T  +++  L +G+K DEAL++L+  +  G+    I F  VI+ LCG
Sbjct: 384 FEKMKERGLVVDKRTVEVMVEALFRGEKFDEALVNLNDMVRWGYSLEGIAFEEVIEGLCG 443

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           +G++D+A+  L L+  +     R S+ +L+ +L+   + + A  L+G ALK GV+
Sbjct: 444 QGRVDEAVSTLLLLQANGGFLDRVSFGVLVNELNAHGRVFCASFLFGVALKHGVV 498


>gi|212275248|ref|NP_001130560.1| uncharacterized protein LOC100191659 [Zea mays]
 gi|194689480|gb|ACF78824.1| unknown [Zea mays]
          Length = 558

 Score =  329 bits (844), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 164/423 (38%), Positives = 254/423 (60%), Gaps = 7/423 (1%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           A+    RI   P++ER+ + D +++D    +VSD+ND+L AL    +  TAV  F    +
Sbjct: 114 ARDCAKRIMELPVEERVKVLDLLQRDDAALTVSDYNDILSALARAGDHATAVALFR---A 170

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
             +AP++ +F+  ++C C +    EA+  +D M   G+ P+V TF+ +V  LCK GR+ +
Sbjct: 171 MPVAPDAHSFATAVQCLCRQGAPDEAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTK 230

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A+EVLD M  +GC+P I+TYN L+ GLCYVGR+EEA E+L  +K+  L PD+YT+T V+D
Sbjct: 231 AMEVLDAMLGLGCEPTIRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLD 290

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN--- 290
           GFCKVGR+ EA  + ++AI  G++P   T+N L NG+CKEG P+K   LL  M   N   
Sbjct: 291 GFCKVGRTEEATAIFHDAIGMGLSPTTFTYNALLNGHCKEGNPLKAFALLMEMCGNNDAA 350

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           CLPDK S+  +L  LL+ G+   A   +K M R GFEVD R +++L RGLC +   +   
Sbjct: 351 CLPDKTSFGIVLTALLRAGETSAAWQTYKRMERAGFEVDGRALDTLARGLCRRCATDASA 410

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           L DA +VF K+          TY ++ + L +G + D A+  L   +  G+  R   + +
Sbjct: 411 LGDAEEVFGKVVASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRKGYALRKRAYTD 470

Query: 411 VIQALCGEGKIDKAL-LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           V++ALC  G+   AL +L+ +M     +P R +++ L+ +L +  +  DA  +Y AA+K+
Sbjct: 471 VVRALCDRGRARDALQVLVLVMIVRDFVPGRNAFEALLGELSRQGRWADAMTVYAAAVKR 530

Query: 470 GVI 472
           GV+
Sbjct: 531 GVV 533



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 91/194 (46%), Gaps = 8/194 (4%)

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           V +L L+++ +       Y+ +L+ L + G    AV++F+ M       D     + ++ 
Sbjct: 130 VKVLDLLQRDDAALTVSDYNDILSALARAGDHATAVALFRAMP---VAPDAHSFATAVQC 186

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC +   +     +A    ++M  +       T+  V+  L K  +  +A+  L   + +
Sbjct: 187 LCRQGAPD-----EAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMLGL 241

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P   T+N+++  LC  G++++AL LL  + +    P   ++ +++    ++ ++ +A
Sbjct: 242 GCEPTIRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEA 301

Query: 460 CALYGAALKQGVIP 473
            A++  A+  G+ P
Sbjct: 302 TAIFHDAIGMGLSP 315


>gi|195650415|gb|ACG44675.1| hypothetical protein [Zea mays]
          Length = 558

 Score =  328 bits (841), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 164/423 (38%), Positives = 253/423 (59%), Gaps = 7/423 (1%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           A+    RI   P++ER+ + D +++D    +VSD+ND+L AL    +  TAV  F    +
Sbjct: 114 ARDCAKRIMELPVEERVKVLDLLQRDDAALTVSDYNDILSALARAGDHATAVALFR---A 170

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
             +AP++ +F+  ++C C +    EA+  +D M   G+ P+V TF+ +V  LCK GR+ +
Sbjct: 171 MPVAPDAHSFATAVQCLCRQGAPDEAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTK 230

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A+EVLD M  +GC+P I+TYN L+ GLCYVGR+EEA E+L  +K+  L PD+YT+T V+D
Sbjct: 231 AMEVLDAMLGLGCEPTIRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLD 290

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN--- 290
           GFCKVGR+ EA  + ++AI  G++P   T+N L NG CKEG P+K   LL  M   N   
Sbjct: 291 GFCKVGRTEEATAIFHDAIGMGLSPTTFTYNALLNGXCKEGNPLKAFALLMEMCGNNDAA 350

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           CLPDK S+  +L  LL+ G+   A   +K M R GFEVD R +++L RGLC +   +   
Sbjct: 351 CLPDKTSFGIVLTALLRAGETSAAWQTYKRMERAGFEVDGRALDTLARGLCRRCATDASA 410

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           L DA +VF K+          TY ++ + L +G + D A+  L   +  G+  R   + +
Sbjct: 411 LGDAEEVFGKVVASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRKGYALRKRAYTD 470

Query: 411 VIQALCGEGKIDKAL-LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           V++ALC  G+   AL +L+ +M     +P R +++ L+ +L +  +  DA  +Y AA+K+
Sbjct: 471 VVRALCDRGRARDALQVLVLVMIVRDFVPGRNAFEALLGELSRQGRWADAMTVYAAAVKR 530

Query: 470 GVI 472
           GV+
Sbjct: 531 GVV 533



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 91/194 (46%), Gaps = 8/194 (4%)

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           V +L L+++ +       Y+ +L+ L + G    AV++F+ M       D     + ++ 
Sbjct: 130 VKVLDLLQRDDAALTVSDYNDILSALARAGDHATAVALFRAMP---VAPDAHSFATAVQC 186

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC +   +     +A    ++M  +       T+  V+  L K  +  +A+  L   + +
Sbjct: 187 LCRQGAPD-----EAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMLGL 241

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P   T+N+++  LC  G++++AL LL  + +    P   ++ +++    ++ ++ +A
Sbjct: 242 GCEPTIRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEA 301

Query: 460 CALYGAALKQGVIP 473
            A++  A+  G+ P
Sbjct: 302 TAIFHDAIGMGLSP 315


>gi|115452873|ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group]
 gi|108708021|gb|ABF95816.1| expressed protein [Oryza sativa Japonica Group]
 gi|113548508|dbj|BAF11951.1| Os03g0336000 [Oryza sativa Japonica Group]
 gi|125543773|gb|EAY89912.1| hypothetical protein OsI_11461 [Oryza sativa Indica Group]
 gi|215712300|dbj|BAG94427.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 545

 Score =  322 bits (824), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 158/415 (38%), Positives = 250/415 (60%), Gaps = 2/415 (0%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           RI   P++ER+ + D +++D    +VSD+ND+L AL M  + ++AV  F      G+ P+
Sbjct: 103 RIMGLPVEERVKVLDLLQRDDGALTVSDYNDILSALAMAGDHDSAVALFRALRPNGVTPD 162

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           + +++  ++C C K    EA++ +D M   G+ P V TF+ +V  LCK GR+  A+EV D
Sbjct: 163 AQSYATAVQCLCRKGAPDEAKEALDEMVARGFRPTVATFSAVVGCLCKRGRVTRAMEVFD 222

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK-PDVYTYTAVMDGFCKV 238
            M  +GC+P I+TYN L+ GLCYVGR+EEA ++L  +K    + PD+YT+T V+DGFCKV
Sbjct: 223 TMRAVGCEPTIRTYNSLIGGLCYVGRLEEALDLLNKLKESPKQTPDIYTFTIVLDGFCKV 282

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKIS 297
           GR++EA  + ++A+  G++P + T+N L NG+CKEG P+K   LL ++     C PD+IS
Sbjct: 283 GRTDEATPIFHDAVRNGLSPTIFTYNALLNGHCKEGNPLKAYSLLMEMCGNAACPPDRIS 342

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           +S +L  LL+ G+   A   +K M R GFE D R +++L RGLC +       L DA +V
Sbjct: 343 FSIVLQALLRAGETSAAWQAYKRMERAGFEADGRALDTLARGLCRQCAANVAALADAREV 402

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           F K+          TY ++ + L +G + D A+  L      G+  R   + +V++ALC 
Sbjct: 403 FGKLVASGHEPVSYTYCLMAQALARGGEVDAAVSLLGEMARRGYALRKRAYTDVVRALCE 462

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            G+   AL +L L+     +P R ++D L+ +L +  +  DA A+Y AA+K+GV+
Sbjct: 463 RGRARDALRVLALVIARDFVPGRNAFDALLGELARQGRWPDAMAVYAAAVKRGVL 517


>gi|219885281|gb|ACL53015.1| unknown [Zea mays]
 gi|414866677|tpg|DAA45234.1| TPA: hypothetical protein ZEAMMB73_414823 [Zea mays]
          Length = 559

 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 165/423 (39%), Positives = 254/423 (60%), Gaps = 7/423 (1%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           A+    RI   P++ER+ + D + +D    +VSD+ND+L AL    +  TAV  F    +
Sbjct: 115 ARDCAKRIMELPVEERVKVLDLLPRDDAALTVSDYNDILSALARAGDHATAVALFR---A 171

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
             +AP++ +F+  ++C C +    EA+  +D M   G+ P+V TF+ +V  LCK GR+ +
Sbjct: 172 MPVAPDAHSFATAVQCLCRQGAPDEAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTK 231

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A+EVLD M  +GC+P I+TYN L+ GLCYVGR+EEA E+L  +K+  L PD+YT+T V+D
Sbjct: 232 AMEVLDAMCGLGCEPTIRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLD 291

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN--- 290
           GFCKVGR+ EA  + ++AI  G++P   T+N L NG+CKEG P+K   LL  M   N   
Sbjct: 292 GFCKVGRTEEATAIFHDAIGMGLSPTTFTYNALLNGHCKEGNPLKAFALLMEMCGNNDAA 351

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           CLPDK S+  +L  LL+ G+   A   +K M R GFEVD R +++L RGLC +   +   
Sbjct: 352 CLPDKTSFGIVLTALLRAGETSAAWQTYKRMERAGFEVDGRALDTLARGLCRRCATDASA 411

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           L DA +VF K+          TY ++ + L +G + D A+  L   +  G+  R   + +
Sbjct: 412 LGDAEEVFAKVVASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRKGYALRKRAYTD 471

Query: 411 VIQALCGEGKIDKAL-LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           V++ALC  G+   AL +L+ +M     +P R +++ L+ +L +  +  DA A+Y AA+K+
Sbjct: 472 VVRALCDRGRARDALQVLVLVMIVRDFVPGRNAFEALLGELSRQGRWADAMAVYAAAVKR 531

Query: 470 GVI 472
           GV+
Sbjct: 532 GVV 534



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 89/194 (45%), Gaps = 8/194 (4%)

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           V +L L+ + +       Y+ +L+ L + G    AV++F+ M       D     + ++ 
Sbjct: 131 VKVLDLLPRDDAALTVSDYNDILSALARAGDHATAVALFRAMP---VAPDAHSFATAVQC 187

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC +   +     +A    ++M  +       T+  V+  L K  +  +A+  L     +
Sbjct: 188 LCRQGAPD-----EAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMCGL 242

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P   T+N+++  LC  G++++AL LL  + +    P   ++ +++    ++ ++ +A
Sbjct: 243 GCEPTIRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEA 302

Query: 460 CALYGAALKQGVIP 473
            A++  A+  G+ P
Sbjct: 303 TAIFHDAIGMGLSP 316


>gi|357112338|ref|XP_003557966.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 538

 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 154/416 (37%), Positives = 253/416 (60%), Gaps = 3/416 (0%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG-LAP 118
           RI + P++ER+ + D +++D    ++SD+ND+L AL    + ++A+  F      G +AP
Sbjct: 97  RIMSLPMEERVKVLDLLQRDDAALTISDYNDILSALARGGDYDSAMALFRALEPNGTVAP 156

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           ++ +F+I ++C+C K    EA++ +D M   GY P V+ F+ +V  LCK GR+  A+EVL
Sbjct: 157 DAHSFAIAVQCFCRKGAPDEAKETLDEMLARGYLPTVSAFSAVVGCLCKRGRVTRAMEVL 216

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK-PDVYTYTAVMDGFCK 237
           D M  +GC+P I+TYN L+ GLCYVGR+E+A ++L  +K+   +  D+YT+T V+DGFCK
Sbjct: 217 DAMRGVGCEPTIRTYNSLIGGLCYVGRLEDARDLLNKLKDSPKQTADIYTFTIVLDGFCK 276

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKI 296
           VGR+++AM +  +A+  G++P + T+N L NG+CKEG  +K   LL ++     C PDKI
Sbjct: 277 VGRTDDAMAIFEDAVRTGLSPTIFTYNALLNGHCKEGHLLKAYNLLMEMCDNETCPPDKI 336

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           S+S +L  LL+ G+I  A   FK M   G E D R +++L RGLC +   +   L DA +
Sbjct: 337 SFSIVLPALLRAGEISAAWQTFKRMEHAGLEADGRALDTLTRGLCRQCAADISALRDAKE 396

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           VF K+          TY ++ + L +G + D A+  L      G+  R   + +V++ALC
Sbjct: 397 VFGKLVSSGHEPVSYTYCLMAQALARGGEVDAAVAILDDMARKGYALRKRAYTDVVRALC 456

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
              +  +A+ +L ++     +P R ++D L+ +L +  +  DA A+Y AA+K+GV+
Sbjct: 457 DRSRTSEAVRVLAVVIARDFVPGRNAFDALLGELSRQGRWPDAMAVYAAAVKRGVV 512


>gi|219885451|gb|ACL53100.1| unknown [Zea mays]
          Length = 437

 Score =  313 bits (802), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 162/412 (39%), Positives = 250/412 (60%), Gaps = 7/412 (1%)

Query: 65  PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           P++ER+ + D + +D    +VSD+ND+L AL    +  TAV  F    +  +AP++ +F+
Sbjct: 4   PVEERVKVLDLLPRDDAALTVSDYNDILSALARAGDHATAVALFR---AMPVAPDAHSFA 60

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
             ++C C +    EA+  +D M   G+ P+V TF+ +V  LCK GR+ +A+EVLD M  +
Sbjct: 61  TAVQCLCRQGAPDEAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMCGL 120

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           GC+P I+TYN L+ GLCYVGR+EEA E+L  +K+  L PD+YT+T V+DGFCKVGR+ EA
Sbjct: 121 GCEPTIRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEA 180

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN---CLPDKISYSTL 301
             + ++AI  G++P   T+N L NG+CKEG P+K   LL  M   N   CLPDK S+  +
Sbjct: 181 TAIFHDAIGMGLSPTTFTYNALLNGHCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIV 240

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L  LL+ G+   A   +K M R GFEVD R +++L RGLC +   +   L DA +VF K+
Sbjct: 241 LTALLRAGETSAAWQTYKRMERAGFEVDGRALDTLARGLCRRCATDASALGDAEEVFAKV 300

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                     TY ++ + L +G + D A+  L   +  G+  R   + +V++ALC  G+ 
Sbjct: 301 VASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRKGYALRKRAYTDVVRALCDRGRA 360

Query: 422 DKAL-LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             AL +L+ +M     +P R +++ L+ +L +  +  DA A+Y AA+K+GV+
Sbjct: 361 RDALQVLVLVMIVRDFVPGRNAFEALLGELSRQGRWADAMAVYAAAVKRGVV 412



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 89/194 (45%), Gaps = 8/194 (4%)

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           V +L L+ + +       Y+ +L+ L + G    AV++F+ M       D     + ++ 
Sbjct: 9   VKVLDLLPRDDAALTVSDYNDILSALARAGDHATAVALFRAMP---VAPDAHSFATAVQC 65

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC +   +     +A    ++M  +       T+  V+  L K  +  +A+  L     +
Sbjct: 66  LCRQGAPD-----EAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMCGL 120

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P   T+N+++  LC  G++++AL LL  + +    P   ++ +++    ++ ++ +A
Sbjct: 121 GCEPTIRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEA 180

Query: 460 CALYGAALKQGVIP 473
            A++  A+  G+ P
Sbjct: 181 TAIFHDAIGMGLSP 194


>gi|242041019|ref|XP_002467904.1| hypothetical protein SORBIDRAFT_01g036150 [Sorghum bicolor]
 gi|241921758|gb|EER94902.1| hypothetical protein SORBIDRAFT_01g036150 [Sorghum bicolor]
          Length = 558

 Score =  306 bits (783), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 159/422 (37%), Positives = 254/422 (60%), Gaps = 6/422 (1%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           A+    RI   P++ER+ + D + +D    +VSD+ND+L AL    +  TAV  F    +
Sbjct: 115 ARDCAKRIMELPVEERVKVLDLLPRDDDALTVSDYNDILSALARAGDHATAVALFR---A 171

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
             +AP++ +F+  ++C C +    EA+  ID M   G+ P+V TF+ +V  LCK GR+ +
Sbjct: 172 MPVAPDAQSFATAVQCLCRQGAPDEAKLAIDEMVARGFRPSVATFSAVVGCLCKRGRVTK 231

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A+EV D M  +GC+P I++YN L+ GLCYVGR+EEA ++L  +K+  + PD+YT+T V+D
Sbjct: 232 AMEVFDAMRALGCEPTIRSYNSLVGGLCYVGRLEEALDLLNKLKDSPMTPDIYTFTIVLD 291

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN--C 291
           GFCKVGR+ EA  + ++AI  G++P + T+N L NG+CKEG P+K   LL  M   +  C
Sbjct: 292 GFCKVGRTEEATAIFHDAIGMGLSPTIFTYNALLNGHCKEGNPLKAFALLMEMCGNDAAC 351

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            PDKIS+  +L  LL+ G+   A   +K M R GFEVD R +++L+RGL  +   +   L
Sbjct: 352 PPDKISFGIVLTALLRAGETSAAWQTYKRMERAGFEVDGRALDTLVRGLFRRCATDVSAL 411

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
            DA +VF K+          TY ++ + L +G + D A+  L   +  G+  R   + +V
Sbjct: 412 GDAKEVFAKVVASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRKGYALRKRAYTDV 471

Query: 412 IQALCGEGK-IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           ++ALC  G+ +D   +L+ +M     +P R +++ L+ +L +  +  DA A+Y AA+K+G
Sbjct: 472 VRALCDRGRALDALQVLVLVMIVRDFVPGRNAFEALLGELSRQGRWADAMAVYAAAVKRG 531

Query: 471 VI 472
           V+
Sbjct: 532 VV 533


>gi|125586172|gb|EAZ26836.1| hypothetical protein OsJ_10752 [Oryza sativa Japonica Group]
          Length = 523

 Score =  305 bits (780), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 153/415 (36%), Positives = 241/415 (58%), Gaps = 24/415 (5%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           RI   P++ER+ + D +++D    +VSD+ND+L AL M  + ++AV  F      G+ P+
Sbjct: 103 RIMGLPVEERVKVLDLLQRDDGALTVSDYNDILSALAMAGDHDSAVALFRALRPNGVTPD 162

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           + +++  ++C C K    EA++ +D M   G+ P V TF+ +V  LCK GR+  A+EV D
Sbjct: 163 AQSYATAVQCLCRKGAPDEAKEALDEMVARGFRPTVATFSAVVGCLCKRGRVTRAMEVFD 222

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK-PDVYTYTAVMDGFCKV 238
            M  +GC+P I+TYN L+ GLCYVGR+EEA ++L  +K    + PD+YT+T V+DGFCKV
Sbjct: 223 TMRAVGCEPTIRTYNSLIGGLCYVGRLEEALDLLNKLKESPKQTPDIYTFTIVLDGFCKV 282

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKIS 297
           GR++EA  + ++A+  G++P + T+N L NG+CKEG P+K   LL ++     C PD+IS
Sbjct: 283 GRTDEATPIFHDAVRNGLSPTIFTYNALLNGHCKEGNPLKAYSLLMEMCGNAACPPDRIS 342

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           +S +L  LL+ G+   A   +K M R GFE D R +++L RGLC +       L DA + 
Sbjct: 343 FSIVLQALLRAGETSAAWQAYKRMERAGFEADGRALDTLARGLCRQCAANVAALADARE- 401

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
                                 L +G + D A+  L      G+  R   + +V++ALC 
Sbjct: 402 ---------------------ALARGGEVDAAVSLLGEMARRGYALRKRAYTDVVRALCE 440

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            G+   AL +L L+     +P R ++D L+ +L +  +  DA A+Y AA+K+GV+
Sbjct: 441 RGRARDALRVLALVIARDFVPGRNAFDALLGELARQGRWPDAMAVYAAAVKRGVL 495


>gi|255575578|ref|XP_002528689.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531861|gb|EEF33678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 271

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 126/220 (57%), Positives = 168/220 (76%)

Query: 41  ESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNE 100
           ES+        LQ ++ +D I+A P K R +I D   KDG   S+SDFNDLLMALV+ NE
Sbjct: 43  ESVKFDAKASRLQVEKLLDAIRALPFKGRTEILDVFGKDGEIPSISDFNDLLMALVIANE 102

Query: 101 QETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
            + A+  +S+ S+ GL P+SWTFSI+IRC+C +ND  EA++V+D M +NG +PNV TFT 
Sbjct: 103 LDLALNMYSDVSTLGLVPDSWTFSIVIRCHCKRNDADEAKRVLDRMLENGLNPNVVTFTT 162

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+NS CK G+L++A EV+D M  IGC+PN+QTYNCLLKGLCY+G+VEEAYE+L ++K   
Sbjct: 163 LINSFCKKGKLQKAYEVIDVMNTIGCQPNVQTYNCLLKGLCYIGKVEEAYEILEDIKKSS 222

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           ++PD+YTYTA+MDGFCKVGRS EAM+LLNEAIE  +T ++
Sbjct: 223 IEPDIYTYTAMMDGFCKVGRSEEAMQLLNEAIEMELTDDI 262



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 2/184 (1%)

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           E+LD  G+ G  P+I  +N LL  L     ++ A  M  +V   GL PD +T++ V+   
Sbjct: 73  EILDVFGKDGEIPSISDFNDLLMALVIANELDLALNMYSDVSTLGLVPDSWTFSIVIRCH 132

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK   ++EA  +L+  +E G+ PNVVTF TL N +CK+G   K   ++ +M    C P+ 
Sbjct: 133 CKRNDADEAKRVLDRMLENGLNPNVVTFTTLINSFCKKGKLQKAYEVIDVMNTIGCQPNV 192

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLED 353
            +Y+ LL GL   GK+  A  I +++ +   E D     +++ G C   +S E   LL +
Sbjct: 193 QTYNCLLKGLCYIGKVEEAYEILEDIKKSSIEPDIYTYTAMMDGFCKVGRSEEAMQLLNE 252

Query: 354 AYQV 357
           A ++
Sbjct: 253 AIEM 256



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 101/194 (52%), Gaps = 1/194 (0%)

Query: 137 FEAR-KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           F+ R +++D    +G  P+++ F  L+ +L  +  L  AL +   +  +G  P+  T++ 
Sbjct: 68  FKGRTEILDVFGKDGEIPSISDFNDLLMALVIANELDLALNMYSDVSTLGLVPDSWTFSI 127

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           +++  C     +EA  +L  +  +GL P+V T+T +++ FCK G+  +A E+++     G
Sbjct: 128 VIRCHCKRNDADEAKRVLDRMLENGLNPNVVTFTTLINSFCKKGKLQKAYEVIDVMNTIG 187

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             PNV T+N L  G C  G   +   +L+ +KK +  PD  +Y+ +++G  K G+   A+
Sbjct: 188 CQPNVQTYNCLLKGLCYIGKVEEAYEILEDIKKSSIEPDIYTYTAMMDGFCKVGRSEEAM 247

Query: 316 SIFKEMVRFGFEVD 329
            +  E +      D
Sbjct: 248 QLLNEAIEMELTDD 261



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%)

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           V D  T+ IVIR   K    DEA   L   +E G  P  +TF  +I + C +GK+ KA  
Sbjct: 119 VPDSWTFSIVIRCHCKRNDADEAKRVLDRMLENGLNPNVVTFTTLINSFCKKGKLQKAYE 178

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++ +M      P+  +Y+ L+  L  + K  +A  +     K  + P
Sbjct: 179 VIDVMNTIGCQPNVQTYNCLLKGLCYIGKVEEAYEILEDIKKSSIEP 225



 Score = 38.5 bits (88), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 38/194 (19%), Positives = 91/194 (46%), Gaps = 6/194 (3%)

Query: 276 PMKG-VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
           P KG   +L +  K   +P    ++ LL  L+   ++  A++++ ++   G   D    +
Sbjct: 67  PFKGRTEILDVFGKDGEIPSISDFNDLLMALVIANELDLALNMYSDVSTLGLVPDSWTFS 126

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            ++R  C     +++  ++A +V ++M +     +  T+  +I +  K  K  +A   + 
Sbjct: 127 IVIRCHC-----KRNDADEAKRVLDRMLENGLNPNVVTFTTLINSFCKKGKLQKAYEVID 181

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
               +G  P   T+N +++ LC  GK+++A  +L  + + +  P   +Y  ++    ++ 
Sbjct: 182 VMNTIGCQPNVQTYNCLLKGLCYIGKVEEAYEILEDIKKSSIEPDIYTYTAMMDGFCKVG 241

Query: 455 KSYDACALYGAALK 468
           +S +A  L   A++
Sbjct: 242 RSEEAMQLLNEAIE 255


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 144/434 (33%), Positives = 247/434 (56%), Gaps = 7/434 (1%)

Query: 46  KENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSD--FNDLLMALVMLNEQET 103
           +E  RS+     +   ++   KE ++ F+ +K+ G    + D  +N +L++LV   + + 
Sbjct: 247 REITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDM 306

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F++  + G++ N+ T++ MI+C+  K    +A K++D M  N Y P+V T+TI+++
Sbjct: 307 AENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVIS 366

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK   +++A  VL +M   GC+PNI TYN L++GLC V R EEA E++  ++  G+ P
Sbjct: 367 ALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPP 426

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           ++YTYT +  G CK+ R + A E+ NEA+ RG+ PN VT+NTL NGYC+    ++ + +L
Sbjct: 427 NIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDIL 486

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           K M + +C PD ++Y+TL+ GL++  ++  A+ +  EM   G++V+   +N L RGL   
Sbjct: 487 KEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARV 546

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                   +DA   + +M  +        Y + I  L    + +EA   L+  I  G+ P
Sbjct: 547 GNH-----KDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSP 601

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
              T+N +I+  C +G++D A  +L  M E+   P   SY++LI +     ++ DA  LY
Sbjct: 602 NLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLY 661

Query: 464 GAALKQGVIPQRKP 477
             AL++GV+   KP
Sbjct: 662 ATALERGVVLNPKP 675



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 106/473 (22%), Positives = 189/473 (39%), Gaps = 70/473 (14%)

Query: 71  DIFDSIKKDGTNWSVSDFND--LLMALVMLNEQETAVKFFSEASSY-GLAPNSWTFSIMI 127
           D ++ ++ +  N    D N   ++  L +  + + A++FF  A    G   N+  +  MI
Sbjct: 164 DQWECLQDNFLNSMAQDLNPDAVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMI 223

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                   F E + ++  M   G     +     V S  +SGR KE+LE  + M  +G +
Sbjct: 224 DILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYE 283

Query: 188 PNI--QTYNCLLKGL---------------------------------CYV--GRVEEAY 210
           P +    YN +L  L                                 C+    ++E+A 
Sbjct: 284 PGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAM 343

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           ++L ++  +   PDV TYT V+   CK     +A  +L +  E G  PN+ T+N L  G 
Sbjct: 344 KLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGL 403

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C    P + + L+ LM++    P+  +Y+ L +GL K  ++  A  +F E +  G + + 
Sbjct: 404 CAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNR 463

Query: 331 RMMNSLLRGLC-----------MKSWEEKDL-------------------LEDAYQVFEK 360
              N+LL G C           +K   + D                    L DA ++ ++
Sbjct: 464 VTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDE 523

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  K    +  T  I+ R L +     +A I      + G       +   I  L   G+
Sbjct: 524 MENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGE 583

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +++A  LL+ M      P+ T+Y+ +I    +  +  DA A+    ++ G+ P
Sbjct: 584 MEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGP 636


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 145/448 (32%), Positives = 222/448 (49%), Gaps = 41/448 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E + IFD   K G    V  +N L+      ++ + A +      S  L P+  
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS-GRLKEALEVLDQ 180
           T++ ++   C      EAR +I    D G+ PNV T++ L++ LC+   RL+ A ++L++
Sbjct: 192 TYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEK 248

Query: 181 MGRIGCKPNI-----------------------------------QTYNCLLKGLCYVGR 205
           M   GCKP+I                                    TYN L+ GL    R
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDR 308

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           V EA+E+   +   GL+PD  TYT  +DG CK GR  +A+ +L +  E+G  P+VV+ N 
Sbjct: 309 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 368

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + NG CKE    +   LL  M+ + C P+ IS++TL+ G  + GK + A++ FKEM++ G
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            +      N L+ GLC    E +  +++A  +F+ M +K  V D  TY  +I  LGK  K
Sbjct: 429 VKPTVVTYNILVDGLCKARQEGR--IKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 486

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+A   L      G IP   T+N++I  LCG  K+D+AL L   M E   +P   +Y  
Sbjct: 487 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGT 546

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           +I+ L + E    A AL+  +L+ GV+P
Sbjct: 547 IISALCKQEMVDKALALFDGSLEAGVVP 574



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 208/390 (53%), Gaps = 9/390 (2%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +S FN  +  L   +    A   F     +G  PN  T++ ++   CN     +A+ + +
Sbjct: 50  ISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYE 109

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   GY P+V T+  L++  CK G+L EAL++ D   + G  P++ TYN L+ G C   
Sbjct: 110 RMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKAD 169

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +++EA  +L  + ++ L PDV TY ++++G CK GR +EA  L+   +++G +PNV+T++
Sbjct: 170 KLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYS 226

Query: 265 TLFNGYCKEGTPMKGV-GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           TL +G C+E   ++    LL+ M    C PD +SY+ L++GL +   +  A+ +F  ++R
Sbjct: 227 TLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLR 286

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G+E +    N L+ GL      ++D + +A+++F  + K     D  TY + I  L K 
Sbjct: 287 QGYEPEVPTYNILIDGLL-----KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 341

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + ++AL+ L    E G +P  ++ N VI  LC E ++D+A +LL  M      P+  S+
Sbjct: 342 GRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISF 401

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + LI    +  K   A   +   LK+GV P
Sbjct: 402 NTLICGQCRAGKWKKAMTTFKEMLKRGVKP 431



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 187/353 (52%), Gaps = 8/353 (2%)

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
           +G    +  +N L+  L        A+K F      G  P   T++I+I     ++   E
Sbjct: 252 NGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNE 311

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A ++   +  +G  P+  T+T+ ++ LCK+GR+++AL +L  M   GC P++ ++N ++ 
Sbjct: 312 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 371

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC   RV+EA  +L  ++  G  P+  ++  ++ G C+ G+  +AM    E ++RGV P
Sbjct: 372 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 431

Query: 259 NVVTFNTLFNGYCK---EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
            VVT+N L +G CK   EG   + + L   M ++  +PD ++YS L++GL K GK+  A 
Sbjct: 432 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDAR 491

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +   M   G   +    NSL+ GLC       D +++A ++F  M +K  V D  TYG 
Sbjct: 492 RLLGAMEAKGCIPNVYTYNSLISGLC-----GLDKVDEALELFVAMVEKGCVPDTITYGT 546

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +I  L K +  D+AL     ++E G +P +  + ++I  LC   ++D+AL LL
Sbjct: 547 IISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLL 599



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 206/416 (49%), Gaps = 12/416 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +AS + +   +FD ++K G   +   +N LL  L        A   +      G +P+  
Sbjct: 62  RASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVV 121

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  +C      EA K+ D     G+ P+V T+  L+N  CK+ +L EA  +L +M
Sbjct: 122 TYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 181

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK-VGR 240
                 P++ TYN L+ GLC  GRV+EA    M + + G  P+V TY+ ++ G C+ + R
Sbjct: 182 VSESLVPDVVTYNSLVNGLCKNGRVDEAR---MLIVDKGFSPNVITYSTLISGLCRELRR 238

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A +LL + +  G  P++V++N L +G  +E    + + L   + ++   P+  +Y+ 
Sbjct: 239 LESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNI 298

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GLLK  ++  A  +F  +V+ G E D       + GLC     +   +EDA  + + 
Sbjct: 299 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC-----KAGRVEDALLMLKD 353

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +K  V D  ++  VI  L K K+ DEA + L      G  P  I+FN +I   C  GK
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 413

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYGAALKQGVIP 473
             KA+     M +    P+  +Y++L+    K  Q  +  +A  L+ A +++G +P
Sbjct: 414 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 469



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 188/357 (52%), Gaps = 8/357 (2%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           +P+++T  I++R         +A + ++ +   G   +++TF I ++ LC++ R+ +A  
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQT 71

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           V D M + G  PN  TYN LL GLC  GR+ +A  +   +   G  PDV TY  ++ GFC
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           KVG+ +EA+++ + A++RG  P+VVT+N L NG+CK     +   +L+ M   + +PD +
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y++L+NGL K G++  A  +   +V  GF  +    ++L+ GLC     E   LE A Q
Sbjct: 192 TYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLC----RELRRLESARQ 244

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           + EKM       D  +Y  +I  L + +   EAL      +  G+ P   T+N +I  L 
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLL 304

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            E ++++A  L   + +H   P   +Y + I  L +  +  DA  +     ++G +P
Sbjct: 305 KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 361



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 137/284 (48%), Gaps = 3/284 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   + E  ++F  + K G       +   +  L      E A+    +    G  P+ 
Sbjct: 304 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 363

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            + + +I   C +    EA  ++  M   G  PN  +F  L+   C++G+ K+A+    +
Sbjct: 364 VSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKE 423

Query: 181 MGRIGCKPNIQTYNCLLKGLCYV---GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           M + G KP + TYN L+ GLC     GR++EA  +   +   G  PDV TY+A++DG  K
Sbjct: 424 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 483

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G+ ++A  LL     +G  PNV T+N+L +G C      + + L   M ++ C+PD I+
Sbjct: 484 AGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTIT 543

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           Y T+++ L K   +  A+++F   +  G      M  SL+ GLC
Sbjct: 544 YGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLC 587



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 155/325 (47%), Gaps = 45/325 (13%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           Y P+  T  IL+ SL KSG++++A   ++Q+              L+KGLC         
Sbjct: 12  YSPDAYTVGILLRSLLKSGKIEKAHRFVEQL--------------LVKGLC--------- 48

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
                        D+ T+   + G C+  R  +A  + +   + G  PN +T+N L +G 
Sbjct: 49  -------------DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGL 95

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C  G       L + M K    PD ++Y+TLL+G  K GK+  A+ IF   V+ GF  D 
Sbjct: 96  CNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDV 155

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N+L+ G C     + D L++A ++ ++M  +  V D  TY  ++  L K  + DEA 
Sbjct: 156 VTYNALINGFC-----KADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEAR 210

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGE-GKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           + +   ++ G  P  IT++ +I  LC E  +++ A  LL  M  +   P   SY+ LI  
Sbjct: 211 MLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHG 267

Query: 450 LDQLEKSYDACALYGAALKQGVIPQ 474
           L + +   +A  L+G+ L+QG  P+
Sbjct: 268 LAREQGVSEALKLFGSVLRQGYEPE 292



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 156/321 (48%), Gaps = 12/321 (3%)

Query: 11  IFTNTNRRNHN-KIPQFNKLVVFAAASLSTAESLDLKEN-------PRSLQAQRFVDRI- 61
           +F +  R+ +  ++P +N L+          E+ +L          P ++    F+D + 
Sbjct: 280 LFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC 339

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++ + +   + + G    V   N ++  L      + A    S   + G +PN+ 
Sbjct: 340 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI 399

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS---GRLKEALEVL 178
           +F+ +I   C    + +A      M   G  P V T+ ILV+ LCK+   GR+KEA+ + 
Sbjct: 400 SFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLF 459

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D M   G  P++ TY+ L+ GL   G++++A  +L  ++  G  P+VYTY +++ G C +
Sbjct: 460 DAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGL 519

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
            + +EA+EL    +E+G  P+ +T+ T+ +  CK+    K + L     +   +P    Y
Sbjct: 520 DKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMY 579

Query: 299 STLLNGLLKWGKIRPAVSIFK 319
            +L++GL    ++  A+ + +
Sbjct: 580 FSLIDGLCAVARVDEALKLLQ 600


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/388 (34%), Positives = 205/388 (52%), Gaps = 6/388 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E + IFD   K G    V  +N L+      ++ + A +      S  L P+  
Sbjct: 57  KVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVV 116

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR-LKEALEVLDQ 180
           T++ ++   C      EAR +I    D G+ PNV T++ L++ LC+  R + EAL++   
Sbjct: 117 TYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGS 173

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           + + G +P + TYN L+ GL    RV EA+E+   +   GL+PD  TYT  +DG CK GR
Sbjct: 174 VLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 233

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A+ +L +  E+G  P+VV+ N + NG CKE    +   LL  M+ + C P+ IS++T
Sbjct: 234 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 293

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+ G  + GK + A++ FKEM++ G +      N L+ GLC    E +  +++A  +F+ 
Sbjct: 294 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGR--IKEAITLFDA 351

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +K  V D  TY  +I  LGK  K D+A   L      G IP   T+N++I  LCG  K
Sbjct: 352 MIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEK 411

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           +D+AL L   M E   +P   +Y  +I+
Sbjct: 412 VDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 197/368 (53%), Gaps = 18/368 (4%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           +G  PN  T++ ++   CN     +A+ + + M   GY P+V T+  L++  CK G L E
Sbjct: 4   HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDE 63

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           AL++ D   + G  P++ TYN L+ G C   +++EA  +L  + ++ L PDV TY ++++
Sbjct: 64  ALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVN 123

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG-LLKLMK---KR 289
           G CK GR +EA  L+   +++G +PNV+T++TL +G C+E   ++GV   LKL     K+
Sbjct: 124 GLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRE---LRGVSEALKLFGSVLKQ 177

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P+  +Y+ L++GLLK  ++  A  +F  +V+ G E D       + GLC     +  
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC-----KAG 232

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            +EDA  + + M +K  V D  ++  VI  L K K+ DEA + L      G  P  I+FN
Sbjct: 233 RVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFN 292

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYGAA 466
            +I   C  GK  KA+     M +    P+  +Y++L+    K  Q  +  +A  L+ A 
Sbjct: 293 TLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAM 352

Query: 467 LKQGVIPQ 474
           +++G +P 
Sbjct: 353 IEKGRVPD 360



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 177/329 (53%), Gaps = 9/329 (2%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M  +G+ PN  T+  L++ LC  GR+ +A  + ++M + G  P++ TYN LL G C VG 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++EA ++       G  PDV TY A+++GFCK  + +EA  +L   +   + P+VVT+N+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK-IRPAVSIFKEMVRF 324
           L NG CK G   +      L+  +   P+ I+YSTL++GL +  + +  A+ +F  +++ 
Sbjct: 121 LVNGLCKNGRVDEA---RMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G+E +    N L+ GL      ++D + +A+++F  + K     D  TY + I  L K  
Sbjct: 178 GYEPEVPTYNILIDGLL-----KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG 232

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + ++AL+ L    E G +P  ++ N VI  LC E ++D+A +LL  M      P+  S++
Sbjct: 233 RVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFN 292

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            LI    +  K   A   +   LK+GV P
Sbjct: 293 TLICGQCRAGKWKKAMTTFKEMLKRGVKP 321



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 3/246 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   + E  ++F  + K G       +   +  L      E A+    +    G  P+ 
Sbjct: 194 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 253

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            + + +I   C +    EA  ++  M   G  PN  +F  L+   C++G+ K+A+    +
Sbjct: 254 VSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKE 313

Query: 181 MGRIGCKPNIQTYNCLLKGLCYV---GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           M + G KP + TYN L+ GLC     GR++EA  +   +   G  PDV TY+A++DG  K
Sbjct: 314 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 373

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G+ ++A  LL     +G  PNV T+N+L +G C      + + L   M ++ C+PD I+
Sbjct: 374 AGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTIT 433

Query: 298 YSTLLN 303
           Y T+++
Sbjct: 434 YGTIIS 439



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 103/190 (54%), Gaps = 9/190 (4%)

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M+K    P++I+Y+ LL+GL   G++  A ++++ M++ G+  D    N+LL G C K  
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC-KVG 59

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
           E    L++A ++F+   K+  V D  TY  +I    K  K DEA   L   +    +P  
Sbjct: 60  E----LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDV 115

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL-DQLEKSYDACALYG 464
           +T+N+++  LC  G++D+A +L+    +    P+  +Y  LI+ L  +L    +A  L+G
Sbjct: 116 VTYNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFG 172

Query: 465 AALKQGVIPQ 474
           + LKQG  P+
Sbjct: 173 SVLKQGYEPE 182



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/99 (22%), Positives = 47/99 (47%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE I +FD++ + G    V  ++ L+  L    + + A +      + G  PN +T++ 
Sbjct: 342 IKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNS 401

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
           +I   C      EA ++   M + G  P+  T+  ++++
Sbjct: 402 LISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 197/364 (54%), Gaps = 5/364 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV++F   L +     +  T V   ++   +G+  N ++ +++I C C  N    A  ++
Sbjct: 87  SVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSIL 146

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             MF  G HP  +TF  L+N LC  G++KEA+E+ ++M R G +PN+ +YN ++ GLC  
Sbjct: 147 GKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKT 206

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A ++   ++ +G KPDV TY  ++D  CK    N+AME L+E ++RG+ PNV T+
Sbjct: 207 GNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTY 266

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N + +G+C  G   +   L K M  R+ +PD ++ + L++GL K G +  A  +F+ M  
Sbjct: 267 NCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTE 326

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E +    N+L+ G C++      L+ +A +VFE M ++       +Y I+I    K 
Sbjct: 327 KGVEPNISTYNALMDGYCLQR-----LMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKS 381

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           ++ DEA   L         P T+T++ ++Q LC  G+  +AL +   M  +  +P+  +Y
Sbjct: 382 RRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTY 441

Query: 444 DMLI 447
            +L+
Sbjct: 442 SILL 445



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 193/394 (48%), Gaps = 5/394 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   +V   N L+  L  LN  + AV    +    G+ P + TF+ +I   CN+    EA
Sbjct: 118 GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEA 177

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            ++ + M   G+ PNV ++  ++N LCK+G    A++V  +M + GCKP++ TYN ++  
Sbjct: 178 VELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDS 237

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC    V +A E L  + + G+ P+V+TY  ++ GFC +G+ NEA  L  E + R V P+
Sbjct: 238 LCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD 297

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VT   L +G CKEG   +   + + M ++   P+  +Y+ L++G      +  A  +F+
Sbjct: 298 TVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFE 357

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            M+R G        N L+ G C KS      +++A  +  +M  K    D  TY  +++ 
Sbjct: 358 IMIRQGCAPGVHSYNILINGFC-KSRR----MDEAKSLLAEMYHKALNPDTVTYSTLMQG 412

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           L +  +  EAL         G +P  +T++ ++   C  G +D+AL LL  M E    P+
Sbjct: 413 LCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPN 472

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              + +LI  +    K   A  L+      G+ P
Sbjct: 473 IVHHTILIEGMFIAGKLEVAKELFSKLFADGIRP 506



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 194/404 (48%), Gaps = 5/404 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + I   + K G + + S FN L+  L    + + AV+ F+E    G  PN  +++ +I  
Sbjct: 143 VSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIING 202

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C   +   A  V   M  NG  P+V T+  +++SLCK   + +A+E L +M   G  PN
Sbjct: 203 LCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPN 262

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TYNC++ G C +G++ EA  +   +    + PD  T T ++DG CK G  +EA  +  
Sbjct: 263 VFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFE 322

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
              E+GV PN+ T+N L +GYC +    +   + ++M ++ C P   SY+ L+NG  K  
Sbjct: 323 TMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSR 382

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A S+  EM       D    ++L++GLC          ++A  +F++M     + +
Sbjct: 383 RMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRP-----KEALNIFKEMCSYGLLPN 437

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY I++    K    DEAL  L    E    P  +    +I+ +   GK++ A  L  
Sbjct: 438 LVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFS 497

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++     P+  +Y ++I  L +   S +A  L+      G +P
Sbjct: 498 KLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 541



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 189/397 (47%), Gaps = 5/397 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE +++F+ + + G   +V  +N ++  L        AV  F +    G  P+  T++ 
Sbjct: 174 IKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNT 233

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A + +  M D G  PNV T+  +V+  C  G+L EA  +  +M    
Sbjct: 234 IIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD 293

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  T   L+ GLC  G V EA  +   +   G++P++ TY A+MDG+C     NEA 
Sbjct: 294 VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAK 353

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++    I +G  P V ++N L NG+CK     +   LL  M  +   PD ++YSTL+ GL
Sbjct: 354 KVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 413

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            ++G+ + A++IFKEM  +G   +    + LL G C         L++A ++ + M +K 
Sbjct: 414 CQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGH-----LDEALKLLKSMQEKK 468

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +   + I+I  +    K + A          G  P   T+  +I+ L  EG  D+A 
Sbjct: 469 LEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAY 528

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
            L   M +   +P+  SY+++I    Q + S  A  L
Sbjct: 529 DLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 565



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 138/275 (50%), Gaps = 1/275 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     VD + K   + E   +F+++ + G   ++S +N L+    +      A K 
Sbjct: 296 PDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKV 355

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F      G AP   +++I+I  +C      EA+ ++  M+    +P+  T++ L+  LC+
Sbjct: 356 FEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 415

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            GR KEAL +  +M   G  PN+ TY+ LL G C  G ++EA ++L +++   L+P++  
Sbjct: 416 FGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVH 475

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           +T +++G    G+   A EL ++    G+ P + T+  +  G  KEG   +   L + M+
Sbjct: 476 HTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKME 535

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
               LP+  SY+ ++ G L+      A+ +  EMV
Sbjct: 536 DDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 570



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 106/207 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  + E   +   +     N     ++ L+  L      + A+  F E  SYGL PN  
Sbjct: 380 KSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLV 439

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI++  +C      EA K++  M +    PN+   TIL+  +  +G+L+ A E+  ++
Sbjct: 440 TYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKL 499

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P I+TY  ++KGL   G  +EAY++   +++DG  P+  +Y  ++ GF +   S
Sbjct: 500 FADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDS 559

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFN 268
           + A+ L++E + +  + N+ TF  L +
Sbjct: 560 STAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 115/238 (48%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   +F+ + + G    V  +N L+         + A    +E     L P++ T+S 
Sbjct: 349 MNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYST 408

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C      EA  +   M   G  PN+ T++IL++  CK G L EAL++L  M    
Sbjct: 409 LMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKK 468

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PNI  +  L++G+   G++E A E+   +  DG++P + TYT ++ G  K G S+EA 
Sbjct: 469 LEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAY 528

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           +L  +  + G  PN  ++N +  G+ +       + L+  M  +    +  ++  LL+
Sbjct: 529 DLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 221/439 (50%), Gaps = 49/439 (11%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            V   + + L E   + + +K+ G       +N LL  L   N+ E   K   E    G 
Sbjct: 169 IVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGR 228

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK--------- 167
            P++++++ ++ C C    + EA K+++ M +    P+V T+  L++  CK         
Sbjct: 229 EPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAER 288

Query: 168 --------------------------SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
                                     + RL +A  V++ M + G  P++ TYNCLL GLC
Sbjct: 289 LLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC 348

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G++EEA+E+L  +      PDV TY+ +++G CK+G+ ++A  LL   +ERG  PN+V
Sbjct: 349 KAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLV 408

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           TFNT+ +G+CK G   +G  +L+LMK+ +C PD ++YSTL++G  K  +++ A +I    
Sbjct: 409 TFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL--- 465

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G   D+   +S+L GLC         +E+A +V + MTK+        Y ++I  L 
Sbjct: 466 ---GISPDKASYSSMLEGLCSTGK-----VEEAQEVMDLMTKQGCPPTSSHYALIIGGLC 517

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
             ++ DEAL  L    E G  P   T++ +I  LC   +++ A+ +L +M E   +P   
Sbjct: 518 DVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVA 577

Query: 442 SYDMLI---TKLDQLEKSY 457
           +Y  LI    K+++++ +Y
Sbjct: 578 TYTSLIDGFCKINKMDAAY 596



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 187/374 (50%), Gaps = 5/374 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  L      + A +   E       P++  ++ +I   C       AR V+  M +  
Sbjct: 98  LIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS 157

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             P+V T+T L+   C++  L EA +++++M   G  P+   YN LL GLC   ++EE  
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVS 217

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           ++L  +   G +PD ++Y  V+   C+ G+  EA ++L + IE+   P+VVT+N+L +G+
Sbjct: 218 KLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGF 277

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK     +   LL+ M  R C P  I+Y+TL+ G  +  ++  A  + ++M + G   D 
Sbjct: 278 CKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDL 337

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N LL GLC         LE+A+++ E M +K    D  TY I++  L K  K D+A 
Sbjct: 338 VTYNCLLDGLCKAGK-----LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDAR 392

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           + L   +E G  P  +TFN +I   C  GK+D+   +L LM E +  P   +Y  LI   
Sbjct: 393 LLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGY 452

Query: 451 DQLEKSYDACALYG 464
            +  +  DA A+ G
Sbjct: 453 CKANRMQDAFAILG 466



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 207/390 (53%), Gaps = 13/390 (3%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +  L++     N  + A K   +    GL P++  ++ ++   C +N   E  K+++
Sbjct: 162 VITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLE 221

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M + G  P+  ++  +V  LC+SG+ +EA ++L++M    C P++ TYN L+ G C V 
Sbjct: 222 EMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVS 281

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +++EA  +L ++      P V TYT ++ GF +  R  +A  ++ +  + G++P++VT+N
Sbjct: 282 KMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYN 341

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +G CK G   +   LL++M +++C PD ++YS L+NGL K GK+  A  + + M+  
Sbjct: 342 CLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLER 401

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT-DPGTYGIVIRTLGKG 383
           G + +    N+++ G C         +++ ++V E M K+VS T D  TY  +I    K 
Sbjct: 402 GCQPNLVTFNTMIDGFCKAGK-----VDEGHKVLELM-KEVSCTPDVVTYSTLIDGYCKA 455

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            +  +A   L      G  P   +++++++ LC  GK+++A  ++ LM +    P+ + Y
Sbjct: 456 NRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHY 509

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++I  L  +E+  +A  +     ++G  P
Sbjct: 510 ALIIGGLCDVERGDEALKMLQVMSERGCEP 539



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 178/357 (49%), Gaps = 11/357 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L +   + + + K G +  +  +N LL  L    + E A +          AP+  
Sbjct: 314 RADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVV 373

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI++   C      +AR +++ M + G  PN+ TF  +++  CK+G++ E  +VL+ M
Sbjct: 374 TYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELM 433

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             + C P++ TY+ L+ G C   R+++A+ +L      G+ PD  +Y+++++G C  G+ 
Sbjct: 434 KEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKV 487

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA E+++   ++G  P    +  +  G C      + + +L++M +R C P+  +YS L
Sbjct: 488 EEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSIL 547

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K  ++  A+++   M+  G   D     SL+ G C     + + ++ AYQ F+ M
Sbjct: 548 INGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFC-----KINKMDAAYQCFKTM 602

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
                  D   Y I+I    +    ++A+  +   +E G  P   T+ +++++L  E
Sbjct: 603 RDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 162/338 (47%), Gaps = 13/338 (3%)

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           FF  R      F +   P+ +T+  L+    ++G  K  LE+ ++M      P++ T+N 
Sbjct: 11  FFRER------FSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNT 64

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           +LK  C +G ++ A             P  +TY  ++ G C+  R +EA +LL+E I++ 
Sbjct: 65  ILKAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKD 122

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             P+   +N L  G CK G       +LK+M +R+C+PD I+Y++L+ G  +   +  A 
Sbjct: 123 CHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEAR 182

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            + ++M   G   D    N+LL GLC     +++ LE+  ++ E+M +     D  +Y  
Sbjct: 183 KLMEKMKESGLTPDTVAYNALLNGLC-----KQNQLEEVSKLLEEMVEAGREPDTFSYNT 237

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           V+  L +  K +EA   L   IE    P  +T+N+++   C   K+D+A  LL  M    
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             P+  +Y  LI    + ++  DA  +     K G+ P
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISP 335



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 127/290 (43%), Gaps = 44/290 (15%)

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R  E Y       +D  KP   TY A++ GF + G S   +E+ NE + R  +P+V+T N
Sbjct: 4   RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63

Query: 265 TLFNGYCKEG---------------TPM------------------KGVGLLKLMKKRNC 291
           T+   YC+ G               +P                   +   LL  M +++C
Sbjct: 64  TILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            PD   Y+ L+ GL K GKI  A ++ K M+      D     SL+ G C     + + L
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCC-----QTNAL 178

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           ++A ++ EKM +     D   Y  ++  L K  + +E    L   +E G  P T ++N V
Sbjct: 179 DEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTV 238

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML------ITKLDQLEK 455
           +  LC  GK ++A  +L  M E    P   +Y+ L      ++K+D+ E+
Sbjct: 239 VACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAER 288



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 9/199 (4%)

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
           P++G    +        P   +Y  L+ G  + G  +  + I  EM+   F  D    N+
Sbjct: 5   PLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNT 64

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG-TYGIVIRTLGKGKKTDEALIHLH 394
           +L+  C         + D  +       K+  +    TY I+I  L + ++ DEA   L 
Sbjct: 65  ILKAYCQ--------IGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLD 116

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
             I+    P    +N +I  LC  GKID A  +L +M E + +P   +Y  LI    Q  
Sbjct: 117 EMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTN 176

Query: 455 KSYDACALYGAALKQGVIP 473
              +A  L     + G+ P
Sbjct: 177 ALDEARKLMEKMKESGLTP 195


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 196/364 (53%), Gaps = 5/364 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV +F   L +     +  T V   ++   + +  N ++ +I+I C C  N    +  V+
Sbjct: 92  SVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVL 151

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             MF  G HP+  TF  L+N LC  G++KEA+E+ ++M + G +PN+ +Y  ++ GLC  
Sbjct: 152 GKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKT 211

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A ++   ++ +G KP+V TY+ ++D  CK    N+AME L+E +ERG+ PNV T+
Sbjct: 212 GNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTY 271

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N++ +G+C  G   +   L K M  R+ +P+ ++++ L++GL K G +  A  +F+ M  
Sbjct: 272 NSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTE 331

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E D    N+L+ G C++      L+ +A +VFE M +K       +Y I+I    K 
Sbjct: 332 KGVEPDISTYNALMDGYCLQR-----LMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKS 386

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           ++ DEA   L         P T+T++ ++Q LC  G+  +AL L   M  +   P+  +Y
Sbjct: 387 RRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTY 446

Query: 444 DMLI 447
            +L+
Sbjct: 447 VILL 450



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 186/397 (46%), Gaps = 5/397 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE +++F+ + K G   +V  +  ++  L        AV  F +    G  PN  T+S 
Sbjct: 179 IKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYST 238

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A + +  M + G  PNV T+  +V+  C  G+L EA  +  +M    
Sbjct: 239 IIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD 298

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  T+  L+ GLC  G V EA  +   +   G++PD+ TY A+MDG+C     NEA 
Sbjct: 299 VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAK 358

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++    I +G  P   ++N L NGYCK     +   LL  M  +   PD ++YSTL+ GL
Sbjct: 359 KVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 418

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G+ + A+++FKEM  +G   +      LL G C         L++A ++ + M +K 
Sbjct: 419 CQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGH-----LDEALKLLKSMKEKK 473

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +   Y I+I  +    K + A          G  P   T+  +I+ L  EG  D+A 
Sbjct: 474 LEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAY 533

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
            L   M +   +P+  SY+++I    Q + S  A  L
Sbjct: 534 DLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 570



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 192/404 (47%), Gaps = 5/404 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +   + K G +     FN L+  L    + + AV+ F+E    G  PN  +++ +I  
Sbjct: 148 VSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVING 207

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C   +   A  V   M  NG  PNV T++ +++SLCK   + +A+E L +M   G  PN
Sbjct: 208 LCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPN 267

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TYN ++ G C +G++ EA  +   +    + P+  T+T ++DG CK G  +EA  +  
Sbjct: 268 VFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFE 327

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
              E+GV P++ T+N L +GYC +    +   + ++M ++ C P   SY+ L+NG  K  
Sbjct: 328 TMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSR 387

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A S+  EM       D    ++L++GLC          ++A  +F++M       +
Sbjct: 388 RMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRP-----KEALNLFKEMCSYGPHPN 442

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY I++    K    DEAL  L    E    P  + +  +I+ +   GK++ A  L  
Sbjct: 443 LVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFS 502

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++     P   +Y ++I  L +   S +A  L+      G +P
Sbjct: 503 KLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 546



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 156/351 (44%), Gaps = 30/351 (8%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P+V  F   + S  K  +    + + +QM       N+ + N L+  LC +  V+ +  +
Sbjct: 91  PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G+ PD  T+ A+++G C  G+  EA+EL NE ++RG  PNV+++ T+ NG CK
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCK 210

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     V + K M++  C P+ ++YST+++ L K   +  A+    EMV  G   +   
Sbjct: 211 TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270

Query: 333 MNSLLRGLC-----------MKSWEEKD-------------------LLEDAYQVFEKMT 362
            NS++ G C            K    +D                   ++ +A  VFE MT
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMT 330

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +K    D  TY  ++      +  +EA       I  G  P   ++N +I   C   ++D
Sbjct: 331 EKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMD 390

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +A  LL  MY  A  P   +Y  L+  L QL +  +A  L+      G  P
Sbjct: 391 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHP 441



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 142/290 (48%), Gaps = 1/290 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     VD + K   + E   +F+++ + G    +S +N L+    +      A K 
Sbjct: 301 PNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKV 360

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F      G AP + +++I+I  YC      EA+ ++  M+    +P+  T++ L+  LC+
Sbjct: 361 FEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 420

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            GR KEAL +  +M   G  PN+ TY  LL G C  G ++EA ++L ++K   L+P++  
Sbjct: 421 LGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVH 480

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           YT +++G    G+   A EL ++    G  P++ T+  +  G  KEG   +   L + M+
Sbjct: 481 YTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKME 540

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
               LP+  SY+ ++ G L+      A+ +  EMV   F V+      LL
Sbjct: 541 DDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 5/252 (1%)

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +P V  +   +  F K  + +  + L N+     VT NV + N L N  C+       V 
Sbjct: 90  RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +L  M K    PD I+++ L+NGL   GKI+ AV +F EMV+ G E +     +++ GLC
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                       A  VF+KM +     +  TY  +I +L K +  ++A+  L   +E G 
Sbjct: 210 KTGNTSM-----AVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGI 264

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P   T+N+++   C  G++++A  L   M     +P+  ++ +L+  L +     +A  
Sbjct: 265 PPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARL 324

Query: 462 LYGAALKQGVIP 473
           ++    ++GV P
Sbjct: 325 VFETMTEKGVEP 336



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 7/121 (5%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L+   ++F  +  DGT   +  +  ++  L+     + A   F +    G  PNS +
Sbjct: 491 AGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCS 550

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           +++MI+ +    D   A ++ID M    +  N++TF +L++       L+   E++ Q  
Sbjct: 551 YNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD-------LESQDEIISQFM 603

Query: 183 R 183
           R
Sbjct: 604 R 604


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 220/447 (49%), Gaps = 40/447 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA   +E   +F+ +K       V  ++ L+ +L    + E A++  +E  + G  PN W
Sbjct: 21  KAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLW 80

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA------- 174
           T++ ++ C      F EA +++  M DNG  P+V T+  L+++L K+GRL EA       
Sbjct: 81  TYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEM 140

Query: 175 ----------------------------LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
                                       +E+L++M R GC P++ TY+ L+ GL   G  
Sbjct: 141 RERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGET 200

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            +A+++   +K  G KPD  T+TA+MD   K GR ++A+ELL+E  ERGV P VVT+N L
Sbjct: 201 VKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNAL 260

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             G+ K G  ++   LL  MK+  C PD ++YS L+ GL+K  ++  A  + K+M + G 
Sbjct: 261 IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGC 320

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             D    N+L+ GL      +  LL DA ++F++M  K    D  TY  +I  LGK  + 
Sbjct: 321 PPDTITYNTLINGL-----GKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARV 375

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           + A +       +G  P   T+ ++I  L   G++D A  L   M      P   +Y+  
Sbjct: 376 ESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAF 435

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           +  L +  +  +A  ++    + G++P
Sbjct: 436 LNSLGRGGRFKEARKIFEDMKESGLLP 462



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 197/390 (50%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +N LL AL    + E A   F E  +    P+  ++S +I        +  A +V+
Sbjct: 8   NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G  PN+ T+  LV+ L K+G+  EAL +L +M   GC P+++TYNCL+  L   
Sbjct: 68  AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           GR+ EA+ +   ++  G  PD +TY +++ G  KVGRS +AMELL E    G  P+V+T+
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           ++L  G  K+G  +K   L + MK+R   PD I+++ L++ L K G++  A+ +  EM  
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G +      N+L+ G      +  DL+E AY + ++M +     D  TY  +I  L K 
Sbjct: 248 RGVKPGVVTYNALIAGF----GKVGDLVE-AYNLLDEMKRNGCKPDVVTYSCLITGLIKA 302

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + DEA   L    + G  P TIT+N +I  L   G ++ A  L   M      P   +Y
Sbjct: 303 SQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTY 362

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
             LIT L +  +   AC L+      G+ P
Sbjct: 363 STLITALGKAARVESACVLFEEMESVGIQP 392



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 205/428 (47%), Gaps = 30/428 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E   +F  +++ G       +N L+  L  +   + A++   E   +G  P+  
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I       +  +A K+   M   G  P+  TFT L+++L K+GR+ +ALE+LD+M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP + TYN L+ G   VG + EAY +L  +K +G KPDV TY+ ++ G  K  + 
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA ++L +  + G  P+ +T+NTL NG  K G       L   MK + C PD ++YSTL
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTL 365

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVD--------------------ERMMNSLL-RGL 340
           +  L K  ++  A  +F+EM   G + D                    +R+ + +  +GL
Sbjct: 366 ITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGL 425

Query: 341 C---------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
                     + S       ++A ++FE M +   + D  TY  ++  L K K+ D+A  
Sbjct: 426 SPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACG 485

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            L   IE G    ++ F+  ++ L   G +D+A  LL         P  +SY+ LI  L 
Sbjct: 486 LLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALA 545

Query: 452 QLEKSYDA 459
           +  +  +A
Sbjct: 546 KAGRVSEA 553



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 192/403 (47%), Gaps = 6/403 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+     +D + KA  + + +++ D +K+ G    V  +N L+     + +   A   
Sbjct: 217 PDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNL 276

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E    G  P+  T+S +I      +   EA +V+  M   G  P+  T+  L+N L K
Sbjct: 277 LDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGK 336

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G L +A  + D+M   GC P++ TY+ L+  L    RVE A  +   +++ G++PD++T
Sbjct: 337 AGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFT 396

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y +++    K G+ ++A  L +E   +G++P+V+T+N   N   + G   +   + + MK
Sbjct: 397 YCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMK 456

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +   LPD  +Y  LL GL K  ++  A  + KE++  G   D    +  L    + SW  
Sbjct: 457 ESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLE--ILTSWGN 514

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
            D   +A+++ +    K       +Y  +I  L K  +  EA   L    E G  P  ++
Sbjct: 515 VD---EAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVS 571

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++++I AL   G+ID A  LL  M +     S  SY  L+ KL
Sbjct: 572 YSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 125/283 (44%), Gaps = 35/283 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L +   +FD +K  G N  V  ++ L+ AL      E+A   F E  S G+ P+ +
Sbjct: 336 KAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLF 395

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I          +A ++   M   G  P+V T+   +NSL + GR KEA ++ + M
Sbjct: 396 TYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDM 455

Query: 182 GRIGCKPNIQTYNCLLKGLCYV-----------------------------------GRV 206
              G  P++ TY+ LL GL                                      G V
Sbjct: 456 KESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNV 515

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA+E+L    + GL P   +Y A++D   K GR +EA   L +  E+G  P++V++++L
Sbjct: 516 DEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSL 575

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
            +   + G       LL+ M KR       SYS L+  L  WG
Sbjct: 576 ISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 214/398 (53%), Gaps = 12/398 (3%)

Query: 80  GTNWSVSDF---NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
            TN   +DF     L+  L  +   E A+ F  +  S G  P+ +T++ +I   C +N  
Sbjct: 3   ATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRL 62

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            EARK ++ M +    PNV T+T+L++ LCK GR+ EA+ +L +M R  C P   TYN L
Sbjct: 63  HEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSL 121

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           + GLC   R  EAY++L  +   G  PD++TYT ++ GFCK  +S++A+ +  + + RG 
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
            P+VVT++ L +G CKEG   + + L  +++K  +C+P+ ++Y++L++G  + GK+  A+
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
           ++ + M   G   D     +L+ G C  +      L+DAY +  +MT+K    D  T+  
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLAR-----LDDAYDLLNQMTRKGLTPDVVTFTS 296

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           ++  L +  +  +A+  L         P   T+N ++   C   ++++A    F++ E  
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA--RKFMLEEMD 354

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             P+  S++++I  L ++ +S +A  L   A ++   P
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNP 392



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 217/413 (52%), Gaps = 18/413 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +   ++K     +V+ +N L+  L        A     E    G  P+ +
Sbjct: 93  KGGRVDEAVALLSKMRKKCVPTAVT-YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIF 151

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C      +A +V + +   G+ P+V T++ L++ LCK GRLKEA+++  +M
Sbjct: 152 TYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 211

Query: 182 GRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            + G C PN  TYN L+ G C +G+++EA  +L  +   G  PDV TYT +M+GFCK+ R
Sbjct: 212 IKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLAR 271

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++A +LLN+   +G+TP+VVTF +L +G C+E      V +L  M++++C P   +Y+T
Sbjct: 272 LDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNT 331

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLEDAYQVF 358
           +L+G  +  ++  A     E +     V     N ++RGLC   +S E  +L+E+A    
Sbjct: 332 ILDGYCRANQLEEARKFMLEEMDCPPNVVS--FNIMIRGLCKVNRSSEAMELVEEA---- 385

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL-IHLHHAIEMGHIPRTITFNNVIQALCG 417
               ++    D   Y  VI  L + KK DEA  ++     E G +P +IT++ ++  LC 
Sbjct: 386 ---RRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCN 442

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
            G +D+A   +    E   +P+  +Y++LI    +  +  DA  L    +++G
Sbjct: 443 AGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 202/414 (48%), Gaps = 10/414 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L++ +     +   G +  V  +  ++ AL + N    A KF  E ++  L PN  
Sbjct: 23  KVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVV 82

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I   C      EA  ++  M      P   T+  L++ LCK+ R  EA ++L++M
Sbjct: 83  TYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEM 141

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P+I TY  L+ G C   + ++A  +   +   G +PDV TY+ ++DG CK GR 
Sbjct: 142 VYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRL 201

Query: 242 NEAMELLNEAIERG-VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            EA++L    I+ G   PN VT+N+L +G+C+ G   + + LL+ M +    PD ++Y+T
Sbjct: 202 KEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTT 261

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NG  K  ++  A  +  +M R G   D     SL+ GLC      ++ L DA  +  +
Sbjct: 262 LMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC-----RENRLSDAVHILGE 316

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +K       TY  ++    +  + +EA   +    EM   P  ++FN +I+ LC   +
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNR 374

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ-GVIP 473
             +A+ L+         P    Y  +I  L + +K  +AC +Y   L++ G +P
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLP 428



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 146/300 (48%), Gaps = 35/300 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K   LKE ID+F  + K G+   +   +N L+     + + + A+      +  G +P+ 
Sbjct: 197 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDV 256

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ ++  +C      +A  +++ M   G  P+V TFT L++ LC+  RL +A+ +L +
Sbjct: 257 VTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGE 316

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R  C P + TYN +L G C   ++EEA + ++   +    P+V ++  ++ G CKV R
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNR 374

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG-------------------------- 274
           S+EAMEL+ EA  R   P+VV + T+ +G C+E                           
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYS 434

Query: 275 ---TPMKGVGLLKLMK---KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
              T +   G+L   +   ++ C+P+  +Y+ L++   K  +   A  +  +MV+ GF V
Sbjct: 435 TLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGV 494



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 136/294 (46%), Gaps = 42/294 (14%)

Query: 216 VKNDGLKPDVYTYTAVMDGFCKV-----------------------------------GR 240
           V  +    D  TYT+++ G CKV                                    R
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA + L E   R +TPNVVT+  L +G CK G   + V LL  M+K+ C+P  ++Y++
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNS 120

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL K  +   A  + +EMV  G   D     +L+ G C KS +     +DA +VFE+
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFC-KSKKS----DDALRVFEQ 175

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH-IPRTITFNNVIQALCGEG 419
           +  +    D  TY  +I  L K  +  EA+      I+ G  +P T+T+N++I   C  G
Sbjct: 176 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 235

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           K+D+A+ LL  M E    P   +Y  L+    +L +  DA  L     ++G+ P
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 289



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 6/189 (3%)

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           ++   +C  D ++Y++L+ GL K  ++  A+    +MV  GF  D     +++  LC+++
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
                 L +A +  E+M  +    +  TY ++I  L KG + DEA + L   +    +P 
Sbjct: 61  R-----LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA-VALLSKMRKKCVPT 114

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            +T+N++I  LC   +  +A  LL  M     IP   +Y  LIT   + +KS DA  ++ 
Sbjct: 115 AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFE 174

Query: 465 AALKQGVIP 473
             + +G  P
Sbjct: 175 QLVARGFRP 183


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 206/394 (52%), Gaps = 4/394 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L +  ++ D ++  G    V+  N ++  L        A+ +F   +     P+  
Sbjct: 42  KAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDII 101

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYH-PNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           TF+I++          EA ++ + M  +    PNV T+T ++N LCK G+L  A+E+LD 
Sbjct: 102 TFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDL 161

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC PN+ TY+ L++GLC  GR ++ + +L  +   G +PDV  Y  +++G CK  R
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+EL+   I  G  P VVT+N+L   +C+     +   L+++M +R C PD I+Y+T
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE-EKDL-LEDAYQVF 358
           ++ GL +  ++  A ++ K+MV      D    ++++ GLC K W  + D  LE A ++ 
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC-KDWRVDADWKLEAACEIL 340

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           E M +     + GTY +VI  L + +K+ +AL  L   I+   +P   +F+ VI +LC  
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
             +D A  +  +M E    P+  +Y  LI  L +
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSK 434



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 210/447 (46%), Gaps = 40/447 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFF-SEASSYGLAPNS 120
           KA    + +  F ++        +  FN L+ ALV     E A + F S  +S    PN 
Sbjct: 77  KAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNV 136

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I   C       A +++D M + G  PNV T+++LV  LCK+GR  +   +L +
Sbjct: 137 VTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQE 196

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G +P++  YN LL GLC   R++EA E++  +   G  P V TY ++M+ FC+  +
Sbjct: 197 MTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQ 256

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A  L+    ERG  P+V+ +NT+  G C++        LLK M    C+PD I+YST
Sbjct: 257 VDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYST 316

Query: 301 LLNGLLK-------WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL--- 350
           +++GL K       W K+  A  I + M + G   +      ++ GLC     ++ L   
Sbjct: 317 IIDGLCKDWRVDADW-KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALL 375

Query: 351 ---------------------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                                      L+ AY++F  M+++    +P  Y  +I  L KG
Sbjct: 376 RRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKG 435

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + D+A+      +E    P   T+N+V+  LCG G+I++A+ ++  M      P   SY
Sbjct: 436 GEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASY 494

Query: 444 DMLITKLDQLEKSYDACALYGAALKQG 470
             LI  L ++    +A  L+ A   +G
Sbjct: 495 GALIRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 195/394 (49%), Gaps = 17/394 (4%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            N  L  LV   +   AV+ F E       PN +T+  +I   C      +A +++D M 
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFREERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  P V     ++  LCK+GR  +AL     +    C P+I T+N L+  L   GRVE
Sbjct: 58  DRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 208 EAYEML--MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           EA+++   M+  +  L P+V TYT V++G CK G+ + A+ELL+   E G  PNV+T++ 
Sbjct: 118 EAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV 176

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L  G CK G   KG  LL+ M +R   PD I Y+TLLNGL K  ++  A+ + + M+R G
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   NSL+   C     ++     A+++ + M+++    D   Y  VI  L +  +
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDR-----AFRLIQVMSERGCPPDVINYNTVIAGLCRDAR 291

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID------KALLLLFLMYEHAKIPS 439
            D+A   L   +    +P  IT++ +I  LC + ++D       A  +L +M +    P+
Sbjct: 292 LDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPN 351

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y ++I  L +  KS  A AL    +   V+P
Sbjct: 352 AGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 167/376 (44%), Gaps = 37/376 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA    +   +   + + G    V  +N LL  L      + A++        G  P   
Sbjct: 183 KAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVV 242

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  +C       A ++I  M + G  P+V  +  ++  LC+  RL +A  +L QM
Sbjct: 243 TYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRV------EEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
               C P++ TY+ ++ GLC   RV      E A E+L  +K  G  P+  TY  V++G 
Sbjct: 303 VAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGL 362

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           C+  +S +A+ LL   I+  V P++ +F+ +    CK         +  +M +R C P+ 
Sbjct: 363 CRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNP 422

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-------------- 341
           ++Y+ L++GL K G++  AV +F+ MV   F       NS+L GLC              
Sbjct: 423 VAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEG 481

Query: 342 ----------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                           ++       +E+AY++F+ +  K    + G Y +++  L K K+
Sbjct: 482 MIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKR 541

Query: 386 TDEALIHLHHAIEMGH 401
             +A    +  IE G+
Sbjct: 542 LSDAHGVANKLIEAGY 557



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 1/226 (0%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A +        G  PN+ T++++I   C      +A  ++  M D+   P++++F+++
Sbjct: 334 EAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMV 393

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + SLCKS  L  A ++   M    CKPN   Y  L+ GL   G V++A  +   +  +  
Sbjct: 394 IGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESF 452

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +P V TY +V+DG C VGR  EA+ ++   I +   P+  ++  L  G C+     +   
Sbjct: 453 RPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYE 512

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           L + ++ +    +   Y+ L+N L K  ++  A  +  +++  G++
Sbjct: 513 LFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 4/145 (2%)

Query: 44  DLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQE 102
           + K NP +  A   +D + K   + + + +F+ +  +     V+ +N +L  L  +   E
Sbjct: 417 ECKPNPVAYAA--LIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGRIE 473

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
            AV+           P+  ++  +IR  C  +   EA ++   +   G+   V  + +LV
Sbjct: 474 EAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCK 187
           N LCK  RL +A  V +++   G K
Sbjct: 534 NELCKKKRLSDAHGVANKLIEAGYK 558


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 206/394 (52%), Gaps = 4/394 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L +  ++ D ++  G    V+  N ++  L        A+ +F   +     P+  
Sbjct: 42  KAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDII 101

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYH-PNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           TF+I++          EA ++ + M  +    PNV T+T ++N LCK G+L  A+E+LD 
Sbjct: 102 TFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDL 161

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC PN+ TY+ L++GLC  GR ++ + +L  +   G +PDV  Y  +++G CK  R
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+EL+   I  G  P VVT+N+L   +C+     +   L+++M +R C PD I+Y+T
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE-EKDL-LEDAYQVF 358
           ++ GL +  ++  A ++ K+MV      D    ++++ GLC K W  + D  LE A ++ 
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC-KDWRVDADWKLEAACEIL 340

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           E M +     + GTY +VI  L + +K+ +AL  L   I+   +P   +F+ VI +LC  
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
             +D A  +  +M E    P+  +Y  LI  L +
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSK 434



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 210/447 (46%), Gaps = 40/447 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFF-SEASSYGLAPNS 120
           KA    + +  F ++        +  FN L+ ALV     E A + F S  +S    PN 
Sbjct: 77  KAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNV 136

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I   C       A +++D M + G  PNV T+++LV  LCK+GR  +   +L +
Sbjct: 137 VTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQE 196

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G +P++  YN LL GLC   R++EA E++  +   G  P V TY ++M+ FC+  +
Sbjct: 197 MTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQ 256

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A  L+    ERG  P+V+ +NT+  G C++        LLK M    C+PD I+YST
Sbjct: 257 VDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYST 316

Query: 301 LLNGLLK-------WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL--- 350
           +++GL K       W K+  A  I + M + G   +      ++ GLC     ++ L   
Sbjct: 317 IIDGLCKDWRVDADW-KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALL 375

Query: 351 ---------------------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                                      L+ AY++F  M+++    +P  Y  +I  L KG
Sbjct: 376 RRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKG 435

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + D+A+      +E    P   T+N+V+  LCG G+I++A+ ++  M      P   SY
Sbjct: 436 GEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASY 494

Query: 444 DMLITKLDQLEKSYDACALYGAALKQG 470
             LI  L ++    +A  L+ A   +G
Sbjct: 495 GALIRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 195/394 (49%), Gaps = 17/394 (4%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            N  L  LV   +   AV+ F E       PN +T+  +I   C      +A +++D M 
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFREERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  P V     ++  LCK+GR  +AL     +    C P+I T+N L+  L   GRVE
Sbjct: 58  DRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 208 EAYEML--MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           EA+++   M+  +  L P+V TYT V++G CK G+ + A+ELL+   E G  PNV+T++ 
Sbjct: 118 EAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV 176

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L  G CK G   KG  LL+ M +R   PD I Y+TLLNGL K  ++  A+ + + M+R G
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   NSL+   C     ++     A+++ + M+++    D   Y  VI  L +  +
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDR-----AFRLIQVMSERGCPPDVINYNTVIAGLCRDAR 291

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID------KALLLLFLMYEHAKIPS 439
            D+A   L   +    +P  IT++ +I  LC + ++D       A  +L +M +    P+
Sbjct: 292 LDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPN 351

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y ++I  L +  KS  A AL    +   V+P
Sbjct: 352 AGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 167/376 (44%), Gaps = 37/376 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA    +   +   + + G    V  +N LL  L      + A++        G  P   
Sbjct: 183 KAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVV 242

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  +C       A ++I  M + G  P+V  +  ++  LC+  RL +A  +L QM
Sbjct: 243 TYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRV------EEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
               C P++ TY+ ++ GLC   RV      E A E+L  +K  G  P+  TY  V++G 
Sbjct: 303 VAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGL 362

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           C+  +S +A+ LL   I+  V P++ +F+ +    CK         +  +M +R C P+ 
Sbjct: 363 CRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNP 422

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-------------- 341
           ++Y+ L++GL K G++  AV +F+ MV   F       NS+L GLC              
Sbjct: 423 VAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEG 481

Query: 342 ----------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                           ++       +E+AY++F+ +  K    + G Y +++  L K K+
Sbjct: 482 MIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKR 541

Query: 386 TDEALIHLHHAIEMGH 401
             +A    +  IE G+
Sbjct: 542 LSDAHGVANKLIEAGY 557



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 1/226 (0%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A +        G  PN+ T++++I   C      +A  ++  M D+   P++++F+++
Sbjct: 334 EAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMV 393

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + SLCKS  L  A ++   M    CKPN   Y  L+ GL   G V++A  +   +  +  
Sbjct: 394 IGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESF 452

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +P V TY +V+DG C VGR  EA+ ++   I +   P+  ++  L  G C+     +   
Sbjct: 453 RPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYE 512

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           L + ++ +    +   Y+ L+N L K  ++  A  +  +++  G++
Sbjct: 513 LFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 4/145 (2%)

Query: 44  DLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQE 102
           + K NP +  A   +D + K   + + + +F+ +  +     V+ +N +L  L  +   E
Sbjct: 417 ECKPNPVAYAA--LIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVGRIE 473

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
            AV+           P+  ++  +IR  C  +   EA ++   +   G+   V  + +LV
Sbjct: 474 EAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCK 187
           N LCK  RL +A  V +++   G K
Sbjct: 534 NELCKKKRLSDAHGVANKLIEAGYK 558


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 214/398 (53%), Gaps = 12/398 (3%)

Query: 80  GTNWSVSDF---NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
            TN   +DF     L+  L  +   E A+ F  +  S G  P+ +T++ +I   C +N  
Sbjct: 3   ATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRL 62

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            EARK ++ M +    PNV T+T+L++ LCK GR+ EA+ +L +M R  C P   TYN L
Sbjct: 63  HEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSL 121

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           + GLC   R  EAY++L  +   G  PD++TYT ++ GFCK  +S++A+ +  + + RG 
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
            P+VVT++ L +G CKEG   + + L  +++K  +C+P+ ++Y++L++G  + GK+  A+
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
           ++ + M   G   D     +L+ G C  +      L+DAY +  +MT+K    D  T+  
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLAR-----LDDAYDLLNQMTRKGLTPDVVTFTS 296

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           ++  L +  +  +A+  L         P   T+N ++   C   ++++A    F++ E  
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA--RKFMLEEMD 354

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             P+  S++++I  L ++ +S +A  L   A ++   P
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNP 392



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 217/413 (52%), Gaps = 18/413 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +   ++K     +V+ +N L+  L        A     E    G  P+ +
Sbjct: 93  KGGRVDEAVALLSKMRKKCVPTAVT-YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIF 151

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C      +A +V + +   G+ P+V T++ L++ LCK GRLKEA+++  +M
Sbjct: 152 TYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 211

Query: 182 GRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            + G C PN  TYN L+ G C +G+++EA  +L  +   G  PDV TYT +M+GFCK+ R
Sbjct: 212 IKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLAR 271

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++A +LLN+   +G+TP+VVTF +L +G C+E      V +L  M++++C P   +Y+T
Sbjct: 272 LDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNT 331

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLEDAYQVF 358
           +L+G  +  ++  A     E +     V     N ++RGLC   +S E  +L+E+A    
Sbjct: 332 ILDGYCRANQLEEARKFMLEEMDCPPNVVS--FNIMIRGLCKVNRSSEAMELVEEA---- 385

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL-IHLHHAIEMGHIPRTITFNNVIQALCG 417
               ++    D   Y  VI  L + KK DEA  ++     E G +P +IT++ +I  LC 
Sbjct: 386 ---RRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCN 442

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
            G +D+A   +    E   +P+  +Y++LI    +  +  DA  L    +++G
Sbjct: 443 AGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 202/414 (48%), Gaps = 10/414 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L++ +     +   G +  V  +  ++ AL + N    A KF  E ++  L PN  
Sbjct: 23  KVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVV 82

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I   C      EA  ++  M      P   T+  L++ LCK+ R  EA ++L++M
Sbjct: 83  TYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEM 141

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P+I TY  L+ G C   + ++A  +   +   G +PDV TY+ ++DG CK GR 
Sbjct: 142 VYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRL 201

Query: 242 NEAMELLNEAIERG-VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            EA++L    I+ G   PN VT+N+L +G+C+ G   + + LL+ M +    PD ++Y+T
Sbjct: 202 KEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTT 261

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NG  K  ++  A  +  +M R G   D     SL+ GLC      ++ L DA  +  +
Sbjct: 262 LMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC-----RENRLSDAVHILGE 316

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +K       TY  ++    +  + +EA   +    EM   P  ++FN +I+ LC   +
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNR 374

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ-GVIP 473
             +A+ L+         P    Y  +I  L + +K  +AC +Y   L++ G +P
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLP 428



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 145/298 (48%), Gaps = 35/298 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K   LKE ID+F  + K G+   +   +N L+     + + + A+      +  G +P+ 
Sbjct: 197 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDV 256

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ ++  +C      +A  +++ M   G  P+V TFT L++ LC+  RL +A+ +L +
Sbjct: 257 VTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGE 316

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R  C P + TYN +L G C   ++EEA + ++   +    P+V ++  ++ G CKV R
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNR 374

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG-------------------------- 274
           S+EAMEL+ EA  R   P+VV + T+ +G C+E                           
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYS 434

Query: 275 ---TPMKGVGLLKLMK---KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
              T +   G+L   +   ++ C+P+  +Y+ L++   K  +   A  +  +MV+ GF
Sbjct: 435 TLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 136/294 (46%), Gaps = 42/294 (14%)

Query: 216 VKNDGLKPDVYTYTAVMDGFCKV-----------------------------------GR 240
           V  +    D  TYT+++ G CKV                                    R
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA + L E   R +TPNVVT+  L +G CK G   + V LL  M+K+ C+P  ++Y++
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNS 120

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL K  +   A  + +EMV  G   D     +L+ G C KS +     +DA +VFE+
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFC-KSKKS----DDALRVFEQ 175

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH-IPRTITFNNVIQALCGEG 419
           +  +    D  TY  +I  L K  +  EA+      I+ G  +P T+T+N++I   C  G
Sbjct: 176 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 235

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           K+D+A+ LL  M E    P   +Y  L+    +L +  DA  L     ++G+ P
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 289



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 6/189 (3%)

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           ++   +C  D ++Y++L+ GL K  ++  A+    +MV  GF  D     +++  LC+++
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
                 L +A +  E+M  +    +  TY ++I  L KG + DEA + L   +    +P 
Sbjct: 61  R-----LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA-VALLSKMRKKCVPT 114

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            +T+N++I  LC   +  +A  LL  M     IP   +Y  LIT   + +KS DA  ++ 
Sbjct: 115 AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFE 174

Query: 465 AALKQGVIP 473
             + +G  P
Sbjct: 175 QLVARGFRP 183


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 220/414 (53%), Gaps = 7/414 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG-LAPNS 120
           +   L   +++   + + G   +   +N+++  L    + ++A++ F E    G   P+ 
Sbjct: 161 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDV 220

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T+S ++          +A ++++ M   G  PNV T++ L++ LCK+G+L EA  +L +
Sbjct: 221 FTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR 280

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R GC PNI TYN ++ G C +GR++EAY +L  + + G +P+V TYT ++D FCK G+
Sbjct: 281 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 340

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           + +A+ L+   +E+G  PN+ T+N+L + +CK+    +   LL  M ++ C+P+ +SY+T
Sbjct: 341 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 400

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++ GL K  K+   V + ++M+      D    N+++  +C K++     ++ AY++F  
Sbjct: 401 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC-KTYR----VDIAYELFNL 455

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI-EMGHIPRTITFNNVIQALCGEG 419
           + +     +  TY  ++  L K ++ D+A   L     + G  P  IT+N VI  LC   
Sbjct: 456 IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 515

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++D+A  L   M      P   +Y ++I+ L +     +A  +    LK G  P
Sbjct: 516 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDP 569



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 211/387 (54%), Gaps = 13/387 (3%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           +L  L    +   AV  F E S     P+S T++ MI      +   +A ++++ M DNG
Sbjct: 16  ILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + PNV ++  +++  CK+ R++ AL +L+QM   GC P++ +Y  ++ GLC + +V+EA 
Sbjct: 75  FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            ++  +   G +P+V TY  ++DGFC+VG  + A+EL+ +  ERG  PN +T+N + +G 
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194

Query: 271 CKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           C        + L K M++  +C PD  +YST+++ L+K GK+  A  + + MV  G   +
Sbjct: 195 CSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPN 254

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               +SLL GLC     +   L++A  + ++MT+     +  TY  +I    K  + DEA
Sbjct: 255 VVTYSSLLHGLC-----KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI-- 447
              L   ++ G  P  +T+  ++ A C  GK + A+ L+ +M E   +P+  +Y+ L+  
Sbjct: 310 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 369

Query: 448 -TKLDQLEKSYDACALYGAALKQGVIP 473
             K D++E+   AC L  + +++G +P
Sbjct: 370 FCKKDEVER---ACQLLSSMIQKGCVP 393



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 202/387 (52%), Gaps = 6/387 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++  L   +  + A++   E    G APN ++++ ++  +C  N    A  +++ M 
Sbjct: 47  YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 106

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V ++T ++N LCK  ++ EA  V+D+M + GC+PN+ TY  L+ G C VG ++
Sbjct: 107 MRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 166

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG-VTPNVVTFNTL 266
            A E++  +   G +P+  TY  +M G C   + + A++L  E  E G   P+V T++T+
Sbjct: 167 GAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTI 226

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +   K G       L++ M  + C P+ ++YS+LL+GL K GK+  A ++ + M R G 
Sbjct: 227 VDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 286

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             +    N+++ G C     +   +++AY + E+M       +  TY +++    K  K 
Sbjct: 287 SPNIVTYNTIIDGHC-----KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           ++A+  +   +E G++P   T+N+++   C + ++++A  LL  M +   +P+  SY+ +
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 401

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I  L +  K ++   L    L    +P
Sbjct: 402 IAGLCKATKVHEGVLLLEQMLSNNCVP 428



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 207/414 (50%), Gaps = 6/414 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K+  + +   + +++   G + +V  ++ LL  L    + + A       +  G +PN 
Sbjct: 231 VKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNI 290

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I  +C      EA  +++ M D G  PNV T+T+L+++ CK G+ ++A+ +++ 
Sbjct: 291 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 350

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  PN+ TYN LL   C    VE A ++L ++   G  P+V +Y  V+ G CK  +
Sbjct: 351 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 410

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +E + LL + +     P++VTFNT+ +  CK         L  L+++  C P+ ++Y++
Sbjct: 411 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 470

Query: 301 LLNGLLKWGKIRPAVSIFKEMVR-FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           L++GL K  +   A  + +EM R  G   D    N+++ GLC     ++     AY++F 
Sbjct: 471 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDR-----AYKLFL 525

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M       D  TY IVI +L K +  DEA   L   ++ G  P  IT+  +I   C  G
Sbjct: 526 QMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTG 585

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +DKAL +L L+      P   ++ + I  L +  +   A  L    L+ G++P
Sbjct: 586 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 639



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 203/420 (48%), Gaps = 31/420 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  L + I + + +  +G   +V  +N +L      N  E A+    +    G  P+  
Sbjct: 56  KSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVV 115

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +I   C  +   EA +V+D M   G  PNV T+  LV+  C+ G L  A+E++ +M
Sbjct: 116 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 175

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKVGR 240
              G +PN  TYN ++ GLC   +++ A ++   ++  G   PDV+TY+ ++D   K G+
Sbjct: 176 TERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGK 235

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++A  L+   + +G +PNVVT+++L +G CK G   +   LL+ M +  C P+ ++Y+T
Sbjct: 236 VDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 295

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC------------------- 341
           +++G  K G+I  A  + +EMV  G + +      LL   C                   
Sbjct: 296 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 355

Query: 342 -----------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                      +  + +KD +E A Q+   M +K  V +  +Y  VI  L K  K  E +
Sbjct: 356 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 415

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           + L   +    +P  +TFN +I A+C   ++D A  L  L+ E    P+  +Y+ L+  L
Sbjct: 416 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGL 475



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 205/415 (49%), Gaps = 10/415 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E   +   + + G + ++  +N ++     L   + A     E    G  PN  
Sbjct: 267 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 326

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+++++  +C      +A  +++ M + GY PN+ T+  L++  CK   ++ A ++L  M
Sbjct: 327 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 386

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC PN+ +YN ++ GLC   +V E   +L  + ++   PD+ T+  ++D  CK  R 
Sbjct: 387 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 446

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM-KKRNCLPDKISYST 300
           + A EL N   E G TPN+VT+N+L +G CK     +   LL+ M +K+ C PD I+Y+T
Sbjct: 447 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 506

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++GL K  ++  A  +F +M+  G   D+   + ++  LC   W     +++A  V E 
Sbjct: 507 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC--KWR---FMDEANNVLEL 561

Query: 361 MTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           M K  +  DPG  TYG +I    K    D+AL  L   +  G  P  +TF+  I  L   
Sbjct: 562 MLK--NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR 619

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G++ +A  LL  M     +P   +Y+ L+       ++ DA  L+    + G  P
Sbjct: 620 GRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEP 674



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 168/337 (49%), Gaps = 6/337 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++    +  S+ + G   +V  +N ++  L    +    V    +  S    P+  
Sbjct: 372 KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIV 431

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C       A ++ + + ++G  PN+ T+  LV+ LCKS R  +A  +L +M
Sbjct: 432 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 491

Query: 182 GR-IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            R  GC P+I TYN ++ GLC   RV+ AY++ + + +DGL PD  TY+ V+   CK   
Sbjct: 492 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 551

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA  +L   ++ G  P  +T+ TL +G+CK G   K + +L+L+  +   PD +++S 
Sbjct: 552 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 611

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
            ++ L K G++R A  + + M+R G   D    N+LL+G C  S       EDA  +FE 
Sbjct: 612 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRT-----EDAVDLFEV 666

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
           M +     D  TY  ++  L   K   + L  +  ++
Sbjct: 667 MRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSM 703



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 140/274 (51%), Gaps = 6/274 (2%)

Query: 69  RIDI----FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS-SYGLAPNSWTF 123
           R+DI    F+ I++ G   ++  +N L+  L      + A     E +   G +P+  T+
Sbjct: 445 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 504

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +I   C       A K+   M  +G  P+  T++I+++SLCK   + EA  VL+ M +
Sbjct: 505 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 564

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            G  P   TY  L+ G C  G +++A E+L  + + G  PDV T++  +D   K GR  +
Sbjct: 565 NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQ 624

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A ELL   +  G+ P+ VT+NTL  G+C        V L ++M++  C PD  +Y+TL+ 
Sbjct: 625 AGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVG 684

Query: 304 GLLKWGKIRPAVS-IFKEMVRFGFEVDERMMNSL 336
            L+     +  ++ + K MV  GF+++  + + L
Sbjct: 685 HLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKL 718



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 124/255 (48%), Gaps = 7/255 (2%)

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           GLK     + +++ G C  G+ ++A+    E + +   P+ VT+NT+ NG  K       
Sbjct: 5   GLKAHAGVHKSILRGLCDAGQCSDAVLHFRE-MSKTCPPDSVTYNTMINGLSKSDRLDDA 63

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + LL+ M      P+  SY+T+L+G  K  ++  A+ + ++MV  G   D     +++ G
Sbjct: 64  IRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVING 123

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC     + D +++A +V +KM ++    +  TYG ++    +    D A+  +    E 
Sbjct: 124 LC-----KLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT-SYDMLITKLDQLEKSYD 458
           G+ P  IT+NN++  LC   K+D AL L   M E    P    +Y  ++  L +  K  D
Sbjct: 179 GYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 238

Query: 459 ACALYGAALKQGVIP 473
           AC L  A + +G  P
Sbjct: 239 ACRLVEAMVSKGCSP 253


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 217/427 (50%), Gaps = 6/427 (1%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           +P S      +D + KA  L +  D+F  +   G   S   +  L+  L M N  + A +
Sbjct: 7   SPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F++ +  G  P+  T++++I   C +    EA  +I  M ++G+ P+V T+  +++ LC
Sbjct: 67  LFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSGR++EAL + ++M R+GC PN +++N ++ GLC   ++++A ++   ++   + PD +
Sbjct: 127 KSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSW 186

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           +Y  ++DG  K G+ NEA +L    ++ G+TP+ VT+N + +G C   T  + + L K M
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           + + C P + +++ L++   K GK+  A  + K M   G   D    ++L+ GLC  +  
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR- 305

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
               ++DA  + E M K+       T   +I  L K  +  EA   L   +  G  P  +
Sbjct: 306 ----VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           T+N ++   C  G+ ++A  LL  M      P+  +Y  L++ L +  +  +AC ++   
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421

Query: 467 LKQGVIP 473
              G  P
Sbjct: 422 KSSGCAP 428



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 204/418 (48%), Gaps = 11/418 (2%)

Query: 16  NRRNHNKI----PQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERI 70
           NRR+HN I     Q +K +  A       E+ D+   P S      +D + KA  L E  
Sbjct: 149 NRRSHNTIILGLCQQSK-IDQACQVFHEMEARDIP--PDSWSYGILIDGLAKAGKLNEAY 205

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
            +F  +   G   S   +N ++  + +    + A++ F    S G  P+ +TF+I+I  +
Sbjct: 206 KLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH 265

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +    EA +++  M D+G+ P+V T++ L++ LC   R+ +A  +L+ M +  CKP +
Sbjct: 266 CKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 325

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            T N L+ GLC  GR++EA E+L  + + G  PDV TY  ++ G C+ G++  A ELL++
Sbjct: 326 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 385

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + RG+ PNVVT+  L +G CK     +  G+   MK   C P+  +Y+ L+ G    G+
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +   + +F EMV  G   D  +  +L   LC KS      LE   +  E +  +    + 
Sbjct: 446 VDGGLKLFGEMVCAGISPDHVVYGTLAAELC-KSGRSARALEILREGRESLRSEAWGDE- 503

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             Y   +  L    K + AL  +   +  G +P      +++  LC  G+  +A  +L
Sbjct: 504 -VYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 560



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 177/358 (49%), Gaps = 5/358 (1%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           ++P+SW++ I+I          +AR +   +  +G  P+   +T L++ LC +    +A 
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           E+   M R GC P+  TYN ++   C  G +EEA +++  +  DG  PDV TY  VMDG 
Sbjct: 66  ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK GR  EA+ L NE    G TPN  + NT+  G C++    +   +   M+ R+  PD 
Sbjct: 126 CKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDS 185

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
            SY  L++GL K GK+  A  +F+ M+  G        N ++ G+C+        L++A 
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAY-----TLDEAL 240

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++F+ M  K       T+ I+I    K  K DEA   L    + GH+P  +T++ +I  L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           C   ++D A  LL  M +    P+  + + LI  L +  +  +A  +  A +  G  P
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP 358



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 155/314 (49%), Gaps = 5/314 (1%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M +    P+  ++ IL++ L K+G+L +A ++  ++   G  P+   Y  L+ GLC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            ++A E+  ++   G  P   TY  ++D  CK G   EA +L+ + IE G  P+VVT+NT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + +G CK G   + + L   M++  C P++ S++T++ GL +  KI  A  +F EM    
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM---- 176

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            E  +   +S   G+ +    +   L +AY++F +M          TY +VI  +     
Sbjct: 177 -EARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYT 235

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            DEAL         G  P   TFN +I A C  GK+D+A  LL  M +   +P   +Y  
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST 295

Query: 446 LITKLDQLEKSYDA 459
           LI+ L  + +  DA
Sbjct: 296 LISGLCSIARVDDA 309



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 154/365 (42%), Gaps = 65/365 (17%)

Query: 41  ESLDLKENPRS--LQAQRFVDRI------KASPLKERIDIFDSIKKDGTNWSVSDFNDLL 92
           E+L+L ++ RS   +  RF   I      K   + E   +   +  DG    V  ++ L+
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 93  MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
             L  +   + A     +       P   T + +I   C      EAR+V+D M  +G  
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P+V T+  LV+  C++G+ + A E+L  M   G  PN+ TY  L+ GLC   R+ EA  +
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGV 417

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +K+ G  P+++TYTA++ GFC  G+ +  ++L  E +  G++P+ V + TL    CK
Sbjct: 418 FAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCK 477

Query: 273 EGTPMKGV-------------------------------------GLLKLMKKRNCLPDK 295
            G   + +                                     G ++ M +   LP  
Sbjct: 478 SGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAP 537

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKE--------------------MVRFGFEVDERMMNS 335
              ++L+ GL K G+   A ++ +E                    MV  G+E+++ ++  
Sbjct: 538 ERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAAKFVEEMVGKGYEIEDGVLKP 597

Query: 336 LLRGL 340
           LL  L
Sbjct: 598 LLSTL 602



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 40/194 (20%)

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M +RN  PD  SY  L++GL K GK+  A  +F++++  G         SL+ GLCM + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                 +DA ++F  M ++                                   G  P  
Sbjct: 61  -----FDDARELFADMNRR-----------------------------------GCPPSP 80

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           +T+N +I A C  G +++A  L+  M E   +P   +Y+ ++  L +  +  +A  L+  
Sbjct: 81  VTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNE 140

Query: 466 ALKQGVIPQRKPQD 479
             + G  P R+  +
Sbjct: 141 MERLGCTPNRRSHN 154


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 212/412 (51%), Gaps = 8/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KAS   +  ++   +   G       FN ++  L    + E A    +  +     P+  
Sbjct: 273 KASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCC 332

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C + +   A+ ++D    +G+ P+V T++IL + LCK GR+ EA E++ +M
Sbjct: 333 TYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM 392

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PN+ TYN L+ GLC   + E+AYE+L ++ + G  PDV TYT ++DG CK GR 
Sbjct: 393 SGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRL 452

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A++++   ++RG TP+V+T+  L  G C+ G   +   + K M  ++C  D ++Y +L
Sbjct: 453 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 512

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG  K  + + A  +  + +R    +D  + N+L+ G C     ++  L++   VFE M
Sbjct: 513 VNGYCKSSRTKEAQKVV-DGIRGTPYID--VYNALMDGYC-----KEGRLDEIPNVFEDM 564

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +  V +  TY IV+  L K  K DEA   L      G +P  +++N +I  L    K 
Sbjct: 565 ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKP 624

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +A  +L  M +    P   +Y+ L+ +  + E+  DA  +    +K GV P
Sbjct: 625 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP 676



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 193/362 (53%), Gaps = 9/362 (2%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N  L  L+     +     F      G AP+S+T+ ++I+  C  N   +A  ++D    
Sbjct: 129 NCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKV 188

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G+ P V+ +TIL  + CK+GRLK+ALE+   +      P+   YN ++ G C     + 
Sbjct: 189 RGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDG 244

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A E L  +    + PDV+TY  ++DG CK  ++++A E+L+E ++RGVTP+ VTFN++ +
Sbjct: 245 ALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMD 304

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G CK G   +   LL +M +RNC P   +Y+TL++GL K   +  A  +  E V  GF  
Sbjct: 305 GLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVP 364

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D    + L  GLC     ++  +++A+++ ++M+ K    +  TY  +I  L K  KT++
Sbjct: 365 DVVTYSILADGLC-----KRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEK 419

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   L   +  G +P  +T+  ++  LC EG++DKAL ++  M +    PS  +Y  L+ 
Sbjct: 420 AYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALME 479

Query: 449 KL 450
            L
Sbjct: 480 GL 481



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 219/444 (49%), Gaps = 41/444 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   LK+ ++IF +I     +     +N ++      N+ + A++F  E +   +AP+ +
Sbjct: 207 KTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVF 262

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I   C  +   +A +++  M D G  P+  TF  +++ LCK+G+ + A  +L  M
Sbjct: 263 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 322

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C+P+  TYN L+ GLC    V+ A +++    + G  PDV TY+ + DG CK GR 
Sbjct: 323 AERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRI 382

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA EL+ E   +G TPN+VT+NTL +G CK     K   LL+ +     +PD ++Y+ +
Sbjct: 383 DEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTII 442

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K G++  A+ + + M++ G         +L+ GLC         +++A+ +F++M
Sbjct: 443 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGR-----VDEAHHIFKEM 497

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEA-----------LIHLHHAIEMGH--------- 401
             K    D   Y  ++    K  +T EA            I +++A+  G+         
Sbjct: 498 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEI 557

Query: 402 ------------IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
                       +P   T+N V+  LC  GK+D+A   L  M+    +P   SY+++I  
Sbjct: 558 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 617

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
           L +  K  +A  +    ++ G+ P
Sbjct: 618 LFKASKPKEARQVLDQMIQAGIPP 641



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 213/445 (47%), Gaps = 42/445 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L + + + + + K G   SV  +  L+  L      + A   F E  S     ++ 
Sbjct: 448 KEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADAL 507

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  ++  YC  +   EA+KV+D +      P +  +  L++  CK GRL E   V + M
Sbjct: 508 AYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDM 564

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PNI+TYN ++ GLC  G+V+EA+  L ++ + G  PDV +Y  ++DG  K  + 
Sbjct: 565 ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKP 624

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA ++L++ I+ G+ P+ VT+NTL   +CKE      VG+LK M K    PD ++Y+TL
Sbjct: 625 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL 684

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDE-RMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++GL +  ++  A  +  EM+R G  V      N+++  LC     ++  L+ A  + + 
Sbjct: 685 ISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLC-----KEGCLKQALLLMDH 739

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEA-------------------LIHLHHAIEMGH 401
           MT      +  TY I I  L K  + DEA                   +I L  A ++  
Sbjct: 740 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDR 799

Query: 402 IPR--------------TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             +              + TFN +I A     ++D+AL LL LM +    PS  +Y+M+I
Sbjct: 800 ASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVI 859

Query: 448 TKLDQLEKSYDACALYGAALKQGVI 472
           T L +L+K   A  L+     +G++
Sbjct: 860 TCLCKLDKVDKAWELFDEMAVRGIV 884



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 189/401 (47%), Gaps = 27/401 (6%)

Query: 47  ENPRSLQAQRFVDRIKASP-----------------LKERIDIFDSIKKDGTNWSVSDFN 89
           ++ R+ +AQ+ VD I+ +P                 L E  ++F+ +   G   ++  +N
Sbjct: 518 KSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYN 577

Query: 90  DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
            ++  L    + + A  F     S G  P+  +++I+I      +   EAR+V+D M   
Sbjct: 578 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA 637

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G  P+  T+  L+   CK  R  +A+ +L  M + G  P+  TYN L+ GL    R+ +A
Sbjct: 638 GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDA 697

Query: 210 YEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           YE++   ++N  +     TY  ++D  CK G   +A+ L++     GV  N VT+N   +
Sbjct: 698 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFID 757

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-GFE 327
             CKEG   +   LL  M   + L D++SY+T++ GL K  ++  A  + +EMV   G  
Sbjct: 758 RLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLC 814

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           +     N L+      ++ +   L++A  +   M ++       TY +VI  L K  K D
Sbjct: 815 ITSHTFNLLI-----DAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVD 869

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +A          G +  ++++  +I  LCG+G+  +AL +L
Sbjct: 870 KAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVL 910



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 10/302 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KAS  KE   + D + + G       +N L+         + AV         G+ P++ 
Sbjct: 620 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 679

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV-TTFTILVNSLCKSGRLKEALEVLDQ 180
           T++ +I      N   +A +++  M  NG   +  TT+  +++ LCK G LK+AL ++D 
Sbjct: 680 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH 739

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G + N  TYN  +  LC  GR++EA  +L  +  D L+ +V +YT V+ G CK  +
Sbjct: 740 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM--DTLRDEV-SYTTVIIGLCKAEQ 796

Query: 241 SNEAMELLNEAIE-RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
            + A +L  E +  +G+     TFN L + + K     + + LL LM +R C P  I+Y+
Sbjct: 797 LDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYN 856

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            ++  L K  K+  A  +F EM   G          L+ GLC +        ++A QV E
Sbjct: 857 MVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRG-----KEALQVLE 911

Query: 360 KM 361
           +M
Sbjct: 912 EM 913



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 116/285 (40%), Gaps = 48/285 (16%)

Query: 67  KERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           +ER D    I  ++ K G +     +N L+  L   N    A +   E    G   ++ T
Sbjct: 656 EERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACT 715

Query: 123 -FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C +    +A  ++D M  +G   N  T+ I ++ LCK GRL EA  +L +M
Sbjct: 716 TYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 775

Query: 182 GR-----------IG-CKP---------------------NIQTYNCLLKGLCYVGRVEE 208
                        IG CK                         T+N L+       R++E
Sbjct: 776 DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 835

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +L  +   G  P V TY  V+   CK+ + ++A EL +E   RG+  + V++  L  
Sbjct: 836 ALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIY 895

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           G C +G   + + +L+ M   +C  D           LKW  + P
Sbjct: 896 GLCGQGRGKEALQVLEEMASSDCEIDD----------LKWEDVAP 930



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 5/196 (2%)

Query: 57  FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
            +DR+ K   LK+ + + D +   G   +   +N  +  L      + A    SE  +  
Sbjct: 720 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL- 778

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD-NGYHPNVTTFTILVNSLCKSGRLKEA 174
              +  +++ +I   C       A K+   M    G      TF +L+++  K+ RL EA
Sbjct: 779 --RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEA 836

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L +L  M + GC P++ TYN ++  LC + +V++A+E+   +   G+     +YT ++ G
Sbjct: 837 LTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYG 896

Query: 235 FCKVGRSNEAMELLNE 250
            C  GR  EA+++L E
Sbjct: 897 LCGQGRGKEALQVLEE 912


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 213/430 (49%), Gaps = 8/430 (1%)

Query: 24  PQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIK-ASPLKERIDIFDSIKKDGTN 82
           P+F   + F     +T+ +     +P S+    F         + + +  F+ +      
Sbjct: 7   PKFRSFLFFIHQHFTTSTASTTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPL 66

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC--NKNDFFEAR 140
             V  FN LL +LV      T +    +     + PN +T +I+I C C  N++    A 
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
             +  MF  G  P   TF  L+N LC   ++ +A+++ D++G++G  P++ TY  ++KGL
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C +G    A ++L  ++  G KPDV  Y  V+D  CK  R+NEAM   +E +++G+ PNV
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           VT++++ +G+C  G   +   L K M  RN +P+ ++++ L++GL K G I  A  +F+ 
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEM 306

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M   G E D    ++L+ G C++S      +++A ++F+ M  K        Y I+I   
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQ-----MDEAQKLFDIMVGKGFAPSVRVYNILINGH 361

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K ++ +EA   L    +    P T+T++ ++Q  C  G+   A  L   M  +  +P  
Sbjct: 362 CKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDS 421

Query: 441 TSYDMLITKL 450
            +Y +L+  L
Sbjct: 422 ITYSILLDGL 431



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 181/378 (47%), Gaps = 5/378 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +   +++ G    V  +N ++ +L        A+ FFSE    G+ PN  T+S ++  
Sbjct: 196 LQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHG 255

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +CN     EA  +   M      PN  TFTILV+ LCK G + EA  V + M   G +P+
Sbjct: 256 FCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPD 315

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TY+ L+ G C   +++EA ++   +   G  P V  Y  +++G CK  R NEA  LL+
Sbjct: 316 AYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLS 375

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E  +R +TP+ VT++TL  G+C+ G P     L K M     LPD I+YS LL+GL K G
Sbjct: 376 EMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHG 435

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +  A  + K M     E    + N L++G+C         LE A ++F  +  K     
Sbjct: 436 HLDEAFRLLKAMQESKIEPHICIYNILIQGMC-----NFGKLEAARELFSNLFVKGIQPS 490

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY ++I  L K   ++EA       +  G +P + T+N  IQ     G    A+ L+ 
Sbjct: 491 VVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIE 550

Query: 430 LMYEHAKIPSRTSYDMLI 447
            M         +++ ML+
Sbjct: 551 EMVGRGFSADSSTFQMLL 568



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 186/406 (45%), Gaps = 40/406 (9%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +FD I K G   S+  +  ++  L  +     A++   +    G  P+   ++ +I
Sbjct: 159 DAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVI 218

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C      EA      M D G  PNV T++ +++  C  G+L EA  +  QM      
Sbjct: 219 DSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  T+  L+ GLC  G + EA  +   +  +G++PD YTY+A+MDG+C   + +EA +L
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +  + +G  P+V  +N L NG+CK     +   LL  M  R+  PD ++YSTL+ G  +
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQ 398

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G+ + A  +FKEM  +G   D    + LL GLC         L++A+++ + M +    
Sbjct: 399 AGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGH-----LDEAFRLLKAMQES--- 450

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
                                        IE    P    +N +IQ +C  GK++ A  L
Sbjct: 451 ----------------------------KIE----PHICIYNILIQGMCNFGKLEAAREL 478

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              ++     PS  +Y ++I+ L +   S +AC ++   +  G +P
Sbjct: 479 FSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLP 524



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 143/290 (49%), Gaps = 1/290 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     VD + K   + E   +F+ + ++G       ++ L+    + ++ + A K 
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F      G AP+   ++I+I  +C      EA+ ++  M+D    P+  T++ L+   C+
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQ 398

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +GR + A ++  +M   G  P+  TY+ LL GLC  G ++EA+ +L  ++   ++P +  
Sbjct: 399 AGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICI 458

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++ G C  G+   A EL +    +G+ P+VVT+  + +G  KEG   +   + + M 
Sbjct: 459 YNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMV 518

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
              CLP+  +Y+  + G L+ G    AV + +EMV  GF  D      LL
Sbjct: 519 VNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 119/240 (49%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E   +FD +   G   SV  +N L+           A    SE     L P++ T+
Sbjct: 330 SQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTY 389

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           S +++ +C       A+K+   M   G  P+  T++IL++ LCK G L EA  +L  M  
Sbjct: 390 STLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQE 449

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
              +P+I  YN L++G+C  G++E A E+  N+   G++P V TYT ++ G  K G SNE
Sbjct: 450 SKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNE 509

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A E+  + +  G  PN  T+N    G+ + G P   V L++ M  R    D  ++  LL+
Sbjct: 510 ACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 7/253 (2%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P V  +  ++    K    +  + L  +     + PNV T   L N  C           
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126

Query: 283 LKL--MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
             L  M K    P  +++ TLLNGL    KI  AV +F E+ + GF        ++++GL
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C           +A Q+ +KM +K    D   Y  VI +L K ++ +EA+      ++ G
Sbjct: 187 CKIGHTT-----NALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQG 241

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
             P  +T+++++   C  G++++A  L   M     +P+  ++ +L+  L +     +A 
Sbjct: 242 IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEAR 301

Query: 461 ALYGAALKQGVIP 473
            ++    + GV P
Sbjct: 302 RVFEMMTENGVEP 314


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 219/414 (52%), Gaps = 7/414 (1%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG-LAPNS 120
            +A  +    ++   + + G   +V   N ++  L    + ++A++ F E    G   P+ 
Sbjct: 889  RAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDV 948

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +T+S ++          +A ++++ M   G  PNV T++ L++ LCK+G+L EA  +L +
Sbjct: 949  FTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR 1008

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            M R GC PNI TYN ++ G C +GR++EAY +L  + + G +P+V TYT ++D FCK G+
Sbjct: 1009 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 1068

Query: 241  SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + +A+ L+   +E+G  PN+ T+N+L + +CK+    +   LL  M ++ C+P+ +SY+T
Sbjct: 1069 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 1128

Query: 301  LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
            ++ GL K  K+   V + ++M+      D    N+++  +C K++     ++ AY++F  
Sbjct: 1129 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC-KTYR----VDIAYELFNL 1183

Query: 361  MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI-EMGHIPRTITFNNVIQALCGEG 419
            + +     +  TY  ++  L K ++ D+A   L     + G  P  IT+N VI  LC   
Sbjct: 1184 IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 1243

Query: 420  KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++D+A  L   M      P   +Y ++I+ L +     +A  +    LK G  P
Sbjct: 1244 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDP 1297



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 205/388 (52%), Gaps = 8/388 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+A  +    ++FD + + G          +L  L    +   AV  F E S     P+S
Sbjct: 172 IRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDS 230

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ MI      +   +A ++++ M DNG+ PNV ++  +++  CK+ R++ AL +L+Q
Sbjct: 231 VTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQ 290

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC P++ +Y  ++ GLC + +V+EA  ++  +   G +P+V TY  ++DGFC+VG 
Sbjct: 291 MVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 350

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A+EL+ +  ERG  PN +T+N + + +C+     +   +L++M +  C PD I+YST
Sbjct: 351 LDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++G  K GK+R A  + ++M+R G   D   +++L+  LC      K    D+ Q   +
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALC------KAAAIDSAQELLR 464

Query: 361 MTKKVSVT-DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           M+  +    D   Y I+I  L K K+  EA   L   ++    P  +T+N+V+  LC   
Sbjct: 465 MSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSR 524

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +I+ A LL   M     +P   +Y ++I
Sbjct: 525 RINDAFLLFDRMRAAGVMPDVVTYSIVI 552



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 199/383 (51%), Gaps = 9/383 (2%)

Query: 70   IDIFD-SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
            +  FD +  ++G N      N LL AL+ L   + A++ +   +    +PN +TF+I+I 
Sbjct: 828  LGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYR--NKLCCSPNMFTFTILIH 885

Query: 129  CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG-CK 187
              C   D   A +++  M  +G   NV    +++  LC + +L  ALE+  +M   G C 
Sbjct: 886  GLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCP 945

Query: 188  PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            P++ TY+ ++  L   G+V++A  ++ ++ + G  P+V TY++++ G CK G+ +EA  L
Sbjct: 946  PDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 1005

Query: 248  LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            L      G +PN+VT+NT+ +G+CK G   +   LL+ M    C P+ ++Y+ LL+   K
Sbjct: 1006 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK 1065

Query: 308  WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
             GK   A+ + + MV  G+  +    NSLL   C     +KD +E A Q+   M +K  V
Sbjct: 1066 CGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFC-----KKDEVERACQLLSSMIQKGCV 1120

Query: 368  TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
             +  +Y  VI  L K  K  E ++ L   +    +P  +TFN +I A+C   ++D A  L
Sbjct: 1121 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 1180

Query: 428  LFLMYEHAKIPSRTSYDMLITKL 450
              L+ E    P+  +Y+ L+  L
Sbjct: 1181 FNLIQESGCTPNLVTYNSLVHGL 1203



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 207/414 (50%), Gaps = 6/414 (1%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            +K+  + +   + + +   G + +V  ++ LL  L    + + A       +  G +PN 
Sbjct: 959  VKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNI 1018

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             T++ +I  +C      EA  +++ M D G  PNV T+T+L+++ CK G+ ++A+ +++ 
Sbjct: 1019 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 1078

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            M   G  PN+ TYN LL   C    VE A ++L ++   G  P+V +Y  V+ G CK  +
Sbjct: 1079 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 1138

Query: 241  SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +E + LL + +     P++VTFNT+ +  CK         L  L+++  C P+ ++Y++
Sbjct: 1139 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 1198

Query: 301  LLNGLLKWGKIRPAVSIFKEMVR-FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L++GL K  +   A  + +EM R  G   D    N+++ GLC     +   ++ AY++F 
Sbjct: 1199 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLC-----KSKRVDRAYKLFL 1253

Query: 360  KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            +M       D  TY IVI +L K +  DEA   L   ++ G  P  IT+  +I   C  G
Sbjct: 1254 QMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTG 1313

Query: 420  KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +DKAL +L L+      P   ++ + I  L +  +   A  L    L+ G++P
Sbjct: 1314 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 1367



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 204/415 (49%), Gaps = 10/415 (2%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            KA  L E   +   + + G + ++  +N ++     L   + A     E    G  PN  
Sbjct: 995  KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T+++++  +C      +A  +++ M + GY PN+ T+  L++  CK   ++ A ++L  M
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             + GC PN+ +YN ++ GLC   +V E   +L  + ++   PD+ T+  ++D  CK  R 
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 1174

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM-KKRNCLPDKISYST 300
            + A EL N   E G TPN+VT+N+L +G CK     +   LL+ M +K+ C PD I+Y+T
Sbjct: 1175 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 1234

Query: 301  LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
            +++GL K  ++  A  +F +M+  G   D+   + ++  LC   W     +++A  V E 
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC--KWR---FMDEANNVLEL 1289

Query: 361  MTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            M K  +  DPG  TYG +I    K    D+AL  L   +  G  P  +TF+  I  L   
Sbjct: 1290 MLK--NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR 1347

Query: 419  GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            G++ +A  LL  M     +P   +Y+ L+        + DA  L+    + G  P
Sbjct: 1348 GRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEP 1402



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 190/389 (48%), Gaps = 40/389 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   + D + + G   +V  +  L+     + + + AV+   + +  G  PN+ 
Sbjct: 312 KLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAI 371

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  +C +ND   A +V+  M   G  P+   ++ +++  CK+G+L+EA ++L+QM
Sbjct: 372 TYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQM 431

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML-----MNVKNDGLK-------------- 222
            R GC+P++   + L+  LC    ++ A E+L     M+   D +               
Sbjct: 432 IRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRL 491

Query: 223 ----------------PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                           PDV TY +V+DG CK  R N+A  L +     GV P+VVT++ +
Sbjct: 492 PEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIV 551

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            + +CK+        +L+ MK+  C+PD ++YS L+NGL K G +  A  +F+EM+  G 
Sbjct: 552 IHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGC 611

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             +    N+L+ GLC     + + +E A ++ E M K+    D  TY  +I  L    + 
Sbjct: 612 APNLVTYNTLIDGLC-----KINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRL 666

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           +EA   L    + G +P  +T+  +++AL
Sbjct: 667 EEAWRVLREMKDKGCLPDRMTYGTLLRAL 695



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 196/414 (47%), Gaps = 5/414 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA+ ++  + + + +   G    V  +  ++  L  L++ + A +   +    G  PN  
Sbjct: 277 KANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVI 336

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  ++  +C   D   A +++  M + GY PN  T+  +++  C+   ++ A +VL  M
Sbjct: 337 TYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMM 396

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC P+   Y+ ++ G C  G++ EA+++L  +   G +PDV   + ++D  CK    
Sbjct: 397 IQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAI 456

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A ELL  +I     P+VV ++ L +  CK     +    L +M K  C PD ++Y+++
Sbjct: 457 DSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSV 516

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K  +I  A  +F  M   G   D    + ++   C     + + L+ A+++ E+M
Sbjct: 517 VDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFC-----KDNNLDSAFKMLERM 571

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +   V D  TY  +I  L K    D+A       +  G  P  +T+N +I  LC   K+
Sbjct: 572 KEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKV 631

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           ++A  +L +M + +  P   +Y  LI  L    +  +A  +      +G +P R
Sbjct: 632 EQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDR 685



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 165/312 (52%), Gaps = 9/312 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+E  D+ + + + G    V+  + L+ AL      ++A +    +     AP+  
Sbjct: 417 KAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVV 476

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +SI+I   C      EA   +D M  N  +P+V T+  +V+ LCKS R+ +A  + D+M
Sbjct: 477 AYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRM 536

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ TY+ ++   C    ++ A++ML  +K     PDV TY+A+++G CK G  
Sbjct: 537 RAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTV 596

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A ++  E +  G  PN+VT+NTL +G CK     +   +L++M+K++C PD I+Y+ L
Sbjct: 597 DKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCL 656

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL    ++  A  + +EM   G   D     +LLR L     ++ + LE    + E++
Sbjct: 657 INGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRAL-----QKTNNLE----LVEQL 707

Query: 362 TKKVSVTDPGTY 373
            K++  T+ G +
Sbjct: 708 LKEMEATEEGQW 719



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 6/337 (1%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K   ++    +  S+ + G   +V  +N ++  L    +    V    +  S    P+  
Sbjct: 1100 KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIV 1159

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            TF+ +I   C       A ++ + + ++G  PN+ T+  LV+ LCKS R  +A  +L +M
Sbjct: 1160 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 1219

Query: 182  GR-IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             R  GC P+I TYN ++ GLC   RV+ AY++ + + +DGL PD  TY+ V+   CK   
Sbjct: 1220 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 1279

Query: 241  SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +EA  +L   ++ G  P  +T+ TL +G+CK G   K + +L+L+  +   PD +++S 
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 1339

Query: 301  LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
             ++ L K G++R A  + + M+R G   D    N+LL+G C     +  L EDA  +FE 
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC-----DASLTEDAVDLFEV 1394

Query: 361  MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            M +     D  TY  ++  L   K   + L  +  ++
Sbjct: 1395 MRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSM 1431



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 166/325 (51%), Gaps = 8/325 (2%)

Query: 150  GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
            GY+ +  T   L+ +L +  R K+AL+V     ++ C PN+ T+  L+ GLC  G +  A
Sbjct: 839  GYNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTILIHGLCRAGDIGTA 896

Query: 210  YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG-VTPNVVTFNTLFN 268
            YE+L  +   G+  +V  +  V+ G C   + + A+EL  E  E G   P+V T++T+ +
Sbjct: 897  YELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVD 956

Query: 269  GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
               K G       L++ M  + C P+ ++YS+LL+GL K GK+  A ++ + M R G   
Sbjct: 957  SLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP 1016

Query: 329  DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
            +    N+++ G C     +   +++AY + E+M       +  TY +++    K  K ++
Sbjct: 1017 NIVTYNTIIDGHC-----KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 1071

Query: 389  ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
            A+  +   +E G++P   T+N+++   C + ++++A  LL  M +   +P+  SY+ +I 
Sbjct: 1072 AIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIA 1131

Query: 449  KLDQLEKSYDACALYGAALKQGVIP 473
             L +  K ++   L    L    +P
Sbjct: 1132 GLCKATKVHEGVLLLEQMLSNNCVP 1156



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 158/355 (44%), Gaps = 45/355 (12%)

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           Y   +D F +R       +  +  +  T++ L++   ++G++  A E+ D+M R G K +
Sbjct: 142 YSQAHDLFRSR------IEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAH 195

Query: 190 IQTYNCLLKGLCYVG----------------------------------RVEEAYEMLMN 215
              +  +L+GLC  G                                  R+++A  +L  
Sbjct: 196 AGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEE 255

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           + ++G  P+V++Y  V+ GFCK  R   A+ LL + + RG  P+VV++ T+ NG CK   
Sbjct: 256 MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQ 315

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   ++  M +R C P+ I+Y TL++G  + G +  AV + ++M   G+  +    N+
Sbjct: 316 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 375

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           ++   C      ++ +E A+QV + M +     D   Y  +I    K  K  EA   L  
Sbjct: 376 IMHVFC-----RRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQ 430

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            I  G  P     + +I ALC    ID A  LL +       P   +Y +LI  L
Sbjct: 431 MIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHAL 485



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 124/262 (47%), Gaps = 6/262 (2%)

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           R G +  I   NCLL  L    +  +A+++  +        D  TY+ ++ GF + G+  
Sbjct: 119 RDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKIL 178

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
            A EL +E   +G+  +     ++  G C  G     V   + M K  C PD ++Y+T++
Sbjct: 179 PAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMI 237

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           NGL K  ++  A+ + +EMV  GF  +    N++L G C     + + +E+A  + E+M 
Sbjct: 238 NGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFC-----KANRVENALWLLEQMV 292

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            +    D  +Y  VI  L K  + DEA   +   I+ G  P  IT+  ++   C  G +D
Sbjct: 293 TRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 352

Query: 423 KALLLLFLMYEHAKIPSRTSYD 444
            A+ L+  M E    P+  +Y+
Sbjct: 353 GAVELVRKMTERGYRPNAITYN 374



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 6/180 (3%)

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D ++YSTL++G ++ GKI PA  +F EM R G +    +  S+LRGLC     +     D
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLC-----DAGQCSD 214

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A   F +M+K     D  TY  +I  L K  + D+A+  L   ++ G  P   ++N V+ 
Sbjct: 215 AVLHFREMSKTCP-PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLH 273

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             C   +++ AL LL  M      P   SY  +I  L +L++  +AC +    +++G  P
Sbjct: 274 GFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQP 333



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 130/339 (38%), Gaps = 92/339 (27%)

Query: 77   KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
            +K G +  +  +N ++  L      + A K F +  S GLAP+  T+SI+I   C     
Sbjct: 1221 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFM 1280

Query: 137  FEARKVIDCMFDNGY-----------------------------------HPNVTTFTIL 161
             EA  V++ M  NG+                                   +P+V TF+I 
Sbjct: 1281 DEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 1340

Query: 162  VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
            ++ L K GRL++A E+L+ M R G  P+  TYN LLKG C     E+A ++   ++  G 
Sbjct: 1341 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGC 1400

Query: 222  KPDVYTYT---------------------------------------------------- 229
            +PD  TYT                                                    
Sbjct: 1401 EPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGC 1460

Query: 230  AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            A++D F K G   +A ++     +R    NVV ++ +   Y       +  GL ++M   
Sbjct: 1461 AIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLE 1516

Query: 290  NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR-FGFE 327
               PD +++ +LL      G +  AV  F  + R +G E
Sbjct: 1517 GVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLE 1555



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 51/276 (18%), Positives = 118/276 (42%), Gaps = 18/276 (6%)

Query: 57   FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
            F+D + K   L++  ++ +++ + G       +N LL      +  E AV  F      G
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG 1399

Query: 116  LAPNSWTFSIMIRCYCNKNDFFEA-RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
              P++ T++ ++    +K  + +   +V   M D G+  N    + L  S+     ++  
Sbjct: 1400 CEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLG 1459

Query: 175  LEVLDQMGRIGC------------KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
              ++D  G+ G             + N+  ++ +L    +  + E+A+ +   +  +G++
Sbjct: 1460 CAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVE 1519

Query: 223  PDVYTYTAVMDGFCKVGRSNEAM-ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PD  T+ +++   C  G  + A+ E ++ + + G+ P V  F+ + +   + G   +   
Sbjct: 1520 PDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAED 1579

Query: 282  LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            L+  M    C P   +++ LL+     G    A+ +
Sbjct: 1580 LMLGMP---CKPSAATWNCLLSAYKICGDFERALRV 1612



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 10/156 (6%)

Query: 88   FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA-RKVIDCM 146
            ++ +L   V   ++E A   +      G+ P++ TF  ++   C+      A  + +   
Sbjct: 1490 WSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSIS 1549

Query: 147  FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
             D G  P V  F+ +++ L   GRL    E  D M  + CKP+  T+NCLL      G  
Sbjct: 1550 RDYGLEPGVDHFSCVIDLL---GRLGLVNEAEDLMLGMPCKPSAATWNCLLSAYKICGDF 1606

Query: 207  EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
            E A      ++   L P   +Y  + + + +  +SN
Sbjct: 1607 ERA------LRVAELNPTQASYLLLSNMYAQYDKSN 1636


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 220/486 (45%), Gaps = 69/486 (14%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNS 120
           K   +KE  D+F+  +  G + +V  +N ++  L      E A+  + + A  +G  P  
Sbjct: 42  KQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTV 101

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+S +I   C  ++  +  K+++ M   G  PN  T+  LVN+L   GR KEA  +L+Q
Sbjct: 102 VTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQ 161

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML--MNVKNDGLKPDVYTYTAVMDGFCKV 238
           M   GC P + T+  ++KGLC  G +E A+ ++  M +   GL PDV T+ +V+DG CK 
Sbjct: 162 MAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKE 221

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGY--------------------CKEGTPMK 278
            R  +A  +   A+ERG  PNVVT++TL +G                     C+  T   
Sbjct: 222 QRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 281

Query: 279 GV---GLLKL------------MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
                GLLK+            M+   CLPD ++Y+TL++G  K  ++R AV + +EM+ 
Sbjct: 282 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 341

Query: 324 FGFEVDERMMNSLLRGLCMKSW--EEKDLLE----------------------------D 353
            GF        +L  GLC      E  ++L+                            +
Sbjct: 342 AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 401

Query: 354 AYQVFEKMTK-KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           A   FEKM + +V       Y  +I  L K  K DEA   L   I  G IP  +TF+ +I
Sbjct: 402 ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILI 461

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             LC  G+ID  L L   M E   +P   +Y  L+ +L +  +  +A  L+      G+ 
Sbjct: 462 NGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLS 521

Query: 473 PQRKPQ 478
           P R  +
Sbjct: 522 PDRSTR 527



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 204/401 (50%), Gaps = 18/401 (4%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA--SSYGLAPNSWTFS 124
           KE   + + +  +G    +  F  ++  L    E E A +   E      GL+P+  TF+
Sbjct: 153 KEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFN 212

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            ++   C +    +A  V     + G  PNV T++ L++ L K  ++ EAL++L +M  +
Sbjct: 213 SVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL 272

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           GC+ N  TY+ ++ GL  VGR+E+A  +L  +++ G  PD  TY  ++DGF K  R  EA
Sbjct: 273 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA 332

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           + LL E +E G  P+VVT+ TL +G C+ G   + V +L  M  R C P+ I+YS++++G
Sbjct: 333 VGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDG 392

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMM------NSLLRGLCMKSWEEKDLLEDAYQVF 358
           L K G++  A+  F++M R     DE +       ++L+ GLC         +++AY+  
Sbjct: 393 LCKAGRVTEALGYFEKMAR-----DEVVAPHVIAYSALIDGLCKAGK-----IDEAYEFL 442

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           E+M +   + D  T+ I+I  L    + D  L       E G +P  +T+  ++  LC  
Sbjct: 443 ERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRA 502

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
            ++D+A  L   M      P R++   +I  L ++ +  DA
Sbjct: 503 SRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 181/352 (51%), Gaps = 8/352 (2%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI   C      +A  +   M D   +P+V T+  L++ L K  R+KEA ++ ++    G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK-NDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           C P + TYN ++ GLC  GR+E A  +  ++  + G +P V TY+ ++DG C+    ++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            +LL E   RG  PN VT+NTL N    +G   +   LL+ M    C P+ I++  ++ G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 305 LLKWGKIRPAVSIFKE--MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           L K G+I  A  +  E  M+  G   D    NS+L GLC    +E+ +L DA+ VF++  
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLC----KEQRIL-DAHNVFKRAL 235

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           ++    +  TY  +I  L K  K DEAL  L   +E+G    T+T++ V+  L   G+++
Sbjct: 236 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 295

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            A+++L  M +   +P   +Y+ LI    + ++  +A  L    L+ G  P 
Sbjct: 296 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS 347



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 151/280 (53%), Gaps = 1/280 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + + E + +   + + G   +   ++ ++  L+ +   E AV    +    G  P++ 
Sbjct: 255 KMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAV 314

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +  +    EA  ++  M + G+HP+V T+T L + LC+SGR  EA+E+LD M
Sbjct: 315 TYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYM 374

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKVGR 240
              GC PN  TY+ ++ GLC  GRV EA      +  D  + P V  Y+A++DG CK G+
Sbjct: 375 AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGK 434

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA E L   I  G  P+VVTF+ L NG C  G    G+ L + M +R C+PD ++Y+T
Sbjct: 435 IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYAT 494

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           L++ L +  ++  A  +F++M   G   D     +++ GL
Sbjct: 495 LVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 180/387 (46%), Gaps = 43/387 (11%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A+  F +     + P+  T+  +I     +    EA  + +     G HP V T+  +
Sbjct: 12  DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 71

Query: 162 VNSLCKSGRLKEAL------------------------------------EVLDQMGRIG 185
           ++ LCK GR++ AL                                    ++L++M   G
Sbjct: 72  IDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRG 131

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN  TYN L+  L   GR +EA+ +L  +  +G  P++ T+  ++ G CK G    A 
Sbjct: 132 CAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAF 191

Query: 246 ELLNE--AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
            +++E   IE G++P+V+TFN++ +G CKE   +    + K   +R C P+ ++YSTL++
Sbjct: 192 RVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLID 251

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL K  K+  A+ +  +MV  G   +    ++++ GL +K       +EDA  V  +M  
Sbjct: 252 GLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL-LKVGR----MEDAVVVLRQMRD 306

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
              + D  TY  +I    K ++  EA+  L   +E G  P  +T+  +   LC  G+ D+
Sbjct: 307 AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDE 366

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKL 450
           A+ +L  M      P+  +Y  ++  L
Sbjct: 367 AVEILDYMAARGCAPNAITYSSIVDGL 393



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 1/190 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNS 120
           ++    E ++I D +   G   +   ++ ++  L        A+ +F + A    +AP+ 
Sbjct: 360 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 419

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             +S +I   C      EA + ++ M   G  P+V TF+IL+N LC +GR+   LE+   
Sbjct: 420 IAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRG 479

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC P++ TY  L+  LC   RV+EA+++   +++DGL PD  T   ++ G  +V R
Sbjct: 480 MAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNR 539

Query: 241 SNEAMELLNE 250
             +A  + +E
Sbjct: 540 DEDAKRIQDE 549


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 216/427 (50%), Gaps = 6/427 (1%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           +P S      +D + KA  L +  ++F  +   G   S   +  L+  L M N  + A +
Sbjct: 7   SPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F++ +  G  P+  T+++MI   C +    EA  +I  M ++G+ P+V T+  +++ LC
Sbjct: 67  LFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KS R++EAL + ++M R+GC PN +++N ++ GLC   ++++A ++   ++   + PD +
Sbjct: 127 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW 186

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           +Y  ++DG  K G+ NEA +L    ++ G+TP+ VT+N + +G C   T  + + L K M
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           + + C P + +++ L++   K GK+  A  + K M   G   D    ++L+ GLC  +  
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR- 305

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
               ++DA  + E M K+       T   +I  L K  +  EA   L   +  G  P  +
Sbjct: 306 ----VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           T+N ++   C  G+ ++A  LL  M      P+  +Y  L++ L +  +  +AC ++   
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421

Query: 467 LKQGVIP 473
              G  P
Sbjct: 422 KSSGCAP 428



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 205/418 (49%), Gaps = 11/418 (2%)

Query: 16  NRRNHNKI----PQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERI 70
           NRR+HN I     Q +K +  A       E+ D+   P S      +D + KA  L E  
Sbjct: 149 NRRSHNTIILGLCQQSK-IDQACQVFHEMEAKDIP--PDSWSYGILIDGLAKAGKLNEAY 205

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
            +F  +   G   S   +N ++  + +    + A++ F    S G  P+ +TF+I+I  +
Sbjct: 206 KLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH 265

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +    EA +++  M D+G+ P+V T++ L++ LC   R+ +A  +L+ M +  CKP +
Sbjct: 266 CKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 325

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            T N L+ GLC  GR++EA E+L  + + G  PDV TY  ++ G C+ G++  A ELL++
Sbjct: 326 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 385

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + RG+ PNVVT+  L +G CK     +  G+   MK   C P+  +Y+ L+ G    G+
Sbjct: 386 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 445

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +   + +F EMV  G   D  +  +L   LC KS      LE   +  E +  +    + 
Sbjct: 446 VDGGLKLFGEMVCAGISPDHVVYGTLAAELC-KSGRSARALEILREGRESLRSEAWGDE- 503

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             Y   +  L +  K + AL  +   +  G +P      +++  LC  G+  +A  +L
Sbjct: 504 -VYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVL 560



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 176/358 (49%), Gaps = 5/358 (1%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           ++P+SW++ I+I          +AR +   +  +G  P+   +T L++ LC +    +A 
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           E+   M R GC P+  TYN ++   C  G +EEA +++  +  DG  PDV TY  VMDG 
Sbjct: 66  ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK  R  EA+ L NE    G TPN  + NT+  G C++    +   +   M+ ++  PD 
Sbjct: 126 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDS 185

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
            SY  L++GL K GK+  A  +F+ M+  G        N ++ G+C+        L++A 
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAY-----TLDEAL 240

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++F+ M  K       T+ I+I    K  K DEA   L    + GH+P  +T++ +I  L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           C   ++D A  LL  M +    P+  + + LI  L +  +  +A  +  A +  G  P
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP 358



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 154/314 (49%), Gaps = 5/314 (1%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M +    P+  ++ IL++ L K+G+L +A  +  ++   G  P+   Y  L+ GLC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            ++A E+  ++   G  P   TY  ++D  CK G   EA +L+ + IE G  P+VVT+NT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + +G CK     + + L   M++  C P++ S++T++ GL +  KI  A  +F EM    
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM---- 176

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            E  +   +S   G+ +    +   L +AY++F++M          TY +VI  +     
Sbjct: 177 -EAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYT 235

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            DEAL         G  P   TFN +I A C  GK+D+A  LL  M +   +P   +Y  
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST 295

Query: 446 LITKLDQLEKSYDA 459
           LI+ L  + +  DA
Sbjct: 296 LISGLCSIARVDDA 309



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 40/194 (20%)

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M +RN  PD  SY  L++GL K GK+  A ++F++++  G         SL+ GLCM + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                 +DA ++F  M ++                                   G  P  
Sbjct: 61  -----FDDARELFADMNRR-----------------------------------GCPPSP 80

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           +T+N +I A C  G +++A  L+  M E   +P   +Y+ ++  L +  +  +A  L+  
Sbjct: 81  VTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNE 140

Query: 466 ALKQGVIPQRKPQD 479
             + G  P R+  +
Sbjct: 141 MERLGCTPNRRSHN 154


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 210/412 (50%), Gaps = 8/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KAS   +  ++   +   G       FN ++  L    + E A    +  +     P+  
Sbjct: 22  KASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCC 81

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C + +   A+ ++D    +G+ P+V T++IL + LCK GR+ EA E++ +M
Sbjct: 82  TYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM 141

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PN+ TYN L+ GLC   + E+AYE+L  + + G  PDV TYT ++DG CK GR 
Sbjct: 142 SGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRL 201

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A++++   ++RG TP+V+T+  L  G C+ G   +   + K M  ++C  D ++Y +L
Sbjct: 202 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 261

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG  K  + + A  +  + +R    +D  + N+L+ G C +       L++   VFE M
Sbjct: 262 VNGYCKSSRTKEAQKVV-DGIRGTPYID--VYNALMDGYCKEGR-----LDEIPNVFEDM 313

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +  V +  TY IV+  L K  K DEA   L      G +P  +++N +I  L    K 
Sbjct: 314 ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKP 373

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +A  +L  M +    P   +Y+ L+ +  + E+  DA  +    +K GV P
Sbjct: 374 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP 425



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 193/390 (49%), Gaps = 37/390 (9%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           +AP+ +T++I+I   C  +   +A +++  M D G  P+  TF  +++ LCK+G+ + A 
Sbjct: 6   VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            +L  M    C+P+  TYN L+ GLC    V+ A  ++    + G  PDV TY+ + DG 
Sbjct: 66  SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK GR +EA EL+ E    G TPN+VT+NTL +G CK     K   LL+ +     +PD 
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           ++Y+ +++GL K G++  A+ + + M++ G         +L+ GLC         +++A+
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGR-----VDEAH 240

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA-----------LIHLHHAIEMGH--- 401
            +F++M  K    D   Y  ++    K  +T EA            I +++A+  G+   
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 402 ------------------IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
                             +P   T+N V+  LC  GK+D+A   L  M+    +P   SY
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +++I  L +  K  +A  +    ++ G+ P
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPP 390



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 213/447 (47%), Gaps = 42/447 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L + + + + + K G   SV  +  L+  L      + A   F E  S     ++ 
Sbjct: 197 KEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADAL 256

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  ++  YC  +   EA+KV+D +      P +  +  L++  CK GRL E   V + M
Sbjct: 257 AYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDM 313

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PNI+TYN ++ GLC  G+V+EA+  L ++ + G  PDV +Y  ++DG  K  + 
Sbjct: 314 ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKP 373

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA ++L++ I+ G+ P+ VT+NTL   +CKE      VG+LK M K    PD ++Y+TL
Sbjct: 374 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL 433

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDE-RMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++GL +  ++  A  +  EM+R G  V      N+++  LC     ++  L+ A  + + 
Sbjct: 434 ISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLC-----KEGCLKQALLLMDH 488

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEA-------------------LIHLHHAIEM-- 399
           MT      +  TY I I  L K  + DEA                   +I L  A ++  
Sbjct: 489 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDR 548

Query: 400 ------------GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                       G    + TFN +I A     ++D+AL LL LM +    PS  +Y+M+I
Sbjct: 549 ASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVI 608

Query: 448 TKLDQLEKSYDACALYGAALKQGVIPQ 474
           T L +L+K   A  L+     +G++  
Sbjct: 609 TCLCKLDKVDKAWELFDEMAVRGIVAS 635



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 190/401 (47%), Gaps = 27/401 (6%)

Query: 47  ENPRSLQAQRFVDRIKASP-----------------LKERIDIFDSIKKDGTNWSVSDFN 89
           ++ R+ +AQ+ VD I+ +P                 L E  ++F+ +   G   ++  +N
Sbjct: 267 KSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYN 326

Query: 90  DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
            ++  L    + + A  F     S G  P+  +++I+I      +   EAR+V+D M   
Sbjct: 327 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA 386

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G  P+  T+  L+   CK  R  +A+ +L  M + G  P+  TYN L+ GL    R+ +A
Sbjct: 387 GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDA 446

Query: 210 YEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           YE++   ++N  +     TY  ++D  CK G   +A+ L++     GV  N VT+N   +
Sbjct: 447 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFID 506

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-GFE 327
             CKEG   +   LL  M   + L D++SY+T++ GL K  ++  A  + +EMV   G  
Sbjct: 507 RLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLC 563

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           +     N L+      ++ +   L++A  + E M ++       TY +VI  L K  K D
Sbjct: 564 ITSHTFNLLI-----DAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVD 618

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +A          G +  ++++  +I  LCG+G+  +AL +L
Sbjct: 619 KAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVL 659



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 150/341 (43%), Gaps = 45/341 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KAS  KE   + D + + G       +N L+         + AV         G+ P++ 
Sbjct: 369 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 428

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV-TTFTILVNSLCKSGRLKEALEVLDQ 180
           T++ +I      N   +A +++  M  NG   +  TT+  +++ LCK G LK+AL ++D 
Sbjct: 429 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH 488

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML--MNVKND------------------- 219
           M   G + N  TYN  +  LC  GR++EA  +L  M+   D                   
Sbjct: 489 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDR 548

Query: 220 ------------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
                       GL    +T+  ++D F K  R +EA+ LL   ++RG +P+V+T+N + 
Sbjct: 549 ASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVI 608

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              CK     K   L   M  R  +   +SY+ L+ GL   G+ + A+ + +EM     E
Sbjct: 609 TCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCE 668

Query: 328 VDE---RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
           +D+   R +   LRG        +   E+A ++  +MT K+
Sbjct: 669 IDDLKCRKLYLALRG--------QGRGEEAAELLRRMTTKM 701



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 40/233 (17%)

Query: 253 ERGVTPNVVTFNTLFNGYCKEG-----------------TP--------MKGV------- 280
           ER V P+V T+N L +G CK                   TP        M G+       
Sbjct: 3   ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 62

Query: 281 ---GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
               LL +M +RNC P   +Y+TL++GL K   +  A ++  E V  GF  D    + L 
Sbjct: 63  RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            GLC +       +++A+++ ++M+      +  TY  +I  L K  KT++A   L   +
Sbjct: 123 DGLCKRGR-----IDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLV 177

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             G +P  +T+  ++  LC EG++DKAL ++  M +    PS  +Y  L+  L
Sbjct: 178 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 230



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 5/188 (2%)

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M +R   PD  +Y+ L++GL K  K   A  +  EMV  G   D    NS++ GLC    
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            E+     A+ +   M ++       TY  +I  L K +  D A   +   +  G +P  
Sbjct: 61  FER-----AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDV 115

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           +T++ +   LC  G+ID+A  L+  M  +   P+  +Y+ LI  L +  K+  A  L   
Sbjct: 116 VTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLET 175

Query: 466 ALKQGVIP 473
            +  G +P
Sbjct: 176 LVSSGFVP 183



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 5/196 (2%)

Query: 57  FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
            +DR+ K   LK+ + + D +   G   +   +N  +  L      + A    SE  +  
Sbjct: 469 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL- 527

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD-NGYHPNVTTFTILVNSLCKSGRLKEA 174
              +  +++ +I   C       A K+   M    G      TF +L+++  K+ RL EA
Sbjct: 528 --RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEA 585

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L +L+ M + GC P++ TYN ++  LC + +V++A+E+   +   G+     +YT ++ G
Sbjct: 586 LTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYG 645

Query: 235 FCKVGRSNEAMELLNE 250
            C  GR  EA+++L E
Sbjct: 646 LCGQGRGKEALQVLEE 661


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 222/441 (50%), Gaps = 19/441 (4%)

Query: 18  RNHNKIPQ---FNKLVVFAAASLSTAESLDLKENPRSLQAQR-------FVDRI-KASPL 66
           R    +P    +N ++     + +TA++LD     RS++ ++        +D + KA+ L
Sbjct: 86  RESGPVPDAAIYNFVIHALCKARNTAKALDYF---RSMECEKNVITWTIMIDGLCKANRL 142

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
            E    F  +KK GT  +   +N L+     +++   A     E    GLAPN  T+S +
Sbjct: 143 PEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTV 202

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I  +C +     A K+   M +NG  PN+ T+  L++ LC++G + EA E+LD+M   G 
Sbjct: 203 IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 262

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +P+  +Y+ L+ GLC  G+++ A ++  +  N    PDV  Y+ ++ G CK GR +EA +
Sbjct: 263 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACK 322

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L  +  E    P+VVTF  L +G CK     +   +L+ M+ RNC P+ I+YS+L++GL 
Sbjct: 323 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 382

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G++R A  +FK M+  G E +    NSL+ G CM +  +  LL     + E+MT    
Sbjct: 383 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL-----LMEEMTATGC 437

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           + D  TY  +I  L K  +  EA             P  IT++ +I   C   +ID A  
Sbjct: 438 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 497

Query: 427 LLFLMYEHAKIPSRTSYDMLI 447
           L   M + A +P   ++  L+
Sbjct: 498 LFDDMLKQAVLPDVVTFSTLV 518



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 208/414 (50%), Gaps = 12/414 (2%)

Query: 62  KASPLKERIDIFDSIK--KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           KA    + +D F S++  K+   W++     ++  L   N    A  +F++    G  PN
Sbjct: 106 KARNTAKALDYFRSMECEKNVITWTI-----MIDGLCKANRLPEATTYFAKMKKKGTVPN 160

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            WT++++I  +C  +    A  ++  M ++G  PNV T++ +++  C+  ++  A ++  
Sbjct: 161 EWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFR 220

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           QM   GC PN+ TYN LL GLC  G ++EAYE+L  ++  GL+PD ++Y  +M G CK G
Sbjct: 221 QMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTG 280

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           + + A+++  +       P+VV ++TL  G CK G   +   L + M++ +C PD ++++
Sbjct: 281 KIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFT 340

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L++GL K  +++ A  + + M       +    +SL+ GLC         + DA +VF+
Sbjct: 341 ALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQ-----VRDAQEVFK 395

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M  +    +  TY  +I         D AL+ +      G +P  IT+N +I  LC  G
Sbjct: 396 RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTG 455

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +  +A  L   M      P   +Y  LI    +LE+   A  L+   LKQ V+P
Sbjct: 456 RAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLP 509



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 191/382 (50%), Gaps = 5/382 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E  ++ D +++ G       ++ L+  L    + + A+K F + S+    P+   +S 
Sbjct: 247 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 306

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA K+ + M +N   P+V TFT L++ LCK  RL+EA +VL+ M    
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN+ TY+ L+ GLC  G+V +A E+   +   G++P+V TY +++ GFC     + A+
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 426

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L+ E    G  P+++T+NTL +G CK G   +   L   MK + C PD I+YS L+ G 
Sbjct: 427 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 486

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  +I  A ++F +M++     D    ++L+ G C        L++DA ++ E+M    
Sbjct: 487 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYC-----NAGLVDDAERLLEEMVASD 541

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY  ++    K  +  EA   L    + G  P  +T+  +I A C  GK   A 
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 601

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
            LL  M  +   P+  +Y  LI
Sbjct: 602 RLLEEMVGNGVQPNVITYRSLI 623



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 202/438 (46%), Gaps = 42/438 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E   +F+ ++++     V  F  L+  L   +  + A +           PN  
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 372

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I   C      +A++V   M   G  PNV T+  L++  C +  +  AL ++++M
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 432

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P+I TYN L+ GLC  GR  EA  +  ++K     PDV TY+ ++ GFCK+ R 
Sbjct: 433 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 492

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGY------------------------------- 270
           + A  L ++ +++ V P+VVTF+TL  GY                               
Sbjct: 493 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 552

Query: 271 ----CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
               CK G  ++   +LK M KR C P+ ++Y+ L++   + GK   A  + +EMV  G 
Sbjct: 553 VDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGV 612

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV-TDPGTYGIVIRTLGKGKK 385
           + +     SL+ G C         LE+A ++ E++ +  +   D   Y +++  L +  +
Sbjct: 613 QPNVITYRSLIGGFCGTGD-----LEEARKILERLERDENCKADMFAYRVMMDGLCRTGR 667

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI-PSRTSYD 444
              AL  L    + G  PR   +  +I+ LC   ++ KA+ +L  M    K  P+  +Y+
Sbjct: 668 MSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYE 727

Query: 445 MLITKLDQLEKSYDACAL 462
            +I +L +  +  +A AL
Sbjct: 728 AVIQELAREGRHEEANAL 745



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 191/409 (46%), Gaps = 38/409 (9%)

Query: 98  LNEQETAVKFFSEAS-SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
           +++ + A++FF  AS   G   N +T++ +           E   ++   +  G  PNV 
Sbjct: 1   MSDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVF 60

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIG------------------------------- 185
           T+ +++  LCKSG L +A E+L++M   G                               
Sbjct: 61  TYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM 120

Query: 186 -CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
            C+ N+ T+  ++ GLC   R+ EA      +K  G  P+ +TY  +++GFCKV + + A
Sbjct: 121 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 180

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             LL E  E G+ PNVVT++T+ +G+C++        L + M +  C+P+ ++Y+TLL+G
Sbjct: 181 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 240

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L + G +  A  +  EM   G + D+   ++L+ GLC     +   ++ A +VFE  +  
Sbjct: 241 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLC-----KTGKIDMALKVFEDNSNG 295

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D   Y  +I  L K  + DEA        E    P  +TF  ++  LC   ++ +A
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 355

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +L  M +    P+  +Y  LI  L +  +  DA  ++   + +G+ P
Sbjct: 356 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEP 404



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 6/261 (2%)

Query: 68  ERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           ERID    +FD + K      V  F+ L+         + A +   E  +   +P+ +T+
Sbjct: 490 ERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTY 549

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + ++  +C      EAR+V+  M   G  PNV T+T L+++ C++G+   A  +L++M  
Sbjct: 550 TSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVG 609

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMDGFCKVGRSN 242
            G +PN+ TY  L+ G C  G +EEA ++L  ++ D   K D++ Y  +MDG C+ GR +
Sbjct: 610 NGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMS 669

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK-KRNCLPDKISYSTL 301
            A+ELL    + G  P    +  L  G C+     K + +L+ M   R   P+  +Y  +
Sbjct: 670 AALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAV 729

Query: 302 LNGLLKWGKIRPAVSIFKEMV 322
           +  L + G+   A ++  E++
Sbjct: 730 IQELAREGRHEEANALADELL 750


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/386 (32%), Positives = 198/386 (51%), Gaps = 5/386 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA+ L E    F  +KK GT  +   +N L+     +++   A     E    GLAPN  
Sbjct: 19  KANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVV 78

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  +C +     A K+   M +NG  PN+ T+  L++ LC++G + EA E+LD+M
Sbjct: 79  TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM 138

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P+  +Y+ L+ GLC  G+++ A ++  +  N    PDV  Y+ ++ G CK GR 
Sbjct: 139 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRL 198

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA +L  +  E    P+VVTF  L +G CK     +   +L+ M+ RNC P+ I+YS+L
Sbjct: 199 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSL 258

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K G++R A  +FK M+  G E +    NSL+ G CM +  +  LL     + E+M
Sbjct: 259 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL-----LMEEM 313

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           T    + D  TY  +I  L K  +  EA             P  IT++ +I   C   +I
Sbjct: 314 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 373

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI 447
           D A  L   M + A +P   ++  L+
Sbjct: 374 DMARTLFDDMLKQAVLPDVVTFSTLV 399



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 200/397 (50%), Gaps = 10/397 (2%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           +K+   W++     ++  L   N    A  +F++    G  PN WT++++I  +C  +  
Sbjct: 4   EKNVITWTI-----MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKV 58

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
             A  ++  M ++G  PNV T++ +++  C+  ++  A ++  QM   GC PN+ TYN L
Sbjct: 59  HRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL 118

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           L GLC  G ++EAYE+L  ++  GL+PD ++Y  +M G CK G+ + A+++  +      
Sbjct: 119 LSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDC 178

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            P+VV ++TL  G CK G   +   L + M++ +C PD ++++ L++GL K  +++ A  
Sbjct: 179 PPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 238

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           + + M       +    +SL+ GLC         + DA +VF++M  +    +  TY  +
Sbjct: 239 VLETMEDRNCTPNVITYSSLIDGLCKTGQ-----VRDAQEVFKRMIVRGIEPNVVTYNSL 293

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I         D AL+ +      G +P  IT+N +I  LC  G+  +A  L   M     
Sbjct: 294 IHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFC 353

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            P   +Y  LI    +LE+   A  L+   LKQ V+P
Sbjct: 354 NPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLP 390



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 191/382 (50%), Gaps = 5/382 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E  ++ D +++ G       ++ L+  L    + + A+K F + S+    P+   +S 
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 187

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA K+ + M +N   P+V TFT L++ LCK  RL+EA +VL+ M    
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN+ TY+ L+ GLC  G+V +A E+   +   G++P+V TY +++ GFC     + A+
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 307

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L+ E    G  P+++T+NTL +G CK G   +   L   MK + C PD I+YS L+ G 
Sbjct: 308 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 367

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  +I  A ++F +M++     D    ++L+ G C        L++DA ++ E+M    
Sbjct: 368 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYC-----NAGLVDDAERLLEEMVASD 422

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY  ++    K  +  EA   L    + G  P  +T+  +I A C  GK   A 
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 482

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
            LL  M  +   P+  +Y  LI
Sbjct: 483 KLLEEMVGNGVQPNVITYRSLI 504



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 201/438 (45%), Gaps = 42/438 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   +F+ ++++     V  F  L+  L   +  + A +           PN  
Sbjct: 194 KTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 253

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I   C      +A++V   M   G  PNV T+  L++  C +  +  AL ++++M
Sbjct: 254 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 313

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P+I TYN L+ GLC  GR  EA  +  ++K     PDV TY+ ++ GFCK+ R 
Sbjct: 314 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 373

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGY------------------------------- 270
           + A  L ++ +++ V P+VVTF+TL  GY                               
Sbjct: 374 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 433

Query: 271 ----CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
               CK G  ++   +LK M KR C P+ ++Y+ L++   + GK   A  + +EMV  G 
Sbjct: 434 VDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGV 493

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV-TDPGTYGIVIRTLGKGKK 385
           + +     SL+ G C         LE+A ++ E++ +  +   D   Y +++  L +  +
Sbjct: 494 QPNVITYRSLIGGFCGTGD-----LEEARKMLERLERDENCKADMFAYRVMMDGLCRTGR 548

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI-PSRTSYD 444
              AL  L    + G  PR   +  +I+ LC   ++ KA+ +L  M    K  P+  +Y+
Sbjct: 549 MSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYE 608

Query: 445 MLITKLDQLEKSYDACAL 462
            +I +L +  +  +A AL
Sbjct: 609 AVIQELAREGRHEEANAL 626



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 144/288 (50%), Gaps = 5/288 (1%)

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C+ N+ T+  ++ GLC   R+ EA      +K  G  P+ +TY  +++GFCKV + + A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL E  E G+ PNVVT++T+ +G+C++        L + M +  C+P+ ++Y+TLL+GL
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G +  A  +  EM   G + D+   ++L+ GLC         ++ A +VFE  +   
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGK-----IDMALKVFEDNSNGD 177

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D   Y  +I  L K  + DEA        E    P  +TF  ++  LC   ++ +A 
Sbjct: 178 CPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 237

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +L  M +    P+  +Y  LI  L +  +  DA  ++   + +G+ P
Sbjct: 238 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEP 285



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 132/261 (50%), Gaps = 6/261 (2%)

Query: 68  ERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           ERID    +FD + K      V  F+ L+         + A +   E  +   +P+ +T+
Sbjct: 371 ERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTY 430

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + ++  +C      EAR+V+  M   G  PNV T+T L+++ C++G+   A ++L++M  
Sbjct: 431 TSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVG 490

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMDGFCKVGRSN 242
            G +PN+ TY  L+ G C  G +EEA +ML  ++ D   K D++ Y  +MDG C+ GR +
Sbjct: 491 NGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMS 550

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK-KRNCLPDKISYSTL 301
            A+ELL    + G  P    +  L  G C+     K + +L+ M   R   P+  +Y  +
Sbjct: 551 AALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAV 610

Query: 302 LNGLLKWGKIRPAVSIFKEMV 322
           +  L + G+   A ++  E++
Sbjct: 611 IQELAREGRHEEANALADELL 631


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 215/456 (47%), Gaps = 49/456 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K++ L   +++F+ + + G +  V  +N L+ +L    + E A +   + SS G  PN  
Sbjct: 49  KSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVV 108

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCM----------------FDNG--------------- 150
           T+S++I   C      EAR++I  M                F +G               
Sbjct: 109 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 168

Query: 151 --------YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
                     P+  TF+ L++ LCK G++ EA  V D M   G  PN+ TYN L+ GLC 
Sbjct: 169 SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 228

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV-- 260
             ++E A+ M+ ++ + G+ PDV TY+ ++D FCK  R +EA+ELL+    RG TPNV  
Sbjct: 229 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLV 288

Query: 261 ---VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
              VTFN L  G CK G   +   L + M  +N  PD +++  L++GL K G++  A  I
Sbjct: 289 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 348

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
              M   G   +    N+L+ GLC     +   +E+A Q  E+M     V D  TYG ++
Sbjct: 349 LDLMGNLGVPPNVVTYNALVHGLC-----KSGRIEEACQFLEEMVSSGCVPDSITYGSLV 403

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L +  +TD+AL  +      G  P T+T+N ++  L   GK ++A+ +L  M      
Sbjct: 404 YALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQ 463

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P   ++    + L +         L    L +G++P
Sbjct: 464 PDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLP 499



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 202/411 (49%), Gaps = 15/411 (3%)

Query: 62  KASPLKERIDIF-DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +A      ++IF   + +DG   ++  +N ++  L   N+    ++ F E    G  P+ 
Sbjct: 13  RAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDV 72

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I   C   D  EAR++   M   G  PNV T+++L+N LCK GR+ EA E++ +
Sbjct: 73  VTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQE 132

Query: 181 MGRIGCK--PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK--PDVYTYTAVMDGFC 236
           M R  C   PNI TYN  L GLC      EA E++ ++++  L+  PD  T++ ++DG C
Sbjct: 133 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 192

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G+ +EA  + ++ I  G  PNV+T+N L NG CK     +   +++ M  +   PD I
Sbjct: 193 KCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 252

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFG-----FEVDERMMNSLLRGLCMKSWEEKDLL 351
           +YS L++   K  ++  A+ +   M   G        D+   N L+ G C     +    
Sbjct: 253 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGAC-----KAGNF 307

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           E A  +FE+M  K    D  T+G +I  L K  + + A   L     +G  P  +T+N +
Sbjct: 308 EQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNAL 367

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           +  LC  G+I++A   L  M     +P   +Y  L+  L +  ++ DA  L
Sbjct: 368 VHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQL 418



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 150/285 (52%), Gaps = 5/285 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG-----L 116
           KA  ++    + +S+   G    V  ++ L+ A    +  + A++     +S G     L
Sbjct: 228 KADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVL 287

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P+  TF+I+I   C   +F +A  + + M      P+V TF  L++ LCK+G+++ A +
Sbjct: 288 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARD 347

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +LD MG +G  PN+ TYN L+ GLC  GR+EEA + L  + + G  PD  TY +++   C
Sbjct: 348 ILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC 407

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           +  R+++A++L++E    G  P+ VT+N L +G  K G   + + +L+ M  +   PD  
Sbjct: 408 RASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSF 467

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +++   +GL + G +   + + + ++  G   D    +S+L  +C
Sbjct: 468 TFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVC 512



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 137/264 (51%), Gaps = 5/264 (1%)

Query: 62  KASPLKERIDIFDSIKKDGT--NWSVSD---FNDLLMALVMLNEQETAVKFFSEASSYGL 116
           KAS + E +++   +   G   N  V D   FN L+         E A   F E  +  L
Sbjct: 263 KASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 322

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P+  TF  +I   C       AR ++D M + G  PNV T+  LV+ LCKSGR++EA +
Sbjct: 323 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 382

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
            L++M   GC P+  TY  L+  LC   R ++A +++  +K+ G  PD  TY  ++DG  
Sbjct: 383 FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 442

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G++ +A+ +L E + +G  P+  TF   F+G  + G     + LL+++  +  LPD  
Sbjct: 443 KSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDAT 502

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKE 320
           + S++L+ + + GK+    ++ KE
Sbjct: 503 TCSSILDWVCRSGKLDDVKAMIKE 526


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 202/393 (51%), Gaps = 41/393 (10%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           +PN +TF ++++ +C +    +  K+ + M DNG  P+   + IL++   K GR+ EA  
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           + ++M  +G +P+I TYN LL   C   +++EA E+   +   G +PDV TY+ ++ G C
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 237 KVGRSNEAMELL-NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           K G+  EA+E+L ++ IERG + N V +N L NG CK+    +   LL+ M  +  +PD 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 296 ISYSTLLNGLLKWGKIR-----------------------------------PAVSIFKE 320
           I+Y+T+L+GL + GK+                                     A+ +FK+
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           ++  G+  D    NS+L GL  KS      +++A ++F+KM       +  TY IV+   
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSN-----MDEAEEMFKKMVASGCAPNGATYSIVLSGH 299

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            + KK D+A   L    ++G +P  +T+N ++  LC    +DKA  L   M ++   P  
Sbjct: 300 CRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 359

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            SY +++  L +  K +DA  L+   +++ ++P
Sbjct: 360 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVP 392



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 217/430 (50%), Gaps = 18/430 (4%)

Query: 50  RSLQAQRFVDRI------KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET 103
           R     R+  R+      K   L++   +F+ +  +G +    ++N L+         + 
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A + + E  S GL P+ +T++ ++  +C +    EA ++   M + G+ P+V T++ +++
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 164 SLCKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
            LCK+G++ EALE+L  +M   GC  N   YN L+ GLC    +E AY++L  + + G  
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           PD  TY  ++ G C++G+ +EA +  +    RG +P+VV +N L +   KEG   + + L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
            K +  +  +PD ++Y+++L GL +   +  A  +FK+MV  G   +    + +L G C 
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
                   ++DA++V E+M+K  +V D  TY I++  L K    D+A       ++ G  
Sbjct: 302 AKK-----VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA 356

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT------KLDQLEKS 456
           P  ++++ V+  LC   K+  A +L   M E   +P   ++++L+       KLD+ +  
Sbjct: 357 PDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 416

Query: 457 YDACALYGAA 466
            D     G A
Sbjct: 417 LDQMTCSGCA 426



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 151/264 (57%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E    FDS+   G +  V  +N LL AL    + + A+K F +  + G  P++ T++ 
Sbjct: 200 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNS 259

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++     K++  EA ++   M  +G  PN  T++I+++  C++ ++ +A +VL++M +IG
Sbjct: 260 ILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIG 319

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ TYN LL GLC    V++A+E+   + ++G  PD+ +Y+ V++G CK  + ++A 
Sbjct: 320 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDAR 379

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L +  IER + P+VVTFN L +G CK G   +   LL  M    C PD ++Y+TL+NGL
Sbjct: 380 VLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGL 439

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVD 329
            K G+   A  + + M   GF  D
Sbjct: 440 RKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 177/360 (49%), Gaps = 6/360 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK-FFSEASSYGLAPNS 120
           K + +KE +++F ++ + G    V  ++ ++  L    +   A++  F +    G + N+
Sbjct: 90  KETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANT 149

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             ++ +I   C   +   A K+++ M   GY P+  T+  +++ LC+ G++ EA +  D 
Sbjct: 150 VAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDS 209

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P++  YN LL  L   G+ +EA ++  +V   G  PD  TY +++ G  +   
Sbjct: 210 MPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 269

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA E+  + +  G  PN  T++ + +G+C+         +L+ M K   +PD ++Y+ 
Sbjct: 270 MDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNI 329

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LL+GL K   +  A  +F  MV  G   D    + +L GLC     + + + DA  +F++
Sbjct: 330 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLC-----KTNKVHDARVLFDR 384

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++  V D  T+ I++  L K  K DEA   L      G  P  + +N ++  L  +G+
Sbjct: 385 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGR 444



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 150/289 (51%), Gaps = 6/289 (2%)

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN  T+  +LK  C  G++ + Y++   + ++G+ PD   Y  ++DG+ K GR +EA 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  E +  G+ P++ T+N+L N +CKE    + + L K M ++   PD ++YST+++GL
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 306 LKWGKIRPAVS-IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
            K GK+  A+  +F +M+  G   +    N+L+ GLC     + + +E AY++ E+M  K
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLC-----KDENIERAYKLLEEMASK 178

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             V D  TY  ++  L +  K  EA          G+ P  + +N ++ AL  EGK D+A
Sbjct: 179 GYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEA 238

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + L   +     +P   +Y+ ++  L +     +A  ++   +  G  P
Sbjct: 239 MKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAP 287



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 150/332 (45%), Gaps = 46/332 (13%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  + + G + +   +N L+  L      E A K   E +S G  P++ T++ ++   C
Sbjct: 136 LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLC 195

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL---------------- 175
                 EA++  D M   GY P+V  +  L+++L K G+  EA+                
Sbjct: 196 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTV 255

Query: 176 -------------------EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
                              E+  +M   GC PN  TY+ +L G C   +V++A+++L  +
Sbjct: 256 TYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM 315

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
              G  PDV TY  ++DG CK    ++A EL +  ++ G  P++V+++ + NG CK    
Sbjct: 316 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 375

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                L   M +R  +PD ++++ L++GL K GK+  A  +  +M   G   D    N+L
Sbjct: 376 HDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTL 435

Query: 337 LRGL-----------CMKSWEEKDLLEDAYQV 357
           + GL             ++ +EK  L D ++ 
Sbjct: 436 MNGLRKQGRHIQADRLTQAMKEKGFLSDCFKA 467



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 123/233 (52%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K     E + +F  +   G       +N +L+ L   +  + A + F +  + G APN  
Sbjct: 231 KEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGA 290

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI++  +C      +A KV++ M   G  P+V T+ IL++ LCK+  + +A E+   M
Sbjct: 291 TYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P+I +Y+ +L GLC   +V +A  +   +    L PDV T+  +MDG CK G+ 
Sbjct: 351 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 410

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           +EA +LL++    G  P+ V +NTL NG  K+G  ++   L + MK++  L D
Sbjct: 411 DEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 6/221 (2%)

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           R  +PN  TF  +   +CK+G    G  L + M      PD I Y+ L++G  K G++  
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A  +++EMV  G E      NSLL   C ++      +++A ++F+ M +K    D  TY
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETK-----MKEAMELFKTMAEKGFEPDVVTY 116

Query: 374 GIVIRTLGKGKKTDEALIHL-HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
             +I  L K  K  EAL  L H  IE G    T+ +N +I  LC +  I++A  LL  M 
Sbjct: 117 STIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMA 176

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               +P   +Y+ +++ L ++ K  +A   + +   +G  P
Sbjct: 177 SKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP 217



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 13/227 (5%)

Query: 1   MSSLVPSNSFIFTNTNRRNHNKIPQ-FNKLVVFAAASLSTAESLDLKENPRSLQAQRFVD 59
           M   V  NS +     + N ++  + F K+V    A      S+ L  + R   A++  D
Sbjct: 251 MPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR---AKKVDD 307

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
             K         + + + K G    V  +N LL  L   N  + A + FS     G AP+
Sbjct: 308 AHK---------VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             ++S+++   C  N   +AR + D M +    P+V TF IL++ LCK+G+L EA ++LD
Sbjct: 359 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 418

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           QM   GC P+   YN L+ GL   GR  +A  +   +K  G   D +
Sbjct: 419 QMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 218/414 (52%), Gaps = 5/414 (1%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           R++   L + ID+F  + K     S+ DFN LL A+V L + +  +    +    G+  +
Sbjct: 163 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 222

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            +TF+I+I C+C       A  ++  M   GY P+  T   LVN  C+  R+ +A+ ++D
Sbjct: 223 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 282

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M  IG KP+I  YN ++  LC   RV +A++    ++  G++P+V TYTA+++G C   
Sbjct: 283 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 342

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R ++A  LL++ I++ +TPNV+T++ L + + K G  ++   L + M + +  PD ++YS
Sbjct: 343 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 402

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           +L+NGL    +I  A  +F  MV  G   D    N+L+ G C     +   +ED  ++F 
Sbjct: 403 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC-----KAKRVEDGMKLFR 457

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M+++  V++  TY  +I+   +    D+A          G  P   T+N ++  LC  G
Sbjct: 458 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 517

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +++KAL++   M +        +Y  +I  + +  K  +A +L+ +   +G+ P
Sbjct: 518 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 571



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 205/429 (47%), Gaps = 43/429 (10%)

Query: 66   LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            L + + +F  + K     S+ +F+ LL A+  +N+ +  +    +  + G+  N +T+SI
Sbjct: 676  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735

Query: 126  MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM---- 181
            +I C+C ++    A  V+  M   GY PN+ T + L+N  C S R+ EA+ ++DQM    
Sbjct: 736  LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795

Query: 182  ----------------------------GRI---GCKPNIQTYNCLLKGLCYVGRVEEAY 210
                                         R+   GC+P++ TY  ++ GLC  G  + A+
Sbjct: 796  YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 211  EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
             +L  ++   L+P V  Y  ++DG CK    ++A+ L  E   +G+ PNVVT+++L +  
Sbjct: 856  NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915

Query: 271  CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
            C  G       LL  M +R   PD  ++S L++  +K GK+  A  ++ EMV+   +   
Sbjct: 916  CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975

Query: 331  RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +SL+ G CM      D L++A Q+FE M  K    D  TY  +I+   K K+ +E +
Sbjct: 976  VTYSSLINGFCM-----HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 1030

Query: 391  IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                   + G +  T+T+N +IQ L   G  D A  +   M      P+  +Y+ L+  L
Sbjct: 1031 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 1090

Query: 451  ---DQLEKS 456
                +LEK+
Sbjct: 1091 CKNGKLEKA 1099



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 191/370 (51%), Gaps = 5/370 (1%)

Query: 104  AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
            AV    +    G  PN+ TF+ +I      N   EA  +ID M   G  P++ T+ ++VN
Sbjct: 784  AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 843

Query: 164  SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             LCK G    A  +L++M +   +P +  YN ++ GLC    +++A  +   ++  G++P
Sbjct: 844  GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 903

Query: 224  DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            +V TY++++   C  GR ++A  LL++ IER + P+V TF+ L + + KEG  ++   L 
Sbjct: 904  NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 963

Query: 284  KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
              M KR+  P  ++YS+L+NG     ++  A  +F+ MV      D    N+L++G C  
Sbjct: 964  DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC-- 1021

Query: 344  SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
               +   +E+  +VF +M+++  V +  TY I+I+ L +    D A       +  G  P
Sbjct: 1022 ---KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 1078

Query: 404  RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
              +T+N ++  LC  GK++KA+++   +      P+  +Y+++I  + +  K  D   L+
Sbjct: 1079 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 1138

Query: 464  GAALKQGVIP 473
                 +GV P
Sbjct: 1139 CNLSLKGVKP 1148



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 203/408 (49%), Gaps = 5/408 (1%)

Query: 66   LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            + E + + D +   G   +   FN L+  L + N+   A+       + G  P+  T+ +
Sbjct: 781  ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 840

Query: 126  MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            ++   C + D   A  +++ M      P V  +  +++ LCK   + +AL +  +M   G
Sbjct: 841  VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 900

Query: 186  CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             +PN+ TY+ L+  LC  GR  +A  +L ++    + PDV+T++A++D F K G+  EA 
Sbjct: 901  IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 960

Query: 246  ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +L +E ++R + P++VT+++L NG+C      +   + + M  ++C PD ++Y+TL+ G 
Sbjct: 961  KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 1020

Query: 306  LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
             K+ ++   + +F+EM + G   +    N L++GL    ++  D  + A ++F++M    
Sbjct: 1021 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL----FQAGD-CDMAQEIFKEMVSDG 1075

Query: 366  SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
               +  TY  ++  L K  K ++A++   +       P   T+N +I+ +C  GK++   
Sbjct: 1076 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 1135

Query: 426  LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L   +      P   +Y+ +I+   +     +A AL+    + G +P
Sbjct: 1136 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 1183



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 167/332 (50%), Gaps = 5/332 (1%)

Query: 88   FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            +N ++  L      + A+  F E  + G+ PN  T+S +I C CN   + +A +++  M 
Sbjct: 873  YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 932

Query: 148  DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +   +P+V TF+ L+++  K G+L EA ++ D+M +    P+I TY+ L+ G C   R++
Sbjct: 933  ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 992

Query: 208  EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            EA +M   + +    PDV TY  ++ GFCK  R  E ME+  E  +RG+  N VT+N L 
Sbjct: 993  EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 1052

Query: 268  NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             G  + G       + K M      P+ ++Y+TLL+GL K GK+  A+ +F+ + R   E
Sbjct: 1053 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 1112

Query: 328  VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                  N ++ G+C     +   +ED + +F  ++ K    D   Y  +I    +    +
Sbjct: 1113 PTIYTYNIMIEGMC-----KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 1167

Query: 388  EALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            EA        E G +P +  +N +I+A   +G
Sbjct: 1168 EADALFKEMKEDGTLPNSGCYNTLIRARLRDG 1199



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 177/367 (48%), Gaps = 10/367 (2%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K   + + +++F  ++  G   +V  ++ L+  L        A +  S+     + P+ +
Sbjct: 882  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 941

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            TFS +I  +  +    EA K+ D M      P++ T++ L+N  C   RL EA ++ + M
Sbjct: 942  TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 1001

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                C P++ TYN L+KG C   RVEE  E+   +   GL  +  TY  ++ G  + G  
Sbjct: 1002 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 1061

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            + A E+  E +  GV PN++T+NTL +G CK G   K + + + +++    P   +Y+ +
Sbjct: 1062 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 1121

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            + G+ K GK+     +F  +   G + D    N+++ G C K  +     E+A  +F++M
Sbjct: 1122 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK-----EEADALFKEM 1176

Query: 362  TKKVSVTDPGTYGIVIRT-LGKGKKTDEA-LIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
             +  ++ + G Y  +IR  L  G +   A LI    +        TI    ++  +  +G
Sbjct: 1177 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI---GLVTNMLHDG 1233

Query: 420  KIDKALL 426
            ++DK+ L
Sbjct: 1234 RLDKSFL 1240



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 1/299 (0%)

Query: 32   FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
            ++ AS   ++ ++ K NP        +D  +K   L E   ++D + K   + S+  ++ 
Sbjct: 921  WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 980

Query: 91   LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
            L+    M +  + A + F    S    P+  T++ +I+ +C      E  +V   M   G
Sbjct: 981  LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 1040

Query: 151  YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
               N  T+ IL+  L ++G    A E+  +M   G  PNI TYN LL GLC  G++E+A 
Sbjct: 1041 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 1100

Query: 211  EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
             +   ++   ++P +YTY  +++G CK G+  +  +L      +GV P+VV +NT+ +G+
Sbjct: 1101 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 1160

Query: 271  CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            C++G+  +   L K MK+   LP+   Y+TL+   L+ G    +  + KEM   GF  D
Sbjct: 1161 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 1219



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 191/417 (45%), Gaps = 31/417 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  D F  I++ G   +V  +  L+  L   +    A +  S+     + PN  
Sbjct: 305 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 364

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S ++  +       EA+++ + M      P++ T++ L+N LC   R+ EA ++ D M
Sbjct: 365 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 424

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  ++ +YN L+ G C   RVE+  ++   +   GL  +  TY  ++ GF + G  
Sbjct: 425 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 484

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A E  ++    G++P++ T+N L  G C  G   K + + + M+KR    D ++Y+T+
Sbjct: 485 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 544

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G+ K GK+  A S+F  +   G + D     +++ GLC K      LL +   ++ KM
Sbjct: 545 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG-----LLHEVEALYTKM 599

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            ++  + +         TL  G  T  A + +   +  G+ P  +   ++   +C     
Sbjct: 600 KQEGLMKNDC-------TLSDGDITLSAEL-IKKMLSCGYAPSLL--KDIKSGVC----- 644

Query: 422 DKALLLLFLMYEHAKIPSRTSYD----MLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            KAL LL           +TSYD    +    L +L K  DA AL+G  +K    P 
Sbjct: 645 KKALSLL------RAFSGKTSYDYREKLSRNGLSEL-KLDDAVALFGEMVKSRPFPS 694



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/470 (22%), Positives = 199/470 (42%), Gaps = 67/470 (14%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   + E  ++F+ + +   +  +  ++ L+  L + +  + A + F    S G   + 
Sbjct: 374 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 433

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++ +I  +C      +  K+   M   G   N  T+  L+    ++G + +A E   Q
Sbjct: 434 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 493

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P+I TYN LL GLC  G +E+A  +  +++   +  D+ TYT V+ G CK G+
Sbjct: 494 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 553

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA  L      +G+ P++VT+ T+ +G C +G   +   L   MK+   + +  + S 
Sbjct: 554 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 613

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS--------------WE 346
                   G I  +  + K+M+  G+     ++  +  G+C K+              + 
Sbjct: 614 --------GDITLSAELIKKMLSCGYA--PSLLKDIKSGVCKKALSLLRAFSGKTSYDYR 663

Query: 347 EK-------DL-LEDAYQVFEKMTK---------------------KVSVT--------- 368
           EK       +L L+DA  +F +M K                     K  V          
Sbjct: 664 EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 723

Query: 369 -----DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
                +  TY I+I    +  +   AL  L   +++G+ P  +T ++++   C   +I +
Sbjct: 724 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 783

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A+ L+  M+     P+  +++ LI  L    K+ +A AL    + +G  P
Sbjct: 784 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQP 833



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/466 (22%), Positives = 196/466 (42%), Gaps = 67/466 (14%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ + IF+ ++K   +  +  +  ++  +    + E A   F   S  GL P+  T++ 
Sbjct: 519 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 578

Query: 126 MIRCYCNKNDFFEARKVI-----------DCMFDNGYHPNVTTFTILVNSL--------- 165
           M+   C K    E   +            DC   +G   ++T    L+  +         
Sbjct: 579 MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDG---DITLSAELIKKMLSCGYAPSL 635

Query: 166 ---CKSGRLKEALEVL------------DQMGRIGCK--------------------PNI 190
               KSG  K+AL +L            +++ R G                      P+I
Sbjct: 636 LKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSI 695

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             ++ LL  +  + + +    +   ++N G+  + YTY+ +++ FC+  +   A+ +L +
Sbjct: 696 IEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGK 755

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            ++ G  PN+VT ++L NGYC      + V L+  M      P+ ++++TL++GL    K
Sbjct: 756 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 815

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
              A+++   MV  G + D      ++ GLC +   + DL   A+ +  KM +     +P
Sbjct: 816 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG--DTDL---AFNLLNKMEQ--GKLEP 868

Query: 371 GT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           G   Y  +I  L K K  D+AL         G  P  +T++++I  LC  G+   A  LL
Sbjct: 869 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 928

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             M E    P   ++  LI    +  K  +A  LY   +K+ + P 
Sbjct: 929 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 218/414 (52%), Gaps = 5/414 (1%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           R++   L + ID+F  + K     S+ DFN LL A+V L + +  +    +    G+  +
Sbjct: 60  RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            +TF+I+I C+C       A  ++  M   GY P+  T   LVN  C+  R+ +A+ ++D
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M  IG KP+I  YN ++  LC   RV +A++    ++  G++P+V TYTA+++G C   
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R ++A  LL++ I++ +TPNV+T++ L + + K G  ++   L + M + +  PD ++YS
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           +L+NGL    +I  A  +F  MV  G   D    N+L+ G C     +   +ED  ++F 
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC-----KAKRVEDGMKLFR 354

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M+++  V++  TY  +I+   +    D+A          G  P   T+N ++  LC  G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +++KAL++   M +        +Y  +I  + +  K  +A +L+ +   +G+ P
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 149/303 (49%), Gaps = 5/303 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  D F  I++ G   +V  +  L+  L   +    A +  S+     + PN  
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S ++  +       EA+++ + M      P++ T++ L+N LC   R+ EA ++ D M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  ++ +YN L+ G C   RVE+  ++   +   GL  +  TY  ++ GF + G  
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A E  ++    G++P++ T+N L  G C  G   K + + + M+KR    D ++Y+T+
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G+ K GK+  A S+F  +   G + D     +++ GLC K      LL +   ++ KM
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG-----LLHEVEALYTKM 496

Query: 362 TKK 364
            ++
Sbjct: 497 KQE 499



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 128/253 (50%), Gaps = 1/253 (0%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D IKK  T  +V  ++ LL A V   +   A + F E     + P+  T+S +I   C  
Sbjct: 250 DMIKKKITP-NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
           +   EA ++ D M   G   +V ++  L+N  CK+ R+++ +++  +M + G   N  TY
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L++G    G V++A E    +   G+ PD++TY  ++ G C  G   +A+ +  +  +
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           R +  ++VT+ T+  G CK G   +   L   +  +   PD ++Y+T+++GL   G +  
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488

Query: 314 AVSIFKEMVRFGF 326
             +++ +M + G 
Sbjct: 489 VEALYTKMKQEGL 501



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 4/203 (1%)

Query: 66  LKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           L +RID    +FD +   G    V  +N L+         E  +K F E S  GL  N+ 
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+ +    D  +A++    M   G  P++ T+ IL+  LC +G L++AL + + M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +     +I TY  +++G+C  G+VEEA+ +  ++   GLKPD+ TYT +M G C  G  
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486

Query: 242 NEAMELLNEAIERGVTPNVVTFN 264
           +E   L  +  + G+  N  T +
Sbjct: 487 HEVEALYTKMKQEGLMKNDCTLS 509



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 132/284 (46%), Gaps = 10/284 (3%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   + E  ++F+ + +   +  +  ++ L+  L + +  + A + F    S G   + 
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++ +I  +C      +  K+   M   G   N  T+  L+    ++G + +A E   Q
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P+I TYN LL GLC  G +E+A  +  +++   +  D+ TYT V+ G CK G+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA  L      +G+ P++VT+ T+ +G C +G   +   L   MK+   + +  + S 
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 510

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
                   G I  +  + K+M+  G+     ++  +  G+C K+
Sbjct: 511 --------GDITLSAELIKKMLSCGYA--PSLLKDIKSGVCKKA 544


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 218/414 (52%), Gaps = 5/414 (1%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           R++   L + ID+F  + K     S+ DFN LL A+V L + +  +    +    G+  +
Sbjct: 60  RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            +TF+I+I C+C       A  ++  M   GY P+  T   LVN  C+  R+ +A+ ++D
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M  IG KP+I  YN ++  LC   RV +A++    ++  G++P+V TYTA+++G C   
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R ++A  LL++ I++ +TPNV+T++ L + + K G  ++   L + M + +  PD ++YS
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           +L+NGL    +I  A  +F  MV  G   D    N+L+ G C     +   +ED  ++F 
Sbjct: 300 SLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC-----KAKRVEDGMKLFR 354

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M+++  V++  TY  +I+   +    D+A          G  P   T+N ++  LC  G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +++KAL++   M +        +Y  +I  + +  K  +A +L+ +   +G+ P
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 149/303 (49%), Gaps = 5/303 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  D F  I++ G   +V  +  L+  L   +    A +  S+     + PN  
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S ++  +       EA+++ + M      P++ T++ LVN LC   R+ EA ++ D M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLM 321

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  ++ +YN L+ G C   RVE+  ++   +   GL  +  TY  ++ GF + G  
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A E  ++    G++P++ T+N L  G C  G   K + + + M+KR    D ++Y+T+
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G+ K GK+  A S+F  +   G + D     +++ GLC K      LL +   ++ KM
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG-----LLHEVEALYTKM 496

Query: 362 TKK 364
            ++
Sbjct: 497 KQE 499



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 128/253 (50%), Gaps = 1/253 (0%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D IKK  T  +V  ++ LL A V   +   A + F E     + P+  T+S ++   C  
Sbjct: 250 DMIKKKITP-NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLH 308

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
           +   EA ++ D M   G   +V ++  L+N  CK+ R+++ +++  +M + G   N  TY
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L++G    G V++A E    +   G+ PD++TY  ++ G C  G   +A+ +  +  +
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           R +  ++VT+ T+  G CK G   +   L   +  +   PD ++Y+T+++GL   G +  
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488

Query: 314 AVSIFKEMVRFGF 326
             +++ +M + G 
Sbjct: 489 VEALYTKMKQEGL 501



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 4/203 (1%)

Query: 66  LKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           L +RID    +FD +   G    V  +N L+         E  +K F E S  GL  N+ 
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+ +    D  +A++    M   G  P++ T+ IL+  LC +G L++AL + + M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +     +I TY  +++G+C  G+VEEA+ +  ++   GLKPD+ TYT +M G C  G  
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486

Query: 242 NEAMELLNEAIERGVTPNVVTFN 264
           +E   L  +  + G+  N  T +
Sbjct: 487 HEVEALYTKMKQEGLMKNDCTLS 509



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 132/284 (46%), Gaps = 10/284 (3%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   + E  ++F+ + +   +  +  ++ L+  L + +  + A + F    S G   + 
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADV 330

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++ +I  +C      +  K+   M   G   N  T+  L+    ++G + +A E   Q
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P+I TYN LL GLC  G +E+A  +  +++   +  D+ TYT V+ G CK G+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA  L      +G+ P++VT+ T+ +G C +G   +   L   MK+   + +  + S 
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 510

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
                   G I  +  + K+M+  G+     ++  +  G+C K+
Sbjct: 511 --------GDITLSAELIKKMLSCGYA--PSLLKDIKSGVCKKA 544


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 208/402 (51%), Gaps = 5/402 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF  + + G + +V  +N L+         E  + FF E    G  PN  T++ +I  YC
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYC 249

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA K++  M   G +PN+ ++ +++N LC+ G++KE  E+L++M +    P+  
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+N L+ G C VG   +A  +   +  +GL P+V TYT +++  CK G  N AME L++ 
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            +RG+ PN  T+ TL +G+ ++G   +   ++K M +    P  I+Y+ L+NG    G++
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  + +EM+  GF  D    ++++ G C ++ E    LE A+Q+  +M  K    D  
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFC-RNQE----LEKAFQLKVEMVAKGISPDVA 484

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I+ L K ++  E        + +G  P  +T+ ++I A C EG +DKAL L   M
Sbjct: 485 TYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEM 544

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +    P   +Y++LI   ++  ++ +A  L    L +  +P
Sbjct: 545 IQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVP 586



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 208/413 (50%), Gaps = 26/413 (6%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G N ++  +N ++  L    + +   +   E S     P+  TF+ +I  YCN  +F +A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             +   M  NG  PNV T+T L+NS+CK+G L  A+E LDQM   G  PN +TY  L+ G
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
               G +++AY+++  +  +G  P + TY A+++G C +GR  +A  LL E IERG  P+
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VV+++T+ +G+C+     K   L   M  +   PD  +YS+L+ GL K  ++     +F+
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM+  G   DE    SL+   C+    E D L+ A ++ ++M +K    D  TY ++I  
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCI----EGD-LDKALRLHDEMIQKGFSPDIVTYNVLING 562

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI---------------QALCGEGKIDKA 424
             K  +T EA   L   +    +P  IT+N +I               +  C +G +++A
Sbjct: 563 FNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEA 622

Query: 425 LLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYGAALKQGVIPQ 474
             +L  M +     +   Y+++I   +K+  +EK+Y+   LY   L  G  P 
Sbjct: 623 DRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYN---LYKEMLHSGFAPH 672



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 182/393 (46%), Gaps = 31/393 (7%)

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR- 170
           S Y    +S  F ++++     N   +A  +++     G+ P V ++  +++++ ++ + 
Sbjct: 124 SYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQS 183

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           +K A  +  +M   G  PN+ TYN L++G C  G +E        ++ +G  P+V TY  
Sbjct: 184 VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNT 243

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++D +CK+ +  EA +LL     +G+ PN++++N + NG C+EG   +   +L+ M KR 
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------- 341
            +PD+++++TL+NG    G    A+ +  EMV+ G   +     +L+  +C         
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363

Query: 342 ---------------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
                                +  + ++  L+ AYQ+ ++M +        TY  +I   
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
               + ++A   L   IE G IP  ++++ +I   C   +++KA  L   M      P  
Sbjct: 424 CILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDV 483

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +Y  LI  L +  +  + C L+   L  G+ P
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 173/359 (48%), Gaps = 25/359 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L   ++  D ++  G + +   +  L+         + A +   E    G  P   
Sbjct: 355 KAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTII 414

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C      +A  ++  M + G+ P+V +++ +++  C++  L++A ++  +M
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ TY+ L++GLC   R+ E  ++   + + GL PD  TYT++++ +C  G  
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A+ L +E I++G +P++VT+N L NG+ K+    +   LL  +     +P++I+Y+TL
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++              FK  +            +L++G CMK      L+ +A +V E M
Sbjct: 595 IDNCNNLE--------FKSAL------------ALMKGFCMKG-----LMNEADRVLESM 629

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            +K    +   Y ++I    K    ++A       +  G  P ++T   + ++L  EGK
Sbjct: 630 LQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 115/263 (43%), Gaps = 17/263 (6%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G +  V+ ++ L+  L            F E  S GL P+  T++ +I  YC + D  +A
Sbjct: 478 GISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKA 537

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN----- 194
            ++ D M   G+ P++ T+ +L+N   K  R KEA  +L ++      PN  TYN     
Sbjct: 538 LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN 597

Query: 195 ----------CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
                      L+KG C  G + EA  +L ++   G K +   Y  ++ G  KVG   +A
Sbjct: 598 CNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKA 657

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L  E +  G  P+ VT   L      EG  ++   LL    K +C   + + + +L G
Sbjct: 658 YNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLK-SCRITEAALAKVLIG 716

Query: 305 L-LKWGKIRPAVSIFKEMVRFGF 326
           +  K G +    ++ K+M   G 
Sbjct: 717 INSKEGNMDAVFNVLKDMALSGL 739



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 4/165 (2%)

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I  A+SI      +GF       N++L  +       K  ++ A  +F++M +     + 
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAV----IRTKQSVKIAEGIFKEMVESGVSPNV 203

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY I+IR        +  L         G +P  +T+N +I A C   KI +A  LL L
Sbjct: 204 YTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRL 263

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           M      P+  SY+++I  L +  +  +   +     K+  +P R
Sbjct: 264 MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 210/412 (50%), Gaps = 7/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KAS  ++ + + D ++  G    +  +N L+ A+    + + A+   S+  S+G  P++ 
Sbjct: 209 KASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAV 268

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +++  C    + E  ++   M  N   P+  TF  +V SLC+ G +  A++V+D M
Sbjct: 269 TYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHM 328

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P+I TY+ +L GLC VGRV++A E+L  +K+ G KPD   YT V+ G C + + 
Sbjct: 329 SEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQW 388

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A EL+ E +     P+ VTFNT+    C++G   + + +++ M +  C PD ++Y+++
Sbjct: 389 EHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSI 448

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL     I  A+ +   +  +G + D    N+LL+GLC       D  EDA Q+   M
Sbjct: 449 IDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLC-----SVDRWEDAEQLMVNM 503

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  D  T+  VI +L +     +A+  L    E G IP   T+N V+ AL   GK 
Sbjct: 504 MHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKT 563

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +AL LL  M      P   +Y+ +I+ + +  K  +A  L    +  G+ P
Sbjct: 564 QEALKLLSGMTNGT--PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSP 613



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 195/381 (51%), Gaps = 10/381 (2%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G + +V  +N ++         E A +  S        P+++TF+ +IR  C +    +A
Sbjct: 125 GASATVVTYNTMVNGYCRAGRIEDARRLIS---GMPFPPDTFTFNPLIRALCVRGRVPDA 181

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             V D M   G  P+V T++IL+++ CK+   ++A+ +LD+M   GC+P+I TYN L+  
Sbjct: 182 LAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINA 241

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           +C  G V+EA  +L ++ + G KPD  TYT V+   C   R  E  EL  E       P+
Sbjct: 242 MCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPD 301

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VTFNT+    C++G   + + ++  M +  C+PD ++YS++L+GL   G++  AV +  
Sbjct: 302 EVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLS 361

Query: 320 EMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
            +  +G + D     ++L+GLC ++ WE       A ++  +M       D  T+  VI 
Sbjct: 362 RLKSYGCKPDTIAYTTVLKGLCSIEQWEH------AEELMAEMVCSDCPPDEVTFNTVIA 415

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
           +L +    D A+  +    E G  P  +T+N++I  LC E  ID A+ LL  +  +   P
Sbjct: 416 SLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKP 475

Query: 439 SRTSYDMLITKLDQLEKSYDA 459
              +++ L+  L  +++  DA
Sbjct: 476 DIVTFNTLLKGLCSVDRWEDA 496



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 204/394 (51%), Gaps = 5/394 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + +FD +   G + SV  ++ LL A    +    A+    E  + G  P+  T+++
Sbjct: 178 VPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNV 237

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   CN+ D  EA  ++  +  +G  P+  T+T ++ SLC S R KE  E+  +M    
Sbjct: 238 LINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNK 297

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P+  T+N ++  LC  G V+ A +++ ++   G  PD+ TY++++DG C VGR ++A+
Sbjct: 298 CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAV 357

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL+     G  P+ + + T+  G C          L+  M   +C PD+++++T++  L
Sbjct: 358 ELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASL 417

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G +  A+ + ++M   G   D    NS++ GLC      +  ++DA ++   +    
Sbjct: 418 CQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLC-----NERCIDDAMELLSNLQSYG 472

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  T+  +++ L    + ++A   + + +     P   TFN VI +LC +G + +A+
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAI 532

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
             L +M E+  IP++++Y++++  L +  K+ +A
Sbjct: 533 ETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEA 566



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 195/400 (48%), Gaps = 15/400 (3%)

Query: 51  SLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE 110
           SL  Q  VDR         I + D + + G    +  ++ +L  L  +   + AV+  S 
Sbjct: 311 SLCQQGLVDR--------AIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSR 362

Query: 111 ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR 170
             SYG  P++  ++ +++  C+   +  A +++  M  +   P+  TF  ++ SLC+ G 
Sbjct: 363 LKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGL 422

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           +  A++V++QM   GC P+I TYN ++ GLC    +++A E+L N+++ G KPD+ T+  
Sbjct: 423 VDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNT 482

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++ G C V R  +A +L+   +     P+  TFNT+    C++G  ++ +  LK+M +  
Sbjct: 483 LLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENG 542

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C+P++ +Y+ +++ LLK GK + A+ +   M       D    N+++  +      +   
Sbjct: 543 CIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNI-----TKAGK 595

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           +E+A  +   M       D  TY  +   + +   TD A+  L    +MG  P    +N+
Sbjct: 596 MEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYND 655

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++   C   + D A+     M     +P  ++Y +L+  L
Sbjct: 656 ILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL 695



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 151/302 (50%), Gaps = 13/302 (4%)

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
           V    IL+  LC  GR+ +A  V      +G    + TYN ++ G C  GR+E+A  ++ 
Sbjct: 98  VVPCNILIKRLCSGGRVADAERVF---ATLGASATVVTYNTMVNGYCRAGRIEDARRLIS 154

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +      PD +T+  ++   C  GR  +A+ + ++ + RG +P+VVT++ L +  CK  
Sbjct: 155 GMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKAS 211

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              + + LL  M+ + C PD ++Y+ L+N +   G +  A++I  ++   G + D     
Sbjct: 212 GYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYT 271

Query: 335 SLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            +L+ LC  + W+E +      ++F +M       D  T+  ++ +L +    D A+  +
Sbjct: 272 PVLKSLCGSERWKEVE------ELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVV 325

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
            H  E G IP  +T+++++  LC  G++D A+ LL  +  +   P   +Y  ++  L  +
Sbjct: 326 DHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSI 385

Query: 454 EK 455
           E+
Sbjct: 386 EQ 387



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 151/308 (49%), Gaps = 15/308 (4%)

Query: 51  SLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE 110
           SL  +  VDR         I + + + ++G N  +  +N ++  L      + A++  S 
Sbjct: 416 SLCQKGLVDR--------AIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSN 467

Query: 111 ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR 170
             SYG  P+  TF+ +++  C+ + + +A +++  M  +   P+ TTF  ++ SLC+ G 
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           L +A+E L  M   GC PN  TYN ++  L   G+ +EA ++L  + N    PD+ TY  
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNT 585

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           V+    K G+  EA++LL   +  G++P+ +T+ +L  G C+E    + + +L  ++   
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             PD   Y+ +L G  +  +   A+  F  MV  G   DE     LL  L  +      L
Sbjct: 646 LSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYEC-----L 700

Query: 351 LEDAYQVF 358
           L++A Q+ 
Sbjct: 701 LDEAKQLL 708



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 2/191 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + I+    + ++G   + S +N ++ AL+   + + A+K  S  ++    P+  T++ 
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNT 585

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I          EA  ++  M  NG  P+  T+  L   +C+      A+ +L ++  +G
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+   YN +L G C   R + A +   ++ + G  PD  TY  +++        +EA 
Sbjct: 646 LSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAK 705

Query: 246 ELLNEAIERGV 256
           +LL      GV
Sbjct: 706 QLLVNLCSLGV 716


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 211/409 (51%), Gaps = 6/409 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVS-DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           L++ + +FD + ++GT    S  ++ L+  L  +   E A     +    G  P++ T++
Sbjct: 246 LRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           ++I+  C++    +A  + D M   G  PNV T+T+L++ LC+ G+++EA  V  +M + 
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  P++ TYN L+ G C  GRV  A+E+L  ++    KP+V T+  +M+G C+VG+  +A
Sbjct: 366 GIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           + LL   ++ G++P++V++N L +G C+EG       LL  M   +  PD ++++ ++N 
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINA 485

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             K GK   A +    M+R G  +DE    +L+ G+C           DA  + E + K 
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKT-----RDALFILETLVKM 540

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             +T P +  +++  L KG K  E L  L    ++G +P  +T+  ++  L   G I  +
Sbjct: 541 RMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGS 600

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +L LM     +P+   Y ++I  L Q  +  +A  L  A    GV P
Sbjct: 601 FRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSP 649



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 176/400 (44%), Gaps = 76/400 (19%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSG-----------------------------------R 170
           M  +G+   +  +  +VN+LCK+G                                    
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLN 245

Query: 171 LKEALEVLDQMGRIG-CKPNIQTYNCLLKGLCYVGRVEEA------------------YE 211
           L++AL+V D M R G C PN  +Y+ L+ GLC VGR+EEA                  Y 
Sbjct: 246 LRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305

Query: 212 MLMNVKND-----------------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
           +L+    D                 G KP+V+TYT ++DG C+ G+  EA  +  + ++ 
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           G+ P+V+T+N L NGYCK+G  +    LL +M+KR C P+  +++ L+ GL + GK   A
Sbjct: 366 GIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           V + K M+  G   D    N L+ GLC +       +  AY++   M       D  T+ 
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGH-----MNVAYKLLTSMNSFDLEPDCLTFT 480

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            +I    K  K D A   L   +  G     +T   +I  +C  GK   AL +L  + + 
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKM 540

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             + +  S ++++  L +  K  +  A+ G   K G++P 
Sbjct: 541 RMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPS 580



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 192/416 (46%), Gaps = 18/416 (4%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +   +  +G +  +  +N L+  L        A K  +  +S+ L P+  TF+ +I  
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINA 485

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C +     A   +  M   G   +  T T L++ +C  G+ ++AL +L+ + ++     
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTT 545

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             + N +L  L    +++E   ML  +   GL P V TYT ++DG  + G  + +  +L 
Sbjct: 546 PHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLE 605

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
                G  PNV  +  + NG C+ G   +   LL  M+     P+ ++Y+ ++ G +  G
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRG--LCMKSWEEKD--LLEDAYQVFEKMTKKV 365
           K+  A+   + MV  G+E+++R+ +SLLRG  L  K   E D   +++   V E++    
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGST 725

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG-HIPRTITFNNVIQALCGEGKIDKA 424
           S    G    ++  L K  +TDE+   +   ++ G  + + I    ++++ C + K  K 
Sbjct: 726 S----GLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKAIDI--IMESYCSKKKHTKC 779

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY-------GAALKQGVIP 473
           + L+ L+ +   +PS  S+ ++I  L +   +  A  L        G   K GV+P
Sbjct: 780 VELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLP 835



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 145/312 (46%), Gaps = 8/312 (2%)

Query: 164 SLCKSGRLKEALEVLDQMGRI-GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
           S C+   LK  +   D++  + G + N   Y+ LL  L  +     AY     ++ DG  
Sbjct: 134 SRCEKEMLK-LISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFV 192

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
             +  Y  +++  CK G +  A   + + ++ G   +     +L  G+C+       + +
Sbjct: 193 VGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKV 252

Query: 283 LKLMKKR-NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
             LM +   C P+ +SYS L++GL + G++  A  +  +M   G +   R    L++ LC
Sbjct: 253 FDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC 312

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                ++ L++ A+ +F++M  +    +  TY ++I  L +  K +EA       ++ G 
Sbjct: 313 -----DRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGI 367

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P  IT+N +I   C +G++  A  LL +M + A  P+  +++ L+  L ++ K Y A  
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427

Query: 462 LYGAALKQGVIP 473
           L    L  G+ P
Sbjct: 428 LLKRMLDNGLSP 439



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 9/292 (3%)

Query: 37  LSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMAL 95
           L T   + +   P SL     +D + K   LKE + +   I K G   SV  +  L+  L
Sbjct: 534 LETLVKMRMLTTPHSLNV--ILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGL 591

Query: 96  VMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV 155
           +   +   + +        G  PN + ++I+I   C      EA K++  M D+G  PN 
Sbjct: 592 IRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG--LCYVGRVE---EAY 210
            T+T++V     +G+L  ALE +  M   G + N + Y+ LL+G  L   G  E   E  
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECI 711

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           + L++V              ++   CK GR++E+  L+   ++ GV       + +   Y
Sbjct: 712 KELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLE-KAIDIIMESY 770

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           C +    K V L+ L+ K   +P   S+  ++ GL K G    A  +  E++
Sbjct: 771 CSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELL 822


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 205/391 (52%), Gaps = 5/391 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           + +FN ++ +LV +    TA+  F +    G+ P+ +T +I+I C+C+      +  V+ 
Sbjct: 10  IMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLG 69

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY PN  T   L+  LC  G +K++L   D++   G + +  +Y  LL GLC +G
Sbjct: 70  KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A ++L  +++   +P+V  Y  ++DG CK    NEA +L +E   RG+ PNV+T++
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYS 189

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL  G+C  G  M+  GLL  M  +N  P+  +Y+ L++ L K GK++ A ++   M + 
Sbjct: 190 TLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKE 249

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G + +    N+L+ G C+        +++A Q+F  M +K    +  +Y I+I  L K K
Sbjct: 250 GVKPNVVSYNTLMDGYCLIGE-----VQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSK 304

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + DEA+  L   +    +P T+T++++I   C  G+I  AL LL  MY   +     +Y 
Sbjct: 305 RVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYT 364

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            L+  L + +    A AL+    ++G+ P +
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPNK 395



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 195/370 (52%), Gaps = 5/370 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    +  + +   I+   T  +V  +N ++  L        A   +SE  + G+ PN  
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  +C      EA  +++ M     +PNV T+TIL+++LCK G++KEA  +L  M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G KPN+ +YN L+ G C +G V+ A +M   +   G+ P+VY+Y  ++D  CK  R 
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EAM LL E + + + PN VT+++L +G+CK G     + LLK M  R    D ++Y++L
Sbjct: 307 DEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSL 366

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+ L K   +  A ++F +M   G + ++    +L+ GLC K    K    +A ++F+ +
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLC-KGGRHK----NAQKLFQHL 421

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K    +  TY ++I  L K    DEAL       E G IP  +TF  +I++L  + + 
Sbjct: 422 LVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQN 481

Query: 422 DKALLLLFLM 431
           DKA  LL  M
Sbjct: 482 DKAEKLLHEM 491



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 195/394 (49%), Gaps = 8/394 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +   D +   G       +  LL  L  + E  +A+K           PN   ++ 
Sbjct: 96  VKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNT 155

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G  PNV T++ L+   C +G+L EA  +L++M    
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKN 215

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ TY  L+  LC  G+V+EA  +L  +  +G+KP+V +Y  +MDG+C +G    A 
Sbjct: 216 INPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAK 275

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +  +++GV PNV ++N + +  CK     + + LL+ +  +N +P+ ++YS+L++G 
Sbjct: 276 QMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGF 335

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I  A+ + KEM   G   D     SLL  LC     +   L+ A  +F KM ++ 
Sbjct: 336 CKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALC-----KNQNLDKATALFMKMKERG 390

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY  +I  L KG +   A     H +  G      T+N +I  LC EG +D+AL
Sbjct: 391 IQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEAL 450

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL---DQLEKS 456
            +   M E+  IP   +++++I  L   DQ +K+
Sbjct: 451 AMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKA 484



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 141/276 (51%), Gaps = 1/276 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        +D + K   +KE  ++   + K+G   +V  +N L+    ++ E + A +
Sbjct: 217 NPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQ 276

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F      G+ PN ++++IMI   C      EA  ++  +      PN  T++ L++  C
Sbjct: 277 MFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFC 336

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K GR+  AL++L +M   G   ++ TY  LL  LC    +++A  + M +K  G++P+ Y
Sbjct: 337 KLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKY 396

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYTA++DG CK GR   A +L    + +G   NV T+N + +G CKEG   + + +   M
Sbjct: 397 TYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKM 456

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           ++  C+PD +++  ++  L +  +   A  +  EM+
Sbjct: 457 EENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMI 492



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 110/221 (49%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F ++ + G N +V  +N ++  L      + A+    E     + PN+ T+S +I  +C
Sbjct: 277 MFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFC 336

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A  ++  M+  G   +V T+T L+++LCK+  L +A  +  +M   G +PN  
Sbjct: 337 KLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKY 396

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+ GLC  GR + A ++  ++   G + +V+TY  ++ G CK G  +EA+ + ++ 
Sbjct: 397 TYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKM 456

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
            E G  P+ VTF  +     ++    K   LL  M  ++ L
Sbjct: 457 EENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 193/386 (50%), Gaps = 9/386 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++ +L    +  +A+++ S     G  P+++TF+ +I  YC  N    AR + D M 
Sbjct: 14  YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G+  +V ++  L+   C++GR+ EA+E+  +M     +P++  Y  L+KGLC  GR E
Sbjct: 74  LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRGE 129

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           E   ML  +K  G +P    Y AV+D  C   ++ EA E+L E  E+G+ P VVT   + 
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 189

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           N YCKEG     + +L+LMK R C P+  +Y+ L+ G    GK+  A+++  +M   G  
Sbjct: 190 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVN 249

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    N L+RG C+        +E A+++   M     + D  TY  +I  L K  +TD
Sbjct: 250 PDAVTYNLLIRGQCIDGH-----IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 304

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A          G  P  +TFN++I  LC  GK+D A   L  M      P   +Y   I
Sbjct: 305 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFI 364

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L +++ S +  +  G  L++ V P
Sbjct: 365 EHLCKMKGSQEGLSFIGEMLQKDVKP 390



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 175/376 (46%), Gaps = 21/376 (5%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A +   E    GLAP   T + +I  YC +    +A +V++ M   G  PNV T+  LV 
Sbjct: 166 AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQ 225

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             C  G++ +A+ +L++M   G  P+  TYN L++G C  G +E A+ +L  ++ DGL  
Sbjct: 226 GFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA 285

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D YTY A+++  CK GR+++A  L +    RG+ PN VTFN+L NG CK G        L
Sbjct: 286 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFL 345

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE--------VDERMMNS 335
           + M    C PD  +YS+ +  L K    +  +S   EM++   +        V  +++  
Sbjct: 346 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 405

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
              GL  ++W E             M       D  TY   +R      + +EA   L  
Sbjct: 406 RNYGLVARTWGE-------------MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 452

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
             + G    T+ +N ++      G+ D A+ +L  M   A +P++ +Y +L+  L ++  
Sbjct: 453 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRL 512

Query: 456 SYDACALYGAALKQGV 471
             D   L  A + + +
Sbjct: 513 VEDVLPLTPAGVWKAI 528



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 173/361 (47%), Gaps = 7/361 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+  L      E  +         G  P++  ++ ++   C +    EA +++  MF
Sbjct: 115 YAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMF 174

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  P V T T ++N+ CK GR+ +AL VL+ M   GCKPN+ TYN L++G C  G+V 
Sbjct: 175 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 234

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +L  ++  G+ PD  TY  ++ G C  G    A  LL      G+  +  T+N L 
Sbjct: 235 KAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 294

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           N  CK+G   +   L   ++ R   P+ +++++L+NGL K GK+  A    ++MV  G  
Sbjct: 295 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCT 354

Query: 328 VDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
            D    +S +  LC MK  +E   L    ++ +K  K  +V     Y IVI  L K +  
Sbjct: 355 PDTYTYSSFIEHLCKMKGSQEG--LSFIGEMLQKDVKPSTV----NYTIVIHKLLKERNY 408

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
                     +  G  P  +T+   ++A C EG++++A  +L  M ++       +Y+ L
Sbjct: 409 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL 468

Query: 447 I 447
           +
Sbjct: 469 M 469



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 208/434 (47%), Gaps = 30/434 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + + + +K  G   +V  +N L+       +   A+   ++    G+ P++ 
Sbjct: 194 KEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAV 253

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++IR  C       A +++  M  +G   +  T+  L+N+LCK GR  +A  + D +
Sbjct: 254 TYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSL 313

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KPN  T+N L+ GLC  G+V+ A++ L  + + G  PD YTY++ ++  CK+  S
Sbjct: 314 ETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 373

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL----MKKRNCLPDKIS 297
            E +  + E +++ V P+ V +  + +   KE    +  GL+      M    C PD ++
Sbjct: 374 QEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE----RNYGLVARTWGEMVSSGCNPDVVT 429

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+T +      G++  A ++  EM + G  VD    N+L+ G    S  + D    A  +
Sbjct: 430 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG--HASIGQTD---HAVSI 484

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL----IHLHHAIEMGHI----------- 402
            ++MT   SV +  TY I++R L + +  ++ L      +  AIE+  +           
Sbjct: 485 LKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNE 544

Query: 403 --PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
             P + T++++++    +G+ ++A  L+ LM E +   +   Y  L+T   + ++  DA 
Sbjct: 545 FLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAW 604

Query: 461 ALYGAALKQGVIPQ 474
            L  + ++ G IP 
Sbjct: 605 VLVCSMIQHGFIPH 618



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 164/348 (47%), Gaps = 9/348 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+FD +   G    V  +  L+         + AV+ F E       P+   ++ +++  
Sbjct: 67  DLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGL 122

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      E   ++  M + G+ P+   +  +V+  C   + KEA E+L +M   G  P +
Sbjct: 123 CKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCV 182

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            T   ++   C  GR+ +A  +L  +K  G KP+V+TY A++ GFC  G+ ++AM LLN+
Sbjct: 183 VTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNK 242

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               GV P+ VT+N L  G C +G       LL+LM+    + D+ +Y+ L+N L K G+
Sbjct: 243 MRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGR 302

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
              A S+F  +   G + +    NSL+ GLC     +   ++ A++  EKM       D 
Sbjct: 303 TDQACSLFDSLETRGIKPNAVTFNSLINGLC-----KSGKVDIAWKFLEKMVSAGCTPDT 357

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            TY   I  L K K + E L  +   ++    P T+ +  VI  L  E
Sbjct: 358 YTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 405



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 164/391 (41%), Gaps = 12/391 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + + ++  G N     +N L+    +    E+A +        GL  + +T++ +I   C
Sbjct: 239 LLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 298

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A  + D +   G  PN  TF  L+N LCKSG++  A + L++M   GC P+  
Sbjct: 299 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTY 358

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY+  ++ LC +   +E    +  +    +KP    YT V+    K            E 
Sbjct: 359 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 418

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  G  P+VVT+ T    YC EG   +   +L  M K     D ++Y+TL++G    G+ 
Sbjct: 419 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 478

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL------------LEDAYQVFE 359
             AVSI K+M       ++     LLR L      E  L            L D + +F+
Sbjct: 479 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 538

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            M K   + + GTY  ++    +  +T+EA   +    E         +  ++   C   
Sbjct: 539 VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 598

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +   A +L+  M +H  IP   SY  L++ L
Sbjct: 599 RYLDAWVLVCSMIQHGFIPHLMSYQHLLSGL 629



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 154/317 (48%), Gaps = 9/317 (2%)

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           T+  ++ SLC+   L  AL  L  M R G +P+  T+N L+ G C   +V+ A ++   +
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
              G   DV +Y A+++GFC+ GR +EA+EL  E  +    P++  +  L  G CK G  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            +G+ +L+ MK+    P   +Y+ +++      K + A  + +EM   G         ++
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +   C     ++  + DA +V E M  +    +  TY  +++      K  +A+  L+  
Sbjct: 189 INAYC-----KEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKM 243

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
              G  P  +T+N +I+  C +G I+ A  LL LM     I  + +Y+ LI  L +  ++
Sbjct: 244 RVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 303

Query: 457 YDACALYGAALKQGVIP 473
             AC+L+ +   +G+ P
Sbjct: 304 DQACSLFDSLETRGIKP 320



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 122/278 (43%), Gaps = 19/278 (6%)

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           + + E  S G  P+  T++  +R YC +    EA  V+  M  NG   +   +  L++  
Sbjct: 413 RTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGH 472

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM------------- 212
              G+   A+ +L QM  +   PN  TY  LL+ L  +  VE+   +             
Sbjct: 473 ASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTD 532

Query: 213 ---LMNV-KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
              L +V K +   P+  TY+++++GF + GR+ EA  L++   E  ++ N   +  L  
Sbjct: 533 VFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVT 592

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
            +CK    +    L+  M +   +P  +SY  LL+GL+  G+   A  IF       +  
Sbjct: 593 CFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSP 652

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           DE +   ++ GL  K     D+  +   + E+M  + S
Sbjct: 653 DEIVWKVIIDGLIKKG--HSDISREMIIMLERMNCRPS 688



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 22/257 (8%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++   + K+G       +N L+     + + + AV    + +S    PN +T+ I
Sbjct: 443 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 502

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++R           R V D               +    + K+  L +   + D M +  
Sbjct: 503 LLR------HLVRMRLVED------------VLPLTPAGVWKAIELTDVFGLFDVMKKNE 544

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TY+ +L+G    GR EEA  ++  +K D +  +   YTA++  FCK  R  +A 
Sbjct: 545 FLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAW 604

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L+   I+ G  P+++++  L +G   EG   K   +    + ++  PD+I +  +++GL
Sbjct: 605 VLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 664

Query: 306 LKWGKIRPAVSIFKEMV 322
           +K G       I +EM+
Sbjct: 665 IKKGH----SDISREMI 677



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/172 (18%), Positives = 75/172 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L +   +FD +KK+    +   ++ +L         E A    S      ++ N  
Sbjct: 526 KAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNED 585

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ ++ C+C    + +A  ++  M  +G+ P++ ++  L++ L   G+  +A E+    
Sbjct: 586 IYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNS 645

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
                 P+   +  ++ GL   G  + + EM++ ++    +P   TY  + +
Sbjct: 646 RWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 697


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 208/402 (51%), Gaps = 5/402 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF  + + G + +V  +N L+         E  + FF E    G  PN  T++ +I  YC
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYC 249

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA K++  M   G +PN+ ++ +++N LC+ G++KE  E+L++M +    P+  
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+N L+ G C VG   +A  +   +  +GL P+V TYT +++  CK G  N AME L++ 
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            +RG+ PN  T+ TL +G+ ++G   +   ++K M +    P  I+Y+ L+NG    G++
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  + +EM+  GF  D    ++++ G C ++ E    LE A+Q+  +M  K    D  
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFC-RNQE----LEKAFQLKVEMVAKGISPDVA 484

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I+ L K ++  E        + +G  P  +T+ ++I A C EG +DKAL L   M
Sbjct: 485 TYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEM 544

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +    P   +Y++LI   ++  ++ +A  L    L +  +P
Sbjct: 545 IQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVP 586



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 208/413 (50%), Gaps = 26/413 (6%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G N ++  +N ++  L    + +   +   E S     P+  TF+ +I  YCN  +F +A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             +   M  NG  PNV T+T L+NS+CK+G L  A+E LDQM   G  PN +TY  L+ G
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
               G +++AY+++  +  +G  P + TY A+++G C +GR  +A  LL E IERG  P+
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VV+++T+ +G+C+     K   L   M  +   PD  +YS+L+ GL K  ++     +F+
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM+  G   DE    SL+   C+    E D L+ A ++ ++M +K    D  TY ++I  
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCI----EGD-LDKALRLHDEMIQKGFSPDIVTYNVLING 562

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI---------------QALCGEGKIDKA 424
             K  +T EA   L   +    +P  IT+N +I               +  C +G +++A
Sbjct: 563 FNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEA 622

Query: 425 LLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYGAALKQGVIPQ 474
             +L  M +     +   Y+++I   +K+  +EK+Y+   LY   L  G  P 
Sbjct: 623 DRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYN---LYKEMLHSGFAPH 672



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 182/393 (46%), Gaps = 31/393 (7%)

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR- 170
           S Y    +S  F ++++     N   +A  +++     G+ P V ++  +++++ ++ + 
Sbjct: 124 SYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQS 183

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           +K A  +  +M   G  PN+ TYN L++G C  G +E        ++ +G  P+V TY  
Sbjct: 184 VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNT 243

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++D +CK+ +  EA +LL     +G+ PN++++N + NG C+EG   +   +L+ M KR 
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------- 341
            +PD+++++TL+NG    G    A+ +  EMV+ G   +     +L+  +C         
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363

Query: 342 ---------------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
                                +  + ++  L+ AYQ+ ++M +        TY  +I   
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
               + ++A   L   IE G IP  ++++ +I   C   +++KA  L   M      P  
Sbjct: 424 CILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDV 483

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +Y  LI  L +  +  + C L+   L  G+ P
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 173/359 (48%), Gaps = 25/359 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L   ++  D ++  G + +   +  L+         + A +   E    G  P   
Sbjct: 355 KAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTII 414

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C      +A  ++  M + G+ P+V +++ +++  C++  L++A ++  +M
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ TY+ L++GLC   R+ E  ++   + + GL PD  TYT++++ +C  G  
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A+ L +E I++G +P++VT+N L NG+ K+    +   LL  +     +P++I+Y+TL
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++              FK  +            +L++G CMK      L+ +A +V E M
Sbjct: 595 IDNCNNLE--------FKSAL------------ALMKGFCMKG-----LMNEADRVLESM 629

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            +K    +   Y ++I    K    ++A       +  G  P ++T   + ++L  EGK
Sbjct: 630 LQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 115/263 (43%), Gaps = 17/263 (6%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G +  V+ ++ L+  L            F E  S GL P+  T++ +I  YC + D  +A
Sbjct: 478 GISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKA 537

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN----- 194
            ++ D M   G+ P++ T+ +L+N   K  R KEA  +L ++      PN  TYN     
Sbjct: 538 LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN 597

Query: 195 ----------CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
                      L+KG C  G + EA  +L ++   G K +   Y  ++ G  KVG   +A
Sbjct: 598 CNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKA 657

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L  E +  G  P+ VT   L      EG  ++   LL    K +C   + + + +L G
Sbjct: 658 YNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLK-SCRITEAALAKVLIG 716

Query: 305 L-LKWGKIRPAVSIFKEMVRFGF 326
           +  K G +    ++ K+M   G 
Sbjct: 717 INSKEGNMDAVFNVLKDMALSGL 739



 Score = 44.7 bits (104), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 4/165 (2%)

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I  A+SI      +GF       N++L  +       K  ++ A  +F++M +     + 
Sbjct: 148 INKALSIVNLAKSYGFMPGVLSYNAILDAV----IRTKQSVKIAEGIFKEMVESGVSPNV 203

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY I+IR        +  L         G +P  +T+N +I A C   KI +A  LL L
Sbjct: 204 YTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRL 263

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           M      P+  SY+++I  L +  +  +   +     K+  +P R
Sbjct: 264 MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 213/414 (51%), Gaps = 5/414 (1%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           R++   L + I++F  + K     S+ DFN LL A+V + + +  +    +    G+  +
Sbjct: 60  RLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRND 119

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            +TF+I+I C+C       A  V+  M   GY P+  T   LVN  C+  R+ +A+ ++D
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M  IG +P+I  YN ++  LC   RV +A +    +   G++P+V TYTA+++G C  G
Sbjct: 180 KMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSG 239

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R N+A  LL + I+R +TPNV+T++ L + + K G  ++   + + M + +  PD ++YS
Sbjct: 240 RWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYS 299

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           +L+NGL    +I  A  +F  MV  G   D    N+L+ G C     +   +ED  ++F 
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFC-----KAKRVEDGMKLFR 354

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           KM+++  V +  TY  +I+   +    D+A          G  P   T+N ++  LC  G
Sbjct: 355 KMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNG 414

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++KAL++   M +        +Y  +I  + +  K  DA  L+ +   +G+ P
Sbjct: 415 LLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKP 468



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 140/287 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + +D F  I + G   +V  +  L+  L        A +   +     + PN  
Sbjct: 202 KTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVI 261

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S ++  +       EA+++ + M      P++ T++ L+N LC   R+ EA ++ D M
Sbjct: 262 TYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P++ +YN L+ G C   RVE+  ++   +   GL  +  TY  ++ GF +VG  
Sbjct: 322 VSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDV 381

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A E  ++    GV+P++ T+N L  G C  G   K + + + M+K     D ++Y+T+
Sbjct: 382 DKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTV 441

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           + G+ K GK+  A  +F  +   G + D     +++ GLC K  + +
Sbjct: 442 IQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHE 488



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 133/260 (51%), Gaps = 1/260 (0%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D IK+  T  +V  ++ LL A V   +   A + F E     + P+  T+S +I   C  
Sbjct: 250 DMIKRKITP-NVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
           +   EA ++ D M   G  P+V ++  L+N  CK+ R+++ +++  +M + G   N  TY
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L++G   VG V++A E    + + G+ PD++TY  ++ G C  G   +A+ +  +  +
Sbjct: 369 NTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQK 428

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
             +  ++VT+ T+  G CK G      GL   +  +   PD ++Y+T+++GL   G    
Sbjct: 429 SEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHE 488

Query: 314 AVSIFKEMVRFGFEVDERMM 333
             +++ +M + G   ++ M+
Sbjct: 489 VEALYTKMKQEGLMKNDSML 508



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 9/233 (3%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   + E  +IF+ + +   +  +  ++ L+  L + +  + A + F    S G  P+ 
Sbjct: 271 VKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDV 330

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++ +I  +C      +  K+   M   G   N  T+  L+    + G + +A E   Q
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQ 390

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P+I TYN LL GLC  G +E+A  +  +++   +  D+ TYT V+ G CK G+
Sbjct: 391 MDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGK 450

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG---------TPMKGVGLLK 284
             +A  L      +G+ P++VT+ T+ +G C +G         T MK  GL+K
Sbjct: 451 VEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMK 503



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 4/198 (2%)

Query: 66  LKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           L +RID    +FD +   G    V  +N L+         E  +K F + S  GL  N+ 
Sbjct: 307 LHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTV 366

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+ +    D  +A++    M   G  P++ T+ IL+  LC +G L++AL + + M
Sbjct: 367 TYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDM 426

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +     +I TY  +++G+C  G+VE+A+ +  ++   GLKPD+ TYT +M G C  G  
Sbjct: 427 QKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQ 486

Query: 242 NEAMELLNEAIERGVTPN 259
           +E   L  +  + G+  N
Sbjct: 487 HEVEALYTKMKQEGLMKN 504


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 224/469 (47%), Gaps = 21/469 (4%)

Query: 20  HNKIPQFNKLVVFAAASLSTAES-------LDLKENPRSLQAQRFV--DRIKASPLKERI 70
           H+     N LV    A+++T            ++ + RS+     V     +A      +
Sbjct: 6   HHHTAAANLLVPITTATINTQRVNLCPLKFFFVRSSSRSVADYNIVLQSLCRAGETARAL 65

Query: 71  DIF-DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +IF   + +DG   ++  +N ++  L   NE    ++ F E    G  P+  T++ +I  
Sbjct: 66  EIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDS 125

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK-- 187
            C   D  EAR++   M   G  PNV T+++L+N LCK GR+ EA E++ +M R  C   
Sbjct: 126 LCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 185

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK--PDVYTYTAVMDGFCKVGRSNEAM 245
           PNI TYN  L GLC      EA E++ ++++  L+  PD  T++ ++DG CK G+++EA 
Sbjct: 186 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEAC 245

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
              ++ I  G  PNVVT+N L NG CK     +   +++ M  +   PD I+YS L++  
Sbjct: 246 N--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 303

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++  A+ +   M   G   +    NS++ GLC KS    +  + A QV+ +M    
Sbjct: 304 CKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC-KSDRSGEAFQIALQVYNRML--- 359

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            V D  T+ I+I    K    ++A       +     P  +TF  +I  LC  G+++ A 
Sbjct: 360 -VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAAR 418

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            +L LM      P+  +Y++L+  L +  +  + C      +  G +P+
Sbjct: 419 DILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPE 467



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 192/398 (48%), Gaps = 12/398 (3%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETA 104
           P  +    F+D + K S   E  ++  S++ DG+     D   F+ L+  L    + + A
Sbjct: 186 PNIITYNSFLDGLCKQSMTAEACELMRSLR-DGSLRVSPDTVTFSTLIDGLCKCGQTDEA 244

Query: 105 VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
                +  + G  PN  T++ ++   C  +    A  +I+ M D G  P+V T+++LV++
Sbjct: 245 CN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDA 302

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
            CK+ R+ EALE+L  M   GC PN+ T+N ++ GLC   R  EA+++ + V N  L PD
Sbjct: 303 FCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPD 362

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
             T+  ++ G CK G   +A  L  E + + + P+V+TF  L +G CK G       +L 
Sbjct: 363 KVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILD 422

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           LM      P+ ++Y+ L++GL K G+I       +EMV  G   +     SL+  LC  S
Sbjct: 423 LMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRAS 482

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
                  +DA Q+  K+       D  TY I++  L K  KT++A+  L   +  GH P 
Sbjct: 483 RT-----DDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 537

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
           + TF      L   G +   + LL ++     +P  T+
Sbjct: 538 SFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATT 575



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 113/216 (52%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+         E A   F E  +  + P+  TF  +I   C       AR ++D M 
Sbjct: 366 FNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMG 425

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  PNV T+ +LV+ LCKSGR++E  E L++M   GC P   TY  L+  LC   R +
Sbjct: 426 NLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTD 485

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A +++  +K+ G  PD  TY  ++DG  K G++ +A+ +L E + +G  P+  TF   F
Sbjct: 486 DALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACF 545

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
            G  + G     + LL+++  +  LPD  + S++L+
Sbjct: 546 GGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 203/421 (48%), Gaps = 30/421 (7%)

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
           +++  F+ LL+ L   +        + E  + G+ PN +TF+ MI+  CNK    EA  +
Sbjct: 165 YTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELI 224

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           +  +F  G  P+  T+T L+   CK+G L  A E+ D+M + GC PN  TY+ L+ GLC 
Sbjct: 225 MGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCS 284

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            GR+EEA +ML  + + G++P V+ YT  +   C  GRS EA++LL +  +RG  PNV T
Sbjct: 285 EGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQT 344

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           +  L +G  ++G     +G+   M     +P  ++YS L+N L   G+   A++IF+ M+
Sbjct: 345 YTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWML 404

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEK------------------------------DLLE 352
                 +    N +++G C   + +K                                + 
Sbjct: 405 SHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMN 464

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +A ++ E M       D  TY  +I    +G K + A    +  +E G  P  +T+N +I
Sbjct: 465 NAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAII 524

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
                  K+D AL L + M E   +PS  +Y+M+I+   +  +  +A    G  +KQG++
Sbjct: 525 NGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLL 584

Query: 473 P 473
           P
Sbjct: 585 P 585



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 186/393 (47%), Gaps = 40/393 (10%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A + F      G  PNS T+S +I   C++    EA  +++ M D G  P V  +TI 
Sbjct: 254 DLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIP 313

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + SLC +GR  EA+++L +M + GC PN+QTY  L+ GL   G+ E A  +   +  DGL
Sbjct: 314 IVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGL 373

Query: 222 KPDVYTYTAVMD-----------------------------------GFCKVGRSNEAME 246
            P   TY+A+++                                   GFC +G   +A  
Sbjct: 374 VPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATA 433

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           + ++ ++ G +PNV+T+N + + Y K+G     + LL++MK      D  +Y+ L++G  
Sbjct: 434 IFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFS 493

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           + GK+  A S+F EMV  G   +    N+++ G    +      ++DA  +F KM +  +
Sbjct: 494 RGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAK-----VDDALALFWKMVESGN 548

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           V   GTY ++I    K  +  EA       ++ G +P  IT+ + I  LC  G+   A  
Sbjct: 549 VPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFK 608

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           +   M +    P+  +Y  LI  L Q  ++ DA
Sbjct: 609 IFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA 641



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 192/407 (47%), Gaps = 11/407 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + +   +KK G   +V  +  L+  L    + E A+  + +  + GL P + T+S +I
Sbjct: 325 EAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALI 384

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                +  F  A  + + M  +   PN  T+ +++   C  G +++A  + DQM + G  
Sbjct: 385 NQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPS 444

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN+ TYN ++      G +  A  +L  +K +GLK D +TY  ++ GF + G+   A  L
Sbjct: 445 PNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSL 504

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            NE +E G++PNVVT+N + NGY         + L   M +   +P   +Y+ +++G  K
Sbjct: 505 FNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSK 564

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
             +I  A +   +MV+ G   +     S + GLC     +      A+++F +M K+   
Sbjct: 565 TNRISEAENFCGKMVKQGLLPNVITYTSFIDGLC-----KNGRTSLAFKIFHEMKKRDYF 619

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            +  TY  +I  L +  + ++A       ++ G  P   T+  +++ LCG+G+  +A  L
Sbjct: 620 PNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQL 675

Query: 428 LFLMYEHAKIPSRTSY-DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +  M +    PS   Y  +L+ +   LE    A  ++ + +  G  P
Sbjct: 676 VESMKKKGLQPSEEIYRALLVGQCKNLEVE-SALKIFDSMVTTGFQP 721



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 164/333 (49%), Gaps = 9/333 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +   + + + +K +G       + +L+       + E A   F+E   +G++PN  
Sbjct: 459 KQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVV 518

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  Y       +A  +   M ++G  P+  T+ ++++   K+ R+ EA     +M
Sbjct: 519 TYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKM 578

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  PN+ TY   + GLC  GR   A+++   +K     P++ TY++++DG C+ G++
Sbjct: 579 VKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQA 638

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  LL++  E    PNV T+ TL  G C +G   +   L++ MKK+   P +  Y  L
Sbjct: 639 EDAERLLDDGCE----PNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRAL 694

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L G  K  ++  A+ IF  MV  GF+       +L+  LC  ++ +K     A  +F+ M
Sbjct: 695 LVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQK-----AQCMFQTM 749

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            KK   +D   + +++  L K  +TD +L  LH
Sbjct: 750 LKKHWNSDEVVWTVLLDGLLKEGETDLSLELLH 782



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 4/261 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +  + + + + +F  + + G   S   +N ++      N    A  F  +    GL PN 
Sbjct: 528 LTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNV 587

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++  I   C       A K+   M    Y PN+ T++ L++ LC+ G+ ++A  +LD 
Sbjct: 588 ITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD 647

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
               GC+PN+ TY  L++GLC  GR  EA +++ ++K  GL+P    Y A++ G CK   
Sbjct: 648 ----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLE 703

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A+++ +  +  G  P +  +  L    CK     K   + + M K++   D++ ++ 
Sbjct: 704 VESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTV 763

Query: 301 LLNGLLKWGKIRPAVSIFKEM 321
           LL+GLLK G+   ++ +   M
Sbjct: 764 LLDGLLKEGETDLSLELLHVM 784



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 4/230 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + + E  +    + K G   +V  +   +  L        A K F E       PN  
Sbjct: 564 KTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLC 623

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I   C +    +A +++D    +G  PNV T+T LV  LC  GR  EA ++++ M
Sbjct: 624 TYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESM 679

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G +P+ + Y  LL G C    VE A ++  ++   G +P +  Y A++   CK    
Sbjct: 680 KKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFR 739

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
            +A  +    +++    + V +  L +G  KEG     + LL +M+ RNC
Sbjct: 740 QKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNC 789



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 5/215 (2%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +    F+D + K         IF  +KK     ++  ++ L+  L    + E A + 
Sbjct: 585 PNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL 644

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             +    G  PN  T++ ++R  C K   +EA ++++ M   G  P+   +  L+   CK
Sbjct: 645 LDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCK 700

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +  ++ AL++ D M   G +P +  Y  L+  LC     ++A  M   +       D   
Sbjct: 701 NLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVV 760

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           +T ++DG  K G ++ ++ELL+    R  T N  T
Sbjct: 761 WTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQT 795



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 60/137 (43%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   + +S+KK G   S   +  LL+      E E+A+K F    + G  P    +  +I
Sbjct: 671 EADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALI 730

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C  N   +A+ +   M    ++ +   +T+L++ L K G    +LE+L  M    C 
Sbjct: 731 CALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCT 790

Query: 188 PNIQTYNCLLKGLCYVG 204
            N QT   L + L  +G
Sbjct: 791 LNFQTRVMLARELSALG 807


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 214/447 (47%), Gaps = 15/447 (3%)

Query: 30  VVFAAASLSTAESLDLKENP-RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNW-SVSD 87
           VV    SLS      L + P  SL A   + R   +PL  R+  F  + +      +   
Sbjct: 100 VVLRLHSLSPPPLRPLFDRPFASLLAH--LSRFALAPLALRL--FAHMHRHAPPAPTAPT 155

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++ +L    +   A+++ S     G  P+++TF+ +I  YC  N    AR + D M 
Sbjct: 156 YNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 215

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G+  +V ++  L+  LC++GR+ EA+E+  +M     +P++  Y  L+KGLC   R E
Sbjct: 216 LRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGE 271

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           E   ML  +K  G +P    Y AV+D  C+  ++ EA E+L E  E+G+ P VVT   + 
Sbjct: 272 EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 331

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           N YCKEG     + +L+LMK R C P+  +Y+ L+ G    GK+  A+++  +M   G  
Sbjct: 332 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN 391

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    N L+RG C+        +E A+++   M     + D  TY  +I  L K  +TD
Sbjct: 392 PDAVTYNLLIRGQCIDGH-----IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A          G  P  +TFN++I  LC  GK D A   L  M      P   +Y   I
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506

Query: 448 TKLDQLEKSYDACALYGAALKQGVIPQ 474
             L +++ S +  +  G  L++ V P 
Sbjct: 507 EHLCKMKGSQEGLSFIGEMLQKDVKPS 533



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 207/458 (45%), Gaps = 92/458 (20%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A +   E    GLAP   T + +I  YC +    +A +V++ M   G  PNV T+  LV 
Sbjct: 308 AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQ 367

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             C  G++ +A+ +L++M   G  P+  TYN L++G C  G +E A+ +L  ++ DGL  
Sbjct: 368 GFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA 427

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG--------- 274
           D YTY A+++  CK GR+++A  L +    RG+ PN VTFN+L NG CK G         
Sbjct: 428 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFL 487

Query: 275 --------TP--------------MKG------------------------VGLLKLMKK 288
                   TP              MKG                        + + KL+K+
Sbjct: 488 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 547

Query: 289 RN---------------CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           RN               C PD ++Y+T +      G++  A ++  EM + G  VD    
Sbjct: 548 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 607

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL--- 390
           N+L+ G    S  + D    A  + ++MT   SV +  TY I++R L + +  ++ L   
Sbjct: 608 NTLMDG--HASIGQTD---HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 662

Query: 391 -IHLHHAIEMGHI-------------PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
              +  AIE+  +             P + T++++++    +G+ ++A  L+ LM E + 
Sbjct: 663 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 722

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             +   Y  L+T   + ++  DA  L  + ++ G IPQ
Sbjct: 723 SLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQ 760



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 183/387 (47%), Gaps = 11/387 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E +++F  + +   +     +  L+  L      E  +         G  P++ 
Sbjct: 235 EAGRIDEAVELFGEMDQPDMHM----YAALVKGLCNAERGEEGLLMLRRMKELGWRPSTR 290

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ ++   C +    EA +++  MF+ G  P V T T ++N+ CK GR+ +AL VL+ M
Sbjct: 291 AYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELM 350

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GCKPN+ TYN L++G C  G+V +A  +L  ++  G+ PD  TY  ++ G C  G  
Sbjct: 351 KLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHI 410

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A  LL      G+  +  T+N L N  CK+G   +   L   ++ R   P+ +++++L
Sbjct: 411 ESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSL 470

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEK 360
           +NGL K GK   A    ++MV  G   D    +S +  LC MK  +E   L    ++ +K
Sbjct: 471 INGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG--LSFIGEMLQK 528

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
             K  +V     Y IVI  L K +            +  G  P  +T+   ++A C EG+
Sbjct: 529 DVKPSTV----NYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 584

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +++A  +L  M ++       +Y+ L+
Sbjct: 585 LNEAENVLMEMSKNGVTVDTMAYNTLM 611



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 164/393 (41%), Gaps = 12/393 (3%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + + ++  G N     +N L+    +    E+A +        GL  + +T++ +I  
Sbjct: 379 MTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 438

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C      +A  + D +   G  PN  TF  L+N LCKSG+   A + L++M   GC P+
Sbjct: 439 LCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPD 498

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TY+  ++ LC +   +E    +  +    +KP    YT V+    K            
Sbjct: 499 TYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWG 558

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E +  G  P+VVT+ T    YC EG   +   +L  M K     D ++Y+TL++G    G
Sbjct: 559 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 618

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL------------LEDAYQV 357
           +   AVSI K+M       ++     LLR L      E  L            L D + +
Sbjct: 619 QTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGL 678

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           F+ M K   + + GTY  ++    +  +T+EA   +    E         +  ++   C 
Sbjct: 679 FDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCK 738

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             +   A +L+  M +H  IP   SY  L++ L
Sbjct: 739 SKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGL 771



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 19/279 (6%)

Query: 105 VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
            + + E  S G  P+  T++  +R YC +    EA  V+  M  NG   +   +  L++ 
Sbjct: 554 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 613

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM------------ 212
               G+   A+ +L QM  +   PN  TY  LL+ L  +  VE+   +            
Sbjct: 614 HASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELT 673

Query: 213 ----LMNV-KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
               L +V K +   P+  TY+++++GF + GR+ EA  L++   E  ++ N   +  L 
Sbjct: 674 DVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 733

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             +CK    +    L+  M +   +P  +SY  LL+GL+  G+   A  IF       + 
Sbjct: 734 TCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYS 793

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
            DE +   ++ GL  K     D+  +   + E+M  + S
Sbjct: 794 PDEIVWKVIIDGLIKKG--HSDISREMIIMLERMNCRPS 830



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 22/257 (8%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++   + K+G       +N L+     + + + AV    + +S    PN +T+ I
Sbjct: 585 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 644

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++R           R V D +             +    + K+  L +   + D M +  
Sbjct: 645 LLR------HLVRMRLVEDVL------------PLTPAGVWKAIELTDVFGLFDVMKKNE 686

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TY+ +L+G    GR EEA  ++  +K D +  +   YTA++  FCK  R  +A 
Sbjct: 687 FLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAW 746

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L+   I+ G  P ++++  L +G   EG   K   +    + ++  PD+I +  +++GL
Sbjct: 747 VLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 806

Query: 306 LKWGKIRPAVSIFKEMV 322
           +K G       I +EM+
Sbjct: 807 IKKGH----SDISREMI 819



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/172 (18%), Positives = 74/172 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L +   +FD +KK+    +   ++ +L         E A    S      ++ N  
Sbjct: 668 KAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNED 727

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ ++ C+C    + +A  ++  M  +G+ P + ++  L++ L   G+  +A E+    
Sbjct: 728 IYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNS 787

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
                 P+   +  ++ GL   G  + + EM++ ++    +P   TY  + +
Sbjct: 788 RWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 839


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 221/432 (51%), Gaps = 14/432 (3%)

Query: 33  AAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERI----DIFDSIKKDGTNWSVSDF 88
           AA   +  + L LK  P  L     ++ +   P K  +     IF  + K G   + + F
Sbjct: 158 AAQIFNRMKRLHLK--PNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTF 215

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N L+    + N+   A+    +   +   P++ +++ ++   C K    EAR ++  M +
Sbjct: 216 NILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKN 275

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           NG  PN  TF ILV+  CK G LKEA +V+D M +    P++ TYN L+ GLC  G+++E
Sbjct: 276 NGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDE 335

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A+ +   ++N  L PDV TY  +++G      S +  EL+++   +GV PN VT+N +  
Sbjct: 336 AFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVK 395

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
            Y KEG        L+ M++    PD ++++TL+NG  K G++  A  +  EM R G ++
Sbjct: 396 WYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKM 455

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +   +N++L  LC    E K  L+DAY++    +K+    D  +YG +I    K  K+ E
Sbjct: 456 NSVTLNTILHTLC---GERK--LDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVE 510

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI- 447
           A+       E   IP  IT+N +I  LC  GK D+++  L  + E   +P  T+Y+ +I 
Sbjct: 511 AMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIIL 570

Query: 448 --TKLDQLEKSY 457
              +  Q+EK++
Sbjct: 571 GYCREGQVEKAF 582



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 172/327 (52%), Gaps = 5/327 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+ PN+ T++++++ Y  +     A   +  M ++G+ P+  TF  L+N  CK+GRL EA
Sbjct: 382 GVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEA 441

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
             ++D+M R G K N  T N +L  LC   ++++AY++L +    G   D  +Y  ++ G
Sbjct: 442 FRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMG 501

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           + K G+S EAM+L +E  E+ + P+++T+NT+  G C  G   + +  L  + +   +PD
Sbjct: 502 YFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPD 561

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
           + +Y+T++ G  + G++  A     +MV+  F+ D    N LLRGLC +      +L+ A
Sbjct: 562 ETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEG-----MLDKA 616

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++F     K    D  TY  +I  L K  + +EA   L    E    P   T+N ++ A
Sbjct: 617 LKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSA 676

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRT 441
           L   G++ +A   +  + E  K+  +T
Sbjct: 677 LADAGRMKEAEEFMSRIVEQGKLQDQT 703



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 196/453 (43%), Gaps = 75/453 (16%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N +L  L    +   A     +  + GL PN  TF+I++  YC      EA +VID M 
Sbjct: 250 YNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEAL-------------------------------- 175
            N   P+V T+ +L+  LCK G++ EA                                 
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSL 369

Query: 176 ---EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
              E++D+M   G KPN  TYN ++K     G+++ A   L  ++  G  PD  T+  ++
Sbjct: 370 KGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLI 429

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN------------------------ 268
           +G+CK GR +EA  +++E   +G+  N VT NT+ +                        
Sbjct: 430 NGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF 489

Query: 269 -----------GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
                      GY K+G  ++ + L   MK++  +P  I+Y+T++ GL   GK   ++  
Sbjct: 490 VDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDK 549

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             E++  G   DE   N+++ G C +   EK     A+Q   KM KK    D  T  I++
Sbjct: 550 LNELLESGLVPDETTYNTIILGYCREGQVEK-----AFQFHNKMVKKSFKPDLFTCNILL 604

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
           R L      D+AL   +  I  G     +T+N +I  LC E + ++A  LL  M E    
Sbjct: 605 RGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLG 664

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           P   +Y+ +++ L    +  +A       ++QG
Sbjct: 665 PDCYTYNAILSALADAGRMKEAEEFMSRIVEQG 697



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 208/405 (51%), Gaps = 8/405 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQET---AVKFFSEASSYGLAPNSWTFSIMIR 128
           IF+ +K+     ++   N L+ ALV    + +   +   FS+    G+  N+ TF+I+I 
Sbjct: 161 IFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIY 220

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
             C +N   EA  +I  M D    P+  ++  +++ LCK G+L EA ++L  M   G  P
Sbjct: 221 GCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLP 280

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N  T+N L+ G C +G ++EA +++  +  + + PDV+TY  ++ G CK G+ +EA  L 
Sbjct: 281 NRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLK 340

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +E     + P+VVT+NTL NG     + +KG  L+  M+ +   P+ ++Y+ ++   +K 
Sbjct: 341 DEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKE 400

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           GK+  A +  ++M   GF  D    N+L+ G C     +   L +A+++ ++M++K    
Sbjct: 401 GKMDNAGNELRKMEESGFSPDCVTFNTLINGYC-----KAGRLSEAFRMMDEMSRKGLKM 455

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +  T   ++ TL   +K D+A   L  A + G+    +++  +I     +GK  +A+ L 
Sbjct: 456 NSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLW 515

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M E   IPS  +Y+ +I  L    K+  +       L+ G++P
Sbjct: 516 DEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVP 560



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 131/264 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E   + D + + G   +    N +L  L    + + A K  S AS  G   +  
Sbjct: 434 KAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEV 493

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++  +I  Y       EA K+ D M +    P++ T+  ++  LC SG+  ++++ L+++
Sbjct: 494 SYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNEL 553

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TYN ++ G C  G+VE+A++    +     KPD++T   ++ G C  G  
Sbjct: 554 LESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGML 613

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A++L N  I +G   + VT+NT+ +G CKE    +   LL  M+++   PD  +Y+ +
Sbjct: 614 DKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAI 673

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFG 325
           L+ L   G+++ A      +V  G
Sbjct: 674 LSALADAGRMKEAEEFMSRIVEQG 697



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 133/298 (44%), Gaps = 23/298 (7%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L +   +  S  K G       +  L+M      +   A+K + E     + P+  T++ 
Sbjct: 473 LDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNT 532

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI   C+     ++   ++ + ++G  P+ TT+  ++   C+ G++++A +  ++M +  
Sbjct: 533 MIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKS 592

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KP++ T N LL+GLC  G +++A ++     + G   D  TY  ++ G CK  R  EA 
Sbjct: 593 FKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAF 652

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL------------- 292
           +LL E  E+ + P+  T+N + +     G   +    +  + ++  L             
Sbjct: 653 DLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIE 712

Query: 293 ----------PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
                     P+ +++S  +N L   GK + A+ + +E  + G  + +    SL+ GL
Sbjct: 713 SSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGL 770



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 10/194 (5%)

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV----S 316
           V  +T    Y     P     +   MK+ +  P+ ++ +TL+N L+++   +P+V    +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPS-KPSVYLSKA 198

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           IF ++++ G +V+    N L+ G C+     ++ L +A  +  KM       D  +Y  +
Sbjct: 199 IFSDVIKLGVKVNTNTFNILIYGCCI-----ENKLSEAIGLIGKMKDFSCFPDNVSYNTI 253

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +  L K  K +EA   L      G +P   TFN ++   C  G + +A  ++ LM ++  
Sbjct: 254 LDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNV 313

Query: 437 IPSRTSYDMLITKL 450
           +P   +Y+MLI  L
Sbjct: 314 LPDVWTYNMLIGGL 327


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 200/381 (52%), Gaps = 5/381 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +F  ++++G   +V  +N ++ +L        A+ F SE    G+ P++ T++ ++  
Sbjct: 218 VHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHG 277

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C      EA ++   M  NG  P+V T+ I+++SL K   + +A + L +M   G  P+
Sbjct: 278 LCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPD 337

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY  +L GLCY+G++ EA  +   ++  G KPDV  Y  ++D  CK    N+AME L+
Sbjct: 338 VVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLS 397

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E ++RG+ PN VT++T+ +G+C  G   +   L K M  RN +P+ +++S L++GL + G
Sbjct: 398 EMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEG 457

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +  A  +F+ M   G E +    N+L+ G C++       + +A +VFE M  K    D
Sbjct: 458 MVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK-----MNEARKVFEIMVGKGCAPD 512

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             +Y I+I      ++ D+A   L         P T+T+N +++ LC  G++  A  L  
Sbjct: 513 LHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFK 572

Query: 430 LMYEHAKIPSRTSYDMLITKL 450
            M     +P+  +Y +L+  L
Sbjct: 573 KMCSSGMLPTLMTYSILLNGL 593



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 201/390 (51%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ +F   L ++  + +  T V   ++   +G+    ++ +I+I C C  N    A  V 
Sbjct: 92  SIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVW 151

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             MF  G  P+V TFT L+N +C  G++K A+E+ ++M R G +P++ +YN L+ GLC  
Sbjct: 152 GKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNS 211

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A  +   ++ +G KP+V TY  ++D  CK    N+AM+ L+E + RG+ P+ +T+
Sbjct: 212 GNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITY 271

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N++ +G C  G   +   L K M++  C PD ++Y+ +++ L K   +  A     EMV 
Sbjct: 272 NSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVD 331

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D     ++L GLC         L +A ++F+KM +K    D   Y  +I +L K 
Sbjct: 332 QGIPPDVVTYTTILHGLCYLGQ-----LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKD 386

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           +  ++A+  L   ++ G  P  +T++ ++   C  G++D+A  L   M     +P+  ++
Sbjct: 387 RLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTF 446

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +L+  L Q     +A  ++    ++GV P
Sbjct: 447 SILVDGLCQEGMVSEARWVFETMTEKGVEP 476



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 197/407 (48%), Gaps = 17/407 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L  ++D+F      G   +V   N L+  L  LN  + AV  + +    G+ P+  TF+ 
Sbjct: 115 LCNQMDLF------GVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTT 168

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   CN+     A ++ + M  +G+ P+V ++  L+N LC SG    A+ V  +M + G
Sbjct: 169 LINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNG 228

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CKPN+ TYN ++  LC    V +A + L  +   G+ PD  TY +++ G C +G+ NEA 
Sbjct: 229 CKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEAT 288

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L     + G  P+VVT+N + +   K+         L  M  +   PD ++Y+T+L+GL
Sbjct: 289 RLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGL 348

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G++  A+ +FK+M + G + D    N+++  LC     +  L+ DA +   +M  + 
Sbjct: 349 CYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLC-----KDRLVNDAMEFLSEMVDRG 403

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY  ++       + DEA       +    +P T+TF+ ++  LC EG + +A 
Sbjct: 404 IPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEAR 463

Query: 426 LLLFLMYEHAKIPSRTSYDMLIT------KLDQLEKSYDACALYGAA 466
            +   M E    P+  +Y+ L+       K+++  K ++     G A
Sbjct: 464 WVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCA 510



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 192/378 (50%), Gaps = 5/378 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + ++  + K G    V  F  L+  +    + + AV+ ++E    G  P+  +++ +I  
Sbjct: 148 VSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLING 207

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            CN  +   A  V   M  NG  PNV T+  +++SLCK   + +A++ L +M   G  P+
Sbjct: 208 LCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPD 267

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN ++ GLC +G++ EA  +   ++ +G KPDV TY  ++D   K    N+A + L+
Sbjct: 268 AITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLS 327

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E +++G+ P+VVT+ T+ +G C  G   + + L K M+++ C PD ++Y+T+++ L K  
Sbjct: 328 EMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDR 387

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +  A+    EMV  G   +    +++L G C         L++A Q+F++M  +  + +
Sbjct: 388 LVNDAMEFLSEMVDRGIPPNAVTYSTILHGFC-----NLGQLDEATQLFKEMVGRNVMPN 442

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             T+ I++  L +     EA        E G  P   T+N ++   C   K+++A  +  
Sbjct: 443 TLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFE 502

Query: 430 LMYEHAKIPSRTSYDMLI 447
           +M      P   SY++LI
Sbjct: 503 IMVGKGCAPDLHSYNILI 520



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 167/325 (51%), Gaps = 7/325 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E I +F  +++ G    V  +N ++ +L        A++F SE    G+ PN+ T+S 
Sbjct: 354 LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  +CN     EA ++   M      PN  TF+ILV+ LC+ G + EA  V + M   G
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PNI TYN L+ G C   ++ EA ++   +   G  PD+++Y  +++G+C   R ++A 
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAK 533

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL +   + +TPN VT+NT+  G C  G  +    L K M     LP  ++YS LLNGL
Sbjct: 534 ALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGL 593

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +  A+ +FK M     E D  +   L+ G+ +        LE A  +F K++   
Sbjct: 594 CKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGK-----LEVAKGLFSKLSAD- 647

Query: 366 SVTDPG-TYGIVIRTLGKGKKTDEA 389
            +  PG TY ++I+ L K   +DEA
Sbjct: 648 GIQPPGRTYNVMIKGLLKEGLSDEA 672



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 168/354 (47%), Gaps = 5/354 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D    +   G    V  +  +L  L  L +   A++ F +    G  P+   ++ +I   
Sbjct: 324 DFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSL 383

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A + +  M D G  PN  T++ +++  C  G+L EA ++  +M      PN 
Sbjct: 384 CKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNT 443

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            T++ L+ GLC  G V EA  +   +   G++P++YTY A+M+G+C   + NEA ++   
Sbjct: 444 LTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEI 503

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + +G  P++ ++N L NGYC      K   LL  M  +   P+ ++Y+T++ GL   G+
Sbjct: 504 MVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR 563

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A  +FK+M   G        + LL GLC     +   L++A ++F+ M +K    D 
Sbjct: 564 LLDAQELFKKMCSSGMLPTLMTYSILLNGLC-----KHGHLDEALKLFKSMKEKKLEPDI 618

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             Y I+I  +  G K + A          G  P   T+N +I+ L  EG  D+A
Sbjct: 619 ILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEA 672



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 159/321 (49%), Gaps = 5/321 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  F   + S+ K  +    + + +QM   G    + + N L+  LC +  V+ A  +
Sbjct: 91  PSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSV 150

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G++PDV T+T +++G C  G+   A+EL NE +  G  P+V+++NTL NG C 
Sbjct: 151 WGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCN 210

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     V + K M++  C P+ ++Y+T+++ L K   +  A+    EMV  G   D   
Sbjct: 211 SGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAIT 270

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            NS++ GLC         L +A ++F++M +     D  TY I+I +L K +  ++A   
Sbjct: 271 YNSIVHGLCCLGQ-----LNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADF 325

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L   ++ G  P  +T+  ++  LC  G++++A+ L   M +    P   +Y+ +I  L +
Sbjct: 326 LSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCK 385

Query: 453 LEKSYDACALYGAALKQGVIP 473
                DA       + +G+ P
Sbjct: 386 DRLVNDAMEFLSEMVDRGIPP 406



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 114/213 (53%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F   +  G+ PN +T++ ++  YC +    EARKV + M   G  P++ ++ IL+N  C 
Sbjct: 466 FETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCN 525

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           S R+ +A  +L QM      PN  TYN ++KGLCYVGR+ +A E+   + + G+ P + T
Sbjct: 526 SRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMT 585

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y+ +++G CK G  +EA++L     E+ + P+++ +  L  G    G      GL   + 
Sbjct: 586 YSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLS 645

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
                P   +Y+ ++ GLLK G    A  +F++
Sbjct: 646 ADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 112/227 (49%), Gaps = 1/227 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P +L     VD + +   + E   +F+++ + G   ++  +N L+    +  +   A K 
Sbjct: 441 PNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKV 500

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F      G AP+  +++I+I  YCN     +A+ ++  M      PN  T+  ++  LC 
Sbjct: 501 FEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCY 560

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            GRL +A E+  +M   G  P + TY+ LL GLC  G ++EA ++  ++K   L+PD+  
Sbjct: 561 VGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIIL 620

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
           YT +++G    G+   A  L ++    G+ P   T+N +  G  KEG
Sbjct: 621 YTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEG 667



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 91/183 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   +F+ +   G    +  +N L+         + A    ++ S   L PN+ T++ 
Sbjct: 494 MNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNT 553

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C      +A+++   M  +G  P + T++IL+N LCK G L EAL++   M    
Sbjct: 554 IMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKK 613

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +P+I  Y  L++G+   G++E A  +   +  DG++P   TY  ++ G  K G S+EA 
Sbjct: 614 LEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAY 673

Query: 246 ELL 248
           EL 
Sbjct: 674 ELF 676


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 200/377 (53%), Gaps = 5/377 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           + F+   K G   +V+ FN ++    + N+ + AV+F +    Y  +P++ T++ ++   
Sbjct: 194 EAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDAL 253

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C K    +AR ++  M   G  PN  T+ ILV   CK G LKEA  V++ M +    P++
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L+ GLC  GR+EEA+++   ++N  L PDV +Y  +++G  +  + +EA +LL E
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEE 373

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             E+GV PN VT N +   YCKEG        +  M++    PD ++Y+TL+NG  K G 
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A     EM R   ++D   +N++LR LC    E+K  LE+AY++     K+    D 
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR---EKK--LEEAYKLLSSARKRGYFIDE 488

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            +YG +I    K    D AL       E   IP T+T+N +I  LC  GK ++A+  L  
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548

Query: 431 MYEHAKIPSRTSYDMLI 447
           + E   +P  T+Y+ ++
Sbjct: 549 LLESGLLPDETTYNTIL 565



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 182/356 (51%), Gaps = 5/356 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+   +  ++   A K   E S  G+ PN+ T +IM++ YC +    +A   I 
Sbjct: 348 VVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M ++G+ P+  T+  L+N  CK+G + EA   +D+MGR   K +  T N +L+ LC   
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           ++EEAY++L + +  G   D  +Y  ++ G+ K G  + A++L +E  E+ + P+ VT+N
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            +  G C+ G   + +  L  + +   LPD+ +Y+T+L+G  + G +  A     +MV  
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
            F+ D    N LLRGLCM+      +LE A ++F     K    D  TY  +I +L K  
Sbjct: 588 SFKPDVFTCNILLRGLCMEG-----MLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
           + D+A   L    E    P   T+N +I AL   G+I +A   +  M E   +P +
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQ 698



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 190/363 (52%), Gaps = 5/363 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N +L AL        A     +  S GL PN  T++I++  YC      EA  VI+ M 
Sbjct: 246 YNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            N   P+V T+ +L+N LC  GR++EA ++ D+M  +   P++ +YN L+ G     ++ 
Sbjct: 306 QNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKIS 365

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA+++L  +   G+KP+  T+  ++  +CK G+ ++A   + +  E G +P+ VT+NTL 
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLI 425

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NGYCK G   +    +  M ++N   D ++ +T+L  L +  K+  A  +     + G+ 
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYF 485

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           +DE    +L+ G     + +   ++ A +++++M +K  +    TY  +I  L +  KT+
Sbjct: 486 IDEVSYGTLIVG-----YFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A+  L+  +E G +P   T+N ++   C EG ++KA      M E++  P   + ++L+
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600

Query: 448 TKL 450
             L
Sbjct: 601 RGL 603



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 200/417 (47%), Gaps = 5/417 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   LKE  ++ + + ++     V  +N L+  L      E A K   E  +  L P+  
Sbjct: 290 KMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVV 349

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +I      +   EA K+++ M + G  PN  T  I+V   CK G++ +A   + +M
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKM 409

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TYN L+ G C  G + EA+  +  +    +K D  T   ++   C+  + 
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKL 469

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +LL+ A +RG   + V++ TL  GY K+G   + + L   MK++  +P  ++Y+ +
Sbjct: 470 EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCI 529

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL + GK   A+S   E++  G   DE   N++L G C     E D +E A+Q   KM
Sbjct: 530 IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC----REGD-VEKAFQFHNKM 584

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +     D  T  I++R L      ++AL   +  +  G    T+T+N +I +LC EG++
Sbjct: 585 VENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRL 644

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQ 478
           D A  LL  M E    P   +Y+ +IT L    +  +A       L++G +P +  Q
Sbjct: 645 DDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQ 701



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 166/424 (39%), Gaps = 103/424 (24%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK-------------- 198
           P+       + +  +SG+   A ++  +M R+  +PN+ T N LL               
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 199 ------------------------GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
                                   G C   + ++A E L  +      PD  TY  ++D 
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN---- 290
            CK GR  +A +LL +   RG+ PN  T+N L  GYCK G   +   +++LM + N    
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 291 -------------------------------CLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
                                           LPD +SY+TL+NG L+W KI  A  + +
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 320 EMVRFGFEVDERMMNSLLRGLC-----------MKSWEEKDLLED--------------- 353
           EM   G + +    N +++  C           +   EE     D               
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 354 ----AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
               A++  ++M +K    D  T   ++RTL + KK +EA   L  A + G+    +++ 
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I     +G +D+AL L   M E   IPS  +Y+ +I  L Q  K+  A +     L+ 
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552

Query: 470 GVIP 473
           G++P
Sbjct: 553 GLLP 556



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 23/274 (8%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            V   K   +   + ++D +K+     S   +N ++  L    + E A+   +E    GL
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P+  T++ ++  YC + D  +A +  + M +N + P+V T  IL+  LC  G L++AL+
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALK 614

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           + +     G   +  TYN L+  LC  GR+++A+ +L  ++   L PD YTY A++    
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674

Query: 237 KVGRSNEAMELLNEAIERGVTP-----------------------NVVTFNTLFNGYCKE 273
             GR  EA E +++ +E+G  P                       + V ++      C E
Sbjct: 675 DSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTE 734

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           G     + +    K++    DK +Y  L++GL+K
Sbjct: 735 GKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 137/300 (45%), Gaps = 27/300 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E   +  S +K G       +  L++        + A+K + E     + P++ T++ 
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528

Query: 126 MIR--CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           +I   C C K +  +A   ++ + ++G  P+ TT+  +++  C+ G +++A +  ++M  
Sbjct: 529 IIGGLCQCGKTE--QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
              KP++ T N LL+GLC  G +E+A ++     + G   D  TY  ++   CK GR ++
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDD 646

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK-------- 295
           A  LL+E  E+ + P+  T+N +       G   +    +  M ++  LP +        
Sbjct: 647 AFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNE 706

Query: 296 ---------------ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
                          ++YS  +  L   GK + A+ IF E  + G  VD+    +L+ GL
Sbjct: 707 TVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 12/224 (5%)

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           +++ GF    R ++    L+ +I R  +P+    +T    Y + G P     + K MK+ 
Sbjct: 109 SLLLGFIATDRRHD----LHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRL 164

Query: 290 NCLPDKISYSTLLNGLLKW---GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
              P+ ++ +TLLN L+++     +  +   F + ++ G   +    N ++ G C+    
Sbjct: 165 RLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCL---- 220

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
            ++  +DA +    M K     D  TY  ++  L K  +  +A   L      G +P   
Sbjct: 221 -ENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRN 279

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           T+N ++   C  G + +A  ++ LM ++  +P   +Y+MLI  L
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 23/176 (13%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N LL  L M    E A+K F+   S G A ++ T++ +I   C +    +A  ++  M +
Sbjct: 597 NILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEE 656

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN------------------- 189
               P+  T+  ++ +L  SGR++EA E + +M   G  P                    
Sbjct: 657 KELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEE 716

Query: 190 ----IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                  Y+  +K LC  G+ ++A  +    K  G+  D  TY  +MDG  K  +S
Sbjct: 717 SDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKS 772


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 208/402 (51%), Gaps = 5/402 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +  + + + + +F+ + +     S+ DF+ LL ++  +    T +  + +  S+G+  N+
Sbjct: 30  LNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNT 89

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T +I+I  +C+ N    A  V+  +   GY P+  TFT L+  LC  G++ EAL++ D+
Sbjct: 90  YTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDK 149

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G +P++ TY  L+ GLC VG    A   L +++    +P V  Y+ ++D  CK  +
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQ 209

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA+ L ++ + +G++PN  T+++L +G C  G   + + L   M  R  +PD+++++T
Sbjct: 210 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNT 269

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++ L K G +  A  +   M++   + D    NSL+ G C++S   K +      VF+ 
Sbjct: 270 LVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTV-----NVFDT 324

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +K  V    +Y  +I    K +  D+A+       + G IP T+T+N +I  LC  G+
Sbjct: 325 MVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGR 384

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           +  A+ L   M  + +IP   +Y +L   L +  +  +A  L
Sbjct: 385 LRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVL 426



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 172/358 (48%), Gaps = 5/358 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E + +F  +   G + +   ++ L+  L +L   + A++ F       + P+  
Sbjct: 206 KDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQL 265

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ ++   C +    +A  V+D M  +   P+V T+  L++  C    + + + V D M
Sbjct: 266 TFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTM 325

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R GC P++ +Y  L+ G C +  +++A  +   +   GL PD  TY  ++ G C VGR 
Sbjct: 326 VRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 385

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L +E +  G  P++VT+  LF+  CK     + + LLK+++  N  PD   YS +
Sbjct: 386 RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 445

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G+ + G++  A  +F ++   G   D R    ++ GLC     ++ LL +A ++F +M
Sbjct: 446 MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLC-----QQGLLAEASKLFGEM 500

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            +     +  TY ++ R   +  +T  A+      +  G      T   +++ L  +G
Sbjct: 501 DENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 160/325 (49%), Gaps = 5/325 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+  FS+  + G++PN++T+S +I   C    + EA ++   M      P+  TF  LV+
Sbjct: 213 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD 272

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK G + +A  V+D M +   KP++ TYN L+ G C    + +   +   +   G  P
Sbjct: 273 ALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVP 332

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            V +YT +++G+CK+   ++AM L  E  ++G+ P+ VT+NTL +G C  G     + L 
Sbjct: 333 SVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALF 392

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M     +PD ++Y  L + L K  ++  A+ + K +     + D  + + ++ G+C +
Sbjct: 393 HEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMC-R 451

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           + E    LE A  +F K++ K    D  TY I+I  L +     EA        E G  P
Sbjct: 452 AGE----LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSP 507

Query: 404 RTITFNNVIQALCGEGKIDKALLLL 428
              T+N + +      +  +A+ L 
Sbjct: 508 NACTYNLITRGFLRNNETLRAIQLF 532



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 89/227 (39%), Gaps = 35/227 (15%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG------ 115
           K   + + + +F+ + + G       +N L+  L  +     A+  F E   YG      
Sbjct: 346 KIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLV 405

Query: 116 -----------------------------LAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
                                        L P+   +SI++   C   +   AR +   +
Sbjct: 406 TYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKL 465

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
              G HP+V T+TI++N LC+ G L EA ++  +M   GC PN  TYN + +G       
Sbjct: 466 SSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNET 525

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
             A ++   + + G   DV T T +++     G      ++L E ++
Sbjct: 526 LRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 5/238 (2%)

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           V   ++A+ L N  +     P++V F+ L     +       + L K M       +  +
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
            + L+N      ++  A S+  ++++ G++       +L+RGLC++       + +A Q+
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGK-----IGEALQL 146

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           F+KMT +    D  TYG +I  L K   T  A+  L    +    P  + ++ +I +LC 
Sbjct: 147 FDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCK 206

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           + ++ +AL L   M      P+  +Y  LI  L  L    +A  L+ A + + ++P +
Sbjct: 207 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQ 264


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 200/377 (53%), Gaps = 5/377 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           + F+   K G   +V+ FN ++    + N+ + AV+F +    Y  +P++ T++ ++   
Sbjct: 194 EAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTL 253

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C K    +AR ++  M   G  PN  T+ ILV   CK G LKEA  V++ M +    P++
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L+ GLC  GR+EEA+++   ++N  L PDV +Y  +++G  +  + +EA +LL E
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEE 373

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             E+GV PN VT N +   YCKEG        +  M++    PD ++Y+TL+NG  K G 
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A     EM R   ++D   +N++LR LC    E+K  LE+AY++     K+    D 
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR---EKK--LEEAYKLLSSARKRGYFIDE 488

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            +YG +I    K    D AL       E   IP T+T+N +I  LC  GK ++A+  L  
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548

Query: 431 MYEHAKIPSRTSYDMLI 447
           + E   +P  T+Y+ ++
Sbjct: 549 LLESGLLPDETTYNTIL 565



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 182/356 (51%), Gaps = 5/356 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+   +  ++   A K   E S  G+ PN+ T +IM++ YC +    +A   I 
Sbjct: 348 VVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M ++G+ P+  T+  L+N  CK+G + EA   +D+MGR   K +  T N +L+ LC   
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           ++EEAY++L + +  G   D  +Y  ++ G+ K G  + A++L +E  E+ + P+ VT+N
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            +  G C+ G   + +  L  + +   LPD+ +Y+T+L+G  + G +  A     +MV  
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
            F+ D    N LLRGLCM+      +LE A ++F     K    D  TY  +I +L K  
Sbjct: 588 SFKPDVFTCNILLRGLCMEG-----VLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
           + D+A   L    E    P   T+N +I AL   G+I +A   +  M E   +P +
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQ 698



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 189/363 (52%), Gaps = 5/363 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N +L  L        A     +  S GL PN  T++I++  YC      EA  VI+ M 
Sbjct: 246 YNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            N   P+V T+ +L+N LC  GR++EA ++ D+M  +   P++ +YN L+ G     ++ 
Sbjct: 306 QNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKIS 365

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA+++L  +   G+KP+  T+  ++  +CK G+ ++A   + +  E G +P+ VT+NTL 
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLI 425

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NGYCK G   +    +  M ++N   D ++ +T+L  L +  K+  A  +     + G+ 
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYF 485

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           +DE    +L+ G     + +   ++ A +++++M +K  +    TY  +I  L +  KT+
Sbjct: 486 IDEVSYGTLIVG-----YFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A+  L+  +E G +P   T+N ++   C EG ++KA      M E++  P   + ++L+
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600

Query: 448 TKL 450
             L
Sbjct: 601 RGL 603



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 200/417 (47%), Gaps = 5/417 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   LKE  ++ + + ++     V  +N L+  L      E A K   E  +  L P+  
Sbjct: 290 KMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVV 349

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +I      +   EA K+++ M + G  PN  T  I+V   CK G++ +A   + +M
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKM 409

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TYN L+ G C  G + EA+  +  +    +K D  T   ++   C+  + 
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKL 469

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +LL+ A +RG   + V++ TL  GY K+G   + + L   MK++  +P  ++Y+ +
Sbjct: 470 EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCI 529

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL + GK   A+S   E++  G   DE   N++L G C     E D +E A+Q   KM
Sbjct: 530 IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC----REGD-VEKAFQFHNKM 584

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +     D  T  I++R L      ++AL   +  +  G    T+T+N +I +LC EG++
Sbjct: 585 VENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRL 644

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQ 478
           D A  LL  M E    P   +Y+ +IT L    +  +A       L++G +P +  Q
Sbjct: 645 DDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQ 701



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 166/424 (39%), Gaps = 103/424 (24%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK-------------- 198
           P+       + +  +SG+   A ++  +M R+  +PN+ T N LL               
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 199 ------------------------GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
                                   G C   + ++A E L  +      PD  TY  ++D 
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN---- 290
            CK GR  +A +LL +   RG+ PN  T+N L  GYCK G   +   +++LM + N    
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 291 -------------------------------CLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
                                           LPD +SY+TL+NG L+W KI  A  + +
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 320 EMVRFGFEVDERMMNSLLRGLC-----------MKSWEEKDLLED--------------- 353
           EM   G + +    N +++  C           +   EE     D               
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 354 ----AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
               A++  ++M +K    D  T   ++RTL + KK +EA   L  A + G+    +++ 
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I     +G +D+AL L   M E   IPS  +Y+ +I  L Q  K+  A +     L+ 
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552

Query: 470 GVIP 473
           G++P
Sbjct: 553 GLLP 556



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 12/284 (4%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            V   K   +   + ++D +K+     S   +N ++  L    + E A+   +E    GL
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P+  T++ ++  YC + D  +A +  + M +N + P+V T  IL+  LC  G L++AL+
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALK 614

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           + +     G   +  TYN L+  LC  GR+++A+ +L  ++   L PD YTY A++    
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
             GR  EA E +++ +E+G  P+ V                K   ++            +
Sbjct: 675 DSGRIREAEEFMSKMLEKGNLPDQVL------------QLDKNETVVTSETSEESDSSSV 722

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           +YS  +  L   GK + A+ IF E  + G  VD+    +L+ GL
Sbjct: 723 AYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 102/224 (45%), Gaps = 12/224 (5%)

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           +++ GF    R ++    L+ +I R  +P+    +T    Y + G P     + K MK+ 
Sbjct: 109 SLLLGFIATDRRHD----LHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRL 164

Query: 290 NCLPDKISYSTLLNGLLKW---GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
              P+ ++ +TLLN L+++     +  +   F + ++ G   +    N ++ G C+    
Sbjct: 165 RLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCL---- 220

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
            ++  +DA +    M K     D  TY  ++ TL K  +  +A   L      G +P   
Sbjct: 221 -ENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRN 279

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           T+N ++   C  G + +A  ++ LM ++  +P   +Y+MLI  L
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 23/176 (13%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N LL  L M    E A+K F+   S G A ++ T++ +I   C +    +A  ++  M +
Sbjct: 597 NILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEE 656

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN------------------- 189
               P+  T+  ++ +L  SGR++EA E + +M   G  P+                   
Sbjct: 657 KELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEE 716

Query: 190 ----IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                  Y+  +K LC  G+ ++A  +    K  G+  D  TY  +MDG  K  +S
Sbjct: 717 SDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKS 772


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 202/388 (52%), Gaps = 6/388 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
             S+ + G   +V  +N L+ AL      E AV    +    G APN+ T++ ++  +C 
Sbjct: 140 LSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCR 199

Query: 133 KNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             +   A +V+  M + G   PN+ TF  +VN LCK+GR++ A +V D+M R G  P++ 
Sbjct: 200 AGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVV 259

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           +YN LL G C VG + E+  +   +   GL PDV T+T+++   CK G   +A+ L+ + 
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 319

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            ERG+  N VTF  L +G+CK+G     +  ++ M+K    P  + Y+ L+NG  K G++
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  + +EM     + D    ++++ G C         L+ A+Q+ +KM KK  + D  
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGN-----LDSAFQLNQKMLKKGVLPDAI 434

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +IR L + K+ ++A     + +++G  P   T+  +I   C EG ++KAL L   M
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDA 459
                +P   +Y +LI  L +  ++ +A
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEA 522



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 187/361 (51%), Gaps = 9/361 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G AP+   ++ ++    + +    AR+ +  M  +G  PNV T+ ILV +LC  GRL+EA
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG-LKPDVYTYTAVMD 233
           + V+  M   GC PN  TYN L+   C  G ++ A  ++  ++ +G  KP++ T+ ++++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G CK GR   A ++ +E +  G+ P+VV++NTL +GYCK G   + + +   M +R  +P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D +++++L++   K G +  AV++  +M   G  ++E    +L+ G C K +     L+D
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF-----LDD 346

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVI 412
           A    E+M K         Y  +I    K  + D A   L   +E   + P  +T++ +I
Sbjct: 347 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR-ELIREMEAKRVKPDVVTYSTII 405

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
              C  G +D A  L   M +   +P   +Y  LI  L + ++  DAC L+   L+ GV 
Sbjct: 406 SGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 465

Query: 473 P 473
           P
Sbjct: 466 P 466



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 170/311 (54%), Gaps = 8/311 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN ++  L      E A K F E    GLAP+  +++ ++  YC      E+  V   M 
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 285

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V TFT L+++ CK+G L++A+ ++ QM   G + N  T+  L+ G C  G ++
Sbjct: 286 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 345

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A   +  ++  G++P V  Y A+++G+CK+GR + A EL+ E   + V P+VVT++T+ 
Sbjct: 346 DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTII 405

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +GYCK G       L + M K+  LPD I+YS+L+ GL +  ++  A  +F+ M++ G +
Sbjct: 406 SGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 465

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            DE    +L+ G C +   EK     A  + ++M +K  + D  TY ++I  L K  +T 
Sbjct: 466 PDEFTYTTLIDGHCKEGNVEK-----ALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520

Query: 388 EA---LIHLHH 395
           EA   L  L+H
Sbjct: 521 EAHRLLFKLYH 531



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 195/413 (47%), Gaps = 55/413 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++    +FD + ++G    V  +N LL     +     ++  FSE +  GL P+  
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C   +  +A  ++  M + G   N  TFT L++  CK G L +AL  +++M
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG-- 239
            + G +P++  YN L+ G C +GR++ A E++  ++   +KPDV TY+ ++ G+CKVG  
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 240 ---------------------------------RSNEAMELLNEAIERGVTPNVVTFNTL 266
                                            R N+A EL    ++ GV P+  T+ TL
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF-----KEM 321
            +G+CKEG   K + L   M ++  LPD ++YS L+NGL K  + + A  +      ++ 
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534

Query: 322 VRFGFEVDERMMN----------SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           V    + D  M+           +LL+G CMK      L+++A +V++ M  +    D  
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG-----LMKEADKVYQSMLDRNWKLDGS 589

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            Y I+I    +G    +AL      +  G  P + +  ++++ L  EG + +A
Sbjct: 590 VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 15/264 (5%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G       ++ L+  L        A + F      G+ P+ +T++ +I  +C + +  
Sbjct: 426 KKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 485

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL---------------DQMG 182
           +A  + D M   G  P+V T+++L+N L KS R KEA  +L               D + 
Sbjct: 486 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
               K   ++   LLKG C  G ++EA ++  ++ +   K D   Y+ ++ G C+ G   
Sbjct: 546 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 605

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +A+    + +  G +PN  +  +L  G  +EG  ++    ++ +     L D  +   L+
Sbjct: 606 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALI 665

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGF 326
           +   K G +   + +   M R G 
Sbjct: 666 DLNRKEGNVDALIDVLCGMARDGL 689



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 64/134 (47%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++ +C K    EA KV   M D  +  + + ++IL++  C+ G +++AL    QM R G
Sbjct: 559 LLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG 618

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  +   L++GL   G V EA   + ++       D     A++D   K G  +  +
Sbjct: 619 FSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALI 678

Query: 246 ELLNEAIERGVTPN 259
           ++L      G+ P+
Sbjct: 679 DVLCGMARDGLLPS 692


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 222/438 (50%), Gaps = 14/438 (3%)

Query: 40  AESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVML 98
           +  +D + +P  +     +D + KA+ + + +++ +S+K  G +  V  +  L+  L   
Sbjct: 180 SHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKE 239

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
           ++   A +   E    G  PN  T++ ++   C      +A  ++  M   G  PNV T+
Sbjct: 240 SKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 299

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
             L++ LCK GR+K+A  +L  M   G  P++  YN L+ GLC   +V+E+  +L    +
Sbjct: 300 GTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 359

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            G+KPDV TY++V+ G C+  R +EA  LL     RG  P+V+ ++TL +G CK G   +
Sbjct: 360 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDE 419

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              L ++M    C  D ++YSTL++GL K G++  A  +   MVR G        NSL++
Sbjct: 420 AFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIK 479

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA-- 396
           GLC     + + L++A ++ E+M +        TY I+I  + + ++ D A++ L  A  
Sbjct: 480 GLC-----DLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKA 534

Query: 397 ---IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
                 G    TI ++++I  LC  G++ +AL     M ++  IP   +Y +L   L+ L
Sbjct: 535 RCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSIL---LEGL 591

Query: 454 EKSYDACALYGAALKQGV 471
           +KS D   L    L Q V
Sbjct: 592 KKSKDLHELRHLVLDQMV 609



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 187/396 (47%), Gaps = 12/396 (3%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +  LL       E + A + F E  S  L PN +  SI+I   C      +A +   
Sbjct: 9   VYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFR 68

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M  +G   +   +T L++ L K  RL +AL +L +M   GC+PN+ TYN L+ GLC   
Sbjct: 69  AMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNN 128

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-------GVT 257
             + A E+  ++K+    P + TY  ++DG  + G+   AM L  E ++R         +
Sbjct: 129 EPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCS 188

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PNV+T++ L +G CK     + V LL+ MK R C PD I+Y+ L++GL K  K+  A  +
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
            +EM+  G   +    NSLL GLC         + DA  +   MT +    +  TYG +I
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARR-----VSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L K  +  +A   L   I+ G  P  + +N +I  LC   ++D+++ LL         
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P   +Y  +I  L +  +  +AC L      +G  P
Sbjct: 364 PDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPP 399



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 197/418 (47%), Gaps = 27/418 (6%)

Query: 53  QAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
           QAQR  D +++  L   +    SI  DG              L        A++ F    
Sbjct: 27  QAQRCFDEMRSKNLVPNV-FLCSILIDG--------------LCKAKRSIDALRCFRAMQ 71

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
             G+  ++  ++ ++     +    +A  ++  M D+G  PNV T+  L++ LCK+    
Sbjct: 72  GSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPD 131

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-------KNDGLKPDV 225
            A E+ + M  + C P++ TYN LL GL   G++E A  +   +        +D   P+V
Sbjct: 132 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNV 191

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            TY+ ++DG CK  R ++A+ELL     RG +P+V+T+  L +G CKE        +L+ 
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 251

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M    C+P+ ++Y++LL+GL +  ++  A+++ ++M   G   +     +L+ GLC    
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 311

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                ++DA  +   M  K    D   Y ++I  L K  + DE++  L  A+  G  P  
Sbjct: 312 -----VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +T+++VI  LC   ++D+A  LL  +      P    Y  LI  L +  K  +A  LY
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 167/329 (50%), Gaps = 12/329 (3%)

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            P+V T+  L+   C+ G + +A    D+M      PN+   + L+ GLC   R  +A  
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
               ++  G+  D   YTA++ G  K  R ++A+ +L+E  + G  PNVVT+N+L +G C
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV-RFGFEVDE 330
           K   P +   L + MK   C P  ++Y+TLL+GL + GK+  A+++F+EM+ R   ++D+
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 331 R------MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           R        + L+ GLC     + + +  A ++ E M  +    D  TY I++  L K  
Sbjct: 186 RCSPNVITYSVLIDGLC-----KANRVSQAVELLESMKARGCSPDVITYTILVDGLCKES 240

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           K   A   L   ++ G +P  +T+N+++  LC   ++  AL L+  M      P+  +Y 
Sbjct: 241 KVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 300

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            LI  L ++ +  DACA+    + +G  P
Sbjct: 301 TLIDGLCKVGRVKDACAMLADMIDKGGTP 329



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 176/363 (48%), Gaps = 12/363 (3%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+ +T++ ++R +C   +  +A++  D M      PNV   +IL++ LCK+ R  +AL  
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
              M   G   +   Y  LL GL    R+++A  +L  +++ G +P+V TY +++DG CK
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-------N 290
               + A EL         +P++VT+NTL +G  + G   + + L + M  R        
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C P+ I+YS L++GL K  ++  AV + + M   G   D      L+ GLC +S      
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK----- 241

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           +  A++V  +M     V +  TY  ++  L + ++  +AL  +      G  P  +T+  
Sbjct: 242 VAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 301

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I  LC  G++  A  +L  M +    P    Y+MLI  L + ++  ++ AL   A+  G
Sbjct: 302 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361

Query: 471 VIP 473
           + P
Sbjct: 362 IKP 364


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 203/406 (50%), Gaps = 6/406 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K  ++I D + ++G +  +  +N L+  L  L E E AV+  ++      +PN+ T++ 
Sbjct: 332 VKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNT 391

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C +N   EA ++   +   G  P+V TF  L+  LC +   + A+E+ ++M   G
Sbjct: 392 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKG 451

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P+  TYN L+  LC  GR+EEA  +L  +++ G   +V TY  ++DGFCK  R  EA 
Sbjct: 452 CHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAE 511

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+ +E   +G++ NVVT+NTL +G CK     +   L+  M      PDK +Y++LL   
Sbjct: 512 EIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYF 571

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G I+ A  I + M   G E D     +L+ GL      +   +E A ++   +  K 
Sbjct: 572 CRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGL-----SKAGRVELASRLLRTVQLKG 626

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC-GEGKIDKA 424
            V  P TY  VI+ L + K+T EA+      +E G  P  +T+  V + LC G G I +A
Sbjct: 627 MVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEA 686

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +  L  M +   +P  +S+ ML   L  L        L    +KQ 
Sbjct: 687 VDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQA 732



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 197/370 (53%), Gaps = 7/370 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V+ FN L+ AL   ++   A+    E  SYGL+P+  TF+ +++ +  + +   A
Sbjct: 206 GIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGA 265

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            ++ + M   G   +  T  +LV+  CK GR++E L  +D+M   G +P+  T+N L+ G
Sbjct: 266 LRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNG 325

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC +G V+ A E+L  +  +G  PD++TY +++ G CK+G   EA+E+LN+ I R  +PN
Sbjct: 326 LCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPN 385

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VT+NTL +  CKE    +   L +++  +  LPD  ++++L+ GL      R A+ +F+
Sbjct: 386 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFE 445

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM   G   DE   N L+  LC +       LE+A  + ++M       +  TY  +I  
Sbjct: 446 EMKTKGCHPDEFTYNMLIDSLCSRGR-----LEEALSLLKEMESSGCSRNVVTYNTLIDG 500

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPR-TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
             K K+ +EA   +   +E+  I R  +T+N +I  LC   ++++A  L+  M      P
Sbjct: 501 FCKNKRIEEAE-EIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKP 559

Query: 439 SRTSYDMLIT 448
            + +Y+ L+T
Sbjct: 560 DKFTYNSLLT 569



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 202/409 (49%), Gaps = 6/409 (1%)

Query: 68  ERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           E + + D ++++ G       +N LL  LV  N+ +      S   S G+ P+  TF+I+
Sbjct: 158 EAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNIL 217

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I+  C  +    A  +++ M   G  P+  TFT L+    + G +  AL + +QM   GC
Sbjct: 218 IKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGC 277

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
             +  T N L+ G C  GR+EE    +  + N+G +PD +T+ ++++G C++G    A+E
Sbjct: 278 PSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALE 337

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           +L+  ++ G  P++ T+N+L  G CK G   + V +L  M  R+  P+ ++Y+TL++ L 
Sbjct: 338 ILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLC 397

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K  ++  A  + + +   G   D    NSL++GLC+ +         A ++FE+M  K  
Sbjct: 398 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRL-----AMELFEEMKTKGC 452

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY ++I +L    + +EAL  L      G     +T+N +I   C   +I++A  
Sbjct: 453 HPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEE 512

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +   M       +  +Y+ LI  L +  +  +A  L    L +G+ P +
Sbjct: 513 IFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDK 561



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 165/371 (44%), Gaps = 41/371 (11%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
             P+S  +  ++R       F   R+V+  M   G      TF IL+ S  K     EA+
Sbjct: 101 FVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAV 160

Query: 176 EVLD------------------------------------QMGRIGCKPNIQTYNCLLKG 199
            V+D                                    +M   G KP++ T+N L+K 
Sbjct: 161 AVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKA 220

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC   ++  A  M+  + + GL PD  T+T +M GF + G  N A+ +  + +  G   +
Sbjct: 221 LCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSS 280

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VT N L +GYCKEG   + +  +  M      PD+ ++++L+NGL + G ++ A+ I  
Sbjct: 281 NVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILD 340

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            M++ GF+ D    NSL+ GLC K  E    +E+A ++  +M  +    +  TY  +I T
Sbjct: 341 VMLQEGFDPDIFTYNSLIFGLC-KLGE----VEEAVEILNQMILRDFSPNTVTYNTLIST 395

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           L K  + +EA          G +P   TFN++IQ LC       A+ L   M      P 
Sbjct: 396 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPD 455

Query: 440 RTSYDMLITKL 450
             +Y+MLI  L
Sbjct: 456 EFTYNMLIDSL 466


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 206/431 (47%), Gaps = 40/431 (9%)

Query: 55  QRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY 114
           +R  + I    + + ID+F+S+ +     +  DFN L  A+    + +  + F       
Sbjct: 69  ERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 128

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+  + +T +IMI CYC K     A  V+   +  GY P+  TF+ LVN  C  GR+ EA
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 188

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD---------- 224
           + ++D+M  +  +P++ T + L+ GLC  GRV EA  ++  +   G +PD          
Sbjct: 189 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 248

Query: 225 -------------------------VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
                                    V  Y+ V+D  CK G  ++A+ L NE   +G+  +
Sbjct: 249 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 308

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VVT+++L  G C +G    G  +L+ M  RN +PD +++S L++  +K GK+  A  ++ 
Sbjct: 309 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 368

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM+  G   D    NSL+ G C     +++ L +A Q+F+ M  K    D  TY I+I +
Sbjct: 369 EMITRGIAPDTITYNSLIDGFC-----KENCLHEANQMFDLMVSKGCEPDIVTYSILINS 423

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
             K K+ D+ +         G IP TIT+N ++   C  GK++ A  L   M      PS
Sbjct: 424 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 483

Query: 440 RTSYDMLITKL 450
             +Y +L+  L
Sbjct: 484 VVTYGILLDGL 494



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 187/384 (48%), Gaps = 7/384 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  L +      A+        YG  P+  T+  ++   C   +   A  +   M +  
Sbjct: 210 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 269

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +V  ++I+++SLCK G   +AL + ++M   G K ++ TY+ L+ GLC  G+ ++  
Sbjct: 270 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 329

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           +ML  +    + PDV T++A++D F K G+  EA EL NE I RG+ P+ +T+N+L +G+
Sbjct: 330 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 389

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CKE    +   +  LM  + C PD ++YS L+N   K  ++   + +F+E+   G   + 
Sbjct: 390 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 449

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N+L+ G C     +   L  A ++F++M  +       TYGI++  L    + ++AL
Sbjct: 450 ITYNTLVLGFC-----QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 504

Query: 391 IHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
             +   ++   +   I  +N +I  +C   K+D A  L   + +    P   +Y+++I  
Sbjct: 505 -EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 563

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
           L +     +A  L+    + G  P
Sbjct: 564 LCKKGSLSEADMLFRKMKEDGCTP 587



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 168/344 (48%), Gaps = 5/344 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+  F +     +  +   +SI+I   C    F +A  + + M   G   +V T++ L+ 
Sbjct: 258 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 317

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LC  G+  +  ++L +M      P++ T++ L+      G++ EA E+   +   G+ P
Sbjct: 318 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 377

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D  TY +++DGFCK    +EA ++ +  + +G  P++VT++ L N YCK      G+ L 
Sbjct: 378 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 437

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           + +  +  +P+ I+Y+TL+ G  + GK+  A  +F+EMV  G          LL GLC  
Sbjct: 438 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC-- 495

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   L  A ++FEKM K       G Y I+I  +    K D+A        + G  P
Sbjct: 496 ---DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 552

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             +T+N +I  LC +G + +A +L   M E    P   +Y++LI
Sbjct: 553 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 180/359 (50%), Gaps = 6/359 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D+F  +++     SV  ++ ++ +L      + A+  F+E    G+  +  T+S +I  
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            CN   + +  K++  M      P+V TF+ L++   K G+L EA E+ ++M   G  P+
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L+ G C    + EA +M   + + G +PD+ TY+ +++ +CK  R ++ M L  
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 438

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E   +G+ PN +T+NTL  G+C+ G       L + M  R   P  ++Y  LL+GL   G
Sbjct: 439 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 498

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A+ IF++M +    +   + N ++ G+C  S      ++DA+ +F  ++ K    D
Sbjct: 499 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK-----VDDAWSLFCSLSDKGVKPD 553

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA-LCGEGKIDKALLL 427
             TY ++I  L K     EA +      E G  P   T+N +I+A L G G I    L+
Sbjct: 554 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELI 612



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 191/412 (46%), Gaps = 20/412 (4%)

Query: 24  PQFNKLVVFAAASLSTAESLDL--KENPRSLQAQRF-----VDRI-KASPLKERIDIFDS 75
           P  N+L      S ++A +LDL  K   R+++A        +D + K     + + +F+ 
Sbjct: 244 PVLNRL----CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 299

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++  G    V  ++ L+  L    + +   K   E     + P+  TFS +I  +  +  
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 359

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA+++ + M   G  P+  T+  L++  CK   L EA ++ D M   GC+P+I TY+ 
Sbjct: 360 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 419

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+   C   RV++   +   + + GL P+  TY  ++ GFC+ G+ N A EL  E + RG
Sbjct: 420 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 479

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           V P+VVT+  L +G C  G   K + + + M+K         Y+ +++G+    K+  A 
Sbjct: 480 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 539

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           S+F  +   G + D    N ++ GLC K S  E D+L      F KM +     D  TY 
Sbjct: 540 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML------FRKMKEDGCTPDDFTYN 593

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           I+IR    G     ++  +      G    + T   VI  L  + ++DK+ L
Sbjct: 594 ILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLDKSFL 644



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 151/305 (49%), Gaps = 7/305 (2%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           ++ +A+++ + M +    P    +N L   +    + +        ++ +G++ D+YT T
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++ +C+  +   A  +L  A + G  P+ +TF+TL NG+C EG   + V L+  M + 
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD ++ STL+NGL   G++  A+ +   MV +GF+ DE     +L  LC KS     
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC-KSGNSA- 256

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITF 408
           L  D ++  E+   K SV     Y IVI +L K    D+AL  L + +EM  I    +T+
Sbjct: 257 LALDLFRKMEERNIKASVVQ---YSIVIDSLCKDGSFDDAL-SLFNEMEMKGIKADVVTY 312

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           +++I  LC +GK D    +L  M     IP   ++  LI    +  K  +A  LY   + 
Sbjct: 313 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 372

Query: 469 QGVIP 473
           +G+ P
Sbjct: 373 RGIAP 377


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 203/388 (52%), Gaps = 6/388 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
             S+ + G   +V  +N L+ AL      E AV    +    G APN+ T++ ++  +C 
Sbjct: 140 LSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCR 199

Query: 133 KNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             +   A +V+  M + G   PN+ TF  +VN LCK+GR++ A +V D+M R G  P++ 
Sbjct: 200 AGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVV 259

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           +YN LL G C VG + E+  +   +   GL PDV T+T+++   CK G   +A+ L+ + 
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 319

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            ERG+  N VTF  L +G+CK+G     +  ++ M+K    P  + Y+ L+NG  K G++
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  + +EM     + D    ++++ G C     +   L+ A+Q+ +KM KK  + D  
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYC-----KVGNLDSAFQLNQKMLKKGVLPDAI 434

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +IR L + K+ ++A     + +++G  P   T+  +I   C EG ++KAL L   M
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDA 459
                +P   +Y +LI  L +  ++ +A
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEA 522



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 177/337 (52%), Gaps = 8/337 (2%)

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           AR+ +  M  +G  PNV T+ ILV +LC  GRL+EA+ V+  M   GC PN  TYN L+ 
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195

Query: 199 GLCYVGRVEEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
             C  G ++ A  ++  ++ +G  KP++ T+ ++++G CK GR   A ++ +E +  G+ 
Sbjct: 196 AFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLA 255

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+VV++NTL +GYCK G   + + +   M +R  +PD +++++L++   K G +  AV++
Sbjct: 256 PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL 315

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             +M   G  ++E    +L+ G C     +K  L+DA    E+M K         Y  +I
Sbjct: 316 VAQMRERGLRMNEVTFTALIDGFC-----KKGFLDDALLAVEEMRKCGIQPSVVCYNALI 370

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
               K  + D A   L   +E   + P  +T++ +I   C  G +D A  L   M +   
Sbjct: 371 NGYCKLGRMDLAR-ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +P   +Y  LI  L + ++  DAC L+   L+ GV P
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 182/344 (52%), Gaps = 12/344 (3%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN ++  L      E A K F E    GLAP+  +++ ++  YC      E+  V   M 
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 285

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V TFT L+++ CK+G L++A+ ++ QM   G + N  T+  L+ G C  G ++
Sbjct: 286 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 345

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A   +  ++  G++P V  Y A+++G+CK+GR + A EL+ E   + V P+VVT++T+ 
Sbjct: 346 DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTII 405

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +GYCK G       L + M K+  LPD I+YS+L+ GL +  ++  A  +F+ M++ G +
Sbjct: 406 SGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 465

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            DE    +L+ G C +   EK     A  + ++M +K  + D  TY ++I  L K  +T 
Sbjct: 466 PDEFTYTTLIDGHCKEGNVEK-----ALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520

Query: 388 EA---LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           EA   L  L+H      +P  I + + +   C + +    + LL
Sbjct: 521 EAHRLLFKLYHE---DPVPDNIKY-DALMLCCSKAEFKSVVALL 560



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 195/413 (47%), Gaps = 55/413 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++    +FD + ++G    V  +N LL     +     ++  FSE +  GL P+  
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C   +  +A  ++  M + G   N  TFT L++  CK G L +AL  +++M
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG-- 239
            + G +P++  YN L+ G C +GR++ A E++  ++   +KPDV TY+ ++ G+CKVG  
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 240 ---------------------------------RSNEAMELLNEAIERGVTPNVVTFNTL 266
                                            R N+A EL    ++ GV P+  T+ TL
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF-----KEM 321
            +G+CKEG   K + L   M ++  LPD ++YS L+NGL K  + + A  +      ++ 
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534

Query: 322 VRFGFEVDERMMN----------SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           V    + D  M+           +LL+G CMK      L+++A +V++ M  +    D  
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG-----LMKEADKVYQSMLDRNWKLDGS 589

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            Y I+I    +G    +AL      +  G  P + +  ++++ L  EG + +A
Sbjct: 590 VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 131/264 (49%), Gaps = 7/264 (2%)

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  P++  YN +L  L     +  A   L ++   G+ P+VYTY  ++   C  GR  EA
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLN 303
           + ++ +    G  PN VT+NTL   +C+ G       ++ LM++  N  P+ +++++++N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL K G++  A  +F EMVR G   D    N+LL G C     +   L ++  VF +MT+
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC-----KVGCLHESLAVFSEMTQ 286

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           +  V D  T+  +I    K    ++A+  +    E G     +TF  +I   C +G +D 
Sbjct: 287 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD 346

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLI 447
           ALL +  M +    PS   Y+ LI
Sbjct: 347 ALLAVEEMRKCGIQPSVVCYNALI 370



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 113/223 (50%), Gaps = 15/223 (6%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+ P++ T+S +IR  C +    +A ++ + M   G  P+  T+T L++  CK G +++A
Sbjct: 428 GVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKA 487

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM----------NVKNDGL--- 221
           L + D+M R G  P++ TY+ L+ GL    R +EA+ +L           N+K D L   
Sbjct: 488 LSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLC 547

Query: 222 --KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
             K +  +  A++ GFC  G   EA ++    ++R    +   ++ L +G+C+ G   K 
Sbjct: 548 CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKA 607

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           +   K M +    P+  S  +L+ GL + G +  A +  ++++
Sbjct: 608 LSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 202/408 (49%), Gaps = 6/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   + D +   G    +  +N ++  L    + E A  +  E    GL P++ TF  
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 459

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            I  Y       EA K  D M D+G  PN   +T+L+N   K+G L EAL +   +  +G
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++QT +  + GL   GRV+EA ++   +K  GL PDV+TY++++ GFCK G   +A 
Sbjct: 520 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 579

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           EL +E   +G+ PN+  +N L +G CK G   +   L   M ++   PD ++YST+++G 
Sbjct: 580 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 639

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K   +  A S+F EM   G +    + N+L+ G C    +E D +E A  +F +M +K 
Sbjct: 640 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCC----KEGD-MEKAMNLFREMLQKG 694

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
             T   ++  +I    K  K  EA       I    +P  +T+  VI   C  GK+++A 
Sbjct: 695 FATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 753

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LL   M E   I    +Y  L+   ++L +S +  AL+   + +GV P
Sbjct: 754 LLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKP 801



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 196/414 (47%), Gaps = 6/414 (1%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
             KA  L E + IF  +   G    V   +  +  L+     + A+K FSE    GL P+
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            +T+S +I  +C + +  +A ++ D M   G  PN+  +  LV+ LCKSG ++ A ++ D
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M   G +P+  TY+ ++ G C    V EA+ +   + + G++P  + Y A++ G CK G
Sbjct: 619 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 678

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
              +AM L  E +++G     ++FNTL +GYCK     +   L + M  +  +PD ++Y+
Sbjct: 679 DMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 737

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           T+++   K GK+  A  +FKEM      VD     SL+ G     + +     + + +FE
Sbjct: 738 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYG-----YNKLGQSSEVFALFE 792

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           KM  K    D  TYG+VI    K     EA       +  G + +    + +I ALC   
Sbjct: 793 KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 852

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            + +A  LL  M E    PS  +   L+    +  K  +A  ++      G++P
Sbjct: 853 DLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVP 906



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 193/415 (46%), Gaps = 7/415 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   + E + I D +   G   ++  +N L+  L    + E A +      + G  PNS
Sbjct: 255 MREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNS 314

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF ++I  YC +++   A +++D M      P+  ++  ++N LC    L  A ++L++
Sbjct: 315 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 374

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G KPN+  Y+ L+ G    GR+EEA  +L  +   G+ PD++ Y A++    K G+
Sbjct: 375 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 434

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA   L E   RG+ P+ VTF     GY K G   +       M     +P+   Y+ 
Sbjct: 435 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 494

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NG  K G +  A+SIF+ +   G   D +  ++ + GL      +   +++A +VF +
Sbjct: 495 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLL-----KNGRVQEALKVFSE 549

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-GHIPRTITFNNVIQALCGEG 419
           + +K  V D  TY  +I    K  + ++A   LH  + + G  P    +N ++  LC  G
Sbjct: 550 LKEKGLVPDVFTYSSLISGFCKQGEVEKAF-ELHDEMCLKGIAPNIFIYNALVDGLCKSG 608

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            I +A  L   M E    P   +Y  +I    + E   +A +L+     +GV P 
Sbjct: 609 DIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 663



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 184/402 (45%), Gaps = 31/402 (7%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++   E     L P++ ++  MI   C+  D   A K+++ M  +G  PNV  ++ L+ 
Sbjct: 333 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIM 392

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
                GR++EA  +LD M   G  P+I  YN ++  L   G++EEA   L+ ++  GLKP
Sbjct: 393 GYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 452

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D  T+ A + G+ K G+  EA +  +E ++ G+ PN   +  L NG+ K G  M+ + + 
Sbjct: 453 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 512

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           + +     LPD  + S  ++GLLK G+++ A+ +F E+   G   D    +SL+ G C +
Sbjct: 513 RHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 572

Query: 344 SWEEKDL------------------------------LEDAYQVFEKMTKKVSVTDPGTY 373
              EK                                ++ A ++F+ M +K    D  TY
Sbjct: 573 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 632

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             +I    K +   EA    H     G  P +  +N ++   C EG ++KA+ L   M +
Sbjct: 633 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 692

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
                +  S++ LI    +  K  +A  L+   + + ++P  
Sbjct: 693 KG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDH 733



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 175/369 (47%), Gaps = 11/369 (2%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F E    GL P+    S +I  +  + D  E  ++ D M   G   N+ T+ +L++ LCK
Sbjct: 232 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 291

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G++++A E+L  M  +GCKPN +T+  L++G C    +  A E+L  ++   L P   +
Sbjct: 292 FGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 351

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y A+++G C     + A +LL +    G+ PNVV ++TL  GY  EG   +   LL  M 
Sbjct: 352 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 411

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
                PD   Y+ +++ L K GK+  A +   E+   G + D     + + G     + +
Sbjct: 412 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG-----YSK 466

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
              + +A + F++M     + +   Y ++I    K     EAL    H   +G +P   T
Sbjct: 467 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQT 526

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT---KLDQLEKSYDACALYG 464
            +  I  L   G++ +AL +   + E   +P   +Y  LI+   K  ++EK+++   L+ 
Sbjct: 527 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE---LHD 583

Query: 465 AALKQGVIP 473
               +G+ P
Sbjct: 584 EMCLKGIAP 592



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 166/363 (45%), Gaps = 16/363 (4%)

Query: 111 ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR 170
           A+ + +A N      +IRC             +  M + G  PN  T+TI+   LC++ R
Sbjct: 176 ANVFFVAKNDSILISLIRC-----------NSLRSMGEKGLVPNTYTYTIITAGLCRAKR 224

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           + EA    ++M + G KP+    + L+ G    G ++E   +   + + G+  ++ TY  
Sbjct: 225 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 284

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++ G CK G+  +A E+L   I  G  PN  TF  L  GYC+E    + + LL  M+KRN
Sbjct: 285 LIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 344

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
            +P  +SY  ++NGL     +  A  + ++M   G + +  + ++L+ G     +  +  
Sbjct: 345 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMG-----YASEGR 399

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           +E+A ++ + M+      D   Y  +I  L K  K +EA  +L      G  P  +TF  
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 459

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
            I      GK+ +A      M +H  +P+   Y +LI    +     +A +++      G
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519

Query: 471 VIP 473
           V+P
Sbjct: 520 VLP 522



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 2/292 (0%)

Query: 49  PRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+     +D   K+  + E   +F  +   G       +N L+       + E A+  
Sbjct: 627 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 686

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F E    G A  + +F+ +I  YC      EA ++   M      P+  T+T +++  CK
Sbjct: 687 FREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 745

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G+++EA  +  +M       +  TY  L+ G   +G+  E + +   +   G+KPD  T
Sbjct: 746 AGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVT 805

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  V+   CK     EA +L +E + +G+       + L    CK     +   LL  M 
Sbjct: 806 YGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMG 865

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           +    P   + STL+    + GK+  A  +F+ +   G   D   +  L+ G
Sbjct: 866 ELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 93/191 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++E   +F  +++         +  L+     L +       F +  + G+ P+  
Sbjct: 745 KAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 804

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ ++I  +C +++  EA K+ D +   G     T   +L+ +LCK   L EA ++LD+M
Sbjct: 805 TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 864

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           G +G KP++   + L++     G+++EA  +   VK+ GL PD  T   +++G      S
Sbjct: 865 GELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDS 924

Query: 242 NEAMELLNEAI 252
            +A  L+ + +
Sbjct: 925 EDARNLIKQLV 935



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 117/261 (44%), Gaps = 1/261 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++ +++F  + + G   ++S FN L+       + + A + F E  +  + P+  
Sbjct: 676 KEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 734

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C      EA  +   M +     +  T+T L+    K G+  E   + ++M
Sbjct: 735 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM 794

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP+  TY  ++   C    + EA+++   V   G+      +  ++   CK    
Sbjct: 795 VAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDL 854

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +LL+E  E G+ P++   +TL   + + G   +   + + +K    +PD  +   L
Sbjct: 855 TEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDL 914

Query: 302 LNGLLKWGKIRPAVSIFKEMV 322
           +NG L       A ++ K++V
Sbjct: 915 VNGNLNDTDSEDARNLIKQLV 935


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 213/410 (51%), Gaps = 31/410 (7%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   SV  +N +L+AL   +   +A +FF    S G+APN +T++I++R  C +    EA
Sbjct: 118 GYAPSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             V+  M   G  PN  T+  LV + C++G +  A  ++D M   G KPN+ T+N ++ G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           +C  GR+E+A ++   +  +GL PD  +Y  ++ G+CKVG S+EA+ +  E   +G+ P+
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VVTF +L +  CK G   + VGL++ M++R    ++I+++ L++G  K G +  A+   +
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 320 EMVRFGFEVDERMMNSLLRGLCM-----------KSWEEKDLLED--------------- 353
           EM +   +      N+L+ G CM           +  E K +  D               
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 354 ----AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
               A+Q+ ++M +   + D  TY  +IR L + K+  +A +   + I +G  P  +T+ 
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           ++I   C EG +++AL L   M +   +P   +Y +LI  L +  ++ +A
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEA 526



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 186/360 (51%), Gaps = 12/360 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D +++ G   ++  FN ++  +      E A K F E    GLAP+  +++ ++  YC
Sbjct: 214 LVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYC 273

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA  V   M   G  P+V TFT L++ +CK+G L+ A+ ++ +M   G + N  
Sbjct: 274 KVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEI 333

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+  L+ G C  G +++A   +  ++   ++P V  Y A+++G+C VGR +EA EL+ E 
Sbjct: 334 TFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM 393

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             +GV P+VVT++T+ + YCK G       L + M +   LPD I+YS+L+  L +  ++
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRL 453

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +FK M+  G + DE    SL+ G C +   E+     A  + ++M K   + D  
Sbjct: 454 GDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVER-----ALSLHDEMVKAGVLPDVV 508

Query: 372 TYGIVIRTLGKGKKTDEA---LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           TY ++I  L K  +T EA   L  L+H      +P  I ++ +++  C   ++   L LL
Sbjct: 509 TYSVLINGLSKSARTKEAQRLLFKLYHE---EPVPANIKYDALMRC-CRNAELKSVLALL 564



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 173/392 (44%), Gaps = 55/392 (14%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+  + +   +++ G   +   F  L+         + A+    E     + P+  
Sbjct: 309 KAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVV 368

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  YC      EAR+++  M   G  P+V T++ ++++ CK+G    A ++  QM
Sbjct: 369 CYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQM 428

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TY+ L++ LC   R+ +A+ +  N+ + GL+PD  TYT+++DG CK G  
Sbjct: 429 LENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNV 488

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNG-----------------YCKEGTP-------- 276
             A+ L +E ++ GV P+VVT++ L NG                 Y +E  P        
Sbjct: 489 ERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDAL 548

Query: 277 ---------------MKGVGLLKLMKK----------RNCLPDKISYSTLLNGLLKWGKI 311
                          +KG  +  LM +          RN   D   YS L++G  + G +
Sbjct: 549 MRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNV 608

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+S  K+M++ GF  +     SL+RGL      EK ++ +A QV +++    S+ D  
Sbjct: 609 MKALSFHKQMLQCGFAPNSTSTISLIRGL-----FEKGMVVEADQVIQQLLNCCSLADAE 663

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
               +I    K    D  L  LH     G +P
Sbjct: 664 ASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 67/134 (50%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++ +C K    EA KV   + D  ++ + + +++L++  C+ G + +AL    QM + G
Sbjct: 563 LLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCG 622

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  +   L++GL   G V EA +++  + N     D     A++D   K G  +  +
Sbjct: 623 FAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVL 682

Query: 246 ELLNEAIERGVTPN 259
           ++L+     G+ P+
Sbjct: 683 DVLHGMARDGLLPS 696


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 206/431 (47%), Gaps = 40/431 (9%)

Query: 55  QRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY 114
           +R  + I    + + ID+F+S+ +     +  DFN L  A+    + +  + F       
Sbjct: 40  ERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 99

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+  + +T +IMI CYC K     A  V+   +  GY P+  TF+ LVN  C  GR+ EA
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD---------- 224
           + ++D+M  +  +P++ T + L+ GLC  GRV EA  ++  +   G +PD          
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219

Query: 225 -------------------------VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
                                    V  Y+ V+D  CK G  ++A+ L NE   +G+  +
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VVT+++L  G C +G    G  +L+ M  RN +PD +++S L++  +K GK+  A  ++ 
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM+  G   D    NSL+ G C     +++ L +A Q+F+ M  K    D  TY I+I +
Sbjct: 340 EMITRGIAPDTITYNSLIDGFC-----KENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
             K K+ D+ +         G IP TIT+N ++   C  GK++ A  L   M      PS
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454

Query: 440 RTSYDMLITKL 450
             +Y +L+  L
Sbjct: 455 VVTYGILLDGL 465



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 187/385 (48%), Gaps = 7/385 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  L +      A+        YG  P+  T+  ++   C   +   A  +   M +  
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +V  ++I+++SLCK G   +AL + ++M   G K ++ TY+ L+ GLC  G+ ++  
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           +ML  +    + PDV T++A++D F K G+  EA EL NE I RG+ P+ +T+N+L +G+
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CKE    +   +  LM  + C PD ++YS L+N   K  ++   + +F+E+   G   + 
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N+L+ G C     +   L  A ++F++M  +       TYGI++  L    + ++AL
Sbjct: 421 ITYNTLVLGFC-----QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475

Query: 391 IHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
             +   ++   +   I  +N +I  +C   K+D A  L   + +    P   +Y+++I  
Sbjct: 476 -EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534

Query: 450 LDQLEKSYDACALYGAALKQGVIPQ 474
           L +     +A  L+    + G  P 
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPD 559



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 168/344 (48%), Gaps = 5/344 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+  F +     +  +   +SI+I   C    F +A  + + M   G   +V T++ L+ 
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LC  G+  +  ++L +M      P++ T++ L+      G++ EA E+   +   G+ P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D  TY +++DGFCK    +EA ++ +  + +G  P++VT++ L N YCK      G+ L 
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           + +  +  +P+ I+Y+TL+ G  + GK+  A  +F+EMV  G          LL GLC  
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC-- 466

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   L  A ++FEKM K       G Y I+I  +    K D+A        + G  P
Sbjct: 467 ---DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             +T+N +I  LC +G + +A +L   M E    P   +Y++LI
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 180/359 (50%), Gaps = 6/359 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D+F  +++     SV  ++ ++ +L      + A+  F+E    G+  +  T+S +I  
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            CN   + +  K++  M      P+V TF+ L++   K G+L EA E+ ++M   G  P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L+ G C    + EA +M   + + G +PD+ TY+ +++ +CK  R ++ M L  
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E   +G+ PN +T+NTL  G+C+ G       L + M  R   P  ++Y  LL+GL   G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A+ IF++M +    +   + N ++ G+C  S      ++DA+ +F  ++ K    D
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK-----VDDAWSLFCSLSDKGVKPD 524

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA-LCGEGKIDKALLL 427
             TY ++I  L K     EA +      E G  P   T+N +I+A L G G I    L+
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELI 583



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 191/412 (46%), Gaps = 20/412 (4%)

Query: 24  PQFNKLVVFAAASLSTAESLDL--KENPRSLQAQRF-----VDRI-KASPLKERIDIFDS 75
           P  N+L      S ++A +LDL  K   R+++A        +D + K     + + +F+ 
Sbjct: 215 PVLNRL----CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++  G    V  ++ L+  L    + +   K   E     + P+  TFS +I  +  +  
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA+++ + M   G  P+  T+  L++  CK   L EA ++ D M   GC+P+I TY+ 
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+   C   RV++   +   + + GL P+  TY  ++ GFC+ G+ N A EL  E + RG
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           V P+VVT+  L +G C  G   K + + + M+K         Y+ +++G+    K+  A 
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           S+F  +   G + D    N ++ GLC K S  E D+L      F KM +     D  TY 
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML------FRKMKEDGCTPDDFTYN 564

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           I+IR    G     ++  +      G    + T   VI  L  + ++DK+ L
Sbjct: 565 ILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLDKSFL 615



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 151/306 (49%), Gaps = 7/306 (2%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           ++ +A+++ + M +    P    +N L   +    + +        ++ +G++ D+YT T
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++ +C+  +   A  +L  A + G  P+ +TF+TL NG+C EG   + V L+  M + 
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD ++ STL+NGL   G++  A+ +   MV +GF+ DE     +L  LC KS     
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC-KSGNSA- 227

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITF 408
           L  D ++  E+   K SV     Y IVI +L K    D+AL  L + +EM  I    +T+
Sbjct: 228 LALDLFRKMEERNIKASVVQ---YSIVIDSLCKDGSFDDAL-SLFNEMEMKGIKADVVTY 283

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           +++I  LC +GK D    +L  M     IP   ++  LI    +  K  +A  LY   + 
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343

Query: 469 QGVIPQ 474
           +G+ P 
Sbjct: 344 RGIAPD 349


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 188/337 (55%), Gaps = 7/337 (2%)

Query: 116 LAPNSWTFSIMIRCYC--NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           + P+ +T +I+I C+C  N + F  A  V+  MF  G  PN  TF+ L+N L    ++ +
Sbjct: 6   IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A+++ D+M ++G +P++ TY+ ++ GLC +G    A ++L  ++  G KP+V  Y+ ++D
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             CK     EAME L+E + RG++PNVVT++++ +G+C  G   +   L K M +RN +P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D ++++ L++GL K G I  A  +F+ M+  G E +    N+L+ G C +S      +++
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQ-----MDE 240

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A ++F  M +K       +Y I+I+   K  + DEA   L         P T+T++ +++
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             C +G+   A  LL  M  +  +P   +Y +++  L
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGL 337



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 187/359 (52%), Gaps = 5/359 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL PN  TFS ++    +K    +A K+ D M   GY P+V T++ ++N LCK G    A
Sbjct: 42  GLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMA 101

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           +++L +M   GCKPN+  Y+ ++  LC    + EA E L  + N G+ P+V TY++++ G
Sbjct: 102 IQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHG 161

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           FC +GRSNEA  L  + +ER V P+ VTFN L +G  KEG  ++   + + M ++   P+
Sbjct: 162 FCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPN 221

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
             +Y+ L++G     ++  A  +F  MVR G     R  N L++G C KS      +++A
Sbjct: 222 VNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHC-KSGR----IDEA 276

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
             +  +M+ K    D  TY  +++   +  +  +A   L      G +P  +T++ V+  
Sbjct: 277 KGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDG 336

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LC +G +D+A  LL  M E    P+   Y +LI  +    K   A  L+     +G+ P
Sbjct: 337 LCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQP 395



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 180/367 (49%), Gaps = 9/367 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++F SE  + G++PN  T+S ++  +CN     EA  +   M +    P+  TF ILV+
Sbjct: 136 AMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVD 195

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            L K G + EA  V + M   G +PN+ TYN L+ G C   +++EA ++   +   G  P
Sbjct: 196 GLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAP 255

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            V +Y  ++ G CK GR +EA  LL E   + +TP+ VT++TL  G+C++G P     LL
Sbjct: 256 SVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLL 315

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           + M+    LPD ++YS +L+GL K G +  A  + K M     E +  +   L++G+C  
Sbjct: 316 EEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNF 375

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                  LE A ++F  +  K    D  TY ++I  L KG  ++EA          G +P
Sbjct: 376 GK-----LEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLP 430

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            + T+N +IQ     G    A  L+  M         +++ M    L  LE   +  +L+
Sbjct: 431 NSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQM----LSDLESRDEIISLF 486

Query: 464 GAALKQG 470
                QG
Sbjct: 487 MHGSSQG 493



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 183/380 (48%), Gaps = 5/380 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +FD + K G    V  ++ ++  L  +     A++   +    G  PN   +S +I
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C      EA + +  M + G  PNV T++ +++  C  GR  EA  +  QM      
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  T+N L+ GL   G + EA  +   +   G++P+V TY A+MDG+C   + +EA +L
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            N  + +G  P+V ++N L  G+CK G   +  GLL  M  +   PD ++YSTL+ G  +
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G+ + A  + +EM  +G   D    + +L GLC +       L++A+++ + M +    
Sbjct: 305 DGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH-----LDEAFELLKAMQESKIE 359

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            +   Y I+I+ +    K + A     +    G  P  +T+  +I  L   G  ++A  L
Sbjct: 360 PNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACEL 419

Query: 428 LFLMYEHAKIPSRTSYDMLI 447
              M  H  +P+  +Y+++I
Sbjct: 420 FRDMAVHGCLPNSCTYNVII 439



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 163/324 (50%), Gaps = 5/324 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E ++    +   G + +V  ++ +L     L     A   F +     + P++ TF+I
Sbjct: 133 ITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNI 192

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++     +    EA+ V + M + G  PNV T+  L++  C   ++ EA ++ + M R G
Sbjct: 193 LVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG 252

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P++++YN L+KG C  GR++EA  +L  + +  L PD  TY+ +M GFC+ GR  +A 
Sbjct: 253 CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQ 312

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +LL E    G+ P+++T++ + +G CK+G   +   LLK M++    P+   Y+ L+ G+
Sbjct: 313 KLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGM 372

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
             +GK+  A  +F  +   G + D      ++ GL      +  L  +A ++F  M    
Sbjct: 373 CNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLL-----KGGLSNEACELFRDMAVHG 427

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEA 389
            + +  TY ++I+   +   T  A
Sbjct: 428 CLPNSCTYNVIIQGFLRNGDTSNA 451



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 123/238 (51%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E   +F+ + + G   SV  +N L+         + A    +E S   L P++ T+
Sbjct: 236 SQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTY 295

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           S +++ +C      +A+K+++ M   G  P++ T++I+++ LCK G L EA E+L  M  
Sbjct: 296 STLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQE 355

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
              +PNI  Y  L++G+C  G++E A E+  N+   G++PDV TYT ++ G  K G SNE
Sbjct: 356 SKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNE 415

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           A EL  +    G  PN  T+N +  G+ + G       L++ M  R    D  ++  L
Sbjct: 416 ACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 52/125 (41%)

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
           D    A+ V   M K     +  T+  ++  L    K  +A+      ++MG+ P  IT+
Sbjct: 26  DHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITY 85

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           + +I  LC  G    A+ LL  M E    P+   Y  +I  L + +   +A       + 
Sbjct: 86  STIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVN 145

Query: 469 QGVIP 473
           +G+ P
Sbjct: 146 RGISP 150


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 203/408 (49%), Gaps = 6/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   + D +   G    +  +N ++  L    + E A  +  E    GL P++ TF  
Sbjct: 489 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 548

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            I  Y       EA K  D M D+G  PN   +T+L+N   K+G L EAL +  ++  +G
Sbjct: 549 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALG 608

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++QT +  + GL   GRV+EA ++   +K  GL PDV+TY++++ GFCK G   +A 
Sbjct: 609 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 668

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           EL +E   +G+ PN+  +N L +G CK G   +   L   M ++   PD ++YST+++G 
Sbjct: 669 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 728

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K   +  A S+F EM   G +    + N+L+ G C    +E D +E A  +F +M +K 
Sbjct: 729 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCC----KEGD-MEKAMNLFREMLQKG 783

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
             T   ++  +I    K  K  EA       I    +P  +T+  VI   C  GK+++A 
Sbjct: 784 FATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 842

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LL   M E   I    +Y  L+   ++L +S +  AL+   + +GV P
Sbjct: 843 LLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKP 890



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 197/414 (47%), Gaps = 6/414 (1%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
             KA  L E + IF  +   G    V   +  +  L+     + A+K FSE    GL P+
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            +T+S +I  +C + +  +A ++ D M   G  PN+  +  LV+ LCKSG ++ A ++ D
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M   G +P+  TY+ ++ G C    V EA+ +   + + G++P  + Y A++ G CK G
Sbjct: 708 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 767

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
              +AM L  E +++G     ++FNTL +GYCK     +   L + M  +  +PD ++Y+
Sbjct: 768 DMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 826

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           T+++   K GK+  A  +FKEM      VD     SL+ G     + +     + + +FE
Sbjct: 827 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYG-----YNKLGQSSEVFALFE 881

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           KM  K    D  TYG+VI    K     EA       +  G + +    + +I ALC   
Sbjct: 882 KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 941

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            + +A  LL  M E    PS  + + L+    +  K  +A  ++      G++P
Sbjct: 942 DLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVP 995



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 186/402 (46%), Gaps = 31/402 (7%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++   E     L P++ ++  MI   C+  D   A K+++ M  +G  PNV  ++IL+ 
Sbjct: 422 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIM 481

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +    GR++EA  +LD M   G  P+I  YN ++  L   G++EEA   L+ ++  GLKP
Sbjct: 482 AYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 541

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D  T+ A + G+ K G+  EA +  +E ++ G+ PN   +  L NG+ K G  M+ + + 
Sbjct: 542 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 601

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           + +     LPD  + S  ++GLLK G+++ A+ +F E+   G   D    +SL+ G C +
Sbjct: 602 RRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 661

Query: 344 SWEEKDL------------------------------LEDAYQVFEKMTKKVSVTDPGTY 373
              EK                                ++ A ++F+ M +K    D  TY
Sbjct: 662 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 721

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             +I    K +   EA    H     G  P +  +N ++   C EG ++KA+ L   M +
Sbjct: 722 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 781

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
                +  S++ LI    +  K  +A  L+   + + ++P  
Sbjct: 782 KG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDH 822



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 192/415 (46%), Gaps = 7/415 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   + E + I D +   G   ++  +N L+  L    + E A +      + G  PNS
Sbjct: 344 MREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNS 403

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF ++I  YC +++   A +++D M      P+  ++  ++N LC    L  A ++L++
Sbjct: 404 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 463

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G KPN+  Y+ L+      GR+EEA  +L  +   G+ PD++ Y A++    K G+
Sbjct: 464 MTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 523

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA   L E   RG+ P+ VTF     GY K G   +       M     +P+   Y+ 
Sbjct: 524 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 583

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NG  K G +  A+SIF+ +   G   D +  ++ + GL      +   +++A +VF +
Sbjct: 584 LINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLL-----KNGRVQEALKVFSE 638

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-GHIPRTITFNNVIQALCGEG 419
           + +K  V D  TY  +I    K  + ++A   LH  + + G  P    +N ++  LC  G
Sbjct: 639 LKEKGLVPDVFTYSSLISGFCKQGEVEKAF-ELHDEMCLKGIAPNIFIYNALVDGLCKSG 697

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            I +A  L   M E    P   +Y  +I    + E   +A +L+     +GV P 
Sbjct: 698 DIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 752



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 190/415 (45%), Gaps = 5/415 (1%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           D +K   ++    +++ +      + V  +  L+ AL    +   A +   E    GL P
Sbjct: 202 DLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNP 261

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N + +S++I   C   D  EA ++   M + G  PN  T+TI+   LC++ R+ EA    
Sbjct: 262 NEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTF 321

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           ++M + G KP+    + L+ G    G ++E   +   + + G+  ++ TY  ++ G CK 
Sbjct: 322 EEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKF 381

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G+  +A E+L   +  G  PN  TF  L  GYC+E    + + LL  M+KRN +P  +SY
Sbjct: 382 GKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSY 441

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
             ++NGL     +  A  + ++M   G +      N ++  + + ++  +  +E+A ++ 
Sbjct: 442 GAMINGLCHCKDLSLANKLLEKMTFSGLKP-----NVVVYSILIMAYASEGRIEEARRLL 496

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           + M+      D   Y  +I  L K  K +EA  +L      G  P  +TF   I      
Sbjct: 497 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 556

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           GK+ +A      M +H  +P+   Y +LI    +     +A +++      GV+P
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLP 611



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 142/311 (45%), Gaps = 6/311 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  ++    +FD + + G       ++ ++           A   F E  S G+ P+S+
Sbjct: 695 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 754

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ ++   C + D  +A  +   M   G+   ++ F  L++  CKS +++EA ++  +M
Sbjct: 755 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEM 813

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P+  TY  ++   C  G++EEA  +   ++   L  D  TYT++M G+ K+G+S
Sbjct: 814 IAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQS 873

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +E   L  + + +GV P+ VT+  +   +CKE   ++   L   +  +  L     +  L
Sbjct: 874 SEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLL 933

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  L K   +  A  +  EM   G +      N+L+R     S+ E   +++A +VFE +
Sbjct: 934 ITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVR-----SFHEAGKMDEATRVFEGV 988

Query: 362 TKKVSVTDPGT 372
                V D  T
Sbjct: 989 KSLGLVPDTTT 999



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 2/292 (0%)

Query: 49   PRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
            P S+     +D   K+  + E   +F  +   G       +N L+       + E A+  
Sbjct: 716  PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 775

Query: 108  FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            F E    G A  + +F+ +I  YC      EA ++   M      P+  T+T +++  CK
Sbjct: 776  FREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 834

Query: 168  SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            +G+++EA  +  +M       +  TY  L+ G   +G+  E + +   +   G+KPD  T
Sbjct: 835  AGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVT 894

Query: 228  YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
            Y  V+   CK     EA +L +E + +G+       + L    CK     +   LL  M 
Sbjct: 895  YGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMG 954

Query: 288  KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
            +    P   + +TL+    + GK+  A  +F+ +   G   D   +  L+ G
Sbjct: 955  ELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 93/191 (48%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            KA  ++E   +F  +++         +  L+     L +       F +  + G+ P+  
Sbjct: 834  KAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 893

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T+ ++I  +C +++  EA K+ D +   G     T   +L+ +LCK   L EA ++LD+M
Sbjct: 894  TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 953

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            G +G KP++   N L++     G+++EA  +   VK+ GL PD  T   +++G      S
Sbjct: 954  GELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDS 1013

Query: 242  NEAMELLNEAI 252
             +A  L+ + +
Sbjct: 1014 EDARNLIKQLV 1024



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 1/261 (0%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K   +++ +++F  + + G   ++S FN L+       + + A + F E  +  + P+  
Sbjct: 765  KEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 823

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T++ +I  +C      EA  +   M +     +  T+T L+    K G+  E   + ++M
Sbjct: 824  TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM 883

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               G KP+  TY  ++   C    + EA+++   V   G+      +  ++   CK    
Sbjct: 884  VAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDL 943

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             EA +LL+E  E G+ P++   NTL   + + G   +   + + +K    +PD  +   L
Sbjct: 944  TEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDL 1003

Query: 302  LNGLLKWGKIRPAVSIFKEMV 322
            +NG L       A ++ K++V
Sbjct: 1004 VNGNLNDTDSEDARNLIKQLV 1024



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/376 (22%), Positives = 146/376 (38%), Gaps = 44/376 (11%)

Query: 108 FSEASSYGLAPNSWTFSIM-------------IRCYCNKNDFFEARKVIDCMF----DNG 150
           FS+  S  L  N+W  +IM             IR   ++N   + ++++D  +      G
Sbjct: 43  FSQQISDFLKQNNWK-TIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMG 101

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI-------------------GCKPNIQ 191
               + +F+IL   LC S     A  VL QM R                    G  P + 
Sbjct: 102 VPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVV- 160

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            ++ L+     +G ++EA  +    KND +   +    +++    K G      ++ N  
Sbjct: 161 -FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGM 219

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           ++  +  +V T+  L    CK G       +L  M ++   P++  YS ++ G+ + G I
Sbjct: 220 LDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDI 279

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             AV + + M   G   +      +  GLC         + +A   FE+M K     D  
Sbjct: 280 DEAVELKRSMGEKGLVPNTYTYTIITAGLC-----RAKRMNEAKLTFEEMQKTGLKPDYN 334

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
               +I    +    DE L      +  G     IT+N +I  LC  GK++KA  +L  M
Sbjct: 335 ACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGM 394

Query: 432 YEHAKIPSRTSYDMLI 447
                 P+  ++ +LI
Sbjct: 395 VTLGCKPNSRTFCLLI 410


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 197/382 (51%), Gaps = 5/382 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S++DF  LL+++  +    T +    +  S+G+ PN +T +I+I  +C+      A  V+
Sbjct: 58  SIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVL 117

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   G+ PN+ TF  L+  LC  G++ E L + D+M   G +PN+ TY  L+ GLC V
Sbjct: 118 AKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKV 177

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A  +L +++    +PDV  YT+++D  CK  +  +A  L +E I +G++P++ T+
Sbjct: 178 GSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTY 237

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L +  C          LL  M     +P+ + +ST+++ L K GK+  A  +   M++
Sbjct: 238 NSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIK 297

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E +    N+L+ G C++S      +++A +VF+ M  K    D  +Y  +I    K 
Sbjct: 298 RGVEPNVVTYNALMDGHCLRSE-----MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 352

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           ++ ++A+           IP T+T++ ++  LC  G++  A+ L   M    +IP   SY
Sbjct: 353 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 412

Query: 444 DMLITKLDQLEKSYDACALYGA 465
            +L+  L +  +  +A AL  A
Sbjct: 413 CILLDYLCKNRRLDEAIALLKA 434



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 182/367 (49%), Gaps = 5/367 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K       I +  S+++      V  +  ++ +L    +   A   FSE    G++P+ +
Sbjct: 176 KVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIF 235

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   CN  ++     +++ M ++   PNV  F+ +V++LCK G++ EA +V+D M
Sbjct: 236 TYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 295

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G +PN+ TYN L+ G C    ++EA ++   +   G  PDV +Y+ +++G+CK+ R 
Sbjct: 296 IKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 355

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +AM L  E   + + PN VT++TL +G C  G     + L   M  R  +PD +SY  L
Sbjct: 356 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCIL 415

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+ L K  ++  A+++ K +     + D ++   ++ G+C ++ E    LE A  +F  +
Sbjct: 416 LDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMC-RAGE----LEAARDLFSNL 470

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           + K    +  TY I+I  L +     EA          G+ P   T+N + +      + 
Sbjct: 471 SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNET 530

Query: 422 DKALLLL 428
            + + LL
Sbjct: 531 LRGIQLL 537



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 184/381 (48%), Gaps = 5/381 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +FD +  +G   +V  +  L+  L  +     A++           P+   ++ 
Sbjct: 145 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 204

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A  +   M   G  P++ T+  L+++LC     K    +L++M    
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 264

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+  ++ ++  LC  G+V EA++++  +   G++P+V TY A+MDG C     +EA+
Sbjct: 265 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 324

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +  + +G  P+VV+++TL NGYCK     K + L + M ++  +P+ ++YSTL++GL
Sbjct: 325 KVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGL 384

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+++ A+++F EMV  G   D      LL  LC     +   L++A  + + +    
Sbjct: 385 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLC-----KNRRLDEAIALLKAIEGSN 439

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D   Y IVI  + +  + + A     +    G  P   T+  +I  LC +G + +A 
Sbjct: 440 MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEAS 499

Query: 426 LLLFLMYEHAKIPSRTSYDML 446
            L   M      P+  +Y+++
Sbjct: 500 KLFGEMKRKGYSPNGCTYNLI 520



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 162/351 (46%), Gaps = 30/351 (8%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  FT L+ S+ K       L +  QM   G  PNI T N L+   C++ R+  A+ +
Sbjct: 57  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +P++ T+  ++ G C  G+  E + L ++ I  G  PNVVT+ TL NG CK
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G+    + LL+ M++ NC PD + Y+++++ L K  ++  A ++F EM+  G       
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 333 MNSLLRGLC-MKSWEEKDLL-----------------------------EDAYQVFEKMT 362
            NSL+  LC +  W+    L                              +A+ V + M 
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           K+    +  TY  ++       + DEA+      +  G  P  ++++ +I   C   +I+
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           KA+ L   M     IP+  +Y  L+  L  + +  DA AL+   + +G IP
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIP 407



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 143/290 (49%), Gaps = 1/290 (0%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E ++ K  P  +     VD + K   + E  D+ D + K G   +V  +N L+    + +
Sbjct: 259 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRS 318

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           E + AVK F      G AP+  ++S +I  YC      +A  + + M      PN  T++
Sbjct: 319 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 378

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L++ LC  GRL++A+ +  +M   G  P+  +Y  LL  LC   R++EA  +L  ++  
Sbjct: 379 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 438

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            + PD+  YT V+DG C+ G    A +L +    +G+ PNV T+  + NG C++G   + 
Sbjct: 439 NMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEA 498

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
             L   MK++   P+  +Y+ +  G L+  +    + + +EM+  GF  D
Sbjct: 499 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSAD 548



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 127/244 (52%), Gaps = 1/244 (0%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E + +FD++   G    V  ++ L+     +   E A+  F E     L PN+ T+
Sbjct: 318 SEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTY 377

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           S ++   C+     +A  +   M   G  P+  ++ IL++ LCK+ RL EA+ +L  +  
Sbjct: 378 STLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEG 437

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P+IQ Y  ++ G+C  G +E A ++  N+ + GL P+V+TYT +++G C+ G   E
Sbjct: 438 SNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAE 497

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A +L  E   +G +PN  T+N +  G+ +    ++G+ LL+ M  R    D +S ST+L 
Sbjct: 498 ASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSAD-VSTSTVLV 556

Query: 304 GLLK 307
            +L 
Sbjct: 557 EMLS 560



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 139/302 (46%), Gaps = 11/302 (3%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           L +AL   ++M  +   P+I  +  LL  +  +        +   + + G+ P++YT   
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           +++ FC + R   A  +L + ++ G  PN+ TFNTL  G C EG   + + L   M    
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             P+ ++Y TL+NGL K G    A+ + + M +   + D  +  S++  LC     +   
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLC-----KDRQ 214

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           +  A+ +F +M  +       TY  +I  L    +       L+  +    +P  + F+ 
Sbjct: 215 VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 274

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI------TKLDQLEKSYDACALYG 464
           V+ ALC EGK+ +A  ++ +M +    P+  +Y+ L+      +++D+  K +D     G
Sbjct: 275 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 334

Query: 465 AA 466
            A
Sbjct: 335 FA 336



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 91/187 (48%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L  +   + A+  F E  + G  P+  ++ I++   C      EA  ++  + 
Sbjct: 377 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 436

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +   P++  +TI+++ +C++G L+ A ++   +   G  PN+ TY  ++ GLC  G + 
Sbjct: 437 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLA 496

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA ++   +K  G  P+  TY  +  GF +   +   ++LL E + RG + +V T   L 
Sbjct: 497 EASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 556

Query: 268 NGYCKEG 274
                +G
Sbjct: 557 EMLSDDG 563



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 82/188 (43%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ I +F  +   G       +  LL  L      + A+          + P+   ++I
Sbjct: 390 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTI 449

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C   +   AR +   +   G HPNV T+TI++N LC+ G L EA ++  +M R G
Sbjct: 450 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 509

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TYN + +G           ++L  +   G   DV T T +++     G      
Sbjct: 510 YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVK 569

Query: 246 ELLNEAIE 253
           ++L+E ++
Sbjct: 570 QILSEFLQ 577



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 55/119 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+   D+F ++   G + +V  +  ++  L        A K F E    G +PN  
Sbjct: 456 RAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGC 515

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T++++ R +   N+     +++  M   G+  +V+T T+LV  L   G  +   ++L +
Sbjct: 516 TYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 574


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 194/367 (52%), Gaps = 5/367 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV +F   L ++    +  T V   ++   +G+  N ++ +I+I C C  N    A  V+
Sbjct: 91  SVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVL 150

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             MF  G  P+  TF  L+N  C  G +KEA+ + ++M R G +P++ +Y+ ++ GLC  
Sbjct: 151 GKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKS 210

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A ++L  ++  G KP++  YT ++D  CK    N+AM+LL+E ++RG+ P+VVT+
Sbjct: 211 GNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTY 270

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           +T+ +G+C  G   +   L   M  RN +P+ ++++ L++GL K G +  A  +F+ M +
Sbjct: 271 STILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTK 330

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E +    N+L+ G C+ +      +++A +V + M  K       +Y I+I    K 
Sbjct: 331 KGAEPNAYTYNALMDGYCLNNQ-----MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR 385

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           ++ DEA   L    E    P T+T++ ++Q LC  G+  +AL L   M     +P   +Y
Sbjct: 386 RRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTY 445

Query: 444 DMLITKL 450
             L+  L
Sbjct: 446 STLLDGL 452



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 210/432 (48%), Gaps = 8/432 (1%)

Query: 45  LKENPRS--LQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
           L+ NPR   ++  RF+  I K       + + + +   G   +V   N L+  L  LN  
Sbjct: 84  LRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHV 143

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
             A+    +    G+ P++ TF+ +I   C + +  EA  + + M   G+ P+V +++ +
Sbjct: 144 VFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTV 203

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +N LCKSG    AL++L +M   GCKPN+  Y  ++  LC    V +A ++L  + + G+
Sbjct: 204 INGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGI 263

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PDV TY+ ++ GFC +G  NEA  L NE + R V PN VTF  L +G CKEG   +   
Sbjct: 264 PPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARC 323

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           + + M K+   P+  +Y+ L++G     ++  A  +   MV  G        N L+ G C
Sbjct: 324 VFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYC 383

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                ++  L++A  +  +M++K    D  TY  +++ L +  +  EAL         G 
Sbjct: 384 -----KRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGL 438

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           +P  +T++ ++  LC  G +D+AL LL  M E    P    Y++LI  +    K   A  
Sbjct: 439 LPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKE 498

Query: 462 LYGAALKQGVIP 473
           L+      G+ P
Sbjct: 499 LFSKLFADGIQP 510



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 176/344 (51%), Gaps = 5/344 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+   SE    G+ P+  T+S ++  +C+     EA  + + M      PN  TFTILV+
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK G + EA  V + M + G +PN  TYN L+ G C   +++EA ++L  + + G  P
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAP 370

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            V++Y  +++G+CK  R +EA  LL E  E+ +TP+ VT++TL  G C+ G P + + L 
Sbjct: 371 VVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLF 430

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           K M     LPD ++YSTLL+GL K G +  A+ + K M     E D  + N L+ G+ + 
Sbjct: 431 KEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIA 490

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                  LE A ++F K+          TY I+I+ L K   +DEA        + G +P
Sbjct: 491 GK-----LEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLP 545

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            + ++N +IQ          A+ L+  M         +++ ML+
Sbjct: 546 NSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 206/434 (47%), Gaps = 8/434 (1%)

Query: 30  VVFAAASLSTAESLDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDF 88
           VVFA + L     L ++  P ++     ++ R     +KE + +F+ + + G    V  +
Sbjct: 143 VVFAISVLGKMFKLGIQ--PDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISY 200

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           + ++  L        A++   +    G  PN   ++ +I   C      +A  ++  M D
Sbjct: 201 STVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVD 260

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G  P+V T++ +++  C  G L EA  + ++M      PN  T+  L+ GLC  G V E
Sbjct: 261 RGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSE 320

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +   +   G +P+ YTY A+MDG+C   + +EA ++L+  +++G  P V ++N L N
Sbjct: 321 ARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILIN 380

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           GYCK     +   LL  M ++   PD ++YSTL+ GL + G+ + A+++FKEM   G   
Sbjct: 381 GYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLP 440

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D    ++LL GLC         L++A ++ + M +     D   Y I+I  +    K + 
Sbjct: 441 DLMTYSTLLDGLCKHGH-----LDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEV 495

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A          G  P   T+  +I+ L  EG  D+A  L   M +   +P+  SY+++I 
Sbjct: 496 AKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQ 555

Query: 449 KLDQLEKSYDACAL 462
              Q + S  A  L
Sbjct: 556 GFLQNQDSSTAIRL 569



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 191/389 (49%), Gaps = 14/389 (3%)

Query: 11  IFTNTNRRNHN-KIPQFNKLVVFAAASLSTAESLDLKEN-------PRSLQAQRFVDRI- 61
           +F    RR H   +  ++ ++     S +T+ +L L          P  +     +D + 
Sbjct: 184 LFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLC 243

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + + + +D+   +   G    V  ++ +L     L     A   F+E     + PN+ 
Sbjct: 244 KDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTV 303

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I++   C +    EAR V + M   G  PN  T+  L++  C + ++ EA +VLD M
Sbjct: 304 TFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM 363

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P + +YN L+ G C   R++EA  +L+ +    L PD  TY+ +M G C+VGR 
Sbjct: 364 VDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRP 423

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA+ L  E    G+ P+++T++TL +G CK G   + + LLK M++    PD + Y+ L
Sbjct: 424 QEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNIL 483

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G+   GK+  A  +F ++   G +   R    +++GL      ++ L ++AY++F KM
Sbjct: 484 IEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLL-----KEGLSDEAYELFRKM 538

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                + +  +Y ++I+   + + +  A+
Sbjct: 539 EDDGFLPNSCSYNVIIQGFLQNQDSSTAI 567



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 142/290 (48%), Gaps = 1/290 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     VD + K   + E   +F+++ K G   +   +N L+    + N+ + A K 
Sbjct: 300 PNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKV 359

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
                  G AP   +++I+I  YC +    EA+ ++  M +    P+  T++ L+  LC+
Sbjct: 360 LDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQ 419

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            GR +EAL +  +M   G  P++ TY+ LL GLC  G ++EA ++L +++   ++PD+  
Sbjct: 420 VGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVL 479

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  +++G    G+   A EL ++    G+ P + T+  +  G  KEG   +   L + M+
Sbjct: 480 YNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKME 539

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
               LP+  SY+ ++ G L+      A+ +  EMV   F  D      LL
Sbjct: 540 DDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 140/302 (46%), Gaps = 11/302 (3%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           + +AL    +M R+  +P++  +   L  +    +      +   +   G+  +VY+   
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           +++  C++     A+ +L +  + G+ P+ +TFNTL NG C EG   + VGL   M +R 
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             PD ISYST++NGL K G    A+ + ++M   G + +     +++  LC     +  L
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLC-----KDTL 247

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           + DA  +  +M  +    D  TY  ++         +EA I  +  +    +P T+TF  
Sbjct: 248 VNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTI 307

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI------TKLDQLEKSYDACALYG 464
           ++  LC EG + +A  +   M +    P+  +Y+ L+       ++D+ +K  D     G
Sbjct: 308 LVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367

Query: 465 AA 466
            A
Sbjct: 368 CA 369



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 115/238 (48%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   + D +   G    V  +N L+         + A     E S   L P++ T+S 
Sbjct: 353 MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYST 412

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C      EA  +   M  +G  P++ T++ L++ LCK G L EAL++L  M    
Sbjct: 413 LMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESK 472

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +P+I  YN L++G+   G++E A E+   +  DG++P + TYT ++ G  K G S+EA 
Sbjct: 473 IEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAY 532

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           EL  +  + G  PN  ++N +  G+ +       + L+  M  +    D  ++  LL+
Sbjct: 533 ELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 21/101 (20%), Positives = 49/101 (48%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L+   ++F  +  DG   ++  +  ++  L+     + A + F +    G  PNS +
Sbjct: 490 AGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCS 549

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           ++++I+ +    D   A ++ID M    +  + +TF +L++
Sbjct: 550 YNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 208/413 (50%), Gaps = 9/413 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S  ++ + + D ++  G    +  +N L+ A+    + + A+   S   S+G  P++ 
Sbjct: 298 KESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAV 357

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +++  C    + E  +++  M  N   P+  TF  +V SLC+ G +  A+EV+D M
Sbjct: 358 TYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHM 417

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +I TY+ +L GLC VGRV++A E+L  +K+ G KPD   YT V+ G C   + 
Sbjct: 418 SEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQW 477

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A EL+ E +     P+ VTFNT+    C++G   + + +++ M +  C PD ++Y+ +
Sbjct: 478 ERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCI 537

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEK 360
           ++GL     I  A+ +  ++   G + D    N+LL+GLC +  W      EDA Q+   
Sbjct: 538 IDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRW------EDAEQLMAN 591

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +     D  T+  VI +L +     +A+  L    E G +P + T++ V+ AL   GK
Sbjct: 592 MMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGK 651

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              AL LL  M      P   +Y+ +I+ L +  K  +A  L    +  G+ P
Sbjct: 652 AQAALELLSGMTN--GTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCP 702



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 183/357 (51%), Gaps = 7/357 (1%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+++TF+ +IR  C +    +A  V D M   G  P+V T++IL+++ CK    ++A+ +
Sbjct: 249 PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMAL 308

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           LD+M   GC+P+I TYN L+  +C  G V+EA  +L N+ + G KPD  TYT V+   C 
Sbjct: 309 LDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCG 368

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R  E  ELL E       P+ VTFNT+    C++G   + + ++  M +  C+ D ++
Sbjct: 369 SERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVT 428

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQ 356
           YS++L+GL   G++  AV +   +  +G + D     ++L+GLC  + WE       A +
Sbjct: 429 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWER------AEE 482

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +  +M       D  T+  V+ +L +    D A+  +    E G  P  +T+N +I  LC
Sbjct: 483 LMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLC 542

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            E  ID A+ LL  +      P   +++ L+  L  +++  DA  L    ++    P
Sbjct: 543 NESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPP 599



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 185/365 (50%), Gaps = 5/365 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+ AL +      A+  F +    G +P+  T+SI++   C ++ + +A  ++D M 
Sbjct: 254 FNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMR 313

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P++ T+ +L+N++C  G + EAL +L  +   GCKP+  TY  +LK LC   R +
Sbjct: 314 AKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWK 373

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           E  E+L  + ++   PD  T+  ++   C+ G  + A+E+++   E G   ++VT++++ 
Sbjct: 374 EVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSIL 433

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G C  G     V LL  +K   C PD I+Y+T+L GL    +   A  +  EM+     
Sbjct: 434 DGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCP 493

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            DE   N+++  LC     +K L++ A +V E+M++     D  TY  +I  L      D
Sbjct: 494 PDEVTFNTVVASLC-----QKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCID 548

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A+  L      G  P  +TFN +++ LCG  + + A  L+  M      P   +++ +I
Sbjct: 549 DAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVI 608

Query: 448 TKLDQ 452
           T L Q
Sbjct: 609 TSLCQ 613



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 203/394 (51%), Gaps = 5/394 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + +FD +   G + SV  ++ LL A    +    A+    E  + G  P+  T+++
Sbjct: 267 IPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNV 326

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   CN+ D  EA  ++  +  +G  P+  T+T ++ SLC S R KE  E+L +M    
Sbjct: 327 LINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNN 386

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P+  T+N ++  LC  G V+ A E++ ++   G   D+ TY++++DG C VGR ++A+
Sbjct: 387 CAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAV 446

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL+     G  P+ + + T+  G C      +   L+  M   +C PD+++++T++  L
Sbjct: 447 ELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASL 506

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G +  A+ + ++M   G   D    N ++ GLC +S      ++DA ++   +    
Sbjct: 507 CQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNES-----CIDDAMELLSDLQSCG 561

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  T+  +++ L    + ++A   + + +     P  +TFN VI +LC +G + +A+
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
             L +M E+  +P+ ++Y +++  L +  K+  A
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAA 655



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 196/400 (49%), Gaps = 15/400 (3%)

Query: 51  SLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE 110
           SL  Q  VDR         I++ D + + G    +  ++ +L  L  +   + AV+  S 
Sbjct: 400 SLCQQGLVDRA--------IEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSR 451

Query: 111 ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR 170
             SYG  P++  ++ +++  C+   +  A +++  M  +   P+  TF  +V SLC+ G 
Sbjct: 452 LKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGL 511

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           +  A+ V++QM   GC P+I TYNC++ GLC    +++A E+L ++++ G KPD+ T+  
Sbjct: 512 VDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNT 571

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++ G C V R  +A +L+   +     P+ +TFNT+    C++G   + +  LK+M +  
Sbjct: 572 LLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENG 631

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C+P+  +YS +++ LLK GK + A+ +   M       D    N+++  L      +   
Sbjct: 632 CVPNSSTYSIVVDALLKAGKAQAALELLSGMT--NGTPDLITYNTVISNL-----TKAGK 684

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           +E+A  +   M       D  TY  +   + +   TD A+  L    + G  P T  +N+
Sbjct: 685 MEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYND 744

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           V+   C + + D A+     M     +P  ++Y +L+  L
Sbjct: 745 VLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEAL 784



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 164/394 (41%), Gaps = 57/394 (14%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + +++   +K  G       +  +L  L    + E A +  +E       P+  TF+ 
Sbjct: 442 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT 501

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C K     A +V++ M +NG  P++ T+  +++ LC    + +A+E+L  +   G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CKP+I T+N LLKGLC V R E+A +++ N+      PD  T+  V+   C+ G   +A+
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621

Query: 246 ELLNEAIERGV---------------------------------TPNVVTFNTLFNGYCK 272
           E L    E G                                  TP+++T+NT+ +   K
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTK 681

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   + + LL++M      PD  +Y +L  G+ +      AV + + +   G   D   
Sbjct: 682 AGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTF 741

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N +L G C       DL   A   F  M     + D  TY I++  L  G   DEA   
Sbjct: 742 YNDVLLGFCRD--RRTDL---AIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEA--- 793

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                             ++ +LC  G +DK L+
Sbjct: 794 ----------------KRLLASLCSLGVLDKKLI 811



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 137/270 (50%), Gaps = 3/270 (1%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + + +++   ++  G    +  FN LL  L  ++  E A +  +        P+  TF
Sbjct: 545 SCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTF 604

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +I   C K    +A + +  M +NG  PN +T++I+V++L K+G+ + ALE+L   G 
Sbjct: 605 NTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLS--GM 662

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P++ TYN ++  L   G++EEA ++L  + ++GL PD  TY ++  G C+   ++ 
Sbjct: 663 TNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDR 722

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A+ +L    + G++P+   +N +  G+C++      +     M    C+PD+ +Y  LL 
Sbjct: 723 AVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLE 782

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
            L   G +  A  +   +   G  +D++++
Sbjct: 783 ALAYGGLLDEAKRLLASLCSLGV-LDKKLI 811


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 207/417 (49%), Gaps = 8/417 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +   + + D +     +  V  +N +L +L    + + A++           P+  
Sbjct: 184 KAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I   C  +    A K++D M D G  P+V T+ +LVN +CK GRL EA++ L+ M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC+PN+ T+N +L+ +C  GR  +A ++L ++   G  P V T+  +++  C+ G  
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+++L +  + G  PN +++N L +G+CKE    + +  L+ M  R C PD ++Y+T+
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L  L K GK+  AV I  ++   G        N+++ GL       K     A ++ ++M
Sbjct: 421 LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK-----AIKLLDEM 475

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K    D  TY  ++  L +  K DEA+   H    MG  P  +TFN+++  LC   + 
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQ 478
           D+A+  L  M      P+ TSY +LI  L     + +A  L      +G++ +   +
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAE 592



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 223/459 (48%), Gaps = 24/459 (5%)

Query: 20  HNKIPQFNKLVVFAAASLSTAESLDLKENPRS-LQAQRFVDRIKASPLKERIDIFDSIKK 78
           H +  + NKL V    S S +  + L    R+ L       ++++S L  R   F+++  
Sbjct: 21  HREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAASKVESSGLNGRAQKFETLSS 80

Query: 79  DGTN-------------WSVSDF--NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
             +N             +++ D   N+ L  +V   E E   KF      +G  P+    
Sbjct: 81  GYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPC 140

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +IR +C      +A K+++ +  +G  P+V T+ ++++  CK+G +  AL VLD   R
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---R 197

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
           +   P++ TYN +L+ LC  G++++A E+L  +      PDV TYT +++  C+      
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           AM+LL+E  +RG TP+VVT+N L NG CKEG   + +  L  M    C P+ I+++ +L 
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
            +   G+   A  +  +M+R GF       N L+  LC      K LL  A  + EKM +
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC-----RKGLLGRAIDILEKMPQ 372

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
                +  +Y  ++    K KK D A+ +L   +  G  P  +T+N ++ ALC +GK++ 
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           A+ +L  +      P   +Y+ +I  L +  K+  A  L
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 198/413 (47%), Gaps = 8/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   L+E     +++   G    +     L+     L +   A K        G  P+ 
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+++MI  YC   +   A  V+D M      P+V T+  ++ SLC SG+LK+A+EVLD+
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M +  C P++ TY  L++  C    V  A ++L  +++ G  PDV TY  +++G CK GR
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA++ LN+    G  PNV+T N +    C  G  M    LL  M ++   P  ++++ 
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+N L + G +  A+ I ++M + G + +    N LL G C    +EK + + A +  E+
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC----KEKKM-DRAIEYLER 404

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +    D  TY  ++  L K  K ++A+  L+     G  P  IT+N VI  L   GK
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             KA+ LL  M      P   +Y  L+  L +  K  +A   +    + G+ P
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 208/417 (49%), Gaps = 8/417 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +   + + D +     +  V  +N +L +L    + + A++           P+  
Sbjct: 184 KAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I   C  +   +A K++D M D G  P+V T+ +LVN +CK GRL EA++ L+ M
Sbjct: 241 TYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC+PN+ T+N +L+ +C  GR  +A ++L ++   G  P V T+  +++  C+ G  
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+++L +  + G  PN +++N L +G+CKE    + +  L+ M  R C PD ++Y+T+
Sbjct: 361 GRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L  L K GK+  AV I  ++   G        N+++ GL       K     A ++ ++M
Sbjct: 421 LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK-----AIKLLDEM 475

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K    D  TY  ++  L +  K DEA+   H    MG  P  +TFN+++  LC   + 
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQT 535

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQ 478
           D+A+  L  M      P+ TSY +LI  L     + +A  L      +G++ +   +
Sbjct: 536 DRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSAE 592



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 223/459 (48%), Gaps = 24/459 (5%)

Query: 20  HNKIPQFNKLVVFAAASLSTAESLDLKENPRS-LQAQRFVDRIKASPLKERIDIFDSIKK 78
           H +  + NKL V    + S +  + L    R+ L       ++++S L  R   FD++  
Sbjct: 21  HRECKRGNKLDVSGRTTRSISSKVPLWSRKRNRLVLVSAASQVESSGLNGRAQKFDTLAS 80

Query: 79  DGTNW--------SVSDF-------NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
             +N         + S F       N+ L  LV   E E   KF      +G  P+    
Sbjct: 81  GHSNSNGNGHFSSANSSFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPC 140

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +IR +C      +A K+++ +  +G  P+V T+ ++++  CK+G +  AL VLD   R
Sbjct: 141 TTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---R 197

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
           +   P++ TYN +L+ LC  G++++A E+L  +      PDV TYT +++  C+     +
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQ 257

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           AM+LL+E  +RG TP+VVT+N L NG CKEG   + +  L  M    C P+ I+++ +L 
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
            +   G+   A  +  +M+R GF       N L+  LC      K LL  A  + EKM K
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC-----RKGLLGRAIDILEKMPK 372

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
                +  +Y  ++    K KK D A+ +L   +  G  P  +T+N ++ ALC +GK++ 
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           A+ +L  +      P   +Y+ +I  L +  K+  A  L
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 199/413 (48%), Gaps = 8/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   L+E     +++   G    +     L+     + +   A K        G  P+ 
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDV 172

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+++MI  YC   +   A  V+D M      P+V T+  ++ SLC SG+LK+A+EVLD+
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M +  C P++ TY  L++  C    V +A ++L  +++ G  PDV TY  +++G CK GR
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA++ LN+    G  PNV+T N +    C  G  M    LL  M ++   P  ++++ 
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+N L + G +  A+ I ++M + G + +    N LL G C    +EK + + A +  E+
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFC----KEKKM-DRAIEYLER 404

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +    D  TY  ++  L K  K ++A+  L+     G  P  IT+N VI  L   GK
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             KA+ LL  M      P   +Y  L+  L +  K  +A   +    + GV P
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRP 517



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 115/242 (47%), Gaps = 8/242 (3%)

Query: 23  IPQFNKLVVFAAASLSTAESLDLKE-------NPRSLQAQRFVDRI-KASPLKERIDIFD 74
           +  FN L+ F         ++D+ E        P SL     +    K   +   I+  +
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
            +   G    +  +N +L AL    + E AV+  ++ SS G +P   T++ +I       
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
              +A K++D M      P+  T++ LV  L + G++ EA++   +  R+G +PN  T+N
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFN 523

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            ++ GLC   + + A + L+ + N G KP   +YT +++G    G + EA+ELLNE   +
Sbjct: 524 SIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNK 583

Query: 255 GV 256
           G+
Sbjct: 584 GL 585


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 197/382 (51%), Gaps = 5/382 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S++DF  LL+++  +    T +    +  S+G+ PN +T +I+I  +C+      A  V+
Sbjct: 67  SIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVL 126

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   G+ PN+ TF  L+  LC  G++ E L + D+M   G +PN+ TY  L+ GLC V
Sbjct: 127 AKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKV 186

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A  +L +++    +PDV  YT+++D  CK  +  +A  L +E I +G++P++ T+
Sbjct: 187 GSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTY 246

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L +  C          LL  M     +P+ + +ST+++ L K GK+  A  +   M++
Sbjct: 247 NSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIK 306

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E +    N+L+ G C++S      +++A +VF+ M  K    D  +Y  +I    K 
Sbjct: 307 RGVEPNVVTYNALMDGHCLRSE-----MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 361

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           ++ ++A+           IP T+T++ ++  LC  G++  A+ L   M    +IP   SY
Sbjct: 362 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 421

Query: 444 DMLITKLDQLEKSYDACALYGA 465
            +L+  L +  +  +A AL  A
Sbjct: 422 CILLDYLCKNRRLDEAIALLKA 443



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 198/403 (49%), Gaps = 7/403 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +   I K G   +++ FN L+  L +  +    +  F +    G  PN  T+  +I   C
Sbjct: 125 VLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLC 184

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A +++  M      P+V  +T +++SLCK  ++ +A  +  +M   G  P+I 
Sbjct: 185 KVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIF 244

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+  LC +   +    +L  + N  + P+V  ++ V+D  CK G+  EA ++++  
Sbjct: 245 TYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 304

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I+RGV PNVVT+N L +G+C      + V +   M  +   PD +SYSTL+NG  K  +I
Sbjct: 305 IKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 364

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ +F+EM R     +    ++L+ GLC         L+DA  +F +M  +  + D  
Sbjct: 365 EKAMYLFEEMCRKELIPNTVTYSTLMHGLC-----HVGRLQDAIALFHEMVTRGQIPDFV 419

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFL 430
           +Y I++  L K ++ DEA I L  AIE  ++ P    +  VI  +C  G+++ A  L   
Sbjct: 420 SYCILLDYLCKNRRLDEA-IALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSN 478

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +      P+  +Y ++I  L Q     +A  L+G   ++G  P
Sbjct: 479 LSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSP 521



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 182/367 (49%), Gaps = 5/367 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K       I +  S+++      V  +  ++ +L    +   A   FSE    G++P+ +
Sbjct: 185 KVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIF 244

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   CN  ++     +++ M ++   PNV  F+ +V++LCK G++ EA +V+D M
Sbjct: 245 TYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 304

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G +PN+ TYN L+ G C    ++EA ++   +   G  PDV +Y+ +++G+CK+ R 
Sbjct: 305 IKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 364

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +AM L  E   + + PN VT++TL +G C  G     + L   M  R  +PD +SY  L
Sbjct: 365 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCIL 424

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+ L K  ++  A+++ K +     + D ++   ++ G+C ++ E    LE A  +F  +
Sbjct: 425 LDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMC-RAGE----LEAARDLFSNL 479

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           + K    +  TY I+I  L +     EA          G+ P   T+N + +      + 
Sbjct: 480 SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNET 539

Query: 422 DKALLLL 428
            + + LL
Sbjct: 540 LRGIQLL 546



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 186/384 (48%), Gaps = 6/384 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +FD +  +G   +V  +  L+  L  +     A++           P+   ++ 
Sbjct: 154 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 213

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A  +   M   G  P++ T+  L+++LC     K    +L++M    
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 273

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+  ++ ++  LC  G+V EA++++  +   G++P+V TY A+MDG C     +EA+
Sbjct: 274 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 333

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +  + +G  P+VV+++TL NGYCK     K + L + M ++  +P+ ++YSTL++GL
Sbjct: 334 KVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGL 393

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+++ A+++F EMV  G   D      LL  LC     +   L++A  + + +    
Sbjct: 394 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLC-----KNRRLDEAIALLKAIEGSN 448

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D   Y IVI  + +  + + A     +    G  P   T+  +I  LC +G + +A 
Sbjct: 449 MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEAS 508

Query: 426 LLLFLMYEHAKIPSRTSYDMLITK 449
            L   M      P+  +Y+ LIT+
Sbjct: 509 KLFGEMKRKGYSPNGCTYN-LITR 531



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 162/351 (46%), Gaps = 30/351 (8%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  FT L+ S+ K       L +  QM   G  PNI T N L+   C++ R+  A+ +
Sbjct: 66  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +P++ T+  ++ G C  G+  E + L ++ I  G  PNVVT+ TL NG CK
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G+    + LL+ M++ NC PD + Y+++++ L K  ++  A ++F EM+  G       
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 333 MNSLLRGLC-MKSWEEKDLL-----------------------------EDAYQVFEKMT 362
            NSL+  LC +  W+    L                              +A+ V + M 
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           K+    +  TY  ++       + DEA+      +  G  P  ++++ +I   C   +I+
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           KA+ L   M     IP+  +Y  L+  L  + +  DA AL+   + +G IP
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIP 416



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 143/290 (49%), Gaps = 1/290 (0%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E ++ K  P  +     VD + K   + E  D+ D + K G   +V  +N L+    + +
Sbjct: 268 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRS 327

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           E + AVK F      G AP+  ++S +I  YC      +A  + + M      PN  T++
Sbjct: 328 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 387

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L++ LC  GRL++A+ +  +M   G  P+  +Y  LL  LC   R++EA  +L  ++  
Sbjct: 388 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 447

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            + PD+  YT V+DG C+ G    A +L +    +G+ PNV T+  + NG C++G   + 
Sbjct: 448 NMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEA 507

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
             L   MK++   P+  +Y+ +  G L+  +    + + +EM+  GF  D
Sbjct: 508 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSAD 557



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 127/244 (52%), Gaps = 1/244 (0%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E + +FD++   G    V  ++ L+     +   E A+  F E     L PN+ T+
Sbjct: 327 SEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTY 386

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           S ++   C+     +A  +   M   G  P+  ++ IL++ LCK+ RL EA+ +L  +  
Sbjct: 387 STLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEG 446

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P+IQ Y  ++ G+C  G +E A ++  N+ + GL P+V+TYT +++G C+ G   E
Sbjct: 447 SNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAE 506

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A +L  E   +G +PN  T+N +  G+ +    ++G+ LL+ M  R    D +S ST+L 
Sbjct: 507 ASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSAD-VSTSTVLV 565

Query: 304 GLLK 307
            +L 
Sbjct: 566 EMLS 569



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 139/302 (46%), Gaps = 11/302 (3%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           L +AL   ++M  +   P+I  +  LL  +  +        +   + + G+ P++YT   
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           +++ FC + R   A  +L + ++ G  PN+ TFNTL  G C EG   + + L   M    
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             P+ ++Y TL+NGL K G    A+ + + M +   + D  +  S++  LC     +   
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLC-----KDRQ 223

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           +  A+ +F +M  +       TY  +I  L    +       L+  +    +P  + F+ 
Sbjct: 224 VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 283

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI------TKLDQLEKSYDACALYG 464
           V+ ALC EGK+ +A  ++ +M +    P+  +Y+ L+      +++D+  K +D     G
Sbjct: 284 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 343

Query: 465 AA 466
            A
Sbjct: 344 FA 345



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 91/187 (48%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L  +   + A+  F E  + G  P+  ++ I++   C      EA  ++  + 
Sbjct: 386 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 445

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +   P++  +TI+++ +C++G L+ A ++   +   G  PN+ TY  ++ GLC  G + 
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLA 505

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA ++   +K  G  P+  TY  +  GF +   +   ++LL E + RG + +V T   L 
Sbjct: 506 EASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 565

Query: 268 NGYCKEG 274
                +G
Sbjct: 566 EMLSDDG 572



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 82/188 (43%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ I +F  +   G       +  LL  L      + A+          + P+   ++I
Sbjct: 399 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTI 458

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C   +   AR +   +   G HPNV T+TI++N LC+ G L EA ++  +M R G
Sbjct: 459 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 518

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TYN + +G           ++L  +   G   DV T T +++     G      
Sbjct: 519 YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVK 578

Query: 246 ELLNEAIE 253
           ++L+E ++
Sbjct: 579 QILSEFLQ 586



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 55/119 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+   D+F ++   G + +V  +  ++  L        A K F E    G +PN  
Sbjct: 465 RAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGC 524

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T++++ R +   N+     +++  M   G+  +V+T T+LV  L   G  +   ++L +
Sbjct: 525 TYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 583


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 200/383 (52%), Gaps = 6/383 (1%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           + G   +V  +N L+ AL      E AV    +    G APN+ T++ ++  +C   +  
Sbjct: 3   RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 62

Query: 138 EARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            A +V+  M + G   PN+ TF  +VN LCK+GR++ A +V D+M R G  P++ +YN L
Sbjct: 63  GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 122

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           L G C VG + E+  +   +   GL PDV T+T+++   CK G   +A+ L+ +  ERG+
Sbjct: 123 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 182

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
             N VTF  L +G+CK+G     +  ++ M+K    P  + Y+ L+NG  K G++  A  
Sbjct: 183 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 242

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           + +EM     + D    ++++ G C         L+ A+Q+ +KM KK  + D  TY  +
Sbjct: 243 LIREMEAKRVKPDVVTYSTIISGYCKVGN-----LDSAFQLNQKMLKKGVLPDAITYSSL 297

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           IR L + K+ ++A     + +++G  P   T+  +I   C EG ++KAL L   M     
Sbjct: 298 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 357

Query: 437 IPSRTSYDMLITKLDQLEKSYDA 459
           +P   +Y +LI  L +  ++ +A
Sbjct: 358 LPDVVTYSVLINGLSKSARTKEA 380



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 170/311 (54%), Gaps = 8/311 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN ++  L      E A K F E    GLAP+  +++ ++  YC      E+  V   M 
Sbjct: 84  FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 143

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V TFT L+++ CK+G L++A+ ++ QM   G + N  T+  L+ G C  G ++
Sbjct: 144 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 203

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A   +  ++  G++P V  Y A+++G+CK+GR + A EL+ E   + V P+VVT++T+ 
Sbjct: 204 DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTII 263

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +GYCK G       L + M K+  LPD I+YS+L+ GL +  ++  A  +F+ M++ G +
Sbjct: 264 SGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 323

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            DE    +L+ G C +   EK     A  + ++M +K  + D  TY ++I  L K  +T 
Sbjct: 324 PDEFTYTTLIDGHCKEGNVEK-----ALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 378

Query: 388 EA---LIHLHH 395
           EA   L  L+H
Sbjct: 379 EAHRLLFKLYH 389



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 173/330 (52%), Gaps = 8/330 (2%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M  +G  PNV T+ ILV +LC  GRL+EA+ V+  M   GC PN  TYN L+   C  G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 206 VEEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           ++ A  ++  ++ +G  KP++ T+ ++++G CK GR   A ++ +E +  G+ P+VV++N
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL +GYCK G   + + +   M +R  +PD +++++L++   K G +  AV++  +M   
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G  ++E    +L+ G C K +     L+DA    E+M K         Y  +I    K  
Sbjct: 181 GLRMNEVTFTALIDGFCKKGF-----LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 235

Query: 385 KTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           + D A   L   +E   + P  +T++ +I   C  G +D A  L   M +   +P   +Y
Sbjct: 236 RMDLAR-ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 294

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
             LI  L + ++  DAC L+   L+ GV P
Sbjct: 295 SSLIRGLCEEKRLNDACELFENMLQLGVQP 324



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 195/413 (47%), Gaps = 55/413 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++    +FD + ++G    V  +N LL     +     ++  FSE +  GL P+  
Sbjct: 93  KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 152

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C   +  +A  ++  M + G   N  TFT L++  CK G L +AL  +++M
Sbjct: 153 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 212

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG-- 239
            + G +P++  YN L+ G C +GR++ A E++  ++   +KPDV TY+ ++ G+CKVG  
Sbjct: 213 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 272

Query: 240 ---------------------------------RSNEAMELLNEAIERGVTPNVVTFNTL 266
                                            R N+A EL    ++ GV P+  T+ TL
Sbjct: 273 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 332

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF-----KEM 321
            +G+CKEG   K + L   M ++  LPD ++YS L+NGL K  + + A  +      ++ 
Sbjct: 333 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 392

Query: 322 VRFGFEVDERMMN----------SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           V    + D  M+           +LL+G CMK      L+++A +V++ M  +    D  
Sbjct: 393 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG-----LMKEADKVYQSMLDRNWKLDGS 447

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            Y I+I    +G    +AL      +  G  P + +  ++++ L  EG + +A
Sbjct: 448 VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 500



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 112/254 (44%), Gaps = 15/254 (5%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L        A + F      G+ P+ +T++ +I  +C + +  +A  + D M 
Sbjct: 294 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 353

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVL---------------DQMGRIGCKPNIQT 192
             G  P+V T+++L+N L KS R KEA  +L               D +     K   ++
Sbjct: 354 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 413

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
              LLKG C  G ++EA ++  ++ +   K D   Y+ ++ G C+ G   +A+    + +
Sbjct: 414 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 473

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
             G +PN  +  +L  G  +EG  ++    ++ +     L D  +   L++   K G + 
Sbjct: 474 RSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVD 533

Query: 313 PAVSIFKEMVRFGF 326
             + +   M R G 
Sbjct: 534 ALIDVLCGMARDGL 547



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 64/134 (47%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++ +C K    EA KV   M D  +  + + ++IL++  C+ G +++AL    QM R G
Sbjct: 417 LLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG 476

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  +   L++GL   G V EA   + ++       D     A++D   K G  +  +
Sbjct: 477 FSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALI 536

Query: 246 ELLNEAIERGVTPN 259
           ++L      G+ P+
Sbjct: 537 DVLCGMARDGLLPS 550


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 205/392 (52%), Gaps = 8/392 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+E + + + +++ G   ++  +N L+ AL  L+    A     +    G APN  
Sbjct: 191 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 250

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ ++  +C + +  +ARK++  M   G  PNV T++ L++ LCKS +  EA EVL++M
Sbjct: 251 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 310

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TY+ L+ GLC   ++EEA +ML  +   G  PDV  Y++++  FCK G+ 
Sbjct: 311 KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 370

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYST 300
            EA + L E  ++  +P+VVT+NT+ +G CK G   +   +L+ M++  + LPD ++YST
Sbjct: 371 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYST 430

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++NGL K   +  A  +   M + G   D     +++ GLC     +   LE+A  + + 
Sbjct: 431 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLC-----KCGRLEEAEYLLQG 485

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +     +  TY  +I  L K +K DEA   +      G  P  +T+N ++  LC  G+
Sbjct: 486 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 545

Query: 421 IDKALLLLFLMYEHAK--IPSRTSYDMLITKL 450
           I +A  L+  M +      P   +Y  ++  L
Sbjct: 546 IKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 577



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 198/379 (52%), Gaps = 6/379 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
            D ++  G + +V  +  L+ A     + E A+K   E    G  PN  T+++++   C 
Sbjct: 167 MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
            +    A+ V+  M + G+ PNV TF  LV+  CK G + +A ++L  M   G +PN+ T
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y+ L+ GLC   +  EA E+L  +K  G+ PD +TY+A++ G CK  +  EA ++L    
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
             G TP+VV ++++ + +CK G  ++    L+ M+K+   PD ++Y+T+++GL K GKI 
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406

Query: 313 PAVSIFKEMVRFGFEV-DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
            A  I ++M   G  + D    ++++ GLC     + D+L +A ++ ++M K     D  
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLC-----KSDMLVEAQKLLDRMCKAGCNPDVV 461

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L K  + +EA   L      G  P  +T+  +I  LC   K+D+A  ++  M
Sbjct: 462 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 521

Query: 432 YEHAKIPSRTSYDMLITKL 450
                 P+  +Y+ ++  L
Sbjct: 522 RNAGCPPNLVTYNTMVNGL 540



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 202/408 (49%), Gaps = 9/408 (2%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           +E  D+F S         V  +N ++       +   A++   E  S G AP+++T + +
Sbjct: 94  REAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPI 153

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I    N  D   A   +D +   G  PNV T+T L+ +  ++ +L+EA+++L++M   GC
Sbjct: 154 ITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGC 210

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN+ TYN L+  LC +  V  A +++  +   G  P+V T+ +++DGFCK G  ++A +
Sbjct: 211 PPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARK 270

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           LL   + +G+ PNVVT++ L +G CK    ++   +L+ MK R   PD  +YS L++GL 
Sbjct: 271 LLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLC 330

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K  KI  A  + + M   G   D  + +S++   C    +   LLE A +  ++M K+  
Sbjct: 331 KADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC----KSGKLLE-AQKTLQEMRKQRK 385

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKAL 425
             D  TY  VI  L K  K  EA + L    E G + P  +T++ VI  LC    + +A 
Sbjct: 386 SPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQ 445

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            LL  M +    P   +Y  +I  L +  +  +A  L     + G  P
Sbjct: 446 KLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 493



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 140/263 (53%), Gaps = 3/263 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++E   +   +   G    V  ++ ++ A     +   A K   E      +P+  
Sbjct: 331 KADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVV 390

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T++ +I   C      EA+ +++ M ++G   P+V T++ ++N LCKS  L EA ++LD+
Sbjct: 391 TYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDR 450

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + GC P++ TY  ++ GLC  GR+EEA  +L  +K  G  P+V TYT ++ G CK  +
Sbjct: 451 MCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARK 510

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK--KRNCLPDKISY 298
            +EA  ++ E    G  PN+VT+NT+ NG C  G   +   L++ MK  +  C PD  +Y
Sbjct: 511 VDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATY 570

Query: 299 STLLNGLLKWGKIRPAVSIFKEM 321
            T++N L+    ++ A  + ++M
Sbjct: 571 RTIVNALMSSDLVQEAEQLLEQM 593



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 159/392 (40%), Gaps = 73/392 (18%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G+     ++  L+  L +  + +EA ++        C+P++ +YN ++ G C  G +  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 210 YEMLMNVKNDGLKPD--------------------------------VYTYTAVMDGFCK 237
            E+L  +K+ G  PD                                V TYTA++  F +
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFAR 191

Query: 238 VGRSNEAMELLNEAIERGV-----------------------------------TPNVVT 262
             +  EAM+LL E  ERG                                     PNV+T
Sbjct: 192 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 251

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           FN+L +G+CK G       LL +M  +   P+ ++YS L++GL K  K   A  + +EM 
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 311

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
             G   D    ++L+ GLC     + D +E+A Q+  +M       D   Y  +I    K
Sbjct: 312 TRGVTPDAFTYSALIHGLC-----KADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 366

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI-PSRT 441
             K  EA   L    +    P  +T+N VI  LC  GKI +A ++L  M E   + P   
Sbjct: 367 SGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVV 426

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +Y  +I  L + +   +A  L     K G  P
Sbjct: 427 TYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 458



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 2/159 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  L E   + D + K G N  V  +  ++  L      E A          G APN  
Sbjct: 437 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 496

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C      EA +V++ M + G  PN+ T+  +VN LC SGR+KEA +++ +M
Sbjct: 497 TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 556

Query: 182 --GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
             GR  C P+  TY  ++  L     V+EA ++L  +K+
Sbjct: 557 KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 200/418 (47%), Gaps = 40/418 (9%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  +   G + +V  +N L+         E  ++FF E       PN  T++ +I  YC
Sbjct: 190 VYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYC 249

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA K++  M   G  PN+ T+ +++N LC+ GR++E   VL +M R G  P+  
Sbjct: 250 KLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGV 309

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G C VG   +A  +   +  +GL PDV TYT++++  CK G  N AME  ++ 
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369

Query: 252 IERGVTPN-----------------------------------VVTFNTLFNGYCKEGTP 276
             RG+ PN                                   +VT+N L NG+C  G  
Sbjct: 370 HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRM 429

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            + +GLL+ M+ +   PD +SYST++ G  ++ ++  A  +  EMV  G   D    +SL
Sbjct: 430 EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSL 489

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           ++GLC     E+  L +A  +F++M  K  + D  TY  +I    K    +EAL      
Sbjct: 490 IQGLC-----EQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEM 544

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
           I+ G +P T+T+N +I  L  + +  +A  LL  ++    IP+  +YD LI     +E
Sbjct: 545 IKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIE 602



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 211/409 (51%), Gaps = 6/409 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET-AVKFFSEASSYGLAPNSWTFS 124
           +++ ++I D  K +G    V  +N +L ++V   +    A K + E  + G++ N ++++
Sbjct: 148 IEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYN 207

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           I+IR +C   +     +  + M  N   PNV T+  ++ + CK  R+ EA ++L  MG  
Sbjct: 208 ILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLE 267

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G +PN+ TYN ++ GLC VGR+EE   +L  +   G  PD  TY  +++G+CKVG  ++A
Sbjct: 268 GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQA 327

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           + L +E +  G+ P+VVT+ +L N  CK G   + +     M  R   P+ ++Y++L+NG
Sbjct: 328 LVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLING 387

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             + G +  A  I+ EM+R GF       N+LL G C+        +E+A  +   M  K
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGR-----MEEAIGLLRGMEGK 442

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  +Y  +I    + ++ D A       +E G  P  IT++++IQ LC + ++++A
Sbjct: 443 GLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEA 502

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L   M   + +P   +Y  LI    +     +A  L+   +K+G +P
Sbjct: 503 CDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLP 551



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 208/428 (48%), Gaps = 20/428 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   +  S+  +G   ++  +N ++  L  +   E      +E    G AP+  
Sbjct: 250 KLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGV 309

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  YC   +F +A  +   M  NG  P+V T+T L+N++CK+G L  A+E  DQM
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +PN  TY  L+ G    G ++EAY +   +   G  P + TY A+++G C  GR 
Sbjct: 370 HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRM 429

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA+ LL     +G++P+VV+++T+  G+C+     +   +   M ++   PD I+YS+L
Sbjct: 430 EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSL 489

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL +  ++  A  +F+EM+      DE    SL+ G C    +E D L +A  + ++M
Sbjct: 490 IQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYC----KEGD-LNEALNLHDEM 544

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA------- 414
            KK  + D  TY ++I  L K  +T EA   L        IP  IT++ +I++       
Sbjct: 545 IKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFK 604

Query: 415 --------LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
                    C +G +++A  +   M +  + P+   Y+++I    +    + A  LY   
Sbjct: 605 SVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEM 664

Query: 467 LKQGVIPQ 474
           +  G IP 
Sbjct: 665 VDFGFIPH 672



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 206/428 (48%), Gaps = 22/428 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K     + + +   + ++G    V  +  L+  +        A++FF +    GL PN  
Sbjct: 320 KVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGV 379

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +  K    EA ++ D M  +G+ P + T+  L+N  C SGR++EA+ +L  M
Sbjct: 380 TYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGM 439

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ +Y+ ++ G C    ++ A++M   +   G+ PD  TY++++ G C+  R 
Sbjct: 440 EGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRL 499

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           NEA +L  E + + + P+  T+ +L NGYCKEG   + + L   M K+  LPD ++Y+ L
Sbjct: 500 NEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVL 559

Query: 302 LNGLLKWGKIRPAVSI-----FKEMVRFGFEVDE----------RMMNSLLRGLCMKSWE 346
           +NGL K  + R A  +     + E +  G   D           + + +L++G CMK   
Sbjct: 560 INGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKG-- 617

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
              L+ +A QVFE M K+    +   Y ++I    +     +A       ++ G IP T+
Sbjct: 618 ---LMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTV 674

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC-ALYGA 465
           T   +++AL  EG  ++  L++  +    K+ S       + +++  E + DA   L   
Sbjct: 675 TIIALVKALYSEGMDEQLNLVIRDILRSCKL-SDAELSKALVQINHKEGNIDAVFNLLTE 733

Query: 466 ALKQGVIP 473
             K G +P
Sbjct: 734 MAKDGFLP 741



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 186/392 (47%), Gaps = 43/392 (10%)

Query: 119 NSWTFSIMIRCYCNKNDFFE-ARKVIDCMFDNGYHPNVT--------------------- 156
           +S  F ++++  C+  +F E A  ++D    NG+ P V                      
Sbjct: 131 SSAVFDLVVKS-CSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEK 189

Query: 157 ---------------TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
                          ++ IL+   C +G L+  L   ++M R  C PN+ TYN ++   C
Sbjct: 190 VYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYC 249

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
            + R++EA+++L ++  +GL+P++ TY  V++G C+VGR  E   +L E   +G  P+ V
Sbjct: 250 KLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGV 309

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+NTL NGYCK G   + + L   M +    PD ++Y++L+N + K G +  A+  F +M
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G   +     SL+ G     + +K  +++AY+++++M +        TY  ++    
Sbjct: 370 HVRGLRPNGVTYTSLING-----FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHC 424

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
              + +EA+  L      G  P  ++++ +I   C   ++D+A  +   M E    P   
Sbjct: 425 VSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAI 484

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +Y  LI  L +  +  +AC L+   L + ++P
Sbjct: 485 TYSSLIQGLCEQRRLNEACDLFQEMLNKSLLP 516



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 131/289 (45%), Gaps = 6/289 (2%)

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE-A 244
           C  +   ++ ++K   Y+  +E+A  ++   K +G  P V +Y A++D   +  +    A
Sbjct: 128 CNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFA 187

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            ++  E I  GV+ NV ++N L  G+C  G    G+   + M++  CLP+ ++Y+T++  
Sbjct: 188 EKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGA 247

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             K  +I  A  + + M   G E +    N ++ GLC         +E+   V  +M +K
Sbjct: 248 YCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGR-----IEETSGVLAEMDRK 302

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY  ++    K     +AL+     +  G  P  +T+ ++I  +C  G +++A
Sbjct: 303 GFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRA 362

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +     M+     P+  +Y  LI    Q     +A  ++   ++ G  P
Sbjct: 363 MEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPP 411



 Score = 41.6 bits (96), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 84/213 (39%), Gaps = 15/213 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK-----FFSEASSYGL 116
           K   L E +++ D + K G       +N L+  L        A +     F+ E+   G+
Sbjct: 530 KEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGI 589

Query: 117 APNSWTFS----------IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
             ++   S           +I+ +C K    EA +V + M      PN   + ++++  C
Sbjct: 590 TYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHC 649

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           + G + +A ++  +M   G  P+  T   L+K L   G  E+   ++ ++       D  
Sbjct: 650 RDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAE 709

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
              A++    K G  +    LL E  + G  P+
Sbjct: 710 LSKALVQINHKEGNIDAVFNLLTEMAKDGFLPS 742


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 210/390 (53%), Gaps = 15/390 (3%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA----RKVI 143
           +N L+       + E A +  +E    G +P+  T S +++  CN  +   A    R+ +
Sbjct: 108 YNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESV 167

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           +C       P+   F ILV+ LCK+ +L EA +++++M   G  P++ TYN L+ GLC  
Sbjct: 168 ECA------PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKS 221

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            R+EEA ++L  +    ++P++ TY  ++ G+CK G +  A +L+   I+ G  P+VVTF
Sbjct: 222 YRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTF 281

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L +G+C++    K   +L LMKK  C P+ ++Y+ L++GL   G+   A  +  EM  
Sbjct: 282 NSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDG 341

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D    NSL+ G+  ++++    +E A+Q+   M ++  + D  +Y  +   L K 
Sbjct: 342 RGILPDIITYNSLI-GIFCRNFQ----IEQAFQIQNLMVERGVIPDGISYCTLAVALLKS 396

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           ++ DEA   L +  + G IP   TFN++++ LC   ++D+A  LL +M      P+ ++Y
Sbjct: 397 ERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTY 456

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++L+T L +  +  DA  +    + +G+ P
Sbjct: 457 EVLVTGLCKAGRVDDAKEVLVMMVSEGIQP 486



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 187/399 (46%), Gaps = 42/399 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++    +   +K+ G +  V   + ++ AL        A+++F E  S   AP+S 
Sbjct: 117 KAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSV 174

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+I++   C  N   EAR++I+ M + G  P+V T+  L++ LCKS R++EA ++L+ M
Sbjct: 175 LFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETM 234

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK---- 237
            +   +PN+ TYN L+ G C  G    A++++  +   G  PDV T+ +++ GFC+    
Sbjct: 235 VKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKI 294

Query: 238 -------------------------------VGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                                           GR+NEA ELL+E   RG+ P+++T+N+L
Sbjct: 295 DKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSL 354

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
              +C+     +   +  LM +R  +PD ISY TL   LLK  +   A ++   M   G 
Sbjct: 355 IGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGA 414

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             +    NSL+ GLC         L++A  +   M +        TY +++  L K  + 
Sbjct: 415 IPNLFTFNSLMEGLCCSRR-----LDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRV 469

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           D+A   L   +  G  P   +   ++  L  EGK D AL
Sbjct: 470 DDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLAL 508



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 165/356 (46%), Gaps = 40/356 (11%)

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           H N T    L+ +L K+ R  +A ++  D++    C  N  TYN L+ G C  G +E A+
Sbjct: 67  HNNFTC-NCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAF 125

Query: 211 EMLMNVKNDGLKPDVYTYTAVMD---------------------------------GFCK 237
           ++L  +K  G  PDV T+++++                                  G CK
Sbjct: 126 QLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCK 185

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             + +EA +++ E  ERG+ P+VVT+N+L +G CK     +   LL+ M KR   P+ ++
Sbjct: 186 ANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVT 245

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+TL+ G  K G    A  + + M++ G   D    NSL+ G C KS  +K     A +V
Sbjct: 246 YNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDK-----ACEV 300

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
              M K +   +  TY ++I  L    + +EA   L      G +P  IT+N++I   C 
Sbjct: 301 LHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCR 360

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +I++A  +  LM E   IP   SY  L   L + E+  +A AL       G IP
Sbjct: 361 NFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIP 416



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 159/336 (47%), Gaps = 5/336 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA+ L E   + + + + G    V  +N L+  L      E A +         + PN  
Sbjct: 185 KANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLV 244

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  YC       A ++I+ M  +G HP+V TF  L++  C+  ++ +A EVL  M
Sbjct: 245 TYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLM 304

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +  C PN+ TYN L+ GLC  GR  EA E+L  +   G+ PD+ TY +++  FC+  + 
Sbjct: 305 KKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQI 364

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A ++ N  +ERGV P+ +++ TL     K     +   LL  M     +P+  ++++L
Sbjct: 365 EQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSL 424

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL    ++  A  +   M R G +        L+ GLC     +   ++DA +V   M
Sbjct: 425 MEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLC-----KAGRVDDAKEVLVMM 479

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
             +       + G ++ TL +  K D AL +    +
Sbjct: 480 VSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVV 515


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 214/412 (51%), Gaps = 8/412 (1%)

Query: 66  LKERIDIFDSIKKDGTNW--SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           L++ + +FD + K+ T    SVS ++ L+  L  +   E A     +    G  P++ T+
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVS-YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           +++I+  C++    +A  + D M   G  PNV T+T+L++ LC+ G+++EA  V  +M +
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P++ TYN L+ G C  GRV  A+E+L  ++    KP+V T+  +M+G C+VG+  +
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A+ LL   ++ G++P++V++N L +G C+EG       LL  M   +  PD ++++ ++N
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
              K GK   A +    M+R G  +DE    +L+ G+C K  + +    DA  + E + K
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC-KVGKTR----DALFILETLVK 539

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
              +T P +  +++  L KG K  E L  L    ++G +P  +T+  ++  L   G I  
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +  +L LM     +P+   Y ++I  L Q  +  +A  L  A    GV P  
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 175/400 (43%), Gaps = 76/400 (19%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSG-----------------------------------R 170
           M  +G+   +  +  +VN+LCK+G                                    
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245

Query: 171 LKEALEVLDQMGR-IGCKPNIQTYNCLLKGLCYVGRVEEA------------------YE 211
           L++AL+V D M + + C PN  +Y+ L+ GLC VGR+EEA                  Y 
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305

Query: 212 MLMNVKND-----------------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
           +L+    D                 G KP+V+TYT ++DG C+ G+  EA  +  + ++ 
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
            + P+V+T+N L NGYCK+G  +    LL +M+KR C P+  +++ L+ GL + GK   A
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           V + K M+  G   D    N L+ GLC +       +  AY++   M       D  T+ 
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGH-----MNTAYKLLSSMNCFDIEPDCLTFT 480

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            +I    K  K D A   L   +  G     +T   +I  +C  GK   AL +L  + + 
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             + +  S ++++  L +  K  +  A+ G   K G++P 
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPS 580



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 6/290 (2%)

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G + N   Y+ LL  L  +     AY     ++ DG    +  Y  +++  CK G +  A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLN 303
              +++ ++ G   +     +L  G+C+       + +  +M K   C P+ +SYS L++
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL + G++  A  +  +M   G +   R    L++ LC     ++ L++ A+ +F++M  
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC-----DRGLIDKAFNLFDEMIP 329

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           +    +  TY ++I  L +  K +EA       ++    P  IT+N +I   C +G++  
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A  LL +M + A  P+  +++ L+  L ++ K Y A  L    L  G+ P
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 130/305 (42%), Gaps = 22/305 (7%)

Query: 37  LSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMAL 95
           L T   + +   P SL     +D + K   +KE + +   I K G   SV  +  L+  L
Sbjct: 534 LETLVKMRILTTPHSLNV--ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591

Query: 96  VMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV 155
           +   +   + +        G  PN + ++I+I   C      EA K++  M D+G  PN 
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY----VGRVEEAYE 211
            T+T++V     +G+L  ALE +  M   G + N + Y+ LL+G       +   EE+  
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711

Query: 212 MLMNVKN------DGLKPDVYTYTAVMDG--------FCKVGRSNEAMELLNEAIERGVT 257
             + ++       + L   V      + G         CK GR++E+ +L+   +ERGV 
Sbjct: 712 SDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVF 771

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
                 + +   YC +    K + L+ L+ K   +P   S+  ++ GL K G    A  +
Sbjct: 772 LE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERAREL 830

Query: 318 FKEMV 322
             E++
Sbjct: 831 VMELL 835



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/269 (20%), Positives = 113/269 (42%), Gaps = 27/269 (10%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I++  +     I + +K  G   +V  +  ++  L      E A K  S     G++PN 
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR---------- 170
            T+++M++ Y N      A + +  M + GY  N   ++ L+     S +          
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711

Query: 171 ------------LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
                       + E + V++Q+G  GC   +  +  L+  LC  GR +E+ +++ NV  
Sbjct: 712 SDIALRETDPECINELISVVEQLG--GCISGLCIF--LVTRLCKEGRTDESNDLVQNVLE 767

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            G+  +      +M+ +C   +  + MEL+   ++ G  P+  +F  +  G  KEG   +
Sbjct: 768 RGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAER 826

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
              L+  +   N + +K    T +  L++
Sbjct: 827 ARELVMELLTSNGVVEKSGVLTYVECLME 855


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 203/392 (51%), Gaps = 8/392 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+E + + + +++ G   ++  +N L+ AL  L+    A     +    G APN  
Sbjct: 69  RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 128

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ ++  +C + +  +ARK++  M   G  PNV T++ L++ LCKS +  EA EVL++M
Sbjct: 129 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 188

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TY+ L+ GLC   ++EEA +ML  +   G  PDV  Y++++  FCK G+ 
Sbjct: 189 KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 248

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYST 300
            EA + L E  ++  +P+VVT+NT+ +G CK G   +   +L  M++  + LPD ++YST
Sbjct: 249 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYST 308

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++NGL K   +  A  +   M + G   D     +++ GLC         LE+A  + + 
Sbjct: 309 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR-----LEEAEYLLQG 363

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +     +  TY  +I  L K +K DEA   +      G  P  +T+N ++  LC  G+
Sbjct: 364 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 423

Query: 421 IDKALLLLFLMYEHAK--IPSRTSYDMLITKL 450
           I +A  L+  M +      P   +Y  ++  L
Sbjct: 424 IKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 455



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 197/379 (51%), Gaps = 6/379 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
            D ++  G + +V  +  L+ A     + E A+K   E    G  PN  T+++++   C 
Sbjct: 45  MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 104

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
            +    A+ V+  M + G+ PNV TF  LV+  CK G + +A ++L  M   G +PN+ T
Sbjct: 105 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 164

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y+ L+ GLC   +  EA E+L  +K  G+ PD +TY+A++ G CK  +  EA ++L    
Sbjct: 165 YSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 224

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
             G TP+VV ++++ + +CK G  ++    L+ M+K+   PD ++Y+T+++GL K GKI 
Sbjct: 225 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 284

Query: 313 PAVSIFKEMVRFGFEV-DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
            A  I  +M   G  + D    ++++ GLC     + D+L +A ++ ++M K     D  
Sbjct: 285 EAQVILDQMQESGDVLPDVVTYSTVINGLC-----KSDMLVEAQKLLDRMCKAGCNPDVV 339

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L K  + +EA   L      G  P  +T+  +I  LC   K+D+A  ++  M
Sbjct: 340 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 399

Query: 432 YEHAKIPSRTSYDMLITKL 450
                 P+  +Y+ ++  L
Sbjct: 400 RNAGCPPNLVTYNTMVNGL 418



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 191/372 (51%), Gaps = 9/372 (2%)

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
            A++   E  S G AP+++T + +I    N  D   A   +D +   G  PNV T+T L+
Sbjct: 8   AALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALI 64

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
            +  ++ +L+EA+++L++M   GC PN+ TYN L+  LC +  V  A +++  +   G  
Sbjct: 65  AAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFA 124

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P+V T+ +++DGFCK G  ++A +LL   + +G+ PNVVT++ L +G CK    ++   +
Sbjct: 125 PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 184

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L+ MK     PD  +YS L++GL K  KI  A  + + M   G   D  + +S++   C 
Sbjct: 185 LEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC- 243

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
           KS +   LLE A +  ++M K+    D  TY  VI  L K  K  EA + L    E G +
Sbjct: 244 KSGK---LLE-AQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299

Query: 403 -PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P  +T++ VI  LC    + +A  LL  M +    P   +Y  +I  L +  +  +A  
Sbjct: 300 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEY 359

Query: 462 LYGAALKQGVIP 473
           L     + G  P
Sbjct: 360 LLQGMKRAGCAP 371



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 140/263 (53%), Gaps = 3/263 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++E   +   +   G    V  ++ ++ A     +   A K   E      +P+  
Sbjct: 209 KADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVV 268

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T++ +I   C      EA+ ++D M ++G   P+V T++ ++N LCKS  L EA ++LD+
Sbjct: 269 TYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDR 328

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + GC P++ TY  ++ GLC  GR+EEA  +L  +K  G  P+V TYT ++ G CK  +
Sbjct: 329 MCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARK 388

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK--KRNCLPDKISY 298
            +EA  ++ E    G  PN+VT+NT+ NG C  G   +   L++ MK  +  C PD  +Y
Sbjct: 389 VDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATY 448

Query: 299 STLLNGLLKWGKIRPAVSIFKEM 321
            T++N L+    ++ A  + ++M
Sbjct: 449 RTIVNALMSSDLVQEAEQLLEQM 471



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 134/341 (39%), Gaps = 73/341 (21%)

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVY--------------------------------TY 228
           C  G +  A E+L  +K+ G  PD +                                TY
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTY 60

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGV-------------------------------- 256
           TA++  F +  +  EAM+LL E  ERG                                 
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120

Query: 257 ---TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
               PNV+TFN+L +G+CK G       LL +M  +   P+ ++YS L++GL K  K   
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A  + +EM   G   D    ++L+ GLC     + D +E+A Q+  +M       D   Y
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLC-----KADKIEEAEQMLRRMAGSGCTPDVVVY 235

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             +I    K  K  EA   L    +    P  +T+N VI  LC  GKI +A ++L  M E
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE 295

Query: 434 HAKI-PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              + P   +Y  +I  L + +   +A  L     K G  P
Sbjct: 296 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 336


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 201/377 (53%), Gaps = 5/377 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F    K G   +V+ FN L+      N  E A++  ++   YG  P++ T++ ++   
Sbjct: 197 EVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTAL 256

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C ++   + R ++  M ++G  PN  T+ ILV+  CK   LKEA EV++ M   G  P++
Sbjct: 257 CKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDV 316

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN +++GLC  G+++EA  +   +++  L PDV TY  ++DG  +   S+ A +L+ E
Sbjct: 317 WTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEE 376

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
              RGV  N VT N +   +C EG   +   ++  M +    PD  +Y+T++NG  K GK
Sbjct: 377 MKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGK 436

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A  +  EM R G ++D   +N+LL  +C+    EK  L+DAY +  K  K+  + D 
Sbjct: 437 MAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCL----EKQ-LDDAYTLTMKARKRGYILDE 491

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TYG +I    K ++ D AL       E G +   IT+N +I+ LC  GK D+A+  L  
Sbjct: 492 VTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNE 551

Query: 431 MYEHAKIPSRTSYDMLI 447
           + E   +P  ++ +++I
Sbjct: 552 LLEKGLVPDESTSNIII 568



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 207/405 (51%), Gaps = 8/405 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAV---KFFSEASSYGLAPNSWTFSIMIR 128
           IF+ +K+     ++   N LL ALV  N   + V   + F +A   G+ PN  TF+I+I 
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIH 219

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
            YC+ N+  EA ++I+ M + G  P+  T+  ++ +LCK  +L +  ++L QM   G  P
Sbjct: 220 GYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFP 279

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N  TYN L+ G C +  ++EA E++  +   G+ PDV+TY  ++ G C  G+ +EA+ L 
Sbjct: 280 NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLR 339

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           ++     + P+VVT+NTL +G  +         L++ MK R    + ++++ ++      
Sbjct: 340 DKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTE 399

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           GKI  A ++  +MV  GF  D    N+++ G C     +   + +AY++ ++M +K    
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYC-----KAGKMAEAYKMMDEMGRKGLKL 454

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  T   ++ T+   K+ D+A      A + G+I   +T+  +I     + + D+AL L 
Sbjct: 455 DTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLW 514

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M E   + +  +Y+ +I  L    K+  A       L++G++P
Sbjct: 515 EEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVP 559



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 187/398 (46%), Gaps = 16/398 (4%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+         + A K   E  + G+  N  T +IMI+ +C +    EA  V+ 
Sbjct: 351 VVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMV 410

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M ++G+ P+  T+  ++N  CK+G++ EA +++D+MGR G K +  T N LL  +C   
Sbjct: 411 KMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEK 470

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           ++++AY + M  +  G   D  TY  ++ G+ K  +++ A++L  E  E G+   ++T+N
Sbjct: 471 QLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYN 530

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           T+  G C  G   + V  L  + ++  +PD+ + + +++G    G +  A     +MV  
Sbjct: 531 TIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEH 590

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             + D    N LLRGLC      + +LE    +F     K    D  TY I+I +  K +
Sbjct: 591 SLKPDIFTCNILLRGLC-----REGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKER 645

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK-------I 437
           + ++A   +         P   T+N ++  L   G+ ++A  L     E  +        
Sbjct: 646 RLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTS 705

Query: 438 PSRTSYDML----ITKLDQLEKSYDACALYGAALKQGV 471
           P   + DM+    I+ L    K  DA  L+  A ++GV
Sbjct: 706 PELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGV 743



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 152/336 (45%), Gaps = 16/336 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E   + D + + G        N LL  + +  + + A     +A   G   +  
Sbjct: 433 KAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEV 492

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I  Y        A K+ + M + G    + T+  ++  LC SG+  +A++ L+++
Sbjct: 493 TYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNEL 552

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  T N ++ G C+ G VE+A++    +    LKPD++T   ++ G C+ G  
Sbjct: 553 LEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGML 612

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            + + L N  I +G   + VT+N + + +CKE        L+  M+ +N  PD+ +Y+ +
Sbjct: 613 EKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAI 672

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEV-----------DERMMNSLLRGLCMKSWEEKDL 350
           + GL K G+   A  +  +    G +V            + M +  +  LC +       
Sbjct: 673 VTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQG-----K 727

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
            +DA ++F++  +K    +  TY  ++  L K +K+
Sbjct: 728 YKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKS 763



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 46/263 (17%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +++ +K+ G   ++  +N ++  L +  + + AV   +E    GL P+  T +I+I  
Sbjct: 511 LKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHG 570

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC +    +A +  + M ++   P++ T  IL+  LC+ G L++ L + +     G   +
Sbjct: 571 YCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMD 630

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS-------- 241
             TYN ++   C   R+E+A++++  ++   L+PD YTY A++ G  K GR+        
Sbjct: 631 TVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLAL 690

Query: 242 --------------------------------------NEAMELLNEAIERGVTPNVVTF 263
                                                  +AM+L  +A ++GV+ N  T+
Sbjct: 691 KFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTY 750

Query: 264 NTLFNGYCKEGTPMKGVGLLKLM 286
             L +G  K         LL  M
Sbjct: 751 IKLMDGLLKRRKSFTTTSLLPFM 773



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 43/223 (19%)

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV---SIFK 319
            +T    Y     P  G  +   MK+    P+ ++ +TLLN L++       V    +F+
Sbjct: 141 LDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQ 200

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           + V+ G + +    N L+ G C       +  E+A ++  +M +     D  TY  V+  
Sbjct: 201 DAVKLGVQPNVNTFNILIHGYC-----SDNNTEEALRLINQMGEYGCCPDNVTYNTVLTA 255

Query: 380 LGK---------------------GKKTDEALIH-------LHHAIEM-------GHIPR 404
           L K                      + T   L+H       L  A E+       G +P 
Sbjct: 256 LCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPD 315

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             T+N +++ LC EGKID+A+ L   M     +P   +Y+ LI
Sbjct: 316 VWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLI 358


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 202/408 (49%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +   +   G    V  +N +L  L M        +   E       PN  TF+ 
Sbjct: 208 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C    F    +V+  M ++G  P++  +  +++ +CK G L+ A E+L++M   G
Sbjct: 268 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 327

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KPN+  YN LLKGLC   R EE  E+L  + +     D  T+  ++D FC+ G  +  +
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 387

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL + +ERG  P+V+T+ T+ NG+CKEG   + V LLK M    C P+ ISY+ +L GL
Sbjct: 388 ELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 447

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
               +   A  +  +M++ G  ++    N+L+  LC     +K L+E A ++ ++M    
Sbjct: 448 CSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC-----KKGLVEQAIELLKQMLVNG 502

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  +Y  VI  LGK  KTDEAL  L+  +  G  P TI ++++  AL  EG+I+K +
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 562

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   + +         Y+ +I+ L +  ++  A       +  G +P
Sbjct: 563 QMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 610



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 190/384 (49%), Gaps = 10/384 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++       + E+A +    A++  + PN++T+  ++R  C +    +A  V+D M 
Sbjct: 93  YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P    + +++ + C+ G  + A+ VL+ +   GC  ++   N +L  +C  G V+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  +L ++ + G +PDV +Y AV+ G C   R     EL+ E +     PN+VTFNTL 
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +  C+ G   +   +L  M +  C PD   Y+T+++G+ K G +  A  I   M  +G +
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 328 VDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
            +    N+LL+GLC  + WEE +      ++  +M  K    D  T+ I++    +    
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETE------ELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 383

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D  +  L   +E G +P  IT+  VI   C EG ID+A++LL  M      P+  SY ++
Sbjct: 384 DRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 443

Query: 447 ITKLDQLEKSYDACALYGAALKQG 470
           +  L   E+  DA  L    ++QG
Sbjct: 444 LKGLCSAERWVDAEDLMSQMIQQG 467



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 157/326 (48%), Gaps = 8/326 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I + +   G   +V  +N LL  L      E   +  +E        +  TF+I++  +
Sbjct: 318 EILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFF 377

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C         ++++ M + G  P+V T+T ++N  CK G + EA+ +L  M   GCKPN 
Sbjct: 378 CQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNT 437

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  +LKGLC   R  +A +++  +   G   +  T+  +++  CK G   +A+ELL +
Sbjct: 438 ISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 497

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G +P++++++T+ +G  K G   + + LL +M  +   P+ I YS++ + L + G+
Sbjct: 498 MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 557

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I   + +F  +       D  + N+++  LC +   E+     A +    M     V + 
Sbjct: 558 INKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER-----AIEFLAYMVSSGCVPNE 612

Query: 371 GTYGIVIRTL---GKGKKTDEALIHL 393
            TY I+IR L   G  K+  E L  L
Sbjct: 613 STYTILIRGLASEGFVKEAQEMLTEL 638



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 134/269 (49%), Gaps = 8/269 (2%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            VDR+        I++ + + + G    V  +  ++         + AV      ++ G 
Sbjct: 382 LVDRV--------IELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 433

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            PN+ +++I+++  C+   + +A  ++  M   G   N  TF  L+N LCK G +++A+E
Sbjct: 434 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 493

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +L QM   GC P++ +Y+ ++ GL   G+ +EA E+L  + N G+ P+   Y+++     
Sbjct: 494 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 553

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + GR N+ +++ +   +  +  + V +N + +  CK G   + +  L  M    C+P++ 
Sbjct: 554 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 613

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +Y+ L+ GL   G ++ A  +  E+   G
Sbjct: 614 TYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 132/296 (44%), Gaps = 13/296 (4%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+ SLC +GR  EA   L   G       +  YN ++ G C  G++E A  +   V    
Sbjct: 64  LIRSLCAAGRTAEAARALSAAGG---GAGVVAYNAMVAGYCRAGQLESARRLAAAVP--- 117

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + P+ YTY  V+   C  GR  +A+ +L+E   RG  P    ++ +    C+ G     V
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +L+ +  R C  D  + + +LN +   G +  A+ + +++  FG E D    N++L+GL
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 237

Query: 341 CM-KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           CM K W          ++ E+M +     +  T+  +I  L +    +     L   +E 
Sbjct: 238 CMAKRW------GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH 291

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
           G  P    +  +I  +C EG ++ A  +L  M  +   P+   Y+ L+  L   E+
Sbjct: 292 GCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAER 347


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 202/403 (50%), Gaps = 13/403 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +  + ++ GT   V  +N L+       + + A +  +   S  +AP+++T++ +IR  C
Sbjct: 131 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIA---SMPVAPDAYTYTPIIRGLC 187

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           ++    EA  ++D M   G  P+V T+T+L+ ++CKS    +A+EVLD+M   GC PNI 
Sbjct: 188 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 247

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN ++ G+C  GRV++A E L  + + G +PD  +YT V+ G C   R  +  EL  E 
Sbjct: 248 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 307

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +E+   PN VTF+ L   +C+ G   + + +L+ M    C  +    + ++N + K G++
Sbjct: 308 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 367

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
             A      M  +G   D     ++L+GLC  + W      EDA ++ ++M +K    + 
Sbjct: 368 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW------EDAKELLKEMVRKNCPPNE 421

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            T+   I  L +    ++A + +    E G     +T+N ++   C +G++D AL L + 
Sbjct: 422 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 481

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M      P+  +Y  L+T L   E+   A  L    L++   P
Sbjct: 482 M---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP 521



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 205/413 (49%), Gaps = 8/413 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K++   + +++ D ++  G   ++  +N ++  +      + A +F +  SSYG  P++ 
Sbjct: 223 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 282

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +++  C    + +  ++   M +    PN  TF +LV   C+ G ++ A++VL+QM
Sbjct: 283 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 342

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  N    N ++  +C  GRV++A++ L N+ + G  PD  +YT V+ G C+  R 
Sbjct: 343 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 402

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A ELL E + +   PN VTFNT     C++G   +   L++ M +  C  + ++Y+ L
Sbjct: 403 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 462

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG    G++  A+ +F  M     + +     +LL GLC       + L+ A ++  +M
Sbjct: 463 VNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLC-----NAERLDAAAELLAEM 514

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K    +  T+ +++    +    DEA+  +   +E G  P  IT+N ++  +  +   
Sbjct: 515 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 574

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           ++AL LL  +  +   P   +Y  +I  L + ++  +A  ++      G+ P+
Sbjct: 575 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPK 627



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 196/406 (48%), Gaps = 8/406 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + + D +   G   SV  +  LL A+        A++   E  + G  PN  T++++I
Sbjct: 194 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 253

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    +AR+ ++ +   G+ P+  ++T ++  LC + R ++  E+  +M    C 
Sbjct: 254 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 313

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  T++ L++  C  G VE A ++L  +   G   +      V++  CK GR ++A + 
Sbjct: 314 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 373

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           LN     G +P+ +++ T+  G C+         LLK M ++NC P++++++T +  L +
Sbjct: 374 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 433

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G I  A  + ++M   G EV+    N+L+ G C++       ++ A ++F  M  K + 
Sbjct: 434 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR-----VDSALELFYSMPCKPNT 488

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
               TY  ++  L   ++ D A   L   ++    P  +TFN ++   C +G +D+A+ L
Sbjct: 489 I---TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIEL 545

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +  M EH   P+  +Y+ L+  + +   S +A  L    +  GV P
Sbjct: 546 VEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSP 591



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 167/336 (49%), Gaps = 10/336 (2%)

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A +++D     G  P+V   T L+ +LC+ GR  +A  VL    R G   ++  YN L+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           G C  G+++ A  ++ ++    + PD YTYT ++ G C  GR  EA+ LL++ + RG  P
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           +VVT+  L    CK     + + +L  M+ + C P+ ++Y+ ++NG+ + G++  A    
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 319 KEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             +  +GF+ D     ++L+GLC  K W      ED  ++F +M +K  + +  T+ +++
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRW------EDVEELFAEMMEKNCMPNEVTFDMLV 323

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
           R   +G   + A+  L      G    T   N VI  +C +G++D A   L  M  +   
Sbjct: 324 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 383

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P   SY  ++  L + E+  DA  L    +++   P
Sbjct: 384 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 419



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 169/349 (48%), Gaps = 8/349 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A +    A+S G AP+ +  + +IR  C +    +A +V+     +G   +V  +  LV 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             C+ G+L  A  ++  M      P+  TY  +++GLC  GRV EA  +L ++ + G +P
Sbjct: 153 GYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            V TYT +++  CK     +AME+L+E   +G TPN+VT+N + NG C+EG        L
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             +      PD +SY+T+L GL    +      +F EM+      +E   + L+R  C  
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFC-- 327

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                 ++E A QV E+M+      +     IVI T+ K  + D+A   L++    G  P
Sbjct: 328 ---RGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 384

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            TI++  V++ LC   + + A  LL  M      P+  +++  I  L Q
Sbjct: 385 DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 433



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 22/291 (7%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + + + + G   ++  +N L+    +    ++A++ F    S    PN+ T++ ++   C
Sbjct: 443 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFY---SMPCKPNTITYTTLLTGLC 499

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N      A +++  M      PNV TF +LV+  C+ G + EA+E+++QM   GC PN+ 
Sbjct: 500 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 559

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN LL G+      EEA E+L  + ++G+ PD+ TY++++    +  R  EA+++ +  
Sbjct: 560 TYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 619

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            + G+ P  V +N +    CK       +     M    C+P++++Y TL+ GL      
Sbjct: 620 QDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL------ 673

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
             A   F +  R            LLR LC +    K+LLE+    F   T
Sbjct: 674 --ANEDFLKETR-----------DLLRELCSRGVLNKNLLEEWRPKFSNQT 711



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 130/268 (48%), Gaps = 5/268 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN  +  L      E A     + S +G   N  T++ ++  +C +     A   ++  +
Sbjct: 424 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFY 480

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                PN  T+T L+  LC + RL  A E+L +M +  C PN+ T+N L+   C  G ++
Sbjct: 481 SMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 540

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA E++  +   G  P++ TY  ++DG  K   S EA+ELL+  +  GV+P++VT++++ 
Sbjct: 541 EAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 600

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
               +E    + + +  +++     P  + Y+ +L  L K      A+  F  MV  G  
Sbjct: 601 GVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCM 660

Query: 328 VDERMMNSLLRGLCMKSW--EEKDLLED 353
            +E    +L+ GL  + +  E +DLL +
Sbjct: 661 PNELTYITLIEGLANEDFLKETRDLLRE 688



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 8/233 (3%)

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           S  A  L++ A  RG  P+V     L    C+ G       +L+  ++     D  +Y+T
Sbjct: 90  SPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 149

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+ G  ++G++  A  +   M       D      ++RGLC     ++  + +A  + + 
Sbjct: 150 LVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLC-----DRGRVGEALSLLDD 201

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +       TY +++  + K     +A+  L      G  P  +T+N +I  +C EG+
Sbjct: 202 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 261

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +D A   L  +  +   P   SY  ++  L   ++  D   L+   +++  +P
Sbjct: 262 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 314



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 73/156 (46%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E I++ + + + G   ++  +N LL  +      E A++      S G++P+  T+S 
Sbjct: 539 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 598

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I     ++   EA K+   + D G  P    +  ++ +LCK      A++    M   G
Sbjct: 599 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 658

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           C PN  TY  L++GL     ++E  ++L  + + G+
Sbjct: 659 CMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 8/185 (4%)

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
           T  +   L+     R   PD    + L+  L + G+   A  + +   R G  VD    N
Sbjct: 89  TSPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 148

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           +L+ G C         L+ A ++   M       D  TY  +IR L    +  EAL  L 
Sbjct: 149 TLVAGYCRYGQ-----LDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLD 200

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
             +  G  P  +T+  +++A+C      +A+ +L  M      P+  +Y+++I  + +  
Sbjct: 201 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 260

Query: 455 KSYDA 459
           +  DA
Sbjct: 261 RVDDA 265


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 207/388 (53%), Gaps = 5/388 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ DF  +L A+  +N+ +  +  F +  + G++ + ++F+I+I C+C  + F  A  ++
Sbjct: 614 SIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALL 673

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G+ P++ T   L+N  C+  R +EA+ ++D M  +G +PN+  YN ++ GLC  
Sbjct: 674 GKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKN 733

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
             +  A E+   ++  G+  D  TY  ++ G C  GR  +A  LL + ++R + PNV+ F
Sbjct: 734 RDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFF 793

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             L + + KEG  ++   L K M +R+  P+ ++Y++L+NG    G++  A  +F  MV 
Sbjct: 794 TALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVS 853

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D    N+L+ G C     +   +ED  ++F +MT +  V D  TY  +I    + 
Sbjct: 854 KGCFPDVVTYNTLITGFC-----KSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQA 908

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            K + A    +  ++ G  P  +T+N ++  LC  GKI+KAL+++  + ++       +Y
Sbjct: 909 GKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITY 968

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGV 471
           +++I  + + +K  +A  L+ +  ++GV
Sbjct: 969 NIIIQGMCRNDKVKEAWCLFRSLTRKGV 996



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 205/445 (46%), Gaps = 41/445 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            ++ +D+F  + +     SV DF  LL A+  L   ET + F  +   +G++ + ++F+I
Sbjct: 46  FEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTI 105

Query: 126 MIRCYCN-----------------------------------KNDFFEARKVIDCMFDNG 150
           +I C+C                                    +N   +A  ++  M  +G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG-CKPNIQTYNCLLKGLCYVGRVEEA 209
           Y PNV  +  L++ LCK+G +  ALE+L++M + G    ++ TYN LL GLCY G   +A
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             +L ++    + PDV+T+TA++D F K G  +EA EL  + ++  + PN VT+N+L NG
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            C  G          LM  + C P+ ++Y+TL+NG  K  ++   + +F+ M R G   D
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N+L+ G C     +   L  A  +F  M       D  T+ I++  L    +   A
Sbjct: 346 TFTYNTLIHGYC-----QVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSA 400

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           ++  +           + +N +I  LC   K+++A  L   +      P   +Y ++I  
Sbjct: 401 MVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILG 460

Query: 450 LDQLEKSYDACALYGAALKQGVIPQ 474
           L +     +A  L+    + G+I Q
Sbjct: 461 LCKNGPRREADELFRRMKEDGIICQ 485



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 142/280 (50%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K   L   ++IF  ++K G       +N L+  L        A +   +     + PN  
Sbjct: 732  KNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVI 791

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
             F+ +I  +  + +  EA+ +   M     HPN+ T+  L+N  C  GRL +A  + D M
Sbjct: 792  FFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLM 851

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               GC P++ TYN L+ G C   RVE+  ++   + + GL  D +TY  ++ G+C+ G+ 
Sbjct: 852  VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKL 911

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            N A ++ N  ++ GV P++VT+N L +  C  G   K + +++ ++K     D I+Y+ +
Sbjct: 912  NVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNII 971

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
            + G+ +  K++ A  +F+ + R G ++D     +++ GLC
Sbjct: 972  IQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLC 1011



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 162/328 (49%), Gaps = 5/328 (1%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            + +  +E + + DS+ + G   +V  +N ++  L    +   A++ F      G+  ++ 
Sbjct: 697  QGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAV 756

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T++ +I   CN   + +A +++  M      PNV  FT L+++  K G L EA  +  +M
Sbjct: 757  TYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEM 816

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             R    PNI TYN L+ G C  GR+ +A  M   + + G  PDV TY  ++ GFCK  R 
Sbjct: 817  IRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 876

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             + M+L  E   +G+  +  T+NTL +GYC+ G       +   M      PD ++Y+ L
Sbjct: 877  EDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNIL 936

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            L+ L   GKI  A+ + +++ +   +VD    N +++G+C       D +++A+ +F  +
Sbjct: 937  LDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMC-----RNDKVKEAWCLFRSL 991

Query: 362  TKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
            T+K    D   Y  +I  L +     EA
Sbjct: 992  TRKGVKLDAIAYITMISGLCRNGLRREA 1019



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 156/359 (43%), Gaps = 6/359 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           + S L   + I   + K G + S+  F  LL    + N    A    +     G  PN  
Sbjct: 112 RCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVV 171

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            ++ +I C C   D   A ++++ M   G    ++ T+  L+  LC SG  ++A  +L  
Sbjct: 172 VYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRD 231

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M +    P++ T+  L+      G ++EA E+   +    + P+  TY ++++G C  GR
Sbjct: 232 MTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGR 291

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A +  +    +G  PNVVT+NTL NG+CK      G+ L + M +   + D  +Y+T
Sbjct: 292 LYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNT 351

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G  + GK+R A  IF  MV  G   D      LL GLC+        +  A   F  
Sbjct: 352 LIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGE-----IGSAMVKFND 406

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           M           Y I+I  L K  K +EA          G  P   T+  +I  LC  G
Sbjct: 407 MRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNG 465



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 144/307 (46%), Gaps = 8/307 (2%)

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           S R ++AL++  +M +    P++  +  LL  +  + R E        ++  G+  D+Y+
Sbjct: 43  SIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYS 102

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           +T ++  FC+  R + A+ +L + ++ G  P++VTF +L +G+C          L+  M 
Sbjct: 103 FTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMV 162

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG-FEVDERMMNSLLRGLCMKS-W 345
           K    P+ + Y+TL++ L K G +  A+ +  EM + G    D    N+LL GLC    W
Sbjct: 163 KSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEW 222

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            +      A ++   MTK+    D  T+  +I    K    DEA       ++    P T
Sbjct: 223 RQ------AARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           +T+N++I  LC  G++  A     LM      P+  +Y+ LI    +  +  D   L+  
Sbjct: 277 VTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQR 336

Query: 466 ALKQGVI 472
             ++G++
Sbjct: 337 MYREGLV 343



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 118/235 (50%)

Query: 104  AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
            A   + E     + PN  T++ +I  +C +    +A+ + D M   G  P+V T+  L+ 
Sbjct: 809  AKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLIT 868

Query: 164  SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
              CKS R+++ +++  +M   G   +  TYN L+ G C  G++  A ++   + + G+ P
Sbjct: 869  GFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPP 928

Query: 224  DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            D+ TY  ++D  C  G+  +A+ ++ +  +  +  +++T+N +  G C+     +   L 
Sbjct: 929  DIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLF 988

Query: 284  KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            + + ++    D I+Y T+++GL + G  R A  +   M   GF   ER+ +  LR
Sbjct: 989  RSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLR 1043



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 113/242 (46%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            +K   L E  +++  + +   + ++  +N L+    +      A   F    S G  P+ 
Sbjct: 801  VKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDV 860

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             T++ +I  +C      +  K+   M   G   +  T+  L++  C++G+L  A +V ++
Sbjct: 861  VTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 920

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            M   G  P+I TYN LL  LC  G++E+A  M+ +++ + +  D+ TY  ++ G C+  +
Sbjct: 921  MVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDK 980

Query: 241  SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              EA  L      +GV  + + + T+ +G C+ G   +   L   MK+   +P +  Y  
Sbjct: 981  VKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDE 1040

Query: 301  LL 302
             L
Sbjct: 1041 TL 1042



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 1/242 (0%)

Query: 48  NPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        +D  +K   L E  +++  + +     +   +N L+  L M      A K
Sbjct: 238 NPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKK 297

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F   +S G  PN  T++ +I  +C      +  K+   M+  G   +  T+  L++  C
Sbjct: 298 TFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYC 357

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           + G+L+ A ++   M   G  P+I T+  LL GLC  G +  A     ++++      + 
Sbjct: 358 QVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIV 417

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            Y  ++ G CK  +  EA EL       GV P+  T+  +  G CK G   +   L + M
Sbjct: 418 AYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRM 477

Query: 287 KK 288
           K+
Sbjct: 478 KE 479



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/303 (22%), Positives = 130/303 (42%), Gaps = 40/303 (13%)

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           + ++A+ +   +      P +  +T V+    K+ + +  + L ++    G++ ++ +F 
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L + +C+       + LL  M K    P  ++  +LLNG  +  + + AVS+   M   
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL-GKG 383
           G E +  + N+++ GLC    + +D L +A ++F  M KK  V D  TY  +I  L   G
Sbjct: 715 GLEPNVVIYNTVINGLC----KNRD-LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG 769

Query: 384 KKTDEA--------------LIHLHHAIEM----GHI----------------PRTITFN 409
           + TD A              +I     I+     G++                P  +T+N
Sbjct: 770 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYN 829

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           ++I   C +G++  A  +  LM      P   +Y+ LIT   + ++  D   L+     Q
Sbjct: 830 SLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ 889

Query: 470 GVI 472
           G++
Sbjct: 890 GLV 892



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 77/160 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  +++ + +F  + ++G       +N L+     + +   A   FS   S G+ P+  
Sbjct: 323 KSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDII 382

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T  I++   C   +   A    + M     +  +  + I+++ LCK+ +++EA E+  ++
Sbjct: 383 THCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRL 442

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
              G KP+ +TY  ++ GLC  G   EA E+   +K DG+
Sbjct: 443 PVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 202/403 (50%), Gaps = 13/403 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +  + ++ GT   V  +N L+       + + A +  +   S  +AP+++T++ +IR  C
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIA---SMPVAPDAYTYTPIIRGLC 156

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           ++    EA  ++D M   G  P+V T+T+L+ ++CKS    +A+EVLD+M   GC PNI 
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN ++ G+C  GRV++A E L  + + G +PD  +YT V+ G C   R  +  EL  E 
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +E+   PN VTF+ L   +C+ G   + + +L+ M    C  +    + ++N + K G++
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
             A      M  +G   D     ++L+GLC  + W      EDA ++ ++M +K    + 
Sbjct: 337 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW------EDAKELLKEMVRKNCPPNE 390

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            T+   I  L +    ++A + +    E G     +T+N ++   C +G++D AL L + 
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 450

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M      P+  +Y  L+T L   E+   A  L    L++   P
Sbjct: 451 M---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP 490



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 205/413 (49%), Gaps = 8/413 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K++   + +++ D ++  G   ++  +N ++  +      + A +F +  SSYG  P++ 
Sbjct: 192 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +++  C    + +  ++   M +    PN  TF +LV   C+ G ++ A++VL+QM
Sbjct: 252 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 311

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  N    N ++  +C  GRV++A++ L N+ + G  PD  +YT V+ G C+  R 
Sbjct: 312 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 371

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A ELL E + +   PN VTFNT     C++G   +   L++ M +  C  + ++Y+ L
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 431

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG    G++  A+ +F  M     + +     +LL GLC       + L+ A ++  +M
Sbjct: 432 VNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLC-----NAERLDAAAELLAEM 483

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K    +  T+ +++    +    DEA+  +   +E G  P  IT+N ++  +  +   
Sbjct: 484 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNS 543

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           ++AL LL  +  +   P   +Y  +I  L + ++  +A  ++      G+ P+
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPK 596



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 171/342 (50%), Gaps = 10/342 (2%)

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           ++D  EA +++D     G  P+V   T L+ +LC+ GR  +A  VL    R G   ++  
Sbjct: 56  RDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFA 115

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN L+ G C  G+++ A  ++ ++    + PD YTYT ++ G C  GR  EA+ LL++ +
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 172

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
            RG  P+VVT+  L    CK     + + +L  M+ + C P+ ++Y+ ++NG+ + G++ 
Sbjct: 173 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 232

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
            A      +  +GF+ D     ++L+GLC  K W      ED  ++F +M +K  + +  
Sbjct: 233 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW------EDVEELFAEMMEKNCMPNEV 286

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           T+ +++R   +G   + A+  L      G    T   N VI  +C +G++D A   L  M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +   P   SY  ++  L + E+  DA  L    +++   P
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 195/406 (48%), Gaps = 8/406 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + + D +   G   SV  +  LL A+        A++   E  + G  PN  T++++I
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    +AR+ ++ +   G+ P+  ++T ++  LC + R ++  E+  +M    C 
Sbjct: 223 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 282

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  T++ L++  C  G VE A ++L  +   G   +      V++  CK GR ++A + 
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           LN     G +P+ +++ T+  G C+         LLK M ++NC P++++++T +  L +
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G I  A  + ++M   G EV+    N+L+ G C++       ++ A ++F  M  K + 
Sbjct: 403 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR-----VDSALELFYSMPCKPNT 457

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
               TY  ++  L   ++ D A   L   ++    P  +TFN ++   C +G +D+A+ L
Sbjct: 458 I---TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIEL 514

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +  M EH   P+  +Y+ L+  +     S +A  L    +  GV P
Sbjct: 515 VEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSP 560



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 175/364 (48%), Gaps = 8/364 (2%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N  L  L+  ++   A +    A+S G AP+ +  + +IR  C +    +A +V+     
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           +G   +V  +  LV   C+ G+L  A  ++  M      P+  TY  +++GLC  GRV E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +L ++ + G +P V TYT +++  CK     +AME+L+E   +G TPN+VT+N + N
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G C+EG        L  +      PD +SY+T+L GL    +      +F EM+      
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +E   + L+R  C        ++E A QV E+M+      +     IVI T+ K  + D+
Sbjct: 284 NEVTFDMLVRFFC-----RGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   L++    G  P TI++  V++ LC   + + A  LL  M      P+  +++  I 
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398

Query: 449 KLDQ 452
            L Q
Sbjct: 399 ILCQ 402



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 22/291 (7%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + + + + G   ++  +N L+    +    ++A++ F    S    PN+ T++ ++   C
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFY---SMPCKPNTITYTTLLTGLC 468

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N      A +++  M      PNV TF +LV+  C+ G + EA+E+++QM   GC PN+ 
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 528

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN LL G+      EEA E+L  + ++G+ PD+ TY++++    +  R  EA+++ +  
Sbjct: 529 TYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 588

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            + G+ P  V +N +    CK       +     M    C+P++++Y TL+ GL      
Sbjct: 589 QDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL------ 642

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
             A   F +  R            LLR LC +    K+LLE+    F   T
Sbjct: 643 --ANEDFLKETR-----------DLLRELCSRGVLNKNLLEEWRPKFSNKT 680



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 129/268 (48%), Gaps = 5/268 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN  +  L      E A     + S +G   N  T++ ++  +C +     A   ++  +
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFY 449

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                PN  T+T L+  LC + RL  A E+L +M +  C PN+ T+N L+   C  G ++
Sbjct: 450 SMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA E++  +   G  P++ TY  ++DG      S EA+ELL+  +  GV+P++VT++++ 
Sbjct: 510 EAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSII 569

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
               +E    + + +  +++     P  + Y+ +L  L K      A+  F  MV  G  
Sbjct: 570 GVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCM 629

Query: 328 VDERMMNSLLRGLCMKSW--EEKDLLED 353
            +E    +L+ GL  + +  E +DLL +
Sbjct: 630 PNELTYITLIEGLANEDFLKETRDLLRE 657



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 73/156 (46%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E I++ + + + G   ++  +N LL  +      E A++      S G++P+  T+S 
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSS 567

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I     ++   EA K+   + D G  P    +  ++ +LCK      A++    M   G
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           C PN  TY  L++GL     ++E  ++L  + + G+
Sbjct: 628 CMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 222/456 (48%), Gaps = 25/456 (5%)

Query: 38  STAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALV 96
           S  + L L  +  SL   RF  + +  + +   I  F+ + +     S  DFN LL ++ 
Sbjct: 13  SGTQMLSLLPHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIA 72

Query: 97  MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
            +    T +    +  S+G+ PN +T  I+I  +C+ N    A  V+  +   G+ P+  
Sbjct: 73  KMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTA 132

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           TFT L+  +C  G++ EAL + D+M   G +P++ TY  L+ GLC VG    A  +L ++
Sbjct: 133 TFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 192

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                +P+V+ Y  ++D  CK  +  EA  L +E + +G++P++ T+N+L +  C     
Sbjct: 193 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEW 252

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                LL  M     +PD +S++T+++ L K GK+  A  +  +M++ G E +     +L
Sbjct: 253 KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTAL 312

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL------ 390
           + G C+ S      +++A +VF+ M  K  + +  +Y  +I    K ++ D+A+      
Sbjct: 313 MDGHCLLSE-----MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLM 367

Query: 391 ------IHLHHAIEM-------GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
                 +++  A+++       G +P  I++N +I   C   +IDKA+ L   M     I
Sbjct: 368 DXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELI 427

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P   +Y  LI  L  +E+  DA AL+   +    IP
Sbjct: 428 PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 463



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 223/480 (46%), Gaps = 21/480 (4%)

Query: 1   MSSLVPSNSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDR 60
           M SL+P      + ++ R H+K   FN +     A  S    L ++  P ++   + +  
Sbjct: 17  MLSLLPH---FLSLSHNRFHSKSLHFNTI---DGAISSFNRMLRMQPPPSTVDFNKLLTS 70

Query: 61  I-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           I K       + +   +   G   ++   + L+ +   LN    A    ++    G  P+
Sbjct: 71  IAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPD 130

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           + TF+ +IR  C +    EA  + D M   G+ P+V T+  L+N LCK G    A+ +L 
Sbjct: 131 TATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLG 190

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M +  C+PN+  YN ++  LC   +V EA+ +   +   G+ PD++TY +++   C + 
Sbjct: 191 SMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLC 250

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
                  LLNE ++  + P+VV+FNT+ +  CKEG   +   ++  M +R   P+ ++Y+
Sbjct: 251 EWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYT 310

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL--------- 350
            L++G     ++  AV +F  MV  G   +    N+L+ G C     +K +         
Sbjct: 311 ALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXX 370

Query: 351 -----LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                +++A +VF+ M  K  + +  +Y  +I    K ++ D+A+           IP T
Sbjct: 371 CCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDT 430

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           +T++ +I  LC   ++  A+ L   M   ++IP+  +Y +L+  L +     +A AL  A
Sbjct: 431 VTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKA 490



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 184/414 (44%), Gaps = 61/414 (14%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +FD +  +G    V  +  L+  L  +     A++           PN + ++ 
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G  P++ T+  L+++LC     K    +L++M    
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ ++N ++  LC  G+V EA++++  +   G++P+V TYTA+MDG C +   +EA+
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK----------------- 288
           ++ +  + +G  PNV+++NTL NGYCK     K +    LM                   
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTM 386

Query: 289 --RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
             + C+P+ ISY+TL+NG  K  +I  A+ +F EM R     D    ++L+ GLC     
Sbjct: 387 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC----- 441

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
             + L+DA  +F +M     + +  TY I++  L K +   EA+  L  AIE  ++   I
Sbjct: 442 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLK-AIEGSNLDPDI 500

Query: 407 TFNNV------------------------------------IQALCGEGKIDKA 424
             NN+                                    I  LC  G +D+A
Sbjct: 501 QVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 554



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 194/408 (47%), Gaps = 49/408 (12%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +  S+ +     +V  +N ++ +L    +   A   FSE  + G++P+ +T++ +I  
Sbjct: 186 IRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHA 245

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            CN  ++     +++ M D+   P+V +F  +V++LCK G++ EA +V+D+M + G +PN
Sbjct: 246 LCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPN 305

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR--------- 240
           + TY  L+ G C +  ++EA ++   +   G  P+V +Y  +++G+CK+ R         
Sbjct: 306 VVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTX 365

Query: 241 ----------SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
                      +EA+++ +  + +G  PNV+++NTL NGYCK     K + L   M ++ 
Sbjct: 366 LMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 425

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------- 341
            +PD ++YSTL++GL    +++ A+++F EMV      +      LL  LC         
Sbjct: 426 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 485

Query: 342 --MKSWEEKDL-------------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
             +K+ E  +L                   LE A  +F  ++ K    D  TY I+I  L
Sbjct: 486 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 545

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            +    DEA        E G       +N + +      +  +A+ LL
Sbjct: 546 CRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLL 593



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 169/405 (41%), Gaps = 61/405 (15%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E +D K  P  +     VD + K   + E  D+ D + + G   +V  +  L+    +L+
Sbjct: 261 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLS 320

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN-------------------DFFEAR 140
           E + AVK F      G  PN  +++ +I  YC                      +  EA 
Sbjct: 321 EMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAV 380

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           KV D M   G  PNV ++  L+N  CK  R+ +A+ +  +M R    P+  TY+ L+ GL
Sbjct: 381 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 440

Query: 201 CYVGRVEEA------------------YEMLMN-----------------VKNDGLKPDV 225
           C+V R+++A                  Y +L++                 ++   L PD+
Sbjct: 441 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDI 500

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
                 +DG C+ G    A +L +    +G+ P+V T++ + NG C+ G   +   L + 
Sbjct: 501 QVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFRE 560

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M +  C  +   Y+T+  G L+  +   A+ + +EMV  GF  D   M      L +K  
Sbjct: 561 MDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMT-----LFVKML 615

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTD-PGTYGIVIRTLGKGKKTDEA 389
            +  L +   Q+     K +S  D   + G+ I   G   + +E+
Sbjct: 616 SDDGLDQSLKQILRNGCKWISTFDSSSSTGLHILQKGISHERNES 660


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 208/426 (48%), Gaps = 38/426 (8%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+         E A   F E  +  L P+  TF  +I   C       AR ++D M 
Sbjct: 570 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  PNV T+  LV+ LCKSGR++EA + L++M   GC P+  TY  L+  LC   R +
Sbjct: 630 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A +++  +K+ G  PD  TY  ++DG  K G++ +A+ +L E + +G  P+VVT+NTL 
Sbjct: 690 DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLI 749

Query: 268 NGYCKEGTPMKGVGLLKLMKKR---NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           +  CK G   +   L   M  R    C+P+ ++YS L+NGL K G+I  A  + +EM+R 
Sbjct: 750 DSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK 809

Query: 325 GFEVDERMM--NSLLRGLC-----------MKSWEEKDL--------------------- 350
             +V   ++  NS L GLC           M+S  +  L                     
Sbjct: 810 SCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 869

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
            ++A  VF+ M     V +  TY +++  L K  K + A   +   ++ G  P  IT++ 
Sbjct: 870 TDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSV 929

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY-GAALKQ 469
           ++ A C    +D+AL LL  M      P+  +++ +I  L + ++S +A  ++    LK 
Sbjct: 930 LVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKH 989

Query: 470 GVIPQR 475
           G+ P +
Sbjct: 990 GLAPDK 995



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 212/472 (44%), Gaps = 76/472 (16%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K++ L   +++F+ + + G +  V  +N L+ +L    + E A +   + SS    PN  
Sbjct: 228 KSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVV 287

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCM----------------FDNG--------------- 150
           T+S++I   C      EAR++I  M                F +G               
Sbjct: 288 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 347

Query: 151 --------YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
                     P+  TF+ L++ LCK G++ EA  V D M   G  PN+ TYN L+ GLC 
Sbjct: 348 SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 407

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
             ++E A+ M+ ++ + G+ PDV TY+ ++D FCK  R +EA+ELL+    RG TPNVVT
Sbjct: 408 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 467

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMK-KRNCLPDKISYSTL-------------------- 301
           FN++ +G CK     +   +   M  K   +PDKI+Y TL                    
Sbjct: 468 FNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM 527

Query: 302 -----------LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
                      +NGL K G +  A+ ++  M+      D+   N L+ G C     +   
Sbjct: 528 PDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGAC-----KAGN 582

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
            E A  +FE+M  K    D  T+G +I  L K  + + A   L     +G  P  +T+N 
Sbjct: 583 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 642

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           ++  LC  G+I++A   L  M     +P   +Y  L+  L +  ++ DA  L
Sbjct: 643 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQL 694



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 209/429 (48%), Gaps = 49/429 (11%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN  +  L  L +   A++ ++      L P+  TF+I+I   C   +F +A  + + M 
Sbjct: 535 FNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV 594

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                P+V TF  L++ LCK+G+++ A ++LD MG +G  PN+ TYN L+ GLC  GR+E
Sbjct: 595 AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIE 654

Query: 208 E-----------------------------------AYEMLMNVKNDGLKPDVYTYTAVM 232
           E                                   A +++  +K+ G  PD  TY  ++
Sbjct: 655 EACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILV 714

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK---KR 289
           DG  K G++ +A+ +L E + +G  P+VVT+NTL +  CK G   +   L   M     R
Sbjct: 715 DGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSR 774

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM--NSLLRGLCMKSWEE 347
            C+P+ ++YS L+NGL K G+I  A  + +EM+R   +V   ++  NS L GLC +S   
Sbjct: 775 CCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQS--- 831

Query: 348 KDLLEDAYQVFEKM---TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
             ++ +A ++   +   + +VS  D  T+  +I  L K  +TDEA       I  G++P 
Sbjct: 832 --MMAEACELMRSLRDGSLRVS-PDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPN 888

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            +T+N ++  LC   K+++A  ++  M +    P   +Y +L+    +     +A  L  
Sbjct: 889 VVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLH 948

Query: 465 AALKQGVIP 473
               +G  P
Sbjct: 949 GMASRGCTP 957



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 200/426 (46%), Gaps = 45/426 (10%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC---------- 129
           G   ++  FN  L  LV       A+  F         PN +T+S ++R           
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165

Query: 130 ------------------------YCNKNDFFEARKVIDC-MFDNGYHPNVTTFTILVNS 164
                                    C   +   A ++    M  +G  P + T+  ++N 
Sbjct: 166 TLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           LCKS  L   +E+ +++   G  P++ TYN L+  LC  G +EEA  +  ++ +    P+
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           V TY+ +++G CKVGR +EA EL+ E   +   V PN++T+N+  +G CK+    +   L
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 345

Query: 283 LKLMKKRN--CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           ++ ++  +    PD +++STL++GL K G+I  A S+F +M+  G+  +    N+L+ GL
Sbjct: 346 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGL 405

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     + D +E A+ + E M  K    D  TY +++    K  + DEAL  LH     G
Sbjct: 406 C-----KADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 460

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLM-YEHAKIPSRTSYDMLITKLDQLEKSYDA 459
             P  +TFN++I  LC   +  +A  +   M  +H  +P + +Y  LI  L +  ++  A
Sbjct: 461 CTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQA 520

Query: 460 CALYGA 465
            AL  A
Sbjct: 521 EALLDA 526



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 202/430 (46%), Gaps = 50/430 (11%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFF-SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           V+D+N +L +L    E   A++ F  E +  G+AP   T++ +I   C  N+     ++ 
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           + + + G+HP+V T+  L++SLCK+G L+EA  +   M    C PN+ TY+ L+ GLC V
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299

Query: 204 GRVEEAYEM------------------------------------LMNVKNDG---LKPD 224
           GR++EA E+                                    LM    DG   + PD
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 359

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
             T++ ++DG CK G+ +EA  + ++ I  G  PNV+T+N L NG CK     +   +++
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 419

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            M  +   PD I+YS L++   K  ++  A+ +   M   G   +    NS++ GLC   
Sbjct: 420 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC--- 476

Query: 345 WEEKDLLEDAYQVFEKMTKKVS-VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
             + D   +A+Q+F+ M  K   V D  TY  +I  L +  +  +A   L    +    P
Sbjct: 477 --KSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----P 530

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            T  FN  I  L   G + +AL +   M E   +P + ++++LI    +      A AL+
Sbjct: 531 DTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALF 590

Query: 464 GAALKQGVIP 473
              + + + P
Sbjct: 591 EEMVAKNLQP 600



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 200/437 (45%), Gaps = 46/437 (10%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            +AS   + + +   +K  G +     +N L+  L    + E A+    E    G  P+  
Sbjct: 684  RASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVV 743

Query: 122  TFSIMIRCYCNKNDFFEARKV---IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
            T++ +I   C   D  EAR++   +         PNV T+++L+N LCK GR+ EA E++
Sbjct: 744  TYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELI 803

Query: 179  DQMGRIGCK--PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK--PDVYTYTAVMDG 234
             +M R  C   PNI TYN  L GLC    + EA E++ ++++  L+  PD  T++ ++DG
Sbjct: 804  QEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDG 863

Query: 235  FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
             CK G+++EA  + ++ I  G  PNVVT+N L NG CK     +   +++ M  +   PD
Sbjct: 864  LCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPD 923

Query: 295  KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
             I+YS L++   K   +  A+ +   M   G   +    NS++ GLC     + D   +A
Sbjct: 924  VITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLC-----KSDQSGEA 978

Query: 355  YQVFEKMTKKVSVT------------------------------DPGTYGIVIRTLGKGK 384
            +Q+F+ MT K  +                               DP TY       G  K
Sbjct: 979  FQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSK 1038

Query: 385  KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
              D +   LH  +E+  +P  +TFN +I   C  G  ++A  L   M      P   ++ 
Sbjct: 1039 LGDVSRA-LHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFG 1097

Query: 445  MLI---TKLDQLEKSYD 458
             LI    K  Q+E ++D
Sbjct: 1098 ALIDGLCKAGQVEATWD 1114



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 196/407 (48%), Gaps = 15/407 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNS 120
           KAS + E +++   +   G   +V  FN ++  L   +    A + F + A  +GL P+ 
Sbjct: 442 KASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDK 501

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+  +I          +A  ++D M D    P+   F   +N L K G +  AL+V ++
Sbjct: 502 ITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNR 557

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M  +   P+  T+N L+ G C  G  E+A  +   +    L+PDV T+ A++DG CK G+
Sbjct: 558 MLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 617

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A ++L+     GV PNVVT+N L +G CK G   +    L+ M    C+PD I+Y +
Sbjct: 618 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 677

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+  L +  +   A+ +  E+  FG++ D    N L+ GL    W+     E A  V E+
Sbjct: 678 LVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL----WKSGQ-TEQAITVLEE 732

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEA-LIH--LHHAIEMGHIPRTITFNNVIQALCG 417
           M  K    D  TY  +I +L K    +EA  +H  +   +    +P  +T++ +I  LC 
Sbjct: 733 MVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCK 792

Query: 418 EGKIDKALLLLFLMYEHA--KIPSRTSYDMLITKLDQLEKSYDACAL 462
            G+ID+A  L+  M   +   +P+  +Y+  +  L +     +AC L
Sbjct: 793 VGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACEL 839



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 175/396 (44%), Gaps = 70/396 (17%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN-------------------- 189
           G+   + +F   +N L KSG   +A+++        C+PN                    
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165

Query: 190 --------------IQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDG 234
                         +  YN +L+ LC  G    A E+    +  DG+ P + TY  +++G
Sbjct: 166 TLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK       MEL  E +ERG  P+VVT+NTL +  CK G   +   L   M  R+C+P+
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM--NSLLRGLC----------- 341
            ++YS L+NGL K G+I  A  + +EM R   +V   ++  NS L GLC           
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 345

Query: 342 MKSWEEKDL---------------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M+S  +  L                     +++A  VF+ M     V +  TY  ++  L
Sbjct: 346 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGL 405

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K  K + A   +   ++ G  P  IT++ ++ A C   ++D+AL LL  M      P+ 
Sbjct: 406 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNV 465

Query: 441 TSYDMLITKLDQLEKSYDACALY-GAALKQGVIPQR 475
            +++ +I  L + ++S +A  ++   ALK G++P +
Sbjct: 466 VTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDK 501



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 135/276 (48%), Gaps = 9/276 (3%)

Query: 45   LKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET 103
            L+ +P ++     +D + K     E  ++FD +   G   +V  +N L+  L   ++ E 
Sbjct: 848  LRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMER 907

Query: 104  AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
            A          G+ P+  T+S+++  +C  +   EA +++  M   G  PNV TF  +++
Sbjct: 908  AHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIID 967

Query: 164  SLCKSGRLKEALEVLDQMG-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
             LCKS +  EA ++ D M  + G  P+  TY  L+ GL   G   +A E+L++   D   
Sbjct: 968  GLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQA-EVLLDAMPD--- 1023

Query: 223  PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
            PD Y +   ++G  K+G  + A   L+  +E  + P+ VTFN L  G CK G   +   L
Sbjct: 1024 PDTYAFNCCINGLSKLGDVSRA---LHRMLELELVPDKVTFNILIAGACKAGNFEQASAL 1080

Query: 283  LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
             + M  +N  PD +++  L++GL K G++     I 
Sbjct: 1081 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 202/403 (50%), Gaps = 13/403 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +  + ++ GT   V  +N L+       + + A +  +   S  +AP+++T++ +IR  C
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIA---SMPVAPDAYTYTPIIRGLC 156

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           ++    EA  ++D M   G  P+V T+T+L+ ++CKS    +A+EVLD+M   GC PNI 
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN ++ G+C  GRV++A E L  + + G +PD  +YT V+ G C   R  +  EL  E 
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +E+   PN VTF+ L   +C+ G   + + +L+ M    C  +    + ++N + K G++
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
             A      M  +G   D     ++L+GLC  + W      EDA ++ ++M +K    + 
Sbjct: 337 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW------EDAKELLKEMVRKNCPPNE 390

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            T+   I  L +    ++A + +    E G     +T+N ++   C +G++D AL L + 
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 450

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M      P+  +Y  L+T L   E+   A  L    L++   P
Sbjct: 451 M---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP 490



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 205/413 (49%), Gaps = 8/413 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K++   + +++ D ++  G   ++  +N ++  +      + A +F +  SSYG  P++ 
Sbjct: 192 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +++  C    + +  ++   M +    PN  TF +LV   C+ G ++ A++VL+QM
Sbjct: 252 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 311

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  N    N ++  +C  GRV++A++ L N+ + G  PD  +YT V+ G C+  R 
Sbjct: 312 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 371

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A ELL E + +   PN VTFNT     C++G   +   L++ M +  C  + ++Y+ L
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 431

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG    G++  A+ +F  M     + +     +LL GLC       + L+ A ++  +M
Sbjct: 432 VNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLC-----NAERLDAAAELLAEM 483

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K    +  T+ +++    +    DEA+  +   +E G  P  IT+N ++  +  +   
Sbjct: 484 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 543

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           ++AL LL  +  +   P   +Y  +I  L + ++  +A  ++      G+ P+
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPK 596



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 171/342 (50%), Gaps = 10/342 (2%)

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           ++D  EA +++D     G  P+V   T L+ +LC+ GR  +A  VL    R G   ++  
Sbjct: 56  RDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFA 115

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN L+ G C  G+++ A  ++ ++    + PD YTYT ++ G C  GR  EA+ LL++ +
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 172

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
            RG  P+VVT+  L    CK     + + +L  M+ + C P+ ++Y+ ++NG+ + G++ 
Sbjct: 173 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 232

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
            A      +  +GF+ D     ++L+GLC  K W      ED  ++F +M +K  + +  
Sbjct: 233 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW------EDVEELFAEMMEKNCMPNEV 286

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           T+ +++R   +G   + A+  L      G    T   N VI  +C +G++D A   L  M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +   P   SY  ++  L + E+  DA  L    +++   P
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 196/406 (48%), Gaps = 8/406 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + + D +   G   SV  +  LL A+        A++   E  + G  PN  T++++I
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    +AR+ ++ +   G+ P+  ++T ++  LC + R ++  E+  +M    C 
Sbjct: 223 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 282

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  T++ L++  C  G VE A ++L  +   G   +      V++  CK GR ++A + 
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           LN     G +P+ +++ T+  G C+         LLK M ++NC P++++++T +  L +
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G I  A  + ++M   G EV+    N+L+ G C++       ++ A ++F  M  K + 
Sbjct: 403 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR-----VDSALELFYSMPCKPNT 457

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
               TY  ++  L   ++ D A   L   ++    P  +TFN ++   C +G +D+A+ L
Sbjct: 458 I---TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIEL 514

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +  M EH   P+  +Y+ L+  + +   S +A  L    +  GV P
Sbjct: 515 VEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSP 560



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 175/364 (48%), Gaps = 8/364 (2%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N  L  L+  ++   A +    A+S G AP+ +  + +IR  C +    +A +V+     
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           +G   +V  +  LV   C+ G+L  A  ++  M      P+  TY  +++GLC  GRV E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +L ++ + G +P V TYT +++  CK     +AME+L+E   +G TPN+VT+N + N
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G C+EG        L  +      PD +SY+T+L GL    +      +F EM+      
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +E   + L+R  C        ++E A QV E+M+      +     IVI T+ K  + D+
Sbjct: 284 NEVTFDMLVRFFC-----RGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   L++    G  P TI++  V++ LC   + + A  LL  M      P+  +++  I 
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398

Query: 449 KLDQ 452
            L Q
Sbjct: 399 ILCQ 402



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 22/291 (7%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + + + + G   ++  +N L+    +    ++A++ F    S    PN+ T++ ++   C
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFY---SMPCKPNTITYTTLLTGLC 468

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N      A +++  M      PNV TF +LV+  C+ G + EA+E+++QM   GC PN+ 
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 528

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN LL G+      EEA E+L  + ++G+ PD+ TY++++    +  R  EA+++ +  
Sbjct: 529 TYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 588

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            + G+ P  V +N +    CK       +     M    C+P++++Y TL+ GL      
Sbjct: 589 QDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL------ 642

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
             A   F +  R            LLR LC +    K+LLE+    F   T
Sbjct: 643 --ANEDFLKETR-----------DLLRELCSRGVLNKNLLEEWRPKFSNQT 680



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 130/268 (48%), Gaps = 5/268 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN  +  L      E A     + S +G   N  T++ ++  +C +     A   ++  +
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFY 449

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                PN  T+T L+  LC + RL  A E+L +M +  C PN+ T+N L+   C  G ++
Sbjct: 450 SMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA E++  +   G  P++ TY  ++DG  K   S EA+ELL+  +  GV+P++VT++++ 
Sbjct: 510 EAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 569

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
               +E    + + +  +++     P  + Y+ +L  L K      A+  F  MV  G  
Sbjct: 570 GVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCM 629

Query: 328 VDERMMNSLLRGLCMKSW--EEKDLLED 353
            +E    +L+ GL  + +  E +DLL +
Sbjct: 630 PNELTYITLIEGLANEDFLKETRDLLRE 657



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 73/156 (46%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E I++ + + + G   ++  +N LL  +      E A++      S G++P+  T+S 
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 567

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I     ++   EA K+   + D G  P    +  ++ +LCK      A++    M   G
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           C PN  TY  L++GL     ++E  ++L  + + G+
Sbjct: 628 CMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 210/418 (50%), Gaps = 11/418 (2%)

Query: 38  STAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALV 96
           S  + L L  +  SL   RF  + +  + +   I  F+ + +     S  DFN LL ++ 
Sbjct: 13  SGTQMLSLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIA 72

Query: 97  MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC--NKNDFFEARKVIDCMFDNGYHPN 154
            +    T +    +  S+G+ PN +T  I+I  +C  N+    EA  + D M   G+ P+
Sbjct: 73  KMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPD 132

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
           V T+  L+N LCK G    A+ +L  M +  C+PN+  YN ++  LC   +V EA+ +  
Sbjct: 133 VVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFS 192

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +   G+ PD++TY +++   C +        LLNE ++  + P+VV+FNT+ +  CKEG
Sbjct: 193 EMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEG 252

Query: 275 TPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
              +   ++ K++++  C+P+ ISY+TL+NG  K  +I  A+ +F EM R     D    
Sbjct: 253 KVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTY 312

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           ++L+ GLC       + L+DA  +F +M     + +  TY I++  L K +   EA+  L
Sbjct: 313 STLIHGLC-----HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMA-L 366

Query: 394 HHAIEMGHIPRTITFNNV-IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             AIE  ++   I  NN+ I  +C  G+++ A  L   +      P   +Y ++I  L
Sbjct: 367 LKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 424



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 180/357 (50%), Gaps = 7/357 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +  S+ +     +V  +N ++ +L    +   A   FSE  + G++P+ +T++ +I  
Sbjct: 153 IRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHA 212

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKP 188
            CN  ++     +++ M D+   P+V +F  +V++LCK G++ EA +V+D+M  R GC P
Sbjct: 213 LCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMP 272

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N+ +YN L+ G C + R+++A  +   +    L PD  TY+ ++ G C V R  +A+ L 
Sbjct: 273 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 332

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +E +     PN+VT+  L +  CK     + + LLK ++  N  PD    +  ++G+ + 
Sbjct: 333 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRA 392

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G++  A  +F  +   G + D    + ++ GLC      + LL++A ++F +M +     
Sbjct: 393 GELEAARDLFSNLSSKGLQPDVWTYSIMINGLC-----RRGLLDEASKLFREMDENGCTL 447

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           +   Y  + R   +  +T  A+  L   +  G      T    ++ L  +G +D++L
Sbjct: 448 NGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG-LDQSL 503



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 146/304 (48%), Gaps = 10/304 (3%)

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A+   ++M R+   P+   +N LL  +  +        +   + + G+ P++YT   +++
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 234 GFCKV--GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
            FC +  G+  EA+ L ++ I  G  P+VVT+ TL NG CK G     + LL  M ++NC
Sbjct: 105 SFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNC 164

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDL 350
            P+  +Y+T+++ L K  ++  A ++F EMV  G   D    NSL+  LC +  W+    
Sbjct: 165 QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH--- 221

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH-IPRTITFN 409
                 +  +M     + D  ++  V+  L K  K  EA   +   I+ G  +P  I++N
Sbjct: 222 ---VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYN 278

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I   C   +IDKA+ L   M     IP   +Y  LI  L  +E+  DA AL+   +  
Sbjct: 279 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 338

Query: 470 GVIP 473
             IP
Sbjct: 339 SQIP 342



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 153/316 (48%), Gaps = 8/316 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV--GRVEEAY 210
           P+   F  L+ S+ K       L +  QM   G  PNI T + L+   C++  G++ EA 
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +  +G +PDV TY  +++G CKVG ++ A+ LL   +++   PNV  +NT+ +  
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK+    +   L   M  +   PD  +Y++L++ L    + +   ++  EMV      D 
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS-VTDPGTYGIVIRTLGKGKKTDEA 389
              N+++  LC     ++  + +A+ V +KM ++   + +  +Y  +I    K ++ D+A
Sbjct: 239 VSFNTVVDALC-----KEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKA 293

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           +           IP T+T++ +I  LC   ++  A+ L   M   ++IP+  +Y +L+  
Sbjct: 294 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 353

Query: 450 LDQLEKSYDACALYGA 465
           L +     +A AL  A
Sbjct: 354 LCKNRYLAEAMALLKA 369



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 143/329 (43%), Gaps = 37/329 (11%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P        +D + K   + E  ++F  +   G +  +  +N L+ AL  L E +     
Sbjct: 166 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 225

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD-NGYHPNVTTFTILVNSLC 166
            +E     + P+  +F+ ++   C +    EA  V+D M    G  PNV ++  L+N  C
Sbjct: 226 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYC 285

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA----------------- 209
           K  R+ +A+ +  +M R    P+  TY+ L+ GLC+V R+++A                 
Sbjct: 286 KIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLV 345

Query: 210 -YEMLMN-----------------VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            Y +L++                 ++   L PD+      +DG C+ G    A +L +  
Sbjct: 346 TYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNL 405

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             +G+ P+V T++ + NG C+ G   +   L + M +  C  +   Y+T+  G L+  + 
Sbjct: 406 SSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNET 465

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
             A+ + +EMV  GF  D   M   ++ L
Sbjct: 466 SRAIQLLQEMVARGFSADASTMTLFVKML 494



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 2/251 (0%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDS-IKKDGTNWSVSDFNDLLMALVML 98
           E +D K  P  +     VD + K   + E  D+ D  I++ G   +V  +N L+     +
Sbjct: 228 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKI 287

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
              + A+  F E     L P++ T+S +I   C+     +A  +   M      PN+ T+
Sbjct: 288 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 347

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
            IL++ LCK+  L EA+ +L  +      P+IQ  N  + G+C  G +E A ++  N+ +
Sbjct: 348 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 407

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            GL+PDV+TY+ +++G C+ G  +EA +L  E  E G T N   +NT+  G+ +     +
Sbjct: 408 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSR 467

Query: 279 GVGLLKLMKKR 289
            + LL+ M  R
Sbjct: 468 AIQLLQEMVAR 478



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 4/167 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E + +  +I+    +  +   N  +  +    E E A   FS  SS GL P+ WT+SI
Sbjct: 360 LAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSI 419

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI   C +    EA K+   M +NG   N   +  +     ++     A+++L +M   G
Sbjct: 420 MINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 479

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
              +  T    +K L   G  +   ++L     D  K   + Y  VM
Sbjct: 480 FSADASTMTLFVKMLSDDGLDQSLKQIL----RDFCKQKSWIYENVM 522


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 180/359 (50%), Gaps = 9/359 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+++TF+ +I  YC  N    AR + D M   G+  +V ++  L+  LC++GR+ EA
Sbjct: 5   GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           +E+  +M     +P++  Y  L+KGLC   R EE   ML  +K  G +P    Y AV+D 
Sbjct: 65  VELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            C+  ++ EA E+L E  E+G+ P VVT   + N YCKEG     + +L+LMK R C P+
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
             +Y+ L+ G    GK+  A+++  +M   G   D    N L+RG C+        +E A
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGH-----IESA 235

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           +++   M     + D  TY  +I  L K  +TD+A          G  P  +TFN++I  
Sbjct: 236 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 295

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LC  GK D A   L  M      P   +Y   I  L +++ S +  +  G  L++ V P
Sbjct: 296 LCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 354



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 207/458 (45%), Gaps = 92/458 (20%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A +   E    GLAP   T + +I  YC +    +A +V++ M   G  PNV T+  LV 
Sbjct: 130 AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQ 189

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             C  G++ +A+ +L++M   G  P+  TYN L++G C  G +E A+ +L  ++ DGL  
Sbjct: 190 GFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA 249

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG--------- 274
           D YTY A+++  CK GR+++A  L +    RG+ PN VTFN+L NG CK G         
Sbjct: 250 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFL 309

Query: 275 --------TP--------------MKG------------------------VGLLKLMKK 288
                   TP              MKG                        + + KL+K+
Sbjct: 310 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 369

Query: 289 RN---------------CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           RN               C PD ++Y+T +      G++  A ++  EM + G  VD    
Sbjct: 370 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 429

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL--- 390
           N+L+ G    S  + D    A  + ++MT   SV +  TY I++R L + +  ++ L   
Sbjct: 430 NTLMDG--HASIGQTD---HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 484

Query: 391 -IHLHHAIEMGHI-------------PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
              +  AIE+  +             P + T++++++    +G+ ++A  L+ LM E + 
Sbjct: 485 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 544

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             +   Y  L+T   + ++  DA  L  + ++ G IPQ
Sbjct: 545 SLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQ 582



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 183/387 (47%), Gaps = 11/387 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E +++F  + +   +     +  L+  L      E  +         G  P++ 
Sbjct: 57  EAGRIDEAVELFGEMDQPDMHM----YAALVKGLCNAERGEEGLLMLRRMKELGWRPSTR 112

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ ++   C +    EA +++  MF+ G  P V T T ++N+ CK GR+ +AL VL+ M
Sbjct: 113 AYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELM 172

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GCKPN+ TYN L++G C  G+V +A  +L  ++  G+ PD  TY  ++ G C  G  
Sbjct: 173 KLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHI 232

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A  LL      G+  +  T+N L N  CK+G   +   L   ++ R   P+ +++++L
Sbjct: 233 ESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSL 292

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEK 360
           +NGL K GK   A    ++MV  G   D    +S +  LC MK  +E   L    ++ +K
Sbjct: 293 INGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG--LSFIGEMLQK 350

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
             K  +V     Y IVI  L K +            +  G  P  +T+   ++A C EG+
Sbjct: 351 DVKPSTV----NYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 406

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +++A  +L  M ++       +Y+ L+
Sbjct: 407 LNEAENVLMEMSKNGVTVDTMAYNTLM 433



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 163/391 (41%), Gaps = 12/391 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + + ++  G N     +N L+    +    E+A +        GL  + +T++ +I   C
Sbjct: 203 LLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 262

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A  + D +   G  PN  TF  L+N LCKSG+   A + L++M   GC P+  
Sbjct: 263 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTY 322

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY+  ++ LC +   +E    +  +    +KP    YT V+    K            E 
Sbjct: 323 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 382

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  G  P+VVT+ T    YC EG   +   +L  M K     D ++Y+TL++G    G+ 
Sbjct: 383 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 442

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL------------LEDAYQVFE 359
             AVSI K+M       ++     LLR L      E  L            L D + +F+
Sbjct: 443 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 502

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            M K   + + GTY  ++    +  +T+EA   +    E         +  ++   C   
Sbjct: 503 VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 562

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +   A +L+  M +H  IP   SY  L++ L
Sbjct: 563 RYLDAWVLVCSMIQHGFIPQLMSYQHLLSGL 593



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 139/293 (47%), Gaps = 9/293 (3%)

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G +P+  T+N L+ G C   +V+ A ++   +   G   DV +Y  +++G C+ GR
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+EL  E  +    P++  +  L  G C      +G+ +L+ MK+    P   +Y+ 
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++   +  K + A  + +EM   G         +++   C     ++  + DA +V E 
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYC-----KEGRMSDALRVLEL 171

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +    +  TY  +++      K  +A+  L+     G  P  +T+N +I+  C +G 
Sbjct: 172 MKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGH 231

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           I+ A  LL LM     I  + +Y+ LI  L +  ++  AC+L+ +   +G+ P
Sbjct: 232 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKP 284



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 19/279 (6%)

Query: 105 VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
            + + E  S G  P+  T++  +R YC +    EA  V+  M  NG   +   +  L++ 
Sbjct: 376 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 435

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM------------ 212
               G+   A+ +L QM  +   PN  TY  LL+ L  +  VE+   +            
Sbjct: 436 HASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELT 495

Query: 213 ----LMNV-KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
               L +V K +   P+  TY+++++GF + GR+ EA  L++   E  ++ N   +  L 
Sbjct: 496 DVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 555

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             +CK    +    L+  M +   +P  +SY  LL+GL+  G+   A  IF       + 
Sbjct: 556 TCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYS 615

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
            DE +   ++ GL  K     D+  +   + E+M  + S
Sbjct: 616 PDEIVWKVIIDGLIKKG--HSDISREMIIMLERMNCRPS 652



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 22/257 (8%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++   + K+G       +N L+     + + + AV    + +S    PN +T+ I
Sbjct: 407 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 466

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++R           R V D               +    + K+  L +   + D M +  
Sbjct: 467 LLR------HLVRMRLVED------------VLPLTPAGVWKAIELTDVFGLFDVMKKNE 508

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TY+ +L+G    GR EEA  ++  +K D +  +   YTA++  FCK  R  +A 
Sbjct: 509 FLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAW 568

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L+   I+ G  P ++++  L +G   EG   K   +    + ++  PD+I +  +++GL
Sbjct: 569 VLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 628

Query: 306 LKWGKIRPAVSIFKEMV 322
           +K G       I +EM+
Sbjct: 629 IKKGH----SDISREMI 641



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 32/172 (18%), Positives = 74/172 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L +   +FD +KK+    +   ++ +L         E A    S      ++ N  
Sbjct: 490 KAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNED 549

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ ++ C+C    + +A  ++  M  +G+ P + ++  L++ L   G+  +A E+    
Sbjct: 550 IYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNS 609

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
                 P+   +  ++ GL   G  + + EM++ ++    +P   TY  + +
Sbjct: 610 RWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 661


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 213/411 (51%), Gaps = 10/411 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  ++  ++ F  +  D  + +V  ++ L+  L   N    AV+      + G +P+  
Sbjct: 91  RAGKIETALEFFRKMD-DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVI 149

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I++   C ++    A +V+  M D G  PN+ T+  L++ LC++ R+ +AL ++  M
Sbjct: 150 TYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM 209

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PN+ TY  L+ GLC VGRV++A  ML ++ + G  PD+  Y  +++G CK  + 
Sbjct: 210 TCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQV 269

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +E++ LL  A+  G+ P+VVT++++  G C+     +   LL  +K R C PD I YSTL
Sbjct: 270 DESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTL 329

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K GK+  A  +++ M   G + D    ++L+ GLC         +++A+ +  +M
Sbjct: 330 IDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGR-----VDEAHLLLARM 384

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +  +     TY  +I+ L      DEA+  +         P  +T+N +I  +C   ++
Sbjct: 385 VRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERV 444

Query: 422 DKALLLLFL-MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           D A L  F  M ++  IP   +Y +L   L+ L+KS D   L    L Q V
Sbjct: 445 DSAALDYFQEMIDNGVIPDHITYSIL---LEGLKKSKDLHELRHLVLDQMV 492



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 198/399 (49%), Gaps = 7/399 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++  G   +V  +N L+  L   NE + A + F    S   +P+  T++ ++        
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
              A  +   M D   H +V +F ILV  LC++G+++ ALE   +M    C PN+ TY+ 
Sbjct: 61  LERAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSV 118

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ GLC   RV +A E+L ++K  G  PDV TYT ++DG CK  +   A E+L E ++ G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             PN+VT+N+L +G C+       + L++ M  R C P+ ++Y TL++GL K G+++ A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
           ++  +M+  G   D  + N L+ GLC     + D ++++  +  +        D  TY  
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLC-----KADQVDESIALLRRAVSGGIKPDVVTYSS 293

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           VI  L +  + DEA   L +    G  P  I ++ +I  LC  GK+D+A  L  +M    
Sbjct: 294 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
                 +Y  LI  L +  +  +A  L    ++ G  P 
Sbjct: 354 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPS 392


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 192/364 (52%), Gaps = 5/364 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV +F   L ++    +  +AV   ++   +G+  N ++ +++I C C  +    A  V+
Sbjct: 95  SVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVM 154

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             MF  G  P+  TF  L+N LC  G++KEA+ + ++M   G +PN+ +YN ++ GLC  
Sbjct: 155 GKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKN 214

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A  +   ++ +  KP+V TY  ++D  CK    NEA+E L+E ++RG+ P+VVT+
Sbjct: 215 GNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTY 274

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           NT+ +G+C  G   +   L K M  RN +PD ++++ L++GL K G +  A  + + M  
Sbjct: 275 NTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTE 334

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E +    N+L+ G C+ +      +++A +V   M  K    +  +Y I+I    K 
Sbjct: 335 KGAEPNAYTYNALMDGYCLHNQ-----MDEAIKVLGIMIGKGCAPNLSSYNILINGYCKS 389

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           K+ +EA   L    E    P T+T++ ++Q LC  G+  +AL L   M     +P   +Y
Sbjct: 390 KRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAY 449

Query: 444 DMLI 447
            +L+
Sbjct: 450 SILL 453



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 209/432 (48%), Gaps = 8/432 (1%)

Query: 45  LKENPRS--LQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
           ++ NPR   ++  +F+  I K       + + + +   G   +V   N L+  L  L+  
Sbjct: 88  VRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHV 147

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + AV    +    G+ P++ TF+ +I   CN+    EA  + + M  +G+ PNV ++  +
Sbjct: 148 DFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTV 207

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +N LCK+G    A+ V  +M +   KPN+ TYN ++  LC    V EA E L  + + G+
Sbjct: 208 INGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGI 267

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PDV TY  ++ GFC +G+ NEA  L  E + R V P+ VTFN L +G CKEG   +   
Sbjct: 268 PPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARC 327

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           + + M ++   P+  +Y+ L++G     ++  A+ +   M+  G   +    N L+ G C
Sbjct: 328 VSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYC 387

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                +   + +A ++  +M++K    D  TY  +++ L +  +  EAL         G 
Sbjct: 388 -----KSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGL 442

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           +P  + ++ ++   C  G +D+AL LL  M+E    P+   Y +LI  +    K   A  
Sbjct: 443 LPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKE 502

Query: 462 LYGAALKQGVIP 473
           L+      G+ P
Sbjct: 503 LFSKLSADGIRP 514



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 192/378 (50%), Gaps = 5/378 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +F  ++++    +V  +N ++ +L        AV+F SE    G+ P+  T++ ++  
Sbjct: 221 VRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHG 280

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C+     EA ++   M      P+  TF ILV+ LCK G + EA  V + M   G +PN
Sbjct: 281 FCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPN 340

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L+ G C   +++EA ++L  +   G  P++ +Y  +++G+CK  R NEA  LL+
Sbjct: 341 AYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLS 400

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E  E+ +TP+ VT++TL  G C+ G P + + L K M     LPD ++YS LL+G  K G
Sbjct: 401 EMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHG 460

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +  A+ + KEM     + +  +   L+RG+ +        LE A ++F K++      D
Sbjct: 461 HLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK-----LEVAKELFSKLSADGIRPD 515

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY ++I+ L K   +DEA        + G +P + ++N +IQ          A+ L+ 
Sbjct: 516 IWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLID 575

Query: 430 LMYEHAKIPSRTSYDMLI 447
            M         +++ ML+
Sbjct: 576 EMVGKRFSADSSTFQMLL 593



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 194/397 (48%), Gaps = 5/397 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE + +F+ +   G   +V  +N ++  L        AV+ F +       PN  T++ 
Sbjct: 182 IKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNT 241

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA + +  M D G  P+V T+  +++  C  G+L EA  +  +M    
Sbjct: 242 IIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN 301

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  T+N L+ GLC  G V EA  +   +   G +P+ YTY A+MDG+C   + +EA+
Sbjct: 302 VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAI 361

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++L   I +G  PN+ ++N L NGYCK     +   LL  M ++N  PD ++YSTL+ GL
Sbjct: 362 KVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGL 421

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G+ R A+++FKEM   G   D    + LL G C     +   L++A ++ ++M ++ 
Sbjct: 422 CQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFC-----KHGHLDEALKLLKEMHERR 476

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +   Y I+IR +    K + A          G  P   T+N +I+ L  EG  D+A 
Sbjct: 477 IKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAY 536

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
                M +   +P   SY+++I    Q + S  A  L
Sbjct: 537 EFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQL 573



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 140/290 (48%), Gaps = 1/290 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     VD + K   + E   + +++ + G   +   +N L+    + N+ + A+K 
Sbjct: 304 PDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKV 363

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
                  G APN  +++I+I  YC      EA++++  M +    P+  T++ L+  LC+
Sbjct: 364 LGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQ 423

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            GR +EAL +  +M   G  P++  Y+ LL G C  G ++EA ++L  +    +KP++  
Sbjct: 424 VGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIIL 483

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           YT ++ G    G+   A EL ++    G+ P++ T+N +  G  KEG   +     + M+
Sbjct: 484 YTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKME 543

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
               LPD  SY+ ++ G L+      A+ +  EMV   F  D      LL
Sbjct: 544 DDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 117/238 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E I +   +   G   ++S +N L+           A +  SE S   L P++ T+S 
Sbjct: 357 MDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYST 416

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C      EA  +   M  +G  P++  ++IL++  CK G L EAL++L +M    
Sbjct: 417 LMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERR 476

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KPNI  Y  L++G+   G++E A E+   +  DG++PD++TY  ++ G  K G S+EA 
Sbjct: 477 IKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAY 536

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           E   +  + G  P+  ++N +  G+ +       + L+  M  +    D  ++  LL+
Sbjct: 537 EFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 142/303 (46%), Gaps = 5/303 (1%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           + +AL    +M R+  +P++  +   L  +    +   A  +   +   G+  +VY+   
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           +++  C++   + A+ ++ +  + G+ P+ +TFNTL NG C EG   + VGL   M    
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             P+ ISY+T++NGL K G    AV +F++M +   + +    N+++  LC     +  L
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLC-----KDRL 251

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           + +A +   +M  +    D  TY  ++       + +EA       +    +P T+TFN 
Sbjct: 252 VNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNI 311

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           ++  LC EG + +A  +   M E    P+  +Y+ L+       +  +A  + G  + +G
Sbjct: 312 LVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG 371

Query: 471 VIP 473
             P
Sbjct: 372 CAP 374



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/101 (21%), Positives = 50/101 (49%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L+   ++F  +  DG    +  +N ++  L+     + A +FF +    G  P+S +
Sbjct: 494 AGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCS 553

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           ++++I+ +    D   A ++ID M    +  + +TF +L++
Sbjct: 554 YNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 197/402 (49%), Gaps = 11/402 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           +    FD + +      +S FN LL  L  +N        ++E    GL+P+ +T SI+ 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
            C CN N   EA   +  +   GY PNV T+T L+  LC   R+ EA  +  +M ++GC 
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG------LKPDVYTYTAVMDGFCKVGRS 241
           PN  TY  L+KGLC  G V  A ++   + ND        KP V TY+ ++DG CKVGR 
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA EL  E   +G+ P+V++++TL +G+C  G   +   L   M  +   PD +++S L
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K GK+  A  + + M++ G   +    NSL+ G CM        L  A ++F  M
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD-----LNSARELFLSM 368

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K    D  +Y  +I    K  K  EA+   +  +++G  P   T+  +++ L  +GK+
Sbjct: 369 PSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKV 428

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             A  L  +M  +    +   Y + +  L + +  ++A  L+
Sbjct: 429 GDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELF 470



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 207/392 (52%), Gaps = 7/392 (1%)

Query: 66  LKERIDIFDSIKKDGTNW--SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           LK   ++ +   + G N    V  ++ ++  L  +  ++ A + F E  + G+ P+  ++
Sbjct: 216 LKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISY 275

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           S +I  +C    + +++ + D M D G  P++ TF++L+++LCK G++ EA ++L+ M +
Sbjct: 276 STLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQ 335

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            G  PN+ TYN L+ G C VG +  A E+ +++ + GL+PD  +YT +++G+CK  +  E
Sbjct: 336 RGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKE 395

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           AM L NE ++ G +PNV T+ TL  G  ++G       L  +MK      +   Y   L+
Sbjct: 396 AMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLD 455

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL K   +  A+ +F E+  + F+++    + L+ GLC     +   LE A+++FEK+++
Sbjct: 456 GLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLC-----KAGKLETAWELFEKLSQ 510

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           +    D  TY I+I    K  + D A I      E G  P  I +N ++   C   K+++
Sbjct: 511 EGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEE 570

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
            + LL  M +    P+  S  +++  L + EK
Sbjct: 571 VIKLLHKMVQKDVSPNAASCTIVVDMLCKDEK 602



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 155/343 (45%), Gaps = 13/343 (3%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +A    D M  +   P +++F  L+  L K     +   + ++M   G  P++ T + L 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
             LC V RV EA   +  +   G  P+V TYT ++ G C   R +EA  L     + G T
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR------NCLPDKISYSTLLNGLLKWGKI 311
           PN VT+ TL  G C+ G     + L K M         NC P  I+YS +++GL K G+ 
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDP 370
             A  +F+EM   G   D    ++L+ G C    W++      +  +F++M  +    D 
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQ------SKHLFDEMVDQGVQPDM 307

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            T+ ++I TL K  K  EA   L   I+ G +P  IT+N++I   C  G ++ A  L   
Sbjct: 308 VTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLS 367

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M      P   SY  LI    +  K  +A  LY   L+ G  P
Sbjct: 368 MPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSP 410



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 146/290 (50%), Gaps = 13/290 (4%)

Query: 166 CKSGRLK--EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           CK+G +   +A    D M R    P I ++N LL GL  +    + + +   ++  GL P
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D++T + + +  C V R +EA+  +   + RG  PNVVT+ TL  G C E    +   L 
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV----RFGFEVDERMM--NSLL 337
             M+K  C P+ ++Y TL+ GL + G +  A+ + KEM+    ++G      ++  + ++
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            GLC    E     ++A ++FE+M  +  + D  +Y  +I       K D++       +
Sbjct: 245 DGLCKVGRE-----DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           + G  P  +TF+ +I  LC EGK+ +A  LL +M +   +P+  +Y+ LI
Sbjct: 300 DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLI 349



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 36/314 (11%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E +D    P  +     +D + K   + E   + + + + G   ++  +N L+    M+ 
Sbjct: 297 EMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVG 356

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           +  +A + F    S GL P+  +++ +I  YC      EA  + + M   G  PNVTT+ 
Sbjct: 357 DLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYG 416

Query: 160 -----------------------------------ILVNSLCKSGRLKEALEVLDQMGRI 184
                                              I ++ LCK+  L EA+E+ +++   
Sbjct: 417 TLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSY 476

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
             K NI+ Y+CL+ GLC  G++E A+E+   +  +GL+PDV TY  ++ GFCKVG+ + A
Sbjct: 477 NFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNA 536

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L  +  E G TP+++ +NTL  G+C+     + + LL  M +++  P+  S + +++ 
Sbjct: 537 NILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDM 596

Query: 305 LLKWGKIRPAVSIF 318
           L K  K +  V + 
Sbjct: 597 LCKDEKYKKFVDLL 610


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 194/392 (49%), Gaps = 5/392 (1%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           N     +N LL  L      +     +++  + G  PN++T+  ++R  C    F EAR 
Sbjct: 14  NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARS 73

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V   M   G  PNV +++IL+  LC+  ++ EA E+L++M   G +PN+ TY  LL GLC
Sbjct: 74  VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
            +G+++EA ++   +   G  PD   Y  ++DGF K G   EA  L  E +E+G  P V 
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+N+L +G+ ++G   +   L K M ++ C+P+  +++ LL+G  K G +  A  +F EM
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G   D    N+L+RG+C K         +A ++  +M +     D  +Y I+I    
Sbjct: 254 RSLGCPPDVVSYNTLIRGMCSKGKP-----HEAQRLLREMIRSGVGPDIVSYNILIDGYS 308

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K    D A+   +   + G  P   +++ +I  LC  GK+  A ++   M  +   P   
Sbjct: 309 KSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA 368

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               L+  L + E+  ++C L+ A +K   +P
Sbjct: 369 VVIPLVIGLCRGERLTESCELFQAMVKFECVP 400



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 169/342 (49%), Gaps = 5/342 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   + E  ++ + +   G   +V  +  LL  L  + + + AV  FS     G  P+  
Sbjct: 99  RGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGV 158

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++++I  +  K D  EA ++ + M + G  P V T+  L++   + G       +   M
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R GC PNI T+N LL G C +G + EA+ + + +++ G  PDV +Y  ++ G C  G+ 
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKP 278

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA  LL E I  GV P++V++N L +GY K G     + L   + K    PD  SYST+
Sbjct: 279 HEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTI 338

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L + GK+  A  +FK+M+  G   D  ++  L+ GLC       + L ++ ++F+ M
Sbjct: 339 IDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC-----RGERLTESCELFQAM 393

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
            K   V     Y +++  L K K++D+     H   E G  P
Sbjct: 394 VKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP 435



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 185/408 (45%), Gaps = 47/408 (11%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  LL +L      E A   F   ++ G +PN +++SI+I   C      EA ++++ M 
Sbjct: 55  YGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G+ PNV T+  L++ LCK G+LKEA+++  +M   GC P+   YN L+ G    G + 
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVM----------------------------------- 232
           EAY +   +   G  P V+TY +++                                   
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           DGFCK+G   EA  L  E    G  P+VV++NTL  G C +G P +   LL+ M +    
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVG 294

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD +SY+ L++G  K G +  A+ +F E+ + G E D    ++++  LC         + 
Sbjct: 295 PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK-----VG 349

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A+ VF+ M    S  D      ++  L +G++  E+       ++   +P    +N ++
Sbjct: 350 AAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK--LDQLEKSYD 458
             LC   + D    +   + E    P     D+ I+K  L+ L +S D
Sbjct: 410 YKLCKAKRSDDVCEIFHELTERGFSP-----DVEISKVILETLRRSDD 452



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 151/323 (46%), Gaps = 5/323 (1%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           Y+    ++  L+  L KSGR        + M   GC PN  TY  LL+ LC   R EEA 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +   G  P+V++Y+ ++ G C+  + +EA ELLNE I+ G  PNVVT+ +L +G 
Sbjct: 73  SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G   + V L   M  R C PD + Y+ L++G  K G +  A  +F+EM+  G     
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              NSLL G     +  K        +F+ M ++  V +  T+  ++    K     EA 
Sbjct: 193 FTYNSLLSG-----FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAH 247

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                   +G  P  +++N +I+ +C +GK  +A  LL  M      P   SY++LI   
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGY 307

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +      A  L+    K G+ P
Sbjct: 308 SKSGALDHAIKLFYEIPKSGLEP 330


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 203/389 (52%), Gaps = 8/389 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F    K G   + + FN L+    M N    A++   +   YG  P++ T++ ++   C
Sbjct: 184 VFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLC 243

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            K    EAR ++  M + G  PN TTF ILV   C+ G LKEA  V++ M +    P+  
Sbjct: 244 KKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAW 303

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN ++ G C  GR+ EA  +   ++N  L PDV TY  +++G  + G S E  +L+ E 
Sbjct: 304 TYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEM 363

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             RG+ PN VT+N +   + K+G   +    ++ M++  CLPD ++Y+TL++   K GK+
Sbjct: 364 EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKM 423

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +  EM R G ++D+  +N++LR LC    E K  L++A+ +     ++    D  
Sbjct: 424 DEAFRLMDEMGRKGLKMDDVTLNTMLRALCR---ERK--LDEAHDLLCSARRRGYFVDEV 478

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           +YG +I    K +K  +AL       E   IP  IT+N++I  LC  GK ++A+  L  +
Sbjct: 479 SYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDEL 538

Query: 432 YEHAKIPSRTSYDMLI---TKLDQLEKSY 457
            E   +P   +Y+ +I    +  Q+EK++
Sbjct: 539 LESGLVPDEITYNTIIHGYCQEGQVEKAF 567



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 209/406 (51%), Gaps = 10/406 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQET---AVKFFSEASSYGLAPNSWTFSIMIR 128
           IF+ +K+ G   ++   N LL ALV      +   +   F++    G+  N+ +F+I+I 
Sbjct: 146 IFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIH 205

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
             C +N F EA +V+  M D G  P+  T+  +++ LCK GRL EA ++L  M   G  P
Sbjct: 206 GSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFP 265

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N  T+N L+ G C +G ++EA  ++  +  + + PD +TY  ++ GFCK GR  EAM L 
Sbjct: 266 NRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLR 325

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
            E     ++P+VVT+NTL NG  + G+  +G  L++ M+ R   P+ ++Y+ ++   +K 
Sbjct: 326 EEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKK 385

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK-DLLEDAYQVFEKMTKKVSV 367
           GK+       ++M   G   D    N+L+      SW  K   +++A+++ ++M +K   
Sbjct: 386 GKMDEVDKTVRKMEESGCLPDIVTYNTLI------SWHCKVGKMDEAFRLMDEMGRKGLK 439

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  T   ++R L + +K DEA   L  A   G+    +++  +I       K  +AL L
Sbjct: 440 MDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRL 499

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              M E   IPS  +Y+ +I  L Q+ K+  A       L+ G++P
Sbjct: 500 WDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVP 545



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 177/340 (52%), Gaps = 5/340 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+         E   K   E    G+ PNS T+++M++ +  K    E  K + 
Sbjct: 337 VVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVR 396

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M ++G  P++ T+  L++  CK G++ EA  ++D+MGR G K +  T N +L+ LC   
Sbjct: 397 KMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRER 456

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +++EA+++L + +  G   D  +Y  ++ G+ K  ++++A+ L +E  E+ + P+++T+N
Sbjct: 457 KLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYN 516

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           ++  G C+ G   + +  L  + +   +PD+I+Y+T+++G  + G++  A     +MV  
Sbjct: 517 SMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEK 576

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
            F+ D    N+LL GLC     ++ +LE A ++F     K    D  +Y  +I +L K K
Sbjct: 577 NFKPDVVTCNTLLCGLC-----KEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEK 631

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +  EA   L    E    P   T+N ++  L   G++  A
Sbjct: 632 RFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDA 671



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 192/433 (44%), Gaps = 40/433 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E  D+   +K  G   + + FN L++    L   + A       S   + P++W
Sbjct: 244 KKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAW 303

Query: 122 TFSIMIRCYCNKNDFFEAR-----------------------------------KVIDCM 146
           T+++MI  +C +    EA                                    K+I+ M
Sbjct: 304 TYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEM 363

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
              G  PN  T+ ++V    K G++ E  + + +M   GC P+I TYN L+   C VG++
Sbjct: 364 EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKM 423

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA+ ++  +   GLK D  T   ++   C+  + +EA +LL  A  RG   + V++ TL
Sbjct: 424 DEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTL 483

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             GY K     + + L   MK++  +P  I+Y++++ GL + GK   A+    E++  G 
Sbjct: 484 IIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGL 543

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             DE   N+++ G C +   EK     A+Q   KM +K    D  T   ++  L K    
Sbjct: 544 VPDEITYNTIIHGYCQEGQVEK-----AFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGML 598

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           ++AL   +  I  G     +++N +I +LC E +  +A  LL  M E    P   +Y+ +
Sbjct: 599 EKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAI 658

Query: 447 ITKLDQLEKSYDA 459
           +  L    +  DA
Sbjct: 659 LGGLTDAGRMKDA 671



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 87/183 (47%), Gaps = 8/183 (4%)

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW---GKIRPAVSIFKEMVRFG 325
            Y   G P +   +   MK+    P  ++ +TLLN L+++     IR + ++F + ++ G
Sbjct: 133 AYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIG 192

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            +++    N L+ G CM     ++   +A +V  KM       D  TY  ++  L K  +
Sbjct: 193 VKINTNSFNILIHGSCM-----ENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGR 247

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            +EA   L      G  P   TFN ++   C  G + +A  ++ LM +++ +P   +Y++
Sbjct: 248 LNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNV 307

Query: 446 LIT 448
           +I+
Sbjct: 308 MIS 310


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 191/364 (52%), Gaps = 6/364 (1%)

Query: 85  VSDFNDLLMALVMLNEQ-ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +  F  LL A+V + +  +T +    +    GL+PN +T SI+I C+ +      A  V+
Sbjct: 97  IIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVL 156

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   G  P + TFT L+N LCK G+  +A+E+ D M   GC+P++ TY  ++ GLC +
Sbjct: 157 AKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKI 216

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A  +L  ++  G +P+V TY+ ++D   K  R NEA+++ +    +G++P++ T+
Sbjct: 217 GETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTY 276

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L  G C      +   LL  M+  N +PD ++++ L++ + K GK+  A  + K M  
Sbjct: 277 NSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTE 336

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E D    +SL+ G  ++S      + +A ++F+ M  K    D  +Y I+I    K 
Sbjct: 337 MGVEPDVVTYSSLMYGYSLRSE-----VVEARKLFDAMITKGCKPDVFSYNILINGYCKV 391

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           K+ DEA    +  I  G  P  +++N +I  LC  G + +A  L   M+ +  +P+  +Y
Sbjct: 392 KRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTY 451

Query: 444 DMLI 447
            +L+
Sbjct: 452 SILL 455



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 186/394 (47%), Gaps = 5/394 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G + ++   + L+     L   + A    ++    GL P   TF+ +I   C    F +A
Sbjct: 128 GLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQA 187

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            ++ D M   G  P+V T+T ++N LCK G    A  +L +M   GC+PN+ TY+ ++  
Sbjct: 188 MELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDS 247

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
                RV EA ++   +K  G+ PD++TY +++ G C   +  EA  LLNE     + P+
Sbjct: 248 HRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPD 307

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           +VTFN L +  CKEG   +  G+LK M +    PD ++YS+L+ G     ++  A  +F 
Sbjct: 308 IVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFD 367

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            M+  G + D    N L+ G C     +   +++A Q+F +M  +    +  +Y  +I  
Sbjct: 368 AMITKGCKPDVFSYNILINGYC-----KVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           L +     EA     +    G++P   T++ ++   C +G   KA  L   M      P+
Sbjct: 423 LCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPN 482

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              Y++LI  + +     DA  L+     +G+ P
Sbjct: 483 LVMYNILIDAMCKSGNLRDARKLFSELFVKGLQP 516



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 185/411 (45%), Gaps = 5/411 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K     + +++FD +   G    V  +  ++  L  + E   A     +    G  PN  
Sbjct: 180 KVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVV 239

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  +       EA  +   M   G  P++ T+  L+  LC   + KEA  +L++M
Sbjct: 240 TYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEM 299

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +   P+I T+N L+  +C  G+V EA  +L  +   G++PDV TY+++M G+      
Sbjct: 300 RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEV 359

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +L +  I +G  P+V ++N L NGYCK     +   L   M  +   P+ +SY+TL
Sbjct: 360 VEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTL 419

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL + G +R A ++FK M   G   +    + LL G C + +  K     A+++F  M
Sbjct: 420 IHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGK-----AFRLFRAM 474

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
               S  +   Y I+I  + K     +A          G  P    +  +I  LC EG +
Sbjct: 475 QSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLL 534

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           D+AL     M E    P   SY+++I      +    A  L G    +G I
Sbjct: 535 DEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFI 585



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 155/342 (45%), Gaps = 40/342 (11%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E +DIF  +K  G +  +  +N L+  L   ++ + A    +E  S  + P+  TF++
Sbjct: 254 VNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNV 313

Query: 126 MIRCYCN-----------------------------------KNDFFEARKVIDCMFDNG 150
           ++   C                                    +++  EARK+ D M   G
Sbjct: 314 LVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKG 373

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             P+V ++ IL+N  CK  R+ EA ++ ++M   G  PN  +YN L+ GLC +G + EA 
Sbjct: 374 CKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREAR 433

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +  N+  +G  P+++TY+ ++DGFCK G   +A  L          PN+V +N L +  
Sbjct: 434 NLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAM 493

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G       L   +  +   P+   Y+T++NGL K G +  A+  F+ M   G   DE
Sbjct: 494 CKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDE 553

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
              N ++RG      E +     A Q+  +M  K  + D GT
Sbjct: 554 ISYNVIIRGFLHHKDESR-----AVQLIGEMRDKGFIADVGT 590



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 147/298 (49%), Gaps = 3/298 (1%)

Query: 33  AAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDL 91
           A+A L+   SL++   P  +     VD I K   + E   +  ++ + G    V  ++ L
Sbjct: 292 ASALLNEMRSLNIM--PDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSL 349

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           +    + +E   A K F    + G  P+ ++++I+I  YC      EA+++ + M   G 
Sbjct: 350 MYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGL 409

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            PN  ++  L++ LC+ G L+EA  +   M   G  PN+ TY+ LL G C  G   +A+ 
Sbjct: 410 TPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFR 469

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +   +++   KP++  Y  ++D  CK G   +A +L +E   +G+ PN   + T+ NG C
Sbjct: 470 LFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLC 529

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           KEG   + +   + M++  C PD+ISY+ ++ G L       AV +  EM   GF  D
Sbjct: 530 KEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIAD 587



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 102/201 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   +F+ +   G   +   +N L+  L  L     A   F    + G  PN +
Sbjct: 390 KVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLF 449

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI++  +C +  F +A ++   M      PN+  + IL++++CKSG L++A ++  ++
Sbjct: 450 TYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSEL 509

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +PN Q Y  ++ GLC  G ++EA E   N++ DG  PD  +Y  ++ GF      
Sbjct: 510 FVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDE 569

Query: 242 NEAMELLNEAIERGVTPNVVT 262
           + A++L+ E  ++G   +V T
Sbjct: 570 SRAVQLIGEMRDKGFIADVGT 590


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 197/397 (49%), Gaps = 42/397 (10%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+  T+S +I   C      EA ++++ M + G +P+V T+TI+V+ LC++G++ EA
Sbjct: 5   GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            E+  +M   GC  N   YN L+ GLC    +E AY++L  + + G +PD  TY  ++ G
Sbjct: 65  DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL--MKKRNCL 292
            C++G+ +EA +  +    RG +P+VV +N L +   KEG   +  GL K   M  R   
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD I+Y+TL++G  +  K   A+ +FK+++  G+  D    NS+L GL  KS      ++
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN-----MD 239

Query: 353 DAYQVFEKMTKKVSVTDPGTYGI-----------------------------------VI 377
           +A ++F+KM       +  TY I                                   VI
Sbjct: 240 EAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVI 299

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L K KK D+A   L    ++G +P  +T+N ++  LC    +DKA  L   M ++   
Sbjct: 300 DMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA 359

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           P   SY +++  L +  K +DA  L+   +++ ++P 
Sbjct: 360 PDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPD 396



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 215/435 (49%), Gaps = 8/435 (1%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        VDR+ +A  + E  ++F  + + G + +   +N L+  L      E A K
Sbjct: 42  NPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYK 101

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
              E +S G  P++ T++ ++   C      EA++  D M   GY P+V  +  L+++L 
Sbjct: 102 LLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALY 161

Query: 167 KSGRLKEALEVLDQMGRIGCK--PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           K G++ EA  +   M     K  P++ TYN L+ G C V + +EA ++  +V   G  PD
Sbjct: 162 KEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPD 221

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
             TY +++ G  +    +EA E+  + ++ G  PN  T++ + +G+C+ G   + + L +
Sbjct: 222 TVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYE 281

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            M ++   PD +  + +++ L K  K+  A  + +EM + G   D    N LL GLC   
Sbjct: 282 EMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLC--- 338

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
             + +L++ A+++F  M       D  +Y +V+  L K  K  +A +     IE   +P 
Sbjct: 339 --KTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPD 396

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            +TFN ++  LC  GK+D+A  LL +M EH  +P   +   L+  L + +++ +A  L+ 
Sbjct: 397 VVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQ 456

Query: 465 AALKQGVIPQRKPQD 479
             +++G +    P +
Sbjct: 457 YMVEKGTVADVLPHN 471



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 193/385 (50%), Gaps = 8/385 (2%)

Query: 39  TAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM 97
           T +  D K  P  +     +D   +     E + +F  +   G       +N +L+ L  
Sbjct: 175 TMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR 234

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
            +  + A + F +    G APN  T+SI++  +C   +     ++ + M +  + P+V  
Sbjct: 235 KSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLL 294

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
              +++ LCK+ ++ +A +VL++M +IG  P++ TYN LL GLC    V++A+E+   + 
Sbjct: 295 CNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV 354

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           ++G  PD+ +Y+ V++G CK  + ++A  L +  IER + P+VVTFN L +G CK G   
Sbjct: 355 DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLD 414

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   LL +M + N LPD ++ +TL++GL +  +   AV +F+ MV  G   D    N +L
Sbjct: 415 EAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVL 474

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHH 395
            GLC +       L  A   F+ M K      P   TY  ++  L +  + D+A+ +   
Sbjct: 475 AGLCREGK-----LAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQ 529

Query: 396 AIEMGHIPRTITFNNVIQALCGEGK 420
               G  P  + +N ++  L  +G+
Sbjct: 530 MTGSGCAPDYVAYNTLMNGLRKQGR 554



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 196/441 (44%), Gaps = 34/441 (7%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS--EASSYGLAPNSWTF 123
           + E    FDS+   G +  V  +N LL AL    +   A   F   + +   +AP+  T+
Sbjct: 131 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITY 190

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +I  +C      EA K+   +   GY P+  T+  ++  L +   + EA E+  +M  
Sbjct: 191 NTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD 250

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            GC PN  TY+ +L G C VG +    E+   +      PDV    AV+D  CK  + ++
Sbjct: 251 SGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDD 310

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A ++L E  + G  P+VVT+N L +G CK     K   L   M    C PD +SYS +LN
Sbjct: 311 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 370

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLE--------- 352
           GL K  K+  A  +F  M+      D    N L+ GLC   K  E KDLL+         
Sbjct: 371 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLP 430

Query: 353 -------------------DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
                              +A ++F+ M +K +V D   + IV+  L +  K  +AL+  
Sbjct: 431 DGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFF 490

Query: 394 HHAIEM-GHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
              ++  G   P  +T+  ++ AL   G++D+A+     M      P   +Y+ L+  L 
Sbjct: 491 KSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLR 550

Query: 452 QLEKSYDACALYGAALKQGVI 472
           +  +   A  L  A  ++G +
Sbjct: 551 KQGRHIQADRLTQAMKEKGFL 571



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 150/271 (55%), Gaps = 9/271 (3%)

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G +P++ TY+ ++ GLC  G+V EA EM+  +   G+ PDV TYT ++D  C+ G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA EL ++ IERG + N V +N L NG CK+    +   LL+ M  +   PD I+Y+T
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +L+GL + GK+  A   F  M   G+  D    N LL  L    ++E  + E A+ +F+ 
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDAL----YKEGKVAE-AWGLFKT 175

Query: 361 M---TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           M    +KV+  D  TY  +I    + +KTDEA+      I  G++P T+T+N+++  L  
Sbjct: 176 MDMADRKVA-PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR 234

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           +  +D+A  +   M +    P+  +Y ++++
Sbjct: 235 KSNMDEAEEMFKKMVDSGCAPNGATYSIVLS 265



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 3/285 (1%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           +P  L     +D + KA  + +   + + + K G    V  +N LL  L   N  + A +
Sbjct: 289 SPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE 348

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            FS     G AP+  ++S+++   C  N   +AR + D M +    P+V TF IL++ LC
Sbjct: 349 LFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLC 408

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K+G+L EA ++LD M      P+  T   L+ GLC   R +EA  +   +   G   DV 
Sbjct: 409 KAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVL 468

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
            +  V+ G C+ G+  +A+      ++     +P+VVT+ TL N   + G   + V   +
Sbjct: 469 PHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQ 528

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            M    C PD ++Y+TL+NGL K G+   A  + + M   GF  D
Sbjct: 529 QMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 2/167 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E  D+ D + +            L+  L      + AV+ F      G   +  
Sbjct: 409 KAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVL 468

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMF--DNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             +I++   C +    +A      M   D  + P+V T+T LVN+L ++GR+ +A++   
Sbjct: 469 PHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQ 528

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           QM   GC P+   YN L+ GL   GR  +A  +   +K  G   D +
Sbjct: 529 QMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 193/392 (49%), Gaps = 5/392 (1%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           N     +N LL  L      +     +++    G  PN++T+  ++R  C    F EAR 
Sbjct: 14  NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARS 73

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V   M   G  PNV +++IL+  LC+  ++ EA E+L++M   G +PN+ TY  LL GLC
Sbjct: 74  VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
            +G+++EA ++   +   G  PD   Y  ++DGF K G   EA  L  E +E+G  P V 
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+N+L +G+ ++G   +   L K M ++ C+P+  +++ LL+G  K G +  A  +F EM
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G   D    N+L+RG+C K         +A ++  +M +     D  +Y I+I    
Sbjct: 254 RSLGCPPDVVSYNTLMRGMCSKGKP-----HEAQRLLREMIRSGVGPDIVSYNILIDGYS 308

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K    D A+   +   + G  P   +++ +I  LC  GK+  A ++   M  +   P   
Sbjct: 309 KSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA 368

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               L+  L + E+  ++C L+ A +K   +P
Sbjct: 369 VVIPLVIGLCRGERLTESCELFQAMVKFECVP 400



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 169/342 (49%), Gaps = 5/342 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   + E  ++ + +   G   +V  +  LL  L  + + + AV  FS     G  P+  
Sbjct: 99  RGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGV 158

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++++I  +  K D  EA ++ + M + G  P V T+  L++   + G       +   M
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R GC PNI T+N LL G C +G + EA+ + + +++ G  PDV +Y  +M G C  G+ 
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKP 278

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA  LL E I  GV P++V++N L +GY K G     + L   + K    PD  SYST+
Sbjct: 279 HEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTI 338

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L + GK+  A  +FK+M+  G   D  ++  L+ GLC       + L ++ ++F+ M
Sbjct: 339 IDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC-----RGERLTESCELFQAM 393

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
            K   V     Y +++  L K K++D+     H   E G  P
Sbjct: 394 VKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP 435



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 185/408 (45%), Gaps = 47/408 (11%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  LL +L      E A   F   ++ G +PN +++SI+I   C      EA ++++ M 
Sbjct: 55  YGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G+ PNV T+  L++ LCK G+LKEA+++  +M   GC P+   YN L+ G    G + 
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVM----------------------------------- 232
           EAY +   +   G  P V+TY +++                                   
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           DGFCK+G   EA  L  E    G  P+VV++NTL  G C +G P +   LL+ M +    
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVG 294

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD +SY+ L++G  K G +  A+ +F E+ + G E D    ++++  LC         + 
Sbjct: 295 PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK-----VG 349

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A+ VF+ M    S  D      ++  L +G++  E+       ++   +P    +N ++
Sbjct: 350 AAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK--LDQLEKSYD 458
             LC   + D    +   + E    P     D+ I+K  L+ L +S D
Sbjct: 410 YKLCKAKRSDDVCEIFHELTERGFSP-----DVEISKVILETLRRSDD 452



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 151/323 (46%), Gaps = 5/323 (1%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           Y+    ++  L+  L KSGR        + M   GC PN  TY  LL+ LC   R EEA 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +   G  P+V++Y+ ++ G C+  + +EA ELLNE I+ G  PNVVT+ +L +G 
Sbjct: 73  SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G   + V L   M  R C PD + Y+ L++G  K G +  A  +F+EM+  G     
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              NSLL G     +  K        +F+ M ++  V +  T+  ++    K     EA 
Sbjct: 193 FTYNSLLSG-----FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAH 247

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                   +G  P  +++N +++ +C +GK  +A  LL  M      P   SY++LI   
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGY 307

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +      A  L+    K G+ P
Sbjct: 308 SKSGALDHAIKLFYEIPKSGLEP 330


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 201/408 (49%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +   +   G    V  +N +L  L M        +   E       PN  TF+ 
Sbjct: 245 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 304

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C    F    +V+  M ++G  P++  +  +++ +CK G L+ A E+L++M   G
Sbjct: 305 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 364

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KPN+  YN LLKGLC   R EE  E+L  + +     D  T+  ++D FC+ G  +  +
Sbjct: 365 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 424

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL + +E G  P+V+T+ T+ NG+CKEG   + V LLK M    C P+ ISY+ +L GL
Sbjct: 425 ELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 484

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
               +   A  +  +M++ G  ++    N+L+  LC     +K L+E A ++ ++M    
Sbjct: 485 CSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC-----KKGLVEQAIELLKQMLVNG 539

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  +Y  VI  LGK  KTDEAL  L+  +  G  P TI ++++  AL  EG+I+K +
Sbjct: 540 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 599

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   + +         Y+ +I+ L +  ++  A       +  G +P
Sbjct: 600 QMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 647



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 190/384 (49%), Gaps = 10/384 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++       + E+A +    A++  + PN++T+  ++R  C +    +A  V+D M 
Sbjct: 130 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P    + +++ + C+ G  + A+ VL+ +   GC  ++   N +L  +C  G V+
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  +L ++ + G +PDV +Y AV+ G C   R     EL+ E +     PN+VTFNTL 
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +  C+ G   +   +L  M +  C PD   Y+T+++G+ K G +  A  I   M  +G +
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 328 VDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
            +    N+LL+GLC  + WEE +      ++  +M  K    D  T+ I++    +    
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETE------ELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 420

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D  +  L   +E G +P  IT+  VI   C EG ID+A++LL  M      P+  SY ++
Sbjct: 421 DRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 480

Query: 447 ITKLDQLEKSYDACALYGAALKQG 470
           +  L   E+  DA  L    ++QG
Sbjct: 481 LKGLCSAERWVDAEDLMSQMIQQG 504



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 154/319 (48%), Gaps = 5/319 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I + +   G   +V  +N LL  L      E   +  +E        +  TF+I++  +
Sbjct: 355 EILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFF 414

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C         ++++ M ++G  P+V T+T ++N  CK G + EA+ +L  M   GCKPN 
Sbjct: 415 CQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNT 474

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  +LKGLC   R  +A +++  +   G   +  T+  +++  CK G   +A+ELL +
Sbjct: 475 ISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 534

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G +P++++++T+ +G  K G   + + LL +M  +   P+ I YS++ + L + G+
Sbjct: 535 MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 594

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I   + +F  +       D  + N+++  LC +   E+     A +    M     V + 
Sbjct: 595 INKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER-----AIEFLAYMVSSGCVPNE 649

Query: 371 GTYGIVIRTLGKGKKTDEA 389
            TY I+IR L       EA
Sbjct: 650 STYTILIRGLASEGFVKEA 668



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 134/269 (49%), Gaps = 8/269 (2%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            VDR+        I++ + + + G    V  +  ++         + AV      ++ G 
Sbjct: 419 LVDRV--------IELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 470

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            PN+ +++I+++  C+   + +A  ++  M   G   N  TF  L+N LCK G +++A+E
Sbjct: 471 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 530

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +L QM   GC P++ +Y+ ++ GL   G+ +EA E+L  + N G+ P+   Y+++     
Sbjct: 531 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 590

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + GR N+ +++ +   +  +  + V +N + +  CK G   + +  L  M    C+P++ 
Sbjct: 591 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 650

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +Y+ L+ GL   G ++ A  +  E+   G
Sbjct: 651 TYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 132/296 (44%), Gaps = 13/296 (4%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+ SLC +GR  EA   L   G       +  YN ++ G C  G++E A  +   V    
Sbjct: 101 LIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLESARRLAAAVP--- 154

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + P+ YTY  V+   C  GR  +A+ +L+E   RG  P    ++ +    C+ G     V
Sbjct: 155 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 214

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +L+ +  R C  D  + + +LN +   G +  A+ + +++  FG E D    N++L+GL
Sbjct: 215 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 274

Query: 341 CM-KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           CM K W          ++ E+M +     +  T+  +I  L +    +     L   +E 
Sbjct: 275 CMAKRW------GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH 328

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
           G  P    +  +I  +C EG ++ A  +L  M  +   P+   Y+ L+  L   E+
Sbjct: 329 GCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAER 384


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 213/411 (51%), Gaps = 9/411 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
             E +D+F  +       S+ DF  LL  +  +   +  +  F +    G++P  +T +I
Sbjct: 63  FNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNI 122

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++ C C  +    A   +  M   G+ P++ TFT L++  C   R+++AL + DQ+  +G
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG 182

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+ TY  L+  LC    +  A E+   + ++G++P+V TY +++ G C++GR ++A 
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAA 242

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL + ++RG+ PNV+TF  L + + K G  M+   L K+M + +  PD  +Y+ L+NGL
Sbjct: 243 WLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGL 302

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
             +G++  A  +F  M   G+  +E    +L+ G C     +   +ED  ++F +M++K 
Sbjct: 303 CTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFC-----KSKRVEDGTKIFYEMSQKG 357

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            V +  TY ++I+      + D A    +        P   T+N ++  LC  G ++KAL
Sbjct: 358 LVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKAL 417

Query: 426 LLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDA-CALYGAALKQGVI 472
           ++   M +     +  +Y ++I    K+ ++E ++D  C+L+   +K  VI
Sbjct: 418 MIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVI 468



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 206/404 (50%), Gaps = 5/404 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +F+ ++  G +  +   N ++  +   ++   A  F  +    G  P+  TF+ ++  
Sbjct: 102 ISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHG 161

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C+ N   +A  + D +   G+ PNV T+T L++ LCK+  L  A+E+ +QMG  G +PN
Sbjct: 162 FCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPN 221

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TYN L+ GLC +GR  +A  +L ++   G++P+V T+TA++D F KVG+  EA EL  
Sbjct: 222 VVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYK 281

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             I+  V P+V T+  L NG C  G   +   +  LM+     P++++Y+TL++G  K  
Sbjct: 282 VMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSK 341

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++     IF EM + G   +      L++G C+    +      A +VF +M  + +  D
Sbjct: 342 RVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDV-----AQEVFNQMGSRRAPPD 396

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY +++  L      ++AL+   +  +       +T+  +IQ +C  GK++ A  L  
Sbjct: 397 IRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFC 456

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++     P+  +Y  +I+   +    ++A AL+    + G +P
Sbjct: 457 SLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLP 500



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 40/376 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ + +FD I   G   +V  +  L+  L        AV+ F++    G+ PN  T++ 
Sbjct: 168 IEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNS 227

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C    + +A  ++  M   G  PNV TFT L+++  K G++ EA E+   M ++ 
Sbjct: 228 LVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMS 287

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ TY  L+ GLC  GR++EA +M   ++++G  P+  TYT ++ GFCK  R  +  
Sbjct: 288 VYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGT 347

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++  E  ++G+  N +T+  L  GYC  G P     +   M  R   PD  +Y+ LL+GL
Sbjct: 348 KIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGL 407

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G +  A+ IFK M +   +++      +++G+C     +   +EDA+ +F  +    
Sbjct: 408 CYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMC-----KVGKVEDAFDLFCSL---- 458

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
                           KG K                 P  IT+  +I   C  G I +A 
Sbjct: 459 --------------FSKGMK-----------------PNVITYTTMISGFCRRGFIHEAD 487

Query: 426 LLLFLMYEHAKIPSRT 441
            L   M E   +P+ +
Sbjct: 488 ALFKKMKEDGFLPNES 503



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 5/300 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   ++IF+ +  +G   +V  +N L+  L  +     A     +    G+ PN  
Sbjct: 199 KNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVI 258

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +       EA+++   M     +P+V T+T L+N LC  GRL EA ++   M
Sbjct: 259 TFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLM 318

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN  TY  L+ G C   RVE+  ++   +   GL  +  TYT ++ G+C VGR 
Sbjct: 319 ESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRP 378

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A E+ N+   R   P++ T+N L +G C  G   K + + K M+KR    + ++Y+ +
Sbjct: 379 DVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTII 438

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G+ K GK+  A  +F  +   G + +     +++ G C      +  + +A  +F+KM
Sbjct: 439 IQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC-----RRGFIHEADALFKKM 493



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 117/235 (49%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   + E  +++  + +      V  +  L+  L      + A + F    S G  PN 
Sbjct: 268 VKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNE 327

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I  +C      +  K+   M   G   N  T+T+L+   C  GR   A EV +Q
Sbjct: 328 VTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQ 387

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           MG     P+I+TYN LL GLCY G VE+A  +   ++   +  ++ TYT ++ G CKVG+
Sbjct: 388 MGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGK 447

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
             +A +L      +G+ PNV+T+ T+ +G+C+ G   +   L K MK+   LP++
Sbjct: 448 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNE 502



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 164/388 (42%), Gaps = 52/388 (13%)

Query: 110 EASSYGLAP--NSWTFSIMIRCYCNKN----------DFFEARKVIDCMFDNGYHPNVTT 157
           + S++G +P  +   F   IR + N             F EA  +   M  +   P++  
Sbjct: 25  QISNHGASPTLSLCGFCFWIRAFSNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVD 84

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           FT L++ + K  R    + + +QM  +G  P + T N ++  +C   +   A   L  + 
Sbjct: 85  FTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMM 144

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF-------------- 263
             G +PD+ T+T+++ GFC   R  +A+ L ++ +  G  PNVVT+              
Sbjct: 145 KLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLN 204

Query: 264 ---------------------NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
                                N+L +G C+ G       LL+ M KR   P+ I+++ L+
Sbjct: 205 HAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALI 264

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +  +K GKI  A  ++K M++     D     +L+ GLC         L++A Q+F  M 
Sbjct: 265 DAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYG-----RLDEARQMFYLME 319

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
                 +  TY  +I    K K+ ++     +   + G +  TIT+  +IQ  C  G+ D
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKL 450
            A  +   M      P   +Y++L+  L
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGL 407



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 19/239 (7%)

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           NEA++L    +     P++V F  L +   K       + L + M+     P   + + +
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +N + +  +   A     +M++ GFE D     SLL G C   W     +EDA  +F+++
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFC--HWNR---IEDALALFDQI 178

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-------GHIPRTITFNNVIQA 414
                  +  TY  +I  L K +       HL+HA+E+       G  P  +T+N+++  
Sbjct: 179 VGMGFRPNVVTYTTLIHCLCKNR-------HLNHAVEIFNQMGDNGIRPNVVTYNSLVSG 231

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LC  G+   A  LL  M +    P+  ++  LI    ++ K  +A  LY   ++  V P
Sbjct: 232 LCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYP 290


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 210/404 (51%), Gaps = 5/404 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +F+ ++  G    +   N ++  + + ++   A  F  +    G  P+  TF+ ++  
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG 162

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC+ N   +A  + D +   G+ PNV T+T L+  LCK+  L  A+E+ +QMG  G +PN
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TYN L+ GLC +GR  +A  +L ++    ++P+V T+TA++D F KVG+  EA EL N
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             I+  V P+V T+ +L NG C  G   +   +  LM++  C P+++ Y+TL++G  K  
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++   + IF EM + G   +      L++G C+    +      A +VF +M+ + +  D
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV-----AQEVFNQMSSRRAPPD 397

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY +++  L    K ++AL+   +  +       +T+  +IQ +C  GK++ A  L  
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++     P+  +Y  +I+   +    ++A +L+    + G +P
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 209/411 (50%), Gaps = 9/411 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
             + +D+F  +       S+ DF  LL  +  +N  +  +  F +    G+ P   T +I
Sbjct: 64  FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++ C C  +    A   +  M   G+ P++ TFT L+N  C   R+++A+ + DQ+  +G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KPN+ TY  L++ LC    +  A E+   +  +G +P+V TY A++ G C++GR  +A 
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL + ++R + PNV+TF  L + + K G  M+   L  +M + +  PD  +Y +L+NGL
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
             +G +  A  +F  M R G   +E +  +L+ G C     +   +ED  ++F +M++K 
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFC-----KSKRVEDGMKIFYEMSQKG 358

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            V +  TY ++I+      + D A    +        P   T+N ++  LC  GK++KAL
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418

Query: 426 LLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDA-CALYGAALKQGVI 472
           ++   M +     +  +Y ++I    KL ++E ++D  C+L+   +K  VI
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 172/378 (45%), Gaps = 40/378 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ I +FD I   G   +V  +  L+  L        AV+ F++  + G  PN  T++ 
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C    + +A  ++  M      PNV TFT L+++  K G+L EA E+ + M ++ 
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ TY  L+ GLC  G ++EA +M   ++ +G  P+   YT ++ GFCK  R  + M
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++  E  ++GV  N +T+  L  GYC  G P     +   M  R   PD  +Y+ LL+GL
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              GK+  A+ IF+ M +   +++      +++G+C     +   +EDA+ +F  +  K 
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC-----KLGKVEDAFDLFCSLFSK- 462

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
                                             G  P  IT+  +I   C  G I +A 
Sbjct: 463 ----------------------------------GMKPNVITYTTMISGFCRRGLIHEAD 488

Query: 426 LLLFLMYEHAKIPSRTSY 443
            L   M E   +P+ + Y
Sbjct: 489 SLFKKMKEDGFLPNESVY 506



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 117/238 (49%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L E  ++++ + +      V  +  L+  L M    + A + F      G  PN 
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             ++ +I  +C      +  K+   M   G   N  T+T+L+   C  GR   A EV +Q
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M      P+I+TYN LL GLC  G+VE+A  +   ++   +  ++ TYT ++ G CK+G+
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
             +A +L      +G+ PNV+T+ T+ +G+C+ G   +   L K MK+   LP++  Y
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 5/303 (1%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +  +AL++  +M      P+I  +  LL  +  + R +    +   ++  G+ P + T  
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            VM   C   +   A   L + ++ G  P++VTF +L NGYC        + L   +   
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P+ ++Y+TL+  L K   +  AV +F +M   G   +    N+L+ GLC     E  
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC-----EIG 237

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
              DA  +   M K+    +  T+  +I    K  K  EA    +  I+M   P   T+ 
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           ++I  LC  G +D+A  + +LM  +   P+   Y  LI    + ++  D   ++    ++
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357

Query: 470 GVI 472
           GV+
Sbjct: 358 GVV 360


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 206/426 (48%), Gaps = 23/426 (5%)

Query: 53  QAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
            A + +DR+  SP                   V  +N +L  L    + + A++      
Sbjct: 198 SALQLLDRMSVSP------------------DVVTYNTILRTLCDSGKLKEAMEVLDRQM 239

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
                P+  T++I+I   C ++   +A K++D M D G  P+V T+ +L+N +CK GRL 
Sbjct: 240 QRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLD 299

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           EA+  L+ M   GC+PN+ T+N +L+ +C  GR  +A + L  +   G  P V T+  ++
Sbjct: 300 EAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILI 359

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           +  C+ G    A+++L +  + G TPN +++N L +  CK+    + +  L +M  R C 
Sbjct: 360 NFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCY 419

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD ++Y+TLL  L K GK+  AV I  ++   G        N+++ GL      +    +
Sbjct: 420 PDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL-----SKVGKTD 474

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           DA ++ ++M  K    D  TY  ++  L +  K DEA+   H   EMG  P  IT+N+++
Sbjct: 475 DAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIM 534

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             LC   +  +A+  L  M      P+ TSY +LI  L     + +A  L      +GV+
Sbjct: 535 LGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVV 594

Query: 473 PQRKPQ 478
            +   +
Sbjct: 595 KKSSAE 600



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 197/385 (51%), Gaps = 8/385 (2%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N+ L  LV   E E   KF  +    G  P+    + +IR  C     ++A +V++ + D
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           +G  P+V T+ +L++  CK+G +  AL++LD   R+   P++ TYN +L+ LC  G+++E
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLD---RMSVSPDVVTYNTILRTLCDSGKLKE 230

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A E+L         PDV TYT +++  CK     +AM+LL+E  ++G  P+VVT+N L N
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 290

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G CKEG   + +  L  M    C P+ I+++ +L  +   G+   A     EM+R G   
Sbjct: 291 GICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSP 350

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                N L+  LC      K L+  A  V EKM +     +  +Y  ++  L K KK + 
Sbjct: 351 SVVTFNILINFLC-----RKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMER 405

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A+ +L   +  G  P  +T+N ++ ALC +GK+D A+ +L  +      P   +Y+ +I 
Sbjct: 406 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 465

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L ++ K+ DA  L      +G+ P
Sbjct: 466 GLSKVGKTDDAIKLLDEMKGKGLKP 490



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 146/281 (51%), Gaps = 14/281 (4%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           + G + SV  FN L+  L        A+    +   +G  PNS +++ ++   C      
Sbjct: 345 RKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKME 404

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
            A + +D M   G +P++ T+  L+ +LCK G++  A+E+L+Q+G  GC P + TYN ++
Sbjct: 405 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVI 464

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            GL  VG+ ++A ++L  +K  GLKPD+ TY+ ++ G  + G+ +EA+   ++  E GV 
Sbjct: 465 DGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVK 524

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PN +T+N++  G CK    ++ +  L  M  R C P + SY  L+ GL   G  + A+ +
Sbjct: 525 PNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALEL 584

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
             E+                RG+  KS  E+ +++  + VF
Sbjct: 585 LNELCS--------------RGVVKKSSAEQVVVKIPFNVF 611



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 170/352 (48%), Gaps = 40/352 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S + + + + D ++  G    V  +N L+  +      + A++F +   SYG  PN  
Sbjct: 259 KESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVI 318

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T +I++R  C+   + +A K +  M   G  P+V TF IL+N LC+ G +  A++VL++M
Sbjct: 319 THNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKM 378

Query: 182 GRIGCKPN-----------------------------------IQTYNCLLKGLCYVGRV 206
            + GC PN                                   I TYN LL  LC  G+V
Sbjct: 379 PQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 438

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           + A E+L  + + G  P + TY  V+DG  KVG++++A++LL+E   +G+ P+++T++TL
Sbjct: 439 DVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTL 498

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             G  +EG   + +     +++    P+ I+Y++++ GL K  +   A+     MV  G 
Sbjct: 499 VGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGC 558

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           +  E     L+ GL  +      L ++A ++  ++  +  V       +V++
Sbjct: 559 KPTETSYMILIEGLAYEG-----LAKEALELLNELCSRGVVKKSSAEQVVVK 605


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 214/451 (47%), Gaps = 16/451 (3%)

Query: 21  NKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLK--ERIDIFDSIKK 78
           N +P  + +     +SL T  S     NP   Q   F+   K   +     +  F  + +
Sbjct: 6   NTVPSASSIRNSNLSSLFTHSSAIPSPNP---QIAFFLRHCKTGNVTATHALHFFHLMMR 62

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
                S+S FN LL  L  +         +++    GL+ +  T +I++ C CN N   E
Sbjct: 63  STPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLRE 122

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
                  +   GY PN+ T+  L+  LC   R+ EA  +  +M ++GC P++ TY  L+K
Sbjct: 123 GFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIK 182

Query: 199 GLCYVGRVEEAYEMLMNVKND------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           GLC  G +  A ++   + ND        KP+V TY  ++DG CKVGR +EA +L  E  
Sbjct: 183 GLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMK 242

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
            +G+ P+++++N+L +G+C  G   +   LL  M  +   PD ++++ L++ L K GK+ 
Sbjct: 243 TQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVI 302

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A  +   M+  G   D    NSL+ G CM        L  A ++F  M  K    D  +
Sbjct: 303 EAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD-----LNSARELFVSMPSKGCEPDVIS 357

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y ++I    K  K +EA+   +  + +G  P  IT++++++ +   GK+D A  L  +M 
Sbjct: 358 YNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK 417

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            H    +  +Y + +  L + +  ++A  L+
Sbjct: 418 AHGIAENSYTYGIFLDGLCKNDCLFEAMKLF 448



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 200/377 (53%), Gaps = 6/377 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +N ++  L  +  ++ A + F E  + G+ P+  +++ +I  +C    + E+++++
Sbjct: 214 NVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLL 273

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M D G  P++ TF +L+++LCK G++ EA ++L  M   G  P++ TYN L++G C V
Sbjct: 274 DEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMV 333

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G +  A E+ +++ + G +PDV +Y  +++G+ K  +  EAM+L NE +  G  PNV+T+
Sbjct: 334 GDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITY 393

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           ++L  G    G       L  +MK      +  +Y   L+GL K   +  A+ +F E+  
Sbjct: 394 DSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKS 453

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
             F+++   +N L+ GLC     +   LE A+++FEK++ +    +  TY I+I    + 
Sbjct: 454 SNFKLEIENLNCLIDGLC-----KAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCRE 508

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + D+A + +      G  P  IT+N +++      K+++ + LL  M +    P   + 
Sbjct: 509 GQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITC 568

Query: 444 DMLITKLDQLEKSYDAC 460
            +++  L + EK Y  C
Sbjct: 569 SIVVDMLSKDEK-YQEC 584



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 206/449 (45%), Gaps = 46/449 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E    F  I + G + ++  +N L+  L M +    A + F      G  P+  T+  
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179

Query: 126 MIRCYCNKNDFFEARKVIDCMFDN------GYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           +I+  C   +   A K+   M ++         PNV T+ I+V+ LCK GR  EA ++ +
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M   G  P+I +YN L+ G C  G+ EE+  +L  + + GL+PD+ T+  ++D  CK G
Sbjct: 240 EMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEG 299

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           +  EA +LL   IE G+ P++VT+N+L  G+C  G       L   M  + C PD ISY+
Sbjct: 300 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 359

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L+NG  K  K+  A+ ++ EM+  G   +    +SLL+G+ +        ++DA ++F 
Sbjct: 360 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK-----VDDAKKLFS 414

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI---------------------------- 391
            M       +  TYGI +  L K     EA+                             
Sbjct: 415 VMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAG 474

Query: 392 HLHHAIEM-------GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
            L  A E+       GH P  +T+  +I   C EG++DKA +L+  M  +   P   +Y+
Sbjct: 475 KLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYN 534

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            L+    +  K  +   L     ++ V P
Sbjct: 535 TLMRGFYESNKLEEVVQLLHRMAQKDVSP 563



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 168/361 (46%), Gaps = 5/361 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   +F+ +K  G   S+  +N L+       + E + +   E    GL P+  TF+++I
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLI 292

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    EA+K++  M ++G  P++ T+  L+   C  G L  A E+   M   GC+
Sbjct: 293 DTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCE 352

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++ +YN L+ G     +VEEA ++   +   G +P+V TY +++ G    G+ ++A +L
Sbjct: 353 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKL 412

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +     G+  N  T+    +G CK     + + L   +K  N   +  + + L++GL K
Sbjct: 413 FSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCK 472

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK+  A  +F+++   G E +      ++ G C +   +K     A  + +KM      
Sbjct: 473 AGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDK-----ANVLIQKMEANGCT 527

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  TY  ++R   +  K +E +  LH   +    P  IT + V+  L  + K  + L L
Sbjct: 528 PDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL 587

Query: 428 L 428
           L
Sbjct: 588 L 588



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 150/328 (45%), Gaps = 13/328 (3%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++++F  L++ L K     +   + +QM   G   +  T N LL  LC V R+ E +  
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G  P++ TY  ++ G C   R +EA  L     + G TP+VVT+ TL  G C 
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 273 EGTPMKGVGLLKLM------KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            G     + L + M       + NC P+ I+Y+ +++GL K G+   A  +F+EM   G 
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 327 EVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                  NSL+ G C    WEE   L D      +M  +    D  T+ ++I TL K  K
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLD------EMLDQGLQPDMVTFNVLIDTLCKEGK 300

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             EA   L   IE G +P  +T+N++I+  C  G ++ A  L   M      P   SY++
Sbjct: 301 VIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 360

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           LI    +  K  +A  LY   L  G  P
Sbjct: 361 LINGYSKTLKVEEAMKLYNEMLLVGKRP 388



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 112/201 (55%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E + +++ +   G   +V  ++ LL  + +  + + A K FS   ++G+A NS+
Sbjct: 367 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 426

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ I +   C  +  FEA K+   +  + +   +     L++ LCK+G+L+ A E+ +++
Sbjct: 427 TYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKL 486

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +PN+ TY  ++ G C  G+V++A  ++  ++ +G  PD+ TY  +M GF +  + 
Sbjct: 487 SNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKL 546

Query: 242 NEAMELLNEAIERGVTPNVVT 262
            E ++LL+   ++ V+P+ +T
Sbjct: 547 EEVVQLLHRMAQKDVSPDAIT 567



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 1/158 (0%)

Query: 57  FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           F+D + K   L E + +F  +K       + + N L+  L    + ETA + F + S+ G
Sbjct: 431 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 490

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
             PN  T++IMI  +C +    +A  +I  M  NG  P++ T+  L+    +S +L+E +
Sbjct: 491 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 550

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           ++L +M +    P+  T + ++  L    + +E   +L
Sbjct: 551 QLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 188/355 (52%), Gaps = 7/355 (1%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+ +TF++MI  +C       A ++   M D G  P++ T+ I+++  C++ R+ +A ++
Sbjct: 374 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 433

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L++M   GC P++ TYN ++ GLC   +V+EAYE+   ++N G   DV T + ++DG CK
Sbjct: 434 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 493

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R ++A +LL E    G  P+VV +  L +G+CK     K +     M  + C+P  I+
Sbjct: 494 SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVIT 553

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           YS +++ L K  ++R    + K M+  G   D  +  S++ GLC     + D  ++AY++
Sbjct: 554 YSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLC-----KSDSYDEAYEL 608

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-GHIPRTITFNNVIQALC 416
           ++ M +        TY +++  L K  + DEA IHL   +E  G +P T+T+N+V     
Sbjct: 609 YKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEA-IHLLEVMESDGCLPDTVTYNSVFDGFW 667

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
              + DKA  L   M      P+   Y +L+TKL   EK   A  ++  AL+ G 
Sbjct: 668 KSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGA 722



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 209/446 (46%), Gaps = 46/446 (10%)

Query: 66  LKERIDIFD-SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           L + +  FD    + G   S    N LL A V   + + A   F        +P+S T+S
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYS 171

Query: 125 IMIRCYCNKNDFFEARKVIDCM-------------------FDNGY-------------- 151
            +I  +C   DF +A +++D M                    DNG               
Sbjct: 172 TLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN 231

Query: 152 -HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             P+V T+TILV++LCKS R+ +A  +L+ M   GC PN+ TYN L+ G C +G ++EA 
Sbjct: 232 CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 291

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +  +   PDV+TY  ++DG+CK  R  +  +LL E ++ G  PN +T+NTL +  
Sbjct: 292 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 351

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
            K G  +    L ++M +R+C P   +++ +++   K G++  A  +F+ M   G   D 
Sbjct: 352 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 411

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N ++ G C       + ++DA Q+ E+MT+     D  TY  ++  L K  + DEA 
Sbjct: 412 YTYNIMISGAC-----RANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAY 466

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI--- 447
                    G+    +T + +I  LC   ++D A  LL  M  +   P   +Y +LI   
Sbjct: 467 EVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 526

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
            K DQL+KS    A +   L +G +P
Sbjct: 527 CKADQLDKSL---AFFSEMLDKGCVP 549



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 213/433 (49%), Gaps = 8/433 (1%)

Query: 44  DLKEN--PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNE 100
           D++ N  P  +     VD + K++ + +   I + + + G   +V  +N L+     L  
Sbjct: 227 DMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGN 286

Query: 101 QETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
            + AV  F++      +P+ +T++I+I  YC +    +  K++  M   G  PN  T+  
Sbjct: 287 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNT 346

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L++SL KSG+  +A  +   M R  CKP+  T+N ++   C VG+++ AYE+   + + G
Sbjct: 347 LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG 406

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
             PD+YTY  ++ G C+  R ++A +LL    E G  P+VVT+N++ +G CK     +  
Sbjct: 407 CLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAY 466

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            + ++++      D ++ STL++GL K  ++  A  + +EM R G   D      L+ G 
Sbjct: 467 EVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 526

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     + D L+ +   F +M  K  V    TY IVI  L K  +  +  + L   +E G
Sbjct: 527 C-----KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 581

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
             P  I + +VI  LC     D+A  L  LM +    P+  +Y++L+ KL ++ +  +A 
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAI 641

Query: 461 ALYGAALKQGVIP 473
            L       G +P
Sbjct: 642 HLLEVMESDGCLP 654



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 169/353 (47%), Gaps = 10/353 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L    ++F  +   G    +  +N ++      N  + A +     +  G  P+  
Sbjct: 388 KVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV 447

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C  +   EA +V + + + GY  +V T + L++ LCKS RL +A ++L +M
Sbjct: 448 TYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM 507

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  P++  Y  L+ G C   +++++      + + G  P V TY+ V+D  CK  R 
Sbjct: 508 ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 567

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +   LL   +ERGVTP+ + + ++ +G CK  +  +   L KLMK+  C P  ++Y+ L
Sbjct: 568 RDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVL 627

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K  ++  A+ + + M   G   D    NS+  G   KS E     + A+++F+ M
Sbjct: 628 VDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGF-WKSAEH----DKAFRLFQAM 682

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG-----HIPRTITFN 409
             +     P  Y +++  L   +K D+A+     A+E G      I RT+  N
Sbjct: 683 KSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTLQQN 735



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 153/316 (48%), Gaps = 20/316 (6%)

Query: 169 GRLKEALEVLDQ--------MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           GR+ + L+ LD+         G+ G K +  T NCLL       + +EAY++  N +   
Sbjct: 103 GRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGL 162

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
             PD  TY+ +++GFCK     +A  LL+E  +RG+ P+   +NT+  G C  G     +
Sbjct: 163 CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 222

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
              + M +RNC P  I+Y+ L++ L K  +I  A  I ++M+  G   +    N+L+ G 
Sbjct: 223 VHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGF 281

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     +   +++A  +F +M +     D  TY I+I    K ++  +    L   ++ G
Sbjct: 282 C-----KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYG 336

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSY 457
             P  IT+N ++ +L   GK   A  L  +M      PS  +++++I    K+ QL+ +Y
Sbjct: 337 CEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAY 396

Query: 458 DACALYGAALKQGVIP 473
           +   L+     +G +P
Sbjct: 397 E---LFQLMTDRGCLP 409


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 208/438 (47%), Gaps = 77/438 (17%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ DF  LL ++  +    T +   ++  S+G+ PN +T +I+I  +C+ N    A  V+
Sbjct: 55  SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVL 114

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   G+ P+ TTFT L+  LC  G++ EAL + D+M   G +PN+ TY  L+ GLC V
Sbjct: 115 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 174

Query: 204 G-----------------------------------RVEEAYEMLMNVKNDGLKPDVYTY 228
           G                                   +V EA+ +   +   G+ PD++TY
Sbjct: 175 GNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTY 234

Query: 229 TA-----------------------------------VMDGFCKVGRSNEAMELLNEAIE 253
           T+                                   V+D  CK G+  EA E+++  I+
Sbjct: 235 TSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ 294

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RGV P+VVT+ TL +G+C +    + V +  +M ++   PD ISY+TL+NG  K  KI  
Sbjct: 295 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDK 354

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A+ +F+EM R  +  D +  N+L+ GLC         L+DA  +F +M  +  + D  TY
Sbjct: 355 AMYLFEEMCRKEWIPDTKTYNTLMHGLC-----HVGRLQDAIALFHEMVARGQMPDLVTY 409

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMY 432
            I++ +L K    +EA+  L  AIE  ++ P    +N +I  +C  G+++ A  L   + 
Sbjct: 410 SILLDSLCKNCHLEEAMA-LLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLS 468

Query: 433 EHAKIPSRTSYDMLITKL 450
                PS  +Y+++I  L
Sbjct: 469 SKGLHPSVWTYNIMIHGL 486



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 175/369 (47%), Gaps = 6/369 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  ++F  +   G +  +  +  L+ AL  L E +      ++  +  + P+  
Sbjct: 208 KDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVV 267

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            FS ++   C +    EA +++D M   G  P+V T+T L++  C    + EA++V D M
Sbjct: 268 IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 327

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  P++ +Y  L+ G C + ++++A  +   +      PD  TY  +M G C VGR 
Sbjct: 328 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRL 387

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L +E + RG  P++VT++ L +  CK     + + LLK ++  N  PD   Y+ +
Sbjct: 388 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNII 447

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G+ + G++  A  +F  +   G        N ++ GLC     ++ LL +A ++F +M
Sbjct: 448 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLC-----KRGLLNEANKLFMEM 502

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  D  TY  + R   +  +T  A+  L   +  G      T   +++ L  +G +
Sbjct: 503 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG-L 561

Query: 422 DKALLLLFL 430
           D++   L L
Sbjct: 562 DQSSCFLML 570



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 155/325 (47%), Gaps = 7/325 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  F  L+ S+ K       L +  QM   G  PN+ T N L+   C++ RV  A+ +
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +PD  T+T ++ G C  G+  EA+ L ++ I+ G  PNVVT+ TL NG CK
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     + LL+ M++ NC PD + Y+++++ L K  ++  A ++F +MV  G   D   
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 333 MNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             SL+  LC +  W+    L        +M     + D   +  V+  L K  K  EA  
Sbjct: 234 YTSLVHALCNLCEWKHVTTL------LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHE 287

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            +   I+ G  P  +T+  ++   C + ++D+A+ +  +M      P   SY  LI    
Sbjct: 288 IVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYC 347

Query: 452 QLEKSYDACALYGAALKQGVIPQRK 476
           ++ K   A  L+    ++  IP  K
Sbjct: 348 KIHKIDKAMYLFEEMCRKEWIPDTK 372



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 73/155 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E + +  +I+    N  +  +N ++  +    E E A   FS  SS GL P+ W
Sbjct: 418 KNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVW 477

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++IMI   C +    EA K+   M  N   P+  T+  +     ++     A+++L++M
Sbjct: 478 TYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 537

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
              G   ++ T   L++ L   G  + +  ++++V
Sbjct: 538 LARGFSADVSTTTLLVEMLSDDGLDQSSCFLMLSV 572


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 207/415 (49%), Gaps = 23/415 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE + +  ++   G   ++  +N ++  L          +   E    GL P+  
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  +C + +  +   ++  M   G  PNV T+T L+N +CK+G L  A+E+ DQM
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +PN +TY  L+ G C  G + EAY++L  +   G  P V TY A++ G+C +GR 
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA+ +L   +ERG+ P+VV+++T+  G+C+E    K   + + M ++  LPD ++YS+L
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL    K+  A  +F+EM+R G   DE    SL+   C+        L  A ++ ++M
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGE-----LSKALRLHDEM 548

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ-------- 413
            ++  + D  TY ++I  L K  +T  A   L        +P  +T+N +I+        
Sbjct: 549 VQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFK 608

Query: 414 -------ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYD 458
                    C +G +++A  +   M +    P+   Y+++I   ++   + K+Y+
Sbjct: 609 SVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYN 663



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 207/410 (50%), Gaps = 35/410 (8%)

Query: 78  KDGTNWSVSDFNDLLMALVMLN-----EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           + G   +V  +N +L AL+  +     + + A + F +    G++PN +T++++IR   +
Sbjct: 160 RHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVS 219

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           + D  +    +  M   G  PNV T+  L+++ CK  ++KEA+ +L  M   G   N+ +
Sbjct: 220 QGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLIS 279

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN ++ GLC  GR+ E  E++  ++  GL PD  TY  +++GFCK G  ++ + LL+E +
Sbjct: 280 YNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMV 339

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
            +G++PNVVT+ TL N  CK G   + V +   M+ R   P++ +Y+TL++G  + G + 
Sbjct: 340 GKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMN 399

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLC-----------MKSWEEKDLLED-------- 353
            A  +  EM+  GF       N+L+ G C           ++   E+ L  D        
Sbjct: 400 EAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVI 459

Query: 354 -----------AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
                      A+Q+ E+M +K  + D  TY  +I+ L   +K  EA       +  G  
Sbjct: 460 AGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLP 519

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           P  +T+ ++I A C +G++ KAL L   M +   +P   +Y +LI  L++
Sbjct: 520 PDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNK 569



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 200/387 (51%), Gaps = 5/387 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +    L++ +     ++K+G + +V  +N L+ A     + + A+      +  G+A N 
Sbjct: 218 VSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANL 277

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++ +I   C K    E  ++++ M   G  P+  T+  LVN  CK G L + L +L +
Sbjct: 278 ISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSE 337

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  PN+ TY  L+  +C  G +  A E+   ++  GL+P+  TYT ++DGFC+ G 
Sbjct: 338 MVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGL 397

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            NEA ++L+E I  G +P+VVT+N L +GYC  G   + VG+L+ M +R   PD +SYST
Sbjct: 398 MNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYST 457

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++ G  +  ++  A  + +EMV  G   D    +SL++GLC++       L +A+ +F +
Sbjct: 458 VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQK-----LVEAFDLFRE 512

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++    D  TY  +I       +  +AL      ++ G +P  +T++ +I  L  + +
Sbjct: 513 MMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKAR 572

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
              A  LL  ++    +P   +Y+ LI
Sbjct: 573 TKVAKRLLLKLFYEESVPDDVTYNTLI 599



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/337 (21%), Positives = 147/337 (43%), Gaps = 50/337 (14%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L   ++IFD ++  G   +   +  L+           A K  SE    G +P+  
Sbjct: 359 KAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVV 418

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  YC      EA  ++  M + G  P+V +++ ++   C+   L +A ++ ++M
Sbjct: 419 TYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEM 478

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TY+ L++GLC   ++ EA+++   +   GL PD  TYT++++ +C  G  
Sbjct: 479 VEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGEL 538

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNG-------------------------------- 269
           ++A+ L +E ++RG  P+ VT++ L NG                                
Sbjct: 539 SKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTL 598

Query: 270 ------------------YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
                             +C +G   +   + K M +RN  P+   Y+ +++G  + G +
Sbjct: 599 IENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNV 658

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
             A +++ E+    F      + +L++ L  +   ++
Sbjct: 659 HKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDE 695



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 124/261 (47%), Gaps = 10/261 (3%)

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN-----EAME 246
            ++ ++K L  +G V +A  +L      G  P V +Y AV+D   +   SN     +A  
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           +  + +  GV+PNV T+N +  G   +G   KG+G ++ M+K    P+ ++Y+TL++   
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K  K++ A+++ + M   G   +    NS++ GLC K       + +  ++ E+M  K  
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGR-----MSEVGELVEEMRGKGL 308

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           V D  TY  ++    K     + L+ L   +  G  P  +T+  +I  +C  G + +A+ 
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368

Query: 427 LLFLMYEHAKIPSRTSYDMLI 447
           +   M      P+  +Y  LI
Sbjct: 369 IFDQMRVRGLRPNERTYTTLI 389



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 15/263 (5%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L +  +   A   F E    GL P+  T++ +I  YC   +  +A ++ D M 
Sbjct: 490 YSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMV 549

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL---------- 197
             G+ P+  T+++L+N L K  R K A  +L ++      P+  TYN L+          
Sbjct: 550 QRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKS 609

Query: 198 -----KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
                KG C  G + EA  +   +     KP+   Y  ++ G  + G  ++A  L  E  
Sbjct: 610 VEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELE 669

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
                 + V    L     +EG   +   LL+ + +   L D      L+    K G + 
Sbjct: 670 HSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMD 729

Query: 313 PAVSIFKEMVRFGFEVDERMMNS 335
             +++  EM + G   D  + +S
Sbjct: 730 AVLNVLTEMAKDGLLPDGGIHSS 752



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 76/176 (43%)

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           +  ++  L + G +  A+++     R GF       N++L  L  +S       +DA +V
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           F  M +     +  TY ++IR +      ++ L  +    + G  P  +T+N +I A C 
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCK 254

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + K+ +A+ LL  M       +  SY+ +I  L    +  +   L      +G++P
Sbjct: 255 KKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP 310


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 213/427 (49%), Gaps = 5/427 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D + KA   +E + + D++       +   +  L+ +L      E A + 
Sbjct: 258 PDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEEL 317

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F   ++ G  PNS  ++ +I  +       EA  + D M + GY P+V T T++++ LCK
Sbjct: 318 FRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCK 377

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           SG  ++A +  ++M R GCKPN+ TY  +++GL  +GRV  A+ ++  +   G  PD  T
Sbjct: 378 SGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVT 437

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG-LLKLM 286
           Y  ++DGFCK+GR +EA +LL+E  +   +PN+  +++L NG C  G+  K +  L +  
Sbjct: 438 YICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQS 497

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           K      D     +++ GL K G++  A  IF+ MV  G + D    N L+ GLC +S E
Sbjct: 498 KAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLC-RSRE 556

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
            +  +E A+ +   + K   + D  TY  +   L K  + D A+  L  A   G     +
Sbjct: 557 NR--VERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVV 614

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
            +  +   LC +G++D+A+ L   M      P   +Y  +I  L +++K  DAC  +   
Sbjct: 615 AYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEM 674

Query: 467 LKQGVIP 473
           + +G  P
Sbjct: 675 IGKGQKP 681



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 202/427 (47%), Gaps = 8/427 (1%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R+L        +KA  +KE  ++F  ++K G       +N ++  L      + A+K   
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLD 284

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
              +    P   T+ I++   C       A ++   M  +G+ PN   +T L++   KSG
Sbjct: 285 NMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSG 344

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           R+KEA  + D+M   G +P++ T+  ++ GLC  G  E+A +    +   G KP+V TYT
Sbjct: 345 RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYT 404

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++ G  K+GR   A  ++   I  G  P+ VT+  L +G+CK G   +   LL  + K 
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKC 464

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE-VDERMMNSLLRGLCMKSWEEK 348
           +  P+   YS+L+NGL   G +   +    E  +   E +D  +  S++ GLC     + 
Sbjct: 465 SSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLC-----KT 519

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK--KTDEALIHLHHAIEMGHIPRTI 406
             L++A ++F++M  +    D  TY I+I  L + +  + + A   LH   ++G++P  +
Sbjct: 520 GRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAV 579

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           T+  +   LC  G++D+A+ +L             +Y  L T L    +   A +L+   
Sbjct: 580 TYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEM 639

Query: 467 LKQGVIP 473
           ++QG  P
Sbjct: 640 VRQGGAP 646



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 187/386 (48%), Gaps = 9/386 (2%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           ++ G    V  +N L+  LV             E    G+APN+++F+I+IR +      
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG-CKPNIQTYNC 195
            +A    + M      P++ TF ILV+ LCK+G  ++A EV  +M  +G   P+   +  
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           +++ L    RV+EA E+   ++  G  PD   Y  ++DG  K G + EA+++L+  + + 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             P  VT+  L N  CK GT  +   L ++M      P+ + Y++L++G  K G+++ A 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
           S+F EMV  G+  D      ++ GLC KS       E A + FE+M +     +  TY  
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLC-KSGN----FEQAAKSFEEMMRGGCKPNVVTYTT 405

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I+ L K  +   A   +   I  G  P ++T+  ++   C  G++D+A  LL  + + +
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465

Query: 436 KIPSRTSYDMLITKL---DQLEKSYD 458
             P+   Y  L+  L     +EK+ D
Sbjct: 466 SSPNLQLYSSLVNGLCDGGSVEKTLD 491



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 189/434 (43%), Gaps = 47/434 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+   ++    F+ + + G   +V  +  ++  L  +     A +      ++G  P+S 
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC--------------- 166
           T+  ++  +C      EA +++D +      PN+  ++ LVN LC               
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQ 496

Query: 167 ---------------------KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV-- 203
                                K+GRL EA  +  +M   GCKP+  TYN L+ GLC    
Sbjct: 497 SKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            RVE A+ +L +++  G  PD  TYT +  G CK+G  + A+++L EA  RG   +VV +
Sbjct: 557 NRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAY 616

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             L  G C +G   + V L + M ++   PD  +Y  ++NGL+K  K+  A   F EM+ 
Sbjct: 617 TALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIG 676

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS-VTDPGTYGIVIRTLGK 382
            G +       +L++ LC         +++A+  FE M  +   V     Y  +I    K
Sbjct: 677 KGQKPTVATYTALVQALCHAGN-----VDEAFHRFESMLARGELVGSVMIYDALIHGFCK 731

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
             K D AL      I  G++P  +T  ++   L   GK +KA  LL  M      P   +
Sbjct: 732 ALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAAT 791

Query: 443 YDMLITKLDQLEKS 456
           +  +   LD L KS
Sbjct: 792 FTAI---LDGLRKS 802



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 183/421 (43%), Gaps = 42/421 (9%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP-NSWTFSIM 126
           + +  F+ +K+      +  F  L+  L      E A + F E  + G  P +    + M
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +R         EAR+V   M   G+ P+   +  +++ L K+G  +EAL+VLD M    C
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P   TY  L+  LC  G +E A E+   +   G +P+   YT+++ GF K GR  EA  
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEG-------------------------TPMKGVG 281
           L +E +E G  P+V+T   + +G CK G                         T ++G+ 
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411

Query: 282 ----------LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
                     ++K M    C PD ++Y  LL+G  K G++  A  +  E+ +     + +
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
           + +SL+ GLC     EK L +    +FE+        DPG    +I  L K  + DEA  
Sbjct: 472 LYSSLVNGLCDGGSVEKTLDD----LFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACR 527

Query: 392 HLHHAIEMGHIPRTITFNNVIQALC--GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
                +  G  P   T+N +I  LC   E ++++A  LL  + +   +P   +Y  L   
Sbjct: 528 IFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIG 587

Query: 450 L 450
           L
Sbjct: 588 L 588



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 188/472 (39%), Gaps = 79/472 (16%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+   ++F  +   G   +   +  L+         + A   F E    G  P+  
Sbjct: 307 KAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVI 366

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T ++MI   C   +F +A K  + M   G  PNV T+T ++  L K GR+  A  ++  M
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM 426

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC----- 236
              GC P+  TY CLL G C +GR++EA ++L  +      P++  Y+++++G C     
Sbjct: 427 IAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSV 486

Query: 237 -------------------------------KVGRSNEAMELLNEAIERGVTPNVVTFNT 265
                                          K GR +EA  +    +  G  P+  T+N 
Sbjct: 487 EKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNI 546

Query: 266 LFNGYCK--EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           L NG C+  E    +   LL  ++K   LPD ++Y+ L  GL K G++  AV + +E   
Sbjct: 547 LINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASS 606

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G+  D     +L  GLC +   ++     A  +F++M ++    D   Y  +I  L K 
Sbjct: 607 RGWNADVVAYTALCTGLCYQGQVDR-----AVSLFQEMVRQGGAPDAAAYCCIINGLIKV 661

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG------------------------ 419
           KK ++A       I  G  P   T+  ++QALC  G                        
Sbjct: 662 KKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMI 721

Query: 420 ------------KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
                       K+D AL L   M     +P+  +   L   L +  K+  A
Sbjct: 722 YDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKA 773



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 94/459 (20%), Positives = 184/459 (40%), Gaps = 71/459 (15%)

Query: 39  TAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMAL--V 96
           TA S    +  R      FV R  A  +   ++    ++ DG++WSV +  ++L  +   
Sbjct: 26  TARSFPSGKPEREHLTPDFVRR--ADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQ 83

Query: 97  MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
           +L     AV    + +   ++   W                            G+  +V 
Sbjct: 84  VLGSHVAAVLRSLKVTGTAISFFRWAGE-----------------------QAGFQHDVF 120

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           T+  L+N L       +   + ++M + G  PN  ++N L++      R ++A      +
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT------------------- 257
           K    KPD++T+  ++D  CK G   +A E+ +E +  G                     
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240

Query: 258 -----------------PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
                            P+ + +NT+ +G  K G   + + +L  M  + C+P +++Y  
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+N L K G +  A  +F+ M   GF  +  +  SL+ G     + +   +++A  +F++
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHG-----FAKSGRMKEACSLFDE 355

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +     D  T+ ++I  L K    ++A       +  G  P  +T+  +IQ L   G+
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKS 456
           +  A  ++  M  H   P   +Y  L+    KL +L+++
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEA 454



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 1/249 (0%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           R + + ++    +   ++K G       +  L + L  + E + AVK   EASS G   +
Sbjct: 553 RSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNAD 612

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
              ++ +    C +     A  +   M   G  P+   +  ++N L K  +L++A +  D
Sbjct: 613 VVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFD 672

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKV 238
           +M   G KP + TY  L++ LC+ G V+EA+    ++   G L   V  Y A++ GFCK 
Sbjct: 673 EMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKA 732

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
            + + A++L  + I RG  P  VT  +LF+G  + G   K   LL+ M      P   ++
Sbjct: 733 LKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATF 792

Query: 299 STLLNGLLK 307
           + +L+GL K
Sbjct: 793 TAILDGLRK 801



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 119/254 (46%), Gaps = 4/254 (1%)

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G + DV+TY  +M+        ++   +  E ++ G+ PN  +FN L   + +       
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           V   ++MK++ C PD  ++  L++ L K G    A  +F EM+  GF   +R +++ +  
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM-- 231

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
             +++  +   +++A +VF +M K     D   Y  +I  L K     EAL  L + +  
Sbjct: 232 --VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
             +P  +T+  ++ +LC  G +++A  L  +M      P+   Y  LI    +  +  +A
Sbjct: 290 ACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349

Query: 460 CALYGAALKQGVIP 473
           C+L+   ++ G  P
Sbjct: 350 CSLFDEMVEAGYRP 363



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 1/182 (0%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +F  + + G     + +  ++  L+ + + E A KFF E    G  P   T++ +++ 
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692

Query: 130 YCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
            C+  +  EA    + M   G    +V  +  L++  CK+ ++  AL++ + M   G  P
Sbjct: 693 LCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
              T   L  GL   G+ E+A E+L  +   G  P   T+TA++DG  K   S + ++L+
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLV 812

Query: 249 NE 250
            E
Sbjct: 813 QE 814


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 197/392 (50%), Gaps = 5/392 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ +F  +L +LV +    TA+    +    G+ P+  T SI+I C+C+      +  V+
Sbjct: 131 SIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVL 190

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   GY PN    T L+  LC  G +K++L   D++   G + N  +Y  LL GLC +
Sbjct: 191 GKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKI 250

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A ++L  +++   +PDV  Y  ++DG CK    NEA +   E   RG+ P+V+T+
Sbjct: 251 GETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITY 310

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           +TL  G+C  G  M    LL  M  +N  PD  +Y+ L++ L K GK++ A ++   M +
Sbjct: 311 STLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTK 370

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G + +    ++L+ G C+        + +A Q+F  M +        +Y I+I  L KG
Sbjct: 371 EGVKPNVVTYSTLMDGYCLVGE-----VHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKG 425

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           K  DEA+  L   +    +P T+T+N++I  LC  G+I  AL L+  ++   +     +Y
Sbjct: 426 KSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITY 485

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
             L+  L + +    A AL+    ++G+ P +
Sbjct: 486 TSLLDGLCKNQNLDKAIALFMKMKERGIQPNK 517



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 191/362 (52%), Gaps = 5/362 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +   I+   T   V  +N ++  L        A  F++E +S G+ P+  T+S +I  
Sbjct: 257 IKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICG 316

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C       A  +++ M     +P+V T+TIL+++LCK G+LKEA  +L  M + G KPN
Sbjct: 317 FCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPN 376

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY+ L+ G C VG V  A ++   +    + P V +Y  +++G CK    +EAM LL 
Sbjct: 377 VVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLR 436

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E + + V PN VT+N+L +G CK G     + L+K +  R    D I+Y++LL+GL K  
Sbjct: 437 EMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQ 496

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +  A+++F +M   G + ++    +L+ GLC  +      L++A ++F+ +  K    D
Sbjct: 497 NLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGAR-----LKNAQKLFQHILVKGCCID 551

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY ++I  L K    DEAL       + G IP  +TF  +I++L  + + DKA  LL 
Sbjct: 552 VYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLH 611

Query: 430 LM 431
            M
Sbjct: 612 EM 613



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 204/410 (49%), Gaps = 5/410 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +   D +   G   +   +  LL  L  + E   A+K           P+   ++ 
Sbjct: 218 VKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNT 277

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA      M   G  P+V T++ L+   C +G+L  A  +L++M    
Sbjct: 278 IIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKN 337

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ TY  L+  LC  G+++EA  +L  +  +G+KP+V TY+ +MDG+C VG  + A 
Sbjct: 338 INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAK 397

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +  ++  V P+V ++N + NG CK  +  + + LL+ M  +N +P+ ++Y++L++GL
Sbjct: 398 QIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGL 457

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I  A+ + KE+   G   D     SLL GLC     +   L+ A  +F KM ++ 
Sbjct: 458 CKSGRITSALDLMKELHHRGQPADVITYTSLLDGLC-----KNQNLDKAIALFMKMKERG 512

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY  +I  L KG +   A     H +  G      T+N +I  LC EG +D+AL
Sbjct: 513 IQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEAL 572

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            +   M ++  IP   +++++I  L + +++  A  L    + +G++  R
Sbjct: 573 AMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLHFR 622



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 1/174 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D + K+  +   +D+   +   G    V  +  LL  L      + A+  
Sbjct: 445 PNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIAL 504

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F +    G+ PN +T++ +I   C       A+K+   +   G   +V T+ +++  LCK
Sbjct: 505 FMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCK 564

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
            G L EAL +  +M   GC P+  T+  +++ L      ++A ++L  +   GL
Sbjct: 565 EGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 199/390 (51%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           ++  FN ++     +     A  + S+    GL P+++T++ +I  +C       A +V 
Sbjct: 193 NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVF 252

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G   N  ++T L++ LC++GR+ EAL++   M    C P ++TY  L+  L   
Sbjct: 253 LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGS 312

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           GR  EA  +   +K  G +P+V+TYT ++DG CK  + +EA ++L+E  E+G+ P+VVT+
Sbjct: 313 GRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTY 372

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N L +GYCKEG       +L LM+  +C P+  +Y+ L+ GL K  K+  A+++  +M+ 
Sbjct: 373 NALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE 432

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                     NSL+ G C     + + LE AY++   M +   V D  TY + I TL K 
Sbjct: 433 RKLSPSLITYNSLIHGQC-----KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + +EA          G     + +  +I   C  GKID A  LL  M   A +P+  +Y
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++LI  L + +K  +A +L    L  GV P
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 192/373 (51%), Gaps = 5/373 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  + + G   +   + +L+  L        A+K F++ +     P   T++++I   
Sbjct: 250 EVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYAL 309

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
                  EA  + + M + G  PNV T+T+L++ LCK  ++ EA ++L +M   G  P++
Sbjct: 310 SGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L+ G C  G +++A+E+L  ++++   P+  TY  ++ G CK  + ++AM LLN+
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +ER ++P+++T+N+L +G CK         LL LM +   +PD+ +YS  ++ L K G+
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A ++F  +   G + +E +  +L+ G C     +   ++ AY + E+M     + + 
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYC-----KVGKIDVAYSLLERMLNDACLPNS 544

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY ++I  L K KK  EA   +   + MG  P  +T+  +I  +  +G  D AL +   
Sbjct: 545 YTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNH 604

Query: 431 MYEHAKIPSRTSY 443
           M      P   +Y
Sbjct: 605 MVSLGYQPDVCTY 617



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 199/412 (48%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E + +F  + +D    +V  +  L+ AL     +  A+  F+E    G  PN  
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I   C +N   EARK++  M + G  P+V T+  L++  CK G + +A E+LD M
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C PN +TYN L+ GLC   +V +A  +L  +    L P + TY +++ G CKV   
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A  LL+   E G+ P+  T++   +  CKEG   +   L   +K +    +++ Y+ L
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K GKI  A S+ + M+      +    N L+ GLC    +EK + E +  V + +
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLC----KEKKMKEASSLVAKML 571

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           T  V  T   TY I+I  + K    D AL   +H + +G+ P   T+   + A   +G +
Sbjct: 572 TMGVKPT-VVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML 630

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++   ++  M E   +P   +Y +LI    +L  ++ A       +  G  P
Sbjct: 631 EEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP 682



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 184/392 (46%), Gaps = 26/392 (6%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+  +N L+     +N+ E+A +  S  +  GL P+ WT+S+ I   C +    EA  + 
Sbjct: 438 SLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF 497

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D +   G   N   +T L++  CK G++  A  +L++M    C PN  TYN L++GLC  
Sbjct: 498 DSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKE 557

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            +++EA  ++  +   G+KP V TYT ++    K G  + A+++ N  +  G  P+V T+
Sbjct: 558 KKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
               + Y  +G   +   ++  M +   LPD ++Y+ L++G  + G    A    K MV 
Sbjct: 618 TAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVD 677

Query: 324 FGFEVDERMMNSLLRGLCMKS-------------------------WEEKDLLEDAYQVF 358
            G +    +++ L++ L  ++                         W+  +  E A ++F
Sbjct: 678 TGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEY-EIALKLF 736

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           EKM +     D   YG +I    + ++ +EA   +HH  E G  P    +N+++   C  
Sbjct: 737 EKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKL 796

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           G   +A+ L+  M E+  +P   SY +L+  L
Sbjct: 797 GVYAEAVRLVDAMVENGLLPLLESYKLLVCGL 828



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 166/369 (44%), Gaps = 53/369 (14%)

Query: 117 APNSWTFSIMIRCY----CNKNDFF---EARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           A   + F   +RCY     + + F    E + V   + +N   PN+ TF  +VN  CK G
Sbjct: 149 ADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIG 208

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
            + EA     ++ + G  P+  TY  L+ G C    V+ AYE+ + +   G + +  +YT
Sbjct: 209 NVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYT 268

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++ G C+ GR NEA++L  +  E    P V T+  L       G  ++ + L   MK++
Sbjct: 269 NLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEK 328

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
            C P+  +Y+ L++GL K  K+  A  +  EM   G        N+L+ G C     ++ 
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC-----KEG 383

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
           +++DA+++ + M       +  + G                            P T T+N
Sbjct: 384 MIDDAFEILDLM-------ESNSCG----------------------------PNTRTYN 408

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYGAA 466
            +I  LC + K+ KA+ LL  M E    PS  +Y+ LI    K++ LE +Y   +L    
Sbjct: 409 ELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN-- 466

Query: 467 LKQGVIPQR 475
            + G++P +
Sbjct: 467 -ENGLVPDQ 474



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 153/358 (42%), Gaps = 34/358 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE   +   +   G   +V  +  L+  ++     + A+K F+   S G  P+  
Sbjct: 556 KEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC 615

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++  +  Y ++    E   VI  M + G  P++ T+T+L++   + G    A + L  M
Sbjct: 616 TYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEE-----------------------------AYEM 212
              GCKP++   + L+K L +  R++E                             A ++
Sbjct: 676 VDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKL 735

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G   DV  Y A++ GFC+  R  EA  L++   ERG++P+   +N+L +  CK
Sbjct: 736 FEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCK 795

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   + V L+  M +   LP   SY  L+ GL   G    A ++F  ++  G+  DE  
Sbjct: 796 LGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVA 855

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              L+ GL      ++DL+++  ++ + M +K +          +  L     T  AL
Sbjct: 856 WKVLIDGLL-----KRDLVDECSELIDIMEEKDATAQADIACAALMRLAAANSTKGAL 908


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 201/414 (48%), Gaps = 6/414 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY-GLAPN 119
           I+   L   + I + + + G +WS    N ++         E A+ F  E S+  G  P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            +TF+ ++   C       A +++D M   GY P+V T+  +++ LCK G +KEA+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           QM    C PN  TYN L+  LC   +VEEA E+   + + G+ PDV T+ +++ G C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
               AMEL  E   +G  P+  T+N L +  C +G   + + +LK M+   C    I+Y+
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL++G  K  K R A  IF EM   G   +    N+L+ GLC     +   +EDA Q+ +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC-----KSRRVEDAAQLMD 529

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M  +    D  TY  ++    +G    +A   +      G  P  +T+  +I  LC  G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +++ A  LL  +       +  +Y+ +I  L +  K+ +A  L+   L+Q   P
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 196/371 (52%), Gaps = 8/371 (2%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    VS FN L+ AL   ++   A+    +  SYGL P+  TF+ +++ Y  + D   A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG-RIGCKPNIQTYNCLLK 198
            ++ + M + G   +  +  ++V+  CK GR+++AL  + +M  + G  P+  T+N L+ 
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC  G V+ A E++  +  +G  PDVYTY +V+ G CK+G   EA+E+L++ I R  +P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           N VT+NTL +  CKE    +   L +++  +  LPD  ++++L+ GL      R A+ +F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           +EM   G E DE   N L+  LC K       L++A  + ++M          TY  +I 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGK-----LDEALNMLKQMELSGCARSVITYNTLID 478

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPR-TITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
              K  KT EA   +   +E+  + R ++T+N +I  LC   +++ A  L+  M    + 
Sbjct: 479 GFCKANKTREAE-EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537

Query: 438 PSRTSYDMLIT 448
           P + +Y+ L+T
Sbjct: 538 PDKYTYNSLLT 548



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 194/391 (49%), Gaps = 7/391 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +K  I+I D + ++G +  V  +N ++  L  L E + AV+   +  +   +PN+ 
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C +N   EA ++   +   G  P+V TF  L+  LC +   + A+E+ ++M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC+P+  TYN L+  LC  G+++EA  ML  ++  G    V TY  ++DGFCK  ++
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA E+ +E    GV+ N VT+NTL +G CK         L+  M      PDK +Y++L
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L    + G I+ A  I + M   G E D     +L+ GLC     +   +E A ++   +
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC-----KAGRVEVASKLLRSI 601

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALC-GEG 419
             K     P  Y  VI+ L + +KT EA+      +E     P  +++  V + LC G G
Sbjct: 602 QMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGG 661

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            I +A+  L  + E   +P  +S  ML   L
Sbjct: 662 PIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 191/389 (49%), Gaps = 6/389 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N +L  LV  N  +      ++ S +G+ P+  TF+++I+  C  +    A  +++ M 
Sbjct: 157 YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMP 216

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+  TFT ++    + G L  AL + +QM   GC  +  + N ++ G C  GRVE
Sbjct: 217 SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276

Query: 208 EAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +A   +  + N DG  PD YT+  +++G CK G    A+E+++  ++ G  P+V T+N++
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G CK G   + V +L  M  R+C P+ ++Y+TL++ L K  ++  A  + + +   G 
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             D    NSL++GLC+           A ++FE+M  K    D  TY ++I +L    K 
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRV-----AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           DEAL  L      G     IT+N +I   C   K  +A  +   M  H    +  +Y+ L
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQR 475
           I  L +  +  DA  L    + +G  P +
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 165/331 (49%), Gaps = 7/331 (2%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           TF I+I  Y       E   V+D M D  G  P+   +  ++N L     LK       +
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAK 179

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G KP++ T+N L+K LC   ++  A  ML ++ + GL PD  T+T VM G+ + G 
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC-LPDKISYS 299
            + A+ +  + +E G + + V+ N + +G+CKEG     +  ++ M  ++   PD+ +++
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL+NGL K G ++ A+ I   M++ G++ D    NS++ GLC K  E K    +A +V +
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC-KLGEVK----EAVEVLD 354

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M  +    +  TY  +I TL K  + +EA          G +P   TFN++IQ LC   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
               A+ L   M      P   +Y+MLI  L
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 195/390 (50%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+  F +L  ALV +   +T V    +    G++ +  + +I+I C+C          V+
Sbjct: 90  SIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVL 149

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   G  PNV TF+ L+N  C  G++  A+E+ D M   G KPN+ +Y+ ++KGLC V
Sbjct: 150 GKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRV 209

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G+  E  ++L ++K  G +PDV  Y  ++D  CK    NEA+ +  +    G+ P VVT+
Sbjct: 210 GKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTY 269

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
            +L +G    G   +  GLL  MK  N +PD +++S L++ + K G++  A  I K M  
Sbjct: 270 TSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTE 329

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E D    N+L+ G C++       + +A +VFE M  K  + D  ++ I++    K 
Sbjct: 330 MGVEPDVATYNTLMNGYCLRME-----VVEARKVFEVMISKGRMPDVFSFSILVNGYCKA 384

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           K+ DEA          G IP T+++N +I  LC   +  +A  L   M+ +   P+  +Y
Sbjct: 385 KRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTY 444

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +L+  L +      A  L+ A    G+ P
Sbjct: 445 SILLDCLSKQGYLDQAMGLFRAMENSGLKP 474



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 202/420 (48%), Gaps = 5/420 (1%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
            + F   ++    K  + +   ++  G +  V     L+     L   +       +   
Sbjct: 95  GELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIK 154

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
            GL PN  TFS +I  +C +     A ++ D M   GY PNV +++I++  LC+ G+  E
Sbjct: 155 LGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTE 214

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
            +++L+ M  +GC+P++  YN ++  LC    V EA  +   +K  G+ P V TYT+++ 
Sbjct: 215 VIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIH 274

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G   +GR  EA  LLNE     + P++V F+ L +  CKEG   +   +LK M +    P
Sbjct: 275 GLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEP 334

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D  +Y+TL+NG     ++  A  +F+ M+  G   D    + L+ G C     +   +++
Sbjct: 335 DVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYC-----KAKRIDE 389

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A Q+F++MT +  + D  +Y  +I  L + ++  EA          G+ P  +T++ ++ 
Sbjct: 390 AKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLD 449

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L  +G +D+A+ L   M      P   +Y+++I  + +  K  DA  L+     +G+ P
Sbjct: 450 CLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQP 509



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 159/316 (50%), Gaps = 6/316 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     VDR+ K   + E + IF  +K  G   +V  +  L+  L  L   + A   
Sbjct: 229 PDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGL 288

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            +E     + P+   FS++I   C + +  EAR ++  M + G  P+V T+  L+N  C 
Sbjct: 289 LNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCL 348

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              + EA +V + M   G  P++ +++ L+ G C   R++EA ++   + + GL PD  +
Sbjct: 349 RMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVS 408

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++ G C+  R  EA EL  +    G  PN+VT++ L +   K+G   + +GL + M+
Sbjct: 409 YNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAME 468

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
                PD ++Y+ +++G+ K+GK + A  +F E+   G + +  +    + G+C     +
Sbjct: 469 NSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVC-----K 523

Query: 348 KDLLEDAYQVFEKMTK 363
             LL++A++ F +M K
Sbjct: 524 GGLLDEAHKAFRQMEK 539



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 164/347 (47%), Gaps = 10/347 (2%)

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           R + N ND   A    + M +    P++  F  L ++L +    K  + +  QM   G  
Sbjct: 67  RTFRNINDALSA---FNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGIS 123

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            ++ +   L+   C +  V+  + +L  +   GL+P+V T++ +++GFC  G+   A+EL
Sbjct: 124 HDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIEL 183

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +  + RG  PNV +++ +  G C+ G   + + LL+ MK   C PD + Y+T+++ L K
Sbjct: 184 FDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCK 243

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL-CMKSWEEKDLLEDAYQVFEKMTKKVS 366
              +  AV IF +M   G         SL+ GL  +  W+E      A+ +  +M     
Sbjct: 244 DRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKE------AFGLLNEMKGGNI 297

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           + D   + ++I  + K  +  EA + L    EMG  P   T+N ++   C   ++ +A  
Sbjct: 298 MPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARK 357

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +  +M    ++P   S+ +L+    + ++  +A  L+     +G+IP
Sbjct: 358 VFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIP 404



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 115/232 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   I  ++ + G    V+ +N L+    +  E   A K F    S G  P+ +
Sbjct: 313 KEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVF 372

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +FSI++  YC      EA+++ D M   G  P+  ++  L++ LC++ R  EA E+   M
Sbjct: 373 SFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDM 432

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN+ TY+ LL  L   G +++A  +   ++N GLKPD+ TY  ++DG CK G+ 
Sbjct: 433 HSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKF 492

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
            +A EL  E   +G+ PN        +G CK G   +     + M+K +C P
Sbjct: 493 KDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 209/438 (47%), Gaps = 77/438 (17%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ DF  LL ++  +    T +   ++  S+G+ PN +T +I+I  +C+ N    A  V+
Sbjct: 64  SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVL 123

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   G+ P+ TTFT L+  LC  G++ EAL + D+M   G +PN+ TY  L+ GLC V
Sbjct: 124 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 183

Query: 204 G-----------------------------------RVEEAYEMLMNVKNDGLKPDVYTY 228
           G                                   +V EA+ +   +   G+ PD++TY
Sbjct: 184 GNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTY 243

Query: 229 TA-----------------------------------VMDGFCKVGRSNEAMELLNEAIE 253
           T+                                   V+D  CK G+  EA E+++  I+
Sbjct: 244 TSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ 303

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RGV P+VVT+ TL +G+C +    + V +  +M ++   PD ISY+TL+NG  K  KI  
Sbjct: 304 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDK 363

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A+ +F+EM R  +  D +  N+L+ GLC         L+DA  +F +M  +  + D  TY
Sbjct: 364 AMYLFEEMCRKEWIPDTKTYNTLMYGLC-----HVGRLQDAIALFHEMVARGQMPDLVTY 418

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMY 432
            I++ +L K +  +EA+  L  AIE  ++ P    +N +I  +C  G+++ A  L   + 
Sbjct: 419 SILLDSLCKNRHLEEAMA-LLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLS 477

Query: 433 EHAKIPSRTSYDMLITKL 450
                PS  +Y+++I  L
Sbjct: 478 SKGLHPSVWTYNIMIHGL 495



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 155/325 (47%), Gaps = 7/325 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  F  L+ S+ K       L +  QM   G  PN+ T N L+   C++ RV  A+ +
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +PD  T+T ++ G C  G+  EA+ L ++ I+ G  PNVVT+ TL NG CK
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     + LL+ M++ NC PD + Y+++++ L K  ++  A ++F +MV  G   D   
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 333 MNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             SL+  LC +  W+    L        +M     + D   +  V+  L K  K  EA  
Sbjct: 243 YTSLVHALCNLCEWKHVTTL------LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHE 296

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            +   I+ G  P  +T+  ++   C + ++D+A+ +  +M      P   SY  LI    
Sbjct: 297 IVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYC 356

Query: 452 QLEKSYDACALYGAALKQGVIPQRK 476
           ++ K   A  L+    ++  IP  K
Sbjct: 357 KIHKIDKAMYLFEEMCRKEWIPDTK 381



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 162/339 (47%), Gaps = 5/339 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  ++F  +   G +  +  +  L+ AL  L E +      ++  +  + P+  
Sbjct: 217 KDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVV 276

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            FS ++   C +    EA +++D M   G  P+V T+T L++  C    + EA++V D M
Sbjct: 277 IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 336

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  P++ +Y  L+ G C + ++++A  +   +      PD  TY  +M G C VGR 
Sbjct: 337 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRL 396

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L +E + RG  P++VT++ L +  CK     + + LLK ++  N  PD   Y+ +
Sbjct: 397 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNII 456

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G+ + G++  A  +F  +   G        N ++ GLC     ++ LL +A ++F +M
Sbjct: 457 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLC-----KRGLLNEANKLFMEM 511

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
                  D  TY  + R   +  +T  A+  L   +  G
Sbjct: 512 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 550



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 133/268 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  +I D + + G    V  +  L+    + +E + AVK F      G AP+  
Sbjct: 287 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 346

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +I  YC  +   +A  + + M    + P+  T+  L+  LC  GRL++A+ +  +M
Sbjct: 347 SYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEM 406

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ TY+ LL  LC    +EEA  +L  ++   L PD+  Y  ++DG C+ G  
Sbjct: 407 VARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGEL 466

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A +L +    +G+ P+V T+N + +G CK G   +   L   M   +C PD  +Y+T+
Sbjct: 467 EAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTI 526

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
             G L+  +   A+ + +EM+  GF  D
Sbjct: 527 ARGFLQNNETLRAIQLLEEMLARGFSAD 554


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 199/431 (46%), Gaps = 40/431 (9%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN----------- 132
           S+ DF  LL A   L   ET + F  +   YG++ + ++F+I+I C+C            
Sbjct: 70  SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVL 129

Query: 133 ------------------------KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS 168
                                    N   +A  ++  M  +GY PNV  +  L++ LCK+
Sbjct: 130 GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKN 189

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G L  ALE+L++M + G   ++ TYN LL GLCY GR  +A  ML ++    + PDV T+
Sbjct: 190 GELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTF 249

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           TA++D F K G  +EA EL  E I+  V PN VT+N++ NG C  G          LM  
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           + C P+ ++Y+TL++G  K+  +   + +F+ M   GF  D    N+L+ G C     + 
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC-----QV 364

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             L  A  +F  M  +    D  T+ I++  L    + + AL+      E       + +
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           N +I  LC   K++KA  L   +      P   +Y ++I  L +     +A  L     +
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484

Query: 469 QGVIPQRKPQD 479
           +G+I Q   +D
Sbjct: 485 EGIICQMNAED 495



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 202/390 (51%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ DF  +L  +  +N+ +  +  + +  + G++ + ++F+I+I C+C  +    A  ++
Sbjct: 603 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 662

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G+ P++ T   L+N  C+  R +EA+ ++D M   G  PN+  YN ++ GLC  
Sbjct: 663 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 722

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
             +  A E+   ++  G++ D  TY  ++ G    GR  +A  LL + ++R + PNV+ F
Sbjct: 723 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 782

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             L + + KEG  ++   L K M +R+ +P+  +Y++L+NG    G +  A  +F  MV 
Sbjct: 783 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 842

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D    N+L+ G C     +   +ED  ++F +MT +  V D  TY  +I    + 
Sbjct: 843 KGCFPDVVTYNTLITGFC-----KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 897

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            K + A    +  ++ G  P  +T+N ++  LC  GKI+KAL+++  + +        +Y
Sbjct: 898 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 957

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +++I  L + +K  +A  L+ +  ++GV P
Sbjct: 958 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 987



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 150/306 (49%), Gaps = 6/306 (1%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K   L   +++F  ++K G       +N L+  L        A +   +     + PN  
Sbjct: 721  KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 780

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
             F+ +I  +  + +  EAR +   M      PNV T+  L+N  C  G L +A  + D M
Sbjct: 781  FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 840

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               GC P++ TYN L+ G C   RVE+  ++   +   GL  D +TY  ++ G+C+ G+ 
Sbjct: 841  VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 900

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            N A ++ N  ++ GV+P++VT+N L +  C  G   K + +++ ++K     D I+Y+ +
Sbjct: 901  NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 960

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE-EKDLL-----EDAY 355
            + GL +  K++ A  +F+ + R G + D     +++ GLC K  + E D L     ED +
Sbjct: 961  IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 1020

Query: 356  QVFEKM 361
               E++
Sbjct: 1021 MPSERI 1026



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 5/312 (1%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G   +V  +N L+  L    E   A++  +E    GL  +  T++ ++   C    + 
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +A +++  M     +P+V TFT L++   K G L EA E+  +M +    PN  TYN ++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            GLC  GR+ +A +    + + G  P+V TY  ++ GFCK    +E M+L       G  
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            ++ T+NTL +GYC+ G     + +   M  R   PD I++  LL+GL   G+I  A+  
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F +M      +     N ++ GLC     + D +E A+++F ++  +    D  TY I+I
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLC-----KADKVEKAWELFCRLPVEGVKPDARTYTIMI 463

Query: 378 RTLGKGKKTDEA 389
             L K     EA
Sbjct: 464 LGLCKNGPRREA 475



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 135/280 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   +++ + ++K G    V  +N LL  L        A +   +     + P+  
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +  + +  EA+++   M  +   PN  T+  ++N LC  GRL +A +  D M
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PN+ TYN L+ G C    V+E  ++   +  +G   D++TY  ++ G+C+VG+ 
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+++    + R VTP+++T   L +G C  G     +     M++       ++Y+ +
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           ++GL K  K+  A  +F  +   G + D R    ++ GLC
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 120/235 (51%)

Query: 104  AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
            A   + E     + PN +T++ +I  +C      +A+ + D M   G  P+V T+  L+ 
Sbjct: 798  ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 857

Query: 164  SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
              CKS R+++ +++  +M   G   +  TYN L+ G C  G++  A ++   + + G+ P
Sbjct: 858  GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 917

Query: 224  DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            D+ TY  ++D  C  G+  +A+ ++ +  +  +  +++T+N +  G C+     +   L 
Sbjct: 918  DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 977

Query: 284  KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            + + ++   PD I+Y T+++GL + G  R A  + + M   GF   ER+ +  LR
Sbjct: 978  RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 1032



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 7/282 (2%)

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           S R ++A  +  +M      P+I  +  LL     + R E        ++  G+  D+Y+
Sbjct: 49  SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYS 108

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           +T ++  FC+  R + A+ +L + ++ G  P++VTF +L +G+C          L+ LM 
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WE 346
           K    P+ + Y+TL++GL K G++  A+ +  EM + G   D    N+LL GLC    W 
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW- 227

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
                 DA ++   M K+    D  T+  +I    K    DEA       I+    P  +
Sbjct: 228 -----SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           T+N++I  LC  G++  A     LM      P+  +Y+ LI+
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 142/333 (42%), Gaps = 40/333 (12%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  FT L+ +     R +  +    +M   G   ++ ++  L+   C   R+  A  +
Sbjct: 69  PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +P + T+ +++ GFC V R  +A  L+   ++ G  PNVV +NTL +G CK
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188

Query: 273 EG-----------TPMKGVG------------------------LLKLMKKRNCLPDKIS 297
            G              KG+G                        +L+ M KR+  PD ++
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           ++ L++  +K G +  A  ++KEM++   + +    NS++ GLCM        L DA + 
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR-----LYDAKKT 303

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           F+ M  K    +  TY  +I    K +  DE +         G      T+N +I   C 
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            GK+  AL +   M      P   ++ +L+  L
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 114/242 (47%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            +K   L E  +++  + +     +V  +N L+    +      A   F    S G  P+ 
Sbjct: 790  VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 849

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             T++ +I  +C      +  K+   M   G   +  T+  L++  C++G+L  A +V ++
Sbjct: 850  VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 909

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            M   G  P+I TYN LL  LC  G++E+A  M+ +++   +  D+ TY  ++ G C+  +
Sbjct: 910  MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 969

Query: 241  SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              EA  L      +GV P+ + + T+ +G C++G   +   L + MK+   +P +  Y  
Sbjct: 970  LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 1029

Query: 301  LL 302
             L
Sbjct: 1030 TL 1031



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)

Query: 48  NPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP  +     +D  +K   L E  +++  + +   + +   +N ++  L M      A K
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F   +S G  PN  T++ +I  +C      E  K+   M   G++ ++ T+  L++  C
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           + G+L+ AL++   M      P+I T+  LL GLC  G +E A     +++       + 
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            Y  ++ G CK  +  +A EL       GV P+  T+  +  G CK G   +   L++ M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482

Query: 287 KK 288
           K+
Sbjct: 483 KE 484



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 122/278 (43%), Gaps = 5/278 (1%)

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L  G  +  R E+A+ +   + +    P +  +T ++     + R    +    +    G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           ++ ++ +F  L + +C+       + +L  M K    P  +++ +LL+G     +I  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
           S+   MV+ G+E +  + N+L+ GLC K+ E    L  A ++  +M KK    D  TY  
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLC-KNGE----LNIALELLNEMEKKGLGADVVTYNT 216

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           ++  L    +  +A   L   ++    P  +TF  +I     +G +D+A  L   M + +
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             P+  +Y+ +I  L    + YDA   +     +G  P
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 7/270 (2%)

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           + ++A+ +   +      P +  +T V+    K+ + +  + L ++    G++ ++ +F 
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L + +C+       + LL  M K    P  ++  +LLNG  +  + + AVS+   M  F
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG-KG 383
           GF  +  + N+++ GLC    + +D L +A +VF  M KK    D  TY  +I  L   G
Sbjct: 704 GFVPNVVIYNTVINGLC----KNRD-LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 758

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           + TD A + L   ++    P  I F  +I     EG + +A  L   M   + +P+  +Y
Sbjct: 759 RWTDAARL-LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 817

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + LI          DA  ++   + +G  P
Sbjct: 818 NSLINGFCIHGCLGDAKYMFDLMVSKGCFP 847



 Score = 38.1 bits (87), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 28/137 (20%), Positives = 61/137 (44%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            +A  L     +F+ +   G +  +  +N LL  L    + E A+    +     +  +  
Sbjct: 896  QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 955

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T++I+I+  C  +   EA  +   +   G  P+   +  +++ LC+ G  +EA ++  +M
Sbjct: 956  TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 1015

Query: 182  GRIGCKPNIQTYNCLLK 198
               G  P+ + Y+  L+
Sbjct: 1016 KEDGFMPSERIYDETLR 1032


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 200/410 (48%), Gaps = 6/410 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY-GLAPN 119
           I+   L   + I + + + G +WS    N ++         E A+ F  E S+  G  P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            +TF+ ++   C       A +++D M   GY P+V T+  +++ LCK G +KEA+E LD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLD 354

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           QM    C PN  TYN L+  LC   +VEEA E+   + + G+ PDV T+ +++ G C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
               AMEL  E   +G  P+  T+N L +  C +G   + + +LK M+   C    I+Y+
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL++G  K  KIR A  IF EM   G   +    N+L+ GLC     +   +EDA Q+ +
Sbjct: 475 TLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLC-----KSRRVEDASQLMD 529

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M  +    D  TY  ++    +G    +A   +      G  P  +T+  +I  LC  G
Sbjct: 530 QMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           +++ A  LL  +       +  +Y+ +I  L +  K+ +A  L+   L+Q
Sbjct: 590 RVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 194/391 (49%), Gaps = 7/391 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +K  I+I D + ++G +  V  +N ++  L  L E + AV+F  +  +   +PN+ 
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTV 366

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C +N   EA ++   +   G  P+V TF  L+  LC +   + A+E+ ++M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC+P+  TYN L+  LC  G+++EA  ML  ++  G    V TY  ++DGFCK  + 
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKI 486

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA E+ +E    GV+ N VT+NTL +G CK         L+  M      PDK +Y++L
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSL 546

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L    + G I+ A  I + M   G E D     +L+ GLC     +   +E A ++   +
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC-----KAGRVEVASKLLRSI 601

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH-IPRTITFNNVIQALC-GEG 419
             K     P  Y  VI+ L + +KT EA+      +E     P  +++  V + LC G G
Sbjct: 602 QMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGG 661

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            I +A+  L  + E   +P  +S  ML   L
Sbjct: 662 PIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 194/371 (52%), Gaps = 8/371 (2%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    VS FN L+ AL   ++   A+    +  SYGL P+  TF+ +++ Y  + D   A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG-RIGCKPNIQTYNCLLK 198
            ++ + M + G   +  +  ++V+  CK GR+++AL  + +M  + G  P+  T+N L+ 
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC  G V+ A E++  +  +G  PDVYTY +V+ G CK+G   EA+E L++ I R  +P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSP 363

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           N VT+NTL +  CKE    +   L +++  +  LPD  ++++L+ GL      R A+ +F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           +EM   G E DE   N L+  LC K       L++A  + ++M          TY  +I 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGK-----LDEALNMLKQMELSGCARSVITYNTLID 478

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPR-TITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
              K  K  EA   +   +E+  + R ++T+N +I  LC   +++ A  L+  M    + 
Sbjct: 479 GFCKANKIREAE-EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK 537

Query: 438 PSRTSYDMLIT 448
           P + +Y+ L+T
Sbjct: 538 PDKFTYNSLLT 548



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 195/404 (48%), Gaps = 15/404 (3%)

Query: 82  NWSVSDF---------NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           +W + DF         N +L  LV  N  +      ++ S +G+ P+  TF+++I+  C 
Sbjct: 142 HWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCR 201

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
            +    A  +++ M   G  P+  TFT ++    + G L  AL + +QM   GC  +  +
Sbjct: 202 AHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVS 261

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            N ++ G C  GRVE+A   +  + N DG  PD YT+  +++G CK G    A+E+++  
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           ++ G  P+V T+N++ +G CK G   + V  L  M  R+C P+ ++Y+TL++ L K  ++
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQV 381

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  + + +   G   D    NSL++GLC+           A ++FE+M  K    D  
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV-----AMELFEEMRSKGCEPDEF 436

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY ++I +L    K DEAL  L      G     IT+N +I   C   KI +A  +   M
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEM 496

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
             H    +  +Y+ LI  L +  +  DA  L    + +G  P +
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDK 540



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 168/347 (48%), Gaps = 7/347 (2%)

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVTTFTILVNS 164
           K   +  + G    +  F I+I  Y       E   V+  M D+ G  P+   +  ++N 
Sbjct: 104 KILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNL 163

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           L     LK       +M   G KP++ T+N L+K LC   ++  A  ML ++ + GL PD
Sbjct: 164 LVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
             T+T +M G+ + G  + A+ +  + +E G + + V+ N + +G+CKEG     +  ++
Sbjct: 224 EKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283

Query: 285 LMKKRNC-LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            M  ++   PD+ +++TL+NGL K G ++ A+ I   M++ G++ D    NS++ GLC K
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC-K 342

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
             E K    +A +  ++M  +    +  TY  +I TL K  + +EA          G +P
Sbjct: 343 LGEVK----EAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              TFN++IQ LC       A+ L   M      P   +Y+MLI  L
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 156/333 (46%), Gaps = 23/333 (6%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + P    +  ++  L +SG   +  ++L+ M   GC+     +  L++        +E  
Sbjct: 79  FSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEIL 138

Query: 211 EMLMNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-GVTPNVVTFNTLFN 268
            ++  + +D GLKPD + Y  +++     G + + +E+ +  +   G+ P+V TFN L  
Sbjct: 139 GVVHWMIDDFGLKPDTHFYNRMLNLLVD-GNNLKLVEIAHAKMSVWGIKPDVSTFNVLIK 197

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
             C+       + +L+ M     +PD+ +++T++ G ++ G +  A+ I ++MV FG   
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSW 257

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS-VTDPGTYGIVIRTLGKGKKTD 387
               +N ++ G C     ++  +EDA    ++M+ +     D  T+  ++  L K     
Sbjct: 258 SNVSVNVIVHGFC-----KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG--- 309

Query: 388 EALIHLHHAIEM-------GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
               H+ HAIE+       G+ P   T+N+VI  LC  G++ +A+  L  M      P+ 
Sbjct: 310 ----HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNT 365

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +Y+ LI+ L +  +  +A  L      +G++P
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILP 398


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 199/390 (51%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           ++  FN ++     +     A  + S+    GL P+++T++ +I  +C       A +V 
Sbjct: 193 NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVF 252

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G   N  ++T L++ LC++GR+ EAL++   M    C P ++TY  L+  L   
Sbjct: 253 LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGS 312

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           GR  EA  +   +K  G +P+V+TYT ++DG CK  + +EA ++L+E  E+G+ P+VVT+
Sbjct: 313 GRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTY 372

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N L +GYCKEG       +L LM+  +C P+  +Y+ L+ GL K  K+  A+++  +M+ 
Sbjct: 373 NALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE 432

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                     NSL+ G C     + + LE AY++   M +   V D  TY + I TL K 
Sbjct: 433 RKLSPSLITYNSLIHGQC-----KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + +EA          G     + +  +I   C  GKID A  LL  M   A +P+  +Y
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++LI  L + +K  +A +L    L  GV P
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 192/373 (51%), Gaps = 5/373 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  + + G   +   + +L+  L        A+K F++ +     P   T++++I   
Sbjct: 250 EVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYAL 309

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
                  EA  + + M + G  PNV T+T+L++ LCK  ++ EA ++L +M   G  P++
Sbjct: 310 SGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L+ G C  G +++A+E+L  ++++   P+  TY  ++ G CK  + ++AM LLN+
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +ER ++P+++T+N+L +G CK         LL LM +   +PD+ +YS  ++ L K G+
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A ++F  +   G + +E +  +L+ G C     +   ++ AY + E+M     + + 
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYC-----KVGKIDVAYSLLERMLNDACLPNS 544

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY ++I  L K KK  EA   +   + MG  P  +T+  +I  +  +G  D AL +   
Sbjct: 545 YTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNH 604

Query: 431 MYEHAKIPSRTSY 443
           M      P   +Y
Sbjct: 605 MVSLGYQPDVCTY 617



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 199/413 (48%), Gaps = 5/413 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E + +F  + +D    +V  +  L+ AL     +  A+  F+E    G  PN  
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I   C +N   EARK++  M + G  P+V T+  L++  CK G + +A E+LD M
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C PN +TYN L+ GLC   +V +A  +L  +    L P + TY +++ G CKV   
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A  LL+   E G+ P+  T++   +  CKEG   +   L   +K +    +++ Y+ L
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K GKI  A S+ + M+      +    N L+ GLC    +EK + E +  V + +
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLC----KEKKMKEASSLVAKML 571

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           T  V  T   TY I+I  + K    D AL   +H + +G+ P   T+   + A   +G +
Sbjct: 572 TMGVKPT-VVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML 630

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           ++   ++  M E   +P   +Y +LI    +L  ++ A       +  G  P 
Sbjct: 631 EEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 166/369 (44%), Gaps = 53/369 (14%)

Query: 117 APNSWTFSIMIRCY----CNKNDFF---EARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           A   + F   +RCY     + + F    E + V   + +N   PN+ TF  +VN  CK G
Sbjct: 149 ADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIG 208

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
            + EA     ++ + G  P+  TY  L+ G C    V+ AYE+ + +   G + +  +YT
Sbjct: 209 NVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYT 268

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++ G C+ GR NEA++L  +  E    P V T+  L       G  ++ + L   MK++
Sbjct: 269 NLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEK 328

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
            C P+  +Y+ L++GL K  K+  A  +  EM   G        N+L+ G C     ++ 
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC-----KEG 383

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
           +++DA+++ + M       +  + G                            P T T+N
Sbjct: 384 MIDDAFEILDLM-------ESNSCG----------------------------PNTRTYN 408

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYGAA 466
            +I  LC + K+ KA+ LL  M E    PS  +Y+ LI    K++ LE +Y   +L    
Sbjct: 409 ELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN-- 466

Query: 467 LKQGVIPQR 475
            + G++P +
Sbjct: 467 -ENGLVPDQ 474



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/424 (21%), Positives = 181/424 (42%), Gaps = 26/424 (6%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P       F+D + K   ++E   +FDS+K  G   +   +  L+     + + + A   
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
                +    PNS+T++++I   C +    EA  ++  M   G  P V T+TIL+  + K
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G    AL+V + M  +G +P++ TY   L      G +EE  +++  +  +G+ PD+ T
Sbjct: 592 DGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK--------- 278
           YT ++DG+ ++G ++ A + L   ++ G  P++   + L      E   MK         
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENR-MKETRSEIGID 710

Query: 279 ----------GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
                      + L + M +  C  D   Y  L+ G  +  ++  A  +   M   G   
Sbjct: 711 SVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 770

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
            E + NSLL   C     +  +  +A ++ + M +   +    +Y +++  L      ++
Sbjct: 771 SEDIYNSLLDCCC-----KLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEK 825

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A    H  +  G+    + +  +I  L     +D+   L+ +M E    P+  +Y +LI 
Sbjct: 826 AKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIE 885

Query: 449 KLDQ 452
            L++
Sbjct: 886 GLER 889


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 179/346 (51%), Gaps = 5/346 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G +  V  +N +L  L M            E    G  PN  TF+ +I   C    F   
Sbjct: 220 GCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERV 279

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            +V+  M D+G  P++  +  +++ +CK G L+ A E+LD+M   G KPN+  YN +LKG
Sbjct: 280 HQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKG 339

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC   R E+A E+L  + ++    D  T+  ++D FC+ G     +ELL + +E G  P+
Sbjct: 340 LCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPD 399

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           V+T+ T+ NG+CKEG   + V LLK M    C P+ ISY+ +L GL    +   A  +  
Sbjct: 400 VITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMS 459

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           +M+  G   +    N+++  LC     +K L+E A ++ ++M       D  +Y  VI  
Sbjct: 460 QMIEQGCSPNPVTFNTVINFLC-----KKGLVEQAIELLKQMLLNGCSPDLISYSTVIDG 514

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           LGK  KTDEAL  L+  +  G  P TI ++++  AL  EG+I++ +
Sbjct: 515 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVI 560



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 173/323 (53%), Gaps = 5/323 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A +      SYGL PN   ++ +++  C+   + +A +++  MFDN    +  TF IL
Sbjct: 312 EVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNIL 371

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           V+  C++G +   +E+L+QM   GC P++ TY  ++ G C  G ++EA  +L ++   G 
Sbjct: 372 VDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGC 431

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +P+  +YT V+ G C   R  +A +L+++ IE+G +PN VTFNT+ N  CK+G   + + 
Sbjct: 432 RPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIE 491

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           LLK M    C PD ISYST+++GL K GK   A+ +   MV  G   +  + +S+   L 
Sbjct: 492 LLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL- 550

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                ++  +    Q+F+ +      +D   Y  VI +L K   TD A+  L + +  G 
Sbjct: 551 ----SKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGC 606

Query: 402 IPRTITFNNVIQALCGEGKIDKA 424
           +P   T+  +I+ L  EG + +A
Sbjct: 607 MPNESTYTILIRGLASEGFVKEA 629



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 171/392 (43%), Gaps = 50/392 (12%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ M+  YC       AR++   +      PN  T+  +V +LC  GR+ +AL VLD+M 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 183 RIGCKPNIQTYNCLLKGLC---------------------------------------YV 203
           R GC P    Y+ +L+  C                                         
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 204 GRVEEAYEMLMNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           G V+EA  +L ++    G  PDV +Y AV+ G C   R     +L+ E +  G  PNVVT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           FNTL    C+ G   +   +L  M    C PD   Y+T+L+G+ K G +  A  I   M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 323 RFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
            +G + +    N++L+GLC  + WE+      A ++  +M       D  T+ I++    
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQ------AEELLAEMFDNDCPLDDVTFNILVDFFC 376

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           +       +  L   +E G +P  IT+  VI   C EG ID+A++LL  M      P+  
Sbjct: 377 QNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTI 436

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           SY +++  L   E+  DA  L    ++QG  P
Sbjct: 437 SYTIVLKGLCSAERWVDAEDLMSQMIEQGCSP 468



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 192/416 (46%), Gaps = 42/416 (10%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALV-MLNEQETAVKFFSE-ASSYGLA 117
           R      +  + +   +   G    V + N +L A+       + A++   +  +S+G  
Sbjct: 163 RGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCD 222

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+  +++ +++  C    +   + +++ M   G  PNV TF  L+  LC++G  +   +V
Sbjct: 223 PDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQV 282

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L QM   GC P+I+ Y  +L G+C  G +E A+E+L  + + GLKP+V  Y  V+ G C 
Sbjct: 283 LAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCS 342

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R  +A ELL E  +     + VTFN L + +C+ G   + + LL+ M +  C+PD I+
Sbjct: 343 AERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVIT 402

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+T++N                                   G C     ++ L+++A  +
Sbjct: 403 YTTVIN-----------------------------------GFC-----KEGLIDEAVML 422

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            + M       +  +Y IV++ L   ++  +A   +   IE G  P  +TFN VI  LC 
Sbjct: 423 LKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCK 482

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +G +++A+ LL  M  +   P   SY  +I  L +  K+ +A  L    + +G+ P
Sbjct: 483 KGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSP 538



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 161/326 (49%), Gaps = 8/326 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I D +   G   +V  +N +L  L      E A +  +E        +  TF+I++  +
Sbjct: 316 EILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFF 375

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C     +   ++++ M ++G  P+V T+T ++N  CK G + EA+ +L  M   GC+PN 
Sbjct: 376 CQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNT 435

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  +LKGLC   R  +A +++  +   G  P+  T+  V++  CK G   +A+ELL +
Sbjct: 436 ISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQ 495

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G +P++++++T+ +G  K G   + + LL +M  +   P+ I YS++ + L K G+
Sbjct: 496 MLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGR 555

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I   + +F  +       D  + N+++  LC +   ++     A +    M     + + 
Sbjct: 556 INRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDR-----AIEFLAYMVSSGCMPNE 610

Query: 371 GTYGIVIRTL---GKGKKTDEALIHL 393
            TY I+IR L   G  K+  E L  L
Sbjct: 611 STYTILIRGLASEGFVKEAQEMLTEL 636



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 131/256 (51%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I++ + + + G    V  +  ++         + AV      ++ G  PN+ +++I+++ 
Sbjct: 385 IELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKG 444

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C+   + +A  ++  M + G  PN  TF  ++N LCK G +++A+E+L QM   GC P+
Sbjct: 445 LCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPD 504

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + +Y+ ++ GL   G+ +EA E+L  + N G+ P+   Y+++     K GR N  +++ +
Sbjct: 505 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFD 564

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
              +  +  + V +N + +  CK G   + +  L  M    C+P++ +Y+ L+ GL   G
Sbjct: 565 NIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEG 624

Query: 310 KIRPAVSIFKEMVRFG 325
            ++ A  +  E+   G
Sbjct: 625 FVKEAQEMLTELCSKG 640



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 76/159 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++ I++   +  +G +  +  ++ ++  L    + + A++  +   + G++PN+ 
Sbjct: 482 KKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 541

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +S +      +       ++ D + D     +   +  +++SLCK G    A+E L  M
Sbjct: 542 IYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYM 601

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
              GC PN  TY  L++GL   G V+EA EML  + + G
Sbjct: 602 VSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 212/461 (45%), Gaps = 38/461 (8%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+  Q  +  + K + + E + + + +   G       FND+++ L   +    A K 
Sbjct: 244 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 303

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCN-------KNDFFEARKVIDCMFDNGYH-------- 152
            +     G  P+  T+  ++   C        K+ F+   K    +F+   H        
Sbjct: 304 VNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRL 363

Query: 153 -----------------PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
                            P+V T+  L+    K G +  ALEVL  M   GCKPN+ +Y  
Sbjct: 364 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTI 423

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G C +G+++EAY +L  +  DGLKP+   +  ++  FCK  R  EA+E+  E   +G
Sbjct: 424 LVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 483

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             P+V TFN+L +G C+       + LL+ M     + + ++Y+TL+N  L+ G+I+ A 
Sbjct: 484 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 543

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +  EMV  G  +DE   NSL++GLC     +K     A  +FEKM +   V    +  I
Sbjct: 544 KLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDK-----ARSLFEKMLRDGLVPSSISCNI 598

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I  L +    +EA+      +  G  P  +TFN++I  LC  G+I+  L +   +    
Sbjct: 599 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 658

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
             P   +Y+ L++ L +    YDAC L    ++ G +P  +
Sbjct: 659 IPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDR 699



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 189/364 (51%), Gaps = 6/364 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           FN L+   V     + A    S+  +SYG+ P+  T++ +I  Y  K     A +V+  M
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            + G  PNV ++TILV+  CK G++ EA  +L++M   G KPN   +NCL+   C   R+
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            EA E+   +   G KPDVYT+ +++ G C+V     A+ LL + I  GV  N VT+NTL
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            N + + G   +   L+  M  +  L D+I+Y++L+ GL + G++  A S+F++M+R G 
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGL 589

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
                  N L+ GLC        ++E+A +  ++M  + S  D  T+  +I  L +  + 
Sbjct: 590 VPSSISCNILINGLC-----RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 644

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           ++ L         G  P T+T+N ++  LC  G +  A LLL    E   +P+  ++ +L
Sbjct: 645 EDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSIL 704

Query: 447 ITKL 450
           +  L
Sbjct: 705 LQSL 708



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 203/419 (48%), Gaps = 37/419 (8%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N +L  LV  N  + A   F +  S  + P  +TF ++++  C  N+   A  V+  M 
Sbjct: 179 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMT 238

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G  PN   +  L++SL K  R+ EAL++L++M  +GC P+ +T+N ++ GLC   R+ 
Sbjct: 239 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 298

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-------------------- 247
           EA +M+  +   G  PD  TY  +M+G CK+GR + A +L                    
Sbjct: 299 EAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFV 358

Query: 248 ----LNEA--------IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
               L++A           G+ P+V T+N+L  GY K+G     + +L+ M+ + C P+ 
Sbjct: 359 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNV 418

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
            SY+ L++G  K GKI  A ++  EM   G + +    N L+   C     ++  + +A 
Sbjct: 419 YSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFC-----KEHRIPEAV 473

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++F +M +K    D  T+  +I  L +  +   AL  L   I  G +  T+T+N +I A 
Sbjct: 474 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 533

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
              G+I +A  L+  M     +    +Y+ LI  L +  +   A +L+   L+ G++P 
Sbjct: 534 LRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPS 592



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 144/279 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  ++ + +  DG   +   FN L+ A    +    AV+ F E    G  P+ +
Sbjct: 430 KLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 489

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C  ++   A  ++  M   G   N  T+  L+N+  + G +KEA +++++M
Sbjct: 490 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 549

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +  TYN L+KGLC  G V++A  +   +  DGL P   +   +++G C+ G  
Sbjct: 550 VFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMV 609

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA+E   E + RG TP++VTFN+L NG C+ G    G+ + + ++     PD ++Y+TL
Sbjct: 610 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTL 669

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           ++ L K G +  A  +  E +  GF  ++R  + LL+ L
Sbjct: 670 MSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 169/360 (46%), Gaps = 10/360 (2%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           Y   P   ++++++    + N    A  V   M      P + TF +++ +LC    +  
Sbjct: 170 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDS 229

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           AL VL  M + GC PN   Y  L+  L    RV EA ++L  +   G  PD  T+  V+ 
Sbjct: 230 ALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 289

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G CK  R NEA +++N  + RG TP+ +T+  L NG CK G       L   + K    P
Sbjct: 290 GLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----P 345

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMV-RFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
             + ++TL++G +  G++  A ++  +MV  +G   D    NSL+ G     + +K L+ 
Sbjct: 346 TSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG-----YWKKGLVG 400

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A +V   M  K    +  +Y I++    K  K DEA   L+     G  P T+ FN +I
Sbjct: 401 LALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLI 460

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            A C E +I +A+ +   M      P   +++ LI+ L ++++   A  L    + +GV+
Sbjct: 461 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 520



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 162/342 (47%), Gaps = 40/342 (11%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D +   G    V  +N L+           A++   +  + G  PN ++++I++  +C  
Sbjct: 372 DMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKL 431

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
               EA  +++ M  +G  PN   F  L+++ CK  R+ EA+E+  +M R GCKP++ T+
Sbjct: 432 GKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 491

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI- 252
           N L+ GLC V  ++ A  +L ++ ++G+  +  TY  +++ F + G   EA +L+NE + 
Sbjct: 492 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 551

Query: 253 ----------------------------------ERGVTPNVVTFNTLFNGYCKEGTPMK 278
                                               G+ P+ ++ N L NG C+ G   +
Sbjct: 552 QGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEE 611

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            V   K M  R   PD +++++L+NGL + G+I   +++F+++   G   D    N+L+ 
Sbjct: 612 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMS 671

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
            LC     +   + DA  + ++  +   V +  T+ I++++L
Sbjct: 672 WLC-----KGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 35/249 (14%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E ++IF  + + G    V  FN L+  L  ++E + A+    +  S G+  N+ 
Sbjct: 465 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 524

Query: 122 TFSIMIRCYCNKNDFFEARKVID---------------------C--------------M 146
           T++ +I  +  + +  EARK+++                     C              M
Sbjct: 525 TYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM 584

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
             +G  P+  +  IL+N LC+SG ++EA+E   +M   G  P+I T+N L+ GLC  GR+
Sbjct: 585 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 644

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           E+   M   ++ +G+ PD  TY  +M   CK G   +A  LL+E IE G  PN  T++ L
Sbjct: 645 EDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSIL 704

Query: 267 FNGYCKEGT 275
                 + T
Sbjct: 705 LQSLVPQET 713



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 82/172 (47%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   +KE   + + +   G+      +N L+  L    E + A   F +    GL P+S
Sbjct: 534 LRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSS 593

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            + +I+I   C      EA +    M   G  P++ TF  L+N LC++GR+++ L +  +
Sbjct: 594 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 653

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           +   G  P+  TYN L+  LC  G V +A  +L     DG  P+  T++ ++
Sbjct: 654 LQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILL 705



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 44/102 (43%)

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           +Y +V+  L  G     A    +  +     P   TF  V++ALC   ++D AL +L  M
Sbjct: 178 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDM 237

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +H  +P+   Y  LI  L +  +  +A  L       G +P
Sbjct: 238 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 279


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 188/373 (50%), Gaps = 37/373 (9%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           F  LL  L   N+ E A +        G  P+   ++ +I  Y    DF +A K +  M 
Sbjct: 13  FAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMV 72

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            N   P V T+T +V+ LCK+GR K+A+++LD+M   GC PNI TYN +++GLC   +++
Sbjct: 73  KNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLD 132

Query: 208 EAYEMLMNVKNDG--------------------------------LKPDVYTYTAVMDGF 235
           EA +ML  +   G                                + PDV +YT V++G 
Sbjct: 133 EAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGL 192

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK G  + A  +L++   RG TP+VVT+++L +G+CK G   + +GLL  M K  C P+ 
Sbjct: 193 CKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 252

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           ++Y++LL  L + G I  A  +  EM R GF  D    N+ + GLC     + + ++ A 
Sbjct: 253 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC-----KAERVKKAK 307

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            VF++M ++    +  +Y +++  L K K+ D+A+  +  A E   I   + +  ++  L
Sbjct: 308 AVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGL 367

Query: 416 CGEGKIDKALLLL 428
           C  G+ D+A  L 
Sbjct: 368 CKGGRFDEACALF 380



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 193/386 (50%), Gaps = 10/386 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   + + +   G    V  +N  +  L   +  + A KF +      + P+  +++ 
Sbjct: 131 LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTT 187

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C   D   A +++D M + G  P+V T++ L++  CK G ++ A+ +LD M ++G
Sbjct: 188 VINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 247

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C+PN+  YN LL  L  +G + +A +ML+ ++  G  PDV +Y A +DG CK  R  +A 
Sbjct: 248 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 307

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + +  +ERG TPN  +++ L    CK+      + L++  +++  + D + Y+ LL+GL
Sbjct: 308 AVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGL 367

Query: 306 LKWGKIRPAVSIFKEMVRFGF-EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
            K G+   A ++F +++     E D    N +L   C +   +K     A Q+ ++M ++
Sbjct: 368 CKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK-----ALQIHKQMLER 422

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            +  +  T+ I++  L    +  +A   L   ++ G IP  +T+  ++ A+C  GK   A
Sbjct: 423 -NCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAA 481

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKL 450
           L L     +   +P   +Y  LIT L
Sbjct: 482 LELFEEAVKGGCVPDVVTYSALITGL 507



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 170/328 (51%), Gaps = 8/328 (2%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M D    P+  TF IL+  LC+S +L++A ++L +M  +GC P+   YN L+ G      
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
             +A++ L  +  +   P V TYT ++DG CK GR+ +A++LL+E  ++G +PN+ T+N 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +  G C+E    +   +L+ M  R   PD ++Y++ + GL K  ++  A    K + R  
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEAR---KFLARMP 177

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              D     +++ GLC KS +    L+ A ++ ++MT +    D  TY  +I    KG +
Sbjct: 178 VTPDVVSYTTVINGLC-KSGD----LDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGE 232

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            + A+  L   +++G  P  + +N+++ AL   G I KA  +L  M      P   SY+ 
Sbjct: 233 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 292

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
            I  L + E+   A A++   +++G  P
Sbjct: 293 CIDGLCKAERVKKAKAVFDRMVERGCTP 320



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 185/386 (47%), Gaps = 37/386 (9%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+++TF+I++R  C  N   +AR+++  M + G  P+   +  L++   K+    +A + 
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L +M +  C P + TY  ++ GLC  GR ++A ++L  +++ G  P++YTY  +++G C+
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 238 VGRSNEAMELLNEAIERG--------------------------------VTPNVVTFNT 265
             + +EA ++L E   RG                                VTP+VV++ T
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTT 187

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + NG CK G       +L  M  R C PD ++YS+L++G  K G++  A+ +   M++ G
Sbjct: 188 VINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 247

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              +    NSLL  L          +  A  +  +M ++    D  +Y   I  L K ++
Sbjct: 248 CRPNMVAYNSLLGAL-----HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             +A       +E G  P   +++ +++ LC + ++D A+ L+    E  +I     Y +
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTV 362

Query: 446 LITKLDQLEKSYDACALYGAALKQGV 471
           L+  L +  +  +ACAL+   L + +
Sbjct: 363 LLDGLCKGGRFDEACALFSKVLDEKI 388



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 186/414 (44%), Gaps = 15/414 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  L     + D +   G    V  ++ L+       E E A+         G  PN  
Sbjct: 194 KSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 253

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ ++          +A  ++  M   G+ P+V ++   ++ LCK+ R+K+A  V D+M
Sbjct: 254 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM 313

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PN  +Y+ L++ LC    +++A  ++   +      D+  YT ++DG CK GR 
Sbjct: 314 VERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRF 373

Query: 242 NEAMELLNEAIERGVT-PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           +EA  L ++ ++  +  P+V  +N + + +CK     K + + K M +RNC  + ++++ 
Sbjct: 374 DEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNI 432

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL    ++  A ++   MV  GF  D     +L+  +C K  +    LE    +FE+
Sbjct: 433 LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMC-KCGKSAAALE----LFEE 487

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
             K   V D  TY  +I  L      +EA + L   +++        +N +I      G 
Sbjct: 488 AVKGGCVPDVVTYSALITGLVHENMAEEAYL-LFTKLDVA------LWNAMILGYAENGS 540

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLIT-KLDQLEKSYDACALYGAALKQGVIP 473
            D  L L   + E    P+  ++   I+ KL + E    A  L+  A+K G  P
Sbjct: 541 GDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFP 594



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N  T++I++   C  +   +A  ++  M D G+ P+  T+  LV+++CK G+   ALE+ 
Sbjct: 426 NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELF 485

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           ++  + GC P++ TY+ L+ GL +    EEAY +         K DV  + A++ G+ + 
Sbjct: 486 EEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFT-------KLDVALWNAMILGYAEN 538

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNG-YCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           G  +  ++L  E IE  V PN  TF    +G   K  +  K  GL     K    PD   
Sbjct: 539 GSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFV 598

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEM 321
            +TL++   K G +  A  IF  M
Sbjct: 599 ANTLIDVFAKCGDLEEARRIFYSM 622


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 201/417 (48%), Gaps = 13/417 (3%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L+  +D+F   KK G   S    N LL  L   N +E     F E  S G  PN +T+
Sbjct: 193 SMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTY 252

Query: 124 SIMIRCYCNKN------DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           +IM+  YC  N      D  +A ++++ M  NG  P V T++  +  LC+ G ++ AL+ 
Sbjct: 253 TIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDF 312

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           +  +       N+  YN ++ GLC  G ++EA ++L  +K+ G+ PDVYTY+ ++ GFCK
Sbjct: 313 VRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCK 372

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G   + + L+ E     + P++V++++LF+G CK+      + + + +       D+ +
Sbjct: 373 QGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTA 432

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQ 356
           YS L+ G    G +  A  + +EMVR     D     SL+ G C M  W       +A +
Sbjct: 433 YSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLW------VNALE 486

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
            F  M +   +    T  ++I    +  + +EAL  ++     G  P   T+N VI  LC
Sbjct: 487 FFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLC 546

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            E K ++AL L  LM +   +PS   Y  LI    +   S  A  LY   LK GV P
Sbjct: 547 KERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTP 603



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 208/392 (53%), Gaps = 12/392 (3%)

Query: 90  DLLMALVMLNEQ-ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           DLL+ +   N   E AV  F +A   GL  ++ + + +++C    N     R + + M  
Sbjct: 183 DLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKS 242

Query: 149 NGYHPNVTTFTILVNSLCKSG------RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
            G  PNV T+TI++N  CK          ++A E+L++M R G  P + TY+  + GLC 
Sbjct: 243 TGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCR 302

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           VG VE A + + ++ +     +VY Y A++ G CK G  +EA+++L E    G++P+V T
Sbjct: 303 VGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYT 362

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           ++ L +G+CK+G   KG+ L++ MK  N  P  +SYS+L +GL K      ++ IF+++ 
Sbjct: 363 YSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLG 422

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
             G++ D+   + L++G CM+       L+ A+++ E+M +     DP  +  ++    K
Sbjct: 423 AAGYKYDQTAYSILIKGFCMQGD-----LDSAHKLMEEMVRNNLAPDPSNFESLVHGFCK 477

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
                 AL   +  +E G +P   T N +I A C EG++++AL L+  M      P+  +
Sbjct: 478 MGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFT 537

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           Y+ +I +L +  KS  A  L+   LK+ V+P 
Sbjct: 538 YNAVINRLCKERKSERALELFPLMLKRNVLPS 569



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 197/421 (46%), Gaps = 40/421 (9%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++  L    E + A+K   E  S G++P+ +T+SI+I  +C + D  +   +I+ M 
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +   P++ +++ L + LCK      +L++   +G  G K +   Y+ L+KG C  G ++
Sbjct: 388 YSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLD 447

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG---------------------------- 239
            A++++  +  + L PD   + +++ GFCK+G                            
Sbjct: 448 SAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVII 507

Query: 240 -------RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                  R  EA+ L+NE   +G+ PN+ T+N + N  CKE    + + L  LM KRN L
Sbjct: 508 DAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVL 567

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P  + YSTL++G  K    + A+ ++  M++ G   D      L+  LC +S      + 
Sbjct: 568 PSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSR-----MC 622

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +AY +F+KMT+     D  +Y  VI    +     +A    +  ++ GH+P  +T+ +++
Sbjct: 623 EAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLV 682

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
              C   +ID A +L+  M      P   +Y++LI    +      A  +     + GV+
Sbjct: 683 DGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVL 742

Query: 473 P 473
           P
Sbjct: 743 P 743



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 189/385 (49%), Gaps = 5/385 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++ + + + +K      S+  ++ L   L      + ++  F +  + G   +  
Sbjct: 372 KQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQT 431

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +SI+I+ +C + D   A K+++ M  N   P+ + F  LV+  CK G    ALE  + M
Sbjct: 432 AYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMM 491

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+I T N ++   C  GRVEEA  ++  ++  G+ P+++TY AV++  CK  +S
Sbjct: 492 LEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKS 551

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+EL    ++R V P+VV ++TL +G+ K+    K + L   M K    PD ++Y+ L
Sbjct: 552 ERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTIL 611

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +N L    ++  A ++FK+M   G   D+    S++ G C      K     A+ +F +M
Sbjct: 612 INILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRK-----AWALFNEM 666

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            ++  +    TY  ++    K  + D A + +      G  P  +T+N +I A    G +
Sbjct: 667 LQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNL 726

Query: 422 DKALLLLFLMYEHAKIPSRTSYDML 446
           DKAL +L  M E+  +P   +Y ML
Sbjct: 727 DKALEMLNEMKENGVLPDHMTYMML 751


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 199/431 (46%), Gaps = 40/431 (9%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN----------- 132
           S+ DF  LL A   L   ET + F  +   YG++ + ++F+I+I C+C            
Sbjct: 70  SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVL 129

Query: 133 ------------------------KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS 168
                                    N   +A  ++  M  +GY PNV  +  L++ LCK+
Sbjct: 130 GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKN 189

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G L  ALE+L++M + G   ++ TYN LL GLCY GR  +A  ML ++    + PDV T+
Sbjct: 190 GELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTF 249

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           TA++D F K G  +EA EL  E I+  V PN VT+N++ NG C  G          LM  
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           + C P+ ++Y+TL++G  K+  +   + +F+ M   GF  D    N+L+ G C     + 
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC-----QV 364

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             L  A  +F  M  +    D  T+ I++  L    + + AL+      E       + +
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           N +I  LC   K++KA  L   +      P   +Y ++I  L +     +A  L     +
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484

Query: 469 QGVIPQRKPQD 479
           +G+I Q   +D
Sbjct: 485 EGIICQMNAED 495



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 5/312 (1%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G   +V  +N L+  L    E   A++  +E    GL  +  T++ ++   C    + 
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +A +++  M     +P+V TFT L++   K G L EA E+  +M +    PN  TYN ++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            GLC  GR+ +A +    + + G  P+V TY  ++ GFCK    +E M+L       G  
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            ++ T+NTL +GYC+ G     + +   M  R   PD I++  LL+GL   G+I  A+  
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F +M      +     N ++ GLC     + D +E A+++F ++  +    D  TY I+I
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLC-----KADKVEKAWELFCRLPVEGVKPDARTYTIMI 463

Query: 378 RTLGKGKKTDEA 389
             L K     EA
Sbjct: 464 LGLCKNGPRREA 475



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 135/280 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   +++ + ++K G    V  +N LL  L        A +   +     + P+  
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +  + +  EA+++   M  +   PN  T+  ++N LC  GRL +A +  D M
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PN+ TYN L+ G C    V+E  ++   +  +G   D++TY  ++ G+C+VG+ 
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+++    + R VTP+++T   L +G C  G     +     M++       ++Y+ +
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           ++GL K  K+  A  +F  +   G + D R    ++ GLC
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 7/282 (2%)

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           S R ++A  +  +M      P+I  +  LL     + R E        ++  G+  D+Y+
Sbjct: 49  SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYS 108

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           +T ++  FC+  R + A+ +L + ++ G  P++VTF +L +G+C          L+ LM 
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WE 346
           K    P+ + Y+TL++GL K G++  A+ +  EM + G   D    N+LL GLC    W 
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW- 227

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
                 DA ++   M K+    D  T+  +I    K    DEA       I+    P  +
Sbjct: 228 -----SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           T+N++I  LC  G++  A     LM      P+  +Y+ LI+
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 142/333 (42%), Gaps = 40/333 (12%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  FT L+ +     R +  +    +M   G   ++ ++  L+   C   R+  A  +
Sbjct: 69  PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +P + T+ +++ GFC V R  +A  L+   ++ G  PNVV +NTL +G CK
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188

Query: 273 EG-----------TPMKGVG------------------------LLKLMKKRNCLPDKIS 297
            G              KG+G                        +L+ M KR+  PD ++
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           ++ L++  +K G +  A  ++KEM++   + +    NS++ GLCM        L DA + 
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR-----LYDAKKT 303

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           F+ M  K    +  TY  +I    K +  DE +         G      T+N +I   C 
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            GK+  AL +   M      P   ++ +L+  L
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)

Query: 48  NPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP  +     +D  +K   L E  +++  + +   + +   +N ++  L M      A K
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F   +S G  PN  T++ +I  +C      E  K+   M   G++ ++ T+  L++  C
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           + G+L+ AL++   M      P+I T+  LL GLC  G +E A     +++       + 
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            Y  ++ G CK  +  +A EL       GV P+  T+  +  G CK G   +   L++ M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482

Query: 287 KK 288
           K+
Sbjct: 483 KE 484



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 122/278 (43%), Gaps = 5/278 (1%)

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L  G  +  R E+A+ +   + +    P +  +T ++     + R    +    +    G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           ++ ++ +F  L + +C+       + +L  M K    P  +++ +LL+G     +I  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
           S+   MV+ G+E +  + N+L+ GLC K+ E    L  A ++  +M KK    D  TY  
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLC-KNGE----LNIALELLNEMEKKGLGADVVTYNT 216

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           ++  L    +  +A   L   ++    P  +TF  +I     +G +D+A  L   M + +
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             P+  +Y+ +I  L    + YDA   +     +G  P
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 201/422 (47%), Gaps = 45/422 (10%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM-- 146
           N LL A V   + + A   F        +P+S T+S +I  +C   DF +A +++D M  
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 147 -----------------FDNGY---------------HPNVTTFTILVNSLCKSGRLKEA 174
                             DNG                 P+V T+TILV++LCKS R+ +A
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDA 121

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
             +L+ M   GC PN+ TYN L+ G C +G ++EA  +   +  +   PDV+TY  ++DG
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           +CK  R  +  +LL E ++ G  PN +T+NTL +   K G  +    L ++M +R+C P 
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
             +++ +++   K G++  A  +F+ M   G   D    N ++ G C       + ++DA
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGAC-----RANRIDDA 296

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            Q+ E+MT+     D  TY  ++  L K  + DEA          G+    +T + +I  
Sbjct: 297 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 356

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYGAALKQGV 471
           LC   ++D A  LL  M  +   P   +Y +LI    K DQL+KS    A +   L +G 
Sbjct: 357 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSL---AFFSEMLDKGC 413

Query: 472 IP 473
           +P
Sbjct: 414 VP 415



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 178/352 (50%), Gaps = 5/352 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV  +  L+ AL        A     +    G APN  T++ +I  +C   +  EA  + 
Sbjct: 101 SVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLF 160

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           + M +N   P+V T+ IL++  CK  R ++  ++L +M + GC+PN  TYN L+  L   
Sbjct: 161 NQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKS 220

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G+  +A+ +   +     KP  +T+  ++D FCKVG+ + A EL     +RG  P++ T+
Sbjct: 221 GKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTY 280

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N + +G C+         LL+ M +  C PD ++Y+++++GL K  ++  A  +++ +  
Sbjct: 281 NIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRN 340

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G+ +D    ++L+ GLC KS      L+DA ++  +M +  S  D   Y I+I    K 
Sbjct: 341 GGYFLDVVTCSTLIDGLC-KSRR----LDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 395

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
            + D++L      ++ G +P  IT++ VI  LC   ++    +LL  M E  
Sbjct: 396 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 175/353 (49%), Gaps = 6/353 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     VD + K++ + +   I + + + G   +V  +N L+     L   + AV  
Sbjct: 100 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 159

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F++      +P+ +T++I+I  YC +    +  K++  M   G  PN  T+  L++SL K
Sbjct: 160 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 219

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           SG+  +A  +   M R  CKP+  T+N ++   C VG+++ AYE+   + + G  PD+YT
Sbjct: 220 SGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 279

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++ G C+  R ++A +LL    E G  P+VVT+N++ +G CK     +   + ++++
Sbjct: 280 YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 339

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
                 D ++ STL++GL K  ++  A  + +EM R G   D      L+ G C     +
Sbjct: 340 NGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC-----K 394

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            D L+ +   F +M  K  V    TY IVI  L K  +  +  + L   +E G
Sbjct: 395 ADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 93/195 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L    ++F  +   G    +  +N ++      N  + A +     +  G  P+  
Sbjct: 254 KVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV 313

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C  +   EA +V + + + GY  +V T + L++ LCKS RL +A ++L +M
Sbjct: 314 TYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM 373

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  P++  Y  L+ G C   +++++      + + G  P V TY+ V+D  CK  R 
Sbjct: 374 ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 433

Query: 242 NEAMELLNEAIERGV 256
            +   LL   +ERGV
Sbjct: 434 RDGCMLLKTMLERGV 448


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 190/363 (52%), Gaps = 5/363 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N +L  L    + + A++           P+  T++I+I   C ++   +A K++D
Sbjct: 216 VVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLD 275

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M + G  P+V T+ +L+N +CK GRL EA++ L+ M   GC+PN+ T+N +L+ +C  G
Sbjct: 276 EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG 335

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R  +A ++L ++   G  P V T+  +++  C+ G    A+++L +    G TPN +++N
Sbjct: 336 RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 395

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +G+CKE    + +  L +M  R C PD ++Y+TLL  L K GK+  AV I  ++   
Sbjct: 396 PLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 455

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G        N+++ GL      E+     A ++ ++M +K    D  TY  ++  L +  
Sbjct: 456 GCSPVLITYNTVIDGLSKVGKTER-----AIKLLDEMRRKGLKPDIITYSSLVSGLSREG 510

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           K DEA+   H    +G  P  IT+N+++  LC   + D+A+  L  M      P+  +Y 
Sbjct: 511 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 570

Query: 445 MLI 447
           +LI
Sbjct: 571 ILI 573



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 191/366 (52%), Gaps = 15/366 (4%)

Query: 50  RSLQAQRFVDRI----------KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           R LQ + + D I          K S + + + + D ++  G+   V  +N L+  +    
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
             + A+KF +   SYG  PN  T +I++R  C+   + +A K++  M   G  P+V TF 
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           IL+N LC+ G L  A+++L++M   GC PN  +YN LL G C   +++ A E L  + + 
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G  PD+ TY  ++   CK G+ + A+E+LN+   +G +P ++T+NT+ +G  K G   + 
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + LL  M+++   PD I+YS+L++GL + GK+  A+  F ++   G   +    NS++ G
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC     ++ +   AY +    +K+   T+  TY I+I  +       EAL  L+     
Sbjct: 541 LCKSRQTDRAIDFLAYMI----SKRCKPTE-ATYTILIEGIAYEGLAKEALDLLNELCSR 595

Query: 400 GHIPRT 405
           G + ++
Sbjct: 596 GLVKKS 601



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 190/382 (49%), Gaps = 8/382 (2%)

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           L  LV   E E   KF       G  P+    + +IR +C      +A  V++ +  +G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            P+V T+ +L++  CKSG +  AL+VLD   R+   P++ TYN +L+ LC  G++++A E
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +L         PDV TYT +++  CK     +AM+LL+E   +G  P+VVT+N L NG C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           KEG   + +  L  M    C P+ I+++ +L  +   G+   A  +  +M+R G      
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             N L+  LC      + LL  A  + EKM       +  +Y  ++    K KK D A+ 
Sbjct: 358 TFNILINFLC-----RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIE 412

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
           +L   +  G  P  +T+N ++ ALC +GK+D A+ +L  +      P   +Y+ +I  L 
Sbjct: 413 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 472

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           ++ K+  A  L     ++G+ P
Sbjct: 473 KVGKTERAIKLLDEMRRKGLKP 494



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 181/359 (50%), Gaps = 8/359 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+  T++++I  YC   +   A +V+D M      P+V T+  ++ +LC SG+LK+A
Sbjct: 179 GAVPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQA 235

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           +EVLD+  +  C P++ TY  L++  C    V +A ++L  ++N G KPDV TY  +++G
Sbjct: 236 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 295

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK GR +EA++ LN     G  PNV+T N +    C  G  M    LL  M ++ C P 
Sbjct: 296 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 355

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++++ L+N L + G +  A+ I ++M   G   +    N LL G C    +EK + + A
Sbjct: 356 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC----KEKKM-DRA 410

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            +  + M  +    D  TY  ++  L K  K D A+  L+     G  P  IT+N VI  
Sbjct: 411 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 470

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L   GK ++A+ LL  M      P   +Y  L++ L +  K  +A   +      G+ P
Sbjct: 471 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP 529


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 204/410 (49%), Gaps = 5/410 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +   D +   G       +  LL  L  + E   A+K           P+   +S 
Sbjct: 96  VKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYST 155

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G  P+V T+T L+   C +G+L EA  +L++M    
Sbjct: 156 IIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKN 215

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PNI TYN L+  LC  G+V+E+  +L  +   G+KPDV  Y+ +MDG+C VG   +A 
Sbjct: 216 INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAK 275

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++    ++ GV P+V ++N + NG CK     + + LL+ M  +N +PD ++YS+L++GL
Sbjct: 276 QIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGL 335

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I   + + KEM   G   +    NSLL GLC     +   L+ A  +F KM ++ 
Sbjct: 336 CKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLC-----KNQNLDKAIALFMKMKERG 390

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY  +I  L KG +  +      H +  G+     T+  +I  LC EG  D+AL
Sbjct: 391 IQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEAL 450

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            +   M ++  IP+  +++++I  L + +++  A  L    + +G++P R
Sbjct: 451 AMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFR 500



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 202/391 (51%), Gaps = 5/391 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           + +F  +L +LV +    T +    +  + G+ P+  T SI+I C+C+      +  V+ 
Sbjct: 10  IIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLG 69

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY PN      L+  LC  G +K++L   D++   G + +  +Y  LL GLC +G
Sbjct: 70  KILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIG 129

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A ++L  +++   +PDV  Y+ ++DG CK    +EA +L +E   RG+ P+V+T+ 
Sbjct: 130 ETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYT 189

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL  G+C  G  M+  GLL  M  +N  P+  +Y+TL++ L K GK++ + ++   M + 
Sbjct: 190 TLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKK 249

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G + D  + + L+ G C+    +K     A Q+F  M +     D  +Y I+I  L KGK
Sbjct: 250 GVKPDVVIYSILMDGYCLVGEVQK-----AKQIFLVMVQTGVNPDVYSYNIIINGLCKGK 304

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + DEA+  L   +    IP T+T++++I  LC  G+I   L L   M+   +  +  +Y+
Sbjct: 305 RVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYN 364

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            L+  L + +    A AL+    ++G+ P +
Sbjct: 365 SLLDGLCKNQNLDKAIALFMKMKERGIQPNK 395



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 139/280 (49%), Gaps = 1/280 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        +D + K   +KE  ++   + K G    V  ++ L+    ++ E + A +
Sbjct: 217 NPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQ 276

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F      G+ P+ ++++I+I   C      EA  ++  M      P+  T++ L++ LC
Sbjct: 277 IFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLC 336

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K GR+   L++  +M   G   N+ TYN LL GLC    +++A  + M +K  G++P+ Y
Sbjct: 337 KLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKY 396

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYTA++DG CK GR  +   L    + +G   +V T+  + +G CKEG   + + +   M
Sbjct: 397 TYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKM 456

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
           +   C+P+ +++  ++  LL+  +   A  +  EM+  G 
Sbjct: 457 EDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGL 496



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 156/303 (51%), Gaps = 7/303 (2%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L E   + + +     N ++  +N L+  L    + + +    +  +  G+ P+   
Sbjct: 198 AGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVI 257

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           +SI++  YC   +  +A+++   M   G +P+V ++ I++N LCK  R+ EA+ +L +M 
Sbjct: 258 YSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREML 317

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
                P+  TY+ L+ GLC +GR+    ++   + + G   ++ TY +++DG CK    +
Sbjct: 318 HKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLD 377

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK-LMKKRNCLPDKISYSTL 301
           +A+ L  +  ERG+ PN  T+  L +G CK G   KG  L + L+ K  C+ D  +Y+ +
Sbjct: 378 KAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCI-DVWTYTVM 436

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K G    A+++  +M     E +  + N++   + ++S  EKD  + A ++  +M
Sbjct: 437 ISGLCKEGMFDEALAMKSKM-----EDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEM 491

Query: 362 TKK 364
             K
Sbjct: 492 IAK 494



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 55/127 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L + I +F  +K+ G   +   +  L+  L      +     F      G   + W
Sbjct: 372 KNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVW 431

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+++MI   C +  F EA  +   M DNG  PN  TF I++ SL +     +A ++L +M
Sbjct: 432 TYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEM 491

Query: 182 GRIGCKP 188
              G  P
Sbjct: 492 IAKGLLP 498


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 195/394 (49%), Gaps = 5/394 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V  +N +L  L M        +   E       PN  TF+ +I   C    F   
Sbjct: 222 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERV 281

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            +V+  M ++G  P++  +  +++ +CK G LK A E+L++M   G KPN+  YN LLKG
Sbjct: 282 HEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKG 341

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC   R EE  E+L  + +     D  T+  ++D FC+ G  +  +ELL + +  G  P+
Sbjct: 342 LCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPD 401

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           V+T+ T+ NG+CKEG   + V LLK M    C P+ ISY+ +L GL    +   A  +  
Sbjct: 402 VITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMS 461

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           +M++ G  ++    N+L+  LC     +K L+E A ++ ++M       D  +Y  VI  
Sbjct: 462 QMIQQGCPLNPITFNTLINFLC-----KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 516

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           LGK  KTDEAL  L+  +  G  P TI ++++  AL  EG+I+K + +   + +      
Sbjct: 517 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 576

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              Y+ +I+ L +  ++  A       +  G +P
Sbjct: 577 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 610



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 190/384 (49%), Gaps = 10/384 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++       + E+A +    A++  + PN++T+  ++R  C +    +A  V+D M 
Sbjct: 93  YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P    + +++ + C+ G  + A+ VL+ +   GC  ++   N +L  +C  G V+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +L ++ + G +PDV +Y AV+ G C   R     EL+ E +     PN+VTFNTL 
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +  C+ G   +   +L  M +  C PD   Y+T+++G+ K G ++ A  I   M  +G +
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 328 VDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
            +    N+LL+GLC  + WEE +      ++  +M  K    D  T+ I++    +    
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETE------ELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 383

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D  +  L   +  G +P  IT+  VI   C EG ID+A++LL  M      P+  SY ++
Sbjct: 384 DRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 443

Query: 447 ITKLDQLEKSYDACALYGAALKQG 470
           +  L   E+  DA  L    ++QG
Sbjct: 444 LKGLCSAERWVDAEDLMSQMIQQG 467



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 160/335 (47%), Gaps = 8/335 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   LK   +I + +   G   +V  +N LL  L      E   +  +E        +  
Sbjct: 309 KEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV 368

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I++  +C         ++++ M  +G  P+V T+T ++N  CK G + EA+ +L  M
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GCKPN  +Y  +LKGLC   R  +A +++  +   G   +  T+  +++  CK G  
Sbjct: 429 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 488

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ELL + +  G +P++++++T+ +G  K G   + + LL +M  +   P+ I YS++
Sbjct: 489 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 548

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            + L + G+I   + +F  +       D  + N+++  LC +   E+     A +    M
Sbjct: 549 ASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER-----AIEFLAYM 603

Query: 362 TKKVSVTDPGTYGIVIRTL---GKGKKTDEALIHL 393
                V +  TY I+IR L   G  K+  E L  L
Sbjct: 604 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 119/224 (53%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + AV      ++ G  PN+ +++I+++  C+   + +A  ++  M   G   N  TF  L
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +N LCK G +++A+E+L QM   GC P++ +Y+ ++ GL   G+ +EA E+L  + N G+
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P+   Y+++     + GR N+ +++ +   +  +  + V +N + +  CK G   + + 
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
            L  M    C+P++ +Y+ L+ GL   G ++ A  +  E+   G
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 130/296 (43%), Gaps = 13/296 (4%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+ SLC +GR  EA   L   G       +  YN ++ G C  G++E A  +   V    
Sbjct: 64  LIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLESARRLAAAVP--- 117

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + P+ YTY  V+   C  GR  +A+ +L+E   RG  P    ++ +    C+ G     V
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +L+ +  R C  D  + + +LN +   G +  A+ + +++  FG E D    N++L+GL
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGL 237

Query: 341 CM-KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           CM K W          ++ E+M +     +  T+  +I  L +    +     L    E 
Sbjct: 238 CMAKRW------GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEH 291

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
           G  P    +  +I  +C EG +  A  +L  M  +   P+   Y+ L+  L   E+
Sbjct: 292 GCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAER 347



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 77/155 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ I++   +  +G +  +  ++ ++  L    + + A++  +   + G++PN+  +S 
Sbjct: 488 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +      +    +  ++ D + D     +   +  +++SLCK G  + A+E L  M   G
Sbjct: 548 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 607

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           C PN  TY  L++GL   G V+EA EML  + + G
Sbjct: 608 CVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 189/381 (49%), Gaps = 5/381 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E +  F+ +       S  DFN LL ++       T +    +  S+G+ P+ +T +I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C+ N    A   +  +   G+ P+ TTFT L+  LC  G++ EAL + D+M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+ TY  L+ GLC VG    A  +L +++    +P+V  ++ ++D  CK  +  EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + +E I +G++PN+VT+N+L +G CK         L+  M     +PD  + +T+++ L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +  A  +   M+  G E +    N+L+ G C+++  E D+   A +VF+ M  K 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN--EVDV---AVKVFDTMVHKD 345

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            V +  +Y  +I    K +  D+A+            P T+T+N +I  LC  G++  A+
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 426 LLLFLMYEHAKIPSRTSYDML 446
            L   M    +IP   +Y  L
Sbjct: 406 SLFHEMVARGQIPDLVTYRTL 426



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 190/399 (47%), Gaps = 7/399 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           I K G     + F  L+  L +  +   A+  F +    G  PN  T+  +I   C   +
Sbjct: 131 ILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 190

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
              A +++  M      PNV  F+ L++SLCK  ++ EA  +  +M   G  PNI TYN 
Sbjct: 191 TSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 250

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ GLC +   +    ++  + +  + PDV+T   V+D  CK G   EA ++++  I RG
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 310

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           V PNVVT+N L +G+C        V +   M  ++C+ + ISY+TL+NG  K   +  A+
Sbjct: 311 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 370

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +F+EM R     +    N+L+ GLC         L+DA  +F +M  +  + D  TY  
Sbjct: 371 YLFEEMSRQELTPNTVTYNTLIHGLC-----HVGRLQDAISLFHEMVARGQIPDLVTYRT 425

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
           +   L K +  D+A+  L  AIE  +  P    +  ++  +C  G+++ A  L   +   
Sbjct: 426 LSDYLCKNRHLDKAMA-LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              P+  +Y+++I  L +     +A  L+    K G  P
Sbjct: 485 GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 523



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 219/481 (45%), Gaps = 26/481 (5%)

Query: 1   MSSLVPSNSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRS-LQAQRFVD 59
           M SL P      ++++   H+K   FN L      +LST   +  K+ P S +   R + 
Sbjct: 26  MLSLPPP---FLSSSHNTFHSKPLHFNTL----DEALSTFNRMLHKQPPPSTVDFNRLLT 78

Query: 60  RIKAS-------PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
            I  +        L  ++D F      G    V     ++ +L  LN  + A    ++  
Sbjct: 79  SIAKTKHHSTLLSLSRQMDSF------GIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
             G  P++ TF+ +IR  C +    EA  + D M   G+ PNV T+  L+N LCK G   
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
            A+ +L  M +  C+PN+  ++ L+  LC   +V EA+ +   +   G+ P++ TY +++
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
            G CK+        L+NE ++  + P+V T NT+ +  CKEG   +   ++ +M  R   
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+ ++Y+ L++G     ++  AV +F  MV      +    N+L+ G C     +K    
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK---- 368

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A  +FE+M+++    +  TY  +I  L    +  +A+   H  +  G IP  +T+  + 
Sbjct: 369 -AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             LC    +DKA+ LL  +      P    Y  ++  + +  +  DA  L+     +G+ 
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 473 P 473
           P
Sbjct: 488 P 488



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 202/430 (46%), Gaps = 15/430 (3%)

Query: 21  NKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKA----SPLKERIDIFDSI 76
           N +   N+ V FA ++L  A+ L L   P    A  F   I+       + E + +FD +
Sbjct: 113 NSLCHLNR-VDFAFSAL--AKILKLGHQP---DATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
             +G   +V  +  L+  L  +     A++           PN   FS +I   C     
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            EA  +   M   G  PN+ T+  L++ LCK    K    ++++M      P++ T N +
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           +  LC  G V EA++++  + + G++P+V TY A+MDG C     + A+++ +  + +  
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
             NV+++NTL NGYCK  +  K + L + M ++   P+ ++Y+TL++GL   G+++ A+S
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           +F EMV  G   D     +L   LC     +   L+ A  + + +       D   Y  +
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLC-----KNRHLDKAMALLKAIEGSNWDPDIQIYTTI 461

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +  + +  + ++A     +    G  P   T+N +I  LC +G + +A  L   M ++  
Sbjct: 462 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGC 521

Query: 437 IPSRTSYDML 446
            P+  +Y+++
Sbjct: 522 SPNDCTYNLI 531



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 161/331 (48%), Gaps = 6/331 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + K   + E  +IF  +   G + ++  +N L+  L  L E +     
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            +E     + P+ +T + ++   C +    EA  V+D M   G  PNV T+  L++  C 
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              +  A++V D M    C  N+ +YN L+ G C +  V++A  +   +    L P+  T
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++ G C VGR  +A+ L +E + RG  P++VT+ TL +  CK     K + LLK ++
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
             N  PD   Y+T+L+G+ + G++  A  +F  +   G + +    N ++ GLC     +
Sbjct: 448 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC-----K 502

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           + LL +A ++F +M K     +  TY ++ R
Sbjct: 503 QGLLAEASKLFSEMNKNGCSPNDCTYNLITR 533



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 78/188 (41%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ I +F  +   G    +  +  L   L      + A+            P+   ++ 
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C   +  +AR +   +   G  PNV T+ I+++ LCK G L EA ++  +M + G
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN  TYN + +G           E+L  +   G   DV T T ++      G      
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVK 580

Query: 246 ELLNEAIE 253
           ++L + ++
Sbjct: 581 QILCKYVQ 588


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 202/394 (51%), Gaps = 8/394 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + ID+F  + +     S+ DF+     +    +    + F  +    G+A N +T +IMI
Sbjct: 48  DAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMI 107

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
            C+C       A  V+  +   GY P+ TTF  L+N LC   ++ EA+ ++ +M   GC+
Sbjct: 108 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQ 167

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN+ TYN ++ G+C  G    A ++L  +    +K DV+TY+ ++D  C+ G  + A+ L
Sbjct: 168 PNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISL 227

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E   +G+  ++VT+N+L  G CK G    GV LLK M  R  +P+ I+++ L++  +K
Sbjct: 228 FKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVK 287

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK++ A  ++KEM+  G   +    NSL+ G CM     ++ L +A  + + M +    
Sbjct: 288 EGKLQEANELYKEMITKGISPNTITYNSLMDGYCM-----QNRLSEANNMLDLMVRNNCS 342

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  T+  +I+   K K+ DE +       + G +  T+T++ ++Q  C  GK++ A  L
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEEL 402

Query: 428 LFLMYEHAKIPSRTSYDMLITKL---DQLEKSYD 458
              M     +P   +Y +L+  L    +LEK+ +
Sbjct: 403 FQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALE 436



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 185/384 (48%), Gaps = 5/384 (1%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E + +   + ++G   +V  +N ++  +    +   A+    +     +  + +T+
Sbjct: 149 SKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTY 208

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           S +I   C       A  +   M   G   ++ T+  LV  LCK+G+  + +++L  M  
Sbjct: 209 STIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTS 268

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               PN+ T+N L+      G+++EA E+   +   G+ P+  TY ++MDG+C   R +E
Sbjct: 269 RKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSE 328

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A  +L+  +    +P++VTF +L  GYCK     +G+ L + + KR  + + ++YS L+ 
Sbjct: 329 ANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQ 388

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           G  + GK+  A  +F+EMV  G   D      LL GLC     +   LE A ++FE + K
Sbjct: 389 GFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLC-----DNGKLEKALEIFEDLQK 443

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
                D   Y I+I  + KG K ++A          G  P  +T+  +I  LC +G + +
Sbjct: 444 SKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 503

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLI 447
           A +LL  M E    P+  +Y+ LI
Sbjct: 504 ANILLRKMEEDGNEPNDCTYNTLI 527



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 177/364 (48%), Gaps = 13/364 (3%)

Query: 23  IPQFNKLVVFAAASLSTAESLDL--KENPRSLQAQRF-----VDRI-KASPLKERIDIFD 74
           +  +N +V     S  T+ +LDL  K + R+++A  F     +D + +   +   I +F 
Sbjct: 170 VVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 229

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
            ++  G   S+  +N L+  L    +    V+   + +S  + PN  TF+++I  +  + 
Sbjct: 230 EMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEG 289

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
              EA ++   M   G  PN  T+  L++  C   RL EA  +LD M R  C P+I T+ 
Sbjct: 290 KLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFT 349

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+KG C V RV+E  ++   +   GL  +  TY+ ++ GFC+ G+   A EL  E +  
Sbjct: 350 SLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSL 409

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           GV P+V+T+  L +G C  G   K + + + ++K     D + Y+ ++ G+ K GK+  A
Sbjct: 410 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDA 469

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
            ++F  +   G + +      ++ GLC     +K  L +A  +  KM +  +  +  TY 
Sbjct: 470 WNLFCSLPCKGVKPNVMTYTVMISGLC-----KKGSLSEANILLRKMEEDGNEPNDCTYN 524

Query: 375 IVIR 378
            +IR
Sbjct: 525 TLIR 528



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 7/321 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  F+   + +  + +    L+   +M   G   NI T N ++   C   +   AY +
Sbjct: 63  PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  V   G +PD  T+  +++G C   + +EA+ L+   +E G  PNVVT+N++ NG CK
Sbjct: 123 LGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICK 182

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     + LL+ M +RN   D  +YST+++ L + G I  A+S+FKEM   G +     
Sbjct: 183 SGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVT 242

Query: 333 MNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
            NSL+ GLC    W       D  Q+ + MT +  + +  T+ ++I    K  K  EA  
Sbjct: 243 YNSLVGGLCKAGKWN------DGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANE 296

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
                I  G  P TIT+N+++   C + ++ +A  +L LM  +   P   ++  LI    
Sbjct: 297 LYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYC 356

Query: 452 QLEKSYDACALYGAALKQGVI 472
           ++++  +   L+    K+G++
Sbjct: 357 KVKRVDEGMKLFRKISKRGLV 377



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 145/297 (48%), Gaps = 35/297 (11%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  FN L+   V   + + A + + E  + G++PN+ T++ ++  YC +N   EA  ++
Sbjct: 274 NVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNML 333

Query: 144 DCMFDNGYHPNVTTFT-----------------------------------ILVNSLCKS 168
           D M  N   P++ TFT                                   ILV   C+S
Sbjct: 334 DLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQS 393

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G+L+ A E+  +M  +G  P++ TY  LL GLC  G++E+A E+  +++   +  D+  Y
Sbjct: 394 GKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMY 453

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           T +++G CK G+  +A  L      +GV PNV+T+  + +G CK+G+  +   LL+ M++
Sbjct: 454 TIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 513

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
               P+  +Y+TL+   L+ G +  +  + +EM   GF  D   +  ++  L    W
Sbjct: 514 DGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSAVW 570



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 7/252 (2%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P +  ++    G     + N  ++   +    G+  N+ T N + N +C+         +
Sbjct: 63  PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L  + K    PD  +++TL+NGL    K+  AV +   MV  G + +    NS++ G+C 
Sbjct: 123 LGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGIC- 181

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
           KS +    L+    +  KM ++    D  TY  +I +L +    D A I L   +E   I
Sbjct: 182 KSGDTSLALD----LLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA-ISLFKEMETKGI 236

Query: 403 PRT-ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
             + +T+N+++  LC  GK +  + LL  M     IP+  ++++LI    +  K  +A  
Sbjct: 237 KSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANE 296

Query: 462 LYGAALKQGVIP 473
           LY   + +G+ P
Sbjct: 297 LYKEMITKGISP 308


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 190/363 (52%), Gaps = 5/363 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N +L  L    + + A++           P+  T++I+I   C ++   +A K++D
Sbjct: 159 VVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLD 218

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M + G  P+V T+ +L+N +CK GRL EA++ L+ M   GC+PN+ T+N +L+ +C  G
Sbjct: 219 EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG 278

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R  +A ++L ++   G  P V T+  +++  C+ G    A+++L +    G TPN +++N
Sbjct: 279 RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 338

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +G+CKE    + +  L +M  R C PD ++Y+TLL  L K GK+  AV I  ++   
Sbjct: 339 PLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 398

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G        N+++ GL      E+     A ++ ++M +K    D  TY  ++  L +  
Sbjct: 399 GCSPVLITYNTVIDGLSKVGKTER-----AIKLLDEMRRKGLKPDIITYSSLVSGLSREG 453

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           K DEA+   H    +G  P  IT+N+++  LC   + D+A+  L  M      P+  +Y 
Sbjct: 454 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 513

Query: 445 MLI 447
           +LI
Sbjct: 514 ILI 516



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 191/366 (52%), Gaps = 15/366 (4%)

Query: 50  RSLQAQRFVDRI----------KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           R LQ + + D I          K S + + + + D ++  G+   V  +N L+  +    
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
             + A+KF +   SYG  PN  T +I++R  C+   + +A K++  M   G  P+V TF 
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           IL+N LC+ G L  A+++L++M   GC PN  +YN LL G C   +++ A E L  + + 
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G  PD+ TY  ++   CK G+ + A+E+LN+   +G +P ++T+NT+ +G  K G   + 
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + LL  M+++   PD I+YS+L++GL + GK+  A+  F ++   G   +    NS++ G
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC     ++ +   AY +    +K+   T+  TY I+I  +       EAL  L+     
Sbjct: 484 LCKSRQTDRAIDFLAYMI----SKRCKPTE-ATYTILIEGIAYEGLAKEALDLLNELCSR 538

Query: 400 GHIPRT 405
           G + ++
Sbjct: 539 GLVKKS 544



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 190/382 (49%), Gaps = 8/382 (2%)

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           L  LV   E E   KF       G  P+    + +IR +C      +A  V++ +  +G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            P+V T+ +L++  CKSG +  AL+VLD   R+   P++ TYN +L+ LC  G++++A E
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +L         PDV TYT +++  CK     +AM+LL+E   +G  P+VVT+N L NG C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           KEG   + +  L  M    C P+ I+++ +L  +   G+   A  +  +M+R G      
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             N L+  LC      + LL  A  + EKM       +  +Y  ++    K KK D A+ 
Sbjct: 301 TFNILINFLC-----RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIE 355

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
           +L   +  G  P  +T+N ++ ALC +GK+D A+ +L  +      P   +Y+ +I  L 
Sbjct: 356 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 415

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           ++ K+  A  L     ++G+ P
Sbjct: 416 KVGKTERAIKLLDEMRRKGLKP 437



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 181/359 (50%), Gaps = 8/359 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+  T++++I  YC   +   A +V+D M      P+V T+  ++ +LC SG+LK+A
Sbjct: 122 GAVPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQA 178

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           +EVLD+  +  C P++ TY  L++  C    V +A ++L  ++N G KPDV TY  +++G
Sbjct: 179 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 238

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK GR +EA++ LN     G  PNV+T N +    C  G  M    LL  M ++ C P 
Sbjct: 239 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 298

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++++ L+N L + G +  A+ I ++M   G   +    N LL G C    +EK + + A
Sbjct: 299 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC----KEKKM-DRA 353

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            +  + M  +    D  TY  ++  L K  K D A+  L+     G  P  IT+N VI  
Sbjct: 354 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 413

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L   GK ++A+ LL  M      P   +Y  L++ L +  K  +A   +      G+ P
Sbjct: 414 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP 472


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 216/412 (52%), Gaps = 8/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           ++   K+   I + ++  G    V  +N L+       E + A++     S   +AP+  
Sbjct: 153 RSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVV 209

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++R  C+     EA +V+D       +P+V T+TIL+ + C    + +A+++LD+M
Sbjct: 210 TYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEM 269

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GCKP++ TYN L+ G+C  GR++EA + L N+ + G KP+V T+  ++   C  GR 
Sbjct: 270 RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRW 329

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  LL++ + +G +P+VVTFN L N  C++    + + +L+ M K  C+P+ +SY+ L
Sbjct: 330 MDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPL 389

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+G  +  K+  A+   + MV  G   D    N+LL  LC     +   ++ A ++  ++
Sbjct: 390 LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALC-----KDGKVDAAVEILNQL 444

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           + K       TY  VI  L K  KT+ A+  L      G  P  IT++ +++ L  EGK+
Sbjct: 445 SSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKV 504

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           D+A+ +   M   +  PS  +Y+ ++  L + +++  A       +++G  P
Sbjct: 505 DEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKP 556



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 188/363 (51%), Gaps = 5/363 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N +L +L    + + A++           P+  T++I+I   CN +   +A K++D
Sbjct: 208 VVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLD 267

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G  P+V T+ +L+N +CK GRL EA++ L+ M   GCKPN+ T+N +L+ +C  G
Sbjct: 268 EMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTG 327

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R  +A  +L ++   G  P V T+  +++  C+      A+++L +  + G  PN +++N
Sbjct: 328 RWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYN 387

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +G+C+E    + +  L++M  R C PD ++Y+TLL  L K GK+  AV I  ++   
Sbjct: 388 PLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSK 447

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G        N+++ GL      E      A ++ E+M +K    D  TY  ++R LG+  
Sbjct: 448 GCSPVLITYNTVIDGLTKVGKTEY-----AVELLEEMRRKGLKPDIITYSTLLRGLGREG 502

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           K DEA+   H    +   P  +T+N ++  LC   +  +A+  L  M E    P+  +Y 
Sbjct: 503 KVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYT 562

Query: 445 MLI 447
           +LI
Sbjct: 563 ILI 565



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 196/385 (50%), Gaps = 8/385 (2%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N  L  LV   E E  +KF       G  P+    + +IR +C      +A ++++ + +
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           +G  P+V T+ +L+   CKSG + +ALEVL++M      P++ TYN +L+ LC  G+++E
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKE 226

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A E+L         PDV TYT +++  C      +AM+LL+E  ++G  P+VVT+N L N
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G CKEG   + +  L  M    C P+ I+++ +L  +   G+   A  +  +M+R G   
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                N L+  LC      K LL  A  V EKM K   V +  +Y  ++    + KK D 
Sbjct: 347 SVVTFNILINFLC-----RKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDR 401

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A+ +L   +  G  P  +T+N ++ ALC +GK+D A+ +L  +      P   +Y+ +I 
Sbjct: 402 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVID 461

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L ++ K+  A  L     ++G+ P
Sbjct: 462 GLTKVGKTEYAVELLEEMRRKGLKP 486



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 170/318 (53%), Gaps = 5/318 (1%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + + + + D ++K G    V  +N L+  +      + A+KF +   SYG  PN  T 
Sbjct: 257 SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITH 316

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           +I++R  C+   + +A +++  M   G  P+V TF IL+N LC+   L  A++VL++M +
Sbjct: 317 NIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 376

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            GC PN  +YN LL G C   +++ A E L  + + G  PD+ TY  ++   CK G+ + 
Sbjct: 377 HGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDA 436

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A+E+LN+   +G +P ++T+NT+ +G  K G     V LL+ M+++   PD I+YSTLL 
Sbjct: 437 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLR 496

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL + GK+  A+ IF +M     +      N+++ GLC      + +   AY V EK  K
Sbjct: 497 GLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMV-EKGCK 555

Query: 364 KVSVTDPGTYGIVIRTLG 381
                   TY I+I  + 
Sbjct: 556 PTE----ATYTILIEGIA 569


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 189/381 (49%), Gaps = 5/381 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E +  F+ +       S  DFN LL ++       T +    +  S+G+ P+ +T +I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C+ N    A   +  +   G+ P+ TTFT L+  LC  G++ EAL + D+M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+ TY  L+ GLC VG    A  +L +++    +P+V  ++ ++D  CK  +  EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + +E I +G++PN+VT+N+L +G CK         L+  M     +PD  + +T+++ L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +  A  +   M+  G E +    N+L+ G C+++  E D+   A +VF+ M  K 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN--EVDV---AVKVFDTMVHKD 345

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            V +  +Y  +I    K +  D+A+            P T+T+N +I  LC  G++  A+
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 426 LLLFLMYEHAKIPSRTSYDML 446
            L   M    +IP   +Y  L
Sbjct: 406 SLFHEMVARGQIPDLVTYRTL 426



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 190/399 (47%), Gaps = 7/399 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           I K G     + F  L+  L +  +   A+  F +    G  PN  T+  +I   C   +
Sbjct: 131 ILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 190

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
              A +++  M      PNV  F+ L++SLCK  ++ EA  +  +M   G  PNI TYN 
Sbjct: 191 TSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 250

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ GLC +   +    ++  + +  + PDV+T   V+D  CK G   EA ++++  I RG
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 310

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           V PNVVT+N L +G+C        V +   M  ++C+ + ISY+TL+NG  K   +  A+
Sbjct: 311 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 370

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +F+EM R     +    N+L+ GLC         L+DA  +F +M  +  + D  TY  
Sbjct: 371 YLFEEMSRQELTPNTVTYNTLIHGLC-----HVGRLQDAISLFHEMVARGQIPDLVTYRT 425

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
           +   L K +  D+A+  L  AIE  +  P    +  ++  +C  G+++ A  L   +   
Sbjct: 426 LSDYLCKNRHLDKAMA-LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              P+  +Y+++I  L +     +A  L+    K G  P
Sbjct: 485 GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 523



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 219/481 (45%), Gaps = 26/481 (5%)

Query: 1   MSSLVPSNSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRS-LQAQRFVD 59
           M SL P      ++++   H+K   FN L      +LST   +  K+ P S +   R + 
Sbjct: 26  MLSLPPP---FLSSSHNTFHSKPLHFNTL----DEALSTFNRMLHKQPPPSTVDFNRLLT 78

Query: 60  RIKAS-------PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
            I  +        L  ++D F      G    V     ++ +L  LN  + A    ++  
Sbjct: 79  SIAKTKHHSTLLSLSRQMDSF------GIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
             G  P++ TF+ +IR  C +    EA  + D M   G+ PNV T+  L+N LCK G   
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
            A+ +L  M +  C+PN+  ++ L+  LC   +V EA+ +   +   G+ P++ TY +++
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
            G CK+        L+NE ++  + P+V T NT+ +  CKEG   +   ++ +M  R   
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+ ++Y+ L++G     ++  AV +F  MV      +    N+L+ G C     +K    
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK---- 368

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A  +FE+M+++    +  TY  +I  L    +  +A+   H  +  G IP  +T+  + 
Sbjct: 369 -AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             LC    +DKA+ LL  +      P    Y  ++  + +  +  DA  L+     +G+ 
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 473 P 473
           P
Sbjct: 488 P 488



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 202/430 (46%), Gaps = 15/430 (3%)

Query: 21  NKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKA----SPLKERIDIFDSI 76
           N +   N+ V FA ++L  A+ L L   P    A  F   I+       + E + +FD +
Sbjct: 113 NSLCHLNR-VDFAFSAL--AKILKLGHQP---DATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
             +G   +V  +  L+  L  +     A++           PN   FS +I   C     
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            EA  +   M   G  PN+ T+  L++ LCK    K    ++++M      P++ T N +
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           +  LC  G V EA++++  + + G++P+V TY A+MDG C     + A+++ +  + +  
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
             NV+++NTL NGYCK  +  K + L + M ++   P+ ++Y+TL++GL   G+++ A+S
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           +F EMV  G   D     +L   LC     +   L+ A  + + +       D   Y  +
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLC-----KNRHLDKAMALLKAIEGSNWDPDIQIYTTI 461

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +  + +  + ++A     +    G  P   T+N +I  LC +G + +A  L   M ++  
Sbjct: 462 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGC 521

Query: 437 IPSRTSYDML 446
            P+  +Y+++
Sbjct: 522 SPNDCTYNLI 531



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 161/331 (48%), Gaps = 6/331 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + K   + E  +IF  +   G + ++  +N L+  L  L E +     
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            +E     + P+ +T + ++   C +    EA  V+D M   G  PNV T+  L++  C 
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              +  A++V D M    C  N+ +YN L+ G C +  V++A  +   +    L P+  T
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++ G C VGR  +A+ L +E + RG  P++VT+ TL +  CK     K + LLK ++
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
             N  PD   Y+T+L+G+ + G++  A  +F  +   G + +    N ++ GLC     +
Sbjct: 448 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC-----K 502

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           + LL +A ++F +M K     +  TY ++ R
Sbjct: 503 QGLLAEASKLFSEMNKNGCSPNDCTYNLITR 533


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 196/375 (52%), Gaps = 8/375 (2%)

Query: 87  DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           DF+    A+    +    + F  +    G+A N +T +IMI C+C       A  V+  +
Sbjct: 90  DFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKV 149

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
              GY P+ TTF  L+N LC  G++ +A+ ++D+M   GC+P++ TYN ++ G+C  G  
Sbjct: 150 MKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDT 209

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
             A++ML  ++   +K DV+TY+ ++D  C+ G  + A+ L  E   +G+  +VVT+N+L
Sbjct: 210 SLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             G CK G    G  LLK M  R  +P+ I+++ LL+  +K GK++ A  ++KEM+  G 
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             +    N+L+ G CM++      L +A  + + M +     D  T+  +I+     K+ 
Sbjct: 330 SPNIITYNTLMDGYCMQNR-----LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D+ +    +  + G +   +T++ ++Q  C  GKI  A  L   M  H  +P   +Y +L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444

Query: 447 ITKL---DQLEKSYD 458
           +  L    +LEK+ +
Sbjct: 445 LDGLCDNGKLEKALE 459



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 190/413 (46%), Gaps = 44/413 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +   + K G     + FN L+  L +  +   AV         G  P+  T++ ++   C
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGIC 204

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              D   A  ++  M +     +V T++ +++SLC+ G +  A+ +  +M   G K ++ 
Sbjct: 205 RSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L++GLC  G+  +   +L ++ +  + P+V T+  ++D F K G+  EA EL  E 
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD----------------- 294
           I RG++PN++T+NTL +GYC +    +   +L LM +  C PD                 
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384

Query: 295 ------------------KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                              ++YS L+ G  + GKI+ A  +F+EMV  G   D      L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLH 394
           L GLC     +   LE A ++FE + K  S  D G   Y  +I  + KG K ++A     
Sbjct: 445 LDGLC-----DNGKLEKALEIFEDLQK--SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                G  P  +T+  +I  LC +G + +A +LL  M E    P+  +Y+ LI
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 191/410 (46%), Gaps = 16/410 (3%)

Query: 26  FNKLVVFAAASLSTAESLDL--KENPRSLQAQRF-----VDRI-KASPLKERIDIFDSIK 77
           +N +V     S  T+ + D+  K   R+++A  F     +D + +   +   I +F  ++
Sbjct: 196 YNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
             G   SV  +N L+  L    +         +  S  + PN  TF++++  +  +    
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA ++   M   G  PN+ T+  L++  C   RL EA  +LD M R  C P+I T+  L+
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
           KG C V RV++  ++  N+   GL  +  TY+ ++ GFC+ G+   A EL  E +  GV 
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+V+T+  L +G C  G   K + + + ++K       + Y+T++ G+ K GK+  A ++
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F  +   G + +      ++ GLC     +K  L +A  +  KM +  +  +  TY  +I
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLC-----KKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550

Query: 378 RT-LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           R  L  G  T  A + +      G      +   VI  L   G++DK+ L
Sbjct: 551 RAHLRDGDLTASAKL-IEEMKSCGFSADASSIKMVIDMLL-SGELDKSFL 598



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 157/322 (48%), Gaps = 7/322 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +  F+   +++ ++ +    L+   Q+   G   NI T N ++   C   +   AY +
Sbjct: 86  PGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  V   G +PD  T+  +++G C  G+ ++A+ L++  +E G  P++VT+N++ NG C+
Sbjct: 146 LGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICR 205

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G       +L+ M++RN   D  +YST+++ L + G I  A+S+FKEM   G +     
Sbjct: 206 SGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265

Query: 333 MNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
            NSL+RGLC    W +  LL       + M  +  V +  T+ +++    K  K  EA  
Sbjct: 266 YNSLVRGLCKAGKWNDGALL------LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
                I  G  P  IT+N ++   C + ++ +A  +L LM  +   P   ++  LI    
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379

Query: 452 QLEKSYDACALYGAALKQGVIP 473
            +++  D   ++    K+G++ 
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVA 401


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 198/389 (50%), Gaps = 6/389 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCY 130
           +  S+ +DG   +V  +N L+ AL    ++E A+    +     G APN  T++ ++  +
Sbjct: 141 LLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAF 200

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +   A +++  M + G  P++ TF  +VN LCK+GR+++A ++ D+M R G  P+ 
Sbjct: 201 CRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDG 260

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +YN L+ G C  G + EA  +   +   G+ PDV T+T+++   C+ G    A+ L+ +
Sbjct: 261 VSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQ 320

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             ERG+  N  TF  L +G+C+ G     +  +K M++    P  + Y+ L+NG  K G+
Sbjct: 321 MRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGR 380

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A  +  EM   G + D    +++L G C     +    + A+++  KM KK  V D 
Sbjct: 381 MDEARELIHEMEAKGMKPDVVTYSTILSGYC-----KIGDTDSAFELNRKMLKKGVVPDA 435

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +IR L + ++  +A       +++G  P   T+  +I   C EG + KAL L   
Sbjct: 436 ITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDE 495

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           M +   +P   +Y +LI  L +  ++ +A
Sbjct: 496 MIKKGVLPDVVTYSVLIDGLSKSARTKEA 524



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 186/360 (51%), Gaps = 7/360 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G AP+   ++ ++    + +    AR+++  M  +G  PNV T+ ILV +LC  G+ +EA
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 175 LEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           L V+ D M   GC PN+ TYN L+   C  G V+ A  ++  ++  G++P + T+  V++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G CK GR  +A ++ +E    G+TP+ V++NTL +GYCK G   + + +   M ++  +P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D +++++L++ + + G +  AV++  +M   G  ++E    +L+ G C   +     L+D
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGF-----LDD 348

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A    ++M +         Y ++I    K  + DEA   +H     G  P  +T++ ++ 
Sbjct: 349 ALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILS 408

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             C  G  D A  L   M +   +P   +Y  LI  L +  +  DAC L+   L+ G+ P
Sbjct: 409 GYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQP 468



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 188/354 (53%), Gaps = 17/354 (4%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +++ G   S+  FN ++  L      E A K F E +  GL P+  +++ ++  YC    
Sbjct: 216 MREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGC 275

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA  V   M   G  P+V TFT L++++C++G L+ A+ ++ QM   G + N  T+  
Sbjct: 276 LHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTA 335

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G C  G +++A   +  ++   ++P V  Y  +++G+CK+GR +EA EL++E   +G
Sbjct: 336 LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           + P+VVT++T+ +GYCK G       L + M K+  +PD I+YS+L+ GL +  ++  A 
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC 455

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +F++M++ G + DE    +L+ G C +   +K     A  + ++M KK  + D  TY +
Sbjct: 456 ELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQK-----ALSLHDEMIKKGVLPDVVTYSV 510

Query: 376 VIRTLGKGKKTDEA---LIHLHHAI---------EMGHIPRTITFNNVIQALCG 417
           +I  L K  +T EA   L  L++            + H  RT  F +V+  L G
Sbjct: 511 LIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKG 564



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 188/403 (46%), Gaps = 45/403 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++   +FD + ++G       +N L+           A+  F+E +  G+ P+  
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C   +   A  ++  M + G   N  TFT L++  C++G L +AL  + +M
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                +P++  YN L+ G C +GR++EA E++  ++  G+KPDV TY+ ++ G+CK+G +
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A EL  + +++GV P+ +T+++L  G C+E        L + M +    PD+ +Y+TL
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTL 476

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-------------------- 341
           ++G  K G ++ A+S+  EM++ G   D    + L+ GL                     
Sbjct: 477 IDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDP 536

Query: 342 -------------------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
                                    +K +  K L+  A +V++ M  +    D   Y ++
Sbjct: 537 VPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVL 596

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           I    +G    +AL      +  G  P + +  ++++ L  EG
Sbjct: 597 IHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEG 639



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 130/276 (47%), Gaps = 15/276 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  ++   ++  G    V  ++ +L     + + ++A +   +    G+ P++ 
Sbjct: 377 KLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAI 436

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +IR  C +    +A ++ + M   G  P+  T+T L++  CK G +++AL + D+M
Sbjct: 437 TYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEM 496

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD-------- 233
            + G  P++ TY+ L+ GL    R +EA  +L  +  +   PD   Y A+M         
Sbjct: 497 IKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFK 556

Query: 234 -------GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
                  GF   G  N+A ++    ++R    +   ++ L +G+C+ G  MK +   K +
Sbjct: 557 SVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQL 616

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
            +    P+  S  +L+ GL + G    A ++ +E++
Sbjct: 617 LRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELL 652



 Score = 42.4 bits (98), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 42/208 (20%), Positives = 82/208 (39%), Gaps = 18/208 (8%)

Query: 43  LDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
           L L   P        +D   K   +++ + + D + K G    V  ++ L+  L      
Sbjct: 462 LQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSART 521

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF----------------FEARKVIDC 145
           + A +   +       P++  +  ++ C C   +F                 +A KV   
Sbjct: 522 KEAQRLLFKLYYEDPVPDNIKYEALMHC-CRTAEFKSVVALLKGFSMKGLMNQADKVYQS 580

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M D  +  + + +++L++  C+ G + +AL    Q+ R G  PN  +   L++GL   G 
Sbjct: 581 MLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGM 640

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
             EA  ++  + N     D  T  A++D
Sbjct: 641 TVEADNVIQELLNCCSLADAETSKALID 668


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 216/413 (52%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+   L + +D+F  + +     S++DF+ LL A+  + + +  +  + +    G+  N 
Sbjct: 57  IRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T +I++ C+C  +    A   +  M   G+ P++ TF  L+N  C+  R+ +AL + DQ
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M  +G KPN+  YN ++ GLC   +V+ A ++L  ++ DG+ PDV TY +++ G C  GR
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++A  +++   +R + P+V TFN L +   KEG   +     + M +R+  PD ++YS 
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+ GL  + ++  A  +F  MV  G   D    + L+ G C     +   +E   ++F +
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC-----KSKKVEHGMKLFCE 351

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M+++  V +  TY I+I+   +  K + A       +  G  P  IT+N ++  LC  GK
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           I+KAL++L  M ++       +Y+++I  + +  +  DA  +Y +   QG++P
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 196/404 (48%), Gaps = 5/404 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +++ ++  G   ++   N LL      ++   A+ F  +    G  P+  TF  ++  
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C  +  ++A  + D M   GY PNV  +  +++ LCKS ++  AL++L++M + G  P+
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TYN L+ GLC  GR  +A  M+  +    + PDV+T+ A++D   K GR +EA E   
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E I R + P++VT++ L  G C      +   +   M  + C PD ++YS L+NG  K  
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K+   + +F EM + G   +      L++G C         L  A ++F +M       +
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC-----RAGKLNVAEEIFRRMVFCGVHPN 395

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY +++  L    K ++AL+ L    + G     +T+N +I+ +C  G++  A  +  
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC 455

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +     +P   +Y  ++  L +     +A AL+    + G++P
Sbjct: 456 SLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 146/300 (48%), Gaps = 5/300 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  +   +D+ + ++KDG    V  +N L+  L        A +  S  +   + P+ +
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I     +    EA +  + M      P++ T+++L+  LC   RL EA E+   M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P++ TY+ L+ G C   +VE   ++   +   G+  +  TYT ++ G+C+ G+ 
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           N A E+    +  GV PN++T+N L +G C  G   K + +L  M+K     D ++Y+ +
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G+ K G++  A  I+  +   G   D     +++ GL      +K L  +A  +F KM
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL-----YKKGLRREADALFRKM 492



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 120/235 (51%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   + E  + ++ + +   +  +  ++ L+  L M +  + A + F    S G  P+ 
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+SI+I  YC         K+   M   G   N  T+TIL+   C++G+L  A E+  +
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  PNI TYN LL GLC  G++E+A  +L +++ +G+  D+ TY  ++ G CK G 
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
             +A ++      +G+ P++ T+ T+  G  K+G   +   L + MK+   LP++
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 214/467 (45%), Gaps = 43/467 (9%)

Query: 38  STAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM 97
           ++ ES +      SL+ Q     IK   L++ ID+F  + +     SV DF  L+  +V 
Sbjct: 34  ASGESCEAGFGGESLKLQSGFHEIKG--LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVR 91

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           +   +  +  + +     +  + ++F+I+I+C+C+ +    A      +   G HP+V T
Sbjct: 92  MERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVT 151

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           FT L++ LC   R+ EAL+   QM    C+PN+ T+  L+ GLC  GR+ EA  +L  + 
Sbjct: 152 FTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211

Query: 218 NDGLK------------------------------------PDVYTYTAVMDGFCKVGRS 241
            DGL+                                    P+V  Y+A++D  CK GR 
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A  L  E  E+G+ P++ T+N++  G+C  G       LL+ M +R   PD ++Y+ L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +N  +K GK   A  ++ EM+  G   +    NS++ G C     ++D L+ A  +F  M
Sbjct: 332 INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC-----KQDRLDAAEDMFYLM 386

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K    D  T+  +I      K+ D+ +  LH     G +  T+T+N +I   C  G +
Sbjct: 387 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 446

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           + AL L   M      P   + + L+  L    K  DA  ++ A  K
Sbjct: 447 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 493



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 184/381 (48%), Gaps = 16/381 (4%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F+E    G+ P+ +T++ MI  +C+   + +A +++  M +    P+V T+  L+N
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +  K G+  EA E+ D+M   G  PN  TYN ++ G C   R++ A +M   +   G  P
Sbjct: 334 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 393

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV+T+T ++DG+C   R ++ MELL+E   RG+  N VT+NTL +G+C  G     + L 
Sbjct: 394 DVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLS 453

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-----------GFEVDERM 332
           + M      PD ++ +TLL+GL   GK++ A+ +FK M +            G E D   
Sbjct: 454 QQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLT 513

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+ GL      E   LE A +++E+M  +  V D  TY  +I  L K  + DEA   
Sbjct: 514 YNILICGL----INEGKFLE-AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
                     P  +TFN +I   C  G++D  L L   M     +     Y  LI    +
Sbjct: 569 FVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRK 628

Query: 453 LEKSYDACALYGAALKQGVIP 473
           +     A  ++   +  GV P
Sbjct: 629 VGNINGALDIFQEMISSGVYP 649



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 211/489 (43%), Gaps = 83/489 (16%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L   +  F  I K G +  V  F  LL  L + +    A+ FF +       PN  TF
Sbjct: 128 SKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTF 187

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHP------------------------------ 153
           + ++   C +    EA  ++D M ++G  P                              
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247

Query: 154 ------NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                 NV  ++ +++SLCK GR  +A  +  +M   G  P++ TYN ++ G C  GR  
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A ++L  +    + PDV TY A+++ F K G+  EA EL +E + RG+ PN +T+N++ 
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMI 367

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G+CK+        +  LM  + C PD  +++TL++G     +I   + +  EM R G  
Sbjct: 368 DGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLV 427

Query: 328 VDERMMNSLLRGLCM---------------KSWEEKDL---------------LEDAYQV 357
            +    N+L+ G C+                S    D+               L+DA ++
Sbjct: 428 ANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 487

Query: 358 FEKMTKKVSVTDPG-----------TYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIP 403
           F+ M K     D             TY I+I  L   GK  + +E    + H    G +P
Sbjct: 488 FKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR---GIVP 544

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            TIT++++I  LC + ++D+A  +   M   +  P+  +++ LI    +  +  D   L+
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 604

Query: 464 GAALKQGVI 472
               ++G++
Sbjct: 605 CEMGRRGIV 613



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 156/318 (49%), Gaps = 21/318 (6%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           DR+ A+      D+F  +   G +  V  F  L+         +  ++   E    GL  
Sbjct: 374 DRLDAAE-----DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 428

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N+ T++ +I  +C   D   A  +   M  +G  P++ T   L++ LC +G+LK+ALE+ 
Sbjct: 429 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 488

Query: 179 DQMGRI-----------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
             M +            G +P++ TYN L+ GL   G+  EA E+   + + G+ PD  T
Sbjct: 489 KAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 548

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y++++DG CK  R +EA ++      +  +PNVVTFNTL NGYCK G    G+ L   M 
Sbjct: 549 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 608

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +R  + D I Y TL+ G  K G I  A+ IF+EM+  G   D   + ++L G     W  
Sbjct: 609 RRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF----W-S 663

Query: 348 KDLLEDAYQVFEKMTKKV 365
           K+ LE A  + E +   V
Sbjct: 664 KEELERAVAMLEDLQMSV 681



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 131/304 (43%), Gaps = 41/304 (13%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           L++A+++   M R    P++  +  L+  +  + R +    +   ++   ++ D+Y++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++  FC   +   A+    +  + G+ P+VVTF TL +G C E    + +     M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C P+ ++++TL+NGL + G+I  AV++            +RMM                 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALL-----------DRMM----------------- 211

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFN 409
            ED  Q  +            TYG ++  + K   T  AL  L    E+ HI P  + ++
Sbjct: 212 -EDGLQPTQI-----------TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I +LC +G+   A  L   M E    P   +Y+ +I       +  DA  L    L++
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 470 GVIP 473
            + P
Sbjct: 320 KISP 323


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 224/473 (47%), Gaps = 33/473 (6%)

Query: 22  KIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQ-----------RFVDRIKASPLK--E 68
           ++   + L   + A LS+   +    NP+SL A             F+ + K   +   +
Sbjct: 20  EVKLLSSLFTHSPAVLSSNPQISSANNPKSLHASPERISFQHGIPMFLHKCKTGSISVTQ 79

Query: 69  RIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
               FD + +     S+  FN LL  L  +         + +    GL P+  T +I+I 
Sbjct: 80  AHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILIN 134

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
           C CN N   E    +  +   GY P+V TFT L+  LC   R+ EA ++  +M ++GC P
Sbjct: 135 CLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTP 194

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKND------GLKPDVYTYTAVMDGFCKVGRSN 242
           N+ TY  L+KGLC +G +  A +    + ND        +P+V +Y+ ++DG CKVG   
Sbjct: 195 NVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWE 254

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA+ L NE +++GV PNVVTF+ L +  CKEG  +K   LL++M +   +P+  +Y++L+
Sbjct: 255 EAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLI 314

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-LEDAYQVFEKM 361
            G    G +  A  +F  M   G+E D    N L+ G C      K L +E+A ++F +M
Sbjct: 315 KGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYC------KTLKVEEAMKLFNEM 368

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV-IQALCGEGK 420
                  D  T G++++ L    K D+A   L   I+   +P+ +    + +  LC  G 
Sbjct: 369 LHVGMWPDVKTSGVLLKALFLAGKVDDAK-ELFRVIKPYAMPKDLCICCIFLDGLCKNGY 427

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           I +A+ L   +  +       ++  LI  L +  K   A  L+    ++G+ P
Sbjct: 428 IFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQP 480



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 196/400 (49%), Gaps = 15/400 (3%)

Query: 57  FVDRIKASPLKERI----DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
           F   IK   ++ RI     +F  ++K G   +V  +  L+  L  L     A+K+  E  
Sbjct: 164 FTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEML 223

Query: 113 S------YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
           +      +   PN  ++SI+I   C   ++ EA  + + M D G  PNV TF++L++ LC
Sbjct: 224 NDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLC 283

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K G++ +A ++L+ M +IG  PN+ TY  L+KG C VG +  A E+ +++ + G +PDV 
Sbjct: 284 KEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVI 343

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           +Y  +++G+CK  +  EAM+L NE +  G+ P+V T   L       G       L +++
Sbjct: 344 SYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVI 403

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           K      D       L+GL K G I  A+ +F E+  +  ++D      L+ GLC     
Sbjct: 404 KPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLC----- 458

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
           +   LE A+++FEK+ ++    D   Y  +I    K  + D+A I      E G  P  I
Sbjct: 459 KAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLI 518

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           T++ +++      K++K + LL  M E    P    Y ++
Sbjct: 519 TYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIV 558



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 170/343 (49%), Gaps = 6/343 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + K    +E I +F+ +   G   +V  F+ L+  L    +   A K 
Sbjct: 235 PNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKL 294

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
                  G+ PN +T++ +I+ +C   D   A+++   M   GY P+V ++ +L+N  CK
Sbjct: 295 LEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCK 354

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           + +++EA+++ ++M  +G  P+++T   LLK L   G+V++A E+   +K   +  D+  
Sbjct: 355 TLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCI 414

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
               +DG CK G   EAM+L NE     +  ++ TF  L +G CK G       L + + 
Sbjct: 415 CCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLY 474

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +    PD ++YS++++G  K G++  A  +F++M   G   D    + L+RG     + E
Sbjct: 475 EEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRG-----FYE 529

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
            + LE   Q+  +M +K    D G Y IV   + K +K  E L
Sbjct: 530 SNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWL 572



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 148/320 (46%), Gaps = 20/320 (6%)

Query: 166 CKSGRLK--EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           CK+G +   +A +  D M R     +I ++N LL GL  +    + + +   +   GL P
Sbjct: 70  CKTGSISVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D+ T   +++  C V R NE +  +   + RG  P+VVTF TL  G C E   ++   L 
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR------FGFEVDERMMNSLL 337
             M+K  C P+ ++Y TL+ GL   G I  A+   +EM+       F    +    + ++
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIII 244

Query: 338 RGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
            GLC + +WEE      A  +F +M  +    +  T+ ++I  L K  +  +A   L   
Sbjct: 245 DGLCKVGNWEE------AICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMM 298

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           I++G +P   T+ ++I+  C  G ++ A  L   M      P   SY+MLI    +  K 
Sbjct: 299 IQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKV 358

Query: 457 YDACALYGAALKQGVIPQRK 476
            +A  L+   L  G+ P  K
Sbjct: 359 EEAMKLFNEMLHVGMWPDVK 378



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 115/232 (49%), Gaps = 3/232 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E + +F+ +   G    V     LL AL +  + + A + F     Y +  +  
Sbjct: 354 KTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLC 413

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
              I +   C     FEA K+ + +       ++ TF  L++ LCK+G+L+ A E+ +++
Sbjct: 414 ICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKL 473

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P+   Y+ ++ G C  G+V++A  +   ++ +G  PD+ TY+ +M GF +  + 
Sbjct: 474 YEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKL 533

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK---LMKKRN 290
            + ++LL+  IE+ V P+   +  + +  CK+    + + LL+   + K RN
Sbjct: 534 EKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQKHRN 585


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 213/461 (46%), Gaps = 38/461 (8%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+  Q  +  + K + + E + + + +   G       FND+++ L   +    A K 
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCN------KNDFF------------------------ 137
            +     G AP+  T+  ++   C         D F                        
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRL 369

Query: 138 -EARKVI-DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
            +A+ V+ D +   G  P+V T+  L+    K G +  ALEVL  M   GCKPN+ +Y  
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G C +G+++EAY +L  +  DGLKP+   +  ++  FCK  R  EA+E+  E   +G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             P+V TFN+L +G C+       + LL+ M     + + ++Y+TL+N  L+ G+I+ A 
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +  EMV  G  +DE   NSL++GLC     +K     A  +FEKM +        +  I
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK-----ARSLFEKMLRDGHAPSNISCNI 604

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I  L +    +EA+      +  G  P  +TFN++I  LC  G+I+  L +   +    
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
             P   +++ L++ L +    YDAC L    ++ G +P  +
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 195/381 (51%), Gaps = 7/381 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           FN L+   V     + A    S+  +SYG+ P+  T++ +I  Y  +     A +V+  M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            + G  PNV ++TILV+  CK G++ EA  VL++M   G KPN   +NCL+   C   R+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            EA E+   +   G KPDVYT+ +++ G C+V     A+ LL + I  GV  N VT+NTL
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            N + + G   +   L+  M  +    D+I+Y++L+ GL + G++  A S+F++M+R G 
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
                  N L+ GLC        ++E+A +  ++M  + S  D  T+  +I  L +  + 
Sbjct: 596 APSNISCNILINGLC-----RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           ++ L         G  P T+TFN ++  LC  G +  A LLL    E   +P+  ++ +L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710

Query: 447 ITKLDQLEKSYDACALYGAAL 467
           +  +   +++ D    Y AA 
Sbjct: 711 LQSIIP-QETLDRRRFYNAAF 730



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 200/419 (47%), Gaps = 37/419 (8%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N +L  LV  N  + A   F +  S  + P  +TF ++++ +C  N+   A  ++  M 
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G  PN   +  L++SL K  R+ EAL++L++M  +GC P+ +T+N ++ GLC   R+ 
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-------------------- 247
           EA +M+  +   G  PD  TY  +M+G CK+GR + A +L                    
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364

Query: 248 ----LNEA--------IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
               L++A           G+ P+V T+N+L  GY KEG     + +L  M+ + C P+ 
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
            SY+ L++G  K GKI  A ++  EM   G + +    N L+   C     ++  + +A 
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC-----KEHRIPEAV 479

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++F +M +K    D  T+  +I  L +  +   AL  L   I  G +  T+T+N +I A 
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
              G+I +A  L+  M          +Y+ LI  L +  +   A +L+   L+ G  P 
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 142/279 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  ++ + +  DG   +   FN L+ A    +    AV+ F E    G  P+ +
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C  ++   A  ++  M   G   N  T+  L+N+  + G +KEA +++++M
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +  TYN L+KGLC  G V++A  +   +  DG  P   +   +++G C+ G  
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA+E   E + RG TP++VTFN+L NG C+ G    G+ + + ++     PD ++++TL
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           ++ L K G +  A  +  E +  GF  + R  + LL+ +
Sbjct: 676 MSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 168/360 (46%), Gaps = 10/360 (2%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           Y   P   ++++++    + N    A  V   M      P + TF +++ + C    +  
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           AL +L  M + GC PN   Y  L+  L    RV EA ++L  +   G  PD  T+  V+ 
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G CK  R NEA +++N  + RG  P+ +T+  L NG CK G       L   + K    P
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----P 351

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMV-RFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           + + ++TL++G +  G++  A ++  +MV  +G   D    NSL+ G     W+E  L+ 
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY----WKE-GLVG 406

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A +V   M  K    +  +Y I++    K  K DEA   L+     G  P T+ FN +I
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            A C E +I +A+ +   M      P   +++ LI+ L ++++   A  L    + +GV+
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 35/249 (14%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E ++IF  + + G    V  FN L+  L  ++E + A+    +  S G+  N+ 
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530

Query: 122 TFSIMIRCYCNKNDFFEARKVID---------------------C--------------M 146
           T++ +I  +  + +  EARK+++                     C              M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
             +G+ P+  +  IL+N LC+SG ++EA+E   +M   G  P+I T+N L+ GLC  GR+
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           E+   M   ++ +G+ PD  T+  +M   CK G   +A  LL+E IE G  PN  T++ L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710

Query: 267 FNGYCKEGT 275
                 + T
Sbjct: 711 LQSIIPQET 719



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 82/172 (47%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   +KE   + + +   G+      +N L+  L    E + A   F +    G AP++
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            + +I+I   C      EA +    M   G  P++ TF  L+N LC++GR+++ L +  +
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           +   G  P+  T+N L+  LC  G V +A  +L     DG  P+  T++ ++
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 43/102 (42%)

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           +Y +V+  L  G     A    +  +     P   TF  V++A C   +ID AL LL  M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +H  +P+   Y  LI  L +  +  +A  L       G +P
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 205/433 (47%), Gaps = 13/433 (3%)

Query: 49  PRSLQAQRFVDRIKASPLKERI-DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+   + + R+  S   +R  D+   + K G     +  N LL AL    E +     
Sbjct: 268 PNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTL 327

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF---DNGY--HPNVTTFTILV 162
            +E     + PN  TF I+I   C      EA +V + M     NG+   P+V T+  L+
Sbjct: 328 LAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLI 387

Query: 163 NSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + LCK GR +E L ++++M  +  C PN  TYNCL+ G C    +E A E+   +  DG+
Sbjct: 388 DGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGV 447

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P+V T   ++DG CK GR N A+E  NE   +G+  N VT+  L   +C      K + 
Sbjct: 448 PPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAME 507

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L   M +  C PD I Y TL++GL + GK+  A  +  +M   GF  D    N L+ G C
Sbjct: 508 LFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFC 567

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                 K+ L++AY++ ++M       D  TY  +I    K      A   +   ++ G 
Sbjct: 568 -----RKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGL 622

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS-YDMLITKLDQLEKSYDAC 460
           +P  +T+  +I A C  G +D+A+ +   M   +K+P  T  Y++LI  L +  +   A 
Sbjct: 623 VPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLAL 682

Query: 461 ALYGAALKQGVIP 473
           +L      +GV P
Sbjct: 683 SLMDDMKVKGVKP 695



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 174/326 (53%), Gaps = 6/326 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KAS ++   ++FD + KDG   +V   N L+  +        AV+FF+E    GL  N+ 
Sbjct: 428 KASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAV 487

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +IR +CN N+  +A ++ D M + G  P+   +  L++ L ++G+L  A  VL +M
Sbjct: 488 TYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKM 547

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+I ++N L+ G C   +++EAYEML  ++N G+KPD  TY  ++  F K G  
Sbjct: 548 KEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDF 607

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL-PDKISYST 300
           + A  L+ + ++ G+ P VVT+  L + YC  G   + + + + M   + + P+ + Y+ 
Sbjct: 608 STAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNI 667

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+N L +  ++  A+S+  +M   G + +    N++ +GL  K+W     L  A+++ ++
Sbjct: 668 LINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNW-----LSKAFELMDR 722

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKT 386
           MT+     D  T  I+   L    +T
Sbjct: 723 MTEHACNPDYITMEILTEWLSAVGET 748



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 188/389 (48%), Gaps = 14/389 (3%)

Query: 66  LKERIDIFDSIKKDGTNW-----SVSDFNDLLMALVMLNEQETAVKFFSEASSYG-LAPN 119
           + E +++F+ +    +N       V  +N L+  L  +  QE  +       S     PN
Sbjct: 356 VDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPN 415

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           + T++ +I  YC  +    AR++ D M  +G  PNV T   LV+ +CK GR+  A+E  +
Sbjct: 416 TVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFN 475

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M   G K N  TY  L++  C V  +E+A E+   +   G  PD   Y  ++ G  + G
Sbjct: 476 EMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAG 535

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           + + A  +L++  E G +P++V+FN L NG+C++    +   +LK M+     PD ++Y+
Sbjct: 536 KLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYN 595

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL++   K G    A  + K+MV+ G         +L+   C+        L++A ++F 
Sbjct: 596 TLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGN-----LDEAMKIFR 650

Query: 360 KMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            M+    V  P T  Y I+I +L +  + D AL  +      G  P T TFN + + L  
Sbjct: 651 DMSSTSKVP-PNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQE 709

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           +  + KA  L+  M EHA  P   + ++L
Sbjct: 710 KNWLSKAFELMDRMTEHACNPDYITMEIL 738



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 175/381 (45%), Gaps = 13/381 (3%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           ++E  V   S+ + + + PNS   + +I   C       A  V+  +   G      +  
Sbjct: 250 DEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCN 309

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L+ +L ++   K    +L +M  +  +PN+ T+  L+  LC   RV+EA E+   + N 
Sbjct: 310 ALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM-NG 368

Query: 220 G------LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG-VTPNVVTFNTLFNGYCK 272
           G      ++PDV TY  ++DG CKVGR  E + L+     +    PN VT+N L +GYCK
Sbjct: 369 GESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCK 428

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                    L   M K    P+ ++ +TL++G+ K G+I  AV  F EM   G + +   
Sbjct: 429 ASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVT 488

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             +L+R  C       + +E A ++F++M +     D   Y  +I  L +  K D A   
Sbjct: 489 YTALIRAFC-----NVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFV 543

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L    E G  P  ++FN +I   C + K+D+A  +L  M      P   +Y+ LI+   +
Sbjct: 544 LSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSK 603

Query: 453 LEKSYDACALYGAALKQGVIP 473
                 A  L    +K+G++P
Sbjct: 604 TGDFSTAHRLMKKMVKEGLVP 624


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 221/444 (49%), Gaps = 38/444 (8%)

Query: 51  SLQAQRFV----DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           SLQA   V     R  ++  +  +D F S+     + +   FN L+           A+ 
Sbjct: 171 SLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALS 230

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
             S+   +GL+P++ T++ ++  +C K    EAR ++  M   G  P   T+  LV++  
Sbjct: 231 TLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYA 290

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL-KPDV 225
           + G +K+A +V++ M   G +P++ TYN L  GLC  G+V+EA+++   ++  G+  PDV
Sbjct: 291 RLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDV 350

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            TY  ++D   K  RS++A+ LL E  E+GV  ++VT N +  G C+EG   + +G L++
Sbjct: 351 VTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEM 410

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KS 344
           M +    PD I+Y+TL++   K G +  A  +  EMVR G ++D   +N+LL  LC  K 
Sbjct: 411 MTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKR 470

Query: 345 WEEKDLL-----------------------------EDAYQVFEKMTKKVSVTDPGTYGI 375
           +EE + L                             E A  ++++M K+       TY  
Sbjct: 471 YEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNT 530

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I+ L    K  EA+  L+  +EMG +P   T+N +I A C EG ++KA      M E++
Sbjct: 531 LIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENS 590

Query: 436 KIPSRTSYDMLITKL---DQLEKS 456
             P   + + L+  L    +LEK+
Sbjct: 591 FKPDVVTCNTLMNGLCLYGRLEKA 614



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 195/430 (45%), Gaps = 41/430 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   +   +KK+G   + + +N L+ A   L   + A       +++G  P+ WT+++
Sbjct: 260 LGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNV 319

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           +    C      EA K+ D M   G   P+V T+  LV++  K  R  +AL +L++M   
Sbjct: 320 LAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREK 379

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG----- 239
           G K ++ T+N ++KGLC  G++EEA   L  +  +GL PDV TY  ++D  CK G     
Sbjct: 380 GVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKA 439

Query: 240 ------------------------------RSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
                                         R  EA ELL    +RG  P+ V++ T+   
Sbjct: 440 FVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAA 499

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           Y KE  P   + L   M KR   P   +Y+TL+ GL   GK+  A+    E++  G   D
Sbjct: 500 YFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPD 559

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
           +   N ++   C    +E DL E A+Q   KM +     D  T   ++  L    + ++A
Sbjct: 560 DTTYNIIIHAYC----KEGDL-EKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKA 614

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           +      +E G     IT+N +IQALC +  +D AL     M      P   +Y++L++ 
Sbjct: 615 MKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSA 674

Query: 450 LDQLEKSYDA 459
           L +  +S +A
Sbjct: 675 LSEAGRSVEA 684



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 186/398 (46%), Gaps = 6/398 (1%)

Query: 62  KASPLKERIDIFDSIKKDG-TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +A  + E   + D +++ G  +  V  +N L+ A         A+    E    G+  + 
Sbjct: 326 QAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSL 385

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T +I+++  C +    EA   ++ M + G  P+V T+  L+++ CK+G + +A  ++D+
Sbjct: 386 VTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDE 445

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G K +  T N LL  LC   R EEA E+L      G  PD  +Y  VM  + K  +
Sbjct: 446 MVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYK 505

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A+ L +E I+R +TP++ T+NTL  G    G   + +  L  + +   +PD  +Y+ 
Sbjct: 506 PEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNI 565

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++   K G +  A     +MV   F+ D    N+L+ GLC+        LE A ++FE 
Sbjct: 566 IIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGR-----LEKAMKLFES 620

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
             +K    D  TY  +I+ L K    D AL         G  P   T+N ++ AL   G+
Sbjct: 621 WVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGR 680

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
             +A  +L  + E  K+  R  Y  + + ++ +E   D
Sbjct: 681 SVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKD 718



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 36/275 (13%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++D + K     S+S +N L+  L  + +   A+   +E    GL P+  T++I+I  YC
Sbjct: 512 LWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYC 571

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            + D  +A +  + M +N + P+V T   L+N LC  GRL++A+++ +     G K ++ 
Sbjct: 572 KEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVI 631

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN-- 249
           TYN L++ LC    V+ A     +++  GL+PDV+TY  ++    + GRS EA ++L+  
Sbjct: 632 TYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKL 691

Query: 250 -------------------EAIERGVTPNV---------------VTFNTLFNGYCKEGT 275
                              EA+E G  P V                ++N      C  G 
Sbjct: 692 NESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQ 751

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             +   +L  M ++    D  +Y TL+ GL+K  K
Sbjct: 752 LKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 93/178 (52%), Gaps = 11/178 (6%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ + +F+S  + G    V  +N L+ AL   N+ +TA++FF++    GL P+ +T+++
Sbjct: 611 LEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNV 670

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNG------YHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           ++          EA+K++  + ++G      ++P++ +    V    ++G+  E    ++
Sbjct: 671 LLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAV----ETGKDPEVKSDIE 726

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
            +G      + ++YN  +K LC  G+++EA  +L  +   G+  D  TY  +M+G  K
Sbjct: 727 SVGNTQGD-DQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 187/376 (49%), Gaps = 5/376 (1%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
             + + A + F E     L P+  TF+ ++   C K    E+ ++ D +   G  PN+ T
Sbjct: 273 FGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFT 332

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F I +  LCK G L  A+ +L  + R G +P++ TYN ++ GLC   RV EA E L  + 
Sbjct: 333 FNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMV 392

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           N G +P+ +TY +++DG+CK G   +A  +L +A+ +G  P+  T+ +L NG+C++G P 
Sbjct: 393 NGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPD 452

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           + + + K    +   P  I Y+TL+ GL + G I PA+ +  EM   G + D    N ++
Sbjct: 453 QAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLII 512

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            GLC     +   L DA  +      K  + D  TY  ++    +  K D A+  ++   
Sbjct: 513 NGLC-----KMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMW 567

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             G  P  IT+N ++  LC   K ++ + +   M E    P+  +Y+ +I  L   +K  
Sbjct: 568 SQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVN 627

Query: 458 DACALYGAALKQGVIP 473
           +A  L G    +G+ P
Sbjct: 628 EAVDLLGEMKSKGLTP 643



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 201/390 (51%), Gaps = 8/390 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++FD + +      V+ FN L+ AL        + + F +    G+ PN +TF+I I+  
Sbjct: 281 ELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGL 340

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +     A +++ C+   G  P+V T+  ++  LC+  R+ EA E L +M   G +PN 
Sbjct: 341 CKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPND 400

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN ++ G C  G V +A  +L +    G KPD +TY ++++GFC+ G  ++AM +  +
Sbjct: 401 FTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + +G+ P+++ +NTL  G C++G  +  + L+  M ++ C PD  +Y+ ++NGL K G 
Sbjct: 461 GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGC 520

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A  +  + +  G   D    N+L+ G C +       L+ A ++  +M  +    D 
Sbjct: 521 LSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLK-----LDSAIELVNRMWSQGMTPDV 575

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  ++  L K  K++E +       E G  P  IT+N +I++LC   K+++A+ LL  
Sbjct: 576 ITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGE 635

Query: 431 MYEHAKIPSRTSYDMLIT---KLDQLEKSY 457
           M      P   S+  LIT   K+  L+ +Y
Sbjct: 636 MKSKGLTPDVVSFGTLITGFCKVGDLDGAY 665



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 221/457 (48%), Gaps = 42/457 (9%)

Query: 52  LQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA 111
           ++A RF  R     ++E +D F+ +     + SV  +N ++  LV       A K +   
Sbjct: 159 VEAMRFYGR--KGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRM 216

Query: 112 SSYGLAPNSWTFSIMIRCYCNK-----------------------------NDFFE---- 138
               +  + +T++I I+ +C                                 F+E    
Sbjct: 217 KDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDN 276

Query: 139 --ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
             AR++ D M +    P+VTTF  LV++LCK G + E+  + D++ + G  PN+ T+N  
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIF 336

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           ++GLC  G ++ A  +L  V  +GL+PDV TY  V+ G C+  R  EA E L++ +  G 
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGF 396

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            PN  T+N++ +GYCK+G  +    +LK    +   PD+ +Y +L+NG  + G    A++
Sbjct: 397 EPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMA 456

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           +FK+ +  G      + N+L++GLC     ++ L+  A Q+  +M +K    D  TY ++
Sbjct: 457 VFKDGLGKGLRPSIIVYNTLIKGLC-----QQGLILPALQLMNEMAEKGCKPDIWTYNLI 511

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I  L K     +A   +  AI  G IP   T+N ++   C + K+D A+ L+  M+    
Sbjct: 512 INGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGM 571

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            P   +Y+ L+  L +  KS +   ++ A  ++G  P
Sbjct: 572 TPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAP 608



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 184/371 (49%), Gaps = 6/371 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A +   +A   G  P+ +T+  ++  +C   D  +A  V       G  P++  +  L+ 
Sbjct: 419 ANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIK 478

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LC+ G +  AL+++++M   GCKP+I TYN ++ GLC +G + +A  ++ +    G  P
Sbjct: 479 GLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIP 538

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D++TY  ++DG+C+  + + A+EL+N    +G+TP+V+T+NTL NG CK     + + + 
Sbjct: 539 DIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIF 598

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           K M ++ C P+ I+Y+T++  L    K+  AV +  EM   G   D     +L+ G C  
Sbjct: 599 KAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFC-- 656

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDP-GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
              +   L+ AY +F  M K+  V+    TY I+I    +      AL       + G  
Sbjct: 657 ---KVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCD 713

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P   T+  +I   C  G +++    L    E   IPS T++  ++  L    K  +A  +
Sbjct: 714 PDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGI 773

Query: 463 YGAALKQGVIP 473
               +++ ++P
Sbjct: 774 IHLMVQKDIVP 784



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 36/290 (12%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + + + + G    +  +N ++  L  +     A     +A + G  P+ +T++ ++  
Sbjct: 490 LQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 549

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC +     A ++++ M+  G  P+V T+  L+N LCK+ + +E +E+   M   GC PN
Sbjct: 550 YCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 609

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG---------R 240
           I TYN +++ LC   +V EA ++L  +K+ GL PDV ++  ++ GFCKVG         R
Sbjct: 610 IITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFR 669

Query: 241 SNE---------------------------AMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             E                           A+ L +E  + G  P+  T+  L +G+CK 
Sbjct: 670 GMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKT 729

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           G   +G   L    ++  +P   ++  +LN L    K++ AV I   MV+
Sbjct: 730 GNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQ 779



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 37/262 (14%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I D+I K G    +  +N L+       + ++A++  +   S G+ P+  T++ ++   C
Sbjct: 528 IGDAITK-GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLC 586

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 E  ++   M + G  PN+ T+  ++ SLC S ++ EA+++L +M   G  P++ 
Sbjct: 587 KTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVV 646

Query: 192 TYNCLLKGLCYVGRVEEAY------------------------------------EMLMN 215
           ++  L+ G C VG ++ AY                                     +   
Sbjct: 647 SFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSE 706

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +K +G  PD YTY  ++DGFCK G  N+  + L E IE+G  P++ TF  + N  C E  
Sbjct: 707 MKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHK 766

Query: 276 PMKGVGLLKLMKKRNCLPDKIS 297
             + VG++ LM +++ +PD ++
Sbjct: 767 VQEAVGIIHLMVQKDIVPDTVN 788



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/332 (21%), Positives = 123/332 (37%), Gaps = 76/332 (22%)

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE---------------------- 250
           L+     G K  ++TY +++      G+ NE   LL+E                      
Sbjct: 107 LIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYG 166

Query: 251 ---AIERGV-----------TPNVVTFNTLFN-----GY--------------------- 270
               I+  V            P+V ++N + N     GY                     
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226

Query: 271 ---------CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
                    C+ G P   + LL+ M    C  + ++Y T++ G  ++G    A  +F EM
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +      D    N L+  LC K +     + ++ ++F+K+ K+    +  T+ I I+ L 
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGF-----VLESERLFDKVLKRGVCPNLFTFNIFIQGLC 341

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K    D A+  L      G  P  +T+N VI  LC + ++ +A   L  M      P+  
Sbjct: 342 KEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDF 401

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +Y+ +I    +     DA  +   A+ +G  P
Sbjct: 402 TYNSIIDGYCKKGMVVDANRILKDAVFKGFKP 433


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 218/450 (48%), Gaps = 40/450 (8%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           D  +   ++E +++F+ +       SV  +N ++  LV       A K +      G+ P
Sbjct: 85  DYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYP 144

Query: 119 NSWTFSIMIRCYC-----------------------------------NKNDFFEARKVI 143
           + +T +I ++ +C                                    +N   EA  + 
Sbjct: 145 DVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLF 204

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M   G  P++ TF  L++ LCK G ++E+ ++  ++ + G  PN+ T+N  ++GLC  
Sbjct: 205 DEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRK 264

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G ++EA  +L ++ ++GL PDV +Y  ++ GFCK  +  EA   L++ +  GV PN  T+
Sbjct: 265 GAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTY 324

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           NT+ NG+CK G       +L+    +  +PD+ +YS+L+NGL   G +  A+++F E + 
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            GF+    + N+L++GL      ++ L+  A Q+ + M +     D  TY +V+  L K 
Sbjct: 385 KGFKHSIILYNTLVKGL-----SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
               +A   L+ AI  G IP   TFN +I   C +  +DKA+ +L  M  H   P   +Y
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + L+  L +  K  +    + A L++G  P
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 196/394 (49%), Gaps = 8/394 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   +FD + K G    +  FN L+  L      + + K FS+    G+ PN +TF+I I
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           +  C K    EA ++++ +   G  P+V ++  L+   CK  +L EA   L +M   G +
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  TYN ++ G C  G ++ A ++L +    G  PD +TY+++++G C  G  N AM +
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             EA+E+G   +++ +NTL  G  K+G  ++ + L+K M +  C PD  +Y+ ++NGL K
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G +  A  I  + +  G   D    N+L+ G C +   +K     A ++ + M      
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDK-----AIEILDTMLSHGIT 493

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  TY  ++  L K +K D  +      +E G  P  IT+N +I++ C + K+ +A+ L
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMEL 553

Query: 428 LFLMYEHAKIPSRTSYDMLITKL---DQLEKSYD 458
              M      P   +   LI  L    +L+K+Y+
Sbjct: 554 FKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 191/402 (47%), Gaps = 5/402 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + +++   G  ++   +  ++      N Q  A   F E    G+ P+  TF+ +I   C
Sbjct: 168 LLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLC 227

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            K +  E+ K+   +   G  PN+ TF I +  LC+ G + EA  +L+ +   G  P++ 
Sbjct: 228 KKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVI 287

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           +YN L+ G C   ++ EA   L  + N G++P+ +TY  +++GFCK G    A ++L +A
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           + +G  P+  T+++L NG C +G   + + +     ++      I Y+TL+ GL K G +
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLV 407

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ + K+M+  G   D    N ++ GLC     +   L DA  +      K  + D  
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLC-----KMGCLSDANGILNDAIAKGCIPDIF 462

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           T+  +I    K +  D+A+  L   +  G  P  IT+N ++  LC   K+D  +     M
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAM 522

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            E    P+  +Y++LI    +  K  +A  L+     +G+ P
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 184/389 (47%), Gaps = 6/389 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++         + A K   +A   G  P+ +T+S +I   CN  D   A  V     
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G+  ++  +  LV  L K G + +AL+++  M   GC P+I TYN ++ GLC +G + 
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +L +    G  PD++T+  ++DG+CK    ++A+E+L+  +  G+TP+V+T+NTL 
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG CK       V   K M ++ C P+ I+Y+ L+    K  K+  A+ +FKEM   G  
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT-DPGTYGIVIRTLGKGKKT 386
            D   + +L+ GLC         L+ AY++F  + K+   +     + I+I    +    
Sbjct: 564 PDIVTLCTLICGLCSNGE-----LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNV 618

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
             A    H        P   T+  +I + C  G ID A   L        +PS T+   +
Sbjct: 619 SMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKV 678

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +  L    +  +A  +    ++ G++P+ 
Sbjct: 679 LNCLCVTHRLSEAVVIINLMVQNGIVPEE 707



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 174/383 (45%), Gaps = 40/383 (10%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++R Y  K    EA  V + M      P+V ++  ++N L + G   +A +V  +M  IG
Sbjct: 82  IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ T+   +K  C  GR   A  +L N+   G + +  +Y AV+ GF K     EA 
Sbjct: 142 IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAY 201

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNC------------- 291
            L +E +++G+ P+++TFN L +  CK+G   +   L  K+MK+  C             
Sbjct: 202 HLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGL 261

Query: 292 ---------------------LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
                                 PD ISY+TL+ G  K  K+  A     +MV  G E +E
Sbjct: 262 CRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N+++ G C     +  ++++A ++      K  + D  TY  +I  L      + A+
Sbjct: 322 FTYNTIINGFC-----KAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              + A+E G     I +N +++ L  +G + +AL L+  M EH   P   +Y++++  L
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            ++    DA  +   A+ +G IP
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIP 459



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 1/276 (0%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +   + + G +  +  +N ++  L  +     A    ++A + G  P+ +TF+ +I
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             YC + +  +A +++D M  +G  P+V T+  L+N LCK+ +L   ++    M   GC 
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PNI TYN L++  C   +V EA E+   +K  GL PD+ T   ++ G C  G  ++A EL
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588

Query: 248 -LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
            +    E   + +   FN + N +C++        L   M   +C PD  +Y  +++   
Sbjct: 589 FVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYC 648

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           K G I  A +   E +  G          +L  LC+
Sbjct: 649 KTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCV 684



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 116/246 (47%), Gaps = 8/246 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L   +D F ++ + G   ++  +N L+ +     +   A++ F E  + GL P+  
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT--FTILVNSLCKSGRLKEALEVLD 179
           T   +I   C+  +  +A ++     +  Y  + +T  F I++N+ C+   +  A ++  
Sbjct: 568 TLCTLICGLCSNGELDKAYELF-VTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFH 626

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +MG   C P+  TY  ++   C  G ++ A+  L+   + GL P   T   V++  C   
Sbjct: 627 KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTH 686

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R +EA+ ++N  ++ G+ P  V  N++F    KE    K V +  L+KK +      SY 
Sbjct: 687 RLSEAVVIINLMVQNGIVPEEV--NSIFEADKKEVAAPKIV-VEYLLKKSHI--TYYSYE 741

Query: 300 TLLNGL 305
            L +G+
Sbjct: 742 LLYDGI 747



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 138/337 (40%), Gaps = 42/337 (12%)

Query: 174 ALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-KNDGLKPDVYTYTAV 231
           AL++ +Q+    G K  ++TY C+++ L   G+ E   ++L  + KN   K     Y  +
Sbjct: 23  ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGI 82

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN----------------------- 268
           M  + + G+  EA+ +          P+V ++N + N                       
Sbjct: 83  MRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGI 142

Query: 269 ------------GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
                        +C  G P   + LL  M  + C  + +SY  +++G  K      A  
Sbjct: 143 YPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYH 202

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           +F EM++ G   D    N L+  LC     +K  ++++ ++F K+ K+    +  T+ I 
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVLC-----KKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I+ L +    DEA   L   +  G  P  I++N +I   C   K+ +A   L  M     
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            P+  +Y+ +I    +     +A  +   A+ +G IP
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIP 354


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 197/421 (46%), Gaps = 41/421 (9%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+  L        AV+   E  S    P++ T +++++  C  +   +AR++++ M 
Sbjct: 42  YTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEML 101

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G   N  T++ LV+ LCK  RL EA+ +++ M   GC P + TYN ++ G C   RV+
Sbjct: 102 HRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVD 161

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV------ 261
           EA+  +  +  +G  PD+ TYTA++ GFCK       +ELL E   RG TP++V      
Sbjct: 162 EAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVI 221

Query: 262 --------------------------TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
                                     T+N+L  GYC+ G   + + LL  M    C PD 
Sbjct: 222 DGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDV 281

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           ++Y+TL++   K G++  A  +F++MV      D     SL+ GLC +       +EDA 
Sbjct: 282 VTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR-----MEDAL 336

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++ E++T++       TY  V+    K  +  +A   +      G +P T+T+N ++   
Sbjct: 337 ELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGC 396

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL---EKSYDACALYGAALKQGVI 472
           C  G+ D+AL  L  +      P  TS  M    LD L    ++ DA   Y   +++G +
Sbjct: 397 CRAGRTDQALQYLDQLNSEGG-PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYV 455

Query: 473 P 473
           P
Sbjct: 456 P 456



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 197/389 (50%), Gaps = 10/389 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E + + +++ + G   +V  +N ++         + A  F  +  + G  P+  
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C   D     +++  +   G+ P++ T++ +++ LCK+GRL++A+++ ++M
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C P   TYN L+ G C  G ++EA  +L  + +D   PDV TYT +M  FCK+GR 
Sbjct: 241 ---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A EL  + +   ++P+VVTF +L +G C EG     + LL+ + +R C P   +Y+ +
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 357

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K  ++R A  +  +    GF  +    N L+ G C     ++     A Q  +++
Sbjct: 358 VDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ-----ALQYLDQL 412

Query: 362 TKK--VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
             +     T    Y I++  L +  +TD+A+      I+ G++P   TF  V+ ALC   
Sbjct: 413 NSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAH 472

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           +  +A  LL  M ++   P   + D +++
Sbjct: 473 QPQQAHELLEEMIKYGHTPGPGTCDAVVS 501



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 175/342 (51%), Gaps = 11/342 (3%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+  T++ ++          +A +V+  M    + P+ TT T++V SLC   R+ +A E+
Sbjct: 37  PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 96

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           +++M   G   N  TY+ L+ GLC   R++EA  ++  +   G  P V TY +++ GFC+
Sbjct: 97  VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCR 156

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R +EA   + + +  G  P+++T+  L  G+CK     +G+ LL  + +R   PD ++
Sbjct: 157 ARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVT 216

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           YST+++GL K G++R AV IF+EM      +     NSL+ G C         +++A ++
Sbjct: 217 YSTVIDGLCKAGRLRDAVDIFEEMSCAPTAI---TYNSLIGGYCRAGD-----MDEAIRL 268

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
             KM       D  TY  ++    K  + D+A       +     P  +TF +++  LCG
Sbjct: 269 LGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCG 328

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKS 456
           EG+++ AL LL  +      P+  +Y+ ++    K +Q+ K+
Sbjct: 329 EGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKA 370



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 162/332 (48%), Gaps = 13/332 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  +   +++   + + G    +  ++ ++  L        AV  F E S    AP + 
Sbjct: 191 KSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSC---APTAI 247

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  YC   D  EA +++  M D+   P+V T+T L+++ CK GRL +A E+  QM
Sbjct: 248 TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQM 307

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P++ T+  L+ GLC  GR+E+A E+L  +   G  P +YTY  V+DG+CK  + 
Sbjct: 308 VANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQV 367

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN--CLPDKISYS 299
            +A EL+ +   RG  PN VT+N L  G C+ G   + +  L  +      C      Y+
Sbjct: 368 RKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYA 427

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            +L+ L + G+   AV  ++EM++ G+        +++  LC     ++     A+++ E
Sbjct: 428 IILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQ-----AHELLE 482

Query: 360 KMTKKVSVTDPGTYGIVIRTL---GKGKKTDE 388
           +M K      PGT   V+      G  +K DE
Sbjct: 483 EMIKYGHTPGPGTCDAVVSAYCRAGMIQKADE 514



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 171/356 (48%), Gaps = 9/356 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P +   +++I   C       A  V   M D  + P+  T+T LV+ L K+ RL++A++V
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L +M      P+  T   +++ LC   RV++A E++  + + G+  +  TY+A++DG CK
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R +EA+ L+    ERG  P VVT+N++  G+C+     +  G ++ M    C PD I+
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+ L+ G  K   +   + +  E+ R GF  D    ++++ GLC         L DA  +
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGR-----LRDAVDI 236

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           FE+M+   +     TY  +I    +    DEA+  L   ++    P  +T+  ++ A C 
Sbjct: 237 FEEMSCAPTAI---TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCK 293

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            G++D A  L   M  +   P   ++  L+  L    +  DA  L     ++G  P
Sbjct: 294 MGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 349



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 136/297 (45%), Gaps = 40/297 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L++ +DIF+ +    T  +   +N L+       + + A++   +      AP+  
Sbjct: 226 KAGRLRDAVDIFEEMSCAPTAIT---YNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVV 282

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  +C      +A ++   M  N   P+V TFT LV+ LC  GR+++ALE+L+++
Sbjct: 283 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 342

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY------------- 228
            R GC P I TYNC++ G C   +V +A E++ + ++ G  P+  TY             
Sbjct: 343 TRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 402

Query: 229 ------------------------TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
                                     ++D  C+ GR+++A++   E I+RG  P   TF 
Sbjct: 403 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 462

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+    CK   P +   LL+ M K    P   +   +++   + G I+ A  +  E+
Sbjct: 463 TVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 102/253 (40%), Gaps = 41/253 (16%)

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + P    +  V+ G C+ GR   A+                                   
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHAL----------------------------------- 25

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           G+ + M   +  PD ++Y+ L++GL K  ++R AV + +EMV      D   +  +++ L
Sbjct: 26  GVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSL 84

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C+      D ++DA ++ E+M  +    +  TY  ++  L K ++ DEA+  +    E G
Sbjct: 85  CL-----GDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERG 139

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
             P  +T+N++I   C   ++D+A   +  M      P   +Y  LI    +        
Sbjct: 140 CAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGL 199

Query: 461 ALYGAALKQGVIP 473
            L G   ++G  P
Sbjct: 200 ELLGEVTRRGFTP 212



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 2/158 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG-LAPNS 120
           KA+ +++  ++    +  G   +   +N L+         + A+++  + +S G   P S
Sbjct: 363 KANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTS 422

Query: 121 WT-FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
              ++I++   C      +A +  + M   GY P   TF  +V +LCK+ + ++A E+L+
Sbjct: 423 VAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLE 482

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           +M + G  P   T + ++   C  G +++A E+   ++
Sbjct: 483 EMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 218/450 (48%), Gaps = 40/450 (8%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           D  +   ++E +++F+ +       SV  +N ++  LV       A K +      G+ P
Sbjct: 85  DYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYP 144

Query: 119 NSWTFSIMIRCYC-----------------------------------NKNDFFEARKVI 143
           + +T +I ++ +C                                    +N   EA  + 
Sbjct: 145 DVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLF 204

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M   G  P++ TF  L++ LCK G ++E+ ++  ++ + G  PN+ T+N  ++GLC  
Sbjct: 205 DEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRK 264

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G ++EA  +L ++ ++GL PDV +Y  ++ GFCK  +  EA   L++ +  GV PN  T+
Sbjct: 265 GAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTY 324

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           NT+ NG+CK G       +L+    +  +PD+ +YS+L+NGL   G +  A+++F E + 
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            GF+    + N+L++GL      ++ L+  A Q+ + M +     D  TY +V+  L K 
Sbjct: 385 KGFKHSIILYNTLVKGL-----SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
               +A   L+ AI  G IP   TFN +I   C +  +DKA+ +L  M  H   P   +Y
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + L+  L +  K  +    + A L++G  P
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 196/394 (49%), Gaps = 8/394 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   +FD + K G    +  FN L+  L      + + K FS+    G+ PN +TF+I I
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           +  C K    EA ++++ +   G  P+V ++  L+   CK  +L EA   L +M   G +
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  TYN ++ G C  G ++ A ++L +    G  PD +TY+++++G C  G  N AM +
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             EA+E+G   +++ +NTL  G  K+G  ++ + L+K M +  C PD  +Y+ ++NGL K
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G +  A  I  + +  G   D    N+L+ G C +   +K     A ++ + M      
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDK-----AIEILDTMLSHGIT 493

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  TY  ++  L K +K D  +      +E G  P  IT+N +I++ C + K+ +A+ L
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMEL 553

Query: 428 LFLMYEHAKIPSRTSYDMLITKL---DQLEKSYD 458
              M      P   +   LI  L    +L+K+Y+
Sbjct: 554 FKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 191/402 (47%), Gaps = 5/402 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + +++   G  ++   +  ++      N Q  A   F E    G+ P+  TF+ +I   C
Sbjct: 168 LLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLC 227

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            K +  E+ K+   +   G  PN+ TF I +  LC+ G + EA  +L+ +   G  P++ 
Sbjct: 228 KKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVI 287

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           +YN L+ G C   ++ EA   L  + N G++P+ +TY  +++GFCK G    A ++L +A
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           + +G  P+  T+++L NG C +G   + + +     ++      I Y+TL+ GL K G +
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLV 407

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ + K+M+  G   D    N ++ GLC     +   L DA  +      K  + D  
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLC-----KMGCLSDANGILNDAIAKGCIPDIF 462

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           T+  +I    K +  D+A+  L   +  G  P  IT+N ++  LC   K+D  +     M
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAM 522

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            E    P+  +Y++LI    +  K  +A  L+     +G+ P
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 183/388 (47%), Gaps = 6/388 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++         + A K   +A   G  P+ +T+S +I   CN  D   A  V     
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G+  ++  +  LV  L K G + +AL+++  M   GC P+I TYN ++ GLC +G + 
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +L +    G  PD++T+  ++DG+CK    ++A+E+L+  +  G+TP+V+T+NTL 
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG CK       V   K M ++ C P+ I+Y+ L+    K  K+  A+ +FKEM   G  
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT-DPGTYGIVIRTLGKGKKT 386
            D   + +L+ GLC         L+ AY++F  + K+   +     + I+I         
Sbjct: 564 PDIVTLCTLICGLCSNGE-----LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNV 618

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
             A    H        P   T+  +I + C  G ID A   L        +PS T+   +
Sbjct: 619 SMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKV 678

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +  L    +  +A  +    ++ G++P+
Sbjct: 679 LNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 193/429 (44%), Gaps = 50/429 (11%)

Query: 23  IPQFNKL--VVFAAASLSTAESLDLKENPRSLQAQRFVDRI------KASPLKERIDIFD 74
           I  FNKL  V+    ++  +E L  K   R +    F   I      +   + E   + +
Sbjct: 216 ILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLE 275

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           SI  +G    V  +N L+      ++   A  +  +  + G+ PN +T++ +I  +C   
Sbjct: 276 SIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAG 335

Query: 135 DFFEARKVI-DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
               A K++ D MF  G+ P+  T++ L+N LC  G +  A+ V  +    G K +I  Y
Sbjct: 336 MMQNADKILRDAMF-KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILY 394

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+KGL   G V +A +++ ++   G  PD++TY  V++G CK+G  ++A  +LN+AI 
Sbjct: 395 NTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIA 454

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           +G  P++ TFNTL +GYCK+    K + +L  M      PD I+Y+TLLNGL K  K+  
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDN 514

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
            V  FK M+  G                                           +  TY
Sbjct: 515 VVDTFKAMLEKG----------------------------------------CTPNIITY 534

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
            I+I +  K +K  EA+         G  P  +T   +I  LC  G++DKA  L   + +
Sbjct: 535 NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEK 594

Query: 434 HAKIPSRTS 442
             K    T+
Sbjct: 595 EYKFSYSTA 603



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 174/383 (45%), Gaps = 40/383 (10%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++R Y  K    EA  V + M      P+V ++  ++N L + G   +A +V  +M  IG
Sbjct: 82  IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ T+   +K  C  GR   A  +L N+   G + +  +Y AV+ GF K     EA 
Sbjct: 142 IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAY 201

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNC------------- 291
            L +E +++G+ P+++TFN L +  CK+G   +   L  K+MK+  C             
Sbjct: 202 HLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGL 261

Query: 292 ---------------------LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
                                 PD ISY+TL+ G  K  K+  A     +MV  G E +E
Sbjct: 262 CRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N+++ G C     +  ++++A ++      K  + D  TY  +I  L      + A+
Sbjct: 322 FTYNTIINGFC-----KAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              + A+E G     I +N +++ L  +G + +AL L+  M EH   P   +Y++++  L
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            ++    DA  +   A+ +G IP
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIP 459



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 129/276 (46%), Gaps = 1/276 (0%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +   + + G +  +  +N ++  L  +     A    ++A + G  P+ +TF+ +I
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             YC + +  +A +++D M  +G  P+V T+  L+N LCK+ +L   ++    M   GC 
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PNI TYN L++  C   +V EA E+   +K  GL PD+ T   ++ G C  G  ++A EL
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588

Query: 248 -LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
            +    E   + +   FN + N +C +        L   M   +C PD  +Y  +++   
Sbjct: 589 FVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYC 648

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           K G I  A +   E +  G          +L  LC+
Sbjct: 649 KTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCV 684



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 138/337 (40%), Gaps = 42/337 (12%)

Query: 174 ALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-KNDGLKPDVYTYTAV 231
           AL++ +Q+    G K  ++TY C+++ L   G+ E   ++L  + KN   K     Y  +
Sbjct: 23  ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGI 82

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN----------------------- 268
           M  + + G+  EA+ +          P+V ++N + N                       
Sbjct: 83  MRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGI 142

Query: 269 ------------GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
                        +C  G P   + LL  M  + C  + +SY  +++G  K      A  
Sbjct: 143 YPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYH 202

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           +F EM++ G   D    N L+  LC     +K  ++++ ++F K+ K+    +  T+ I 
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVLC-----KKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I+ L +    DEA   L   +  G  P  I++N +I   C   K+ +A   L  M     
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            P+  +Y+ +I    +     +A  +   A+ +G IP
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIP 354



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 115/246 (46%), Gaps = 8/246 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L   +D F ++ + G   ++  +N L+ +     +   A++ F E  + GL P+  
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT--FTILVNSLCKSGRLKEALEVLD 179
           T   +I   C+  +  +A ++     +  Y  + +T  F I++N+ C    +  A ++  
Sbjct: 568 TLCTLICGLCSNGELDKAYELF-VTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFH 626

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +MG   C P+  TY  ++   C  G ++ A+  L+   + GL P   T   V++  C   
Sbjct: 627 KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTH 686

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R +EA+ ++N  ++ G+ P  V  N++F    KE    K V +  L+KK +      SY 
Sbjct: 687 RLSEAVVIINLMVQNGIVPEEV--NSIFEADKKEVAAPKIV-VEYLLKKSHI--TYYSYE 741

Query: 300 TLLNGL 305
            L +G+
Sbjct: 742 LLYDGI 747


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 202/425 (47%), Gaps = 40/425 (9%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++ S +K    ++  + + G    V  FN L+ AL   ++  TAV    E SS G+AP+ 
Sbjct: 161 VEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDE 220

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+ +++ +  +     A +V   M + G  P   T  +L+N  CK GR+++AL  + Q
Sbjct: 221 TTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQ 280

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
               G +P+  TYN  + GLC  G V  A +++  +  +G  PDV+TY  V++  CK G+
Sbjct: 281 EIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 340

Query: 241 SNEAMELLNEAIERGVTPNVVTFNT----------------------------------- 265
             EA  +LN+ +ERG  P++ TFNT                                   
Sbjct: 341 LEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNI 400

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L N  CK G P   + L + MK   C PD+++Y+TL++ L   GK+  A+ + KEM   G
Sbjct: 401 LINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAG 460

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   N+++ GLC K       +E+A +VF++M  +    +  T+  +I  L K K+
Sbjct: 461 CPRSTVTYNTIIDGLCKKMR-----IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKR 515

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+A   +   I  G  P  IT+N+++   C +G I KA  +L  M  +       +Y  
Sbjct: 516 IDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGT 575

Query: 446 LITKL 450
           LI  L
Sbjct: 576 LINGL 580



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 187/385 (48%), Gaps = 5/385 (1%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N L+     L   E A+ +  +  + G  P+  T++  +   C       A KV+D M  
Sbjct: 259 NVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQ 318

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G+ P+V T+ I+VN LCK+G+L+EA  +L+QM   GC P+I T+N L+  LC   R+EE
Sbjct: 319 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEE 378

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A ++   V   GL PDVYT+  +++  CKVG    A+ L  E    G TP+ VT+NTL +
Sbjct: 379 ALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLID 438

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
             C  G   K + LLK M+   C    ++Y+T+++GL K  +I  A  +F +M   G   
Sbjct: 439 NLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 498

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +    N+L+ GLC     +   ++DA Q+  +M  +    +  TY  ++    K     +
Sbjct: 499 NAITFNTLIDGLC-----KDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKK 553

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   L      G     +T+  +I  LC  G+   AL LL  M       +  +Y+ +I 
Sbjct: 554 AADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQ 613

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L +   + DA  L+    + G  P
Sbjct: 614 SLFRRNNTRDAMNLFREMTEVGEPP 638



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 207/408 (50%), Gaps = 8/408 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   I + + + G    ++ FN L++AL   N  E A+    + +  GL+P+ +
Sbjct: 337 KNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVY 396

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I+I   C   D   A ++ + M  +G  P+  T+  L+++LC  G+L +AL++L +M
Sbjct: 397 TFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEM 456

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +  TYN ++ GLC   R+EEA E+   +   G+  +  T+  ++DG CK  R 
Sbjct: 457 ESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRI 516

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A +L+++ I  G+ PN +T+N++   YCK+G   K   +L+ M       D ++Y TL
Sbjct: 517 DDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTL 576

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K G+ + A+ + + M   G     +  N ++     +S   ++   DA  +F +M
Sbjct: 577 INGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVI-----QSLFRRNNTRDAMNLFREM 631

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKT-DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           T+     D  TY IV R L +G  +  EA   L   ++ G IP   +F  + + L   G 
Sbjct: 632 TEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGM 691

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
            D  +  + ++ E A +    S    I    ++ K YDA A +G  LK
Sbjct: 692 DDYFIRAIEIIIEKADLGD--SDVSAIRGYLKIRKFYDALATFGRLLK 737



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 186/382 (48%), Gaps = 6/382 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + D + ++G +  V  +N ++  L    + E A    ++    G  P+  TF+ +I  
Sbjct: 310 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVA 369

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C+ N   EA  +   +   G  P+V TF IL+N+LCK G  + AL + ++M   GC P+
Sbjct: 370 LCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPD 429

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L+  LC +G++ +A ++L  +++ G      TY  ++DG CK  R  EA E+ +
Sbjct: 430 EVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFD 489

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +   +G++ N +TFNTL +G CK+        L+  M      P+ I+Y+++L    K G
Sbjct: 490 QMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQG 549

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            I+ A  I + M   GFEVD     +L+ GLC     +      A ++   M  K     
Sbjct: 550 DIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQV-----ALKLLRGMRIKGMRAT 604

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC-GEGKIDKALLLL 428
           P  Y  VI++L +   T +A+       E+G  P   T+  V + LC G G I +A   L
Sbjct: 605 PKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFL 664

Query: 429 FLMYEHAKIPSRTSYDMLITKL 450
             M +   IP  +S+ ML   L
Sbjct: 665 LEMVDKGFIPEFSSFRMLAEGL 686



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 154/331 (46%), Gaps = 7/331 (2%)

Query: 127 IRCYCNKNDFFEARKVIDCMFDN--GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           +  Y  +  F +A  ++    D   G   +   +  L+N L +  ++K    V  +MG  
Sbjct: 120 LESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGER 179

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G KP++ T+N L+K LC   +V  A  ML  + + G+ PD  T+T +M GF + G    A
Sbjct: 180 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAA 239

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           + +    +E G +P  VT N L NGYCK G     +G ++        PD+I+Y+T +NG
Sbjct: 240 LRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNG 299

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L + G +  A+ +   MV+ G + D    N ++  LC         LE+A  +  +M ++
Sbjct: 300 LCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ-----LEEAKGILNQMVER 354

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             + D  T+  +I  L  G + +EAL         G  P   TFN +I ALC  G    A
Sbjct: 355 GCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLA 414

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
           L L   M      P   +Y+ LI  L  L K
Sbjct: 415 LRLFEEMKSSGCTPDEVTYNTLIDNLCSLGK 445



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 5/152 (3%)

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
           FG + D  + N LL  L   S  +  LLE    V+ +M ++    D  T+  +++ L + 
Sbjct: 144 FGIQADTVVYNHLLNVLVEGS--KMKLLE---TVYSEMGERGIKPDVVTFNTLMKALCRA 198

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            +   A++ L      G  P   TF  ++Q    EG I  AL +   M E    P++ + 
Sbjct: 199 HQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTV 258

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           ++LI    +L +  DA       +  G  P +
Sbjct: 259 NVLINGYCKLGRVEDALGYIQQEIANGFEPDQ 290


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 188/356 (52%), Gaps = 5/356 (1%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+++T++ +IR  C +     A  V++ MF  G  P+V T+TIL+ + CK    K+A+++
Sbjct: 164 PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKL 223

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           LD+M   GC P+I TYN +L G+C  GRVE+A E L N+ + G +P+  +Y  V+ G   
Sbjct: 224 LDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFT 283

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R  +A +L+ E   +G  PNVVTFN L +  C+ G     + +L+ M +  C P+ +S
Sbjct: 284 AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLS 343

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+ LL+   K  KI  A+   + MV  G   D    N+LL  LC ++ E    +E  +Q+
Sbjct: 344 YNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALC-RNGEVDVAIELLHQL 402

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            +K    V +    +Y  VI  L K  KT EAL  L      G  P  IT++ +   LC 
Sbjct: 403 KDKGCSPVLI----SYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCR 458

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           E +I++A+     + +    P+   Y+ ++  L +  ++++A  L+   +  G +P
Sbjct: 459 EDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMP 514



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 197/385 (51%), Gaps = 5/385 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L        A+    +    G  P+  T++I++   C ++ + +A K++D M 
Sbjct: 169 YNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH 228

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  P++ T+ +++N +C+ GR+++A+E L  +   GC+PN  +YN +LKGL    R E
Sbjct: 229 DKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWE 288

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A +++  + + G  P+V T+  ++   C+ G    AME+L +  + G TPN +++N L 
Sbjct: 289 DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLL 348

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           + +CK+    K +  ++LM  R C PD +SY+TLL  L + G++  A+ +  ++   G  
Sbjct: 349 HAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCS 408

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N+++ GL  K+ + K+ LE    + ++MT K    D  TY  +   L +  + +
Sbjct: 409 PVLISYNTVIDGL-TKAGKTKEALE----LLDEMTSKGLQPDIITYSTIASGLCREDRIE 463

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA+       +MG  P    +N ++  LC   +   A+ L   M     +P+ ++Y +L+
Sbjct: 464 EAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILV 523

Query: 448 TKLDQLEKSYDACALYGAALKQGVI 472
             L       +A  L+     +GV+
Sbjct: 524 EGLAYEGLVKEARELFAQLCSRGVV 548



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 169/328 (51%), Gaps = 5/328 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S  K+ + + D +   G    +  +N +L  +      E A++F     SYG  PN+ 
Sbjct: 213 KRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTV 272

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I+++       + +A K+++ M   G  PNV TF +L++ LC+ G ++ A+EVL+QM
Sbjct: 273 SYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQM 332

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC PN  +YN LL   C   ++ +A E +  + + G  PD+ +Y  ++   C+ G  
Sbjct: 333 PQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEV 392

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ELL++  ++G +P ++++NT+ +G  K G   + + LL  M  +   PD I+YST+
Sbjct: 393 DVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTI 452

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            +GL +  +I  AV  F ++   G      + N++L GLC +         +A  +F  M
Sbjct: 453 ASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRET-----HNAIDLFAYM 507

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                + +  TY I++  L       EA
Sbjct: 508 ISSGCMPNESTYTILVEGLAYEGLVKEA 535



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 188/394 (47%), Gaps = 19/394 (4%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS----WTFSIMIRCYCNKNDFFEA 139
           S +   + L  LV   E + A++     S  GL P S       + +I+  C      +A
Sbjct: 66  SSASATERLRVLVRRGELDDALRLVD--SLAGLNPPSPAAVGPCAALIKKLCASGRTADA 123

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
           R+V+         P+V  +  +V   C +G+L  A  ++  M     +P+  TYN L++G
Sbjct: 124 RRVL-----AASGPDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRG 175

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC  GR   A  +L ++   G  PDV TYT +++  CK     +AM+LL+E  ++G  P+
Sbjct: 176 LCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPD 235

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           +VT+N + NG C+EG     +  LK +    C P+ +SY+ +L GL    +   A  + +
Sbjct: 236 IVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLME 295

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM   G   +    N L+  LC      + L+E A +V E+M +     +  +Y  ++  
Sbjct: 296 EMAHKGCPPNVVTFNMLISFLC-----RRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHA 350

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
             K KK  +A+  +   +  G  P  +++N ++ ALC  G++D A+ LL  + +    P 
Sbjct: 351 FCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPV 410

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             SY+ +I  L +  K+ +A  L      +G+ P
Sbjct: 411 LISYNTVIDGLTKAGKTKEALELLDEMTSKGLQP 444



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 137/262 (52%), Gaps = 1/262 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + + +   G   +V  FN L+  L      E A++   +   YG  PNS +++ ++  +C
Sbjct: 293 LMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFC 352

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    +A + ++ M   G +P++ ++  L+ +LC++G +  A+E+L Q+   GC P + 
Sbjct: 353 KQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLI 412

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           +YN ++ GL   G+ +EA E+L  + + GL+PD+ TY+ +  G C+  R  EA+    + 
Sbjct: 413 SYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKV 472

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            + G+ P    +N +  G CK       + L   M    C+P++ +Y+ L+ GL   G +
Sbjct: 473 QDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLV 532

Query: 312 RPAVSIFKEMVRFGFEVDERMM 333
           + A  +F ++   G  V++++M
Sbjct: 533 KEARELFAQLCSRGV-VNKKLM 553


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 201/429 (46%), Gaps = 43/429 (10%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + +D+F  + +     +V DFN L  A+    + E  +    +  S G+A + +T SIMI
Sbjct: 71  DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
            C+C       A   +  +   GY P+   F  L+N LC   R+ EALE++D+M  +G K
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190

Query: 188 PNIQTYNCLLKGLCYVGRVEEAY-----------------------------------EM 212
           P + T N L+ GLC  G+V +A                                    E+
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  ++   +K D   Y+ ++DG CK G  + A  L NE   +G   +++T+NTL  G+C 
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G    G  LL+ M KR   P+ +++S L++  +K GK+R A  + KEM++ G   +   
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            NSL+ G C     +++ LE+A Q+ + M  K    D  T+ I+I    K  + D+ L  
Sbjct: 371 YNSLIDGFC-----KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL-- 450
                  G I  T+T+N ++Q  C  GK++ A  L   M      P   SY +L+  L  
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485

Query: 451 -DQLEKSYD 458
             +LEK+ +
Sbjct: 486 NGELEKALE 494



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 199/397 (50%), Gaps = 13/397 (3%)

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           +IK D   +S+     ++  L      + A   F+E    G   +  T++ +I  +CN  
Sbjct: 258 NIKLDAVKYSI-----IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
            + +  K++  M      PNV TF++L++S  K G+L+EA ++L +M + G  PN  TYN
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+ G C   R+EEA +M+  + + G  PD+ T+  +++G+CK  R ++ +EL  E   R
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           GV  N VT+NTL  G+C+ G       L + M  R   PD +SY  LL+GL   G++  A
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           + IF ++ +   E+D  +   ++ G+C  S      ++DA+ +F  +  K    D   Y 
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASK-----VDDAWDLFCSLPLKGVKLDARAYN 547

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
           I+I  L +     +A I      E GH P  +T+N +I+A  G+     A  L+  M   
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS 607

Query: 435 AKIPSRTSYDMLITKLD--QLEKSY-DACALYGAALK 468
                 ++  M+I  L   +L+KS+ D  +   A+LK
Sbjct: 608 GFPADVSTVKMVINMLSSGELDKSFLDMLSTTRASLK 644



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 207/410 (50%), Gaps = 9/410 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E +++ D + + G   ++   N L+  L +  +   AV         G  PN  T+  
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C       A +++  M +     +   ++I+++ LCK G L  A  + ++M   G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            K +I TYN L+ G C  GR ++  ++L ++    + P+V T++ ++D F K G+  EA 
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +LL E ++RG+ PN +T+N+L +G+CKE    + + ++ LM  + C PD ++++ L+NG 
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  +I   + +F+EM   G   +    N+L++G C     +   LE A ++F++M  + 
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC-----QSGKLEVAKKLFQEMVSRR 468

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKA 424
              D  +Y I++  L    + ++AL  +   IE   +   I  +  +I  +C   K+D A
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKAL-EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527

Query: 425 L-LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L   L  +  K+ +R +Y+++I++L + +    A  L+    ++G  P
Sbjct: 528 WDLFCSLPLKGVKLDAR-AYNIMISELCRKDSLSKADILFRKMTEEGHAP 576



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 173/366 (47%), Gaps = 8/366 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L    ++F+ ++  G    +  +N L+         +   K   +     ++PN  
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS++I  +  +    EA +++  M   G  PN  T+  L++  CK  RL+EA++++D M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P+I T+N L+ G C   R+++  E+   +   G+  +  TY  ++ GFC+ G+ 
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A +L  E + R V P++V++  L +G C  G   K + +   ++K     D   Y  +
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G+    K+  A  +F  +   G ++D R  N ++  LC      KD L  A  +F KM
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC-----RKDSLSKADILFRKM 569

Query: 362 TKKVSVTDPGTYGIVIRT-LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           T++    D  TY I+IR  LG    T  A   L   ++    P  ++   ++  +   G+
Sbjct: 570 TEEGHAPDELTYNILIRAHLGDDDATTAA--ELIEEMKSSGFPADVSTVKMVINMLSSGE 627

Query: 421 IDKALL 426
           +DK+ L
Sbjct: 628 LDKSFL 633



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 124/269 (46%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L+E   +   + + G   +   +N L+      N  E A++      S G  P+ 
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+I+I  YC  N   +  ++   M   G   N  T+  LV   C+SG+L+ A ++  +
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M     +P+I +Y  LL GLC  G +E+A E+   ++   ++ D+  Y  ++ G C   +
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK 523

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++A +L      +GV  +   +N + +  C++ +  K   L + M +    PD+++Y+ 
Sbjct: 524 VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNI 583

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           L+   L       A  + +EM   GF  D
Sbjct: 584 LIRAHLGDDDATTAAELIEEMKSSGFPAD 612



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 40/204 (19%)

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           ++++A++L  + I+    P V+ FN LF+   K       + L K M+ +       + S
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            ++N   +  K+  A S   ++++ G+E D  + N+LL GLC++                
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC--------------- 172

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
                                    +  EAL  +   +EMGH P  IT N ++  LC  G
Sbjct: 173 -------------------------RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207

Query: 420 KIDKALLLLFLMYEHAKIPSRTSY 443
           K+  A++L+  M E    P+  +Y
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTY 231



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/269 (20%), Positives = 110/269 (40%), Gaps = 5/269 (1%)

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           + ++A ++  ++      P V  +  +     K  +    + L  +   +G+  ++ T +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            + N +C+          +  + K    PD + ++TLLNGL    ++  A+ +   MV  
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G +     +N+L+ GLC+        + DA  + ++M +     +  TYG V+  + K  
Sbjct: 188 GHKPTLITLNTLVNGLCLNGK-----VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           +T  A+  L    E       + ++ +I  LC +G +D A  L   M          +Y+
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            LI       +  D   L    +K+ + P
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISP 331



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 29/190 (15%)

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMV------------RFGFEVDERMMNSLLRGLCMK 343
           +SY   L+  L   K   AV +F++M+            R    + +     L+  LC K
Sbjct: 54  LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALC-K 112

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
             E K +    Y                T  I+I    + +K   A   +   +++G+ P
Sbjct: 113 QMESKGIAHSIY----------------TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEP 156

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            T+ FN ++  LC E ++ +AL L+  M E    P+  + + L+  L    K  DA  L 
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216

Query: 464 GAALKQGVIP 473
              ++ G  P
Sbjct: 217 DRMVETGFQP 226


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 211/424 (49%), Gaps = 11/424 (2%)

Query: 55  QRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY 114
           QR  ++  +  L  ++     +   G   +V  FN ++       + ++A K        
Sbjct: 204 QRLCNKYNSVELASKV--LGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEK 261

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN +TF+I+I   C  N   EA+++++ M   G  PNV T++ ++N LCK G++ +A
Sbjct: 262 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDA 321

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            E+   M R  C PN+ T+N L+ GLC   R+EEA ++   ++  G  PD+ TY +++DG
Sbjct: 322 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 381

Query: 235 FCKVGRSNEAMELLNEAIERGVTP-NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
            CK  + +EA +L     E GV+  N VT++TLF+GY   G       +  ++  +   P
Sbjct: 382 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 441

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D  +Y++L+    K  +    V + +EM   GF      ++++L GL      E +  E 
Sbjct: 442 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGL-----FEGNHTER 496

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE---MGHIPRTITFNN 410
           A Q+F+ M  +    D   Y +V+  + +  K D+AL  L   I+       P +   + 
Sbjct: 497 AIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDA 556

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           ++++LC  GK D A  LL  M E     + +SY+ L++ L +L++  +A  ++ A +  G
Sbjct: 557 LVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAG 616

Query: 471 VIPQ 474
             P+
Sbjct: 617 PAPE 620



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 207/443 (46%), Gaps = 43/443 (9%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + +F    +     +V   N  L  L  LN ++ A+  F  A +    PN +T+ I+I
Sbjct: 5   ELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILI 64

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           R + +  D   A ++++ M  +G+  N    T L+  LC +GR+ EALE    M +  C 
Sbjct: 65  RGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCA 123

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++ TY  L+  LC  G+ +EA  ML  +   G  PD  T++ ++DG CK G   +A  +
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRV 183

Query: 248 LNEAIERGV------------------------------------TPNVVTFNTLFNGYC 271
           L + I+RG+                                    TP V+ FN + NG+C
Sbjct: 184 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           K         LL++M ++ C+P+  +++ L+ GL K  ++  A  + ++MV  G   +  
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVV 303

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             ++++ GLC +       ++DAY++F+ M ++    +  T+ I+I  L K K+ +EA  
Sbjct: 304 TYSTVINGLCKQGQ-----VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQ 358

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA-KIPSRTSYDMLITKL 450
             H   E G  P  IT+N++I  LC   ++D+A  L   + E      +  +Y  L    
Sbjct: 359 LYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGY 418

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
             L +  DAC ++   + +G  P
Sbjct: 419 AALGRMADACRIFSMLVDKGFSP 441



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 193/415 (46%), Gaps = 7/415 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L     + + + + G   +V  F  L+  L   N    A +   +    G +PN  
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVV 303

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I   C +    +A ++   M      PNV T  IL++ LCK+ R++EA ++  +M
Sbjct: 304 TYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 363

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK-PDVYTYTAVMDGFCKVGR 240
              GC P+I TYN L+ GLC   +V+EA+++   +   G+   +  TY+ +  G+  +GR
Sbjct: 364 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 423

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  + +  +++G +P++ T+ +L   YCK    ++ V L++ M  +   P   + S 
Sbjct: 424 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 483

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL--LEDAYQVF 358
           +L GL +      A+ +F  M   G   D  + N ++ G+   S  +K L  LE   QV 
Sbjct: 484 VLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLE---QVI 540

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           +K  +K + +      +V  +L +  KTD+A   LH   E G      ++N ++  L   
Sbjct: 541 DKRDRKFNPSSSAVDALV-ESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRL 599

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            + D+A  +   M      P  ++ +++I+ L    K  DA  L     K G  P
Sbjct: 600 QRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCP 654



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/305 (21%), Positives = 124/305 (40%), Gaps = 39/305 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWS-VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K+  + E   +F +I + G + +    ++ L      L     A + FS     G +P+ 
Sbjct: 384 KSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDL 443

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I  YC  +   E  ++++ M   G+ P V T + ++  L +    + A+++ D 
Sbjct: 444 ATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDS 503

Query: 181 MGRIGCKPNIQTYNCLLKG--------------------------------------LCY 202
           M   GC  +   YN +++G                                      LC 
Sbjct: 504 MAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 563

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           VG+ ++A ++L  +   G    V +Y  ++ G  ++ R +EA ++    +  G  P + T
Sbjct: 564 VGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 623

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
            N + +  C          L++ M K  C PD  + +TL+ G  K G+   A  + +EM 
Sbjct: 624 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT 683

Query: 323 RFGFE 327
             G E
Sbjct: 684 EAGLE 688



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 3/220 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V+  + +L  L   N  E A++ F   ++ G   ++  +++++      +   +A  V++
Sbjct: 478 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLE 537

Query: 145 CMFDN---GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
            + D     ++P+ +    LV SLC+ G+  +A ++L +M   G    + +YN LL GL 
Sbjct: 538 QVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLS 597

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
            + R +EA ++   + + G  P++ T   V+   C   + ++A EL+    + G  P++ 
Sbjct: 598 RLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIE 657

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           T NTL  GYCK G       LL+ M +    P+  ++  L
Sbjct: 658 TCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 3/200 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA---SSYGLAPNSWTFSIM 126
           I +FDS+   G       +N ++  +   ++ + A+    +          P+S     +
Sbjct: 498 IQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDAL 557

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +   C      +A++++  M + G+   V+++  L++ L +  R  EA +V + M   G 
Sbjct: 558 VESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGP 617

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P I T N ++  LC   +V++AYE++  +   G  PD+ T   ++ G+CK GR++ A +
Sbjct: 618 APEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARK 677

Query: 247 LLNEAIERGVTPNVVTFNTL 266
           LL E  E G+ PN  T + L
Sbjct: 678 LLEEMTEAGLEPNDTTHDLL 697


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 223/489 (45%), Gaps = 44/489 (8%)

Query: 21  NKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDG 80
           +K   F +L +  AASL + ++ +          + F +      +KE I++   +   G
Sbjct: 106 SKFRHFTRLYIACAASLISNKNFEKAHEVMQCMVKSFAE---IGRVKEAIEMVIEMHNQG 162

Query: 81  TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEAR 140
              S    N ++  +  +   E A   F E  + G+ PN  ++ +M+  YC   +  E+ 
Sbjct: 163 LAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESD 222

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           + +  M + G+  +  T +++V   C+ G +  AL    +   +G +PN+  + C+++GL
Sbjct: 223 RWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGL 282

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG--------------------- 239
           C  G V++A+EML  +   G KP+VYT+TA++DG CK G                     
Sbjct: 283 CKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPN 342

Query: 240 ---------------RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
                          + N A  LL+   E+G+ PN  T+ TL +G+CK G   +   L+ 
Sbjct: 343 VLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMN 402

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           +M +    P+  +Y+ +++GL K G+++ A  + K   R G + D+     L+   C ++
Sbjct: 403 VMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQA 462

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
                 ++ A  +F KM K     D  +Y  +I    + K+  E+ +    A+  G +P 
Sbjct: 463 E-----IKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPT 517

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
             T+ ++I   C EG +  AL     M +H       +Y  LI+ L +  K  +A  LY 
Sbjct: 518 NKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYD 577

Query: 465 AALKQGVIP 473
           A +++G+ P
Sbjct: 578 AMIEKGLTP 586



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 158/338 (46%), Gaps = 11/338 (3%)

Query: 87  DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA-RKVIDC 145
           +F  ++  L      + A +   E    G  PN +T + +I   C K    +A R  +  
Sbjct: 274 NFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 333

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           +    + PNV T+T +++  C+  ++  A  +L +M   G  PN  TY  L+ G C  G 
Sbjct: 334 VRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGN 393

Query: 206 VEEAYEMLMNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            E AYE LMNV N+ G  P+V TY A++DG CK GR  EA ++L      G+  + VT+ 
Sbjct: 394 FERAYE-LMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYT 452

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L + +CK+    + + L   M K    PD  SY+TL+    +  +++ +   F+E VRF
Sbjct: 453 ILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRF 512

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G     +   S++ G C      +  L  A + F +M+     +D  TYG +I  L K  
Sbjct: 513 GLVPTNKTYTSMICGYC-----REGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQS 567

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           K DEA       IE G  P  +T   +    C   KID
Sbjct: 568 KLDEARCLYDAMIEKGLTPCEVTRVTLAYEYC---KID 602



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 141/292 (48%), Gaps = 8/292 (2%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
             S     GLAPN+ T++ +I  +C   +F  A ++++ M + G+ PNV T+  +V+ LC
Sbjct: 365 LLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLC 424

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K GR++EA +VL    R G   +  TY  L+   C    +++A  +   +   G++PD++
Sbjct: 425 KKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIH 484

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           +YT ++  FC+  R  E+     EA+  G+ P   T+ ++  GYC+EG     +     M
Sbjct: 485 SYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRM 544

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
               C  D I+Y  L++GL K  K+  A  ++  M+  G    E    +L    C     
Sbjct: 545 SDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYC----- 599

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           + D    A  V E++ KK+ V    T   ++R L   +K   A +  H  ++
Sbjct: 600 KIDDGCSAMVVLERLEKKLWVR---TVNTLVRKLCSERKVGMAALFFHKLLD 648



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 128/270 (47%), Gaps = 3/270 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +   +K+ G   + + +  L+         E A +  +  +  G +PN  T++ ++   C
Sbjct: 365 LLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLC 424

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            K    EA KV+   F NG   +  T+TIL++  CK   +K+AL + ++M + G +P+I 
Sbjct: 425 KKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIH 484

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           +Y  L+   C   R++E+          GL P   TYT+++ G+C+ G    A++  +  
Sbjct: 485 SYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRM 544

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            + G   + +T+  L +G CK+    +   L   M ++   P +++  TL     ++ KI
Sbjct: 545 SDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTL---AYEYCKI 601

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
               S    + R   ++  R +N+L+R LC
Sbjct: 602 DDGCSAMVVLERLEKKLWVRTVNTLVRKLC 631



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 112/228 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA   +   ++ + + ++G + +V  +N ++  L      + A K        GL  +  
Sbjct: 390 KAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKV 449

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I  +C + +  +A  + + M  +G  P++ ++T L+   C+  R+KE+    ++ 
Sbjct: 450 TYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEA 509

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  P  +TY  ++ G C  G +  A +    + + G   D  TY A++ G CK  + 
Sbjct: 510 VRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKL 569

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           +EA  L +  IE+G+TP  VT  TL   YCK       + +L+ ++K+
Sbjct: 570 DEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKK 617



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 42/227 (18%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           +  K + +K+ + +F+ + K G    +  +  L+         + +  FF EA  +GL P
Sbjct: 457 EHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVP 516

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
            + T++ MI  YC + +   A K    M D+G   +  T+  L++ LCK  +L EA  + 
Sbjct: 517 TNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLY 576

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D M   G  P            C V RV  AYE                       +CK+
Sbjct: 577 DAMIEKGLTP------------CEVTRVTLAYE-----------------------YCKI 601

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
                AM +L E +E+ +   V T NTL    C E    + VG+  L
Sbjct: 602 DDGCSAMVVL-ERLEKKLW--VRTVNTLVRKLCSE----RKVGMAAL 641


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 203/431 (47%), Gaps = 40/431 (9%)

Query: 55  QRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY 114
           +R  + I    + E ID+F+S+ +     S+ DF+ L  A+    E +  + F  E    
Sbjct: 39  ERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLN 98

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+  N +T +IMI C+C K     A  V+      G+ PN  TF+ L+N  C  GR+ EA
Sbjct: 99  GIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEA 158

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE-------------------------- 208
           + ++D+M  +  +PN+ T N L+ GLC  GRV E                          
Sbjct: 159 VALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNR 218

Query: 209 ---------AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
                    A ++   ++   +K  V  Y+ V+D  CK G  ++A+ L NE   +G+  +
Sbjct: 219 MCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKAD 278

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VV ++++  G C +G    G  +L+ M  RN +P+ +++S L++  +K GK+  A  ++ 
Sbjct: 279 VVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYN 338

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EMV  G   D    +SL+ G C     +++ L +A Q+ + M  K    +  TY I+I +
Sbjct: 339 EMVARGIAPDTITYSSLIDGFC-----KENRLGEANQMLDLMVSKGCEPNIVTYSILINS 393

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
             K K+ D  +         G +  T+T+N ++Q  C  GK++ A  L   M      PS
Sbjct: 394 YCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPS 453

Query: 440 RTSYDMLITKL 450
             +Y +L+  L
Sbjct: 454 VVTYGILLDGL 464



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 182/382 (47%), Gaps = 5/382 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D + K G   +   +  +L  +        A+  F +     +  +   +SI
Sbjct: 190 VTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSI 249

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C   +  +A  + + M   G   +V  ++ ++  LC  GR  +  ++L +M    
Sbjct: 250 VIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRN 309

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ T++ L+      G++ EA E+   +   G+ PD  TY++++DGFCK  R  EA 
Sbjct: 310 IIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEAN 369

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++L+  + +G  PN+VT++ L N YCK      G+ L   +  +  + D ++Y+TL+ G 
Sbjct: 370 QMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGF 429

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + GK+  A  +F+EMV  G          LL GLC     +   L+ A ++FEKM K  
Sbjct: 430 CQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLC-----DNGELQKALEIFEKMQKSR 484

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            +   G Y I+I  +    K D+A          G  P  +T+N +I  LC +G + +A 
Sbjct: 485 MILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEAD 544

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
           +L   M E    PS  +Y++LI
Sbjct: 545 MLFRKMKEDGCAPSDCTYNILI 566



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 193/412 (46%), Gaps = 20/412 (4%)

Query: 24  PQFNKLVVFAAASLSTAESLDL--KENPRSLQAQRF-----VDRI-KASPLKERIDIFDS 75
           P  N++      S +TA +LDL  K   RS++A        +D + K   L + + +F+ 
Sbjct: 214 PVLNRM----CKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNE 269

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++  G    V  ++ ++  L      +   K   E     + PN  TFS +I  +  +  
Sbjct: 270 MEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA+++ + M   G  P+  T++ L++  CK  RL EA ++LD M   GC+PNI TY+ 
Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSI 389

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+   C   RV+    +   + + GL  D  TY  ++ GFC+ G+ N A EL  E + RG
Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           V P+VVT+  L +G C  G   K + + + M+K   +     Y+ +++G+    K+  A 
Sbjct: 450 VPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAW 509

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           S+F  +   G + D    N ++ GLC K S  E D+L      F KM +        TY 
Sbjct: 510 SLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADML------FRKMKEDGCAPSDCTYN 563

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           I+IR    G     + + L   ++M       +   ++  +  +G++DK  L
Sbjct: 564 ILIRAHLGGSGVISS-VELIEEMKMRGFAADASTIKMVVVMLSDGRLDKTFL 614



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 192/409 (46%), Gaps = 5/409 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D + +     +V   N L+  L +      A+        YG   N  T+  
Sbjct: 155 VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGP 214

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C   +   A  +   M +     +V  ++I+++SLCK G L +AL + ++M   G
Sbjct: 215 VLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKG 274

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            K ++  Y+ ++ GLC  GR ++  +ML  +    + P+V T++A++D F K G+  EA 
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAK 334

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           EL NE + RG+ P+ +T+++L +G+CKE    +   +L LM  + C P+ ++YS L+N  
Sbjct: 335 ELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSY 394

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++   + +F E+   G   D    N+L++G C     +   L  A ++F++M  + 
Sbjct: 395 CKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFC-----QSGKLNVAKELFQEMVSRG 449

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
                 TYGI++  L    +  +AL       +   I     +N +I  +C   K+D A 
Sbjct: 450 VPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAW 509

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            L   +      P   +Y+++I  L +     +A  L+    + G  P 
Sbjct: 510 SLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPS 558



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 193/390 (49%), Gaps = 7/390 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D+F  +++     SV  ++ ++ +L      + A+  F+E    G+  +   +S +I  
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            CN   + +  K++  M      PNV TF+ L++   K G+L EA E+ ++M   G  P+
Sbjct: 289 LCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPD 348

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TY+ L+ G C   R+ EA +ML  + + G +P++ TY+ +++ +CK  R +  M L  
Sbjct: 349 TITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFC 408

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E   +G+  + VT+NTL  G+C+ G       L + M  R   P  ++Y  LL+GL   G
Sbjct: 409 EISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 468

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           +++ A+ IF++M +    +   + N ++ G+C  S      ++DA+ +F  ++ K    D
Sbjct: 469 ELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASK-----VDDAWSLFCSLSVKGVKPD 523

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY ++I  L K     EA +      E G  P   T+N +I+A  G   +  ++ L+ 
Sbjct: 524 VLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIE 583

Query: 430 LMYEHAKIPSRTSYDMLITKLD--QLEKSY 457
            M         ++  M++  L   +L+K++
Sbjct: 584 EMKMRGFAADASTIKMVVVMLSDGRLDKTF 613



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 126/300 (42%), Gaps = 32/300 (10%)

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +V EA ++  ++      P +  ++ +     +    +  +    E    G+  N+ T N
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            + N +C++   +    ++    K    P+ I++STL+NG    G++  AV++   MV  
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 325 GFEVDERMMNSLLRGLCMKS-WEEKDLLED-----------------------------A 354
            +  +   +N+L+ GLC+K    E  +L D                             A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQ 413
             +F KM ++        Y IVI +L K    D+AL  L + +EM  I    + ++++I 
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDAL-SLFNEMEMKGIKADVVAYSSIIG 287

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            LC +G+ D    +L  M     IP+  ++  LI    +  K  +A  LY   + +G+ P
Sbjct: 288 GLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP 347


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 199/406 (49%), Gaps = 7/406 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D + K G +   + +N LL+     +    A + F E  S G+ P+  +FS +I    
Sbjct: 346 VLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLS 405

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A K    M + G  P+   +TIL+   C++G + EAL+V D+M   GC  ++ 
Sbjct: 406 KNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVV 465

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN +L GLC    + EA E+   +   G+ PD YT+T +++G+ K G  N+A+ L    
Sbjct: 466 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 525

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVG-LLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
           I+R + P+VVT+NTL +G+CK G+ M+ V  L   M  R   P+ ISY  L+NG    G 
Sbjct: 526 IQRNLKPDVVTYNTLIDGFCK-GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 584

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A  ++ EMV  GFE      N++++G C      K     A +    M  K  V D 
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK-----ADEFLSNMLLKGIVPDG 639

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I    K +  D A   ++     G +P  IT+N ++     +G++ +A L++  
Sbjct: 640 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 699

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           M E    P R++Y  LI          +A  ++   L++G +P  K
Sbjct: 700 MIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 745



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 199/438 (45%), Gaps = 40/438 (9%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I+  + + G   +V   N ++ AL    + E    F S+    G+ P+  T++ +I  Y
Sbjct: 240 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 299

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +    EA +++D M   G  P V T+  ++N LCK+G+   A  VLD+M +IG  P+ 
Sbjct: 300 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359

Query: 191 QTYNCLLKGLCYV-----------------------------------GRVEEAYEMLMN 215
            TYN LL   C                                     G +++A +   +
Sbjct: 360 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 419

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +KN GL PD   YT ++ GFC+ G  +EA+++ +E +E+G   +VVT+NT+ NG CKE  
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   L   M +R   PD  +++TL+NG  K G +  AV++F+ M++   + D    N+
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+ G C  S  EK       +++  M  +    +  +YGI+I          EA      
Sbjct: 540 LIDGFCKGSEMEK-----VNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 594

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
            +E G     IT N +++  C  G   KA   L  M     +P   +Y+ LI    + E 
Sbjct: 595 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 654

Query: 456 SYDACALYGAALKQGVIP 473
              A AL       G++P
Sbjct: 655 MDRAFALVNKMENSGLLP 672



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 195/410 (47%), Gaps = 5/410 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++A  L+E  + F  +K  G   S++  N LL  LV +   + A + + E    G+  N 
Sbjct: 195 VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNV 254

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T +IMI   C        +  +  M + G  P+V T+  L+N+ C+ G L+EA E++D 
Sbjct: 255 YTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS 314

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G KP + TYN ++ GLC  G+   A  +L  +   G+ PD  TY  ++   C+   
Sbjct: 315 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 374

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  + +E   +GV P++V+F+ L     K G   + +   + MK     PD + Y+ 
Sbjct: 375 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 434

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+ G  + G +  A+ +  EM+  G  +D    N++L GLC     ++ +L +A ++F +
Sbjct: 435 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLC-----KEKMLSEADELFTE 489

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           MT++    D  T+  +I    K    ++A+      I+    P  +T+N +I   C   +
Sbjct: 490 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 549

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           ++K   L   M      P+  SY +LI     +    +A  L+   +++G
Sbjct: 550 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 599



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 152/304 (50%), Gaps = 5/304 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D + + G    V  +N +L  L        A + F+E +  G+ P+ +TF+ 
Sbjct: 445 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 504

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  Y    +  +A  + + M      P+V T+  L++  CK   +++  E+ + M    
Sbjct: 505 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 564

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  +Y  L+ G C +G V EA+ +   +   G +  + T   ++ G+C+ G + +A 
Sbjct: 565 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 624

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E L+  + +G+ P+ +T+NTL NG+ KE    +   L+  M+    LPD I+Y+ +LNG 
Sbjct: 625 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 684

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G+++ A  I  +M+  G   D     SL+ G        ++ L++A++V ++M ++ 
Sbjct: 685 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLING-----HVTQNNLKEAFRVHDEMLQRG 739

Query: 366 SVTD 369
            V D
Sbjct: 740 FVPD 743



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 152/320 (47%), Gaps = 5/320 (1%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N   F +LV +  ++ +L+E  E    +   G   +I   N LL GL  VG V+ A+E+ 
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             V   G++ +VYT   +++  CK  +       L++  E+GV P+VVT+NTL N YC++
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +   L+  M  +   P   +Y+ ++NGL K GK   A  +  EM++ G   D    
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 362

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           N LL   C       D + DA ++F++M  +  V D  ++  +I  L K    D+AL + 
Sbjct: 363 NILLVECC-----RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 417

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
                 G  P  + +  +I   C  G + +AL +   M E   +    +Y+ ++  L + 
Sbjct: 418 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKE 477

Query: 454 EKSYDACALYGAALKQGVIP 473
           +   +A  L+    ++GV P
Sbjct: 478 KMLSEADELFTEMTERGVFP 497



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 159/371 (42%), Gaps = 41/371 (11%)

Query: 113 SYG-LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           +YG    N   F +++R Y       E  +    +   G   ++     L+  L K G +
Sbjct: 176 TYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWV 235

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
             A E+  ++ R G + N+ T N ++  LC   ++E     L +++  G+ PDV TY  +
Sbjct: 236 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 295

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK--- 288
           ++ +C+ G   EA EL++    +G+ P V T+N + NG CK G  ++  G+L  M K   
Sbjct: 296 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 355

Query: 289 --------------------------------RNCLPDKISYSTLLNGLLKWGKIRPAVS 316
                                           +  +PD +S+S L+  L K G +  A+ 
Sbjct: 356 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 415

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
            F++M   G   D  +   L+ G C        ++ +A +V ++M ++  V D  TY  +
Sbjct: 416 YFRDMKNAGLAPDNVIYTILIGGFC-----RNGVMSEALKVRDEMLEQGCVLDVVTYNTI 470

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +  L K K   EA        E G  P   TF  +I     +G ++KA+ L  +M +   
Sbjct: 471 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 530

Query: 437 IPSRTSYDMLI 447
            P   +Y+ LI
Sbjct: 531 KPDVVTYNTLI 541



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 132/270 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E  ++F  + + G       F  L+           AV  F       L P+  
Sbjct: 476 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 535

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C  ++  +  ++ + M     +PN  ++ IL+N  C  G + EA  + D+M
Sbjct: 536 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 595

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +  I T N ++KG C  G   +A E L N+   G+ PD  TY  +++GF K    
Sbjct: 596 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 655

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A  L+N+    G+ P+V+T+N + NG+ ++G   +   ++  M +R   PD+ +Y++L
Sbjct: 656 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 715

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           +NG +    ++ A  +  EM++ GF  D++
Sbjct: 716 INGHVTQNNLKEAFRVHDEMLQRGFVPDDK 745


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 201/389 (51%), Gaps = 8/389 (2%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N ++       + + A +  +E     + P+++T++ +IR  C +     A  V+D
Sbjct: 126 VMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLD 182

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M      P+V T+TIL+ + CK    K+A+++LD+M   GC P+I TYN ++ G+C  G
Sbjct: 183 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 242

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           RV++A E L N+ + G +P+  +Y  V+ G C   R  +A EL+ E  ++G  PNVVTFN
Sbjct: 243 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 302

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +  C++G     + +L+ + K  C P+ +SY+ LL+   K  K+  A++    MV  
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 362

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D    N+LL  LC +S E    +E  +Q+ +K    V +    +Y  VI  L K  
Sbjct: 363 GCYPDIVSYNTLLTALC-RSGEVDVAVELLHQLKDKGCAPVLI----SYNTVIDGLTKAG 417

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           KT EAL  L+  +  G  P  IT++ +   LC E +I+ A+     + +    P+   Y+
Sbjct: 418 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 477

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            +I  L +  +++ A  L+   +  G +P
Sbjct: 478 AIILGLCKRRETHSAIDLFAYMIGNGCMP 506



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 187/363 (51%), Gaps = 5/363 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L        A+    E       P+  T++I++   C ++ + +A K++D M 
Sbjct: 161 YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 220

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  P++ T+ ++VN +C+ GR+ +A+E L  +   GC+PN  +YN +LKGLC   R E
Sbjct: 221 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 280

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A E++  +   G  P+V T+  ++   C+ G    A+E+L +  + G TPN +++N L 
Sbjct: 281 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 340

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           + +CK+    K +  L LM  R C PD +SY+TLL  L + G++  AV +  ++   G  
Sbjct: 341 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 400

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N+++ GL  K+ + K+ LE    +  +M  K    D  TY  +   L +  + +
Sbjct: 401 PVLISYNTVIDGL-TKAGKTKEALE----LLNEMVSKGLQPDIITYSTIAAGLCREDRIE 455

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A+       +MG  P T+ +N +I  LC   +   A+ L   M  +  +P+ ++Y +LI
Sbjct: 456 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515

Query: 448 TKL 450
             L
Sbjct: 516 EGL 518



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 188/385 (48%), Gaps = 17/385 (4%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
            D L +LV   E + A++    A      P++ T + +I+         EAR+V+     
Sbjct: 69  GDRLRSLVRRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVL----- 119

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
               P+V  +  +V   C +G+L  A  ++ +M     +P+  TYN L++GLC  GR   
Sbjct: 120 AACGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTAN 176

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +L  +      PDV TYT +++  CK     +AM+LL+E  ++G TP++VT+N + N
Sbjct: 177 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 236

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G C+EG     +  LK +    C P+ +SY+ +L GL    +   A  +  EM + G   
Sbjct: 237 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 296

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +    N L+  LC      K L+E A +V E++ K     +  +Y  ++    K KK D+
Sbjct: 297 NVVTFNMLISFLC-----RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDK 351

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A+  L   +  G  P  +++N ++ ALC  G++D A+ LL  + +    P   SY+ +I 
Sbjct: 352 AMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 411

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L +  K+ +A  L    + +G+ P
Sbjct: 412 GLTKAGKTKEALELLNEMVSKGLQP 436



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 177/354 (50%), Gaps = 5/354 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S  K+ + + D ++  G    +  +N ++  +      + A++F     SYG  PN+ 
Sbjct: 205 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 264

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I+++  C    + +A +++  M   G  PNV TF +L++ LC+ G ++ ALEVL+Q+
Sbjct: 265 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 324

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC PN  +YN LL   C   ++++A   L  + + G  PD+ +Y  ++   C+ G  
Sbjct: 325 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 384

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ELL++  ++G  P ++++NT+ +G  K G   + + LL  M  +   PD I+YST+
Sbjct: 385 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 444

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
             GL +  +I  A+  F ++   G   +  + N+++ GLC +          A  +F  M
Sbjct: 445 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS-----AIDLFAYM 499

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
                + +  TY I+I  L       EA   L      G + +++     I+ L
Sbjct: 500 IGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAIRLL 553


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 204/416 (49%), Gaps = 17/416 (4%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  ++F  +K  G    V  +  L+    +  + E A   F+E    G+ P+  T S++I
Sbjct: 320 EARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 379

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C K    EA K+++ +   G  P+V T T LV  LC   R+ +A ++  +M ++GC 
Sbjct: 380 DMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCM 439

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND------GLKPDVYTYTAVMDGFCKVGRS 241
           PN+ T   L+KGLC  G ++ A E+  N+ +D        KP+  +Y+ ++DG CK GR 
Sbjct: 440 PNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRE 499

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA EL  E    GV P+V+++ +L +G+C+ G       L   M      PD  ++S L
Sbjct: 500 DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVL 559

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K GK+  A  + + M++ G   +     +L++GLCM      D + +A Q+F KM
Sbjct: 560 IDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMN-----DRISEATQLFMKM 614

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEAL-IHLHHAIEMGHI-----PRTITFNNVIQAL 415
            K   + D  TYG +++ L +      AL +H     + G       P  I+++ +I  L
Sbjct: 615 QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGL 674

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           C  G+ D+A  L   M     IP+  SY  LI    +  K  DA  L+   + QGV
Sbjct: 675 CKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGV 730



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 190/411 (46%), Gaps = 62/411 (15%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+ P+  T  ++I  +C +    EA ++++ M   G   ++ T++ L+  LC   R+ EA
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV---------------------------- 206
            ++   M ++GC+P+   Y  L+KGLC  G++                            
Sbjct: 65  TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124

Query: 207 -------------EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
                        +EA E+   +K  G+ PDV +YT+++ GFC+ G+  +A  L NE ++
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
            G+  +V T + L +  CKEG  ++   LL++M +R C+ D ++YSTL+ GL    +I  
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISE 244

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A  +F  M + G   D     +L++GLC     +   +  A Q+ ++M     + D G Y
Sbjct: 245 ATRLFMSMQKLGCRPDAIAYGTLMKGLC-----QTGNINTALQLHQEM-----LNDTGRY 294

Query: 374 G-----------IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           G           I+I  L K ++ DEA          G +P  I++  +I   C  GK +
Sbjct: 295 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWE 354

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           KA  L   M +    P  T+  +LI  L +  K  +A  L    +++G IP
Sbjct: 355 KAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIP 405



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 193/409 (47%), Gaps = 23/409 (5%)

Query: 61  IKASPLKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE----AS 112
           IK   +K RI     +F S++K G       +  L+  L       TA++   E      
Sbjct: 233 IKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTG 292

Query: 113 SYGLA--PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR 170
            YG+   P   ++SI+I   C      EAR++   M   G  P+V ++T L++  C SG+
Sbjct: 293 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGK 352

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
            ++A  + ++M  +G +P++ T + L+  LC  G+V EA ++L  V   G  PDV T T 
Sbjct: 353 WEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTT 412

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR- 289
           ++ G C   R ++A +L  +  + G  PNVVT  TL  G C+ G     + L K M    
Sbjct: 413 LVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDT 472

Query: 290 -----NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
                NC P+ ISYS +++GL K G+   A  +FKEM   G   D     SL+ G C   
Sbjct: 473 SPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSG 532

Query: 345 -WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
            W+      DA  +F +M       D  T+ ++I  L K  K  EA   L   I+ G IP
Sbjct: 533 KWK------DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 586

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            T+T+  +++ LC   +I +A  L   M +   +P   +Y  L+  L Q
Sbjct: 587 NTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 635



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 197/385 (51%), Gaps = 17/385 (4%)

Query: 101 QETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           ++ A + F E  + G+ P+  +++ +I  +C    + +A+ + + M D G   +VTT ++
Sbjct: 137 EDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSM 196

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L++ LCK G++ EA E+L+ M + GC  +I TY+ L+KGLC   R+ EA  + M+++  G
Sbjct: 197 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLG 256

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAM----ELLNEAIERGV--TPNVVTFNTLFNGYCKEG 274
            +PD   Y  +M G C+ G  N A+    E+LN+    G+   P +++++ + +G CK+ 
Sbjct: 257 CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 316

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              +   L K MK +  +PD ISY+TL++G    GK   A  +F EM+  G + D    +
Sbjct: 317 REDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSS 376

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            L+  LC     +K  + +A ++ E + ++  + D  T   +++ L    +  +A     
Sbjct: 377 VLIDMLC-----KKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFL 431

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM------YEHAKIPSRTSYDMLIT 448
              ++G +P  +T   +++ LC  G I  AL L   M      Y     P+  SY ++I 
Sbjct: 432 KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIID 491

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L +  +  +A  L+      GVIP
Sbjct: 492 GLCKCGREDEARELFKEMKALGVIP 516



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 153/271 (56%), Gaps = 6/271 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ ++  L     ++ A + F E  + G+ P+  +++ +I  +C    + +A+ + + M 
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 545

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  P+VTTF++L++ LCK G++ EA E+L+ M + GC PN  TY  L+KGLC   R+ 
Sbjct: 546 DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRIS 605

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL----LNEAIERGVT--PNVV 261
           EA ++ M ++  G  PDV TY  +M G C+ G    A+EL    L++  + G    P+V+
Sbjct: 606 EATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVI 665

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           +++ + +G CK G   +   L K MK    +P+ ISY++L++G  + GK+  A  +F EM
Sbjct: 666 SYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEM 725

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           V  G +++    + ++ G C +   +K L +
Sbjct: 726 VDQGVQLNAVTYSVMIHGFCKEGQIDKALFQ 756



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 214/446 (47%), Gaps = 18/446 (4%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E LD+        +   +D + K   + E  ++ + + + G    +  ++ L+  L M +
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF-DNGYH-----P 153
               A + F      G  P++  +  +++  C   +   A ++   M  D G +     P
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
            + +++I+++ LCK  R  EA E+  +M   G  P++ +Y  L+ G C  G+ E+A  + 
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             + + G++PDV T + ++D  CK G+  EA +LL   I+RG  P+VVT  TL  G C +
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMK 420

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR----FGFEVD 329
               K   L   M+K  C+P+ ++ +TL+ GL + G I+ A+ + K M+     +G    
Sbjct: 421 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 480

Query: 330 ERMMNS--LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
              ++   ++ GLC    E     ++A ++F++M     + D  +Y  +I    +  K  
Sbjct: 481 PNAISYSIIIDGLCKCGRE-----DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 535

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A    +  +++G  P   TF+ +I  LC EGK+ +A  LL +M +   IP+  +Y  L+
Sbjct: 536 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 595

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L   ++  +A  L+    K G +P
Sbjct: 596 KGLCMNDRISEATQLFMKMQKLGCLP 621



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 177/340 (52%), Gaps = 17/340 (5%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G  P+VTT  +L++  CK G++ EA E+L+ M + GC  +I TY+ L+KGLC   R
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM----ELLNEAIERGV--TPN 259
           + EA ++ M++K  G +PD   Y  +M G C+ G+ N A+    E+LN+  + G+   P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           +V+++ + +G CK+    +   L K MK +  +PD ISY++L++G  + GK   A  +F 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM+  G   D    + L+  LC    +E  ++E A ++ E M ++  + D  TY  +I+ 
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILC----KEGKVIE-ANELLEVMIQRGCILDIVTYSTLIKG 235

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM------YE 433
           L    +  EA        ++G  P  I +  +++ LC  G I+ AL L   M      Y 
Sbjct: 236 LCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYG 295

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               P+  SY ++I  L +  +  +A  L+     QG++P
Sbjct: 296 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMP 335


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/324 (33%), Positives = 176/324 (54%), Gaps = 7/324 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++ ++  ++N LCK  RL++A+++L +M    C+PN  TY  L+ GLC  GRVEEA  +
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +K  GL+ DV  Y+ ++ GFC  G  +    L +E +E+G++PNVV ++ L NG+CK
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
           +G   +   +L  M +R   PD  +Y+ ++ GL K G+ R A+ +F  M   G E     
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+ GLC     ++  + DA+++FE M +K    +  +Y  +I  L    K DEA+  
Sbjct: 188 YNVLINGLC-----KEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKL 242

Query: 393 LHHAIEMGHI--PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
               +E G+   P  ITFN VIQ LC EG++DKA+ +   M E     +  +  +LI + 
Sbjct: 243 FSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEY 302

Query: 451 DQLEKSYDACALYGAALKQGVIPQ 474
            +      A  L+    K G++P 
Sbjct: 303 IKSGIIDKAMELWKRVHKLGLVPS 326



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 181/368 (49%), Gaps = 7/368 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  +N ++  L      E AV    E       PNS+T+ I++   C +    EA +++ 
Sbjct: 10  IVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLG 69

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G   +V  ++ L++  C  G L     + D+M   G  PN+  Y+CL+ G C  G
Sbjct: 70  EMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKG 129

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
              EA  +L  +   G++PDVYTYT ++ G CK GR+ +A++L +   E+G  P+ VT+N
Sbjct: 130 LWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYN 189

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L NG CKEG       + + M ++    + +SY+TL+ GL   GK+  A+ +F  ++  
Sbjct: 190 VLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLED 249

Query: 325 G--FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
           G   E D    N++++GLC     ++  L+ A ++++ M ++ S  +  T  I+I    K
Sbjct: 250 GNYVEPDVITFNTVIQGLC-----KEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
               D+A+       ++G +P + T++ +I   C    ++ A  L   M      P+   
Sbjct: 305 SGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFD 364

Query: 443 YDMLITKL 450
           Y+ L+  L
Sbjct: 365 YNTLMASL 372



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 175/334 (52%), Gaps = 7/334 (2%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           + P+  +++ +I   C +    +A  ++  M  +   PN  T+ IL++ LCK GR++EA+
Sbjct: 6   ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            +L +M R G + ++  Y+ L+ G C  G ++    +   +   G+ P+V  Y+ +++GF
Sbjct: 66  RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGF 125

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK G   EA  +L+   ERG+ P+V T+  +  G CK+G   K + L  LM ++   P  
Sbjct: 126 CKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPST 185

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           ++Y+ L+NGL K G I  A  IF+ M+  G  ++    N+L+ GLC         L++A 
Sbjct: 186 VTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLC-----NNGKLDEAM 240

Query: 356 QVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           ++F  + +  +  +P   T+  VI+ L K  + D+A+      IE G      T + +I 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                G IDKA+ L   +++   +PS T+Y ++I
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMI 334



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 189/418 (45%), Gaps = 32/418 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E + +   +K+ G    V  ++ L+         +     F E    G++PN  
Sbjct: 57  KEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVV 116

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +S +I  +C K  + EA  V+  M + G  P+V T+T ++  LCK GR ++AL++ D M
Sbjct: 117 VYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLM 176

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P+  TYN L+ GLC  G + +A+++   +   G + +V +Y  ++ G C  G+ 
Sbjct: 177 TEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKL 236

Query: 242 NEAMELLNEAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           +EAM+L +  +E G  V P+V+TFNT+  G CKEG   K V +   M +R    +  +  
Sbjct: 237 DEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC------------------ 341
            L+   +K G I  A+ ++K + + G        + ++ G C                  
Sbjct: 297 ILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKIS 356

Query: 342 ------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                       M S  ++  LE A ++F++M +     D  ++ I+I    K      A
Sbjct: 357 GLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSA 416

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              L+   +MG  P   T+++ I  L   G++++A      M      P    YD LI
Sbjct: 417 KELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLI 474



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 179/417 (42%), Gaps = 46/417 (11%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A++   E    GL  +   +S +I  +C+K      + + D M + G  PNV  ++ L
Sbjct: 62  EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +N  CK G  +EA  VL  M   G +P++ TY C++ GLC  GR  +A ++   +   G 
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 222 KPDVYTYTAVMDGFCKV-----------------------------------GRSNEAME 246
           +P   TY  +++G CK                                    G+ +EAM+
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 247 LLNEAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           L +  +E G  V P+V+TFNT+  G CKEG   K V +   M +R    +  +   L+  
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
            +K G I  A+ ++K + + G        + ++ G C     +  +L  A  +F +M  K
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFC-----KMHMLNFAKGLFSRM--K 354

Query: 365 VSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +S   P    Y  ++ +L K    ++A        E    P TI+FN +I      G I 
Sbjct: 355 ISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIH 414

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
            A  LL  M +    P   +Y   I +L +L +  +A   + + +  G+ P     D
Sbjct: 415 SAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYD 471



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 177/389 (45%), Gaps = 7/389 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           ++ +D+FD + + G   S   +N L+  L        A K F      G      +++ +
Sbjct: 167 RKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTL 226

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYH--PNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           I   CN     EA K+   + ++G +  P+V TF  ++  LCK GRL +A+E+ D M   
Sbjct: 227 IMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIER 286

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G   N+ T + L+      G +++A E+   V   GL P   TY+ ++DGFCK+   N A
Sbjct: 287 GSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFA 346

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L +     G++P +  +NTL    CKE +  +   L + MK+ NC PD IS++ +++G
Sbjct: 347 KGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDG 406

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
            LK G I  A  +  +M + G   D    +S +  L      +   +E+A   F+ M   
Sbjct: 407 TLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRL-----SKLGQMEEAKGAFDSMIAS 461

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D   Y  +I+  G   + +E +  L    +MG I      N+++  LC   +    
Sbjct: 462 GITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHV 521

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
           + LL      +   +  S D L+ K+ + 
Sbjct: 522 MELLPNFSSESSGGTSISCDKLLMKIQKF 550



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 153/326 (46%), Gaps = 8/326 (2%)

Query: 47  ENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAV 105
           E P ++     ++ + K   + +   IF+++ + G    V  +N L+M L    + + A+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 106 KFFSEASSYG--LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           K FS     G  + P+  TF+ +I+  C +    +A ++ D M + G   N+ T  IL+ 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
              KSG + +A+E+  ++ ++G  P+  TY+ ++ G C +  +  A  +   +K  GL P
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            ++ Y  +M   CK     +A  L  E  E    P+ ++FN + +G  K G       LL
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M++    PD  +YS+ +N L K G++  A   F  M+  G   D  + +SL++G  + 
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGL- 479

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTD 369
                D +E+   +  +M     + D
Sbjct: 480 ----NDEIEEVINLLRQMADMGVILD 501



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 120/257 (46%), Gaps = 3/257 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK+  + + ++++  + K G   S + ++ ++     ++    A   FS     GL+P  
Sbjct: 303 IKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTL 362

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           + ++ ++   C ++   +AR++   M ++   P+  +F I+++   K+G +  A E+L+ 
Sbjct: 363 FDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLND 422

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M ++G  P+  TY+  +  L  +G++EEA     ++   G+ PD + Y +++ GF     
Sbjct: 423 MQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDE 482

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             E + LL +  + GV  ++   N++    C     +  + LL      +     IS   
Sbjct: 483 IEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDK 542

Query: 301 LLNGLLKWGKIRPAVSI 317
           L   L+K  K  P + I
Sbjct: 543 L---LMKIQKFNPKLQI 556


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 213/444 (47%), Gaps = 41/444 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LKE +++   +   G   +    N ++     +   E A   F E    G+ P+S ++ +
Sbjct: 151 LKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRV 210

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGY---------------------------------- 151
           M+  YC   +  EA K +  M + G+                                  
Sbjct: 211 MVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMG 270

Query: 152 -HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PN+  FT ++  LCK G +K+A E+L++M   G KPN+ T+  L+ GLC  G  E+A+
Sbjct: 271 LEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAF 330

Query: 211 EMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            + +  V+++  KP+V TYTA++ G+C+  + N A  LL+   E+G+ PN  T+ TL +G
Sbjct: 331 RLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDG 390

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           +CK G   +   L+ LM      P+  +Y+ ++NGL K G+++ A  + ++  + G + D
Sbjct: 391 HCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPD 450

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
           +   N L+   C     +++ +  A  +F KM K     D  +Y  +I    +  +  E+
Sbjct: 451 KFTYNILMSEHC-----KQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKES 505

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
            +    A+ +G IP   T+ ++I   C EG +  A+     + +H   P   +Y  +I+ 
Sbjct: 506 EMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISG 565

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
           L +  K  +A +LY + +++G++P
Sbjct: 566 LCKQSKRDEARSLYDSMIEKGLVP 589



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 153/304 (50%), Gaps = 6/304 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNS 120
           K   +K+  ++ + +   G   +V     L+  L      E A + F +   S    PN 
Sbjct: 287 KRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNV 346

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ MI  YC ++    A  ++  M + G  PN  T+T L++  CK+G  + A ++++ 
Sbjct: 347 LTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNL 406

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  PN+ TYN ++ GLC  GRV+EAY+ML +   +GLKPD +TY  +M   CK   
Sbjct: 407 MSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQEN 466

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A+ L N+ ++ G+ P++ ++ TL   +C+E    +     +   +   +P   +Y++
Sbjct: 467 IRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTS 526

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++ G  + G +  A+  F  +   G   D     +++ GLC +S  ++D   +A  +++ 
Sbjct: 527 MICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQS--KRD---EARSLYDS 581

Query: 361 MTKK 364
           M +K
Sbjct: 582 MIEK 585



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 157/317 (49%), Gaps = 8/317 (2%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           +V S  + GRLKEA+E++ +M   G  PN +T N ++K    +G VE A  +   +   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           ++PD  +Y  ++  +CK+G   EA + L+  +ERG   +  TF  + + +  +G   + +
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
              + +      P+ I+++ ++ GL K G I+ A  + +EMV  G++ +     SL+ GL
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIE 398
           C K W EK     A+++F K+ +  +   P   TY  +I    +  K + A + L    E
Sbjct: 321 CKKGWTEK-----AFRLFLKLVRSEN-HKPNVLTYTAMISGYCREDKLNRAEMLLSRMKE 374

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G +P T T+  +I   C  G  ++A  L+ LM      P+  +Y+ ++  L +  +  +
Sbjct: 375 QGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQE 434

Query: 459 ACALYGAALKQGVIPQR 475
           A  +     + G+ P +
Sbjct: 435 AYKMLEDGFQNGLKPDK 451



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 106/211 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA   +   D+ + +  +G + ++  +N ++  L      + A K   +    GL P+ +
Sbjct: 393 KAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKF 452

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I++  +C + +  +A  + + M   G  P++ ++T L+   C+  R+KE+    ++ 
Sbjct: 453 TYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEA 512

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            RIG  P  +TY  ++ G C  G +  A +    + + G  PD  TY A++ G CK  + 
Sbjct: 513 VRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKR 572

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           +EA  L +  IE+G+ P  VT  TL   YCK
Sbjct: 573 DEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 104/200 (52%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A    +  SS G +PN  T++ ++   C +    EA K+++  F NG  P+  T+ IL
Sbjct: 398 ERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNIL 457

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++  CK   +++AL + ++M +IG +P+I +Y  L+   C   R++E+          G+
Sbjct: 458 MSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGI 517

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P   TYT+++ G+C+ G    AM+  +   + G  P+ +T+  + +G CK+    +   
Sbjct: 518 IPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARS 577

Query: 282 LLKLMKKRNCLPDKISYSTL 301
           L   M ++  +P +++  TL
Sbjct: 578 LYDSMIEKGLVPCEVTRITL 597



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 12/153 (7%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           +  K   +++ + +F+ + K G    +  +  L+      N  + +  FF EA   G+ P
Sbjct: 460 EHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIP 519

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
            + T++ MI  YC + +   A K    + D+G  P+  T+  +++ LCK  +  EA  + 
Sbjct: 520 TNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLY 579

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
           D M   G  P            C V R+  AYE
Sbjct: 580 DSMIEKGLVP------------CEVTRITLAYE 600


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 210/454 (46%), Gaps = 48/454 (10%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDL 91
           F A  ++   +L  +E  RS      VD IKA    + ID+F  +       +V DF+ L
Sbjct: 141 FIARMVANDRNLSYRERLRS----GLVD-IKAD---DAIDLFRDMIHSRPLPTVIDFSRL 192

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
             A+    + +  +    +    G+A N +T SIMI C+C       A   +  +   GY
Sbjct: 193 FSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGY 252

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY- 210
            PN  TF+ L+N LC  GR+ EALE++D+M  +G KP++ T N L+ GLC  G+  EA  
Sbjct: 253 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 312

Query: 211 ----------------------------------EMLMNVKNDGLKPDVYTYTAVMDGFC 236
                                             E+L  ++   +K D   Y+ ++DG C
Sbjct: 313 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 372

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G  + A  L NE   +G+T N++T+N L  G+C  G    G  LL+ M KR   P+ +
Sbjct: 373 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 432

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           ++S L++  +K GK+R A  + KEM+  G   D     SL+ G C     +++ L+ A Q
Sbjct: 433 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC-----KENHLDKANQ 487

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           + + M  K    +  T+ I+I    K  + D+ L         G +  T+T+N +IQ  C
Sbjct: 488 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 547

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             GK++ A  L   M      P+  +Y +L+  L
Sbjct: 548 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 581



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 188/417 (45%), Gaps = 40/417 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E +++ D + + G    +   N L+  L +  ++  A+    +   YG  PN+ T+  
Sbjct: 272 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 331

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C       A +++  M +     +   ++I+++ LCK G L  A  + ++M   G
Sbjct: 332 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 391

Query: 186 CKPNIQTYNCLLKGLCYVGR-----------------------------------VEEAY 210
              NI TYN L+ G C  GR                                   + EA 
Sbjct: 392 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 451

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E+   + + G+ PD  TYT+++DGFCK    ++A ++++  + +G  PN+ TFN L NGY
Sbjct: 452 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 511

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK      G+ L + M  R  + D ++Y+TL+ G  + GK+  A  +F+EMV      + 
Sbjct: 512 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 571

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                LL GLC     EK     A ++FEK+ K     D G Y I+I  +    K D+A 
Sbjct: 572 VTYKILLDGLCDNGESEK-----ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 626

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                    G  P   T+N +I  LC +G + +A LL   M E    P   +Y++LI
Sbjct: 627 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 683



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 182/354 (51%), Gaps = 10/354 (2%)

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           +IK D   +S+     ++  L      + A   F+E    G+  N  T++I+I  +CN  
Sbjct: 356 NIKLDAVKYSI-----IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 410

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
            + +  K++  M     +PNV TF++L++S  K G+L+EA E+  +M   G  P+  TY 
Sbjct: 411 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 470

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+ G C    +++A +M+  + + G  P++ T+  +++G+CK  R ++ +EL  +   R
Sbjct: 471 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 530

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           GV  + VT+NTL  G+C+ G       L + M  R   P+ ++Y  LL+GL   G+   A
Sbjct: 531 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 590

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           + IF+++ +   E+D  + N ++ G+C  S      ++DA+ +F  +  K       TY 
Sbjct: 591 LEIFEKIEKSKMELDIGIYNIIIHGMCNAS-----KVDDAWDLFCSLPLKGVKPGVKTYN 645

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           I+I  L K     EA +      E GH P   T+N +I+A  G+G   K++ L+
Sbjct: 646 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 699



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 163/324 (50%), Gaps = 7/324 (2%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G   N+ T +I++N  C+  +L  A   + ++ ++G +PN  T++ L+ GLC  GRV EA
Sbjct: 216 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 275

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            E++  +   G KPD+ T   +++G C  G+  EAM L+++ +E G  PN VT+  + N 
Sbjct: 276 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 335

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            CK G     + LL+ M++RN   D + YS +++GL K G +  A ++F EM   G   +
Sbjct: 336 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 395

Query: 330 ERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
               N L+ G C    W+      D  ++   M K+    +  T+ ++I +  K  K  E
Sbjct: 396 IITYNILIGGFCNAGRWD------DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 449

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A       I  G  P TIT+ ++I   C E  +DKA  ++ LM      P+  ++++LI 
Sbjct: 450 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 509

Query: 449 KLDQLEKSYDACALYGAALKQGVI 472
              +  +  D   L+     +GV+
Sbjct: 510 GYCKANRIDDGLELFRKMSLRGVV 533



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 157/326 (48%), Gaps = 6/326 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L    ++F+ ++  G   ++  +N L+         +   K   +     + PN  
Sbjct: 373 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 432

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS++I  +  +    EA ++   M   G  P+  T+T L++  CK   L +A +++D M
Sbjct: 433 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 492

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PNI+T+N L+ G C   R+++  E+   +   G+  D  TY  ++ GFC++G+ 
Sbjct: 493 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 552

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           N A EL  E + R V PN+VT+  L +G C  G   K + + + ++K     D   Y+ +
Sbjct: 553 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 612

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G+    K+  A  +F  +   G +   +  N ++ GLC     +K  L +A  +F KM
Sbjct: 613 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC-----KKGPLSEAELLFRKM 667

Query: 362 TKKVSVTDPGTYGIVIRT-LGKGKKT 386
            +     D  TY I+IR  LG G  T
Sbjct: 668 EEDGHAPDGWTYNILIRAHLGDGDAT 693



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 1/285 (0%)

Query: 46  KENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA 104
           K NP  +     +D  +K   L+E  ++   +   G       +  L+      N  + A
Sbjct: 426 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 485

Query: 105 VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
            +      S G  PN  TF+I+I  YC  N   +  ++   M   G   +  T+  L+  
Sbjct: 486 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 545

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
            C+ G+L  A E+  +M      PNI TY  LL GLC  G  E+A E+   ++   ++ D
Sbjct: 546 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 605

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           +  Y  ++ G C   + ++A +L      +GV P V T+N +  G CK+G   +   L +
Sbjct: 606 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 665

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            M++    PD  +Y+ L+   L  G    +V + +E+ R GF VD
Sbjct: 666 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 710



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 132/287 (45%), Gaps = 7/287 (2%)

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P +  ++ L   +    + +    +   ++  G+  ++YT + +++ FC+  +   A   
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 243

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           + + I+ G  PN +TF+TL NG C EG   + + L+  M +    PD I+ +TL+NGL  
Sbjct: 244 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 303

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK   A+ +  +MV +G + +      +L  +C            A ++  KM ++   
Sbjct: 304 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL-----AMELLRKMEERNIK 358

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-GHIPRTITFNNVIQALCGEGKIDKALL 426
            D   Y I+I  L K    D A  +L + +EM G     IT+N +I   C  G+ D    
Sbjct: 359 LDAVKYSIIIDGLCKHGSLDNAF-NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 417

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LL  M +    P+  ++ +LI    +  K  +A  L+   + +G+ P
Sbjct: 418 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 464



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/207 (20%), Positives = 101/207 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA+ + + +++F  +   G       +N L+     L +   A + F E  S  + PN  
Sbjct: 513 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 572

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ I++   C+  +  +A ++ + +  +    ++  + I+++ +C + ++ +A ++   +
Sbjct: 573 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 632

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP ++TYN ++ GLC  G + EA  +   ++ DG  PD +TY  ++      G +
Sbjct: 633 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 692

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFN 268
            ++++L+ E    G + +  T   + +
Sbjct: 693 TKSVKLIEELKRCGFSVDASTIKMVID 719



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           AS + +  D+F S+   G    V  +N ++  L        A   F +    G AP+ WT
Sbjct: 619 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 678

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           ++I+IR +    D  ++ K+I+ +   G+  + +T  ++++ L
Sbjct: 679 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 721


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 205/407 (50%), Gaps = 5/407 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FDS+  DG   +V  +N L+ AL     ++ A+    +    G  PN  T++ ++  +  
Sbjct: 138 FDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFR 197

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
             +   A +++  M D G  PN+ TF  +VN +CK+G++++A +V D+M R G  P+  +
Sbjct: 198 AGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVS 257

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN L+ G C  G   EA  +   +   G+ PDV T+T+++   CK G    A+ L+ +  
Sbjct: 258 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMR 317

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           ERG+  N VTF  L +G+CK+G     +  ++ M++    P  + Y+ L+NG    G++ 
Sbjct: 318 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMD 377

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A  +  EM   G + D    ++++   C K+ +       A+++ ++M +K  + D  T
Sbjct: 378 EARELLHEMEAKGLKPDVVTYSTIISAYC-KNCDT----HSAFELNQQMLEKGVLPDAIT 432

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y  +IR L + K+  +A +   + I++G  P   T+ ++I   C EG +++AL L   M 
Sbjct: 433 YSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMV 492

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           +   +P   +Y +LI  L +  ++ +A  L      +  IP     D
Sbjct: 493 KAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYD 539



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 182/352 (51%), Gaps = 12/352 (3%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   ++  FN ++  +    + E A K F E    GLAP+  +++ ++  YC      EA
Sbjct: 215 GLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEA 274

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             V   M   G  P+V TFT L++ +CK+G L+ A+ ++ QM   G + N  T+  L+ G
Sbjct: 275 LSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDG 334

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C  G +++A   +  ++   +KP V  Y A+++G+C VGR +EA ELL+E   +G+ P+
Sbjct: 335 FCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPD 394

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VVT++T+ + YCK         L + M ++  LPD I+YS+L+  L +  ++  A  +FK
Sbjct: 395 VVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFK 454

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            M++ G + DE    SL+ G C +   E+     A  + +KM K   + D  TY ++I  
Sbjct: 455 NMIKLGLQPDEFTYTSLIDGHCKEGNVER-----ALSLHDKMVKAGVLPDVVTYSVLING 509

Query: 380 LGKGKKTDEA---LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           L K  +  EA   L  L+H      IP    ++ ++   C + ++   L LL
Sbjct: 510 LSKSARAMEAQQLLFKLYHEEP---IPANTKYDALMHC-CRKAELKSVLALL 557



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 212/467 (45%), Gaps = 59/467 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++   +FD + ++G       +N L+           A+  F+E +  G+ P+  
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 291

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C   +   A  ++  M + G   N  TFT L++  CK G L +AL  +  M
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 351

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +   KP++  YN L+ G C VGR++EA E+L  ++  GLKPDV TY+ ++  +CK   +
Sbjct: 352 RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411

Query: 242 NEAMELLNEAIERGVTPNVVTFN-----------------------------------TL 266
           + A EL  + +E+GV P+ +T++                                   +L
Sbjct: 412 HSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 471

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR-------------- 312
            +G+CKEG   + + L   M K   LPD ++YS L+NGL K  +                
Sbjct: 472 IDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEP 531

Query: 313 -PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
            PA + +  ++    + + + + +LL+G CMK      L+ +A +V++ M  +    D  
Sbjct: 532 IPANTKYDALMHCCRKAELKSVLALLKGFCMKG-----LMNEADKVYQSMLDRNWNLDGS 586

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            Y ++I    +     +AL      ++ G  P + +  ++I+ L   G + +A  ++  +
Sbjct: 587 VYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 646

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDAC--ALYGAALKQGVIPQRK 476
                +    +   LI  L+  E + DA    L+G A K G++P  +
Sbjct: 647 LNCCSLADAEASKALI-DLNLNEGNVDAVLDVLHGMA-KDGLLPSPR 691


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 199/406 (49%), Gaps = 7/406 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D + K G +   + +N LL+     +    A + F E  S G+ P+  +FS +I    
Sbjct: 450 VLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLS 509

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A K    M + G  P+   +TIL+   C++G + EAL+V D+M   GC  ++ 
Sbjct: 510 KNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVV 569

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN +L GLC    + EA E+   +   G+ PD YT+T +++G+ K G  N+A+ L    
Sbjct: 570 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMM 629

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVG-LLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
           I+R + P+VVT+NTL +G+CK G+ M+ V  L   M  R   P+ ISY  L+NG    G 
Sbjct: 630 IQRNLKPDVVTYNTLIDGFCK-GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 688

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A  ++ EMV  GFE      N++++G C      K     A +    M  K  V D 
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK-----ADEFLSNMLLKGIVPDG 743

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I    K +  D A   ++     G +P  IT+N ++     +G++ +A L++  
Sbjct: 744 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 803

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           M E    P R++Y  LI          +A  ++   L++G +P  K
Sbjct: 804 MIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 849



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 199/438 (45%), Gaps = 40/438 (9%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I+  + + G   +V   N ++ AL    + E    F S+    G+ P+  T++ +I  Y
Sbjct: 344 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 403

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +    EA +++D M   G  P V T+  ++N LCK+G+   A  VLD+M +IG  P+ 
Sbjct: 404 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463

Query: 191 QTYNCLLKGLCYV-----------------------------------GRVEEAYEMLMN 215
            TYN LL   C                                     G +++A +   +
Sbjct: 464 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 523

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +KN GL PD   YT ++ GFC+ G  +EA+++ +E +E+G   +VVT+NT+ NG CKE  
Sbjct: 524 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   L   M +R   PD  +++TL+NG  K G +  AV++F+ M++   + D    N+
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 643

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+ G C  S  EK       +++  M  +    +  +YGI+I          EA      
Sbjct: 644 LIDGFCKGSEMEK-----VNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 698

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
            +E G     IT N +++  C  G   KA   L  M     +P   +Y+ LI    + E 
Sbjct: 699 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 758

Query: 456 SYDACALYGAALKQGVIP 473
              A AL       G++P
Sbjct: 759 MDRAFALVNKMENSGLLP 776



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 195/410 (47%), Gaps = 5/410 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++A  L+E  + F  +K  G   S++  N LL  LV +   + A + + E    G+  N 
Sbjct: 299 VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNV 358

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T +IMI   C        +  +  M + G  P+V T+  L+N+ C+ G L+EA E++D 
Sbjct: 359 YTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS 418

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G KP + TYN ++ GLC  G+   A  +L  +   G+ PD  TY  ++   C+   
Sbjct: 419 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 478

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  + +E   +GV P++V+F+ L     K G   + +   + MK     PD + Y+ 
Sbjct: 479 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 538

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+ G  + G +  A+ +  EM+  G  +D    N++L GLC     ++ +L +A ++F +
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLC-----KEKMLSEADELFTE 593

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           MT++    D  T+  +I    K    ++A+      I+    P  +T+N +I   C   +
Sbjct: 594 MTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 653

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           ++K   L   M      P+  SY +LI     +    +A  L+   +++G
Sbjct: 654 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 703



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 152/304 (50%), Gaps = 5/304 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D + + G    V  +N +L  L        A + F+E +  G+ P+ +TF+ 
Sbjct: 549 MSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 608

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  Y    +  +A  + + M      P+V T+  L++  CK   +++  E+ + M    
Sbjct: 609 LINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 668

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  +Y  L+ G C +G V EA+ +   +   G +  + T   ++ G+C+ G + +A 
Sbjct: 669 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 728

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E L+  + +G+ P+ +T+NTL NG+ KE    +   L+  M+    LPD I+Y+ +LNG 
Sbjct: 729 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 788

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G+++ A  I  +M+  G   D     SL+ G        ++ L++A++V ++M ++ 
Sbjct: 789 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHV-----TQNNLKEAFRVHDEMLQRG 843

Query: 366 SVTD 369
            V D
Sbjct: 844 FVPD 847



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 5/320 (1%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N   F +LV +  ++ +L+E  E    +   G   +I   N LL GL  VG V+ A+E+ 
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             V   G++ +VYT   +++  CK  +       L++  E+GV P+VVT+NTL N YC++
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +   L+  M  +   P   +Y+ ++NGL K GK   A  +  EM++ G   D    
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 466

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           N LL   C       D + DA ++F++M  +  V D  ++  +I  L K    D+AL + 
Sbjct: 467 NILLVECC-----RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 521

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
                 G  P  + +  +I   C  G + +AL +   M E        +Y+ ++  L + 
Sbjct: 522 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKE 581

Query: 454 EKSYDACALYGAALKQGVIP 473
           +   +A  L+    ++GV P
Sbjct: 582 KMLSEADELFTEMTERGVFP 601



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 158/371 (42%), Gaps = 41/371 (11%)

Query: 113 SYG-LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           +YG    N   F +++R Y       E  +    +   G   ++     L+  L K G +
Sbjct: 280 TYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWV 339

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
             A E+  ++ R G + N+ T N ++  LC   ++E     L +++  G+ PDV TY  +
Sbjct: 340 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 399

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK--- 288
           ++ +C+ G   EA EL++    +G+ P V T+N + NG CK G  ++  G+L  M K   
Sbjct: 400 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 459

Query: 289 --------------------------------RNCLPDKISYSTLLNGLLKWGKIRPAVS 316
                                           +  +PD +S+S L+  L K G +  A+ 
Sbjct: 460 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 519

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
            F++M   G   D  +   L+ G C        ++ +A +V ++M ++    D  TY  +
Sbjct: 520 YFRDMKNAGLAPDNVIYTILIGGFC-----RNGVMSEALKVRDEMLEQGCXLDVVTYNTI 574

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +  L K K   EA        E G  P   TF  +I     +G ++KA+ L  +M +   
Sbjct: 575 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL 634

Query: 437 IPSRTSYDMLI 447
            P   +Y+ LI
Sbjct: 635 KPDVVTYNTLI 645



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 132/270 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E  ++F  + + G       F  L+           AV  F       L P+  
Sbjct: 580 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVV 639

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C  ++  +  ++ + M     +PN  ++ IL+N  C  G + EA  + D+M
Sbjct: 640 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 699

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +  I T N ++KG C  G   +A E L N+   G+ PD  TY  +++GF K    
Sbjct: 700 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 759

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A  L+N+    G+ P+V+T+N + NG+ ++G   +   ++  M +R   PD+ +Y++L
Sbjct: 760 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 819

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           +NG +    ++ A  +  EM++ GF  D++
Sbjct: 820 INGHVTQNNLKEAFRVHDEMLQRGFVPDDK 849


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 213/427 (49%), Gaps = 41/427 (9%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  +  DG   ++  FN ++ A   +     A  +F     +G   +S+T++ +I  YC
Sbjct: 177 LFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYC 236

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             ++  +A KV + M   G   N  ++T L++  C+ G++ EALE+  QM   GC P++ 
Sbjct: 237 KIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVP 296

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+   C VG+  EA +    +  +G++P+VYTYT ++D FCKVG+ +E ME+L+  
Sbjct: 297 TYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTM 356

Query: 252 IERGVTPNVVTFNTLFNGYCKEG-----------------------------------TP 276
           +E+G+  +VV FN L +GYCK G                                   + 
Sbjct: 357 LEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSM 416

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            + + LL  M +    P+ ++Y+TL++GL K   +  A  +   M++ GF  D+R   + 
Sbjct: 417 DRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAF 476

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +  LC     +   +E A+QVFE + +K +  +   Y  +I    K +K  +A +     
Sbjct: 477 IDCLC-----KMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRM 531

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           +  G  P +ITFN ++  L  EGK++ A+ L+ +M +    P+  +Y +LI ++ + E  
Sbjct: 532 LFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILR-ESD 590

Query: 457 YDACALY 463
           +D   ++
Sbjct: 591 FDRANMF 597



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 184/390 (47%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV+ +N L M L      +     F +  + G+ PN  +F+ M+  +C   +   A+   
Sbjct: 154 SVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYF 213

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   G+  +  T+T L+   CK   L +A +V + M + GC  N  +Y  L+ G C V
Sbjct: 214 CGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEV 273

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G+++EA E+   +K DG  PDV TYT ++  FC+VG+  EA++   E +E G+ PNV T+
Sbjct: 274 GKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTY 333

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             L + +CK G   +G+ +L  M ++  +   + ++ L++G  K G +  A+ +   M  
Sbjct: 334 TVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKL 393

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                + R  N L+ G C      K  ++ A  +  KM +     +  TY  +I  L K 
Sbjct: 394 NKVCPNSRTYNELICGFC-----RKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKA 448

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           +  D A    H  I+ G +P   TF   I  LC  GK+++A  +   + E     +   Y
Sbjct: 449 RVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLY 508

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
             LI    + EK  DA  L+   L +G  P
Sbjct: 509 TALIDGYCKAEKFSDAHLLFKRMLFEGCFP 538



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 206/445 (46%), Gaps = 30/445 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L +   +F+ + ++G   +   + +L+     + + + A++ F +    G  P+  
Sbjct: 237 KIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVP 296

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+++++  +C      EA K  + M +NG  PNV T+T+L++  CK G++ E +E+L  M
Sbjct: 297 TYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTM 356

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   ++  +N L+ G C  G +E+A  +L ++K + + P+  TY  ++ GFC+    
Sbjct: 357 LEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSM 416

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + AM LLN+  E  ++PN+VT+NTL +G CK         L  LM K   +PD+ ++   
Sbjct: 417 DRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAF 476

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLL--------- 351
           ++ L K GK+  A  +F+ +     E +E +  +L+ G C  + + +  LL         
Sbjct: 477 IDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGC 536

Query: 352 --------------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
                               EDA  + + M K  +     TY I+I  + +    D A +
Sbjct: 537 FPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANM 596

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            L   I  G  P  +T+   I+A C +G++ +A  ++  + E   +     YD+L+    
Sbjct: 597 FLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYG 656

Query: 452 QLEKSYDACALYGAALKQGVIPQRK 476
            + +   A  +       G  P R+
Sbjct: 657 CIGQLDSAFGVLIRMFDTGCEPSRQ 681



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 167/373 (44%), Gaps = 14/373 (3%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           KDG       F   +  L  + + E A + F          N + ++ +I  YC    F 
Sbjct: 463 KDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFS 522

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +A  +   M   G  PN  TF +L++ L K G++++A+ ++D MG+   KP + TY  L+
Sbjct: 523 DAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILI 582

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
           + +      + A   L  + + G +P+V TYTA +  +C+ GR  EA E++ +  E G+ 
Sbjct: 583 EEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGIL 642

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            +   ++ L N Y   G      G+L  M    C P + +YS LL  L           I
Sbjct: 643 LDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHL-----------I 691

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F++  + G  +D    N  +       W+  D  E    +FEKM ++  V +  TY  +I
Sbjct: 692 FEKYNKEGMGLDLNSTNISVDN--ANIWKIADF-EIITMLFEKMVEQGCVPNVNTYSKLI 748

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
           + L K +    A    +H  E G  P     N+++ + C  G  ++AL LL  M E+  +
Sbjct: 749 KGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHL 808

Query: 438 PSRTSYDMLITKL 450
               SY +L+  L
Sbjct: 809 AHLESYKLLVCGL 821



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/440 (23%), Positives = 197/440 (44%), Gaps = 31/440 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +++  ++ + G   SV  FN L+         E A+          + PNS 
Sbjct: 342 KVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSR 401

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C K     A  +++ M++N   PN+ T+  L++ LCK+  +  A  +   M
Sbjct: 402 TYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLM 461

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P+ +T+   +  LC +G+VE+A+++  ++K    + + + YTA++DG+CK  + 
Sbjct: 462 IKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKF 521

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A  L    +  G  PN +TFN L +G  KEG     + L+ +M K +  P   +Y+ L
Sbjct: 522 SDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTIL 581

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  +L+      A     +M+  G + +     + ++  C     +  LLE A ++  K+
Sbjct: 582 IEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYC----RQGRLLE-AEEMVVKI 636

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG-- 419
            ++  + D   Y +++   G   + D A   L    + G  P   T++ +++ L  E   
Sbjct: 637 KEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYN 696

Query: 420 -------------KIDKA----------LLLLF-LMYEHAKIPSRTSYDMLITKLDQLEK 455
                         +D A          + +LF  M E   +P+  +Y  LI  L ++E 
Sbjct: 697 KEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEH 756

Query: 456 SYDACALYGAALKQGVIPQR 475
              A  L+    + G+ P  
Sbjct: 757 LSLAFRLFNHMKESGISPSE 776



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 158/339 (46%), Gaps = 5/339 (1%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EAR V++ +  + +  +VT++  L   L + G + E   +   M   G +PN+ ++N ++
Sbjct: 138 EARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMV 197

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
              C +G V  A      +   G   D +TYT+++ G+CK+    +A ++     + G  
Sbjct: 198 NAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCL 257

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            N V++  L +G+C+ G   + + L   MK+  C PD  +Y+ L+    + GK   A+  
Sbjct: 258 RNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKF 317

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F+EMV  G E +      L+   C     +   +++  ++   M +K  V+    +  +I
Sbjct: 318 FEEMVENGIEPNVYTYTVLIDYFC-----KVGKMDEGMEMLSTMLEKGLVSSVVPFNALI 372

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               K    ++A+  L         P + T+N +I   C +  +D+A+ LL  MYE+   
Sbjct: 373 DGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLS 432

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           P+  +Y+ LI  L +      A  L+   +K G +P ++
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQR 471



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 146/324 (45%), Gaps = 27/324 (8%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+     +D + K   +++ + + D + K     +V  +  L+  ++  ++ + A  F
Sbjct: 538 PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMF 597

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             +  S G  PN  T++  I+ YC +    EA +++  + + G   +   + +LVN+   
Sbjct: 598 LDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGC 657

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN--------- 218
            G+L  A  VL +M   GC+P+ QTY+ LLK L +    +E   + +N  N         
Sbjct: 658 IGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIW 717

Query: 219 -----------------DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
                             G  P+V TY+ ++ G CKV   + A  L N   E G++P+  
Sbjct: 718 KIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSEN 777

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
             N+L +  CK G   + + LL  M + N L    SY  L+ GL + G    A  IF+ +
Sbjct: 778 IHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSL 837

Query: 322 VRFGFEVDERMMNSLLRGLCMKSW 345
           +  G+  DE +   LL GL  K +
Sbjct: 838 LSCGYNYDEVVWKVLLDGLVRKGY 861



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 5/237 (2%)

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           S+EA  +LN       + +V ++N LF    + G   +   L K M      P+ IS++T
Sbjct: 136 SHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNT 195

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++N   K G +  A + F  +++FGF  D     SL+ G C K  E    L DAY+VFE 
Sbjct: 196 MVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYC-KIHE----LGDAYKVFEI 250

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++  + +  +Y  +I    +  K DEAL       E G  P   T+  ++ A C  GK
Sbjct: 251 MPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGK 310

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
             +AL     M E+   P+  +Y +LI    ++ K  +   +    L++G++    P
Sbjct: 311 ETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVP 367



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 14/174 (8%)

Query: 75  SIKKDGTN-WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           +I  D  N W ++DF  + M    + EQ             G  PN  T+S +I+  C  
Sbjct: 708 NISVDNANIWKIADFEIITMLFEKMVEQ-------------GCVPNVNTYSKLIKGLCKV 754

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
                A ++ + M ++G  P+      L++S CK G  +EAL +LD M       ++++Y
Sbjct: 755 EHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESY 814

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
             L+ GL   G  E+A E+  ++ + G   D   +  ++DG  + G  +E  +L
Sbjct: 815 KLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQL 868



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 3/173 (1%)

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
           DF     + + M + G  PNV T++ L+  LCK   L  A  + + M   G  P+   +N
Sbjct: 721 DFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHN 780

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            LL   C +G  EEA  +L ++        + +Y  ++ G  + G   +A E+    +  
Sbjct: 781 SLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSC 840

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL---LNG 304
           G   + V +  L +G  ++G   +   L  +M+K  C     +++ L   LNG
Sbjct: 841 GYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQELNG 893



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 31/160 (19%), Positives = 74/160 (46%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ + + G   +V+ ++ L+  L  +     A + F+     G++P+    + ++   C
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCC 787

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA +++D M +  +  ++ ++ +LV  L + G  ++A E+   +   G   +  
Sbjct: 788 KLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEV 847

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
            +  LL GL   G V+E  ++   ++  G +    T+T +
Sbjct: 848 VWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/139 (19%), Positives = 63/139 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L     +F+ +K+ G + S +  N LL +   L   E A++       Y    +  
Sbjct: 753 KVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLE 812

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++ +++     + +  +A ++   +   GY+ +   + +L++ L + G + E  ++ D M
Sbjct: 813 SYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIM 872

Query: 182 GRIGCKPNIQTYNCLLKGL 200
            + GC+ +  T+  L + L
Sbjct: 873 EKTGCRLHSDTHTMLSQEL 891


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 195/390 (50%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +N L+     + E +  +  F E    G  PN  T++ +I  YC      EA  ++
Sbjct: 9   NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 68

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G  PN+ ++ +++N LC+ G +KEA E+L++MG  G  P+  TYN LL G C  
Sbjct: 69  KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 128

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G   +A  +   +  +G+ P V TYTA+++  CK    N AME  ++   RG+ PN  T+
Sbjct: 129 GNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 188

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
            TL +G+ ++G   +   +L  M +    P  ++Y+  ++G     ++  A+ + +EMV 
Sbjct: 189 TTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE 248

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D    ++++ G C K       L+ A+Q+ ++M +K    D  TY  +I+ L + 
Sbjct: 249 KGLAPDVVSYSTIISGFCRKGE-----LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 303

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           ++  EA       ++MG  P   T+  +I A C EG ++KAL L   M     +P   +Y
Sbjct: 304 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 363

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +LI  L++  ++ +A  L    + +  +P
Sbjct: 364 SVLINGLNKQARTREAKRLLFKLIYEESVP 393



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 204/391 (52%), Gaps = 9/391 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ +  F  ++++G   +V  +N L+ A   +   + A       SS G+ PN  ++++
Sbjct: 26  LQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNV 85

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C +    EA ++++ M   G+ P+  T+  L+N  CK G   +AL +  +M R G
Sbjct: 86  IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 145

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ TY  L+  +C    +  A E    ++  GL+P+  TYT ++DGF + G  NEA 
Sbjct: 146 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 205

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +LNE  E G +P+VVT+N   +G+C      + +G+++ M ++   PD +SYST+++G 
Sbjct: 206 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 265

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G++  A  + +EMV  G   D    +SL++GLC     E   L +A  + ++M    
Sbjct: 266 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC-----EMRRLTEACDLSQEMLDMG 320

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLH-HAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              D  TY  +I         ++AL HLH   I  G +P  +T++ +I  L  + +  +A
Sbjct: 321 LPPDEFTYTTLINAYCVEGDLNKAL-HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 379

Query: 425 LLLLF-LMYEHAKIPSRTSYDMLITKLDQLE 454
             LLF L+YE + +PS  +YD LI     +E
Sbjct: 380 KRLLFKLIYEES-VPSDVTYDTLIENCSNIE 409



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 208/431 (48%), Gaps = 26/431 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   +  S+   G   ++  +N ++  L      + A +   E    G  P+  
Sbjct: 57  KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 116

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  YC + +F +A  +   M  NG  P+V T+T L+NS+CK+  L  A+E  DQM
Sbjct: 117 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 176

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +PN +TY  L+ G    G + EAY +L  +   G  P V TY A + G C + R 
Sbjct: 177 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 236

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA+ ++ E +E+G+ P+VV+++T+ +G+C++G   +   + + M ++   PD ++YS+L
Sbjct: 237 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 296

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL +  ++  A  + +EM+  G   DE    +L+   C+    E D L  A  + ++M
Sbjct: 297 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV----EGD-LNKALHLHDEM 351

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ-------- 413
             K  + D  TY ++I  L K  +T EA   L   I    +P  +T++ +I+        
Sbjct: 352 IHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFK 411

Query: 414 -------ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALY 463
                    C +G + +A  +   M E    P    Y+++I    +   L K+++   LY
Sbjct: 412 SVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN---LY 468

Query: 464 GAALKQGVIPQ 474
              +  G +P 
Sbjct: 469 KEMIHSGFVPH 479



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 154/323 (47%), Gaps = 30/323 (9%)

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R    PN+ TYN L++G C VG +++       ++ +G  P+V TY  ++D +CK+GR
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA  LL     +G+ PN++++N + NG C+EG+  +   +L+ M  +   PD+++Y+T
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC------------------- 341
           LLNG  K G    A+ I  EMVR G         +L+  +C                   
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 342 -----------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                      +  +  + LL +AY++  +MT+        TY   I      ++ +EAL
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             +   +E G  P  ++++ +I   C +G++D+A  +   M E    P   +Y  LI  L
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            ++ +  +AC L    L  G+ P
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPP 323



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 142/298 (47%), Gaps = 15/298 (5%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   I + + + G + SV  +N  +    +L   E A+    E    GLAP+  ++S 
Sbjct: 201 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 260

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C K +   A ++   M + G  P+  T++ L+  LC+  RL EA ++  +M  +G
Sbjct: 261 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 320

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY  L+   C  G + +A  +   + + G  PD  TY+ +++G  K  R+ EA 
Sbjct: 321 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 380

Query: 246 ELLNEAIERGVTPNVVTFNTLFN---------------GYCKEGTPMKGVGLLKLMKKRN 290
            LL + I     P+ VT++TL                 G+C +G   +   + + M +RN
Sbjct: 381 RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 440

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
             P +  Y+ +++G  + G +  A +++KEM+  GF      + +L++ L  +   E+
Sbjct: 441 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE 498



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/215 (19%), Positives = 77/215 (35%), Gaps = 50/215 (23%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L  +     A     E    GL P+ +T++ +I  YC + D  +A  + D M 
Sbjct: 293 YSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI 352

Query: 148 DNGYHPNVTTFTILVNSL------------------------------------------ 165
             G+ P+  T+++L+N L                                          
Sbjct: 353 HKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKS 412

Query: 166 --------CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
                   C  G + EA  V + M     KP    YN ++ G C  G + +A+ +   + 
Sbjct: 413 VVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMI 472

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           + G  P   T   ++    K G + E  E++ + +
Sbjct: 473 HSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL 507


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 200/386 (51%), Gaps = 8/386 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++       + + A +  +E     + P+++T++ +IR  C +     A  V+D M 
Sbjct: 3   YNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                P+V T+TIL+ + CK    K+A+++LD+M   GC P+I TYN ++ G+C  GRV+
Sbjct: 60  RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A E L N+ + G +P+  +Y  V+ G C   R  +A EL+ E  ++G  PNVVTFN L 
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +  C++G     + +L+ + K  C P+ +SY+ LL+   K  K+  A++    MV  G  
Sbjct: 180 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 239

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    N+LL  LC +S E    +E  +Q+ +K    V +    +Y  VI  L K  KT 
Sbjct: 240 PDIVSYNTLLTALC-RSGEVDVAVELLHQLKDKGCAPVLI----SYNTVIDGLTKAGKTK 294

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EAL  L+  +  G  P  IT++ +   LC E +I+ A+     + +    P+   Y+ +I
Sbjct: 295 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 354

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L +  +++ A  L+   +  G +P
Sbjct: 355 LGLCKRRETHSAIDLFAYMIGNGCMP 380



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 187/363 (51%), Gaps = 5/363 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L        A+    E       P+  T++I++   C ++ + +A K++D M 
Sbjct: 35  YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 94

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  P++ T+ ++VN +C+ GR+ +A+E L  +   GC+PN  +YN +LKGLC   R E
Sbjct: 95  DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 154

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A E++  +   G  P+V T+  ++   C+ G    A+E+L +  + G TPN +++N L 
Sbjct: 155 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 214

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           + +CK+    K +  L LM  R C PD +SY+TLL  L + G++  AV +  ++   G  
Sbjct: 215 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 274

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N+++ GL  K+ + K+ LE    +  +M  K    D  TY  +   L +  + +
Sbjct: 275 PVLISYNTVIDGL-TKAGKTKEALE----LLNEMVSKGLQPDIITYSTIAAGLCREDRIE 329

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A+       +MG  P T+ +N +I  LC   +   A+ L   M  +  +P+ ++Y +LI
Sbjct: 330 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 389

Query: 448 TKL 450
             L
Sbjct: 390 EGL 392



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 166/320 (51%), Gaps = 5/320 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S  K+ + + D ++  G    +  +N ++  +      + A++F     SYG  PN+ 
Sbjct: 79  KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 138

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I+++  C    + +A +++  M   G  PNV TF +L++ LC+ G ++ ALEVL+Q+
Sbjct: 139 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 198

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC PN  +YN LL   C   ++++A   L  + + G  PD+ +Y  ++   C+ G  
Sbjct: 199 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 258

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ELL++  ++G  P ++++NT+ +G  K G   + + LL  M  +   PD I+YST+
Sbjct: 259 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 318

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
             GL +  +I  A+  F ++   G   +  + N+++ GLC +          A  +F  M
Sbjct: 319 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS-----AIDLFAYM 373

Query: 362 TKKVSVTDPGTYGIVIRTLG 381
                + +  TY I+I  L 
Sbjct: 374 IGNGCMPNESTYTILIEGLA 393



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 135/259 (52%), Gaps = 1/259 (0%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   + + G   +V  FN L+  L      E A++   +   YG  PNS +++ ++  +
Sbjct: 158 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 217

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +    +A   +D M   G +P++ ++  L+ +LC+SG +  A+E+L Q+   GC P +
Sbjct: 218 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 277

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +YN ++ GL   G+ +EA E+L  + + GL+PD+ TY+ +  G C+  R  +A+    +
Sbjct: 278 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 337

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             + G+ PN V +N +  G CK       + L   M    C+P++ +Y+ L+ GL   G 
Sbjct: 338 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 397

Query: 311 IRPAVSIFKEMV-RFGFEV 328
           I+ A  +  E+  R G E+
Sbjct: 398 IKEARDLLDELCSRAGEEI 416



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 106/205 (51%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ + I K G   +   +N LL A     + + A+ F     S G  P+  +++ ++  
Sbjct: 192 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 251

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C   +   A +++  + D G  P + ++  +++ L K+G+ KEALE+L++M   G +P+
Sbjct: 252 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 311

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           I TY+ +  GLC   R+E+A      V++ G++P+   Y A++ G CK   ++ A++L  
Sbjct: 312 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 371

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEG 274
             I  G  PN  T+  L  G   EG
Sbjct: 372 YMIGNGCMPNESTYTILIEGLAYEG 396



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 8/238 (3%)

Query: 26  FNKLVVFAAASLSTAESLDLKEN-------PRSLQAQRFVDRI-KASPLKERIDIFDSIK 77
           FN L+ F         +L++ E        P SL     +    K   + + +   D + 
Sbjct: 175 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 234

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
             G    +  +N LL AL    E + AV+   +    G AP   +++ +I          
Sbjct: 235 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 294

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA ++++ M   G  P++ T++ +   LC+  R+++A+    ++  +G +PN   YN ++
Sbjct: 295 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 354

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
            GLC       A ++   +  +G  P+  TYT +++G    G   EA +LL+E   R 
Sbjct: 355 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 197/408 (48%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   + +F+ + K+G   +   ++ L+  L        A     E   +G+ P + T + 
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            I   C+   + +A ++   M + G  PNV T+T L++ LC SG LK A+ +  +M R G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TYN L+  L    R++ A+ +L  +  +G  P++ TY  ++ G+C +G   +AM
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            ++N  ++RG + N+VT+NT+  GYC  G     + +L LM+   C PD+ SY+ L+ G 
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  K+  A  +F EMV  G   +E    +L+ G C     + + L+ A  + E M +  
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC-----KDEKLDTATSLLEHMKRSG 560

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY ++I  L K      A       IE G  P  +T+  +I  LC  G    AL
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   M E   +P+  +Y  LI  L Q  K  +A  L+    + G+IP
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP 668



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 194/417 (46%), Gaps = 29/417 (6%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K+ + + +++ + G + ++  +N ++          +A++        G  P+ W+++ +
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I  +C  +    A  + + M D+G  PN  T+T L++  CK  +L  A  +L+ M R GC
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +PN+QTYN L+ GL        A E+   +  +G+ P+V TYTA++DG CK G ++ A+E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           + N+ IE+G  PN++T+++L     +EG   +   L   +++   +PD+I+Y  ++   +
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL--------------------CMKSWE 346
             GK+  A +    M++ G +        L++GL                    C   ++
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 741

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPG----TYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
             D  +DA  V   M+ K++  DPG        ++  L    +  EA   L   I  G  
Sbjct: 742 TTD--QDAVSV---MSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC 796

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           P    +N+++ +L     +D A+ +   M           Y  LI  L QL +  +A
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 197/448 (43%), Gaps = 55/448 (12%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK  I +F  + +DG   +   +N L+  LV     + A    +     G +PN  T++ 
Sbjct: 371 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI+ YC   D  +A  V++ M   G+  N+ T+  ++   C SG    AL +LD M   G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CKP+  +Y  L+ G C + ++E A+ +   + +DGL P+  TYTA++DG+CK  + + A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 246 ELLNEA-----------------------------------IERGVTPNVVTFNTLFNGY 270
            LL                                      IE G+ PNVVT+  + +G 
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G+    + +   M ++ CLP+ ++YS+L+  L + GK+  A ++F E+ R G   DE
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL-GKGKKTDEA 389
                ++    M        +E A+    +M K        TYG++I+ L  +    D+ 
Sbjct: 671 ITYVKMIEAYIMSGK-----VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 725

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGE-GKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           L  L   +         T  + +  +  +  ++D  L             S    + L++
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL-------------SVQVQNALVS 772

Query: 449 KLDQLEKSYDACALYGAALKQGVIPQRK 476
            L    + ++A  L G+ + QG+ P ++
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQE 800



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 167/386 (43%), Gaps = 46/386 (11%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+   +K         +D +  +G    +  ++ L+  L + G     ++   +M   G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+  YN ++  LC  G V +A  ++  V    + PD +TYT+++ G C+    + A+
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL-------------------- 285
           ++ N+  + G  PN VT++TL NG C  G   +   L++                     
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 286 ---------------MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
                          MK + C P+  +Y+ L++GL   G ++ A+ +F  M R G   + 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR---TLGKGKKTD 387
              N+L+  L      E   ++ A+ V   M +     +  TY  +I+    LG  KK  
Sbjct: 391 VTYNALINILV-----ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK-- 443

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            A++ +++ ++ GH    +T+N +I+  C  G    AL +L LM +    P   SY  LI
Sbjct: 444 -AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               ++ K   A  L+   +  G+ P
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCP 528



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 147/357 (41%), Gaps = 29/357 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L     + + +K+ G   +V  +N L+  L   N    A +        G+ PN  
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ MI   C       A ++ + M + G  PN+ T++ L+ +L + G+++EA  +  ++
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF------ 235
            R G  P+  TY  +++     G+VE A+  L  +   G +P ++TY  ++ G       
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLL 721

Query: 236 --------------CKVG---RSNEAMELLNEAI-ERGVTPNVVTFNTLFNGYCKEGTPM 277
                         C  G      +A+ +++  + E     +V   N L +     G   
Sbjct: 722 ADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWF 781

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   LL  M  +   PD+ +Y++LL  LL+   +  A+ +FK M   G EV       L+
Sbjct: 782 EANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELI 841

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
             LC     +    ++A   FE M  +    D     ++I  L +    D  +  LH
Sbjct: 842 CALC-----QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH 893



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 32/264 (12%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E  ++F  +++ G       +  ++ A +M  + E A  F       G  P  WT+ +
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710

Query: 126 MIRCYCNKNDFFEARK--------VIDCMFDNGYHP--------------------NVTT 157
           +I+    KN++  A +        V +C F  GY                      +V  
Sbjct: 711 LIKGL--KNEYLLADQRLAALPDVVPNCSF--GYQTTDQDAVSVMSAKLAELDPGLSVQV 766

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
              LV++L  +GR  EA E+L  M   G  P+ + YN LL  L  V  V+ A  +  ++ 
Sbjct: 767 QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G +  +  Y  ++   C++ R  EA       + R   P+ V    L +G  ++G   
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 886

Query: 278 KGVGLLKLMKKRNCLPDKISYSTL 301
             +  L +M+ R  +P    Y+ L
Sbjct: 887 LCMEFLHIMETRRYMPSFHIYTIL 910


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 187/344 (54%), Gaps = 10/344 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN  T+S++I CYC   +  E   +++ M   G   +V  ++ L+++ C  G ++   E+
Sbjct: 183 PNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGREL 242

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
            D+M R    PN+ TY+CL++GL   GR  EA EML ++   G++PDV  YT + DG CK
Sbjct: 243 FDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCK 302

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            GR+ +A+++L+  +++G  P  +T+N + NG CKE       G++++M K+   PD ++
Sbjct: 303 NGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVT 362

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV--DERMMNSLLRGLCMKSWEEKDLLEDAY 355
           Y+TLL GL   GKI  A+ ++K ++   F V  D    N+L++GLC     ++  + DA 
Sbjct: 363 YNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLC-----KEGRVHDAA 417

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++   M +     +  TY  +I      +K  EAL    +A+E G  P ++T++ +I  L
Sbjct: 418 RIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGL 477

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKS 456
           C    +  A  L   M +    P+   Y+ L+T L   D LE++
Sbjct: 478 CKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQA 521



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 183/379 (48%), Gaps = 7/379 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++FD + +   + +V  ++ L+  L        A +   + ++ G+ P+   ++++    
Sbjct: 241 ELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGL 300

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A KV+D M   G  P   T+ ++VN LCK  R+ +A  V++ M + G KP+ 
Sbjct: 301 CKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDA 360

Query: 191 QTYNCLLKGLCYVGRVEEAYEM--LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
            TYN LLKGLC  G++ EA ++  L+  +   +KPDV+T   ++ G CK GR ++A  + 
Sbjct: 361 VTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIH 420

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +  +E G+  N+VT+N L  GY      ++ + L K   +    P+ ++YS ++NGL K 
Sbjct: 421 SSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKM 480

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
             +  A  +F +M   G        N+L+  LC      +D LE A  +F++M       
Sbjct: 481 QMLSVARGLFCKMKDSGIRPTVIDYNALMTSLC-----REDSLEQARSLFQEMRNVNHNV 535

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  ++ I+I    K      A   L     M  +P  +TF+ +I      G +D+A+ L 
Sbjct: 536 DVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLY 595

Query: 429 FLMYEHAKIPSRTSYDMLI 447
             M     +P    +D L+
Sbjct: 596 EKMVSCGHVPGVVVFDSLL 614



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 201/419 (47%), Gaps = 17/419 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  + E + + + ++++G    V  ++ L+ A     + ET  + F E     ++PN  
Sbjct: 197 KSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVV 256

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +++       + EA +++  M   G  P+V  +T+L + LCK+GR  +A++VLD M
Sbjct: 257 TYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLM 316

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G +P   TYN ++ GLC   R+++A+ ++  +   G KPD  TY  ++ G C  G+ 
Sbjct: 317 VQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKI 376

Query: 242 NEAME----LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           +EAM+    LL+E     V P+V T N L  G CKEG       +   M +     + ++
Sbjct: 377 HEAMDLWKLLLSEKFH--VKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVT 434

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+ L+ G L   K+  A+ ++K  V  GF  +    + ++ GLC     +  +L  A  +
Sbjct: 435 YNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLC-----KMQMLSVARGL 489

Query: 358 FEKMTK---KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           F KM     + +V D   Y  ++ +L +    ++A         + H    ++FN +I  
Sbjct: 490 FCKMKDSGIRPTVID---YNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDG 546

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               G +  A  LL  M+    +P   ++ +LI +  +L    +A  LY   +  G +P
Sbjct: 547 TLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVP 605



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 183/414 (44%), Gaps = 45/414 (10%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           + +  V  + +  S  + P   + S +   + N +    A  V+  M   G+  NV    
Sbjct: 57  QYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLN 116

Query: 160 ILVNSLCKSGRLKEALEVLDQMGR------------------------------------ 183
           +++   C+SG+  +A+ +  QM R                                    
Sbjct: 117 LVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMK 176

Query: 184 --IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C+PN+ TY+ L+   C  G V E   +L  ++ +GLK DV+ Y++++  FC  G  
Sbjct: 177 KGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDI 236

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
               EL +E + R V+PNVVT++ L  G  + G   +   +LK M  R   PD ++Y+ L
Sbjct: 237 ETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVL 296

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            +GL K G+   A+ +   MV+ G E      N ++ GLC     ++D ++DA+ V E M
Sbjct: 297 ADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLC-----KEDRMDDAFGVVEMM 351

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI-EMGHI-PRTITFNNVIQALCGEG 419
            KK    D  TY  +++ L    K  EA+      + E  H+ P   T NN+IQ LC EG
Sbjct: 352 VKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEG 411

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++  A  +   M E     +  +Y+ LI       K  +A  L+  A++ G  P
Sbjct: 412 RVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSP 465



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 5/284 (1%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N+L+  L        A +  S     GL  N  T++ +I  Y       EA K+     +
Sbjct: 401 NNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVE 460

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           +G+ PN  T+++++N LCK   L  A  +  +M   G +P +  YN L+  LC    +E+
Sbjct: 461 SGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQ 520

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +   ++N     DV ++  ++DG  K G    A ELL+E     + P+ VTF+ L N
Sbjct: 521 ARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILIN 580

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
            + K G   + +GL + M     +P  + + +LL G    G+    +S+  +M      +
Sbjct: 581 RFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVL 640

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
           D ++ +++L  LC  S   ++L  D  ++  K +++   T  GT
Sbjct: 641 DSKLTSTILACLCHMS---RNL--DVEKILPKFSQQSEHTSKGT 679



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 158/325 (48%), Gaps = 10/325 (3%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P+    + L+++L K+ +    + V  +M      P   + + L +          A+ +
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG---VTPNVVTFNTLFNG 269
           L  +   G   +VY    V+ GFC+ G+ ++AM L ++ ++R    V P+ VT+NTL NG
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQ-MKRNYDCVVPDCVTYNTLVNG 158

Query: 270 YCKEGTPMKGVGLLKLMKK-RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           +CK     +   L + MKK  +C P+ ++YS L++   K G++   + + +EM R G + 
Sbjct: 159 FCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKA 218

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D  + +SL+   C     E D +E   ++F++M ++    +  TY  +++ LG+  +  E
Sbjct: 219 DVFVYSSLISAFC----GEGD-IETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWRE 273

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   L      G  P  + +  +   LC  G+   A+ +L LM +  + P   +Y++++ 
Sbjct: 274 ASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVN 333

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L + ++  DA  +    +K+G  P
Sbjct: 334 GLCKEDRMDDAFGVVEMMVKKGKKP 358



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 139/305 (45%), Gaps = 3/305 (0%)

Query: 47  ENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAV 105
           E P +L     V+ + K   + +   + + + K G       +N LL  L    +   A+
Sbjct: 321 EEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAM 380

Query: 106 KFFSE--ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
             +    +  + + P+ +T + +I+  C +    +A ++   M + G   N+ T+  L+ 
Sbjct: 381 DLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIE 440

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
               + +L EAL++       G  PN  TY+ ++ GLC +  +  A  +   +K+ G++P
Sbjct: 441 GYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRP 500

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            V  Y A+M   C+     +A  L  E        +VV+FN + +G  K G       LL
Sbjct: 501 TVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELL 560

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M   + +PD +++S L+N   K G +  A+ ++++MV  G      + +SLL+G  +K
Sbjct: 561 SEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLK 620

Query: 344 SWEEK 348
              EK
Sbjct: 621 GETEK 625



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 116/234 (49%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I  S+ + G   ++  +N L+   +   +   A+K +  A   G +PNS T+S+MI   C
Sbjct: 419 IHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLC 478

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  AR +   M D+G  P V  +  L+ SLC+   L++A  +  +M  +    ++ 
Sbjct: 479 KMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVV 538

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           ++N ++ G    G V+ A E+L  +    L PD  T++ +++ F K+G  +EAM L  + 
Sbjct: 539 SFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKM 598

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +  G  P VV F++L  GY  +G   K + LL  M  ++ + D    ST+L  L
Sbjct: 599 VSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACL 652



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 83/177 (46%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  +K  G   +V D+N L+ +L   +  E A   F E  +     +  +F+I+I    
Sbjct: 489 LFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTL 548

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              D   A++++  MF     P+  TF+IL+N   K G L EA+ + ++M   G  P + 
Sbjct: 549 KAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVV 608

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
            ++ LLKG    G  E+   +L  + +  +  D    + ++   C + R+ +  ++L
Sbjct: 609 VFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKIL 665



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 63/144 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   L++   +F  ++    N  V  FN ++   +   + ++A +  SE     L P++ 
Sbjct: 514 REDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAV 573

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFSI+I  +       EA  + + M   G+ P V  F  L+      G  ++ + +L QM
Sbjct: 574 TFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQM 633

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGR 205
                  + +  + +L  LC++ R
Sbjct: 634 ADKDVVLDSKLTSTILACLCHMSR 657


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 197/408 (48%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   + +F+ + K+G   +   ++ L+  L        A     E   +G+ P + T + 
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            I   C+   + +A ++   M + G  PNV T+T L++ LC SG LK A+ +  +M R G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TYN L+  L    R++ A+ +L  +  +G  P++ TY  ++ G+C +G   +AM
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            ++N  ++RG + N+VT+NT+  GYC  G     + +L LM+   C PD+ SY+ L+ G 
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  K+  A  +F EMV  G   +E    +L+ G C     + + L+ A  + E M +  
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC-----KDEKLDTATSLLEHMKRSG 560

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY ++I  L K      A       IE G  P  +T+  +I  LC  G    AL
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   M E   +P+  +Y  LI  L Q  K  +A  L+    + G+IP
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP 668



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 194/417 (46%), Gaps = 29/417 (6%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K+ + + +++ + G + ++  +N ++          +A++        G  P+ W+++ +
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I  +C  +    A  + + M D+G  PN  T+T L++  CK  +L  A  +L+ M R GC
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +PN+QTYN L+ GL        A E+   +  +G+ P+V TYTA++DG CK G ++ A+E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           + N+ IE+G  PN++T+++L     +EG   +   L   +++   +PD+I+Y  ++   +
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL--------------------CMKSWE 346
             GK+  A +    M++ G +        L++GL                    C   ++
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 741

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPG----TYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
             D  +DA  V   M+ K++  DPG        ++  L    +  EA   L   I  G  
Sbjct: 742 TTD--QDAVSV---MSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC 796

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           P    +N+++ +L     +D A+ +   M           Y  LI  L QL +  +A
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 197/448 (43%), Gaps = 55/448 (12%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK  I +F  + +DG   +   +N L+  LV     + A    +     G +PN  T++ 
Sbjct: 371 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI+ YC   D  +A  V++ M   G+  N+ T+  ++   C SG    AL +LD M   G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CKP+  +Y  L+ G C + ++E A+ +   + +DGL P+  TYTA++DG+CK  + + A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 246 ELLNEA-----------------------------------IERGVTPNVVTFNTLFNGY 270
            LL                                      IE G+ PNVVT+  + +G 
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G+    + +   M ++ CLP+ ++YS+L+  L + GK+  A ++F E+ R G   DE
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL-GKGKKTDEA 389
                ++    M        +E A+    +M K        TYG++I+ L  +    D+ 
Sbjct: 671 ITYVKMIEAYIMSGK-----VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 725

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGE-GKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           L  L   +         T  + +  +  +  ++D  L             S    + L++
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL-------------SVQVQNALVS 772

Query: 449 KLDQLEKSYDACALYGAALKQGVIPQRK 476
            L    + ++A  L G+ + QG+ P ++
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQE 800



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 167/386 (43%), Gaps = 46/386 (11%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+   +K         +D +  +G    +  ++ L+  L + G     ++   +M   G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+  YN ++  LC  G V +A  ++  V    + PD +TYT+++ G C+    + A+
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL-------------------- 285
           ++ N+  + G  PN VT++TL NG C  G   +   L++                     
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 286 ---------------MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
                          MK + C P+  +Y+ L++GL   G ++ A+ +F  M R G   + 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNT 390

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR---TLGKGKKTD 387
              N+L+  L      E   ++ A+ V   M +     +  TY  +I+    LG  KK  
Sbjct: 391 VTYNALINILV-----ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK-- 443

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            A++ +++ ++ GH    +T+N +I+  C  G    AL +L LM +    P   SY  LI
Sbjct: 444 -AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               ++ K   A  L+   +  G+ P
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCP 528



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 147/357 (41%), Gaps = 29/357 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L     + + +K+ G   +V  +N L+  L   N    A +        G+ PN  
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ MI   C       A ++ + M + G  PN+ T++ L+ +L + G+++EA  +  ++
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF------ 235
            R G  P+  TY  +++     G+VE A+  L  +   G +P ++TY  ++ G       
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLL 721

Query: 236 --------------CKVG---RSNEAMELLNEAI-ERGVTPNVVTFNTLFNGYCKEGTPM 277
                         C  G      +A+ +++  + E     +V   N L +     G   
Sbjct: 722 ADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWF 781

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   LL  M  +   PD+ +Y++LL  LL+   +  A+ +FK M   G EV       L+
Sbjct: 782 EANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELI 841

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
             LC     +    ++A   FE M  +    D     ++I  L +    D  +  LH
Sbjct: 842 CALC-----QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH 893



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 32/264 (12%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E  ++F  +++ G       +  ++ A +M  + E A  F       G  P  WT+ +
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710

Query: 126 MIRCYCNKNDFFEARK--------VIDCMFDNGYHP--------------------NVTT 157
           +I+    KN++  A +        V +C F  GY                      +V  
Sbjct: 711 LIKGL--KNEYLLADQRLAALPDVVPNCSF--GYQTTDQDAVSVMSAKLAELDPGLSVQV 766

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
              LV++L  +GR  EA E+L  M   G  P+ + YN LL  L  V  V+ A  +  ++ 
Sbjct: 767 QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G +  +  Y  ++   C++ R  EA       + R   P+ V    L +G  ++G   
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 886

Query: 278 KGVGLLKLMKKRNCLPDKISYSTL 301
             +  L +M+ R  +P    Y+ L
Sbjct: 887 LCMEFLHIMETRRYMPSFHIYTIL 910


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 195/393 (49%), Gaps = 6/393 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K  +++ D + ++G +  +  +N L+  L  L E + AVK  ++      +PN+ 
Sbjct: 313 KTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTV 372

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C +N   EA K+   +   G  P+V T+  L+  LC S     A+E+  +M
Sbjct: 373 TYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEM 432

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P+  TYN L+  LC+ G+++EA  +L  ++  G   +V TY  ++DGFCK  R 
Sbjct: 433 KTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRI 492

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA E+ ++   +GV+ N VT+NTL +G CK     +   L+  M      PDK +Y++L
Sbjct: 493 AEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSL 552

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L    K G I+ A  I + M   G E D     +L+ GLC     +   +E A ++   +
Sbjct: 553 LTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLC-----KAGRVEAATKLLRTI 607

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC-GEGK 420
             K     P  Y  VI+ L + K++ EA+      IE    P  +T+  V + LC G G 
Sbjct: 608 QMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGP 667

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
           I +A+  +  M E   +P  +S+ ML   L  L
Sbjct: 668 IGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSL 700



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 194/371 (52%), Gaps = 8/371 (2%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    VS FN L+ AL   ++   A+    E   +GL P+  TF+ +++ +  + +   A
Sbjct: 190 GIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGA 249

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG-RIGCKPNIQTYNCLLK 198
            +V + M + G      T  +LVN  CK GR++EAL  +++M  R G  P+  T+N L+ 
Sbjct: 250 MRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVN 309

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GL   G V+ A E++  +  +G  PD+YTY +++ G CK+G  +EA+++LN+ IER  +P
Sbjct: 310 GLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSP 369

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           N VT+NT+ +  CKE    +   L  ++  +  LPD  +Y++L+ GL        A+ ++
Sbjct: 370 NTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELY 429

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           KEM   G   DE   N L+  LC +       L++A  + ++M       +  TY  +I 
Sbjct: 430 KEMKTKGCHPDEFTYNMLIDSLCFRGK-----LQEALNLLKEMEVSGCARNVITYNTLID 484

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPR-TITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
              K K+  EA   +   +E+  + R ++T+N +I  LC   ++++A  L+  M      
Sbjct: 485 GFCKNKRIAEAE-EIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLR 543

Query: 438 PSRTSYDMLIT 448
           P + +Y+ L+T
Sbjct: 544 PDKFTYNSLLT 554



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 186/373 (49%), Gaps = 6/373 (1%)

Query: 102 ETAVKFFSEAS-SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           E A++F  E S   G  P+ +TF++++           A +V+D M   G+ P++ T+  
Sbjct: 282 EEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNS 341

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L++ LCK G + EA++VL+QM    C PN  TYN ++  LC   +VEEA ++ + +   G
Sbjct: 342 LISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKG 401

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + PDV TY +++ G C       AMEL  E   +G  P+  T+N L +  C  G   + +
Sbjct: 402 ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEAL 461

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            LLK M+   C  + I+Y+TL++G  K  +I  A  IF +M   G   +    N+L+ GL
Sbjct: 462 NLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGL 521

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     + + +E+A Q+ ++M  +    D  TY  ++    K     +A   +      G
Sbjct: 522 C-----KSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG 576

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
             P  +T+  +I  LC  G+++ A  LL  +       +  +Y+ +I  L + ++S +A 
Sbjct: 577 CEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAV 636

Query: 461 ALYGAALKQGVIP 473
            L+   +++   P
Sbjct: 637 RLFREMIEKAEAP 649



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 161/328 (49%), Gaps = 7/328 (2%)

Query: 125 IMIRCYCNKNDFFEARKVIDCM-FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + I  Y +   + E  + +D M  + G   N   +  L+N L    +LK        M  
Sbjct: 129 VFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVS 188

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            G +P++ T+N L+K LC   ++  A  ++  +++ GL PD  T+T +M GF + G  + 
Sbjct: 189 RGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDG 248

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLL 302
           AM +  + +E G     VT N L NG+CKEG   + +  ++ M  R    PDK +++ L+
Sbjct: 249 AMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLV 308

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           NGL K G ++ A+ +   M+R GF+ D    NSL+ GLC K  E    +++A +V  +M 
Sbjct: 309 NGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLC-KLGE----VDEAVKVLNQMI 363

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           ++    +  TY  +I TL K  + +EA          G +P   T+N++IQ LC      
Sbjct: 364 ERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHT 423

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKL 450
            A+ L   M      P   +Y+MLI  L
Sbjct: 424 VAMELYKEMKTKGCHPDEFTYNMLIDSL 451


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 197/408 (48%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   + +F+ + K+G   +   ++ L+  L        A     E   +G+ P + T + 
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            I   C+   + +A ++   M + G  PNV T+T L++ LC SG LK A+ +  +M R G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TYN L+  L    R++ A+ +L  +  +G  P++ TY  ++ G+C +G   +AM
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            ++N  ++RG + N+VT+NT+  GYC  G     + +L LM+   C PD+ SY+ L+ G 
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  K+  A  +F EMV  G   +E    +L+ G C     + + L+ A  + E M +  
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC-----KDEKLDTATSLLEHMKRSG 560

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY ++I  L K      A       IE G  P  +T+  +I  LC  G    AL
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   M E   +P+  +Y  LI  L Q  K  +A  L+    + G+IP
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP 668



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 194/417 (46%), Gaps = 29/417 (6%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K+ + + +++ + G + ++  +N ++          +A++        G  P+ W+++ +
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I  +C  +    A  + + M D+G  PN  T+T L++  CK  +L  A  +L+ M R GC
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +PN+QTYN L+ GL        A E+   +  +G+ P+V TYTA++DG CK G ++ A+E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           + N+ IE+G  PN++T+++L     +EG   +   L   +++   +PD+I+Y  ++   +
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL--------------------CMKSWE 346
             GK+  A +    M++ G +        L++GL                    C   ++
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 741

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPG----TYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
             D  +DA  V   M+ K++  DPG        ++  L    +  EA   L   I  G  
Sbjct: 742 TTD--QDAVSV---MSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC 796

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           P    +N+++ +L     +D A+ +   M           Y  LI  L QL +  +A
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 197/448 (43%), Gaps = 55/448 (12%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK  I +F  + +DG   +   +N L+  LV     + A    +     G +PN  T++ 
Sbjct: 371 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI+ YC   D  +A  V++ M   G+  N+ T+  ++   C SG    AL +LD M   G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CKP+  +Y  L+ G C + ++E A+ +   + +DGL P+  TYTA++DG+CK  + + A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 246 ELLNEA-----------------------------------IERGVTPNVVTFNTLFNGY 270
            LL                                      IE G+ PNVVT+  + +G 
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G+    + +   M ++ CLP+ ++YS+L+  L + GK+  A ++F E+ R G   DE
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL-GKGKKTDEA 389
                ++    M        +E A+    +M K        TYG++I+ L  +    D+ 
Sbjct: 671 ITYVKMIEAYIMSGK-----VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 725

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGE-GKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           L  L   +         T  + +  +  +  ++D  L             S    + L++
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL-------------SVQVQNALVS 772

Query: 449 KLDQLEKSYDACALYGAALKQGVIPQRK 476
            L    + ++A  L G+ + QG+ P ++
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQE 800



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 162/369 (43%), Gaps = 46/369 (12%)

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           +D +  +G    +  ++ L+  L + G     ++   +M   G +PN+  YN ++  LC 
Sbjct: 168 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 227

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            G V +A  ++  V    + PD +TYT+++ G C+    + A+++ N+  + G  PN VT
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287

Query: 263 FNTLFNGYCKEGTPMKGVGLLKL-----------------------------------MK 287
           ++TL NG C  G   +   L++                                    MK
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            + C P+  +Y+ L++GL   G ++ A+ +F  M R G   +    N+L+  L      E
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV-----E 402

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR---TLGKGKKTDEALIHLHHAIEMGHIPR 404
              ++ A+ V   M +     +  TY  +I+    LG  KK   A++ +++ ++ GH   
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK---AMLVMNNMLQRGHSAN 459

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            +T+N +I+  C  G    AL +L LM +    P   SY  LI    ++ K   A  L+ 
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN 519

Query: 465 AALKQGVIP 473
             +  G+ P
Sbjct: 520 EMVDDGLCP 528



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 147/357 (41%), Gaps = 29/357 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L     + + +K+ G   +V  +N L+  L   N    A +        G+ PN  
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ MI   C       A ++ + M + G  PN+ T++ L+ +L + G+++EA  +  ++
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF------ 235
            R G  P+  TY  +++     G+VE A+  L  +   G +P ++TY  ++ G       
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLL 721

Query: 236 --------------CKVG---RSNEAMELLNEAI-ERGVTPNVVTFNTLFNGYCKEGTPM 277
                         C  G      +A+ +++  + E     +V   N L +     G   
Sbjct: 722 ADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWF 781

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   LL  M  +   PD+ +Y++LL  LL+   +  A+ +FK M   G EV       L+
Sbjct: 782 EANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELI 841

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
             LC     +    ++A   FE M  +    D     ++I  L +    D  +  LH
Sbjct: 842 CALC-----QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH 893



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 32/264 (12%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E  ++F  +++ G       +  ++ A +M  + E A  F       G  P  WT+ +
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710

Query: 126 MIRCYCNKNDFFEARK--------VIDCMFDNGYHP--------------------NVTT 157
           +I+    KN++  A +        V +C F  GY                      +V  
Sbjct: 711 LIKGL--KNEYLLADQRLAALPDVVPNCSF--GYQTTDQDAVSVMSAKLAELDPGLSVQV 766

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
              LV++L  +GR  EA E+L  M   G  P+ + YN LL  L  V  V+ A  +  ++ 
Sbjct: 767 QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G +  +  Y  ++   C++ R  EA       + R   P+ V    L +G  ++G   
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 886

Query: 278 KGVGLLKLMKKRNCLPDKISYSTL 301
             +  L +M+ R  +P    Y+ L
Sbjct: 887 LCMEFLHIMETRRYMPSFHIYTIL 910



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 66/156 (42%)

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           +FEA +++  M   G  P+   +  L+ SL +   +  A+ V   M   GC+ ++  Y  
Sbjct: 780 WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+  LC + R +EA     N+      PD      ++DG  + G  +  ME L+    R 
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 899

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
             P+   +  L     K+ +     G +  +K+  C
Sbjct: 900 YMPSFHIYTILAREASKKRSWKHVAGCITKVKRATC 935


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 199/406 (49%), Gaps = 7/406 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D + K G +   + +N LL+     +    A + F E  S G+ P+  +FS +I    
Sbjct: 189 VLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLS 248

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A K    M + G  P+   +TIL+   C++G + EAL+V D+M   GC  ++ 
Sbjct: 249 KNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVV 308

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN +L GLC    + EA E+   +   G+ PD YT+T +++G+ K G  N+A+ L    
Sbjct: 309 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 368

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVG-LLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
           I+R + P+VVT+NTL +G+CK G+ M+ V  L   M  R   P+ ISY  L+NG    G 
Sbjct: 369 IQRNLKPDVVTYNTLIDGFCK-GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 427

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A  ++ EMV  GFE      N++++G C      K     A +    M  K  V D 
Sbjct: 428 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK-----ADEFLSNMLLKGIVPDG 482

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I    K +  D A   ++     G +P  IT+N ++     +G++ +A L++  
Sbjct: 483 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 542

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           M E    P R++Y  LI          +A  ++   L++G +P  K
Sbjct: 543 MIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 588



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 199/438 (45%), Gaps = 40/438 (9%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I+  + + G   +V   N ++ AL    + E    F S+    G+ P+  T++ +I  Y
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +    EA +++D M   G  P V T+  ++N LCK+G+   A  VLD+M +IG  P+ 
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 191 QTYNCLLKGLCYV-----------------------------------GRVEEAYEMLMN 215
            TYN LL   C                                     G +++A +   +
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +KN GL PD   YT ++ GFC+ G  +EA+++ +E +E+G   +VVT+NT+ NG CKE  
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   L   M +R   PD  +++TL+NG  K G +  AV++F+ M++   + D    N+
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 382

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+ G C  S  EK       +++  M  +    +  +YGI+I          EA      
Sbjct: 383 LIDGFCKGSEMEK-----VNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 437

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
            +E G     IT N +++  C  G   KA   L  M     +P   +Y+ LI    + E 
Sbjct: 438 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 497

Query: 456 SYDACALYGAALKQGVIP 473
              A AL       G++P
Sbjct: 498 MDRAFALVNKMENSGLLP 515



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 195/410 (47%), Gaps = 5/410 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++A  L+E  + F  +K  G   S++  N LL  LV +   + A + + E    G+  N 
Sbjct: 38  VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNV 97

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T +IMI   C        +  +  M + G  P+V T+  L+N+ C+ G L+EA E++D 
Sbjct: 98  YTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS 157

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G KP + TYN ++ GLC  G+   A  +L  +   G+ PD  TY  ++   C+   
Sbjct: 158 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 217

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  + +E   +GV P++V+F+ L     K G   + +   + MK     PD + Y+ 
Sbjct: 218 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 277

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+ G  + G +  A+ +  EM+  G  +D    N++L GLC     ++ +L +A ++F +
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLC-----KEKMLSEADELFTE 332

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           MT++    D  T+  +I    K    ++A+      I+    P  +T+N +I   C   +
Sbjct: 333 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 392

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           ++K   L   M      P+  SY +LI     +    +A  L+   +++G
Sbjct: 393 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 442



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 152/304 (50%), Gaps = 5/304 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D + + G    V  +N +L  L        A + F+E +  G+ P+ +TF+ 
Sbjct: 288 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 347

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  Y    +  +A  + + M      P+V T+  L++  CK   +++  E+ + M    
Sbjct: 348 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 407

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  +Y  L+ G C +G V EA+ +   +   G +  + T   ++ G+C+ G + +A 
Sbjct: 408 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 467

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E L+  + +G+ P+ +T+NTL NG+ KE    +   L+  M+    LPD I+Y+ +LNG 
Sbjct: 468 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 527

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G+++ A  I  +M+  G   D     SL+ G        ++ L++A++V ++M ++ 
Sbjct: 528 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHV-----TQNNLKEAFRVHDEMLQRG 582

Query: 366 SVTD 369
            V D
Sbjct: 583 FVPD 586



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 152/320 (47%), Gaps = 5/320 (1%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N   F +LV +  ++ +L+E  E    +   G   +I   N LL GL  VG V+ A+E+ 
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             V   G++ +VYT   +++  CK  +       L++  E+GV P+VVT+NTL N YC++
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +   L+  M  +   P   +Y+ ++NGL K GK   A  +  EM++ G   D    
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           N LL   C       D + DA ++F++M  +  V D  ++  +I  L K    D+AL + 
Sbjct: 206 NILLVECC-----RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 260

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
                 G  P  + +  +I   C  G + +AL +   M E   +    +Y+ ++  L + 
Sbjct: 261 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKE 320

Query: 454 EKSYDACALYGAALKQGVIP 473
           +   +A  L+    ++GV P
Sbjct: 321 KMLSEADELFTEMTERGVFP 340



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 159/371 (42%), Gaps = 41/371 (11%)

Query: 113 SYG-LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           +YG    N   F +++R Y       E  +    +   G   ++     L+  L K G +
Sbjct: 19  TYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWV 78

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
             A E+  ++ R G + N+ T N ++  LC   ++E     L +++  G+ PDV TY  +
Sbjct: 79  DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 138

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK--- 288
           ++ +C+ G   EA EL++    +G+ P V T+N + NG CK G  ++  G+L  M K   
Sbjct: 139 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 198

Query: 289 --------------------------------RNCLPDKISYSTLLNGLLKWGKIRPAVS 316
                                           +  +PD +S+S L+  L K G +  A+ 
Sbjct: 199 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 258

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
            F++M   G   D  +   L+ G C        ++ +A +V ++M ++  V D  TY  +
Sbjct: 259 YFRDMKNAGLAPDNVIYTILIGGFC-----RNGVMSEALKVRDEMLEQGCVLDVVTYNTI 313

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +  L K K   EA        E G  P   TF  +I     +G ++KA+ L  +M +   
Sbjct: 314 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 373

Query: 437 IPSRTSYDMLI 447
            P   +Y+ LI
Sbjct: 374 KPDVVTYNTLI 384



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 132/270 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E  ++F  + + G       F  L+           AV  F       L P+  
Sbjct: 319 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 378

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C  ++  +  ++ + M     +PN  ++ IL+N  C  G + EA  + D+M
Sbjct: 379 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 438

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +  I T N ++KG C  G   +A E L N+   G+ PD  TY  +++GF K    
Sbjct: 439 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 498

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A  L+N+    G+ P+V+T+N + NG+ ++G   +   ++  M +R   PD+ +Y++L
Sbjct: 499 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 558

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           +NG +    ++ A  +  EM++ GF  D++
Sbjct: 559 INGHVTQNNLKEAFRVHDEMLQRGFVPDDK 588



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 5/184 (2%)

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
           NC  + + +  L+   ++  K+R     F+ +   G  V     NSLL GL    W    
Sbjct: 22  NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGW---- 77

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            ++ A+++++++ +     +  T  I+I  L K +K +     L    E G  P  +T+N
Sbjct: 78  -VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYN 136

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I A C +G +++A  L+  M      P   +Y+ +I  L +  K   A  +    LK 
Sbjct: 137 TLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 196

Query: 470 GVIP 473
           G+ P
Sbjct: 197 GMSP 200


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 181/359 (50%), Gaps = 5/359 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL P   TF+ ++   C+K    +A K+ D M   G+ P+V T++ ++N LCK G    A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L++L +M   GCKPN+  YN ++  LC    V EA +    +  +G+ PDV+TY++++ G
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           FC +GR NEA  L  + +ER V PN VTF  L +G CK+    +   + + M ++   PD
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
             +Y+ L++G     ++  A  +F  M R G   + R  N L+ G C     +   +++A
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHC-----KSGRIDEA 239

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
             +  +M+ K    D  TY  ++R   +  +  EA   L      G +P  IT++ V+  
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LC  G +D+A  LL  M E    P+   Y +LI  +    K   A  L+     +G+ P
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQP 358



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 177/361 (49%), Gaps = 6/361 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + K   + E +D F  + K+G    V  ++ +L     L     A   
Sbjct: 78  PNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSL 137

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F +     + PN  TF+I+I   C K    EA  V + M + G  P+V T+  LV+  C 
Sbjct: 138 FKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCS 197

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
             ++ EA ++ + M R GC PN+++YN L+ G C  GR++EA  +L  + +  L PD++T
Sbjct: 198 RSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFT 257

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y+ +M GFC+VGR  EA ELL E    G+ PN++T++ + +G CK G   +   LLK M+
Sbjct: 258 YSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQ 317

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +    P+   Y+ L+ G+  +GK+  A  +F  +   G +        ++ GL      +
Sbjct: 318 ESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLL-----K 372

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
             L  +A ++F +M     + +  TY ++I+   +   T  A+  +   +  G    + T
Sbjct: 373 GGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSST 432

Query: 408 F 408
           F
Sbjct: 433 F 433



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 186/377 (49%), Gaps = 5/377 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +   +++ G   +V  +N ++ +L        A+ FFSE    G+ P+ +T+S ++  
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +CN     EA  +   M +    PN  TFTIL++ LCK   + EA  V + M   G +P+
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TYN L+ G C   +++EA ++   +   G  P+V +Y  +++G CK GR +EA  LL 
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E   + +TP++ T++TL  G+C+ G P +   LLK M     LP+ I+YS +L+GL K G
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +  A  + K M     E +  +   L+ G+C         LE A ++F  +  K     
Sbjct: 305 HLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGK-----LEAARELFSNLFVKGIQPT 359

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY ++I  L KG  ++EA          G +P + T+N +IQ     G    A+ L+ 
Sbjct: 360 VVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIE 419

Query: 430 LMYEHAKIPSRTSYDML 446
            M         +++ ML
Sbjct: 420 EMVGKGFSADSSTFRML 436



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 189/396 (47%), Gaps = 5/396 (1%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G   ++  FN LL  L    +   AVK F E    G  P+  T+S +I   C   +  
Sbjct: 3   KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
            A +++  M + G  PNV  +  +++SLCK   + EA++   +M + G  P++ TY+ +L
Sbjct: 63  MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G C +GRV EA  +   +    + P+  T+T ++DG CK    +EA  +     E+G+ 
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE 182

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+V T+N L +GYC      +   L  +M ++ C P+  SY+ L+NG  K G+I  A  +
Sbjct: 183 PDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGL 242

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             EM       D    ++L+RG C          ++A ++ ++M     + +  TY IV+
Sbjct: 243 LAEMSHKSLTPDIFTYSTLMRGFCQVGRP-----QEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L K    DEA   L    E    P    +  +I+ +C  GK++ A  L   ++     
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ 357

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P+  +Y ++I+ L +   S +AC L+      G +P
Sbjct: 358 PTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLP 393



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 182/384 (47%), Gaps = 5/384 (1%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           + + + + +FD + K G    V  ++ ++  L  +     A++   +    G  PN   +
Sbjct: 24  AKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAY 83

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +I   C      EA      M   G  P+V T++ +++  C  GR+ EA  +  QM  
Sbjct: 84  NTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVE 143

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               PN  T+  L+ GLC    + EA+ +   +   GL+PDVYTY A++DG+C   + +E
Sbjct: 144 RNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDE 203

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A +L N    +G  PNV ++N L NG+CK G   +  GLL  M  ++  PD  +YSTL+ 
Sbjct: 204 AQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMR 263

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           G  + G+ + A  + KEM  +G   +    + +L GLC         L++A+++ + M +
Sbjct: 264 GFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGH-----LDEAFELLKAMQE 318

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
                +   Y I+I  +    K + A     +    G  P  +T+  +I  L   G  ++
Sbjct: 319 SKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNE 378

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLI 447
           A  L   M  +  +P+  +Y+++I
Sbjct: 379 ACELFREMAVNGCLPNSCTYNVII 402



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 144/268 (53%), Gaps = 3/268 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+++ + G    V  +N L+      ++ + A K F+     G APN  +++I+I  +C
Sbjct: 172 VFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHC 231

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA+ ++  M      P++ T++ L+   C+ GR +EA E+L +M   G  PN+ 
Sbjct: 232 KSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLI 291

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY+ +L GLC  G ++EA+E+L  ++   ++P+++ YT +++G C  G+   A EL +  
Sbjct: 292 TYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNL 351

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             +G+ P VVT+  + +G  K G   +   L + M    CLP+  +Y+ ++ G L+ G  
Sbjct: 352 FVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDT 411

Query: 312 RPAVSIFKEMVRFGFEVDE---RMMNSL 336
             AV + +EMV  GF  D    RM++ L
Sbjct: 412 PNAVRLIEEMVGKGFSADSSTFRMLSDL 439



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 122/238 (51%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E   +F+ + + G   +V  +N L+         + A    +E S   L P+ +T+
Sbjct: 199 SQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTY 258

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           S ++R +C      EA++++  M   G  PN+ T++I+++ LCK G L EA E+L  M  
Sbjct: 259 STLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQE 318

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
              +PNI  Y  L++G+C  G++E A E+  N+   G++P V TYT ++ G  K G SNE
Sbjct: 319 SKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNE 378

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           A EL  E    G  PN  T+N +  G+ + G     V L++ M  +    D  ++  L
Sbjct: 379 ACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 202/413 (48%), Gaps = 8/413 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +AS ++E     + +K  G N  V   N L+  +    + E A++        G  P+  
Sbjct: 181 RASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVI 240

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C      EA +++  M      P++ TF  L++  CK+G L  ALEVL++M
Sbjct: 241 TYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEM 297

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R    P++ TY  L+ GLC VG+V+ A+ +L  +   G  PDV  YT+++DG CK G  
Sbjct: 298 CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEI 357

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +L+ E   RG    VV +++L +GYC+ G   K   +L  M   N +P   +Y+ +
Sbjct: 358 EEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIV 417

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L GL+K G I  AVS+  ++V  G+  D    N+L+ GLC     + + + +A  + ++M
Sbjct: 418 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC-----KANRVREACDLADEM 472

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +    +  T G V+  L +  + D+A   +       H P  + + ++I  LC   ++
Sbjct: 473 ASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRM 532

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           D A ++L  M          +Y  LI  +    +  +A A+Y   + +G +P 
Sbjct: 533 DDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPD 585



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 211/474 (44%), Gaps = 75/474 (15%)

Query: 70  IDIFD-SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
           I  FD + ++DG    V  +N LL  LV         K + +    G +PN  TF I+IR
Sbjct: 11  IQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIR 70

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
             C       A + +  + +    P+V  F +L++ L K G   +A+++ + M     KP
Sbjct: 71  GNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKP 130

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMN--------------------------------- 215
            I TYN ++ GLC  G +E+A E+L                                   
Sbjct: 131 EIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACA 190

Query: 216 ----VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN---------------------- 249
               +K  G+ PDV T   ++ G CK G   EA+E+L+                      
Sbjct: 191 FREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALC 250

Query: 250 ------EAIE----RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
                 EA E       +P++VTFNTL +G+CK G   + + +L+ M + N LPD I+Y+
Sbjct: 251 VAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 310

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L+NGL + G+++ A  + +E+VR G+  D     SL+ GLC KS E    +E+A+++ +
Sbjct: 311 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC-KSGE----IEEAHKLVK 365

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M+ +   T    Y  ++    +     +A   L   + +  +P   T+N V+  L  +G
Sbjct: 366 EMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDG 425

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            I KA+ L+  +     +P   +Y+ LI  L +  +  +AC L      +G  P
Sbjct: 426 SISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFP 479



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 189/398 (47%), Gaps = 34/398 (8%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP  L     V  I K   ++E ++I D +K  G    V  +N ++ AL +  +   A +
Sbjct: 201 NPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAE 260

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
                S    +P+  TF+ ++  +C       A +V++ M      P+V T+TILVN LC
Sbjct: 261 ILKTMSC---SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLC 317

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           + G+++ A  +L+++ R G  P++  Y  L+ GLC  G +EEA++++  +   G +  V 
Sbjct: 318 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVV 377

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            Y++++ G+C+ G  ++A E+L E +   + P + T+N +  G  K+G+  K V L+  +
Sbjct: 378 MYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDL 437

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM---- 342
             R  +PD ++Y+TL++GL K  ++R A  +  EM   G   ++  + S++ GLC     
Sbjct: 438 VARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRV 497

Query: 343 -KSWE-------------------------EKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
             +W                          + D ++DA  V + M  +    D   Y  +
Sbjct: 498 DDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKL 557

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           I ++  G +  EA+      +  G +P   T   + +A
Sbjct: 558 IVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 595



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 1/286 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + + I + G    V  +  L+  L    E E A K   E S  G       +S ++  YC
Sbjct: 328 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYC 387

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +  +AR+++  M      P + T+ I++  L K G + +A+ ++  +   G  P++ 
Sbjct: 388 RAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVV 447

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ GLC   RV EA ++   + + G  P+  T  +V+ G C+VGR ++A  L+ E 
Sbjct: 448 TYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEM 507

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             +   PNVV + +L +G CK         +L  M+ +    D  +Y  L+  +   G++
Sbjct: 508 SRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRV 567

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQ 356
             A++++ EMV  GF  D     +L       S +E  +L E+A+ 
Sbjct: 568 AEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFEWTNLEENAWS 613



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 6/266 (2%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     VD + K+  ++E   +   +   G    V  ++ L+           A + 
Sbjct: 339 PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREI 398

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            +E  S  + P  +T++I++          +A  +I  +   GY P+V T+  L++ LCK
Sbjct: 399 LAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCK 458

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           + R++EA ++ D+M   GC PN  T   ++ GLC VGRV++A+ +++ +      P+V  
Sbjct: 459 ANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVV 518

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           YT+++DG CK  R ++A  +L+    +GV  +   +  L       G   + + +   M 
Sbjct: 519 YTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMV 578

Query: 288 KRNCLPDKISYSTL-----LNGLLKW 308
            R  LPD  +  TL      N + +W
Sbjct: 579 ARGFLPDGSTSKTLEEAAMSNSVFEW 604


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 203/392 (51%), Gaps = 18/392 (4%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF  + K G   + + FN L+    + N+   A+    +   +   P++ +++ ++   C
Sbjct: 35  IFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLC 94

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            K    EAR ++  M +NG  PN  TF ILV+  CK G LKEA EV+D M R    P+++
Sbjct: 95  KKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVR 154

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+ GLC  G+++EA+ +   ++N  L P V TY  +++G  +   S +  EL++E 
Sbjct: 155 TYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEM 214

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             +GV PN VT+N +   Y KEG        L+ M++    PD ++++TL NG  K G++
Sbjct: 215 EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRL 274

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +  EM R G +++   +N++L  LC    E K  L+DAY++    +K+    D  
Sbjct: 275 SEAFRMMDEMSRKGLKMNSVTLNTILHTLC---GERK--LDDAYKLLSSASKRGYFVDEV 329

Query: 372 TYGIVIR---TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +YG +I     +GK    DE         E   IP  IT+  +I  LC  GK D+++   
Sbjct: 330 SYGTLIMGYFKVGKSXXWDEMK-------EKEIIPSIITYGTMIGGLCRSGKTDQSIDKC 382

Query: 429 FLMYEHAKIPSRTSYDMLI---TKLDQLEKSY 457
             + E   +P +T+Y+ +I    +  Q++K++
Sbjct: 383 NELLESGLVPDQTTYNTIILGYCREGQVDKAF 414



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 196/458 (42%), Gaps = 76/458 (16%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N +L  L    +   A     +  + GL PN  TF+I++  YC      EA +VID M 
Sbjct: 86  YNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMA 145

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEAL-------------------------------- 175
            N   P+V T+T L+  LCK G++ EA                                 
Sbjct: 146 RNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSL 205

Query: 176 ---EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
              E++D+M   G KPN  TYN ++K     G+++ A   L  ++  G  PD  T+  + 
Sbjct: 206 KGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLS 265

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE------------------- 273
           +G+CK GR +EA  +++E   +G+  N VT NT+ +  C E                   
Sbjct: 266 NGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF 325

Query: 274 ------GTPMKG---VG---LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
                 GT + G   VG       MK++  +P  I+Y T++ GL + GK   ++    E+
Sbjct: 326 VDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNEL 385

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +  G   D+   N+++ G C +   +K     A+    KM KK    D  T  I++R L 
Sbjct: 386 LESGLVPDQTTYNTIILGYCREGQVDK-----AFHFRNKMVKKSFKPDLFTCNILVRGLC 440

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
                D+AL      I  G     +TFN +I  LC EG+ ++A  LL  M E    P   
Sbjct: 441 TEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCY 500

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           +++ +++ L    +  +A          G++ Q K QD
Sbjct: 501 THNAILSALADAGRMKEA-----EEFMSGIVEQGKLQD 533



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 186/420 (44%), Gaps = 59/420 (14%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+      +      +   E    G+ PN+ T++++++ Y  +     A   + 
Sbjct: 188 VVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELR 247

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M ++G+ P+  TF  L N  CK+GRL EA  ++D+M R G K N  T N +L  LC   
Sbjct: 248 KMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGER 307

Query: 205 RVEEAYEMLMNVKNDG-------------------------------LKPDVYTYTAVMD 233
           ++++AY++L +    G                               + P + TY  ++ 
Sbjct: 308 KLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIG 367

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G C+ G+++++++  NE +E G+ P+  T+NT+  GYC+EG   K       M K++  P
Sbjct: 368 GLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKP 427

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D  + + L+ GL   G +  A+ +FK  +  G  +D    N+++ GLC     E+   E+
Sbjct: 428 DLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLC-----EEGRFEE 482

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI----------- 402
           A+ +  +M +K    D  T+  ++  L    +  EA   +   +E G +           
Sbjct: 483 AFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRK 542

Query: 403 ------------PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                       P ++ F+  I  LC +GK   A+ ++    +   I  +++Y  L+  L
Sbjct: 543 TESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGL 602



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 139/330 (42%), Gaps = 47/330 (14%)

Query: 181 MGRIGCKPNIQTYNCLLK--------------------------------------GLCY 202
           M R+  KPN+ T N L+K                                      G C 
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
             ++ EA  ++  +K+    PD  +Y  ++D  CK G+ NEA +LL +    G+ PN  T
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           FN L +GYCK G   +   ++ +M + N LPD  +Y+TL+ GL K GKI  A  +  EM 
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 323 RFGFEVDERMMNSLLRGL--CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
                      N L+ G   C  S +        +++ ++M  K    +  TY +V++  
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLK-------GFELIDEMEGKGVKPNAVTYNVVVKWY 233

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K  K D A   L    E G  P  +TFN +    C  G++ +A  ++  M       + 
Sbjct: 234 VKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNS 293

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQG 470
            + + ++  L    K  DA  L  +A K+G
Sbjct: 294 VTLNTILHTLCGERKLDDAYKLLSSASKRG 323



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/234 (19%), Positives = 101/234 (43%), Gaps = 23/234 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           ++    + ID  + + + G     + +N +++      + + A  F ++       P+ +
Sbjct: 371 RSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLF 430

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T +I++R  C +    +A K+       G   +  TF  +++ LC+ GR +EA ++L +M
Sbjct: 431 TCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEM 490

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--------------------- 220
                 P+  T+N +L  L   GR++EA E +  +   G                     
Sbjct: 491 EEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETS 550

Query: 221 --LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
               P+   ++  ++  C  G+  +AM ++ E+ ++G+  +  T+ +L  G  K
Sbjct: 551 QESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIK 604



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/192 (19%), Positives = 83/192 (43%), Gaps = 45/192 (23%)

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAV----SIFKEMVRFGFEVDERMMNSLLRGLC 341
           MK+ +  P+ ++ +TL+  L+++   +P+V    +IF ++++ G EV+    N L+ G C
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPS-KPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCC 59

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
           +++                                        K  EA+  +        
Sbjct: 60  IEN----------------------------------------KLSEAIGLIGKMKHFSC 79

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P  +++N ++  LC +GK+++A  LL  M  +   P+R ++++L++   +L    +A  
Sbjct: 80  FPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAE 139

Query: 462 LYGAALKQGVIP 473
           +     +  V+P
Sbjct: 140 VIDIMARNNVLP 151


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 214/446 (47%), Gaps = 32/446 (7%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVML--NEQETAVKFFSEASSYGLAPNSWTF 123
           + + ++  +  K  G    V  +N +L A+V    + + +A + + E     ++PN +T+
Sbjct: 158 IDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTY 217

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           +I+IR +C+  +  +       M  NG  PNV T+  L+++ CK GR+ EA  +L  M  
Sbjct: 218 NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 277

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            G +PN+ +YN ++ GLC  G ++EA+E+L  +   G  PD  TY  +++G+CK G  ++
Sbjct: 278 KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ 337

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A+ +  E +  GV+P+VVT+  L N  CK     + +     M+ R   P++ +Y+TL++
Sbjct: 338 ALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLID 397

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL------------- 350
           G  + G +  A  I  EM   GF       N+ + G C+    E+ L             
Sbjct: 398 GFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP 457

Query: 351 -----------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
                            L+ A+Q+ ++M +K    D  TY  +I+ L + ++  EA    
Sbjct: 458 DVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLS 517

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
              ++MG  P   T+  +I A C EG ++KAL L   M     +P   +Y +LI  L++ 
Sbjct: 518 QEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQ 577

Query: 454 EKSYDACALYGAALKQGVIPQRKPQD 479
            ++ +A  L    + +  +P     D
Sbjct: 578 ARTREAKRLLFKLIYEESVPSDVTYD 603



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 204/391 (52%), Gaps = 9/391 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ +  F  ++++G   +V  +N L+ A   +   + A       SS G+ PN  ++++
Sbjct: 230 LQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNV 289

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C +    EA ++++ M   G+ P+  T+  L+N  CK G   +AL +  +M R G
Sbjct: 290 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 349

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ TY  L+  +C    +  A E    ++  GL+P+  TYT ++DGF + G  NEA 
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +LNE  E G +P+VVT+N   +G+C      + +G+++ M ++   PD +SYST+++G 
Sbjct: 410 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G++  A  + +EMV  G   D    +SL++GLC     E   L +A  + ++M    
Sbjct: 470 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC-----EMRRLTEACDLSQEMLDMG 524

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLH-HAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              D  TY  +I         ++AL HLH   I  G +P  +T++ +I  L  + +  +A
Sbjct: 525 LPPDEFTYTTLINAYCVEGDLNKAL-HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 583

Query: 425 LLLLF-LMYEHAKIPSRTSYDMLITKLDQLE 454
             LLF L+YE + +PS  +YD LI     +E
Sbjct: 584 KRLLFKLIYEES-VPSDVTYDTLIENCSNIE 613



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 208/431 (48%), Gaps = 26/431 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   +  S+   G   ++  +N ++  L      + A +   E    G  P+  
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 320

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  YC + +F +A  +   M  NG  P+V T+T L+NS+CK+  L  A+E  DQM
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +PN +TY  L+ G    G + EAY +L  +   G  P V TY A + G C + R 
Sbjct: 381 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 440

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA+ ++ E +E+G+ P+VV+++T+ +G+C++G   +   + + M ++   PD ++YS+L
Sbjct: 441 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 500

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL +  ++  A  + +EM+  G   DE    +L+   C+    E D L  A  + ++M
Sbjct: 501 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV----EGD-LNKALHLHDEM 555

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ-------- 413
             K  + D  TY ++I  L K  +T EA   L   I    +P  +T++ +I+        
Sbjct: 556 IHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFK 615

Query: 414 -------ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALY 463
                    C +G + +A  +   M E    P    Y+++I    +   L K+++   LY
Sbjct: 616 SVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN---LY 672

Query: 464 GAALKQGVIPQ 474
              +  G +P 
Sbjct: 673 KEMIHSGFVPH 683



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 142/298 (47%), Gaps = 15/298 (5%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   I + + + G + SV  +N  +    +L   E A+    E    GLAP+  ++S 
Sbjct: 405 LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 464

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C K +   A ++   M + G  P+  T++ L+  LC+  RL EA ++  +M  +G
Sbjct: 465 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY  L+   C  G + +A  +   + + G  PD  TY+ +++G  K  R+ EA 
Sbjct: 525 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 584

Query: 246 ELLNEAIERGVTPNVVTFNTLFN---------------GYCKEGTPMKGVGLLKLMKKRN 290
            LL + I     P+ VT++TL                 G+C +G   +   + + M +RN
Sbjct: 585 RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 644

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
             P +  Y+ +++G  + G +  A +++KEM+  GF      + +L++ L  +   E+
Sbjct: 645 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE 702



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 42/286 (14%)

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE--AMELLNE 250
           ++ ++K   ++  +++A   +   K+ G  P V +Y +V+D   +   S +  A E+  E
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            I   V+PNV T+N L  G+C  G   KG+G    M++  CLP+ ++Y+TL++   K G+
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I  A  + K M   G + +    N ++ GLC +       +++A+++ E+M  K      
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS-----MKEAWEILEEMGYK------ 313

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
                                        G  P  +T+N ++   C EG   +AL++   
Sbjct: 314 -----------------------------GFTPDEVTYNTLLNGYCKEGNFHQALVIHAE 344

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           M  +   PS  +Y  LI  + +      A   +     +G+ P  +
Sbjct: 345 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 390



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/274 (19%), Positives = 96/274 (35%), Gaps = 52/274 (18%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           + G +     ++ L+  L  +     A     E    GL P+ +T++ +I  YC + D  
Sbjct: 487 EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLN 546

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSL-------------------------------- 165
           +A  + D M   G+ P+  T+++L+N L                                
Sbjct: 547 KALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 606

Query: 166 ------------------CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                             C  G + EA  V + M     KP    YN ++ G C  G + 
Sbjct: 607 ENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLP 666

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A+ +   + + G  P   T   ++    K G + E  E++ + +             L 
Sbjct: 667 KAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLV 726

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPD--KISYS 299
               KEG     + +L  M K   LP+  K +Y+
Sbjct: 727 EINHKEGNMEAVLNVLTDMAKDGLLPNSGKTAYA 760


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 204/404 (50%), Gaps = 8/404 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E   I + +   G     + FN L++AL   N+ E A+    E +  GL+PN +TF+I
Sbjct: 352 LEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNI 411

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C   D   A ++ + M  +G  P+  T+ IL+++LC SG+L +AL++L +M   G
Sbjct: 412 LINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSG 471

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C  +  TYN ++ GLC   R+EEA E+   +   G+  +  T+  ++DG C   R ++A 
Sbjct: 472 CPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAA 531

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           EL+++ I  G+ PN VT+N++   YCK+G   K   +L+ M       D ++Y+TL+NGL
Sbjct: 532 ELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGL 591

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  + + A+ + + M   G +   +  N +++ L   +        DA  +F +MT+  
Sbjct: 592 CKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNG-----RDALSLFREMTEVG 646

Query: 366 SVTDPGTYGIVIRTLGK-GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              D  TY IV R L + G    EA   L    + G IP   +F  + + L   G  D  
Sbjct: 647 GPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYL 706

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           +  + L+ E A    R S    I    ++ K YDA A +G  L+
Sbjct: 707 IRAIELIVEKANF--RESDISAIRGYLRIRKYYDAIATFGRLLE 748



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 194/391 (49%), Gaps = 5/391 (1%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + F  L+   V     E A++  +  S  G +P S T +++I  YC      +A   I  
Sbjct: 232 TTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQ 291

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
              +G+ P+  TF+  VN LC++G +  AL+VL  M + GC+P++ TY+ ++  LC  G 
Sbjct: 292 EIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGE 351

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +EEA  ++  + + G  PD  T+  ++   C   +  EA++L  E   +G++PNV TFN 
Sbjct: 352 LEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNI 411

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L N  CK G P   V L + MK   C PD+++Y+ L++ L   GK+  A+ + KEM   G
Sbjct: 412 LINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSG 471

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   N+++ GLC     ++  +E+A +VF++M       +  T+  +I  L   ++
Sbjct: 472 CPQSTVTYNTIIDGLC-----KRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAER 526

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+A   +   I  G  P  +T+N+++   C +G I KA  +L  M  +       +Y  
Sbjct: 527 IDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYAT 586

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           LI  L +  ++  A  L      +G+ P  K
Sbjct: 587 LINGLCKARRTQAALKLLRGMRMKGMKPTPK 617



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 175/374 (46%), Gaps = 6/374 (1%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           ++G    V  ++ ++  L    E E A    ++    G  P++ TF+ +I   C +N   
Sbjct: 329 QEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLE 388

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA  +   +   G  PNV TF IL+N+LCK G    A+ + ++M   GC P+  TYN L+
Sbjct: 389 EALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILI 448

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
             LC  G++ +A ++L  ++  G      TY  ++DG CK  R  EA E+ ++    G+ 
Sbjct: 449 DNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIG 508

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            N +TFNTL +G C          L+  M      P+ ++Y+++L    K G I  A  I
Sbjct: 509 RNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADI 568

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
            + M   GFEVD     +L+ GLC     +      A ++   M  K     P  Y  VI
Sbjct: 569 LQTMTANGFEVDVVTYATLINGLCKARRTQA-----ALKLLRGMRMKGMKPTPKAYNPVI 623

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC-GEGKIDKALLLLFLMYEHAK 436
           ++L +G    +AL       E+G  P   T+  V + LC G G I +A   L  M ++  
Sbjct: 624 QSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGF 683

Query: 437 IPSRTSYDMLITKL 450
           IP  +S+ ML   L
Sbjct: 684 IPEFSSFRMLAEGL 697



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 190/408 (46%), Gaps = 11/408 (2%)

Query: 71  DIFDSIKKD----GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           D FD +       G   +   +N LL  L   ++ +     ++E SS G+ P+  TF+ +
Sbjct: 143 DAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTV 202

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I   C       A  +++ M      P+ TTFT L+    + G ++ AL +  +M  +GC
Sbjct: 203 IDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGC 262

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P   T N L+ G C +GRV +A   +     DG +PD  T++  ++G C+ G  + A++
Sbjct: 263 SPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALK 322

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           +L   ++ G  P+V T++T+ N  C  G   +  G++  M    CLPD  +++TL+  L 
Sbjct: 323 VLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALC 382

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
              ++  A+ + +E+   G   +    N L+  LC            A ++FE+M     
Sbjct: 383 TENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHL-----AVRLFEEMKSSGC 437

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR-TITFNNVIQALCGEGKIDKAL 425
             D  TY I+I  L    K  +AL  L   +E+   P+ T+T+N +I  LC   +I++A 
Sbjct: 438 TPDEVTYNILIDNLCSSGKLAKAL-DLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAE 496

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   M       +  +++ LI  L   E+  DA  L    + +G+ P
Sbjct: 497 EVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQP 544



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 5/152 (3%)

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
           FG + +  + N LL  L   S  +  LLE AY    +M+ +    D  T+  VI  L + 
Sbjct: 155 FGVQANTEVYNHLLTVLAEGS--KIKLLESAYT---EMSSQGIEPDVVTFNTVIDALCRA 209

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           ++   A++ L         P   TF  +++    EG I+ AL L   M E    P+  + 
Sbjct: 210 RQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTV 269

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           ++LI    +L +  DA       +  G  P R
Sbjct: 270 NVLINGYCKLGRVGDALGYIQQEIADGFEPDR 301


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 204/388 (52%), Gaps = 5/388 (1%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           S F+ LL A+V +    TA+  F++  S G++P+  TF+I+I CY +++    A  ++  
Sbjct: 56  SVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLAT 115

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           +  +GY PN+ TF  ++N  C +G + +AL+    +   G   +  TY  L+ GL   G+
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQ 175

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++ A  +L  ++   ++P++  Y+A++DG CK G  ++A+ L ++  ERG+  + VT+N+
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNS 235

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G C  G   +   LL  M + N  PD  +++ L++ L K G+I  A  +   M + G
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            + D    N+L+ G C      ++ + +A ++F +M K+    D   Y ++I    K K 
Sbjct: 296 EKPDIVTYNALMEGYC-----SRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            DEA++          +P   ++N++I  LC  G+I     LL  M+  A+ P   +Y++
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           LI  L +  +  +A  +    +K+GV P
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKP 438



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 195/397 (49%), Gaps = 6/397 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           + K G    +  +N L+           A + F+     GL P+   ++++I  YC    
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA  +   + +    P + ++  L++ LC SGR+    ++LD+M      P++ TYN 
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+  LC  GR+ EA  +L+ +   G+KP++ TY A+MDG+C     N A ++ N  ++ G
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           + P+++ +N L NGYCK     + + L K M+ +N +PD  SY++L++GL   G+I    
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +  EM   G   D    N LL   C     +K     A  +F ++ + +   D  T   
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDK-----AISLFRQIVEGIW-PDFYTNHA 584

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           ++  L KG+K   A   L H +  G  P   T+  +I ALC +G   +A+LLL  M ++ 
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDND 644

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           + P   +++++I  L Q  ++  A  L    + +G++
Sbjct: 645 RPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 199/412 (48%), Gaps = 6/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K  + +   ++K     ++  ++ L+  L        A+   S+    G+  ++ 
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C+   + E  +++  M      P+  TF IL+++LCK GR+ EA  VL  M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G KP+I TYN L++G C    V EA E+   +   GL+PDV  Y  ++DG+CK    
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EAM L  E   + + P + ++N+L +G C  G       LL  M      PD ++Y+ L
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K G+I  A+ +   M++ G + +    N+++ G C+++      +  A  +F +M
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN-----VNVAKDIFNRM 466

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K     D   Y ++I    K +  DEA++          IP   ++N++I  LC  G+I
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                LL  M +  + P   +Y++L+    + +    A +L+   + +G+ P
Sbjct: 527 PHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLF-RQIVEGIWP 577



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 152/308 (49%), Gaps = 5/308 (1%)

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           C+   + +A+   ++M R+   P    ++ LL  +  +G    A  +   +++ G+ P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            T+T +++ +     +  A  LL   ++ G  PN+VTFNT+ NG+C  G   K +   + 
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           +  +  L D+ +Y TL+NGL K G+I+ A+ + +EM +   + +  M ++L+ GLC   +
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                + DA  +  ++ ++  + D  TY  +I       +  E    L   +     P  
Sbjct: 211 -----VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDD 265

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
            TFN +I ALC EG+I +A  +L +M +  + P   +Y+ L+      E  ++A  L+  
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNR 325

Query: 466 ALKQGVIP 473
            +K+G+ P
Sbjct: 326 MVKRGLEP 333



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 1/273 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +   + K G   ++  +N ++    + N    A   F+     GL P+  
Sbjct: 417 KEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDIL 476

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++++I  YC      EA  +   M      P++ ++  L++ LC  GR+    E+LD+M
Sbjct: 477 NYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM 536

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ TYN LL   C     ++A  +   +  +G+ PD YT  A++D  CK  + 
Sbjct: 537 CDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKL 595

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A + L   +  G +PNV T+  L N  CK+G+  + + LL  M+  +  PD I++  +
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
           +  LL+  +   A  + +EM+  G    E+ +N
Sbjct: 656 IGVLLQRNETDKAEKLREEMIARGLVNIEKSLN 688


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 207/409 (50%), Gaps = 7/409 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E +++   +   G    +  +N +L  L M    +   +   E    G  PN  TF+ 
Sbjct: 194 VDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNT 253

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C    F +  + +  M ++G  P++  +  +++ +CK G  + A ++L +M   G
Sbjct: 254 LIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYG 313

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KPN+  YN +LKGLC   R EEA ++L  +  +    D  T+  ++D FC+ G  +  +
Sbjct: 314 LKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVI 373

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL + +E G  P+V+T+ T+ NG+CKEG   + V LLK M    C P+ ISY+ +L GL
Sbjct: 374 ELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGL 433

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            +  +   A  +   M++ G   +    N+L+  +C     +K L+E A ++ ++M    
Sbjct: 434 CRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMC-----KKGLVEQAIELLKQMLVNG 488

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  +Y  VI  LGK  KT+EAL  L+  I  G  P TI ++++  AL  EG+ DK +
Sbjct: 489 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDK-I 547

Query: 426 LLLFLMYEHAKIPSRTS-YDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + +F   + A + S  + Y+ +I+ L +  ++  A   +   +  G +P
Sbjct: 548 IQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 596



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 180/363 (49%), Gaps = 24/363 (6%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+    I D I KDG                     E A    S   SYGL PN   ++ 
Sbjct: 283 LRMYATIIDGICKDG-------------------HHEVANDILSRMPSYGLKPNVVCYNT 323

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C+   + EA  ++  MF      +  TF ILV+  C++G +   +E+L+QM   G
Sbjct: 324 VLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 383

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P++ TY  ++ G C  G V+EA  +L N+   G KP+  +YT V+ G C+  R  +A 
Sbjct: 384 CIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQ 443

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           EL++  I++G  PN VTFNTL N  CK+G   + + LLK M    C PD ISYST+++GL
Sbjct: 444 ELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 503

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GK   A+ +   M+  G   +  + +S+   L  +   +K +     Q+F+ +    
Sbjct: 504 GKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKII-----QMFDSIQDAT 558

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
             +D   Y  VI +L K  +TD A+    + +  G +P   T+  +I+ L  EG + +A 
Sbjct: 559 VRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ 618

Query: 426 LLL 428
            LL
Sbjct: 619 DLL 621



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 175/358 (48%), Gaps = 9/358 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN++T+  ++R  C +    +A  V+D M   G         +++ + C+ G  + A+  
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L  +   GC  +    N ++  +C  G V+E  E+L  + + G +PD+ +Y AV+ G C 
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R ++  EL+ E +  G  PNV TFNTL    C+ G   +    L  M +  C PD   
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEE-KDLLEDAY 355
           Y+T+++G+ K G    A  I   M  +G + +    N++L+GLC  + WEE +DLL + +
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           Q       +    D  T+ I++    +    D  +  L   +E G IP  IT+  VI   
Sbjct: 346 Q-------EDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 398

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           C EG +D+A++LL  M      P+  SY +++  L + E+  DA  L    ++QG +P
Sbjct: 399 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLP 456



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 185/371 (49%), Gaps = 5/371 (1%)

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
           +AV+      + G   +S   ++++   C +    E  +++  +   G  P++ ++  ++
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
             LC + R  +  E++ +M R+GC PN+ T+N L+  LC  G  E+ +E L  +   G  
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCT 280

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           PD+  Y  ++DG CK G    A ++L+     G+ PNVV +NT+  G C      +   L
Sbjct: 281 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDL 340

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L  M + +C  D ++++ L++   + G +   + + ++M+  G   D     +++ G C 
Sbjct: 341 LAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFC- 399

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
               ++ L+++A  + + M+      +  +Y IV++ L + ++  +A   + H I+ G +
Sbjct: 400 ----KEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCL 455

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P  +TFN +I  +C +G +++A+ LL  M  +   P   SY  +I  L +  K+ +A  L
Sbjct: 456 PNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 515

Query: 463 YGAALKQGVIP 473
               + +G+ P
Sbjct: 516 LNVMINKGITP 526



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 133/265 (50%), Gaps = 8/265 (3%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            VDR+        I++ + + + G    V  +  ++         + AV      S+ G 
Sbjct: 368 LVDRV--------IELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 419

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            PN+ +++I+++  C    + +A+++I  M   G  PN  TF  L+N +CK G +++A+E
Sbjct: 420 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIE 479

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +L QM   GC P++ +Y+ ++ GL   G+ EEA E+L  + N G+ P+   Y+++     
Sbjct: 480 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 539

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + GR+++ +++ +   +  V  +   +N + +  CK     + +     M    C+P++ 
Sbjct: 540 REGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 599

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEM 321
           +Y+ L+ GL   G +R A  +  E+
Sbjct: 600 TYTILIRGLASEGLVREAQDLLSEL 624



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 133/306 (43%), Gaps = 19/306 (6%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
            + L+ SLC +GR  +A   LD  G       +  YN ++ G C  G+V  A  +   V 
Sbjct: 47  LSALIRSLCAAGRTADAARALDTAGDAA---GVVAYNAMIAGYCRAGQVAAARRLAAAVP 103

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
              + P+ YTY  ++   C  G   +A+ +L+E   RG        + +    C+ G   
Sbjct: 104 ---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
             V  L+++  + C  D  + + +++ + + G +   V + +++  FG E D    N++L
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 338 RGLCM-KSWEEKDLLEDAYQVFEKMTKKVSVTDP---GTYGIVIRTLGKGKKTDEALIHL 393
           +GLCM K W++         V E M + V V  P    T+  +I  L +    ++    L
Sbjct: 221 KGLCMAKRWDD---------VEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEAL 271

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
               E G  P    +  +I  +C +G  + A  +L  M  +   P+   Y+ ++  L   
Sbjct: 272 SQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSA 331

Query: 454 EKSYDA 459
           E+  +A
Sbjct: 332 ERWEEA 337



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 102/224 (45%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +  ++   G   +   +  +L  L        A +  S     G  PN  TF+ 
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNT 463

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C K    +A +++  M  NG  P++ +++ +++ L K+G+ +EALE+L+ M   G
Sbjct: 464 LINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKG 523

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN   Y+ +   L   GR ++  +M  ++++  ++ D   Y AV+   CK   ++ A+
Sbjct: 524 ITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAI 583

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           +     +  G  PN  T+  L  G   EG   +   LL  +  R
Sbjct: 584 DFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 192/389 (49%), Gaps = 5/389 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           + +F  +L +LV +N  +TA+    E    G+A +  TF+I+I C+        +  V  
Sbjct: 56  IFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFA 115

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY PN  T T L+  LC  G++ +AL   D++  +G   N   Y  L+ GLC VG
Sbjct: 116 NILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVG 175

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +   A ++L  V    ++P+V  Y  ++D  CKV   NEA +L +E + +G++P+VVT++
Sbjct: 176 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYS 235

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +G+C  G     +GL   M      PD  ++S L++G  K G+++ A ++   M++ 
Sbjct: 236 ALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQ 295

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G + D     SL+ G C+     K     A  +F  M +     +  +Y I+I    K K
Sbjct: 296 GIKPDVVTYCSLMDGYCLVKQVNK-----AKSIFNTMAQGGVTANVQSYNIMINGFCKIK 350

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           K DEA+           IP  +T+N++I  LC  GKI  AL L+  M++      + +Y+
Sbjct: 351 KVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYN 410

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++  L +  +   A AL      +G+ P
Sbjct: 411 SILDALCKNHQVDKAIALLTKMKDEGIQP 439



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 207/410 (50%), Gaps = 5/410 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K +  +  I +   ++ +G    +  FN L+     L     +   F+     G  PN+
Sbjct: 67  VKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNA 126

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T + +I+  C K    +A    D +   G+H N   +  L+N LCK G+   AL++L +
Sbjct: 127 ITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRR 186

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           +     +PN+  YN ++  +C V  V EA+++   + + G+ PDV TY+A++ GFC +G+
Sbjct: 187 VDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGK 246

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            N+A+ L N+ I   + P+V TF+ L +G+CKEG   +   +L +M K+   PD ++Y +
Sbjct: 247 LNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCS 306

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G     ++  A SIF  M + G   + +  N ++ G C     +   +++A  +F++
Sbjct: 307 LMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFC-----KIKKVDEAMNLFKE 361

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  K  + D  TY  +I  L K  K   AL  +    + G     IT+N+++ ALC   +
Sbjct: 362 MHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQ 421

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +DKA+ LL  M +    P   +Y +LI  L +  +  DA  ++   L +G
Sbjct: 422 VDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKG 471



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 191/385 (49%), Gaps = 5/385 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + +   D +   G + +   +  L+  L  + +   A++         + PN   ++ 
Sbjct: 142 IHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT 201

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G  P+V T++ L++  C  G+L +A+ + ++M    
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE 261

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ T++ L+ G C  GRV+EA  +L  +   G+KPDV TY ++MDG+C V + N+A 
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + N   + GVT NV ++N + NG+CK     + + L K M  +N +PD ++Y++L++GL
Sbjct: 322 SIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGL 381

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GKI  A+ +  EM   G   D+   NS+L  LC     +K     A  +  KM  + 
Sbjct: 382 CKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDK-----AIALLTKMKDEG 436

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY I+I  L KG +  +A       +  G+     T+  +IQ  C     DKAL
Sbjct: 437 IQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKAL 496

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL 450
            LL  M ++  IP+  +Y+++I  L
Sbjct: 497 ALLSKMEDNGCIPNAKTYEIIILSL 521



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 186/359 (51%), Gaps = 7/359 (1%)

Query: 33  AAASLSTAESLDLK-ENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFND 90
            +A+L     +D K   P  +     +D + K   + E  D++  +   G +  V  ++ 
Sbjct: 177 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSA 236

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    +L +   A+  F++  S  + P+ +TFSI++  +C +    EA+ V+  M   G
Sbjct: 237 LISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQG 296

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             P+V T+  L++  C   ++ +A  + + M + G   N+Q+YN ++ G C + +V+EA 
Sbjct: 297 IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAM 356

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +    + PDV TY +++DG CK G+ + A++L++E  +RGV  + +T+N++ +  
Sbjct: 357 NLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDAL 416

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK     K + LL  MK     PD  +Y+ L++GL K G+++ A +IF++++  G+ +  
Sbjct: 417 CKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITV 476

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                +++G C     + DL + A  +  KM     + +  TY I+I +L +  + D A
Sbjct: 477 YTYTVMIQGFC-----DNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMA 530



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 95/195 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +++F  +        V  +N L+  L    +   A+K   E    G+  +  
Sbjct: 348 KIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKI 407

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C  +   +A  ++  M D G  P++ T+TIL++ LCK GRLK+A  + + +
Sbjct: 408 TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDL 467

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G    + TY  +++G C     ++A  +L  ++++G  P+  TY  ++    +   +
Sbjct: 468 LVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDEN 527

Query: 242 NEAMELLNEAIERGV 256
           + A +LL E I RG+
Sbjct: 528 DMAEKLLREMIARGL 542


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 194/394 (49%), Gaps = 5/394 (1%)

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
           +++  F  LL+ L   +  + A   + +  + G+ P+  TF+ MI   C K    EA+ +
Sbjct: 165 YTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLI 224

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           +  +F    +PN  T+T L+   C++  L  A  + D+M + GC PN  TY+ L+ GLC 
Sbjct: 225 MSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCS 284

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            GR+EEA +ML  +   G++P VYTYT  +   C  G S+EA+ELL +  +RG  PN+ T
Sbjct: 285 EGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           F  L +G  ++G     +GL   M     +P  ++Y+ L+N L   G+   A +IFK M+
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWML 404

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
             G     +  N +++  C+    +K ++     +F+KM K  S  +  TY  +I    K
Sbjct: 405 SHGSLPSTQTYNEIIKCFCLMGDIQKAMV-----IFDKMLKAGSSPNVITYNTLIYGYCK 459

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
               + A+  L      G  P   T+  +I      GK++ A  L + M EH   P+  +
Sbjct: 460 QGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVT 519

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           Y  +I     L K  DA AL+   ++ G +P  +
Sbjct: 520 YTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 196/403 (48%), Gaps = 5/403 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D++  +   G   S+  FN ++  L      + A    S    Y   PN++T++ +I  +
Sbjct: 188 DMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGH 247

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C  ++   A  + D M  +G  PN  T++ L+N LC  GRL+EA+++L++M + G +P +
Sbjct: 248 CRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTV 307

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY   L  LC  G   EA E+L  +K  G  P++ T+TA++ G  + G+   A+ L ++
Sbjct: 308 YTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHK 367

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G+ P  VT+N L N  C EG       + K M     LP   +Y+ ++      G 
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I+ A+ IF +M++ G   +    N+L+ G C     ++  L +A ++ E M       D 
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYC-----KQGNLNNAMRLLEIMKGNGLKPDA 482

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I    +G K + A    +  +E G  P  +T+  +I       K+D AL L + 
Sbjct: 483 WTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWK 542

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M E   +PS  +Y+++I+   +     +A    G  +KQG++P
Sbjct: 543 MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLP 585



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 189/388 (48%), Gaps = 5/388 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + KDG + +   ++ L+  L      E A+    E    G+ P  +T++I +   C
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           +     EA +++  M   G  PN+ TFT L++ L + G+ + A+ +  +M   G  P   
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+  LC  GR E A+ +   + + G  P   TY  ++  FC +G   +AM + ++ 
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           ++ G +PNV+T+NTL  GYCK+G     + LL++MK     PD  +Y+ L++G  + GK+
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A S+F  M+  G   +     +++ G     +     ++DA  +F KM +  ++    
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDG-----YFNLAKVDDALALFWKMVESGNLPSSQ 553

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY ++I    K     EA       ++ G +P  IT+ + I  LC  G+   A  +   M
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDA 459
            +    P+  +Y  LI  L Q  ++ DA
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDA 641



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 182/382 (47%), Gaps = 7/382 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E +++   +KK G   ++  F  L+  L    + E A+  + +  + GL P + T++ +I
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALI 384

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +  F  A  +   M  +G  P+  T+  ++   C  G +++A+ + D+M + G  
Sbjct: 385 NQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS 444

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN+ TYN L+ G C  G +  A  +L  +K +GLKPD +TYT ++ GF + G+   A  L
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
               +E G++PN VT+  + +GY         + L   M +   LP   +Y+ +++G  K
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
              I  A +   +MV+ G   +     S + GLC            A+++F +M K+   
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL-----AFKIFHEMEKRNYF 619

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIH--LHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            +  TY  +I  L +  + ++A ++  L      G  P   T+  +++ LCGEG+  +A 
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
            L+  M +    PS   Y  L+
Sbjct: 680 QLVVSMQKKGLQPSEEIYRALL 701



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 188/413 (45%), Gaps = 7/413 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E +D+ + + + G   +V  +   L++L        AV+   +    G  PN  TF+ 
Sbjct: 288 LEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTA 347

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I        F  A  +   M  +G  P   T+  L+N LC  GR + A  +   M   G
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+ QTYN ++K  C +G +++A  +   +   G  P+V TY  ++ G+CK G  N AM
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL      G+ P+  T+  L +G+ + G       L   M +    P+ ++Y+ +++G 
Sbjct: 468 RLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
               K+  A+++F +MV  G     +  N ++ G     + + + + +A     KM K+ 
Sbjct: 528 FNLAKVDDALALFWKMVESGNLPSSQTYNVMISG-----FSKTNSISEAENFCGKMVKQG 582

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            + +  TY   I  L +  +T  A    H   +  + P   T++++I  LC EG+ + A 
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642

Query: 426 L--LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           +  LL  +  +   P+  +Y  L+  L    + Y+A  L  +  K+G+ P  +
Sbjct: 643 MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEE 695



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 177/392 (45%), Gaps = 9/392 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ + IFD + K G++ +V  +N L+           A++        GL P++WT++ 
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +        A  +   M ++G  PN  T+T +++      ++ +AL +  +M   G
Sbjct: 488 LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+ QTYN ++ G      + EA      +   GL P+V TYT+ +DG C+ GR+  A 
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG--VGLLKLMKKRNCLPDKISYSTLLN 303
           ++ +E  +R   PN+ T+++L  G C+EG         LL  +    C P+  +Y+TL+ 
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVK 667

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-LEDAYQVFEKMT 362
           GL   G+   A  +   M + G +  E +  +LL G C      K+L +E A  +F  M 
Sbjct: 668 GLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGEC------KNLKVESALNIFYSMD 721

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
                     Y  +I  L K    +EA       +E       + +  ++  L  EG+ D
Sbjct: 722 TLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETD 781

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
             L LL +M       +  +Y ML  +L  L+
Sbjct: 782 LCLKLLHVMESRNCTLNFQTYVMLARELSALD 813



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 161/335 (48%), Gaps = 7/335 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   + + + +K +G       + +L+       + E A   F     +G++PN  
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  Y N     +A  +   M ++G  P+  T+ ++++   K+  + EA     +M
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM 578

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  PN+ TY   + GLC  GR   A+++   ++     P++YTY++++ G C+ GR+
Sbjct: 579 VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638

Query: 242 NEA--MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
            +A    LL      G  PNV T+ TL  G C EG   +   L+  M+K+   P +  Y 
Sbjct: 639 EDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYR 698

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            LL G  K  K+  A++IF  M   GF++      +L+  LC     +++ +E+A  +F+
Sbjct: 699 ALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALC-----KENFIEEAQCIFQ 753

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            M +K   +D   + +++  L K  +TD  L  LH
Sbjct: 754 TMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLH 788



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 8/267 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + + E  +    + K G   +V  +   +  L        A K F E       PN +
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623

Query: 122 TFSIMIRCYCNKNDFFEAR--KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           T+S +I   C +    +A    ++  +   G  PNV T+T LV  LC  GR  EA +++ 
Sbjct: 624 TYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVV 683

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M + G +P+ + Y  LL G C   +VE A  +  ++   G +  +  Y A++   CK  
Sbjct: 684 SMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKEN 743

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
              EA  +    +E+    + V +  L +G  KEG     + LL +M+ RNC  +  +Y 
Sbjct: 744 FIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYV 803

Query: 300 TL------LNGLLKWGKIRPAVSIFKE 320
            L      L+  +K  +I   + I K+
Sbjct: 804 MLARELSALDCAIKIPQISQQLGIVKD 830


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 202/408 (49%), Gaps = 8/408 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   I + +   G     + FN L++AL   N  E A+    E +  GL+P+ +
Sbjct: 349 KNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVY 408

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I+I   C   D     ++ + M  +G  P+  T+ IL++ LC  G+L  AL++L++M
Sbjct: 409 TFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEM 468

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +  TYN ++  LC   R+EEA E+   +   G+     T+  ++DG CK  R 
Sbjct: 469 ESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRI 528

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A EL+ + ++ G+ PN +T+N++   YCK+G   K   +L+ M       D ++Y TL
Sbjct: 529 DDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTL 588

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K G+ + A+ + + M   G     +  N +++ L       ++ L DA  +F +M
Sbjct: 589 INGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF-----RRNNLRDALNLFREM 643

Query: 362 TKKVSVTDPGTYGIVIRTLGK-GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           T+     D  TY IV R+L + G    EA   L   +  G +P   +F  + + L   G 
Sbjct: 644 TEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGM 703

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
            D  +  + L+ E AK   R S    I    ++ K YDA A +G  L+
Sbjct: 704 DDYLISAIELIIEKAKF--RESDASAIRGYLKIRKYYDALATFGRLLE 749



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 210/451 (46%), Gaps = 40/451 (8%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++ S LK    +++ +   G    V   N L+ AL   ++  TAV    E SS+G+AP+ 
Sbjct: 173 VEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDE 232

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+ +++ +  +     A +V   M + G  P   T  +L+N  CK GR+++AL  + Q
Sbjct: 233 TTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQ 292

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
               G +P+  TYN  + GLC  G V  A +++  +  +G  PDV+TY  V++   K G 
Sbjct: 293 EIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 352

Query: 241 SNEAMELLNEAIERG-----------------------------------VTPNVVTFNT 265
            +EA  ++N+ ++RG                                   ++P+V TFN 
Sbjct: 353 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNI 412

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L N  CK G P  G+ L + MK   C PD+++Y+ L++ L   GK+  A+ +  EM   G
Sbjct: 413 LINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   N+++  LC K       +E+A +VF++M  +       T+  +I  L K K+
Sbjct: 473 CPRSTVTYNTIIDALCKKMR-----IEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKR 527

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+A   +   ++ G  P  IT+N+++   C +G I KA  +L  M  +       +Y  
Sbjct: 528 IDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGT 587

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           LI  L +  ++  A  L      +G+ P  K
Sbjct: 588 LINGLCKAGRTQVALKLLRGMRIKGIRPTPK 618



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 191/395 (48%), Gaps = 7/395 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G       FN LL  LV  ++ +     ++E +  G+ P+  T + +I+  C  +    A
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             +++ M  +G  P+ TTFT L+    + G ++ AL V  +M   GC P   T N L+ G
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING 276

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C +GRVE+A   +     DG +PD  TY   + G C+ G  + A+++++  ++ G  P+
Sbjct: 277 YCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPD 336

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           V T+NT+ N   K G   +  G++  M  R CLPD  +++TL+  L    ++  A+ + +
Sbjct: 337 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAR 396

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           E+   G   D    N L+  LC        +     ++FE+M       D  TY I+I  
Sbjct: 397 ELTVKGLSPDVYTFNILINALCKVGDPHLGI-----RLFEEMKSSGCTPDEVTYNILIDH 451

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPR-TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
           L    K   AL  L + +E    PR T+T+N +I ALC + +I++A  +   M       
Sbjct: 452 LCSMGKLGNAL-DLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISR 510

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           S  +++ LI  L + ++  DA  L    +K+G+ P
Sbjct: 511 SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQP 545



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 185/382 (48%), Gaps = 6/382 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + D + ++G +  V  +N ++  L    E + A    ++    G  P++ TF+ +I  
Sbjct: 322 LKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVA 381

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
             ++N   EA  +   +   G  P+V TF IL+N+LCK G     + + ++M   GC P+
Sbjct: 382 LSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPD 441

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L+  LC +G++  A ++L  ++++G      TY  ++D  CK  R  EA E+ +
Sbjct: 442 EVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFD 501

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +   +G++ + VTFNTL +G CK         L++ M K    P+ I+Y+++L    K G
Sbjct: 502 QMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQG 561

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            I+ A  I + M   GFE+D     +L+ GLC     +      A ++   M  K     
Sbjct: 562 NIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQV-----ALKLLRGMRIKGIRPT 616

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC-GEGKIDKALLLL 428
           P  Y  VI++L +     +AL       E+G  P  +T+  V ++LC G G I +A   L
Sbjct: 617 PKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFL 676

Query: 429 FLMYEHAKIPSRTSYDMLITKL 450
             M     +P  +S+ ML   L
Sbjct: 677 VEMVNKGFMPEFSSFRMLAEGL 698



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 51/236 (21%), Positives = 93/236 (39%), Gaps = 9/236 (3%)

Query: 244 AMELLNEAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           A+ +LN A+ R    P+   +  +       G      GL++ M++       +   + +
Sbjct: 72  ALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFV 131

Query: 303 NGLLKWGKIRPAVSIFKEMV---RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
               +  +   AV +    +    FG + D  + N LL  L   S  +  LLE    V+ 
Sbjct: 132 ESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGS--KLKLLE---SVYN 186

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +MT +    D  T   +I+ L +  +   A++ L      G  P   TF  ++Q    EG
Sbjct: 187 EMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEG 246

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            I+ AL +   M E    P+  + ++LI    ++ +  DA       +  G  P +
Sbjct: 247 SIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQ 302


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 184/356 (51%), Gaps = 5/356 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
            ++FF E    G  PN  T++ MI  YC      EA   +  M   G  PN+ TF +++N
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LC+ GRLKE  EVL +M R G  P+  TYN L+ G C  G   +A  +   +  +GL P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V TYT++++  CK G  N AME  ++   RG+ PN  T+ T+ NG+ ++G   +   +L
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M +   +P  ++Y+ L+NG    G++  A+ + ++MV  G   D    ++++ G    
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISG---- 237

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
            +     L+ A+Q+  +M  K  + D  TY  +I+ L + ++  EA       + +   P
Sbjct: 238 -FARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPP 296

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
              T+  +I A C EG ++KAL L   M +   +P   +Y++LI  L++  +S +A
Sbjct: 297 DEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEA 352



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 191/383 (49%), Gaps = 7/383 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           F  ++++G   +V  +N ++     L   + A  F       GL PN  TF+++I   C 
Sbjct: 6   FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
                E  +V+  M   GY P+  T+  LVN  CK G   +AL +  +M R G  PN+ T
Sbjct: 66  DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y  L+  +C  G +  A E    +   GL P+  TYT +++GF + G  +EA  +LNE  
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
             G  P++VT+N L NG+C  G   + +GLL+ M  +  LPD +SYST+++G  +  ++ 
Sbjct: 186 RSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELD 245

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A  +  EM+      D    +SL++GLC     E+  L +A  +F++M       D  T
Sbjct: 246 RAFQMKVEMIGKSVLPDAVTYSSLIQGLC-----EQRRLTEACDMFQEMLTIKLPPDEFT 300

Query: 373 YGIVIRTLGKGKKTDEALIHLH-HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           Y  +I    K    ++AL HLH   I+ G +P  +T+N +I  L  + +  +A  LL  +
Sbjct: 301 YTTLINAYCKEGDLNKAL-HLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359

Query: 432 YEHAKIPSRTSYDMLITKLDQLE 454
           +    IPS  +Y+ LI     +E
Sbjct: 360 FYDDSIPSAVTYNTLIENCCNIE 382



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 202/422 (47%), Gaps = 20/422 (4%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E      S+   G   ++  FN ++  L      +   +   E S  G  P+  T++ ++
Sbjct: 36  EAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLV 95

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             YC + +F +A  +   M  NG  PNV T+T L+NS+CK+G L  A+E  DQM   G  
Sbjct: 96  NGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLC 155

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN +TY  ++ G    G ++EAY +L  +   G  P + TY A+++G C +GR  EA+ L
Sbjct: 156 PNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGL 215

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L + + +GV P+VV+++T+ +G+ +     +   +   M  ++ LPD ++YS+L+ GL +
Sbjct: 216 LQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCE 275

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
             ++  A  +F+EM+      DE    +L+   C    +E D L  A  + ++M +K  +
Sbjct: 276 QRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYC----KEGD-LNKALHLHDEMIQKGFL 330

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ-------------- 413
            D  TY ++I  L K  ++ EA   L        IP  +T+N +I+              
Sbjct: 331 PDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALV 390

Query: 414 -ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
              C +G +D+A  +   M      P+   Y+++I    ++     A  LY   +    +
Sbjct: 391 KGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFV 450

Query: 473 PQ 474
           P 
Sbjct: 451 PH 452



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 163/328 (49%), Gaps = 5/328 (1%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M  NG  PNV T+  +++  CK  R  EA   L  MG  G +PN+ T+N ++ GLC  GR
Sbjct: 9   MERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGR 68

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++E  E+L+ +   G  PD  TY  +++G+CK G  ++A+ L  E +  G++PNVVT+ +
Sbjct: 69  LKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTS 128

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L N  CK G   + +     M  R   P++ +Y+T++NG  + G +  A  +  EM R G
Sbjct: 129 LINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSG 188

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
           F       N+L+ G C+        +E+A  + + M  K  + D  +Y  +I    + ++
Sbjct: 189 FIPSIVTYNALINGHCVLGR-----MEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D A       I    +P  +T++++IQ LC + ++ +A  +   M      P   +Y  
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTT 303

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           LI    +      A  L+   +++G +P
Sbjct: 304 LINAYCKEGDLNKALHLHDEMIQKGFLP 331



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 176/399 (44%), Gaps = 45/399 (11%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LKE  ++   + + G       +N L+           A+   +E    GL+PN  T++ 
Sbjct: 69  LKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTS 128

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C   +   A +  D M   G  PN  T+T ++N   + G L EA  VL++M R G
Sbjct: 129 LINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSG 188

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+I TYN L+ G C +GR+EEA  +L ++   G+ PDV +Y+ ++ GF +    + A 
Sbjct: 189 FIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAF 248

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++  E I + V P+ VT+++L  G C++    +   + + M      PD+ +Y+TL+N  
Sbjct: 249 QMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAY 308

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL------------------------- 340
            K G +  A+ +  EM++ GF  D    N L+ GL                         
Sbjct: 309 CKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSA 368

Query: 341 --------------------CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
                                +K +  K L+++A QVFE M  K    +   Y ++I   
Sbjct: 369 VTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGH 428

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            +     +A       + +  +P T+T   +++AL  EG
Sbjct: 429 CRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEG 467



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 5/195 (2%)

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
           G+   K M++  CLP+ ++Y+T+++G  K  +   A    + M   G E +    N ++ 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           GLC         L++  +V  +M++K  V D  TY  ++    K     +AL+     + 
Sbjct: 62  GLCRDGR-----LKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVR 116

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G  P  +T+ ++I ++C  G +++A+     M+     P+  +Y  +I    Q     +
Sbjct: 117 NGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDE 176

Query: 459 ACALYGAALKQGVIP 473
           A  +     + G IP
Sbjct: 177 AYRVLNEMTRSGFIP 191



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/256 (20%), Positives = 89/256 (34%), Gaps = 50/256 (19%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L        A   F E  +  L P+ +T++ +I  YC + D  +A  + D M 
Sbjct: 266 YSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMI 325

Query: 148 DNGYHPNVTTFTILVNSL------------------------------------------ 165
             G+ P+  T+ +L+N L                                          
Sbjct: 326 QKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKS 385

Query: 166 --------CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
                   C  G + EA +V + M     KPN   YN ++ G C +G V +AY++   + 
Sbjct: 386 AVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMV 445

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           +    P   T  A++      G   E  E++ + +      +      L     KEG   
Sbjct: 446 HVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMD 505

Query: 278 KGVGLLKLMKKRNCLP 293
               LL  M K   +P
Sbjct: 506 MVFNLLTEMAKDGLIP 521


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 204/388 (52%), Gaps = 5/388 (1%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           S F+ LL A+V +    TA+  F++  S G++P+  TF+I+I CY +++    A  ++  
Sbjct: 56  SVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLAT 115

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           +  +GY PN+ TF  ++N  C +G + +AL+    +   G   +  TY  L+ GL   G+
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQ 175

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++ A  +L  ++   ++P++  Y+A++DG CK G  ++A+ L ++  ERG+  + VT+N+
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNS 235

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G C  G   +   LL  M + N  PD  +++ L++ L K G+I  A  +   M + G
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            + D    N+L+ G C      ++ + +A ++F +M K+    D   Y ++I    K K 
Sbjct: 296 EKPDIVTYNALMEGYC-----SRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            DEA++          +P   ++N++I  LC  G+I     LL  M+  A+ P   +Y++
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           LI  L +  +  +A  +    +K+GV P
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKP 438



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 199/411 (48%), Gaps = 6/411 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   +   + K G    +  +N L+           A + F+     GL P+  
Sbjct: 277 KEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVL 336

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++++I  YC      EA  +   + +    P + ++  L++ LC SGR+    ++LD+M
Sbjct: 337 NYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM 396

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P++ TYN L+  LC  GR+ EA  +L+ +   G+KP++ TY A+MDG+C     
Sbjct: 397 HGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNV 456

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           N A ++ N  ++ G+ P+++ +N L NGYCK     + + L K M+ +N +PD  SY++L
Sbjct: 457 NVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL   G+I     +  EM   G   D    N LL   C     +K     A  +F ++
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDK-----AISLFRQI 571

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            + +   D  T   ++  L KG+K   A   L H +  G  P   T+  +I ALC +G  
Sbjct: 572 VEGIW-PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSF 630

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            +A+LLL  M ++ + P   +++++I  L Q  ++  A  L    + +G++
Sbjct: 631 GEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 199/412 (48%), Gaps = 6/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K  + +   ++K     ++  ++ L+  L        A+   S+    G+  ++ 
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C+   + E  +++  M      P+  TF IL+++LCK GR+ EA  VL  M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G KP+I TYN L++G C    V EA E+   +   GL+PDV  Y  ++DG+CK    
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EAM L  E   + + P + ++N+L +G C  G       LL  M      PD ++Y+ L
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K G+I  A+ +   M++ G + +    N+++ G C+++      +  A  +F +M
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN-----VNVAKDIFNRM 466

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K     D   Y ++I    K +  DEA++          IP   ++N++I  LC  G+I
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                LL  M +  + P   +Y++L+    + +    A +L+   + +G+ P
Sbjct: 527 PHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLF-RQIVEGIWP 577



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 152/308 (49%), Gaps = 5/308 (1%)

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           C+   + +A+   ++M R+   P    ++ LL  +  +G    A  +   +++ G+ P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            T+T +++ +     +  A  LL   ++ G  PN+VTFNT+ NG+C  G   K +   + 
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           +  +  L D+ +Y TL+NGL K G+I+ A+ + +EM +   + +  M ++L+ GLC   +
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                + DA  +  ++ ++  + D  TY  +I       +  E    L   +     P  
Sbjct: 211 -----VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDD 265

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
            TFN +I ALC EG+I +A  +L +M +  + P   +Y+ L+      E  ++A  L+  
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNR 325

Query: 466 ALKQGVIP 473
            +K+G+ P
Sbjct: 326 MVKRGLEP 333


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 204/458 (44%), Gaps = 38/458 (8%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+  Q  +D + K   + E + + + +   G    V+ FN ++     LN      K 
Sbjct: 243 PNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKL 302

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK-------------------------- 141
                  G  PN  T+  ++   C      EA+                           
Sbjct: 303 VDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRL 362

Query: 142 ------VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
                 V D M +NGY P+V TF+ LVN LCK G    ALE+++ M   GCKPN+ TY  
Sbjct: 363 NEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTI 422

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G C  G++EEA  +L  +   G   +   Y A++   CK G+ +EA+++  E   +G
Sbjct: 423 LIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKG 482

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             P++ TFN+L  G C+       + L + M     + + ++++TL++  L+ G+I+ A+
Sbjct: 483 CKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEAL 542

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +  +M+  G  +DE   N L++ LC     EK L      +FE+M +K       T  I
Sbjct: 543 KLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGL-----GLFEEMIRKGLTPSIITCNI 597

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I       K   AL  +   I  G  P  +T+N++I  LC  G+I +AL L   +    
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             P   +Y+ LI  L +     DAC L    ++ G +P
Sbjct: 658 IQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVP 695



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 190/389 (48%), Gaps = 6/389 (1%)

Query: 69  RIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF-FSEASSYGLAPNSWTFSIMI 127
           RID   ++       +V  FN L+   V       A  F + +  + G  P+ +TFS ++
Sbjct: 330 RIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLV 389

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C K  F  A ++++ M   G  PN+ T+TIL++  CK G+L+EA  +L +M   G  
Sbjct: 390 NGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFS 449

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            N   YN L+  LC  G++ EA +M   + + G KPD++T+ +++ G C+V    +A+ L
Sbjct: 450 LNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALAL 509

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             + +  GV  N VTFNTL + + + G   + + L+  M  R C  D+I+Y+ L+  L K
Sbjct: 510 YRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCK 569

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G +   + +F+EM+R G        N L+ G C         + +A +    M  +   
Sbjct: 570 TGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGK-----VHNALEFMRDMIHRGFS 624

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  TY  +I  L K  +  EAL         G  P +IT+N +I  LC EG  D A  L
Sbjct: 625 PDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFL 684

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           L+   E+  +P+  ++++L+    +   S
Sbjct: 685 LYRGVENGFVPNDVTWNILVYNFGKQSNS 713



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 204/435 (46%), Gaps = 37/435 (8%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  +   G + +   F  ++ AL M+NE + A     + + +G  PNS  +  +I   
Sbjct: 196 NVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDAL 255

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             ++   EA K+++ MF  G  P+V TF  ++   C+  R+ E  +++D+M   G  PN 
Sbjct: 256 SKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPND 315

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVK--------------------------------N 218
            TY  L+ GLC   R++EA  +L  V                                 N
Sbjct: 316 MTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMIN 375

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +G  PDV+T++ +++G CK G    A+EL+N+   +G  PN+ T+  L +G+CK+G   +
Sbjct: 376 NGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEE 435

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              +L+ M  +    + + Y+ L++ L K GKI  A+ +F EM   G + D    NSL+ 
Sbjct: 436 AGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIF 495

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           GLC       D +EDA  ++  M  +  + +  T+  +I    +  +  EAL  ++  + 
Sbjct: 496 GLC-----RVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLF 550

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G     IT+N +I+ALC  G ++K L L   M      PS  + ++LI       K ++
Sbjct: 551 RGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHN 610

Query: 459 ACALYGAALKQGVIP 473
           A       + +G  P
Sbjct: 611 ALEFMRDMIHRGFSP 625



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 202/423 (47%), Gaps = 37/423 (8%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S   +N +L  LV+ N    A   F +  S G++PN +TF ++++  C  N+   A  ++
Sbjct: 174 SFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLL 233

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M  +G  PN   +  L+++L K  R+ EAL++L++M  +GC P++ T+N ++ G C +
Sbjct: 234 RDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRL 293

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL---------------- 247
            RV E  +++  +   G  P+  TY  +M G CK  R +EA  L                
Sbjct: 294 NRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLV 353

Query: 248 --------LNEA--------IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
                   LNEA        I  G  P+V TF+TL NG CK+G     + L+  M  + C
Sbjct: 354 NGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGC 413

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P+  +Y+ L++G  K G++  A  I +EM+  GF ++    N+L+  LC     +   +
Sbjct: 414 KPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC-----KHGKI 468

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
            +A  +F +M+ K    D  T+  +I  L +  + ++AL      +  G I  ++TFN +
Sbjct: 469 HEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTL 528

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I A    G+I +AL L+  M          +Y+ LI  L +         L+   +++G+
Sbjct: 529 IHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGL 588

Query: 472 IPQ 474
            P 
Sbjct: 589 TPS 591



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 177/360 (49%), Gaps = 10/360 (2%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           Y   P+  ++++++      N    A  V   M   G  PN  TF +++ +LC    +  
Sbjct: 169 YCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDN 228

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A  +L  M + GC PN   Y  L+  L    RV+EA ++L  +   G  PDV T+  V+ 
Sbjct: 229 ACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIY 288

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           GFC++ R  E  +L++  I +G TPN +T+  L +G CK     +   LL  +      P
Sbjct: 289 GFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----P 344

Query: 294 DKISYSTLLNGLLKWGKIRPAVS-IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           + + ++TL+NG ++ G++  A + ++ +M+  G+  D    ++L+ GLC     +K L  
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLC-----KKGLFG 399

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A ++   M  K    +  TY I+I    K  + +EA + L   +  G    T+ +N +I
Sbjct: 400 SALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALI 459

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            ALC  GKI +AL +   M      P   +++ LI  L ++++  DA ALY   + +GVI
Sbjct: 460 SALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVI 519



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 143/286 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   I   +   G + +   +N L+ AL    +   A+  F E SS G  P+ +
Sbjct: 429 KKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIF 488

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C  ++  +A  +   M   G   N  TF  L+++  + G ++EAL++++ M
Sbjct: 489 TFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDM 548

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +  TYN L+K LC  G VE+   +   +   GL P + T   +++GFC  G+ 
Sbjct: 549 LFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKV 608

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+E + + I RG +P++VT+N+L NG CK G   + + L + ++     PD I+Y+TL
Sbjct: 609 HNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTL 668

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +  L + G    A  +    V  GF  ++   N L+     +S  E
Sbjct: 669 ICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSE 714



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 87/181 (48%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   ++E + + + +   G       +N L+ AL      E  +  F E    GL P+ 
Sbjct: 533 LRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSI 592

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T +I+I  +C       A + +  M   G+ P++ T+  L+N LCK GR++EAL + ++
Sbjct: 593 ITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEK 652

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           +   G +P+  TYN L+  LC  G  ++A  +L     +G  P+  T+  ++  F K   
Sbjct: 653 LQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSN 712

Query: 241 S 241
           S
Sbjct: 713 S 713


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 194/394 (49%), Gaps = 5/394 (1%)

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
           +++  F  LL+ L   +  + A   + +  + G+ P+  TF+ MI   C K    EA+ +
Sbjct: 165 YTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLI 224

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           +  +F    +PN  T+T L+   C++  L  A  + D+M + GC PN  TY+ L+ GLC 
Sbjct: 225 MSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCS 284

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            GR+EEA +ML  +   G++P VYTYT  +   C  G S+EA+ELL +  +RG  PN+ T
Sbjct: 285 EGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           F  L +G  ++G     +GL   M     +P  ++Y+ L+N L   G+   A +IFK M+
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWML 404

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
             G     +  N +++  C+    +K ++     +F+KM K  S  +  TY  +I    K
Sbjct: 405 SHGSLPSTQTYNEIIKCFCLMGDIQKAMV-----IFDKMLKAGSSPNVITYNTLIYGYCK 459

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
               + A+  L      G  P   T+  +I      GK++ A  L + M EH   P+  +
Sbjct: 460 QGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVT 519

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           Y  +I     L K  DA AL+   ++ G +P  +
Sbjct: 520 YTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 196/403 (48%), Gaps = 5/403 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D++  +   G   S+  FN ++  L      + A    S    Y   PN++T++ +I  +
Sbjct: 188 DMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGH 247

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C  ++   A  + D M  +G  PN  T++ L+N LC  GRL+EA+++L++M + G +P +
Sbjct: 248 CRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTV 307

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY   L  LC  G   EA E+L  +K  G  P++ T+TA++ G  + G+   A+ L ++
Sbjct: 308 YTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHK 367

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G+ P  VT+N L N  C EG       + K M     LP   +Y+ ++      G 
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I+ A+ IF +M++ G   +    N+L+ G C     ++  L +A ++ E M       D 
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYC-----KQGNLNNAMRLLEIMKGNGLKPDA 482

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I    +G K + A    +  +E G  P  +T+  +I       K+D AL L + 
Sbjct: 483 WTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWK 542

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M E   +PS  +Y+++I+   +     +A    G  +KQG++P
Sbjct: 543 MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLP 585



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 189/388 (48%), Gaps = 5/388 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + KDG + +   ++ L+  L      E A+    E    G+ P  +T++I +   C
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           +     EA +++  M   G  PN+ TFT L++ L + G+ + A+ +  +M   G  P   
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+  LC  GR E A+ +   + + G  P   TY  ++  FC +G   +AM + ++ 
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           ++ G +PNV+T+NTL  GYCK+G     + LL++MK     PD  +Y+ L++G  + GK+
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A S+F  M+  G   +     +++ G     +     ++DA  +F KM +  ++    
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDG-----YFNLAKVDDALALFWKMVESGNLPSSQ 553

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY ++I    K     EA       ++ G +P  IT+ + I  LC  G+   A  +   M
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDA 459
            +    P+  +Y  LI  L Q  ++ DA
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDA 641



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 182/382 (47%), Gaps = 7/382 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E +++   +KK G   ++  F  L+  L    + E A+  + +  + GL P + T++ +I
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALI 384

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +  F  A  +   M  +G  P+  T+  ++   C  G +++A+ + D+M + G  
Sbjct: 385 NQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS 444

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN+ TYN L+ G C  G +  A  +L  +K +GLKPD +TYT ++ GF + G+   A  L
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
               +E G++PN VT+  + +GY         + L   M +   LP   +Y+ +++G  K
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
              I  A +   +MV+ G   +     S + GLC            A+++F +M K+   
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL-----AFKIFHEMEKRNYF 619

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIH--LHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            +  TY  +I  L +  + ++A ++  L      G  P   T+  +++ LCGEG+  +A 
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
            L+  M +    PS   Y  L+
Sbjct: 680 QLVVSMQKKGLQPSEEIYRALL 701



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 188/413 (45%), Gaps = 7/413 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E +D+ + + + G   +V  +   L++L        AV+   +    G  PN  TF+ 
Sbjct: 288 LEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTA 347

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I        F  A  +   M  +G  P   T+  L+N LC  GR + A  +   M   G
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+ QTYN ++K  C +G +++A  +   +   G  P+V TY  ++ G+CK G  N AM
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL      G+ P+  T+  L +G+ + G       L   M +    P+ ++Y+ +++G 
Sbjct: 468 RLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
               K+  A+++F +MV  G     +  N ++ G     + + + + +A     KM K+ 
Sbjct: 528 FNLAKVDDALALFWKMVESGNLPSSQTYNVMISG-----FSKTNSISEAENFCGKMVKQG 582

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            + +  TY   I  L +  +T  A    H   +  + P   T++++I  LC EG+ + A 
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642

Query: 426 L--LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           +  LL  +  +   P+  +Y  L+  L    + Y+A  L  +  K+G+ P  +
Sbjct: 643 MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEE 695



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 177/392 (45%), Gaps = 9/392 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ + IFD + K G++ +V  +N L+           A++        GL P++WT++ 
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +        A  +   M ++G  PN  T+T +++      ++ +AL +  +M   G
Sbjct: 488 LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+ QTYN ++ G      + EA      +   GL P+V TYT+ +DG C+ GR+  A 
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG--VGLLKLMKKRNCLPDKISYSTLLN 303
           ++ +E  +R   PN+ T+++L  G C+EG         LL  +    C P+  +Y+TL+ 
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVK 667

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-LEDAYQVFEKMT 362
           GL   G+   A  +   M + G +  E +  +LL G C      K+L +E A  +F  M 
Sbjct: 668 GLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGEC------KNLKVESALNIFYSMD 721

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
                     Y  +I  L K    +EA       +E       + +  ++  L  EG+ D
Sbjct: 722 TLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETD 781

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
             L LL +M       +  +Y ML  +L  L+
Sbjct: 782 LCLKLLHVMESRNCTLNFQTYVMLARELSALD 813



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 161/335 (48%), Gaps = 7/335 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   + + + +K +G       + +L+       + E A   F     +G++PN  
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  Y N     +A  +   M ++G  P+  T+ ++++   K+  + EA     +M
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM 578

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  PN+ TY   + GLC  GR   A+++   ++     P++YTY++++ G C+ GR+
Sbjct: 579 VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638

Query: 242 NEA--MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
            +A    LL      G  PNV T+ TL  G C EG   +   L+  M+K+   P +  Y 
Sbjct: 639 EDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYR 698

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            LL G  K  K+  A++IF  M   GF++      +L+  LC     +++ +E+A  +F+
Sbjct: 699 ALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALC-----KENFIEEAQCIFQ 753

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            M +K   +D   + +++  L K  +TD  L  LH
Sbjct: 754 TMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLH 788



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 2/242 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + + E  +    + K G   +V  +   +  L        A K F E       PN +
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623

Query: 122 TFSIMIRCYCNKNDFFEAR--KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           T+S +I   C +    +A    ++  +   G  PNV T+T LV  LC  GR  EA +++ 
Sbjct: 624 TYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVV 683

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M + G +P+ + Y  LL G C   +VE A  +  ++   G +  +  Y A++   CK  
Sbjct: 684 SMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKEN 743

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
              EA  +    +E+    + V +  L +G  KEG     + LL +M+ RNC  +  +Y 
Sbjct: 744 FIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYV 803

Query: 300 TL 301
            L
Sbjct: 804 ML 805


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 193/393 (49%), Gaps = 7/393 (1%)

Query: 84  SVSDFNDLLMALVMLNEQE--TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           S+ +FN +L ++V  N     TA+    +    G+ P   TF+I++ CYC+  +   A  
Sbjct: 56  SIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFS 115

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           +   +   GYHP   TF  L+N +C +G+LKEAL   D +  +G   +  +Y  L+ GLC
Sbjct: 116 IFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLC 175

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
            +G    A +ML  ++   +  DV  Y  +++  CK    ++A +L +E I + ++P+VV
Sbjct: 176 KIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVV 235

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           TFN+L  G+C  G   +  GL   M  +N  PD  ++S L++ L K G I  A ++   M
Sbjct: 236 TFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVM 295

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           ++ G   D    +SL+ G C+ +   K     A  VF  M++        +Y I+I  LG
Sbjct: 296 MKQGVIPDVVTYSSLMDGYCLVNEVNK-----AKHVFSTMSRLGVAPHAHSYNIMINGLG 350

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K K  DEAL         G  P T+T+N++I  LC  G+I  A  L+  M+ +       
Sbjct: 351 KIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADIL 410

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +Y+ LI  L +      A AL      QG+ P 
Sbjct: 411 TYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPS 443



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 161/305 (52%), Gaps = 5/305 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  FN L++   ++ + + A   F E     + P+ +TFSI++   C   +   A+ ++ 
Sbjct: 234 VVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLA 293

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G  P+V T++ L++  C    + +A  V   M R+G  P+  +YN ++ GL  + 
Sbjct: 294 VMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIK 353

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            V+EA  +   +   G+ PD  TY +++DG CK+GR + A +L++E    G+  +++T+N
Sbjct: 354 MVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYN 413

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           +L +  CK     K + L+K +K +   P   +Y+ L++GL K G+++ A  +F++++  
Sbjct: 414 SLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIK 473

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G+ V+    N ++ GLC     ++ L  +A  +  KM     + D  TY  +IR L +  
Sbjct: 474 GYSVNAWTYNIMINGLC-----KEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKD 528

Query: 385 KTDEA 389
           + ++A
Sbjct: 529 ENEKA 533



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 193/421 (45%), Gaps = 9/421 (2%)

Query: 40  AESLDLKENPRSLQAQRFVDRIKAS-PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVML 98
           A+ L L  +P ++     ++ I  +  LKE +   D +   G +     +  L+  L  +
Sbjct: 118 AKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKI 177

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
            E   A++   +     +  +   ++I+I   C      +A ++   M      P+V TF
Sbjct: 178 GETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTF 237

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
             L+   C  G+LKEA  +  +M      P++ T++ L+  LC  G +  A  ML  +  
Sbjct: 238 NSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMK 297

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            G+ PDV TY+++MDG+C V   N+A  + +     GV P+  ++N + NG  K     +
Sbjct: 298 QGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDE 357

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            + L K M  +   PD ++Y++L++GL K G+I  A  +  EM   G   D    NSL+ 
Sbjct: 358 ALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLID 417

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
            LC     +K     A  + +K+  +       TY I+I  L KG +   A       + 
Sbjct: 418 VLCKNHHIDK-----AIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLI 472

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEK 455
            G+     T+N +I  LC EG  ++A +LL  M  +  IP   +Y+ +I  L   D+ EK
Sbjct: 473 KGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEK 532

Query: 456 S 456
           +
Sbjct: 533 A 533



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 173/353 (49%), Gaps = 5/353 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF  I K G + +   FN L+  + +  + + A+ F     + G   +  ++  +I   C
Sbjct: 116 IFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLC 175

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +   A +++  +     + +V  + I++NSLCK   + +A ++  +M      P++ 
Sbjct: 176 KIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVV 235

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+N L+ G C VG+++EA+ +   +    + PDVYT++ ++D  CK G    A  +L   
Sbjct: 236 TFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVM 295

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++GV P+VVT+++L +GYC      K   +   M +    P   SY+ ++NGL K   +
Sbjct: 296 MKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMV 355

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+S+FKEM   G   D    NSL+ GLC     +   +  A+Q+ ++M       D  
Sbjct: 356 DEALSLFKEMCCKGIAPDTVTYNSLIDGLC-----KLGRISYAWQLVDEMHNNGIPADIL 410

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           TY  +I  L K    D+A+  +    + G  P   T+N +I  LC  G++  A
Sbjct: 411 TYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNA 463


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 211/451 (46%), Gaps = 40/451 (8%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++ S +K    ++  +   G    V  FN L+ AL   ++  TAV    E SS G+AP+ 
Sbjct: 157 VEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDE 216

Query: 121 WTFS-----------------------------------IMIRCYCNKNDFFEARKVIDC 145
            TF+                                   ++I  YC      +A   I  
Sbjct: 217 TTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
              +G+ P+  T+   VN LC++  +  AL+V+D M + G  P++ TYN ++  LC  G+
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +EEA  +L  + + G  PD+ T+  ++   C   R  EA++L  +   +GV+P+V TFN 
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L N  CK G P   + L + MK   C PD+++Y+TL++ L   GK+  A+ + K+M   G
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   N+++ GLC K       +E+A +VF++M  +    +  T+  +I  L K KK
Sbjct: 457 CPRSTITYNTIIDGLCKKMR-----IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+A   ++  I  G  P  IT+N+++   C +G I KA  +L  M  +       +Y  
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           LI  L +  ++  A  +      +G+ P  K
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPK 602



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 194/394 (49%), Gaps = 5/394 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G + +    N L+     L   E A+ +  +  + G  P+  T++  +   C  +    A
Sbjct: 246 GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHA 305

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            KV+D M   G+ P+V T+ I+VN LCK+G+L+EA  +L+QM   GC P+I T+N L+  
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC   R+EEA ++   V   G+ PDVYT+  +++  CKVG  + A+ L  E    G TP+
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VT+NTL +  C  G   K + LLK M+   C    I+Y+T+++GL K  +I  A  +F 
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           +M   G   +    N+L+ GLC     +   ++DA+++  +M  +    +  TY  ++  
Sbjct: 486 QMDLQGISRNAITFNTLIDGLC-----KDKKIDDAFELINQMISEGLQPNNITYNSILTH 540

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
             K     +A   L      G     +T+  +I  LC  G+   AL +L  M      P+
Sbjct: 541 YCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPT 600

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y+ ++  L +     DA +L+    + G  P
Sbjct: 601 PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP 634



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 205/408 (50%), Gaps = 8/408 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   I + +   G    ++ FN L+ AL   N  E A+    + +  G++P+ +
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I+I   C   D   A ++ + M ++G  P+  T+  L+++LC  G+L +AL++L  M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +  TYN ++ GLC   R+EEA E+   +   G+  +  T+  ++DG CK  + 
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A EL+N+ I  G+ PN +T+N++   YCK+G   K   +L+ M       D ++Y TL
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K G+ + A+ + + M   G     +  N +L+ L       ++ + DA  +F +M
Sbjct: 573 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF-----RRNNIRDALSLFREM 627

Query: 362 TKKVSVTDPGTYGIVIRTLGK-GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            +     D  TY IV R L + G    EA   +   ++ G IP   +F  + + L   G 
Sbjct: 628 AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
            D  +  + ++ E  K+  R S    I    ++ K YDA A +G  L+
Sbjct: 688 DDYFIRAIEIIME--KVDLRESDVSAIRGYLKIRKFYDALATFGRFLE 733



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 185/382 (48%), Gaps = 6/382 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + D + ++G +  V  +N ++  L    + E A    ++    G  P+  TF+ +I  
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C  N   EA  +   +   G  P+V TF IL+N+LCK G    AL + ++M   GC P+
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L+  LC +G++ +A ++L ++++ G      TY  ++DG CK  R  EA E+ +
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +   +G++ N +TFNTL +G CK+        L+  M      P+ I+Y+++L    K G
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG 545

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            I+ A  I + M   GFEVD     +L+ GLC     +      A +V   M  K     
Sbjct: 546 DIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV-----ALKVLRGMRIKGMRPT 600

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC-GEGKIDKALLLL 428
           P  Y  V+++L +     +AL       E+G  P  +T+  V + LC G G I +A   +
Sbjct: 601 PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFM 660

Query: 429 FLMYEHAKIPSRTSYDMLITKL 450
             M +   IP  +S+ ML   L
Sbjct: 661 LEMVDKGFIPEFSSFRMLAEGL 682



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G   +   +  L+N L +  ++K    V  +MG  G KP++ T+N L+K LC   +V  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             ML  + + G+ PD  T+T +M GF + G    A+ +    +E G +   VT N L NG
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YCK G     +G ++        PD+I+Y+T +NGL +   +  A+ +   MV+ G + D
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N ++  LC         LE+A  +  +M  +  + D  T+  +I  L  G + +EA
Sbjct: 321 VFTYNIVVNCLCKNGQ-----LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           L         G  P   TFN +I ALC  G    AL L   M      P   +Y+ LI  
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435

Query: 450 LDQLEK 455
           L  L K
Sbjct: 436 LCSLGK 441



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 5/152 (3%)

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
           FG + D  + N LL  L   S  +  LLE    V+ +M  +    D  T+  +++ L + 
Sbjct: 140 FGIQADTVVYNHLLNVLVEGS--KMKLLE---SVYSEMGARGIKPDVVTFNTLMKALCRA 194

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            +   A++ L      G  P   TF  ++Q    EG I+ AL +   M E     ++ + 
Sbjct: 195 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           ++LI    +L +  DA       +  G  P +
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 286



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 27/194 (13%)

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV------------- 322
           P++  G  +L+      PD  +   +LN  L      P   +++E++             
Sbjct: 35  PLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMK 94

Query: 323 -------RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ-VFEKMTKKVSV-TDPGTY 373
                  R G +V   +++S L      S+E + L +DA   +  ++     +  D   Y
Sbjct: 95  VLVAEMRREGHQVKLGVVHSFL-----DSYEGQQLFDDAVDLILNQLQPLFGIQADTVVY 149

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             ++  L +G K              G  P  +TFN +++ALC   ++  A+L+L  M  
Sbjct: 150 NHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS 209

Query: 434 HAKIPSRTSYDMLI 447
               P  T++  L+
Sbjct: 210 RGVAPDETTFTTLM 223


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 211/424 (49%), Gaps = 11/424 (2%)

Query: 55  QRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY 114
           QR  ++  +  L  ++     +   G   +V  FN ++       + ++A K        
Sbjct: 156 QRLCNKYNSVELASKV--LGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEK 213

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN +TF+I+I   C  N   EA+++++ M   G  PNV T++ ++N LCK G++ +A
Sbjct: 214 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDA 273

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            E+   M R  C PN+ T+N L+ GLC   R+EEA ++   ++  G  PD+ TY +++DG
Sbjct: 274 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 333

Query: 235 FCKVGRSNEAMELLNEAIERGVTP-NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
            CK  + +EA +L     E GV+  N VT++TLF+GY   G       +  ++  +   P
Sbjct: 334 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 393

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D  +Y++L+    K  +    V + +EM   GF      ++++L GL      E +  E 
Sbjct: 394 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGL-----FEGNHTER 448

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI---PRTITFNN 410
           A Q+F+ M  +    D   Y +V+  + +  K ++AL  L   I+       P +   + 
Sbjct: 449 AIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDA 508

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           ++++LC  G+ D A  LL  M E     + +SY+ L++ L +L++  +A  ++ A +  G
Sbjct: 509 LVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAG 568

Query: 471 VIPQ 474
             P+
Sbjct: 569 PAPE 572



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 188/393 (47%), Gaps = 43/393 (10%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN +T+ I+IR + +  D   A ++++ M  NG+  N    T L+  LC +GR+ EALE 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
              M +  C P++ TY  L+  LC  G+ +EA  ML  +   G  PD  T++ ++DG CK
Sbjct: 67  FRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 238 VGRSNEAMELLNEAIERGV------------------------------------TPNVV 261
            G   +A  +L + I+RG+                                    TP V+
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            FN + NG+CK         LL++M ++ C+P+  +++ L+ GL K  ++  A  + ++M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           V  G   +    ++++ GLC +       ++DAY++F+ M ++    +  T+ I+I  L 
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQ-----VDDAYELFQLMERRNCPPNVVTHNILIDGLC 300

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA-KIPSR 440
           K K+ +EA    H   E G  P  IT+N++I  LC   ++D+A  L   + E      + 
Sbjct: 301 KAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANA 360

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +Y  L      L +  DAC ++   + +G  P
Sbjct: 361 VTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 393



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 182/391 (46%), Gaps = 43/391 (10%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L   I + + +K +G   +      L+  L        A++ F  A +   AP+  T
Sbjct: 22  AGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHF-RAMAKDCAPDVMT 80

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ-- 180
           ++ ++   C    F EA+ ++  M   G  P+  TF+ L++ LCK G  ++A  VL+   
Sbjct: 81  YTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVI 140

Query: 181 -------------------------------MGRI---GCKPNIQTYNCLLKGLCYVGRV 206
                                          +G +   G  P +  +N ++ G C    +
Sbjct: 141 QRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDL 200

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           + AY++L  +   G  P+V+T+T ++ G CK  R  EA +LL + +  G +PNVVT++T+
Sbjct: 201 DSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTV 260

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            NG CK+G       L +LM++RNC P+ ++++ L++GL K  +I  A  ++  M   G 
Sbjct: 261 INGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGC 320

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK-VSVTDPGTYGIVIRTLGKGKK 385
             D    NSL+ GLC KS++    +++A+Q+F+ + +  VS  +  TY  +        +
Sbjct: 321 APDIITYNSLIDGLC-KSFQ----VDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 375

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
             +A       ++ G  P   T+ ++I   C
Sbjct: 376 MADACRIFSMLVDKGFSPDLATYTSLILEYC 406



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 193/415 (46%), Gaps = 7/415 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L     + + + + G   +V  F  L+  L   N    A +   +  + G +PN  
Sbjct: 196 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVV 255

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I   C +    +A ++   M      PNV T  IL++ LCK+ R++EA ++  +M
Sbjct: 256 TYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 315

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK-PDVYTYTAVMDGFCKVGR 240
              GC P+I TYN L+ GLC   +V+EA+++   +   G+   +  TY+ +  G+  +GR
Sbjct: 316 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 375

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  + +  +++G +P++ T+ +L   YCK    ++ V L++ M  +   P   + S 
Sbjct: 376 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 435

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL--LEDAYQVF 358
           +L GL +      A+ +F  M   G   D  + N ++ G+   S   K L  LE   QV 
Sbjct: 436 VLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLE---QVI 492

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           +K  +K + +      +V  +L +  +TD+A   LH   E G      ++N ++  L   
Sbjct: 493 DKRDRKFNPSSSAVDALV-ESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRL 551

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            + D+A  +   M      P  ++ +++I+ L    K  DA  L     K G  P
Sbjct: 552 QRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCP 606



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 156/325 (48%), Gaps = 35/325 (10%)

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M RI C PN  TY  L++G    G ++ A ++L  +K++G + +   +T +M G C  GR
Sbjct: 1   MARI-CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGR 59

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA+E    A+ +   P+V+T+  L +  CK G   +  G+L+ M  R C PD +++ST
Sbjct: 60  VVEALEHF-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFST 118

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS---------------- 344
           L++GL K+G    A  + +++++ G    +    ++++ LC K                 
Sbjct: 119 LIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAK 178

Query: 345 ----------------WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                            + KD L+ AY++ E M +K  V +  T+ I+I  L K  +  E
Sbjct: 179 GFTPTVLMFNLVINGFCKAKD-LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGE 237

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   L   +  G  P  +T++ VI  LC +G++D A  L  LM      P+  ++++LI 
Sbjct: 238 AQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILID 297

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L + ++  +A  LY    + G  P
Sbjct: 298 GLCKAKRIEEARQLYHRMRETGCAP 322



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/389 (21%), Positives = 159/389 (40%), Gaps = 79/389 (20%)

Query: 62  KASPLKERIDIFDSIKKDGTNWS-VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K+  + E   +F +I + G + +    ++ L      L     A + FS     G +P+ 
Sbjct: 336 KSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDL 395

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I  YC  +   E  ++++ M   G+ P V T + ++  L +    + A+++ D 
Sbjct: 396 ATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDS 455

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV---KNDGLKPDVYTYTAVMDGFCK 237
           M   GC  +   YN +++G+    +  +A  +L  V   ++    P      A+++  C+
Sbjct: 456 MAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 515

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           VGR+++A +LL++  ERG    V ++N L +G                            
Sbjct: 516 VGRTDDAKQLLHKMSERGFAAAVSSYNGLLSG---------------------------- 547

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
               L+ L +W +   A  +F+ MV  G   +   +N ++  LC  +      ++DAY++
Sbjct: 548 ----LSRLQRWDE---ATQVFEAMVSAGPAPEISTVNVVISWLCSAAK-----VDDAYEL 595

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            ++M+K                                   +G  P   T N +I   C 
Sbjct: 596 VQRMSK-----------------------------------LGCCPDIETCNTLIGGYCK 620

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            G+ D A  LL  M E    P+ T++D+L
Sbjct: 621 SGRADLARKLLEEMTEAGLEPNDTTHDLL 649


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 210/405 (51%), Gaps = 10/405 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I + ++  G    V  +N L+       E + A++     S   +AP+  T++ ++R  C
Sbjct: 164 IMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLC 220

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           +     EA +V+D       +P+V T+TIL+ + C    + +A+++LD+M + GCKP++ 
Sbjct: 221 DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 280

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G+C  GR++EA + L N+   G +P+V T+  ++   C  GR  +A  LL + 
Sbjct: 281 TYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADM 340

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           + +G +P+VVTFN L N  C++    + + +L+ M K  C+P+ +SY+ LL+G  +  K+
Sbjct: 341 LRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKM 400

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED-AYQVFEKMTKKVSVTDP 370
             A+   + MV  G   D    N+LL  LC      KD   D A ++  +++ K      
Sbjct: 401 DRAIEYLEIMVSRGCYPDIVTYNTLLTALC------KDGKADAAVEILNQLSSKGCSPVL 454

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  VI  L K  KT+ A   L      G  P  IT++ +++ L  EGK+D+A+ +   
Sbjct: 455 ITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHD 514

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           M   +  PS  +Y+ ++  L + +++  A       +++G  P +
Sbjct: 515 MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTK 559



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 187/363 (51%), Gaps = 5/363 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N +L +L    + + A++           P+  T++I+I   CN +   +A K++D
Sbjct: 209 VVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLD 268

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G  P+V T+ +L+N +CK GRL EA++ L+ M   GC+PN+ T+N +L+ +C  G
Sbjct: 269 EMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTG 328

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R  +A  +L ++   G  P V T+  +++  C+      A+++L +  + G  PN +++N
Sbjct: 329 RWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYN 388

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +G+C+E    + +  L++M  R C PD ++Y+TLL  L K GK   AV I  ++   
Sbjct: 389 PLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK 448

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G        N+++ GL      E      A ++ E+M +K    D  TY  ++R LG   
Sbjct: 449 GCSPVLITYNTVIDGLTKVGKTEY-----AAELLEEMRRKGLKPDIITYSTLLRGLGCEG 503

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           K DEA+   H    +   P  +T+N ++  LC   +  +A+  L  M E    P++ +Y 
Sbjct: 504 KVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYT 563

Query: 445 MLI 447
           +LI
Sbjct: 564 ILI 566



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 204/405 (50%), Gaps = 12/405 (2%)

Query: 73  FDSIKKDGTNWSVS--DF--NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
            +S   +G N S S  +F  N  L  LV   E E  +KF       G  P+    + +IR
Sbjct: 91  MESSSPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIR 150

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
            +C      +A ++++ + ++G  P+V T+ +L+   CKSG + +AL+VL+   R+   P
Sbjct: 151 GFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLE---RMSVAP 207

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           ++ TYN +L+ LC  G+++EA E+L         PDV TYT +++  C      +AM+LL
Sbjct: 208 DVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLL 267

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +E  ++G  P+VVT+N L NG CKEG   + +  L  M    C P+ I+++ +L  +   
Sbjct: 268 DEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCST 327

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G+   A  +  +M+R G        N L+  LC      K LL  A  V EKM K   + 
Sbjct: 328 GRWMDAERLLADMLRKGCSPSVVTFNILINFLC-----RKRLLGRAIDVLEKMPKHGCMP 382

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +  +Y  ++    + KK D A+ +L   +  G  P  +T+N ++ ALC +GK D A+ +L
Sbjct: 383 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEIL 442

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +      P   +Y+ +I  L ++ K+  A  L     ++G+ P
Sbjct: 443 NQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKP 487



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 168/318 (52%), Gaps = 5/318 (1%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + + + + D ++K G    V  +N L+  +      + A+KF +    YG  PN  T 
Sbjct: 258 SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITH 317

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           +I++R  C+   + +A +++  M   G  P+V TF IL+N LC+   L  A++VL++M +
Sbjct: 318 NIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 377

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            GC PN  +YN LL G C   +++ A E L  + + G  PD+ TY  ++   CK G+++ 
Sbjct: 378 HGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADA 437

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A+E+LN+   +G +P ++T+NT+ +G  K G       LL+ M+++   PD I+YSTLL 
Sbjct: 438 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLR 497

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL   GK+  A+ IF +M     +      N+++ GLC      + +   AY V EK  K
Sbjct: 498 GLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMV-EKGCK 556

Query: 364 KVSVTDPGTYGIVIRTLG 381
                   TY I+I  + 
Sbjct: 557 PTK----ATYTILIEGIA 570


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 211/451 (46%), Gaps = 40/451 (8%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++ S +K    ++  +   G    V  FN L+ AL   ++  TAV    E SS G+AP+ 
Sbjct: 157 VEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDE 216

Query: 121 WTFS-----------------------------------IMIRCYCNKNDFFEARKVIDC 145
            TF+                                   ++I  YC      +A   I  
Sbjct: 217 TTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
              +G+ P+  T+   VN LC++  +  AL+V+D M + G  P++ TYN ++  LC  G+
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +EEA  +L  + + G  PD+ T+  ++   C   R  EA++L  +   +GV+P+V TFN 
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L N  CK G P   + L + MK   C PD+++Y+TL++ L   GK+  A+ + K+M   G
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   N+++ GLC K       +E+A +VF++M  +    +  T+  +I  L K KK
Sbjct: 457 CPRSTITYNTIIDGLCKKMR-----IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+A   ++  I  G  P  IT+N+++   C +G I KA  +L  M  +       +Y  
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           LI  L +  ++  A  +      +G+ P  K
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPK 602



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 194/394 (49%), Gaps = 5/394 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G + +    N L+     L   E A+ +  +  + G  P+  T++  +   C  +    A
Sbjct: 246 GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHA 305

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            KV+D M   G+ P+V T+ I+VN LCK+G+L+EA  +L+QM   GC P+I T+N L+  
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC   R+EEA ++   V   G+ PDVYT+  +++  CKVG  + A+ L  E    G TP+
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VT+NTL +  C  G   K + LLK M+   C    I+Y+T+++GL K  +I  A  +F 
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           +M   G   +    N+L+ GLC     +   ++DA+++  +M  +    +  TY  ++  
Sbjct: 486 QMDLQGISRNAITFNTLIDGLC-----KDKKIDDAFELINQMISEGLQPNNITYNSILTH 540

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
             K     +A   L      G     +T+  +I  LC  G+   AL +L  M      P+
Sbjct: 541 YCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPT 600

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y+ ++  L +     DA +L+    + G  P
Sbjct: 601 PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP 634



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 205/408 (50%), Gaps = 8/408 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   I + +   G    ++ FN L+ AL   N  E A+    + +  G++P+ +
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I+I   C   D   A ++ + M ++G  P+  T+  L+++LC  G+L +AL++L  M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +  TYN ++ GLC   R+EEA E+   +   G+  +  T+  ++DG CK  + 
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A EL+N+ I  G+ PN +T+N++   YCK+G   K   +L+ M       D ++Y TL
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K G+ + A+ + + M   G     +  N +L+ L       ++ + DA  +F +M
Sbjct: 573 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF-----RRNNIRDALSLFREM 627

Query: 362 TKKVSVTDPGTYGIVIRTLGK-GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            +     D  TY IV R L + G    EA   +   ++ G IP   +F  + + L   G 
Sbjct: 628 AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
            D  +  + ++ E  K+  R S    I    ++ K YDA A +G  L+
Sbjct: 688 DDYFIRAIEIIME--KVDLRESDVSAIRGYLKIRKFYDALATFGRFLE 733



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 185/382 (48%), Gaps = 6/382 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + D + ++G +  V  +N ++  L    + E A    ++    G  P+  TF+ +I  
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C  N   EA  +   +   G  P+V TF IL+N+LCK G    AL + ++M   GC P+
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L+  LC +G++ +A ++L ++++ G      TY  ++DG CK  R  EA E+ +
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +   +G++ N +TFNTL +G CK+        L+  M      P+ I+Y+++L    K G
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG 545

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            I+ A  I + M   GFEVD     +L+ GLC     +      A +V   M  K     
Sbjct: 546 DIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV-----ALKVLRGMRIKGMRPT 600

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC-GEGKIDKALLLL 428
           P  Y  V+++L +     +AL       E+G  P  +T+  V + LC G G I +A   +
Sbjct: 601 PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFM 660

Query: 429 FLMYEHAKIPSRTSYDMLITKL 450
             M +   IP  +S+ ML   L
Sbjct: 661 LEMVDKGFIPEFSSFRMLAEGL 682



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G   +   +  L+N L +  ++K    V  +MG  G KP++ T+N L+K LC   +V  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             ML  + + G+ PD  T+T +M GF + G    A+ +    +E G +   VT N L NG
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YCK G     +G ++        PD+I+Y+T +NGL +   +  A+ +   MV+ G + D
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N ++  LC         LE+A  +  +M  +  + D  T+  +I  L  G + +EA
Sbjct: 321 VFTYNIVVNCLCKNGQ-----LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           L         G  P   TFN +I ALC  G    AL L   M      P   +Y+ LI  
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435

Query: 450 LDQLEK 455
           L  L K
Sbjct: 436 LCSLGK 441



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 5/152 (3%)

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
           FG + D  + N LL  L   S  +  LLE    V+ +M  +    D  T+  +++ L + 
Sbjct: 140 FGIQADTVVYNHLLNVLVEGS--KMKLLE---SVYSEMGARGIKPDVVTFNTLMKALCRA 194

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            +   A+I L      G  P   TF  ++Q    EG I+ AL +   M E     ++ + 
Sbjct: 195 HQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           ++LI    +L +  DA       +  G  P +
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 286


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 195/418 (46%), Gaps = 40/418 (9%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + ID+F  +       +V DF+ L  A+    + +  +    +    G+A N +T SIMI
Sbjct: 71  DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
            C+C       A   +  +   GY PN  TF+ L+N LC  GR+ EALE++D+M  +G K
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190

Query: 188 PNIQTYNCLLKGLCYVGRVEEAY-----------------------------------EM 212
           P++ T N L+ GLC  G+  EA                                    E+
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  ++   +K D   Y+ ++DG CK G  + A  L NE   +G+T N++T+N L  G+C 
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G    G  LL+ M KR   P+ +++S L++  +K GK+R A  + KEM+  G   D   
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             SL+ G C     +++ L+ A Q+ + M  K    +  T+ I+I    K  + D+ L  
Sbjct: 371 YTSLIDGFC-----KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                  G +  T+T+N +IQ  C  GK++ A  L   M      P+  +Y +L+  L
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 188/417 (45%), Gaps = 40/417 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E +++ D + + G    +   N L+  L +  ++  A+    +   YG  PN+ T+  
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C       A +++  M +     +   ++I+++ LCK G L  A  + ++M   G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293

Query: 186 CKPNIQTYNCLLKGLCYVGR-----------------------------------VEEAY 210
              NI TYN L+ G C  GR                                   + EA 
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E+   + + G+ PD  TYT+++DGFCK    ++A ++++  + +G  PN+ TFN L NGY
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK      G+ L + M  R  + D ++Y+TL+ G  + GK+  A  +F+EMV      + 
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                LL GLC     EK     A ++FEK+ K     D G Y I+I  +    K D+A 
Sbjct: 474 VTYKILLDGLCDNGESEK-----ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                    G  P   T+N +I  LC +G + +A LL   M E    P   +Y++LI
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 182/354 (51%), Gaps = 10/354 (2%)

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           +IK D   +S+     ++  L      + A   F+E    G+  N  T++I+I  +CN  
Sbjct: 258 NIKLDAVKYSI-----IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 312

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
            + +  K++  M     +PNV TF++L++S  K G+L+EA E+  +M   G  P+  TY 
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 372

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+ G C    +++A +M+  + + G  P++ T+  +++G+CK  R ++ +EL  +   R
Sbjct: 373 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 432

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           GV  + VT+NTL  G+C+ G       L + M  R   P+ ++Y  LL+GL   G+   A
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           + IF+++ +   E+D  + N ++ G+C  S      ++DA+ +F  +  K       TY 
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASK-----VDDAWDLFCSLPLKGVKPGVKTYN 547

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           I+I  L K     EA +      E GH P   T+N +I+A  G+G   K++ L+
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 163/324 (50%), Gaps = 7/324 (2%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G   N+ T +I++N  C+  +L  A   + ++ ++G +PN  T++ L+ GLC  GRV EA
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            E++  +   G KPD+ T   +++G C  G+  EAM L+++ +E G  PN VT+  + N 
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            CK G     + LL+ M++RN   D + YS +++GL K G +  A ++F EM   G   +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297

Query: 330 ERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
               N L+ G C    W+      D  ++   M K+    +  T+ ++I +  K  K  E
Sbjct: 298 IITYNILIGGFCNAGRWD------DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A       I  G  P TIT+ ++I   C E  +DKA  ++ LM      P+  ++++LI 
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411

Query: 449 KLDQLEKSYDACALYGAALKQGVI 472
              +  +  D   L+     +GV+
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVV 435



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 157/326 (48%), Gaps = 6/326 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L    ++F+ ++  G   ++  +N L+         +   K   +     + PN  
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS++I  +  +    EA ++   M   G  P+  T+T L++  CK   L +A +++D M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PNI+T+N L+ G C   R+++  E+   +   G+  D  TY  ++ GFC++G+ 
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           N A EL  E + R V PN+VT+  L +G C  G   K + + + ++K     D   Y+ +
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G+    K+  A  +F  +   G +   +  N ++ GLC     +K  L +A  +F KM
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC-----KKGPLSEAELLFRKM 569

Query: 362 TKKVSVTDPGTYGIVIRT-LGKGKKT 386
            +     D  TY I+IR  LG G  T
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDAT 595



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 1/285 (0%)

Query: 46  KENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA 104
           K NP  +     +D  +K   L+E  ++   +   G       +  L+      N  + A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387

Query: 105 VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
            +      S G  PN  TF+I+I  YC  N   +  ++   M   G   +  T+  L+  
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
            C+ G+L  A E+  +M      PNI TY  LL GLC  G  E+A E+   ++   ++ D
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           +  Y  ++ G C   + ++A +L      +GV P V T+N +  G CK+G   +   L +
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            M++    PD  +Y+ L+   L  G    +V + +E+ R GF VD
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 7/255 (2%)

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G+  ++YT + +++ FC+  +   A   + + I+ G  PN +TF+TL NG C EG   + 
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + L+  M +    PD I+ +TL+NGL   GK   A+ +  +MV +G + +      +L  
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           +C KS +       A ++  KM ++    D   Y I+I  L K    D A  +L + +EM
Sbjct: 238 MC-KSGQTAL----AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF-NLFNEMEM 291

Query: 400 -GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G     IT+N +I   C  G+ D    LL  M +    P+  ++ +LI    +  K  +
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351

Query: 459 ACALYGAALKQGVIP 473
           A  L+   + +G+ P
Sbjct: 352 AEELHKEMIHRGIAP 366



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 1/113 (0%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           AS + +  D+F S+   G    V  +N ++  L        A   F +    G AP+ WT
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           ++I+IR +    D  ++ K+I+ +   G+  + +T  ++++ L   GRLK++ 
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKSF 632


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 211/451 (46%), Gaps = 40/451 (8%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++ S +K    ++  +   G    V  FN L+ AL   ++  TAV    E SS G+AP+ 
Sbjct: 157 VEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDE 216

Query: 121 WTFS-----------------------------------IMIRCYCNKNDFFEARKVIDC 145
            TF+                                   ++I  YC      +A   I  
Sbjct: 217 TTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 276

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
              +G+ P+  T+   VN LC++  +  AL+V+D M + G  P++ TYN ++  LC  G+
Sbjct: 277 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +EEA  +L  + + G  PD+ T+  ++   C   R  EA++L  +   +GV+P+V TFN 
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L N  CK G P   + L + MK   C PD+++Y+TL++ L   GK+  A+ + K+M   G
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   N+++ GLC K       +E+A +VF++M  +    +  T+  +I  L K KK
Sbjct: 457 CPRSTITYNTIIDGLCKKMR-----IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+A   ++  I  G  P  IT+N+++   C +G I KA  +L  M  +       +Y  
Sbjct: 512 IDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           LI  L +  ++  A  +      +G+ P  K
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPK 602



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 193/394 (48%), Gaps = 5/394 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G + +    N L+     L   E A+ +  +  + G  P+  T++  +   C  +    A
Sbjct: 246 GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHA 305

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            KV+D M   G+ P+V T+ I+VN LCK+G+L+EA  +L+QM   GC P+I T+N L+  
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC   R+EEA ++   V   G+ PDVYT+  +++  CKVG  + A+ L  E    G TP+
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VT+NTL +  C  G   K + LLK M+   C    I+Y+T+++GL K  +I  A  +F 
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           +M   G   +    N+L+ GLC     +   ++DA+ +  +M  +    +  TY  ++  
Sbjct: 486 QMDLQGISRNAITFNTLIDGLC-----KDKKIDDAFGLINQMISEGLQPNNITYNSILTH 540

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
             K     +A   L      G     +T+  +I  LC  G+   AL +L  M      P+
Sbjct: 541 YCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPT 600

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y+ ++  L +     DA +L+    + G  P
Sbjct: 601 PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP 634



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 186/382 (48%), Gaps = 6/382 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + D + ++G +  V  +N ++  L    + E A    ++    G  P+  TF+ +I  
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C  N   EA  +   +   G  P+V TF IL+N+LCK G    AL + ++M   GC P+
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L+  LC +G++ +A ++L ++++ G      TY  ++DG CK  R  EA E+ +
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +   +G++ N +TFNTL +G CK+       GL+  M      P+ I+Y+++L    K G
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQG 545

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            I+ A  I + M   GFEVD     +L+ GLC     +      A +V   M  K     
Sbjct: 546 DIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV-----ALKVLRGMRIKGMRPT 600

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC-GEGKIDKALLLL 428
           P  Y  V+++L +     +AL       E+G  P  +T+  V + LC G G I +A   +
Sbjct: 601 PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFM 660

Query: 429 FLMYEHAKIPSRTSYDMLITKL 450
             M +   IP  +S+ ML   L
Sbjct: 661 LEMVDKGFIPEFSSFRMLAEGL 682



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 204/408 (50%), Gaps = 8/408 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   I + +   G    ++ FN L+ AL   N  E A+    + +  G++P+ +
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I+I   C   D   A ++ + M ++G  P+  T+  L+++LC  G+L +AL++L  M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +  TYN ++ GLC   R+EEA E+   +   G+  +  T+  ++DG CK  + 
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A  L+N+ I  G+ PN +T+N++   YCK+G   K   +L+ M       D ++Y TL
Sbjct: 513 DDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K G+ + A+ + + M   G     +  N +L+ L       ++ + DA  +F +M
Sbjct: 573 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF-----RRNNIRDALSLFREM 627

Query: 362 TKKVSVTDPGTYGIVIRTLGK-GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            +     D  TY IV R L + G    EA   +   ++ G IP   +F  + + L   G 
Sbjct: 628 AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 687

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
            D  +  + ++ E  K+  R S    I    ++ K YDA A +G  L+
Sbjct: 688 DDYFIRAIEIIME--KVDLRESDVSAIRGYLKIRKFYDALATFGRFLE 733



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G   +   +  L+N L +  ++K    V  +MG  G KP++ T+N L+K LC   +V  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             ML  + + G+ PD  T+T +M GF + G    A+ +    +E G +   VT N L NG
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YCK G     +G ++        PD+I+Y+T +NGL +   +  A+ +   MV+ G + D
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N ++  LC         LE+A  +  +M  +  + D  T+  +I  L  G + +EA
Sbjct: 321 VFTYNIVVNCLCKNGQ-----LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           L         G  P   TFN +I ALC  G    AL L   M      P   +Y+ LI  
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435

Query: 450 LDQLEK 455
           L  L K
Sbjct: 436 LCSLGK 441



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 5/152 (3%)

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
           FG + D  + N LL  L   S  +  LLE    V+ +M  +    D  T+  +++ L + 
Sbjct: 140 FGIQADTVVYNHLLNVLVEGS--KMKLLE---SVYSEMGARGIKPDVVTFNTLMKALCRA 194

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            +   A++ L      G  P   TF  ++Q    EG I+ AL +   M E     ++ + 
Sbjct: 195 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           ++LI    +L +  DA       +  G  P +
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 286



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 27/194 (13%)

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV------------- 322
           P++  G  +L+      PD  +   +LN  L      P   +++E++             
Sbjct: 35  PLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMK 94

Query: 323 -------RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ-VFEKMTKKVSV-TDPGTY 373
                  R G +V   +++S L      S+E + L +DA   +  ++     +  D   Y
Sbjct: 95  VLVAEMRREGHQVKLGVVHSFL-----DSYEGQQLFDDAVDLILNQLQPLFGIQADTVVY 149

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             ++  L +G K              G  P  +TFN +++ALC   ++  A+L+L  M  
Sbjct: 150 NHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS 209

Query: 434 HAKIPSRTSYDMLI 447
               P  T++  L+
Sbjct: 210 RGVAPDETTFTTLM 223


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 236/507 (46%), Gaps = 54/507 (10%)

Query: 1   MSSLVPSNSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDR 60
           M++L+ S SF+F +    N    P+ + L   AAA+ +  ES ++  NP S + +R + R
Sbjct: 1   MAALLQS-SFLFPHATFPN----PKPHHL---AAAAATRPESPNVAPNPASARLRRLIAR 52

Query: 61  -----------IKASPLKERIDIFDSIK----------------------KDGTNWSVSD 87
                      + AS   E  D++   K                        G+   V  
Sbjct: 53  EDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFA 112

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+         + A +      S  +AP+++T++ +IR  C++    +A  ++D M 
Sbjct: 113 YNTLVAGYCRYGHLDAARRLIG---SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDML 169

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PNV T+T+L+ ++CK+   ++A+ VLD+M   GC PNI TYN ++ G+C  GRV+
Sbjct: 170 RRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 229

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A ++L  + + G +PD  +YT ++ G C   R ++  EL  E +E+   PN VTF+ L 
Sbjct: 230 DARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 289

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             +C+ G   + + +L+ M +  C  +    + ++N + K G++  A      M  +G  
Sbjct: 290 RFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCN 349

Query: 328 VDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
            D     ++L+GLC  + W       DA ++ ++M +     +  T+   I  L +    
Sbjct: 350 PDTISYTTVLKGLCRAERW------NDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLI 403

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           ++A++ +    E G     +T+N ++   C +G ID AL L   M      P+  +Y  L
Sbjct: 404 EQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTL 460

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           +T L   E+   A  L    L +   P
Sbjct: 461 LTGLCNAERLDAAAELVAEMLHRDCPP 487



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 194/434 (44%), Gaps = 33/434 (7%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+ + +   G       +  LL  L      +   + F+E       PN  TF ++IR +
Sbjct: 233 DLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 292

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C       A +V+  M ++    N T   I++NS+CK GR+ +A + L+ MG  GC P+ 
Sbjct: 293 CRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDT 352

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  +LKGLC   R  +A E+L  +  +   P+  T+   +   C+ G   +A+ L+ +
Sbjct: 353 ISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ 412

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             E G T  VVT+N L NG+C +G        L+L +   C P+ I+Y+TLL GL    +
Sbjct: 413 MQEHGCTVGVVTYNALVNGFCVQGHIDSA---LELFRSMPCKPNTITYTTLLTGLCNAER 469

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW--EEKDLLE---------------- 352
           +  A  +  EM+      +    N L+   C K +  E  +L+E                
Sbjct: 470 LDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNT 529

Query: 353 ------------DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
                       DA ++   +  K    D  T+  +I  L K  + +EA+   H A ++G
Sbjct: 530 LFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIG 589

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
             P+ + +N ++  LC   +ID A+  L  M  +  +P+ ++Y +LI  L +     +A 
Sbjct: 590 MRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQ 649

Query: 461 ALYGAALKQGVIPQ 474
            L      +GV+ +
Sbjct: 650 DLLSMLCSRGVVSK 663



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 132/260 (50%), Gaps = 3/260 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ I + + +++ G    V  +N L+    +    ++A++ F    S    PN+ T++ 
Sbjct: 403 IEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFR---SMPCKPNTITYTT 459

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   CN      A +++  M      PNV TF +LVN  C+ G L EA+E+++QM   G
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHG 519

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN+ TYN L  G+      E+A E+L  + + G+ PDV T+++++    K  R  EA+
Sbjct: 520 CTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAI 579

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ + A + G+ P  + +N +  G CK       +  L  M    C+P++ +Y  L+ GL
Sbjct: 580 QMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGL 639

Query: 306 LKWGKIRPAVSIFKEMVRFG 325
            + G ++ A  +   +   G
Sbjct: 640 AREGLLKEAQDLLSMLCSRG 659


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 226/486 (46%), Gaps = 76/486 (15%)

Query: 62  KASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K S   + +DIF  + +  G    +  +N LL AL+  N+ + A  FF    + GL+PN 
Sbjct: 90  KNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNL 149

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++I+I+  C K  F +A+++++ M++ G+ P+V ++  L+NSL K+G + +AL++ D+
Sbjct: 150 QTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 209

Query: 181 MGRIGCK------------------------------------PNIQTYNCLLKGLCYVG 204
           M   G                                      PNI +YN ++ GLC  G
Sbjct: 210 MPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCG 269

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           + +E++E+   +K +    D+YTY+ ++ G C  G  + A  +  E  E GV+P+VV +N
Sbjct: 270 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 329

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKK----------------------------------RN 290
           T+ NGY + G   + + L K+M+K                                  ++
Sbjct: 330 TMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKD 389

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C  D ++Y  L++GL K G +  A+SI +E      ++D    +S++ GLC      +  
Sbjct: 390 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC-----REGR 444

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           L++   V ++MTK     +P     VI    +  K ++AL    + +  G  P  +T+N 
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I  L    +  +A  L+  M      P+  +Y +L+  L Q +K   A  L+  AL++G
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 564

Query: 471 VIPQRK 476
             P  K
Sbjct: 565 FKPDVK 570



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 185/389 (47%), Gaps = 11/389 (2%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           D + AS + ER+     +K      ++  +N ++  L    + + + + +          
Sbjct: 234 DILNASEIWERL-----LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 288

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           + +T+S +I   C   +   A +V   M +NG  P+V  +  ++N   ++GR++E LE+ 
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 348

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
             M + GC+  + +YN L++GL    +V+EA  +   +       D  TY  ++ G CK 
Sbjct: 349 KVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 407

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G  N+A+ +L EA       +   ++++ NG C+EG   +  G+L  M K  C P+    
Sbjct: 408 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC 467

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + ++NG ++  K+  A+  F  MV  G        N+L+ GL      + +   +AY + 
Sbjct: 468 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL-----SKAERFSEAYALV 522

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           ++M  K    +  TY +++  L +GKK D AL     A+E G  P     N +I  LC  
Sbjct: 523 KEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSS 582

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           GK++ AL L   M +   +P+  +++ L+
Sbjct: 583 GKVEDALQLYSEMKQRKCVPNLVTHNTLM 611



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 113/220 (51%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+    EA +     +++ +S MI   C +    E   V+D M  +G  PN      ++N
Sbjct: 413 ALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVIN 472

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
              ++ +L++AL     M   GC P + TYN L+ GL    R  EAY ++  + + G KP
Sbjct: 473 GFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKP 532

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           ++ TY+ +M+G C+  + + A+ L  +A+E+G  P+V   N + +G C  G     + L 
Sbjct: 533 NMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLY 592

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             MK+R C+P+ ++++TL+ G  K      A  I+  +++
Sbjct: 593 SEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 89/185 (48%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ ++  L      +       + + +G  PN    + +I  +   +   +A +    M 
Sbjct: 432 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMV 491

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P V T+  L+N L K+ R  EA  ++ +M   G KPN+ TY+ L+ GLC   +++
Sbjct: 492 SKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLD 551

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A  +       G KPDV  +  ++ G C  G+  +A++L +E  +R   PN+VT NTL 
Sbjct: 552 MALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLM 611

Query: 268 NGYCK 272
            G+ K
Sbjct: 612 EGFYK 616



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 98/194 (50%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   + D + K G   +    N ++   V  ++ E A++FF    S G  P   T++ 
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I        F EA  ++  M   G+ PN+ T+++L+N LC+  +L  AL +  Q    G
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 564

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KP+++ +N ++ GLC  G+VE+A ++   +K     P++ T+  +M+GF KV     A 
Sbjct: 565 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERAS 624

Query: 246 ELLNEAIERGVTPN 259
           ++ +  ++   + N
Sbjct: 625 KIWDHILQSWSSSN 638



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 72/149 (48%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++AS L++ +  F ++   G   +V  +N L+  L        A     E    G  PN 
Sbjct: 475 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNM 534

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+S+++   C       A  +     + G+ P+V    I+++ LC SG++++AL++  +
Sbjct: 535 ITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSE 594

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           M +  C PN+ T+N L++G   V   E A
Sbjct: 595 MKQRKCVPNLVTHNTLMEGFYKVRDFERA 623


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 211/451 (46%), Gaps = 40/451 (8%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++ S +K    ++  +   G    V  FN L+ AL   ++  TAV    E SS G+AP+ 
Sbjct: 65  VEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDE 124

Query: 121 WTFS-----------------------------------IMIRCYCNKNDFFEARKVIDC 145
            TF+                                   ++I  YC      +A   I  
Sbjct: 125 TTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 184

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
              +G+ P+  T+   VN LC++  +  AL+V+D M + G  P++ TYN ++  LC  G+
Sbjct: 185 EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 244

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +EEA  +L  + + G  PD+ T+  ++   C   R  EA++L  +   +GV+P+V TFN 
Sbjct: 245 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 304

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L N  CK G P   + L + MK   C PD+++Y+TL++ L   GK+  A+ + K+M   G
Sbjct: 305 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 364

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   N+++ GLC K       +E+A +VF++M  +    +  T+  +I  L K KK
Sbjct: 365 CPRSTITYNTIIDGLCKKMR-----IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 419

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+A   ++  I  G  P  IT+N+++   C +G I KA  +L  M  +       +Y  
Sbjct: 420 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 479

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           LI  L +  ++  A  +      +G+ P  K
Sbjct: 480 LINGLCKAGRTQVALKVLRGMRIKGMRPTPK 510



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 194/394 (49%), Gaps = 5/394 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G + +    N L+     L   E A+ +  +  + G  P+  T++  +   C  +    A
Sbjct: 154 GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHA 213

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            KV+D M   G+ P+V T+ I+VN LCK+G+L+EA  +L+QM   GC P+I T+N L+  
Sbjct: 214 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 273

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC   R+EEA ++   V   G+ PDVYT+  +++  CKVG  + A+ L  E    G TP+
Sbjct: 274 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 333

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VT+NTL +  C  G   K + LLK M+   C    I+Y+T+++GL K  +I  A  +F 
Sbjct: 334 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 393

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           +M   G   +    N+L+ GLC     +   ++DA+++  +M  +    +  TY  ++  
Sbjct: 394 QMDLQGISRNAITFNTLIDGLC-----KDKKIDDAFELINQMISEGLQPNNITYNSILTH 448

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
             K     +A   L      G     +T+  +I  LC  G+   AL +L  M      P+
Sbjct: 449 YCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPT 508

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y+ ++  L +     DA +L+    + G  P
Sbjct: 509 PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP 542



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 205/408 (50%), Gaps = 8/408 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   I + +   G    ++ FN L+ AL   N  E A+    + +  G++P+ +
Sbjct: 241 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 300

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I+I   C   D   A ++ + M ++G  P+  T+  L+++LC  G+L +AL++L  M
Sbjct: 301 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 360

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +  TYN ++ GLC   R+EEA E+   +   G+  +  T+  ++DG CK  + 
Sbjct: 361 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 420

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A EL+N+ I  G+ PN +T+N++   YCK+G   K   +L+ M       D ++Y TL
Sbjct: 421 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 480

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K G+ + A+ + + M   G     +  N +L     +S   ++ + DA  +F +M
Sbjct: 481 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL-----QSLFRRNNIRDALSLFREM 535

Query: 362 TKKVSVTDPGTYGIVIRTLGK-GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            +     D  TY IV R L + G    EA   +   ++ G IP   +F  + + L   G 
Sbjct: 536 AEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGM 595

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
            D  +  + ++ E  K+  R S    I    ++ K YDA A +G  L+
Sbjct: 596 DDYFIRAIEIIME--KVDLRESDVSAIRGYLKIRKFYDALATFGRFLE 641



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 185/382 (48%), Gaps = 6/382 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + D + ++G +  V  +N ++  L    + E A    ++    G  P+  TF+ +I  
Sbjct: 214 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 273

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C  N   EA  +   +   G  P+V TF IL+N+LCK G    AL + ++M   GC P+
Sbjct: 274 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 333

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L+  LC +G++ +A ++L ++++ G      TY  ++DG CK  R  EA E+ +
Sbjct: 334 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 393

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +   +G++ N +TFNTL +G CK+        L+  M      P+ I+Y+++L    K G
Sbjct: 394 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG 453

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            I+ A  I + M   GFEVD     +L+ GLC     +      A +V   M  K     
Sbjct: 454 DIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV-----ALKVLRGMRIKGMRPT 508

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC-GEGKIDKALLLL 428
           P  Y  V+++L +     +AL       E+G  P  +T+  V + LC G G I +A   +
Sbjct: 509 PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFM 568

Query: 429 FLMYEHAKIPSRTSYDMLITKL 450
             M +   IP  +S+ ML   L
Sbjct: 569 LEMVDKGFIPEFSSFRMLAEGL 590



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G   +   +  L+N L +  ++K    V  +MG  G KP++ T+N L+K LC   +V  A
Sbjct: 49  GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             ML  + + G+ PD  T+T +M GF + G    A+ +    +E G +   VT N L NG
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YCK G     +G ++        PD+I+Y+T +NGL +   +  A+ +   MV+ G + D
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N ++  LC         LE+A  +  +M  +  + D  T+  +I  L  G + +EA
Sbjct: 229 VFTYNIVVNCLCKNGQ-----LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 283

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           L         G  P   TFN +I ALC  G    AL L   M      P   +Y+ LI  
Sbjct: 284 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 343

Query: 450 LDQLEK 455
           L  L K
Sbjct: 344 LCSLGK 349



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 5/152 (3%)

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
           FG + D  + N LL  L   S  +  LLE    V+ +M  +    D  T+  +++ L + 
Sbjct: 48  FGIQADTVVYNHLLNVLVEGS--KMKLLE---SVYSEMGARGIKPDVVTFNTLMKALCRA 102

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            +   A++ L      G  P   TF  ++Q    EG I+ AL +   M E     ++ + 
Sbjct: 103 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 162

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           ++LI    +L +  DA       +  G  P +
Sbjct: 163 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 194


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 202/389 (51%), Gaps = 8/389 (2%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N ++    +  + + A +  +   +  + P+++T++ +IR  C +     A  V+D
Sbjct: 120 VMSYNAMVAGYCVTGQLDNARRLVA---AMPMEPDTYTYNTLIRGLCGRGRTDNALAVLD 176

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G  P+V T+TIL+ + CK    K+A+++LD+M   GC P+I TYN ++ G+C  G
Sbjct: 177 DMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEG 236

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           RV++A E L ++ + G +P+  +Y  V+ G C   R  +A +L+ E   +G  PNVVTFN
Sbjct: 237 RVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFN 296

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +  C+ G     + +L  + K  C P+ +SY+ +L+   K  K+  A++  + MV  
Sbjct: 297 MLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSS 356

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D    N+LL  LC +  E    +E  +Q+ +K    V +    +Y  VI  L K  
Sbjct: 357 GCYPDIVSYNTLLTALC-RGGEVDAAVELLHQLKDKGCTPVLI----SYNTVIDGLTKAG 411

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           KT+EAL  L+  +  G  P  IT++ +   LC EG+I++A+     + +    P+   Y+
Sbjct: 412 KTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYN 471

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++  L +   ++ A  L+   +  G +P
Sbjct: 472 AILLGLCKRRATHSAIDLFTYMVSNGCMP 500



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 187/363 (51%), Gaps = 5/363 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L      + A+    +    G  P+  T++I++   C ++ + +A K++D M 
Sbjct: 155 YNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  P++ T+ ++VN +C+ GR+ +A+E L  +   GC+PN  +YN +LKGLC   R E
Sbjct: 215 DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWE 274

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A +++  +   G  P+V T+  ++   C+ G    AME+L++  + G TPN +++N + 
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           + +CK+    + +  ++LM    C PD +SY+TLL  L + G++  AV +  ++   G  
Sbjct: 335 HAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 394

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N+++ GL      +    E+A ++  +M  K    D  TY  +   L +  + +
Sbjct: 395 PVLISYNTVIDGL-----TKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIE 449

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA+       +MG  P T+ +N ++  LC       A+ L   M  +  +P+ ++Y +LI
Sbjct: 450 EAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILI 509

Query: 448 TKL 450
             L
Sbjct: 510 EGL 512



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 181/356 (50%), Gaps = 5/356 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S  K+ + + D ++  G    +  +N ++  +      + A++F     SYG  PN+ 
Sbjct: 199 KRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTV 258

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I+++  C    + +A K++  M   G  PNV TF +L++ LC+ G ++ A+E+LDQ+
Sbjct: 259 SYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQI 318

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC PN  +YN +L   C   +++ A   +  + + G  PD+ +Y  ++   C+ G  
Sbjct: 319 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEV 378

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ELL++  ++G TP ++++NT+ +G  K G   + + LL  M  +   PD I+YST+
Sbjct: 379 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTI 438

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            +GL + G+I  A+  F ++   G   +  + N++L GLC     ++     A  +F  M
Sbjct: 439 SSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLC-----KRRATHSAIDLFTYM 493

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
                + +  TY I+I  L       EA   +      G + +T+     I+ L G
Sbjct: 494 VSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIRLLDG 549



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 191/399 (47%), Gaps = 46/399 (11%)

Query: 111 ASSYGLAPN-----SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT-TFTILVNS 164
           A +  +APN     S   +  +R    + D  EA ++++ M   G  P+       L+  
Sbjct: 42  AYAGAVAPNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKK 99

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           LC SGR  EA  VL       C+P++ +YN ++ G C  G+++ A  ++  +    ++PD
Sbjct: 100 LCASGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPD 151

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
            YTY  ++ G C  GR++ A+ +L++ + RG  P+VVT+  L    CK     + V LL 
Sbjct: 152 TYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLD 211

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MK 343
            M+ + C PD ++Y+ ++NG+ + G++  A+   K +  +G E +    N +L+GLC  +
Sbjct: 212 EMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAE 271

Query: 344 SWEE-----------------------------KDLLEDAYQVFEKMTKKVSVTDPGTYG 374
            WE+                             + L+E A ++ +++ K     +  +Y 
Sbjct: 272 RWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYN 331

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            ++    K KK D A+  +   +  G  P  +++N ++ ALC  G++D A+ LL  + + 
Sbjct: 332 PILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 391

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              P   SY+ +I  L +  K+ +A  L    + +G+ P
Sbjct: 392 GCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQP 430


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 206/385 (53%), Gaps = 6/385 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           +S L  R  + DSIK  G   + + FN L+    + ++ + A+ + ++ S +G  P++ +
Sbjct: 192 SSILLARQVLKDSIKL-GVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVS 250

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ ++     +    EAR ++  M   G  PN  T+ +LV   C+ G LKEA +V++ M 
Sbjct: 251 YNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMT 310

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           R    P + TYN L+ G C  G+++EA+ +   ++   + PDV TY  ++DG  +   S+
Sbjct: 311 RNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSS 370

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           E   L+ E  ++GV  N VT+N +    CK+G   +    L  M++    PD ++Y+TL+
Sbjct: 371 EVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLI 430

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
               K GK+  A  +  EM   G ++D   +N++L  LC+   E+K  L++AY +    +
Sbjct: 431 GAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCV---EKK--LDEAYNLLCSAS 485

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           K+  + D  +YGI+I    K +K D AL       E   +P TIT+N+VI  LC   K+D
Sbjct: 486 KRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVD 545

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLI 447
           +A+  L  M E+  +P  T+Y+++I
Sbjct: 546 QAIDKLNEMLENGLVPDETTYNIII 570



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 203/460 (44%), Gaps = 41/460 (8%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D + K   L+E  D+   +K  G + +   +N L+     L   + A K 
Sbjct: 246 PDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKV 305

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS--- 164
               +   L P  WT+++++  +CN     EA ++ D M      P+V T+  L++    
Sbjct: 306 IEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQ 365

Query: 165 --------------------------------LCKSGRLKEALEVLDQMGRIGCKPNIQT 192
                                           +CK G + EA   LD+M   G  P+  T
Sbjct: 366 WRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVT 425

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN L+   C  G++ +A+ M+  + + GLK D +T   ++   C   + +EA  LL  A 
Sbjct: 426 YNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSAS 485

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           +RG   + V++  L  GY K+    + + L   MK+R  +P  I+Y++++ GL +  K+ 
Sbjct: 486 KRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVD 545

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A+    EM+  G   DE   N ++ G C++   EK     A+Q   +M + +   D  T
Sbjct: 546 QAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEK-----AFQFHNEMIENLFKPDVYT 600

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
             I++R L +    ++AL   +  +  G     +T+N +I +LC EGK + A  LL  M 
Sbjct: 601 CNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEME 660

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
                P + +Y ++I  L    +  +A       ++ G++
Sbjct: 661 AKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIV 700



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 188/430 (43%), Gaps = 43/430 (10%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           ++  SD   LL++ +  + Q    K     +     P+       I  Y   +    A +
Sbjct: 102 HYMFSDAKSLLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQ 161

Query: 142 VIDCMFDNGYHPNVTTFTILVNSL------------------------------------ 165
           + + M    Y PN+ T   L+NSL                                    
Sbjct: 162 IFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIY 221

Query: 166 --CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             C   ++K+AL+ +++M   GC P+  +YN +L  L     ++EA ++L+++K+ GL P
Sbjct: 222 GYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSP 281

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           + +TY  ++ G+C++G   EA +++       + P V T+N L NG+C +G   +   + 
Sbjct: 282 NKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIR 341

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M+K N LPD ++Y+TL++G  +W       S+ +EM + G + +    N +L+ +C  
Sbjct: 342 DEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMC-- 399

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +K  + +A    +KM +     D  TY  +I    K  K  +A   +      G   
Sbjct: 400 ---KKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKI 456

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            T T N ++  LC E K+D+A  LL    +   I    SY +LI    + EK   A  L+
Sbjct: 457 DTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLW 516

Query: 464 GAALKQGVIP 473
               ++ ++P
Sbjct: 517 DEMKERQIMP 526



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 172/395 (43%), Gaps = 17/395 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E     D ++++G +     +N L+ A     +   A +   E +S GL  ++W
Sbjct: 400 KKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTW 459

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T + ++ C C +    EA  ++      GY  +  ++ IL+    K  +   AL + D+M
Sbjct: 460 TLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEM 519

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P+  TYN ++ GLC   +V++A + L  +  +GL PD  TY  ++ GFC  G  
Sbjct: 520 KERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNV 579

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A +  NE IE    P+V T N L  G C+EG   K + L   +  +    D ++Y+T+
Sbjct: 580 EKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTI 639

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K GK   A  +  EM       D+     ++  L            DA ++ E  
Sbjct: 640 ISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALT-----------DAGRIKEAE 688

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
              + + + G        LGKG+    + +  H         ++I +++ I  LC + K 
Sbjct: 689 EFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDF------KSIAYSDQINELCNQHKY 742

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
             A+ L   + +     ++ +Y  L+  L +  KS
Sbjct: 743 KDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKS 777


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 202/411 (49%), Gaps = 5/411 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +   +   G    +  +N +L  L M        +   E      APN  TF+ 
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C    F    +V+  M ++G  P++  +  +++ +CK G L+ A E+L++M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KPN+  YN +LKGLC   R +EA E+L  +       D  T+  ++D FC+ G  +  +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL + +  G  P+V+T+ T+ NG+CKEG   + V LLK M    C P+ +SY+ +L GL
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+   A  +  +M++ G   +    N+L+  LC     +K L+E A ++ ++M    
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC-----KKGLVEQAIELLKQMLVNG 491

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  +Y  VI  LGK  KT+EAL  L+  +  G  P TI ++++  AL  EG+++K +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            +   + +         Y+ +I+ L +  ++  A   +   +  G +P   
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 189/364 (51%), Gaps = 6/364 (1%)

Query: 66  LKERI-DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           L ER+ ++   + + G    +  +  ++  +      E A +  +   SYGL PN   ++
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +++  C+   + EA +++  MF      +  TF ILV+  C++G +   +E+L+QM   
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           GC P++ TY  ++ G C  G ++EA  +L ++ + G KP+  +YT V+ G C  GR  +A
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            EL+++ I++G  PN VTFNTL N  CK+G   + + LLK M    C PD ISYST+++G
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K GK   A+ +   MV  G   +  + +S+    C  S E +  +    Q+F+ +   
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSI---ACALSREGR--VNKVIQMFDNIKDT 560

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              +D   Y  VI +L K  +TD A+    + +  G +P   T+  +I+ L  EG   +A
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA 620

Query: 425 LLLL 428
             LL
Sbjct: 621 QELL 624



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 177/359 (49%), Gaps = 7/359 (1%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           + PN++TF  ++R  C +    +A +V+D M   G  P    + +++ + C+SG  + ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            VL+ M   GC  +    N +L  +C  G V+EA  +L  +   G + D+ +Y AV+ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           C   R  +  EL++E +     PN+VTFNTL    C+ G   +   +L  M +  C PD 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDA 354
             Y+T+++G+ K G +  A  I   M  +G + +    N++L+GLC  + W+E      A
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE------A 340

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++  +M +K    D  T+ I++    +    D  +  L   +  G +P  IT+  VI  
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            C EG ID+A++LL  M      P+  SY +++  L    +  DA  L    ++QG  P
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPP 459



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 186/405 (45%), Gaps = 40/405 (9%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++   E S  G AP    + +++   C    F  + +V++ M   G   +     +++N
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLN 189

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV---GRVEE------------ 208
           ++C+ G + EA+ +L ++   GC+ +I +YN +LKGLC     G VEE            
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 209 --------------------AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
                                +E+L  +   G  PD+  Y  ++DG CK G    A E+L
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           N     G+ PNVV +NT+  G C      +   LL  M +++C  D ++++ L++   + 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G +   + + ++M+  G   D     +++ G C     ++ L+++A  + + M+      
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFC-----KEGLIDEAVMLLKSMSSCGCKP 424

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +  +Y IV++ L    +  +A   +   I+ G  P  +TFN +I  LC +G +++A+ LL
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M  +   P   SY  +I  L +  K+ +A  L    + +G+ P
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 164/347 (47%), Gaps = 9/347 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I + +   G   +V  +N +L  L      + A +  SE        +  TF+I++  +
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C         ++++ M  +G  P+V T+T ++N  CK G + EA+ +L  M   GCKPN 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  +LKGLC  GR  +A E++  +   G  P+  T+  +++  CK G   +A+ELL +
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G +P++++++T+ +G  K G   + + LL +M  +   P+ I YS++   L + G+
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +   + +F  +       D  + N+++  LC K WE     + A   F  M     + + 
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVLYNAVISSLC-KRWET----DRAIDFFAYMVSNGCMPNE 601

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMG----HIPRTITFNNVIQ 413
            TY ++I+ L       EA   L      G    H+ R    +N  Q
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGISNCTQ 648



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 13/300 (4%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+ SLC +GR  EA   L   G       +  YN ++ G C  G++  A  +   V    
Sbjct: 53  LIRSLCSAGRTAEAARALADAGD---AAGVVAYNAMVAGYCRAGQLAAARRLAAAVP--- 106

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + P+ YT+  V+ G C  GR  +A+E+L+E   +G  P    ++ +    C+ G     V
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +L+ M  + C  D  + + +LN + + G +  AV + +++  FG E D    N++L+GL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 341 CM-KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           CM K W       D  ++ ++M +     +  T+  +I  L +    +     L    E 
Sbjct: 227 CMAKRW------GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P    +  +I  +C EG ++ A  +L  M  +   P+   Y+ ++  L   E+  +A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 105/231 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +  S+   G   +   +  +L  L        A +  S+    G  PN  
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C K    +A +++  M  NG  P++ +++ +++ L K+G+ +EALE+L+ M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN   Y+ +   L   GRV +  +M  N+K+  ++ D   Y AV+   CK   +
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           + A++     +  G  PN  T+  L  G   EG   +   LL  +  R  L
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 200/403 (49%), Gaps = 13/403 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +  + +  G+   V  +N L+         + A +      S  +AP+++T++ +IR  C
Sbjct: 98  VLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIG---SMPVAPDAYTYTPLIRVLC 154

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           ++    +A  ++D M   G  PNV T+T+L+ ++C++   ++A+ VLD+M   GC PNI 
Sbjct: 155 DRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIV 214

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN ++ G+C  GRV++A E+L  + + G +PD  +YT ++ G C   R ++  EL  E 
Sbjct: 215 TYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEM 274

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +E+   PN VTF+ L   +C+ G   + + +L+ M +  C  +    + ++N + K G++
Sbjct: 275 MEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRV 334

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
             A  +  +M  +G   D     ++L+GLC  + W      +DA ++  +M +     + 
Sbjct: 335 DDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERW------DDAKELLNEMVRNNCPPNE 388

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            T+   I  L +    ++A++ +    E G     +T+N ++   C +G ID AL L   
Sbjct: 389 VTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS 448

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M      P+  +Y  L+T L   E+   A  L    L+    P
Sbjct: 449 M---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPP 488



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 213/439 (48%), Gaps = 27/439 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           + S  ++ + + D ++  G   ++  +N ++  +      + A +  +   SYG  P++ 
Sbjct: 190 RNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTV 249

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +++  C    + +  ++   M +    PN  TF +L+   C+ G ++ A++VL+QM
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQM 309

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  N    N ++  +C  GRV++A+++L ++ + G  PD  +YT V+ G C+  R 
Sbjct: 310 TEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERW 369

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A ELLNE +     PN VTFNT     C++G   + + L++ M +  C    ++Y+ L
Sbjct: 370 DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNAL 429

Query: 302 LNGLLKWGKIRPAVSIFKEM-----------VRFGFEVDERM------MNSLLRGLC--- 341
           +NG    G I  A+ +F+ M           +  G    ER+      +  +LRG C   
Sbjct: 430 VNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPN 489

Query: 342 -------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
                  +  + +K  LE+A ++ E+M +     +  TY  ++  + K   +++AL  LH
Sbjct: 490 VVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLH 549

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
             +  G  P  ITF+++I  L  E +I++A+ L  ++ +    P    Y+ ++  L +  
Sbjct: 550 GLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRC 609

Query: 455 KSYDACALYGAALKQGVIP 473
           +  +A   +   +  G +P
Sbjct: 610 EIDNAIDFFAYMVSNGCMP 628



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 187/410 (45%), Gaps = 33/410 (8%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++ + +   G       +  LL  L      +   + F+E       PN  TF ++IR +
Sbjct: 234 ELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 293

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C       A +V++ M ++G   N T   I++NS+CK GR+ +A ++L+ MG  GC P+ 
Sbjct: 294 CRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDT 353

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  +LKGLC   R ++A E+L  +  +   P+  T+   +   C+ G   +A+ L+ +
Sbjct: 354 ISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ 413

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             E G T  VVT+N L NG+C +G        L+L +   C P+ I+Y+TLL GL    +
Sbjct: 414 MSEHGCTVGVVTYNALVNGFCVQGHIDSA---LELFRSMPCKPNTITYTTLLTGLCNAER 470

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-------------------- 350
           +  A  +  EM+R     +    N L+   C K + E+ +                    
Sbjct: 471 LDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNT 530

Query: 351 ----------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
                      EDA ++   +  K    D  T+  +I  L K  + +EA+   H   ++G
Sbjct: 531 LLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIG 590

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             P+ + +N ++  LC   +ID A+     M  +  +P+ ++Y +LI  L
Sbjct: 591 MRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGL 640



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 197/408 (48%), Gaps = 8/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + + D + + G   +V  +  LL A+   +  E A+    E  + G  PN  T+++
Sbjct: 159 VADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNV 218

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C +    +AR++++ +   G+ P+  ++T L+  LC S R  +  E+  +M    
Sbjct: 219 IINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN 278

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN  T++ L++  C  G VE A ++L  +   G   +      V++  CK GR ++A 
Sbjct: 279 CMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAF 338

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +LLN+    G  P+ +++ T+  G C+         LL  M + NC P++++++T +  L
Sbjct: 339 KLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICIL 398

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G I  A+ + ++M   G  V     N+L+ G C++       ++ A ++F  M  K 
Sbjct: 399 CQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH-----IDSALELFRSMPCKP 453

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           +     TY  ++  L   ++ D A   +   +     P  +TFN ++   C +G +++A+
Sbjct: 454 NTI---TYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAI 510

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L+  M EH   P+  +Y+ L+  + +   S DA  L    + +GV P
Sbjct: 511 ELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSP 558



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 174/362 (48%), Gaps = 9/362 (2%)

Query: 92  LMALVMLNEQETAVKFFSEASSY-GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L  L+   +   AV+    + S  G AP+ +  + +IR  C +    +A +V+     +G
Sbjct: 47  LRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG 106

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +V  +  LV   C+ G L  A  ++   G +   P+  TY  L++ LC  GRV +A 
Sbjct: 107 SPVDVFAYNTLVAGYCRYGHLDAARRLI---GSMPVAPDAYTYTPLIRVLCDRGRVADAL 163

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L ++   G +P+V TYT +++  C+     +AM +L+E   +G TPN+VT+N + NG 
Sbjct: 164 SLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 223

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+EG       LL  +      PD +SY+TLL GL    +      +F EM+      +E
Sbjct: 224 CREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNE 283

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              + L+R  C        ++E A QV E+MT+    T+     IVI ++ K  + D+A 
Sbjct: 284 VTFDMLIRFFC-----RGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAF 338

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             L+     G  P TI++  V++ LC   + D A  LL  M  +   P+  +++  I  L
Sbjct: 339 KLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICIL 398

Query: 451 DQ 452
            Q
Sbjct: 399 CQ 400



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 8/328 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +   + + +   G N     +  +L  L      + A +  +E       PN  
Sbjct: 330 KQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEV 389

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+  I   C K    +A  +I+ M ++G    V T+  LVN  C  G +  ALE+   M
Sbjct: 390 TFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM 449

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               CKPN  TY  LL GLC   R++ A E++  +      P+V T+  ++  FC+ G  
Sbjct: 450 ---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFL 506

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA+EL+ + +E G TPN++T+NTL +G  K+ +    + LL  +  +   PD I++S++
Sbjct: 507 EEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSI 566

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  L K  +I  AV +F  +   G      + N +L GLC +       +++A   F  M
Sbjct: 567 IGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCE-----IDNAIDFFAYM 621

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                + +  TY I+I  L       EA
Sbjct: 622 VSNGCMPNESTYIILIEGLAHEGLLKEA 649



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 130/260 (50%), Gaps = 3/260 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ I + + + + G    V  +N L+    +    ++A++ F    S    PN+ T++ 
Sbjct: 404 IEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFR---SMPCKPNTITYTT 460

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   CN      A +++  M      PNV TF +LV+  C+ G L+EA+E+++QM   G
Sbjct: 461 LLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHG 520

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN+ TYN LL G+      E+A E+L  + + G+ PDV T+++++    K  R  EA+
Sbjct: 521 CTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAV 580

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L +   + G+ P  V +N +  G CK       +     M    C+P++ +Y  L+ GL
Sbjct: 581 QLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGL 640

Query: 306 LKWGKIRPAVSIFKEMVRFG 325
              G ++ A  +   +   G
Sbjct: 641 AHEGLLKEAQDLLSVLCSRG 660



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 131/266 (49%), Gaps = 5/266 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN  +  L      E A+    + S +G      T++ ++  +C +     A ++   M 
Sbjct: 391 FNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM- 449

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                PN  T+T L+  LC + RL  A E++ +M R  C PN+ T+N L+   C  G +E
Sbjct: 450 --PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLE 507

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA E++  +   G  P++ TY  ++DG  K   S +A+ELL+  + +GV+P+V+TF+++ 
Sbjct: 508 EAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 567

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
               KE    + V L  +++     P  + Y+ +L GL K  +I  A+  F  MV  G  
Sbjct: 568 GILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCM 627

Query: 328 VDERMMNSLLRGLCMKSW--EEKDLL 351
            +E     L+ GL  +    E +DLL
Sbjct: 628 PNESTYIILIEGLAHEGLLKEAQDLL 653



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 99/205 (48%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  LL  L      + A +  +E       PN  TF++++  +C K    EA ++++ M 
Sbjct: 458 YTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMM 517

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           ++G  PN+ T+  L++ + K    ++ALE+L  +   G  P++ T++ ++  L    R+E
Sbjct: 518 EHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIE 577

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA ++   V++ G++P    Y  ++ G CK    + A++     +  G  PN  T+  L 
Sbjct: 578 EAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILI 637

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCL 292
            G   EG   +   LL ++  R  L
Sbjct: 638 EGLAHEGLLKEAQDLLSVLCSRGVL 662



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 8/167 (4%)

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD    + L+  L + G+   A  + +     G  VD    N+L+ G C         L+
Sbjct: 74  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGH-----LD 128

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A ++   M       D  TY  +IR L    +  +AL  L   +  G  P  +T+  ++
Sbjct: 129 AARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 185

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           +A+C     ++A+ +L  M      P+  +Y+++I  + +  +  DA
Sbjct: 186 EAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 232


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 226/486 (46%), Gaps = 76/486 (15%)

Query: 62  KASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K S   + +DIF  + +  G    +  +N LL AL+  N+ + A  FF    + GL+PN 
Sbjct: 90  KNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNL 149

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++I+I+  C K  F +A+++++ M++ G+ P+V ++  L+NSL K+G + +AL++ D+
Sbjct: 150 QTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 209

Query: 181 MGRIGCK------------------------------------PNIQTYNCLLKGLCYVG 204
           M   G                                      PNI +YN ++ GLC  G
Sbjct: 210 MPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCG 269

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           + +E++E+   +K +    D+YTY+ ++ G C  G  + A  +  E  E GV+P+VV +N
Sbjct: 270 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 329

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKK----------------------------------RN 290
           T+ NGY + G   + + L K+M+K                                  ++
Sbjct: 330 TMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKD 389

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C  D ++Y  L++GL K G +  A+SI +E      ++D    +S++ GLC      +  
Sbjct: 390 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC-----REGR 444

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           L++   V ++MTK     +P     VI    +  K ++AL    + +  G  P  +T+N 
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I  L    +  +A  L+  M      P+  +Y +L+  L Q +K   A  L+  AL++G
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 564

Query: 471 VIPQRK 476
             P  K
Sbjct: 565 FKPDVK 570



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 180/361 (49%), Gaps = 6/361 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++A  ++E ++++  ++K+G   +V  +N L+  L    + + A+  +          +S
Sbjct: 336 LRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADS 394

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+ +++   C      +A  +++   +     +   ++ ++N LC+ GRL E   VLDQ
Sbjct: 395 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQ 454

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + GCKPN    N ++ G     ++E+A     N+ + G  P V TY  +++G  K  R
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 514

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA  L+ E + +G  PN++T++ L NG C+       + L     ++   PD   ++ 
Sbjct: 515 FSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNI 574

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++GL   GK+  A+ ++ EM +     +    N+L+ G     ++ +D  E A ++++ 
Sbjct: 575 IIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF----YKVRDF-ERASKIWDH 629

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           + +     D  +Y I ++ L    +  +A+  L+ A++ G +P  IT+N +++A+   G 
Sbjct: 630 ILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGA 689

Query: 421 I 421
           +
Sbjct: 690 L 690



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/412 (21%), Positives = 186/412 (45%), Gaps = 6/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K     E  +I+  +KK+     +  ++ L+  L      + A + + E +  G++P+  
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ M+  Y       E  ++   M   G    V ++ IL+  L ++ ++ EA+ + + +
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELL 385

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C  +  TY  L+ GLC  G + +A  +L   +N     D + Y+++++G C+ GR 
Sbjct: 386 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 445

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +E   +L++  + G  PN    N + NG+ +       +     M  + C P  ++Y+TL
Sbjct: 446 DEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTL 505

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K  +   A ++ KEM+  G++ +    + L+ GLC     +   L+ A  ++ + 
Sbjct: 506 INGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC-----QGKKLDMALNLWCQA 560

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K    D   + I+I  L    K ++AL       +   +P  +T N +++        
Sbjct: 561 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDF 620

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++A  +   + ++   P   SY++ +  L    +  DA      A+ +GV+P
Sbjct: 621 ERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLP 672


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 201/390 (51%), Gaps = 7/390 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           ++ FN LL ALV +   ++ V  + +   +G++ + +T +I+I C C+ +       V+ 
Sbjct: 104 ITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLG 163

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +F  G+ P++ TF  L+N LC  GR+ EA+E LD +   G +P + T+  ++ GLC +G
Sbjct: 164 KIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIG 223

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +   A   +  +     +P+V +Y+ ++D  CK    NEA++L       G++P VVT+N
Sbjct: 224 KTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYN 283

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           +L  G C  G   +   L K M + N  PD +++S L++ L K G +  A+S+F +M++ 
Sbjct: 284 SLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQI 343

Query: 325 GFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
             E D    +SL+ G+C  S W+E   L +     E +++ +   D  T+ I +    K 
Sbjct: 344 AMEPDIVTYSSLIHGVCKSSLWKESSTLLN-----EMLSRNIR-PDVVTFSIWVDVFCKK 397

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
               EA   ++  IE G  P  +T+N+++   C   ++D+A  +  +M      P   SY
Sbjct: 398 GMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSY 457

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++LI    + E+  +A  L+     +G+ P
Sbjct: 458 NILIKGYCKSERIDEAKQLFDEMSHKGLTP 487



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 168/324 (51%), Gaps = 11/324 (3%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           AV  F    S G++P   T++ +I   CN   + +A  +   M +    P+V TF+ILV+
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK G + EAL V  +M +I  +P+I TY+ L+ G+C     +E+  +L  + +  ++P
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV T++  +D FCK G  +EA  ++N  IERG+ PNVVT+N+L +GYC      +   + 
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF 442

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM- 342
            +M  + C PD +SY+ L+ G  K  +I  A  +F EM   G   +     +L+ GLC  
Sbjct: 443 DIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQA 502

Query: 343 -KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
            + +  K+L       F+KM       D  TY  ++    K    DEAL  L  A++   
Sbjct: 503 GRPYAAKEL-------FKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALA-LFEALKKSQ 554

Query: 402 I-PRTITFNNVIQALCGEGKIDKA 424
           + P  +    ++  +C  GK++ A
Sbjct: 555 LKPNHVICKILLGGMCKAGKLEDA 578



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 173/366 (47%), Gaps = 41/366 (11%)

Query: 33  AAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDL 91
           +AA +   + ++L   P  +     +D + K   + E +D+F  ++  G + +V  +N L
Sbjct: 226 SAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSL 285

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           +  +    + + A   F E   + + P+  TFSI++   C +    EA  V   M     
Sbjct: 286 IYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAM 345

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            P++ T++ L++ +CKS   KE+  +L++M     +P++ T++  +   C  G V EA  
Sbjct: 346 EPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQS 405

Query: 212 MLMNVKNDGLKPDVYTYTAVMD-----------------------------------GFC 236
           ++  +   GL+P+V TY ++MD                                   G+C
Sbjct: 406 IINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYC 465

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K  R +EA +L +E   +G+TPN +T  TL +G C+ G P     L K M    C PD I
Sbjct: 466 KSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLI 525

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +YSTLL+G  K G +  A+++F+ + +   + +  +   LL G+C     +   LEDA +
Sbjct: 526 TYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMC-----KAGKLEDAKE 580

Query: 357 VFEKMT 362
           +F  ++
Sbjct: 581 LFSSLS 586



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 187/398 (46%), Gaps = 5/398 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E ++  D I   G   +V     ++  L  + +   A+ +  +       P   ++SI+I
Sbjct: 192 EAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIII 251

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C      EA  +   M   G  P V T+  L+  +C SG+ K+A  +  +M     K
Sbjct: 252 DSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMK 311

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++ T++ L+  LC  G V EA  +   +    ++PD+ TY++++ G CK     E+  L
Sbjct: 312 PDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTL 371

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           LNE + R + P+VVTF+   + +CK+G   +   ++ LM +R   P+ ++Y++L++G   
Sbjct: 372 LNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCL 431

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
             ++  A  +F  MV  G   D    N L++G C     + + +++A Q+F++M+ K   
Sbjct: 432 HSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYC-----KSERIDEAKQLFDEMSHKGLT 486

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            +  T+  +I  L +  +   A          G  P  IT++ ++   C  G +D+AL L
Sbjct: 487 PNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALAL 546

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
              + +    P+     +L+  + +  K  DA  L+ +
Sbjct: 547 FEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSS 584



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 159/369 (43%), Gaps = 36/369 (9%)

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
           ++F +A    + M      P +T F  L+ +L +       + +  +M   G   ++ T 
Sbjct: 83  SNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTL 142

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
             L+  LC++  V   + +L  +   G KP + T+  +++G C  GR  EAME L+  + 
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMS 202

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RG  P V T   + NG CK G     +  +K M + +C P+ +SYS +++ L K   +  
Sbjct: 203 RGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNE 262

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEE-----KDLLE--------------- 352
           AV +F  M   G        NSL+ G+C    W++     K++LE               
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322

Query: 353 ---------DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                    +A  VF KM +     D  TY  +I  + K     E+   L+  +     P
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI------TKLDQLEKSY 457
             +TF+  +   C +G + +A  ++ LM E    P+  +Y+ L+      +++D+  K +
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF 442

Query: 458 DACALYGAA 466
           D     G A
Sbjct: 443 DIMVNKGCA 451



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 102/199 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   I + + + G   +V  +N L+    + ++ + A K F    + G AP+  
Sbjct: 396 KKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVL 455

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I+I+ YC      EA+++ D M   G  PN  T T L++ LC++GR   A E+  +M
Sbjct: 456 SYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           G  GC P++ TY+ LL G C  G ++EA  +   +K   LKP+      ++ G CK G+ 
Sbjct: 516 GSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKL 575

Query: 242 NEAMELLNEAIERGVTPNV 260
            +A EL +      + P+V
Sbjct: 576 EDAKELFSSLSIEELQPDV 594


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 201/480 (41%), Gaps = 77/480 (16%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   +F+ +        +S FN LL A+  +      +  +   S  GLAP+  T +I+I
Sbjct: 75  EAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILI 134

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
            CYCN N       V+  M   G+ PN  TFT LV  LC   R+ EA  +L +M R+G +
Sbjct: 135 NCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYR 194

Query: 188 PNIQTYNCLLKGLCYVGR-----------------------------------------V 206
           PN+ TY  LL GLC  G                                          +
Sbjct: 195 PNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLI 254

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           ++  E+ + +K  G+ PDV  Y++++ G C  GR   A  L NE ++ GV PNVVTFN L
Sbjct: 255 DKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVL 314

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +  CK G   +   LLKLM +R   PD  +Y+TL++G    G+I  A  +F  M   G 
Sbjct: 315 IDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGI 374

Query: 327 EVDERMMNSLLRGLCM--KSWEEKDL----------------------------LEDAYQ 356
           E D    N L+ G C   +  E K L                            + DA+ 
Sbjct: 375 ETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWN 434

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +F +M       +  TY I++  L K     EA+   H+       P    FN +I  LC
Sbjct: 435 LFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLC 494

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKSYDACALYGAALKQGVIP 473
              KI+ A  L   +      P+  +Y ++I  L    QLE + D   L+    ++G  P
Sbjct: 495 KARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKD---LFLGMEEKGCAP 551



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 191/365 (52%), Gaps = 5/365 (1%)

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           + F E    G++P+   +S +I   C+   +  A+ + + M D G HPNV TF +L+++L
Sbjct: 259 ELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDAL 318

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK+G+++EA  +L  M + G  P+  TYN L+ G C  GR+++A ++ +++++ G++ D 
Sbjct: 319 CKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDA 378

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            +Y  +++G+CK GR  EA +L  E + + + P V+T+NTL  G  +EG       L   
Sbjct: 379 VSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGE 438

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           MK  +  P+  +Y+ LL+GL K   +  A+ +F  +    F+   ++ N L+ GLC    
Sbjct: 439 MKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLC---- 494

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            +   +E A ++F +++ +    +  TY ++I  L K  + + A        E G  P  
Sbjct: 495 -KARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNL 553

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           +TFN +++  C   ++ K + LL  M E    P  ++  +++  L + EK  +   L   
Sbjct: 554 VTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPT 613

Query: 466 ALKQG 470
              QG
Sbjct: 614 FPAQG 618



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 189/402 (47%), Gaps = 14/402 (3%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA----SSYGLA- 117
            S + E   +   + + G   +V  +  LL  L M      AVK   E       +G+  
Sbjct: 175 GSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTI 234

Query: 118 -PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            PN   +  +I   C      + +++   M   G  P+V  ++ +++ +C +GR + A  
Sbjct: 235 KPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKG 294

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           + ++M   G  PN+ T+N L+  LC  G++EEA  +L  +   G  PD +TY  ++DGFC
Sbjct: 295 LFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFC 354

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
             GR ++A +L      +G+  + V++N L NGYCK G  ++   L + M  +  +P  I
Sbjct: 355 LEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVI 414

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y+TLL GL + GK+R A ++F EM       +    N LL GLC     + + L +A +
Sbjct: 415 TYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLC-----KNNHLSEAME 469

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +F  +           +  +I  L K +K + A    +     G  P  IT+  +I  LC
Sbjct: 470 LFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEK 455
             G+++ A  L   M E    P+  +++ L+      D+++K
Sbjct: 530 KSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQK 571



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 173/381 (45%), Gaps = 11/381 (2%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           ++  A   F+        P   +F+ ++        +F+   +   M   G  P+  T  
Sbjct: 72  KRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLN 131

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           IL+N  C   ++   L VL +M R G  PN  T+  L+KGLC   R+ EA  +L  +   
Sbjct: 132 ILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRM 191

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAM----ELLNEAIERGVT--PNVVTFNTLFNGYCKE 273
           G +P+V TY  +++G C  G +  A+    E+LN     GVT  PN+V + T+ +  CK+
Sbjct: 192 GYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKD 251

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   KG  L   MK R   PD ++YS++++G+   G+   A  +F EMV  G   +    
Sbjct: 252 GLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTF 311

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           N L+  LC     +   +E+A  + + M ++    D  TY  +I       + D+A    
Sbjct: 312 NVLIDALC-----KAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLF 366

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
                 G     +++N +I   C  G++ +A  L   M     +P+  +Y+ L+T L + 
Sbjct: 367 VSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFRE 426

Query: 454 EKSYDACALYGAALKQGVIPQ 474
            K  DA  L+G      + P+
Sbjct: 427 GKVRDAWNLFGEMKVHDLTPE 447



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 136/290 (46%), Gaps = 1/290 (0%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E +D   +P  +     +D + KA  ++E   +   + + G +     +N L+    +  
Sbjct: 298 EMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEG 357

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
             + A   F    S G+  ++ +++++I  YC      EA+K+   M      P V T+ 
Sbjct: 358 RIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYN 417

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L+  L + G++++A  +  +M      P   TYN LL GLC    + EA E+   ++N 
Sbjct: 418 TLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENH 477

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
             +P +  +  ++DG CK  +   A EL N     G+ PNV+T+  + +G CK G     
Sbjct: 478 DFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENA 537

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
             L   M+++ C P+ ++++TL+ G  +  +++  V + +EM    F  D
Sbjct: 538 KDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPD 587



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 93/196 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   +++  ++F  +K          +N LL  L   N    A++ F    ++   P+  
Sbjct: 425 REGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQ 484

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I   C       AR++ + +   G  PNV T+T++++ LCKSG+L+ A ++   M
Sbjct: 485 IFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGM 544

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PN+ T+N L++G C    +++  E+L  +      PD  T + V+D   K  + 
Sbjct: 545 EEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKY 604

Query: 242 NEAMELLNEAIERGVT 257
            E + LL     +G T
Sbjct: 605 REYLHLLPTFPAQGQT 620


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 194/385 (50%), Gaps = 7/385 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + +   + +   +  +  +N L+  L    + + AV    E  + G  PNS T + ++
Sbjct: 162 EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM 221

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C      EA ++++ M   G+  +V  +  L++  C +G L    E+ D+M   G  
Sbjct: 222 DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 281

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            N+ TY+CL+ GLC +G+ +EA  +L  +   G+ PDV TYT ++DG CK GR+  AM+L
Sbjct: 282 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 341

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           LN  +E+G  P+ VT+N L +G CKEG  +    +L++M ++    D ++Y+TL+ GL  
Sbjct: 342 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 401

Query: 308 WGKIRPAVSIFKEMV--RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            GK+  A+ +F  M       E +    N L+ GLC     ++  L  A ++  KM KK 
Sbjct: 402 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLC-----KEGRLTKAVKIHRKMVKKG 456

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           S  +  TY +++    K  K  EA+      +++G +P + T++ +I   C    ++ A 
Sbjct: 457 SCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAK 516

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL 450
            L   M  H   P+   Y+ L+  L
Sbjct: 517 GLFCEMRTHGLNPALFDYNTLMASL 541



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 184/361 (50%), Gaps = 7/361 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G   N +  +I+++  C     FEA  +I  M      P++ ++  L+N LCK+ +LKEA
Sbjct: 139 GFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEA 198

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           + +L +M   GC PN  T   L+ GLC  GR++EA E+L  +K  G   DV  Y  ++ G
Sbjct: 199 VGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISG 258

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           FC  G  +   EL +E + +G++ NVVT++ L +G C+ G   +   +L  M +    PD
Sbjct: 259 FCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPD 318

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++Y+ L++GL K G+   A+ +   MV  G E      N LL GLC     ++ L+ DA
Sbjct: 319 VVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC-----KEGLVIDA 373

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI--PRTITFNNVI 412
           +++   M +K    D  TY  +++ L    K DEAL   +   +  +   P   TFN +I
Sbjct: 374 FKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLI 433

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             LC EG++ KA+ +   M +     +  +Y+ML+    +  K  +A  L+   L  G +
Sbjct: 434 GGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFV 493

Query: 473 P 473
           P
Sbjct: 494 P 494



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 215/463 (46%), Gaps = 37/463 (7%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+     +D + K   + E +++ +++KK G +  V  +  L+         +   + 
Sbjct: 212 PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKEL 271

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F E    G++ N  T+S ++   C    + EA  V++ M ++G HP+V T+T L++ LCK
Sbjct: 272 FDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCK 331

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            GR   A+++L+ M   G +P+  TYN LL GLC  G V +A+++L  +   G K DV T
Sbjct: 332 DGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVT 391

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAI--ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           Y  +M G C  G+ +EA++L N     E  + PNV TFN L  G CKEG   K V + + 
Sbjct: 392 YNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRK 451

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC---- 341
           M K+    + ++Y+ LL G LK GKI+ A+ ++K+++  GF  +    + L+ G C    
Sbjct: 452 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 511

Query: 342 --------------------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
                                     M S  ++  LE A  +F++M       D  ++  
Sbjct: 512 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 571

Query: 376 VIRTLGKGKKTDEALIH--LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
           +I   G  K  D   +       +EMG  P  +TF+ +I  L   G++D+A   L  M  
Sbjct: 572 MID--GTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVA 629

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
               P    YD L+  L     + +   L      +G +  RK
Sbjct: 630 SGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRK 672



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 180/385 (46%), Gaps = 7/385 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D+ + + + G   S   +N LL  L        A K        G   +  T++ +++ 
Sbjct: 339 MDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKG 398

Query: 130 YCNKNDFFEARKVIDCMFDN--GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
            C+K    EA K+ + MFDN     PNV TF +L+  LCK GRL +A+++  +M + G  
Sbjct: 399 LCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSC 458

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            N+ TYN LL G    G+++EA E+   V + G  P+ +TY+ ++DGFCK+   N A  L
Sbjct: 459 GNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGL 518

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E    G+ P +  +NTL    CKEG+  +   L + M   NC PD IS++T+++G LK
Sbjct: 519 FCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLK 578

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G  +    +  +MV  G   D    ++L+  L      +   L++A    E+M      
Sbjct: 579 AGDFQFVKELQMKMVEMGLRPDALTFSTLINRL-----SKLGELDEAKSALERMVASGFT 633

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D   Y  +++ L     T E +  LH     G +      + ++  LC   +    + L
Sbjct: 634 PDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMEL 693

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQ 452
           L   ++     +  S + L+ +L Q
Sbjct: 694 LPTFFQGTSEGASISCNELLMQLHQ 718



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 161/326 (49%), Gaps = 7/326 (2%)

Query: 127 IRCYCNK--NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           +R  C K  + F EA  +     D    P+  T   LV++L +S     A  V  +M  +
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
              P+  + + L++      + +  + ++  V   G   +V+    V+ G C+ G   EA
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           M L+ E   + V+P++V++NTL NG CK     + VGLL  M+   C P+ ++ +TL++G
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K G++  A+ + + M + GF+ D  +  +L+ G C         L+   ++F++M  K
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFC-----NNGNLDRGKELFDEMLGK 278

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               +  TY  ++  L +  +  EA   L+   E G  P  +T+  +I  LC +G+   A
Sbjct: 279 GISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHA 338

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKL 450
           + LL LM E  + PS  +Y++L++ L
Sbjct: 339 MDLLNLMVEKGEEPSNVTYNVLLSGL 364



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 123/244 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L + + I   + K G+  ++  +N LL   +   + + A++ + +    G  PNS+
Sbjct: 438 KEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF 497

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+I  +C       A+ +   M  +G +P +  +  L+ SLCK G L++A  +  +M
Sbjct: 498 TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 557

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           G   C+P+I ++N ++ G    G  +   E+ M +   GL+PD  T++ +++   K+G  
Sbjct: 558 GNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGEL 617

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA   L   +  G TP+ + +++L  G   +G   + + LL  M  +  + D+   ST+
Sbjct: 618 DEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTI 677

Query: 302 LNGL 305
           L  L
Sbjct: 678 LTCL 681



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 100/214 (46%), Gaps = 6/214 (2%)

Query: 61  IKASPLKERIDIFDSIKKDG---TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA 117
           +KA  +KE ++++  +   G    +++ S   D    + MLN    A   F E  ++GL 
Sbjct: 472 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLN---IAKGLFCEMRTHGLN 528

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P  + ++ ++   C +    +A+ +   M +    P++ +F  +++   K+G  +   E+
Sbjct: 529 PALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL 588

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
             +M  +G +P+  T++ L+  L  +G ++EA   L  +   G  PD   Y +++ G   
Sbjct: 589 QMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSS 648

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
            G + E + LL++   +G   +    +T+    C
Sbjct: 649 KGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 682



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 44/209 (21%), Positives = 77/209 (36%), Gaps = 36/209 (17%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           + LDL   P S      +D   K   L     +F  ++  G N ++ D+N L+ +L    
Sbjct: 486 QVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 545

Query: 100 EQETAVKFFSEASS-----------------------------------YGLAPNSWTFS 124
             E A   F E  +                                    GL P++ TFS
Sbjct: 546 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 605

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +I       +  EA+  ++ M  +G+ P+   +  L+  L   G   E + +L QM   
Sbjct: 606 TLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 665

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           G   + +  + +L  LC+  +  +  E+L
Sbjct: 666 GTVLDRKIVSTILTCLCHSIQEVDVMELL 694


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 203/389 (52%), Gaps = 8/389 (2%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N ++    +  + + A +  ++     + P+S+T++ +IR  C +     A  V+D
Sbjct: 124 VMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVVLD 180

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G  P+V T+TIL+ + CK    K+A+++LD+M   GC P+I TYN ++ G+C  G
Sbjct: 181 DMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEG 240

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           RV++A E L ++ + G +P+  +Y  V+ G C   R  +A +L+ E  ++G  PNVVTFN
Sbjct: 241 RVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFN 300

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +  C+ G     + +L  + K  C P+ +SY+ +L+   K  K+  A++  + MV  
Sbjct: 301 MLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSR 360

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D    N+LL  LC +  E    +E  +Q+ +K    V +    +Y  VI  L K  
Sbjct: 361 GCYPDIVSYNTLLTALC-RGGEVDAAVELLHQLKDKGCTPVLI----SYNTVIDGLTKAG 415

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           KT EAL  L+  +  G  P  IT++ +   LC E +I++A+     + +    P+   Y+
Sbjct: 416 KTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYN 475

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++  L +  ++++A  L+   +  G +P
Sbjct: 476 AILLGLCKRRETHNAIDLFIYMISNGCMP 504



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 197/385 (51%), Gaps = 5/385 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L        A+    +    G  P+  T++I++   C ++ + +A K++D M 
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P++ T+ ++VN +C+ GR+ +A+E L  +   GC+PN  +YN +LKGLC   R E
Sbjct: 219 AKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWE 278

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A +++  +   G  P+V T+  ++   C+ G    AME+L++  + G TPN +++N + 
Sbjct: 279 DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPIL 338

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           + +CK+    + +  ++LM  R C PD +SY+TLL  L + G++  AV +  ++   G  
Sbjct: 339 HAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 398

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N+++ GL  K+ + K+ LE    +  +M  K    D  TY  +   L +  + +
Sbjct: 399 PVLISYNTVIDGL-TKAGKTKEALE----LLNEMVTKGLQPDIITYSTISSGLCREDRIE 453

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA+       +MG  P T+ +N ++  LC   +   A+ L   M  +  +P+ ++Y +LI
Sbjct: 454 EAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILI 513

Query: 448 TKLDQLEKSYDACALYGAALKQGVI 472
             L       +A  L G    +GV+
Sbjct: 514 EGLTYEGLVKEARELLGELCSRGVV 538



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 169/319 (52%), Gaps = 5/319 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S  K+ + + D ++  G    +  +N ++  +      + A++F     S+G  PN+ 
Sbjct: 203 KRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTV 262

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I+++  C    + +A K++  M   GY PNV TF +L++ LC+ G ++ A+EVLDQ+
Sbjct: 263 SYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQI 322

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC PN  +YN +L   C   +++ A   +  + + G  PD+ +Y  ++   C+ G  
Sbjct: 323 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEV 382

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ELL++  ++G TP ++++NT+ +G  K G   + + LL  M  +   PD I+YST+
Sbjct: 383 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTI 442

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            +GL +  +I  A+  F ++   G   +  + N++L GLC +         +A  +F  M
Sbjct: 443 SSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRET-----HNAIDLFIYM 497

Query: 362 TKKVSVTDPGTYGIVIRTL 380
                + +  TY I+I  L
Sbjct: 498 ISNGCMPNESTYTILIEGL 516



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 188/395 (47%), Gaps = 42/395 (10%)

Query: 111 ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT--FTILVNSLCKS 168
           A+S    P+    +  +R    + D  EA ++++ M  +G  P+        L+  LC S
Sbjct: 50  AASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCAS 107

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           GR  EA  VL       C+P++  YN ++ G C  G+++ A  ++ ++    ++PD YTY
Sbjct: 108 GRTAEARRVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTY 159

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
             ++ G C  GR+  A+ +L++ + RG  P+VVT+  L    CK     + + LL  M+ 
Sbjct: 160 NTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRA 219

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEE 347
           + C PD I+Y+ ++NG+ + G++  A+   K +   G E +    N +L+GLC  + WE+
Sbjct: 220 KGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWED 279

Query: 348 -----------------------------KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
                                        + L+E A +V +++ K     +  +Y  ++ 
Sbjct: 280 AEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILH 339

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
              K KK D A+  +   +  G  P  +++N ++ ALC  G++D A+ LL  + +    P
Sbjct: 340 AFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTP 399

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              SY+ +I  L +  K+ +A  L    + +G+ P
Sbjct: 400 VLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQP 434


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 202/408 (49%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +   +   G    +  +N +L  L M        +   E      APN  TF+ 
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C    F    +V+  M ++G  P++  +  +++ +CK G L+ A E+L++M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KPN+  YN +LKGLC   R +EA E+L  +       D  T+  ++D FC+ G  +  +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL + +  G  P+V+T+ T+ NG+CKEG   + V LLK M    C P+ +SY+ +L GL
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+   A  +  +M++ G   +    N+L+  LC     +K L+E A ++ ++M    
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC-----KKGLVEQAIELLKQMLVNG 491

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  +Y  VI  LGK  KT+EAL  L+  +  G  P TI ++++  AL  EG+++K +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   + +         Y+ +I+ L +  ++  A   +   +  G +P
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 189/364 (51%), Gaps = 6/364 (1%)

Query: 66  LKERI-DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           L ER+ ++   + + G    +  +  ++  +      E A +  +   SYGL PN   ++
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +++  C+   + EA +++  MF      +  TF ILV+  C++G +   +E+L+QM   
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           GC P++ TY  ++ G C  G ++EA  +L ++ + G KP+  +YT V+ G C  GR  +A
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            EL+++ I++G  PN VTFNTL N  CK+G   + + LLK M    C PD ISYST+++G
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K GK   A+ +   MV  G   +  + +S+    C  S E +  +    Q+F+ +   
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSI---ACALSREGR--VNKVIQMFDNIKDT 560

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              +D   Y  VI +L K  +TD A+    + +  G +P   T+  +I+ L  EG   +A
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA 620

Query: 425 LLLL 428
             LL
Sbjct: 621 QELL 624



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 177/359 (49%), Gaps = 7/359 (1%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           + PN++TF  ++R  C +    +A +V+D M   G  P    + +++ + C+SG  + ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            VL+ M   GC  +    N +L  +C  G V+EA  +L  +   G + D+ +Y AV+ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           C   R  +  EL++E +     PN+VTFNTL    C+ G   +   +L  M +  C PD 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDA 354
             Y+T+++G+ K G +  A  I   M  +G + +    N++L+GLC  + W+E      A
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE------A 340

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++  +M +K    D  T+ I++    +    D  +  L   +  G +P  IT+  VI  
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            C EG ID+A++LL  M      P+  SY +++  L    +  DA  L    ++QG  P
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPP 459



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 184/405 (45%), Gaps = 40/405 (9%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++   E S  G AP    + +++   C    F  + +V++ M   G   +     +++N
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLN 189

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV-------------------- 203
           ++C+ G + EA+ +L ++   GC+ +I +YN +LKGLC                      
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 204 ---------------GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
                          G  E  +E+L  +   G  PD+  Y  ++DG CK G    A E+L
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           N     G+ PNVV +NT+  G C      +   LL  M +++C  D ++++ L++   + 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G +   + + ++M+  G   D     +++ G C     ++ L+++A  + + M+      
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFC-----KEGLIDEAVMLLKSMSSCGCKP 424

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +  +Y IV++ L    +  +A   +   I+ G  P  +TFN +I  LC +G +++A+ LL
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M  +   P   SY  +I  L +  K+ +A  L    + +G+ P
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 164/347 (47%), Gaps = 9/347 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I + +   G   +V  +N +L  L      + A +  SE        +  TF+I++  +
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C         ++++ M  +G  P+V T+T ++N  CK G + EA+ +L  M   GCKPN 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  +LKGLC  GR  +A E++  +   G  P+  T+  +++  CK G   +A+ELL +
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G +P++++++T+ +G  K G   + + LL +M  +   P+ I YS++   L + G+
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +   + +F  +       D  + N+++  LC K WE     + A   F  M     + + 
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVLYNAVISSLC-KRWET----DRAIDFFAYMVSNGCMPNE 601

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMG----HIPRTITFNNVIQ 413
            TY ++I+ L       EA   L      G    H+ R    +N  Q
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGISNCTQ 648



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 13/300 (4%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+ SLC +GR  EA   L   G       +  YN ++ G C  G++  A  +   V    
Sbjct: 53  LIRSLCSAGRTAEAARALADAGD---AAGVVAYNAMVAGYCRAGQLAAARRLAAAVP--- 106

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + P+ YT+  V+ G C  GR  +A+E+L+E   +G  P    ++ +    C+ G     V
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +L+ M  + C  D  + + +LN + + G +  AV + +++  FG E D    N++L+GL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 341 CM-KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           CM K W       D  ++ ++M +     +  T+  +I  L +    +     L    E 
Sbjct: 227 CMAKRW------GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P    +  +I  +C EG ++ A  +L  M  +   P+   Y+ ++  L   E+  +A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 105/231 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +  S+   G   +   +  +L  L        A +  S+    G  PN  
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C K    +A +++  M  NG  P++ +++ +++ L K+G+ +EALE+L+ M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN   Y+ +   L   GRV +  +M  N+K+  ++ D   Y AV+   CK   +
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           + A++     +  G  PN  T+  L  G   EG   +   LL  +  R  L
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 189/374 (50%), Gaps = 8/374 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S  DF  LL ++  +    T +   ++  S+G+ P+ +T +I+I  +C+      A  V+
Sbjct: 111 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 170

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   G  P+ TTF  L+  LC  G++ EAL + D+    G +P++ TY  L+ GLC V
Sbjct: 171 AKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKV 230

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A  +L ++     +P+V  Y  ++D  CK  +  EA  L +E I +G++P++ T+
Sbjct: 231 GNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTY 290

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L +  C          LL  M     +P+ + +ST+++ L K G I  A  +   M++
Sbjct: 291 NSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIK 350

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E D     +L+ G C++S      +++A +VF+ M  K  V +  +Y I+I    + 
Sbjct: 351 RGVEPDVVTYTALMDGHCLRSE-----MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 405

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           ++ D+A+  L      G I  T+T+N +I  LC  G++  A+ L   M    +IP   +Y
Sbjct: 406 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 465

Query: 444 DMLITKLDQLEKSY 457
            +L   LD L K++
Sbjct: 466 RIL---LDYLCKNH 476



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 184/406 (45%), Gaps = 9/406 (2%)

Query: 24  PQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTN 82
           P FN L     A  S    L +   P ++   + +  I K       + +   +   G  
Sbjct: 88  PHFNTL---DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIP 144

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
             V   N L+ +   L     A    ++    G  P++ TF+ +IR  C +    EA  +
Sbjct: 145 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL 204

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
            D     G+ P+V T+  L+N LCK G    A+ +L  M +  C+PN+  YN ++  LC 
Sbjct: 205 FDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK 264

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
             +V EA+ +   +   G+ PD++TY +++   C +        LLNE +   + PNVV 
Sbjct: 265 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 324

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           F+T+ +  CKEG       ++ +M KR   PD ++Y+ L++G     ++  AV +F  MV
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 384

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
             G   + R  N L+ G C     +K     A  + E+M+ +  + D  TY  +I  L  
Sbjct: 385 HKGCVPNVRSYNILINGYCQIQRMDK-----AMGLLEQMSLQGLIADTVTYNTLIHGLCH 439

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             +   A+   H  +  G IP  +T+  ++  LC    + +A++LL
Sbjct: 440 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLL 485



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 163/324 (50%), Gaps = 5/324 (1%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G  P+V T  IL+NS C   RL  A  VL ++ ++GC+P+  T+N L++GLC  G++ EA
Sbjct: 142 GIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA 201

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             +      +G +PDV TY  +M+G CKVG ++ A+ LL   +++   PNV+ +NT+ + 
Sbjct: 202 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDS 261

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            CK+    +   L   M  +   PD  +Y++L++ L    + +   ++  EMV      +
Sbjct: 262 LCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 321

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
             + ++++  LC     ++ ++  A+ V + M K+    D  TY  ++       + DEA
Sbjct: 322 VVVFSTVVDALC-----KEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEA 376

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           +      +  G +P   ++N +I   C   ++DKA+ LL  M     I    +Y+ LI  
Sbjct: 377 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 436

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
           L  + +   A AL+   +  G IP
Sbjct: 437 LCHVGRLQHAIALFHEMVASGQIP 460



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 137/279 (49%), Gaps = 1/279 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + K   + E  ++F  +   G +  +  +N L+ AL  L E +     
Sbjct: 250 PNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTL 309

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            +E  +  + PN   FS ++   C +     A  V+D M   G  P+V T+T L++  C 
Sbjct: 310 LNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCL 369

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              + EA++V D M   GC PN+++YN L+ G C + R+++A  +L  +   GL  D  T
Sbjct: 370 RSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVT 429

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++ G C VGR   A+ L +E +  G  P++VT+  L +  CK     + + LLK ++
Sbjct: 430 YNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE 489

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             N   D + Y+  ++G+ + G++  A  +F  +   GF
Sbjct: 490 GSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGF 528



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 154/293 (52%), Gaps = 5/293 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +  S+ +     +V  +N ++ +L    +   A   FSE  + G++P+ +T++ +I  
Sbjct: 237 IRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHA 296

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            CN  ++     +++ M ++   PNV  F+ +V++LCK G +  A +V+D M + G +P+
Sbjct: 297 LCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPD 356

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY  L+ G C    ++EA ++   + + G  P+V +Y  +++G+C++ R ++AM LL 
Sbjct: 357 VVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLE 416

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +   +G+  + VT+NTL +G C  G     + L   M     +PD ++Y  LL+ L K  
Sbjct: 417 QMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNH 476

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
            +  A+ + K +     + D  + N  + G+C ++ E    LE A  +F  ++
Sbjct: 477 HLAEAMVLLKAIEGSNLDADILVYNIAIDGMC-RAGE----LEAARDLFSNLS 524



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 5/181 (2%)

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P  + ++ LL  + K       +S+  +M  FG   D   +N L+   C         L 
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFC-----HLRRLG 164

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A+ V  K+ K     D  T+  +IR L    K  EAL      I  G  P  +T+  ++
Sbjct: 165 YAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLM 224

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             LC  G    A+ LL  M +    P+  +Y+ +I  L +  +  +A  L+   + +G+ 
Sbjct: 225 NGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGIS 284

Query: 473 P 473
           P
Sbjct: 285 P 285


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 203/407 (49%), Gaps = 5/407 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FDS+  DG   +V  +N L+ AL     ++ A+    +    G  PN  T++ ++  +  
Sbjct: 178 FDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFR 237

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
             +   A +++  M + G  PN+ TF  +VN +CK+G++++A +V D+M R G  P+  +
Sbjct: 238 AGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVS 297

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN L+ G C  G   EA  +   +   G+ PDV T+T+++   CK G    A+ L+ +  
Sbjct: 298 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR 357

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           ERG+  N VTF  L +G+CK+G     +  ++ MK+    P  + Y+ L+NG    G++ 
Sbjct: 358 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMD 417

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A  +  EM   G + D    ++++   C K+ +       A+++ ++M +K  + D  T
Sbjct: 418 EARELLHEMEAKGLKPDVVTYSTIISAYC-KNCDT----HSAFELNQQMLEKGVLPDAIT 472

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y  +IR L   K+  +A +   + I++G  P   T+ ++I   C EG ++ AL L   M 
Sbjct: 473 YSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMV 532

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           +   +P   +Y +LI  L +  ++ +A  L      +  IP     D
Sbjct: 533 KAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYD 579



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 182/366 (49%), Gaps = 30/366 (8%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
            AR+  D M  +G  PNV T+ ILV +LC  G  KEAL +L  M   GC PN+ TYN L+
Sbjct: 173 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLV 232

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
                 G V+ A  ++  ++  GLKP++ T+ ++++G CK G+  +A ++ +E +  G+ 
Sbjct: 233 AAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLA 292

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+ V++NTL  GYCK G   + + +   M ++  +PD +++++L++ + K G +  AV++
Sbjct: 293 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTL 352

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL-------------------------- 351
            ++M   G +++E    +L+ G C K + +  LL                          
Sbjct: 353 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCM 412

Query: 352 ----EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
               ++A ++  +M  K    D  TY  +I    K   T  A       +E G +P  IT
Sbjct: 413 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAIT 472

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           ++++I+ LCGE ++  A +L   M +    P   +Y  LI    +      A +L+   +
Sbjct: 473 YSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMV 532

Query: 468 KQGVIP 473
           K GV+P
Sbjct: 533 KAGVLP 538



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 182/353 (51%), Gaps = 6/353 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +++ G   ++  FN ++  +    + E A K F E    GLAP+  +++ ++  YC    
Sbjct: 251 MREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGC 310

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA  V   M   G  P+V TFT L++ +CK+G L+ A+ ++ QM   G + N  T+  
Sbjct: 311 SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTA 370

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G C  G +++A   +  +K   +KP V  Y A+++G+C VGR +EA ELL+E   +G
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           + P+VVT++T+ + YCK         L + M ++  LPD I+YS+L+  L    ++  A 
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH 490

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +FK M++ G + DE    SL+ G C     ++  +E A  + +KM K   + D  TY +
Sbjct: 491 VLFKNMIKLGLQPDEFTYTSLIDGHC-----KEGNVESALSLHDKMVKAGVLPDVVTYSV 545

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +I  L K  +  EA   L        IP    ++ ++   C + ++   L LL
Sbjct: 546 LINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHC-CRKAELKSVLALL 597



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 212/467 (45%), Gaps = 59/467 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++   +FD + ++G       +N L+           A+  F+E +  G+ P+  
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 331

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C   +   A  ++  M + G   N  TFT L++  CK G L +AL  +  M
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +   KP++  YN L+ G C VGR++EA E+L  ++  GLKPDV TY+ ++  +CK   +
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451

Query: 242 NEAMELLNEAIERGVTPNVVTFN-----------------------------------TL 266
           + A EL  + +E+GV P+ +T++                                   +L
Sbjct: 452 HSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 511

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR-------------- 312
            +G+CKEG     + L   M K   LPD ++YS L+NGL K  +                
Sbjct: 512 IDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDP 571

Query: 313 -PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
            PA + +  ++    + + + + +LL+G CMK      L+ +A +V++ M  +    D  
Sbjct: 572 IPANTKYDALMHCCRKAELKSVLALLKGFCMKG-----LMNEADKVYQSMLDRNWNLDGS 626

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            Y ++I    +     +AL      ++ G  P + +  ++I+ L   G + +A  ++  +
Sbjct: 627 VYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 686

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDAC--ALYGAALKQGVIPQRK 476
             +  +    +   LI  L+  E + DA    L+G A K G++P  +
Sbjct: 687 LNYCSLADAEASKALI-DLNLNEGNVDAVLDVLHGMA-KDGLLPSPR 731


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 189/385 (49%), Gaps = 6/385 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K  +++ D++   G +  +  +N L+  L  L E E AVK   +  S   +PN+ T++ +
Sbjct: 325 KHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAI 384

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I   C +N   EA ++   +   G  P+V TF  L+  LC S   K A+++ ++M   GC
Sbjct: 385 ISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGC 444

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +P+  TYN L+  LC   ++EEA  +L  ++ +G   +V  Y  ++DGFCK  R  EA E
Sbjct: 445 RPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEE 504

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           + +E   +GV+ + VT+NTL +G CK         L+  M      PDK +Y++LL    
Sbjct: 505 IFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFC 564

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G I+ A  I + M   G   D     +L+ GLC     +   ++ A ++   +  K  
Sbjct: 565 KTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC-----KAGRVQVASRLLRSIQMKGM 619

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC-GEGKIDKAL 425
           V  P  Y  VI+ L K  +T EA+      ++    P  IT+  V + LC G G I +A+
Sbjct: 620 VLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAV 679

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL 450
                M E   IP  +S+ ML   L
Sbjct: 680 DFTVEMIERGNIPEFSSFVMLAEGL 704



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 200/420 (47%), Gaps = 30/420 (7%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           + A+ LK       S+ +      VS FN L+ AL   ++   A+    E  SYGL+P+ 
Sbjct: 179 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 238

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+ +++ Y    +   A ++ + M + G      T  +L+N  CK GR+ +AL  + +
Sbjct: 239 TTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 298

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
               G +P+  TYN L+ GLC +G  + A E++  +   GL PD+YTY +++ G CK+G 
Sbjct: 299 AVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGE 358

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA+++L++ + R  +PN VT+N + +  CKE    +   + +L+  +  LPD  ++++
Sbjct: 359 IEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNS 418

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL---------- 350
           L+ GL      + A+ +F+EM   G   DE   N L+  LC     E+ L          
Sbjct: 419 LIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNG 478

Query: 351 --------------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                               +E+A ++F++M  +    D  TY  +I  L K K+ ++A 
Sbjct: 479 CARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAA 538

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             +   I  G  P   T+N+++   C  G I KA  ++  M      P   +Y  LI+ L
Sbjct: 539 QLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGL 598



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 42/398 (10%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           Y + P++  +++++    + N           M       +V+TF IL+ +LCK+ +++ 
Sbjct: 162 YRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRP 221

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A+ ++++M   G  P+  T+  +++G    G ++ A  +   +   G      T   +++
Sbjct: 222 AILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLIN 281

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           GFCK GR ++A+  + EA+  G  P+  T+NTL NG CK G     + ++  M      P
Sbjct: 282 GFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDP 341

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRF----------------------------- 324
           D  +Y++L++GL K G+I  AV I  +MV                               
Sbjct: 342 DIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIA 401

Query: 325 ------GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
                 G   D    NSL++GLC+ S  +      A  +FE+M  K    D  TY ++I 
Sbjct: 402 RLLTSKGILPDVCTFNSLIQGLCLSSNHKS-----AMDLFEEMKGKGCRPDEFTYNMLID 456

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTIT-FNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
           +L   +K +EAL +L   +E+    R +  +N +I   C   +I++A  +   M      
Sbjct: 457 SLCSSRKLEEAL-NLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVS 515

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
               +Y+ LI  L + ++  DA  L    + +G+ P +
Sbjct: 516 RDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDK 553



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 170/391 (43%), Gaps = 54/391 (13%)

Query: 91  LLMALVMLNEQETAVKFFSEASSY-GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
           L+  L    ++  A++ F+ AS      P+S  +  ++R       F   R+V++ M  +
Sbjct: 67  LIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLS 126

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEAL---EVLDQMGRIGCKPNIQTYNCLLKGLCYVGR- 205
           G   +   F I V S  K     E +   +V++   RI  KP+ + YN LL  L    + 
Sbjct: 127 GCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRI--KPDTRFYNVLLNVLVDANKL 184

Query: 206 --VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
             VE A+  ++  +   ++ DV T+  ++   CK  +   A+ ++ E    G++P+  TF
Sbjct: 185 KLVESAHSSMVRRR---IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTF 241

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
            T+  GY + G     + + + M +  C    ++ + L+NG  K G+I  A+S  +E V 
Sbjct: 242 TTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVS 301

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            GF  D+   N+L+ GLC                                      +G  
Sbjct: 302 EGFRPDQFTYNTLVNGLC-------------------------------------KIGHA 324

Query: 384 KKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
           K   E +     A+ +G + P   T+N++I  LC  G+I++A+ +L  M      P+  +
Sbjct: 325 KHAMEVV----DAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVT 380

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           Y+ +I+ L +  +  +A  +      +G++P
Sbjct: 381 YNAIISSLCKENRVDEATEIARLLTSKGILP 411


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 212/429 (49%), Gaps = 6/429 (1%)

Query: 38  STAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALV 96
           S  + L L  +  SL   RF  + +  + +   I  F+ + +     S  DFN LL ++ 
Sbjct: 13  SGTQMLSLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIA 72

Query: 97  MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
            +    T +    +  S+G+ PN +T  I+I  +C+ N    A  V+  +   G+ P+  
Sbjct: 73  KMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTA 132

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           TFT L+  +   G++ EAL + D+M   G +P++ TY  L+ GLC VG    A  +L ++
Sbjct: 133 TFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 192

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                +P+V+ Y  ++D  CK  +  EA  L +E + +G++P++ T+N+L +  C     
Sbjct: 193 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEW 252

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                LL  M     +PD +S++T+++ L K GK+  A  +  +M++ G E +     +L
Sbjct: 253 KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTAL 312

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           + G C+ S      +++A +VF+ M  K  + +  +Y  +I    K ++ D+A+      
Sbjct: 313 MDGHCLLSE-----MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 367

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
                IP T+T++ +I  LC   ++  A+ L   M   ++IP+  +Y +L+  L +    
Sbjct: 368 CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYL 427

Query: 457 YDACALYGA 465
            +A AL  A
Sbjct: 428 AEAMALLKA 436



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 176/378 (46%), Gaps = 7/378 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P        +D + K   + E  ++F  +   G +  +  +N L+ AL  L E +     
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            +E     + P+  +F+ ++   C +    EA  V+D M   G  PNV T+T L++  C 
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL 318

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              + EA++V D M   GC PN+ +YN L+ G C + R+++A  +   +    L PD  T
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 378

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y+ ++ G C V R  +A+ L +E +     PN+VT+  L +  CK     + + LLK ++
Sbjct: 379 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 438

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
             N  PD    +  ++G+ + G++  A  +F  +   G + D    + ++ GLC      
Sbjct: 439 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLC-----R 493

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           + LL++A ++F +M +     +   Y  + R   +  +T  A+  L   +  G      T
Sbjct: 494 RGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 553

Query: 408 FNNVIQALCGEGKIDKAL 425
               ++ L  +G +D++L
Sbjct: 554 MTLFVKMLSDDG-LDQSL 570



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 173/359 (48%), Gaps = 5/359 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +FD +  +G    V  +  L+  L  +     A++           PN + ++ 
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G  P++ T+  L+++LC     K    +L++M    
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ ++N ++  LC  G+V EA++++  +   G++P+V TYTA+MDG C +   +EA+
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +  + +G  PNV+++NTL NGYCK     K + L   M ++  +PD ++YSTL++GL
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 386

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
               +++ A+++F EMV      +      LL  LC   +     L +A  + + +    
Sbjct: 387 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRY-----LAEAMALLKAIEGSN 441

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              D     I I  + +  + + A     +    G  P   T++ +I  LC  G +D+A
Sbjct: 442 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 500



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 128/260 (49%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E + +FD++   G   +V  +N L+     +   + A+  F E     L P++ T+
Sbjct: 320 SEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTY 379

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           S +I   C+     +A  +   M      PN+ T+ IL++ LCK+  L EA+ +L  +  
Sbjct: 380 STLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEG 439

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P+IQ  N  + G+C  G +E A ++  N+ + GL+PDV+TY+ +++G C+ G  +E
Sbjct: 440 SNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDE 499

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A +L  E  E G T N   +NT+  G+ +     + + LL+ M  R    D  + +  + 
Sbjct: 500 ASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVK 559

Query: 304 GLLKWGKIRPAVSIFKEMVR 323
            L   G  +    I +E V+
Sbjct: 560 MLSDDGLDQSLKQILREFVQ 579


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 197/416 (47%), Gaps = 41/416 (9%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  ++F  +   G +  +S FN LL  L    + +   K   +    G+ PN +T+++ I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           +  C + +   A +++ C+ + G  P+V T+  L+  LCK+ + +EA   L +M   G +
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TYN L+ G C  G V+ A  ++ +   +G  PD +TY +++DG C  G +N A+ L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378

Query: 248 LNEAIERGVTPNVV-----------------------------------TFNTLFNGYCK 272
            NEA+ +G+ PNV+                                   TFN L NG CK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G      GL+K+M  +   PD  +++ L++G     K+  A+ I   M+  G + D   
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            NSLL GLC  S       ED  + ++ M +K    +  T+ I++ +L + +K DEAL  
Sbjct: 499 YNSLLNGLCKTSK-----FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT-SYDMLI 447
           L         P  +TF  +I   C  G +D A  L   M E  K+ S T +Y+++I
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 180/351 (51%), Gaps = 4/351 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+  L    E   A+  F+EA   G+ PN   ++ +I+   N+    EA ++ + M 
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  P V TF ILVN LCK G + +A  ++  M   G  P+I T+N L+ G     ++E
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A E+L  + ++G+ PDVYTY ++++G CK  +  + ME     +E+G  PN+ TFN L 
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              C+     + +GLL+ MK ++  PD +++ TL++G  K G +  A ++F++M    ++
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE-AYK 597

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           V     ++    + + ++ EK  +  A ++F++M  +    D  TY +++    K    +
Sbjct: 598 VSS---STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVN 654

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
                L   +E G IP   T   VI  LC E ++ +A  ++  M +   +P
Sbjct: 655 LGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 220/497 (44%), Gaps = 51/497 (10%)

Query: 23  IPQFNKL--VVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIK--- 77
           +  FNKL  V+     +   E L  K   R +    F   +    L +R ++  +++   
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275

Query: 78  ---KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
              + G    V  +N+L+  L   ++ + A  +  +  + GL P+S+T++ +I  YC   
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
               A +++     NG+ P+  T+  L++ LC  G    AL + ++    G KPN+  YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG--------------- 239
            L+KGL   G + EA ++   +   GL P+V T+  +++G CK+G               
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455

Query: 240 --------------------RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
                               +   A+E+L+  ++ GV P+V T+N+L NG CK       
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           +   K M ++ C P+  +++ LL  L ++ K+  A+ + +EM       D     +L+ G
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTK--KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            C     +   L+ AY +F KM +  KVS + P TY I+I    +      A       +
Sbjct: 576 FC-----KNGDLDGAYTLFRKMEEAYKVSSSTP-TYNIIIHAFTEKLNVTMAEKLFQEMV 629

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
           +    P   T+  ++   C  G ++     L  M E+  IPS T+   +I  L   ++ Y
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689

Query: 458 DACALYGAALKQGVIPQ 474
           +A  +    +++G++P+
Sbjct: 690 EAAGIIHRMVQKGLVPE 706



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 198/442 (44%), Gaps = 30/442 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   ++E +++F+ +       +V  +N ++  LV     + A K +      G+ P+ +
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F+I ++ +C  +    A ++++ M   G   NV  +  +V    +     E  E+  +M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G    + T+N LL+ LC  G V+E  ++L  V   G+ P+++TY   + G C+ G  
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ ++   IE+G  P+V+T+N L  G CK     +    L  M      PD  +Y+TL
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-------------------- 341
           + G  K G ++ A  I  + V  GF  D+    SL+ GLC                    
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 342 ----------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
                     +K    + ++ +A Q+  +M++K  + +  T+ I++  L K     +A  
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            +   I  G+ P   TFN +I     + K++ AL +L +M ++   P   +Y+ L+  L 
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           +  K  D    Y   +++G  P
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAP 529



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 153/343 (44%), Gaps = 40/343 (11%)

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           + G+++EA+ V ++M    C+P + +YN ++  L   G  ++A+++ M +++ G+ PDVY
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV------------------------- 261
           ++T  M  FCK  R + A+ LLN    +G   NVV                         
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207

Query: 262 ----------TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
                     TFN L    CK+G   +   LL  + KR  LP+  +Y+  + GL + G++
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             AV +   ++  G + D    N+L+ GLC  S       ++A     KM  +    D  
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK-----FQEAEVYLGKMVNEGLEPDSY 322

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I    KG     A   +  A+  G +P   T+ ++I  LC EG+ ++AL L    
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
                 P+   Y+ LI  L       +A  L     ++G+IP+
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 111/233 (47%), Gaps = 1/233 (0%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++  ++I D +  +G +  V  +N LL  L   ++ E  ++ +      G APN +TF+I
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI- 184
           ++   C      EA  +++ M +   +P+  TF  L++  CK+G L  A  +  +M    
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
               +  TYN ++        V  A ++   + +  L PD YTY  ++DGFCK G  N  
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            + L E +E G  P++ T   + N  C E    +  G++  M ++  +P+ ++
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 115/246 (46%), Gaps = 8/246 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S  ++ ++ + ++ + G   ++  FN LL +L    + + A+    E  +  + P++ 
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGY--HPNVTTFTILVNSLCKSGRLKEALEVLD 179
           TF  +I  +C   D   A  +   M +  Y    +  T+ I++++  +   +  A ++  
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKM-EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQ 626

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M      P+  TY  ++ G C  G V   Y+ L+ +  +G  P + T   V++  C   
Sbjct: 627 EMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVED 686

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R  EA  +++  +++G+ P  V  NT+ +   KE    K V  L+ + K++C+    +Y 
Sbjct: 687 RVYEAAGIIHRMVQKGLVPEAV--NTICDVDKKEVAAPKLV--LEDLLKKSCIT-YYAYE 741

Query: 300 TLLNGL 305
            L +GL
Sbjct: 742 LLFDGL 747


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 213/471 (45%), Gaps = 72/471 (15%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D +  I ++G   ++  +N ++ AL        A    ++    G+ P+++T++ MI  
Sbjct: 213 MDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILG 272

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC   D   A ++ + M + G  PN  T++ L+N LC SGR+ EAL+ + +M R G  P 
Sbjct: 273 YCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPT 332

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVK-------------------------------- 217
           + T+   +  LC +GR+E+A+++ +++K                                
Sbjct: 333 VHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMS 392

Query: 218 NDGLKPDVYTYTAVMD-----------------------------------GFCKVGRSN 242
            DG+ P+  TY A+M+                                   G+C +G + 
Sbjct: 393 RDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTE 452

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +AM +L   ++   TP +VT+N +  GYC  G     + +L+LMK   C PD+ SY+ L+
Sbjct: 453 KAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELI 512

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +G  K  K+  A  +F EM+  G   +E    +L+ G C     + + L+ A ++ E+M 
Sbjct: 513 SGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYC-----KDEKLDCAARMLERMK 567

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +     +  TY ++I  L K      A       +E    P  +T++ VI  LC  G I 
Sbjct: 568 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIP 627

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            AL +   M +H  +P+  +Y  LI  L Q  +  +A  ++    KQG+IP
Sbjct: 628 LALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIP 678



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 198/436 (45%), Gaps = 43/436 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E +D    + + G   +V  F   ++AL  +   E A K F +    G  PN +T++ 
Sbjct: 314 VNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTS 373

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I     +     A  +   M  +G  PN  T+  L+N L ++  +  AL V + MG+ G
Sbjct: 374 LIS---GQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHG 430

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV----------------------------- 216
           C PN  +YN L++G C +G  E+A  ML N+                             
Sbjct: 431 CLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAI 490

Query: 217 ------KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
                 K +G +PD ++YT ++ GFCK+ +   A  + NE ++RG+ PN VT+  L +GY
Sbjct: 491 RVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGY 550

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK+        +L+ MK+  C P+  +Y+ L++GL K      A  + K M+      D 
Sbjct: 551 CKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDV 610

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              ++++ GLC         +  A ++F KM K   + +  TY  +I+ LG+  + +EA 
Sbjct: 611 VTYSTVINGLC-----NNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAE 665

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                  + G IP  +T+  +I+     GK+D+A   L  M      P+  +YD+LI  L
Sbjct: 666 EMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725

Query: 451 DQLEKSYDACALYGAA 466
                 +   AL  AA
Sbjct: 726 QNEMVYHKLVALPNAA 741



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 199/429 (46%), Gaps = 16/429 (3%)

Query: 31  VFAAASLSTAESLDLKENPRSLQAQRFVDRIKA----SPLKERIDIFDSIKKDGTNWSVS 86
            FA  ++   ES D    P ++   R +  IK+    + + + ++  D   + G    + 
Sbjct: 139 TFAKVAMRLLESRD---RPAAVGRAR-IHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLF 194

Query: 87  DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
            +  LL+ L  LN   T +  + +    GL PN   ++ +I   C   +  +A  +I+ +
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
           F +G  P+  T+T ++   C++  L  A E+ ++M   GC+PN  TY+ L+ GLC  GRV
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            EA + +  +   G+ P V+T+TA +   C +GR  +A ++  +  ++G  PNV T+ +L
Sbjct: 315 NEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL 374

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G   +      +GL   M +   +P+ ++Y+ L+N L++  +I  A+ +F  M + G 
Sbjct: 375 ISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGC 431

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             +    N L+RG C     EK     A  +   M K        TY I+I+       T
Sbjct: 432 LPNTSSYNELIRGYCTIGDTEK-----AMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDT 486

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D A+  L      G  P   ++  +I   C   K++ A  +   M +    P+  +Y  L
Sbjct: 487 DVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTAL 546

Query: 447 ITKLDQLEK 455
           I+   + EK
Sbjct: 547 ISGYCKDEK 555



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 92/417 (22%), Positives = 159/417 (38%), Gaps = 97/417 (23%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I + + +K +G       + +L+     +++ E A   F+E    GL PN  T++ +I  
Sbjct: 490 IRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISG 549

Query: 130 YCN-----------------------------------KNDFFEARKVIDCMFDNGYHPN 154
           YC                                    +N+F  A ++   M +    P+
Sbjct: 550 YCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPD 609

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
           V T++ ++N LC +G +  ALE+ ++M + GC PN+ TY+ L++ L   GRVEEA EM  
Sbjct: 610 VVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFS 669

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME-----------------------LLNEA 251
            +K  GL PD  TY  +++     G+ + A +                       L NE 
Sbjct: 670 ELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEM 729

Query: 252 IERGVT--PNVVT--------------------------------FNTLFNGYCKEGTPM 277
           +   +   PN  +                                ++ L +   + G   
Sbjct: 730 VYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWF 789

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   L + M  ++  P++ +Y   L  LL+  K+  A+ +FK M     E+       L+
Sbjct: 790 EANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELI 849

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
             LC          ++A  VFEKM  +    D   + I+I  L      D  +  LH
Sbjct: 850 CTLCQLHRR-----KEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLH 901



 Score = 42.4 bits (98), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 44/231 (19%), Positives = 90/231 (38%), Gaps = 22/231 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E  ++F  +KK G       +  ++   VM  + + A  F  E  + G  P   T+ +
Sbjct: 661 VEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDV 720

Query: 126 MIRCYCNK------------------NDFFEARKVIDCMFDN----GYHPNVTTFTILVN 163
           +I+   N+                  +D    + VI  +        +  +   +  L++
Sbjct: 721 LIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLS 780

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            L +SGR  EA  +   M      PN  TY   L  L    +V+ A ++  ++ +   + 
Sbjct: 781 RLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCEL 840

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +  Y  ++   C++ R  EA  +  + + R +  + + +  L NG    G
Sbjct: 841 HLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAG 891


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 204/416 (49%), Gaps = 17/416 (4%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  ++F+ +K  G    V  +  L+    +  + E A   F+E    G+ P+  T S++I
Sbjct: 476 EARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 535

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C K    EA K+++ +   G   +V T T LV  LC   R+ +A ++  +M ++GC 
Sbjct: 536 DMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCM 595

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND------GLKPDVYTYTAVMDGFCKVGRS 241
           PN+ T   L+KGLC  G ++ A E+  N+ +D        KP+  +Y+ ++DG CK GR 
Sbjct: 596 PNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRE 655

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA EL  E    GV P+V+++ +L +G+C+ G       L   M      PD  ++S L
Sbjct: 656 DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVL 715

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K GK+  A  + + M++ G   +     +L++GLCM      D + +A Q+F KM
Sbjct: 716 IDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMN-----DRISEATQLFMKM 770

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEAL-IHLHHAIEMGHI-----PRTITFNNVIQAL 415
            K   + D  TYG +++ L +      AL +H     + G       P  I+++ +I  L
Sbjct: 771 QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGL 830

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           C  G+ D+A  L   M     IP+  SY  LI    +  K  DA  L+   + QGV
Sbjct: 831 CKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGV 886



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 190/380 (50%), Gaps = 27/380 (7%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI---------LVNSL 165
           GL P+S+TF+I+I C CN     E    +  +   GY P++ T++I         L++ L
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK G++ EA E+L+ M + GC  +I TY+ L+KGLC   R+ EA  + M+++  G +PD 
Sbjct: 65  CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124

Query: 226 YTYTAVMDGFCKVGRSNEAM----ELLNEAIERGV--TPNVVTFNTLFNGYCKEGTPMKG 279
            TY  +M G C+ G  N A+    E+LN+    G+   P +++++ + +G CK+    + 
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             L K MK +  +PD ISY++L++G    GK   A  +F EM+  G + D      L+  
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
            C    +E  ++E A ++ E M  +  + D  TY  +I+ L    +  EA        ++
Sbjct: 245 FC----KEGKVIE-ANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL 299

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI-------PSRTSYDMLITKLDQ 452
           G  P  I +  +++ LC  GKI+ AL L   M             P  T+  MLI  L +
Sbjct: 300 GCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCK 359

Query: 453 LEKSYDACALYGAALKQGVI 472
             K  +A  L    +++G I
Sbjct: 360 EGKVIEANELLEVMIQRGCI 379



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 180/393 (45%), Gaps = 51/393 (12%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
           +  +  +Y + P+  T S++I   C +    EA ++++ M   G   ++ T++ L+  LC
Sbjct: 41  YIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 100

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG---------------------- 204
              R+ EA  +   M ++GC+P+  TY  L+KGLC  G                      
Sbjct: 101 MEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIK 160

Query: 205 -------------------RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
                              R +EA E+   +K  G+ PDV +YT+++ GFC  G+  +A 
Sbjct: 161 CKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAK 220

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L NE ++ G+ P+V T   L + +CKEG  ++   LL++M  R C+ D ++YSTL+ GL
Sbjct: 221 CLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGL 280

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS------WEEKDLLEDAYQVFE 359
               +I  A  +F  M + G   D     +L++GLC            +++L D  Q   
Sbjct: 281 CMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGI 340

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           K  +     D  T  ++I  L K  K  EA   L   I+ G I   +T++ +I+ LC E 
Sbjct: 341 KCIRP----DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEH 396

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           +I +A  L   M +    P   +Y  L+  L Q
Sbjct: 397 RISEATWLFMSMQKLGCRPDAITYGTLMKGLCQ 429



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 153/271 (56%), Gaps = 6/271 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ ++  L     ++ A + F E  + G+ P+  +++ +I  +C    + +A+ + + M 
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 701

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  P+VTTF++L++ LCK G++ EA E+L+ M + GC PN  TY  L+KGLC   R+ 
Sbjct: 702 DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRIS 761

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL----LNEAIERGVT--PNVV 261
           EA ++ M ++  G  PDV TY  +M G C+ G    A+EL    L++  + G    P+V+
Sbjct: 762 EATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVI 821

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           +++ + +G CK G   +   L K MK    +P+ ISY++L++G  + GK+  A  +F EM
Sbjct: 822 SYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEM 881

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           V  G +++    + ++ G C +   +K L +
Sbjct: 882 VDQGVQLNAVTYSVMIHGFCKEGQIDKALFQ 912



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 208/431 (48%), Gaps = 24/431 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  ++ + + + G    +  ++ L+  L M +    A   F      G  P++ 
Sbjct: 66  KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAI 125

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMF-DNGYH-----PNVTTFTILVNSLCKSGRLKEAL 175
           T+  +++  C   +   A ++   M  D G +     P + +++I+++ LCK  R  EA 
Sbjct: 126 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 185

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           E+  +M   G  P++ +Y  L+ G C+ G+ E+A  +   + + G++PDV T   ++D F
Sbjct: 186 ELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMF 245

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK G+  EA ELL   + RG   ++VT++TL  G C +    +   L   MKK  C PD 
Sbjct: 246 CKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDA 305

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMV----RFGFEV---DERMMNSLLRGLCMKSWEEK 348
           I+Y TL+ GL + GKI  A+ + +EM+    ++G +    D    + L+  LC    +E 
Sbjct: 306 IAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILC----KEG 361

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
            ++E A ++ E M ++  + D  TY  +I+ L    +  EA        ++G  P  IT+
Sbjct: 362 KVIE-ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 409 NNVIQALCGEGKIDKALLLLFLM------YEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
             +++ LC  G I+ AL L   M      Y     P+  SY ++I  L +  +  +A  L
Sbjct: 421 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 480

Query: 463 YGAALKQGVIP 473
           +     QG++P
Sbjct: 481 FEEMKAQGIMP 491



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 206/424 (48%), Gaps = 17/424 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  ++ + + + G    +  ++ L+  L M +    A   F      G  P++ 
Sbjct: 359 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAI 418

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMF-DNGYH-----PNVTTFTILVNSLCKSGRLKEAL 175
           T+  +++  C   +   A ++   M  D G +     P + +++I+++ LCK  R  EA 
Sbjct: 419 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 478

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           E+ ++M   G  P++ +Y  L+ G C  G+ E+A  +   + + G++PDV T + ++D  
Sbjct: 479 ELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML 538

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK G+  EA +LL   I+RG   +VVT  TL  G C +    K   L   M+K  C+P+ 
Sbjct: 539 CKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNV 598

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVR----FGFEVDERMMNS--LLRGLCMKSWEEKD 349
           ++ +TL+ GL + G I+ A+ + K M+     +G       ++   ++ GLC    E   
Sbjct: 599 VTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRE--- 655

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
             ++A ++F++M     + D  +Y  +I    +  K  +A    +  +++G  P   TF+
Sbjct: 656 --DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 713

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I  LC EGK+ +A  LL +M +   IP+  +Y  L+  L   ++  +A  L+    K 
Sbjct: 714 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 773

Query: 470 GVIP 473
           G +P
Sbjct: 774 GCLP 777



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 192/409 (46%), Gaps = 23/409 (5%)

Query: 61  IKASPLKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE----AS 112
           IK   ++ RI     +F S++K G       +  L+  L        A++   E      
Sbjct: 389 IKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 448

Query: 113 SYGLA--PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR 170
            YG+   P   ++SI+I   C      EAR++ + M   G  P+V ++T L++  C SG+
Sbjct: 449 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGK 508

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
            ++A  + ++M  +G +P++ T + L+  LC  G+V EA ++L  V   G   DV T T 
Sbjct: 509 WEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTT 568

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR- 289
           ++ G C   R ++A +L  +  + G  PNVVT  TL  G C+ G     + L K M    
Sbjct: 569 LVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDT 628

Query: 290 -----NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
                NC P+ ISYS +++GL K G+   A  +FKEM   G   D     SL+ G C   
Sbjct: 629 SPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSG 688

Query: 345 -WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
            W+      DA  +F +M       D  T+ ++I  L K  K  EA   L   I+ G IP
Sbjct: 689 KWK------DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 742

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            T+T+  +++ LC   +I +A  L   M +   +P   +Y  L+  L Q
Sbjct: 743 NTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 791



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 20/203 (9%)

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF---------EVDERMMNSL 336
           M+     PD  +++ L+N L    ++   ++    ++R G+           D    + L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +  LC    +E  ++E A ++ E M ++  + D  TY  +I+ L    +  EA       
Sbjct: 61  IDILC----KEGKVIE-ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSM 115

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM------YEHAKIPSRTSYDMLITKL 450
            ++G  P  IT+  +++ LC  G I+ AL L   M      Y     P+  SY ++I  L
Sbjct: 116 QKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGL 175

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +  +  +A  L+     QG++P
Sbjct: 176 CKDRREDEARELFKEMKAQGMMP 198


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 194/385 (50%), Gaps = 7/385 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + +   + +   +  +  +N L+  L    + + AV    E  + G  PNS T + ++
Sbjct: 16  EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM 75

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C      EA ++++ M   G+  +V  +  L++  C +G L    E+ D+M   G  
Sbjct: 76  DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 135

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            N+ TY+CL+ GLC +G+ +EA  +L  +   G+ PDV TYT ++DG CK GR+  AM+L
Sbjct: 136 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 195

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           LN  +E+G  P+ VT+N L +G CKEG  +    +L++M ++    D ++Y+TL+ GL  
Sbjct: 196 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 255

Query: 308 WGKIRPAVSIFKEMV--RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            GK+  A+ +F  M       E +    N L+ GLC     ++  L  A ++  KM KK 
Sbjct: 256 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLC-----KEGRLTKAVKIHRKMVKKG 310

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           S  +  TY +++    K  K  EA+      +++G +P + T++ +I   C    ++ A 
Sbjct: 311 SCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAK 370

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL 450
            L   M  H   P+   Y+ L+  L
Sbjct: 371 GLFCEMRTHGLNPALFDYNTLMASL 395



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 215/463 (46%), Gaps = 37/463 (7%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+     +D + K   + E +++ +++KK G +  V  +  L+         +   + 
Sbjct: 66  PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKEL 125

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F E    G++ N  T+S ++   C    + EA  V++ M ++G HP+V T+T L++ LCK
Sbjct: 126 FDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCK 185

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            GR   A+++L+ M   G +P+  TYN LL GLC  G V +A+++L  +   G K DV T
Sbjct: 186 DGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVT 245

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAI--ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           Y  +M G C  G+ +EA++L N     E  + PNV TFN L  G CKEG   K V + + 
Sbjct: 246 YNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRK 305

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC---- 341
           M K+    + ++Y+ LL G LK GKI+ A+ ++K+++  GF  +    + L+ G C    
Sbjct: 306 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 365

Query: 342 --------------------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
                                     M S  ++  LE A  +F++M       D  ++  
Sbjct: 366 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 425

Query: 376 VIRTLGKGKKTDEALIH--LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
           +I   G  K  D   +       +EMG  P  +TF+ +I  L   G++D+A   L  M  
Sbjct: 426 MID--GTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVA 483

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
               P    YD L+  L     + +   L      +G +  RK
Sbjct: 484 SGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRK 526



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 181/353 (51%), Gaps = 7/353 (1%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
            +I+++  C     FEA  +I  M      P++ ++  L+N LCK+ +LKEA+ +L +M 
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             GC PN  T   L+ GLC  GR++EA E+L  +K  G   DV  Y  ++ GFC  G  +
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
              EL +E + +G++ NVVT++ L +G C+ G   +   +L  M +    PD ++Y+ L+
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +GL K G+   A+ +   MV  G E      N LL GLC     ++ L+ DA+++   M 
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC-----KEGLVIDAFKILRMMI 235

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI--PRTITFNNVIQALCGEGK 420
           +K    D  TY  +++ L    K DEAL   +   +  +   P   TFN +I  LC EG+
Sbjct: 236 EKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGR 295

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + KA+ +   M +     +  +Y+ML+    +  K  +A  L+   L  G +P
Sbjct: 296 LTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVP 348



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 181/385 (47%), Gaps = 7/385 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D+ + + + G   S   +N LL  L        A K        G   +  T++ +++ 
Sbjct: 193 MDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKG 252

Query: 130 YCNKNDFFEARKVIDCMFDNG--YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
            C+K    EA K+ + MFDN     PNV TF +L+  LCK GRL +A+++  +M + G  
Sbjct: 253 LCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSC 312

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            N+ TYN LL G    G+++EA E+   V + G  P+ +TY+ ++DGFCK+   N A  L
Sbjct: 313 GNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGL 372

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E    G+ P +  +NTL    CKEG+  +   L + M   NC PD IS++T+++G LK
Sbjct: 373 FCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLK 432

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G  +    +  +MV  G   D    ++L+  L  K  E    L++A    E+M      
Sbjct: 433 AGDFQFVKELQMKMVEMGLRPDALTFSTLINRLS-KLGE----LDEAKSALERMVASGFT 487

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D   Y  +++ L     T E +  LH     G +      + ++  LC   +    + L
Sbjct: 488 PDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMEL 547

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQ 452
           L   ++     +  S + L+ +L Q
Sbjct: 548 LPTFFQGTSEGASISCNELLMQLHQ 572



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 123/244 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L + + I   + K G+  ++  +N LL   +   + + A++ + +    G  PNS+
Sbjct: 292 KEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF 351

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+I  +C       A+ +   M  +G +P +  +  L+ SLCK G L++A  +  +M
Sbjct: 352 TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 411

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           G   C+P+I ++N ++ G    G  +   E+ M +   GL+PD  T++ +++   K+G  
Sbjct: 412 GNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGEL 471

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA   L   +  G TP+ + +++L  G   +G   + + LL  M  +  + D+   ST+
Sbjct: 472 DEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTI 531

Query: 302 LNGL 305
           L  L
Sbjct: 532 LTCL 535



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 100/214 (46%), Gaps = 6/214 (2%)

Query: 61  IKASPLKERIDIFDSIKKDG---TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA 117
           +KA  +KE ++++  +   G    +++ S   D    + MLN    A   F E  ++GL 
Sbjct: 326 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLN---IAKGLFCEMRTHGLN 382

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P  + ++ ++   C +    +A+ +   M +    P++ +F  +++   K+G  +   E+
Sbjct: 383 PALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL 442

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
             +M  +G +P+  T++ L+  L  +G ++EA   L  +   G  PD   Y +++ G   
Sbjct: 443 QMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSS 502

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
            G + E + LL++   +G   +    +T+    C
Sbjct: 503 KGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 536



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/209 (21%), Positives = 77/209 (36%), Gaps = 36/209 (17%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           + LDL   P S      +D   K   L     +F  ++  G N ++ D+N L+ +L    
Sbjct: 340 QVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 399

Query: 100 EQETAVKFFSEASS-----------------------------------YGLAPNSWTFS 124
             E A   F E  +                                    GL P++ TFS
Sbjct: 400 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 459

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +I       +  EA+  ++ M  +G+ P+   +  L+  L   G   E + +L QM   
Sbjct: 460 TLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 519

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           G   + +  + +L  LC+  +  +  E+L
Sbjct: 520 GTVLDRKIVSTILTCLCHSIQEVDVMELL 548


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 198/389 (50%), Gaps = 5/389 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  + +   + +V  +N L+         + A+  F +  + G  PN  T++ +I  Y
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +  K++  M   G  PN+ ++ +++N LC+ GR+KE   VL +M R G   + 
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L+KG C  G   +A  M   +   GL P V TYT+++   CK G  N AME L++
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
              RG+ PN  T+ TL +G+ ++G   +   +L+ M      P  ++Y+ L+NG    GK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A+++ ++M   G   D    +++L G C +S++    +++A +V  +M +K    D 
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC-RSYD----VDEALRVKREMVEKGIKPDT 485

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I+   + ++T EA       + +G  P   T+  +I A C EG ++KAL L   
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           M E   +P   +Y +LI  L++  ++ +A
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREA 574



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 200/383 (52%), Gaps = 26/383 (6%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            +E +  G + +  T++ +I+ YC + +F +A  +   M  +G  P+V T+T L++S+CK
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G +  A+E LDQM   G  PN +TY  L+ G    G + EAY +L  + ++G  P V T
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y A+++G C  G+  +A+ +L +  E+G++P+VV+++T+ +G+C+     + + + + M 
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           ++   PD I+YS+L+ G  +  + + A  +++EM+R G   DE    +L+   CM    E
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM----E 533

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
            D LE A Q+  +M +K  + D  TY ++I  L K  +T EA   L        +P  +T
Sbjct: 534 GD-LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592

Query: 408 FNNVIQ---------------ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TK 449
           ++ +I+                 C +G + +A  +   M      P  T+Y+++I    +
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652

Query: 450 LDQLEKSYDACALYGAALKQGVI 472
              + K+Y    LY   +K G +
Sbjct: 653 AGDIRKAY---TLYKEMVKSGFL 672



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 182/361 (50%), Gaps = 20/361 (5%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           + G   SV  +  L+ ++        A++F  +    GL PN  T++ ++  +  K    
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA +V+  M DNG+ P+V T+  L+N  C +G++++A+ VL+ M   G  P++ +Y+ +L
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G C    V+EA  +   +   G+KPD  TY++++ GFC+  R+ EA +L  E +  G+ 
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR----- 312
           P+  T+  L N YC EG   K + L   M ++  LPD ++YS L+NGL K  + R     
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577

Query: 313 ----------PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
                     P+   +  ++     ++ + + SL++G CMK      ++ +A QVFE M 
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG-----MMTEADQVFESML 632

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            K    D   Y I+I    +     +A       ++ G +  T+T   +++AL  EGK++
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692

Query: 423 K 423
           +
Sbjct: 693 E 693



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 192/385 (49%), Gaps = 5/385 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +FD ++  G   +V  +N L+     L + +   K     +  GL PN  +++++I  
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C +    E   V+  M   GY  +  T+  L+   CK G   +AL +  +M R G  P+
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY  L+  +C  G +  A E L  ++  GL P+  TYT ++DGF + G  NEA  +L 
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E  + G +P+VVT+N L NG+C  G     + +L+ MK++   PD +SYST+L+G  +  
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +  A+ + +EMV  G + D    +SL++G C     E+   ++A  ++E+M +     D
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFC-----EQRRTKEACDLYEEMLRVGLPPD 519

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  +I         ++AL   +  +E G +P  +T++ +I  L  + +  +A  LL 
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLE 454
            ++    +PS  +Y  LI     +E
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIE 604



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 185/373 (49%), Gaps = 11/373 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F E     ++PN +T++I+IR +C   +   A  + D M   G  PNV T+  L++
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             CK  ++ +  ++L  M   G +PN+ +YN ++ GLC  GR++E   +L  +   G   
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D  TY  ++ G+CK G  ++A+ +  E +  G+TP+V+T+ +L +  CK G   + +  L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M+ R   P++ +Y+TL++G  + G +  A  + +EM   GF       N+L+ G C+ 
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                  +EDA  V E M +K    D  +Y  V+    +    DEAL      +E G  P
Sbjct: 429 GK-----MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKSYDAC 460
            TIT++++IQ  C + +  +A  L   M      P   +Y  LI        LEK   A 
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK---AL 540

Query: 461 ALYGAALKQGVIP 473
            L+   +++GV+P
Sbjct: 541 QLHNEMVEKGVLP 553



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 175/391 (44%), Gaps = 59/391 (15%)

Query: 9   SFIFTNTNRRNHN-KIPQFNKLVV-------FAAASLSTAESLDLKENPRSLQAQRFVDR 60
           SF+ T  NRR ++     +N L+        F  A +  AE L     P  +     +  
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354

Query: 61  I-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           + KA  +   ++  D ++  G   +   +  L+           A +   E +  G +P+
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             T++ +I  +C      +A  V++ M + G  P+V +++ +++  C+S  + EAL V  
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M   G KP+  TY+ L++G C   R +EA ++   +   GL PD +TYTA+++ +C  G
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNG------------------------------ 269
              +A++L NE +E+GV P+VVT++ L NG                              
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 594

Query: 270 --------------------YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
                               +C +G   +   + + M  +N  PD  +Y+ +++G  + G
Sbjct: 595 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            IR A +++KEMV+ GF +    + +L++ L
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 6/268 (2%)

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS-NEA 244
           C      ++ ++K    +  +++A  ++   +  G  P V +Y AV+D   +  R+ + A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             +  E +E  V+PNV T+N L  G+C  G     + L   M+ + CLP+ ++Y+TL++G
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             K  KI     + + M   G E +    N ++ GLC +       +++   V  +M ++
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR-----MKEVSFVLTEMNRR 304

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY  +I+   K     +AL+     +  G  P  IT+ ++I ++C  G +++A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           +  L  M      P+  +Y  L+    Q
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQ 392



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 130/308 (42%), Gaps = 50/308 (16%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   +   +  +G + SV  +N L+    +  + E A+    +    GL+P+  ++S 
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  +C   D  EA +V   M + G  P+  T++ L+   C+  R KEA ++ ++M R+G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY  L+   C  G +E+A ++   +   G+ PDV TY+ +++G  K  R+ EA 
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575

Query: 246 ELL-----NEAIERGVT------------------------------------------- 257
            LL      E++   VT                                           
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635

Query: 258 --PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             P+   +N + +G+C+ G   K   L K M K   L   ++   L+  L K GK+    
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695

Query: 316 SIFKEMVR 323
           S+   ++R
Sbjct: 696 SVIVHVLR 703



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/137 (21%), Positives = 67/137 (48%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+ +C K    EA +V + M    + P+ T + I+++  C++G +++A  +  +M + G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              +  T   L+K L   G+V E   ++++V       +      +++   + G  +  +
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730

Query: 246 ELLNEAIERGVTPNVVT 262
           ++L E  + G  PN ++
Sbjct: 731 DVLAEMAKDGFLPNGIS 747


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 188/374 (50%), Gaps = 6/374 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A +   +A   G  P+ +T+  +I  +C   D   A  V       G  P++  +  L
Sbjct: 312 QDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTL 371

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +  L + G +  AL+++++M   GC PNI TYN ++ GLC +G V +A  ++ +    G 
Sbjct: 372 IKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGC 431

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PD++TY  ++DG+CK  + + A E++N    +G+TP+V+T+NTL NG CK G   + + 
Sbjct: 432 PPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVME 491

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           + K M+++ C P+ I+Y+ +++ L K  K+  AV +  EM   G + D     +L  G C
Sbjct: 492 IFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFC 551

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTD-PGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
                +   ++ AYQ+F +M K+  V     TY I++    +    + A+         G
Sbjct: 552 -----KIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSG 606

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
             P   T+  VI   C  G I +    L    E   IPS T++  ++  L   +K ++A 
Sbjct: 607 CDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAV 666

Query: 461 ALYGAALKQGVIPQ 474
            +    L++G++P+
Sbjct: 667 GIIHLMLQKGIVPE 680



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 208/456 (45%), Gaps = 49/456 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   ++E +D F+ +     + SV   N ++  LV       A K +      G+  + +
Sbjct: 88  RKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVY 147

Query: 122 TFSIMIRCYCNKNDFFEARK-------------------VIDCMFDNGYH---------- 152
           T++I I+ +C     + A +                   V+  ++D+G H          
Sbjct: 148 TYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEM 207

Query: 153 ------PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG-- 204
                 P+V  F  LV+ LCK G + E+  +L ++ + G  PN+ T+N  ++GLC  G  
Sbjct: 208 LARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGAL 267

Query: 205 -------RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
                  RV EA E L  + N G +PD  TY +++DG+CK G   +A  +L +A+ +G  
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFK 327

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+  T+ +L NG+CK+G P + + + K    +   P  + Y+TL+ GL + G I PA+ +
Sbjct: 328 PDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             EM   G   +    N ++ GLC     +   + DA  + +    K    D  TY  +I
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLC-----KMGCVSDASHLVDDAIAKGCPPDIFTYNTLI 442

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               K  K D A   ++     G  P  IT+N ++  LC  GK ++ + +   M E    
Sbjct: 443 DGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCT 502

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P+  +Y++++  L + +K  +A  L G    +G+ P
Sbjct: 503 PNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKP 538



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 221/511 (43%), Gaps = 54/511 (10%)

Query: 12  FTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKER-- 69
           F N +   H+     N LV F   + +    + +++         +  RIK+     R  
Sbjct: 104 FYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPY 163

Query: 70  --IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
             + +  ++ + G + +   +  ++  L    E + A + F E  +  L P+   F+ ++
Sbjct: 164 AALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLV 223

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG---------RLKEALEVL 178
              C K   FE+ +++  +   G  PN+ TF I V  LC+ G         R+ EA E L
Sbjct: 224 HVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYL 283

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            +M   G +P+  TYN ++ G C  G V++A  +L +    G KPD +TY ++++GFCK 
Sbjct: 284 RKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKD 343

Query: 239 GRSNEAM-----------------------------------ELLNEAIERGVTPNVVTF 263
           G  + AM                                   +L+NE  E G  PN+ T+
Sbjct: 344 GDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTY 403

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N + NG CK G       L+     + C PD  +Y+TL++G  K  K+  A  +   M  
Sbjct: 404 NLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWS 463

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D    N+LL GLC K+ + ++++E    +F+ M +K    +  TY I++ +L K 
Sbjct: 464 QGMTPDVITYNTLLNGLC-KAGKSEEVME----IFKAMEEKGCTPNIITYNIIVDSLCKA 518

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT-S 442
           KK +EA+  L      G  P  ++F  +    C  G ID A  L   M +   +   T +
Sbjct: 519 KKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTAT 578

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           Y+++++   +      A  L+      G  P
Sbjct: 579 YNIIVSAFSEQLNMNMAMKLFSVMKNSGCDP 609



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 167/336 (49%), Gaps = 8/336 (2%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   S+  +N L+  L        A++  +E +  G  PN WT++++I   C      +A
Sbjct: 360 GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDA 419

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             ++D     G  P++ T+  L++  CK  +L  A E++++M   G  P++ TYN LL G
Sbjct: 420 SHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNG 479

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC  G+ EE  E+   ++  G  P++ TY  ++D  CK  + NEA++LL E   +G+ P+
Sbjct: 480 LCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           VV+F TLF G+CK G       L + M+K+ +      +Y+ +++   +   +  A+ +F
Sbjct: 540 VVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLF 599

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
             M   G + D      ++ G C    +  ++ +    + E M K+  +    T+G V+ 
Sbjct: 600 SVMKNSGCDPDNYTYRVVIDGFC----KMGNITQGYKFLLENMEKRF-IPSLTTFGRVLN 654

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            L    K  EA+  +H  ++ G +P T+  N + +A
Sbjct: 655 CLCVKDKVHEAVGIIHLMLQKGIVPETV--NTIFEA 688



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 145/296 (48%), Gaps = 6/296 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + + + ++G   ++  +N ++  L  +     A     +A + G  P+ +T++ +I  
Sbjct: 385 LQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDG 444

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC +     A ++++ M+  G  P+V T+  L+N LCK+G+ +E +E+   M   GC PN
Sbjct: 445 YCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPN 504

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           I TYN ++  LC   +V EA ++L  +K+ GLKPDV ++  +  GFCK+G  + A +L  
Sbjct: 505 IITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFR 564

Query: 250 EAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
              ++  V     T+N + + + ++      + L  +MK   C PD  +Y  +++G  K 
Sbjct: 565 RMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKM 624

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           G I        E +   F         +L  LC+     KD + +A  +   M +K
Sbjct: 625 GNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCV-----KDKVHEAVGIIHLMLQK 675



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 186/412 (45%), Gaps = 50/412 (12%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT-TFTILVNSL 165
           F S  S  G    + T+  +++   +  +F E  K++  M +N  +  +   +   + + 
Sbjct: 27  FNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKNY 86

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
            + G+++EA++  ++M    C P++ ++N ++  L   G   +A+++ M +++ G++ DV
Sbjct: 87  GRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDV 146

Query: 226 YTYTAVMDGFCKVGR-----------------------------------SNEAMELLNE 250
           YTYT  +  FCK  R                                    + A EL +E
Sbjct: 147 YTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDE 206

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + R + P+VV FN L +  CK+G   +   LL  + KR   P+  +++  + GL + G 
Sbjct: 207 MLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGA 266

Query: 311 IRPAV---------SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  AV            ++MV  GFE D+   NS++ G C     +K +++DA +V +  
Sbjct: 267 LDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYC-----KKGMVQDANRVLKDA 321

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K    D  TY  +I    K    D A+      +  G  P  + +N +I+ L  +G I
Sbjct: 322 VFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLI 381

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             AL L+  M E+  +P+  +Y+++I  L ++    DA  L   A+ +G  P
Sbjct: 382 LPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPP 433



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 1/237 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L    ++ + +   G    V  +N LL  L    + E  ++ F      G  PN  
Sbjct: 447 KQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNII 506

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I++   C      EA  ++  M   G  P+V +F  L    CK G +  A ++  +M
Sbjct: 507 TYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566

Query: 182 GR-IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            +         TYN ++        +  A ++   +KN G  PD YTY  V+DGFCK+G 
Sbjct: 567 EKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGN 626

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             +  + L E +E+   P++ TF  + N  C +    + VG++ LM ++  +P+ ++
Sbjct: 627 ITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVN 683


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 197/408 (48%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   + +F+ + K+G   +   ++ L+  L        A     E   +G+ P + T + 
Sbjct: 436 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 495

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            I   C+   + +A ++   M + G  PNV T+T L++ LC SG LK A+ +  +M R G
Sbjct: 496 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 555

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TYN L+  L    R++ A+ +L  +  +GL  ++ TY  ++ G+C +G   +AM
Sbjct: 556 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            ++N  ++RG + N+VT+NT+  GYC  G     + +L LM+   C PD+ SY+ L+ G 
Sbjct: 616 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 675

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  K+  A  +F EMV  G   +E    +L+ G C     + + L+ A  + E M +  
Sbjct: 676 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC-----KDEKLDTATSLLEHMKRSG 730

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY ++I  L K      A       IE G  P  +T+  +I  LC  G    AL
Sbjct: 731 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 790

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   M E   +P+  +Y  LI  L Q  K  +A  L+    + G+IP
Sbjct: 791 EMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP 838



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 194/417 (46%), Gaps = 29/417 (6%)

Query: 67   KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
            K+ + + +++ + G + ++  +N ++          +A++        G  P+ W+++ +
Sbjct: 612  KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 671

Query: 127  IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
            I  +C  +    A  + + M D+G  PN  T+T L++  CK  +L  A  +L+ M R GC
Sbjct: 672  ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731

Query: 187  KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            +PN+QTYN L+ GL        A E+   +  +G+ P+V TYTA++DG CK G ++ A+E
Sbjct: 732  RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791

Query: 247  LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
            + N+ IE+G  PN++T+++L     +EG   +   L   +++   +PD+I+Y  ++   +
Sbjct: 792  MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 851

Query: 307  KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL--------------------CMKSWE 346
              GK+  A +    M++ G +        L++GL                    C   ++
Sbjct: 852  MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 911

Query: 347  EKDLLEDAYQVFEKMTKKVSVTDPG----TYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
              D  +DA  V   M+ K++  DPG        ++  L    +  EA   L   I  G  
Sbjct: 912  TTD--QDAVSV---MSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC 966

Query: 403  PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
            P    +N+++ +L     +D A+ +   M           Y  LI  L QL +  +A
Sbjct: 967  PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 1023



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 196/448 (43%), Gaps = 55/448 (12%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK  I +F  + +DG   +   +N L+  LV     + A    +     GL  N  T++ 
Sbjct: 541 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNE 600

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI+ YC   D  +A  V++ M   G+  N+ T+  ++   C SG    AL +LD M   G
Sbjct: 601 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 660

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CKP+  +Y  L+ G C + ++E A+ +   + +DGL P+  TYTA++DG+CK  + + A 
Sbjct: 661 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 720

Query: 246 ELLNEA-----------------------------------IERGVTPNVVTFNTLFNGY 270
            LL                                      IE G+ PNVVT+  + +G 
Sbjct: 721 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 780

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G+    + +   M ++ CLP+ ++YS+L+  L + GK+  A ++F E+ R G   DE
Sbjct: 781 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 840

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL-GKGKKTDEA 389
                ++    M        +E A+    +M K        TYG++I+ L  +    D+ 
Sbjct: 841 ITYVKMIEAYIMSG-----KVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 895

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGE-GKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           L  L   +         T  + +  +  +  ++D  L             S    + L++
Sbjct: 896 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL-------------SVQVQNALVS 942

Query: 449 KLDQLEKSYDACALYGAALKQGVIPQRK 476
            L    + ++A  L G+ + QG+ P ++
Sbjct: 943 NLSTAGRWFEANELLGSMISQGLCPDQE 970



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 168/386 (43%), Gaps = 46/386 (11%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+   +K         +D +  +G    +  ++ L+  L + G     ++   +M   G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+  YN ++  LC  G V +A  ++  V    + PD +TYT+++ G C+    + A+
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL-------------------- 285
           ++ N+  + G  PN VT++TL NG C  G   +   L++                     
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500

Query: 286 ---------------MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
                          MK + C P+  +Y+ L++GL   G ++ A+ +F  M R G   + 
Sbjct: 501 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 560

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR---TLGKGKKTD 387
              N+L+  L      E   ++ A+ V   M +    T+  TY  +I+    LG  KK  
Sbjct: 561 VTYNALINILV-----ENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKK-- 613

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            A++ +++ ++ GH    +T+N +I+  C  G    AL +L LM +    P   SY  LI
Sbjct: 614 -AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 672

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               ++ K   A  L+   +  G+ P
Sbjct: 673 CGFCKISKMESAFGLFNEMVDDGLCP 698



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 147/357 (41%), Gaps = 29/357 (8%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K   L     + + +K+ G   +V  +N L+  L   N    A +        G+ PN  
Sbjct: 712  KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 771

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T++ MI   C       A ++ + M + G  PN+ T++ L+ +L + G+++EA  +  ++
Sbjct: 772  TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 831

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF------ 235
             R G  P+  TY  +++     G+VE A+  L  +   G +P ++TY  ++ G       
Sbjct: 832  ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLL 891

Query: 236  --------------CKVG---RSNEAMELLNEAI-ERGVTPNVVTFNTLFNGYCKEGTPM 277
                          C  G      +A+ +++  + E     +V   N L +     G   
Sbjct: 892  ADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWF 951

Query: 278  KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
            +   LL  M  +   PD+ +Y++LL  LL+   +  A+ +FK M   G EV       L+
Sbjct: 952  EANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELI 1011

Query: 338  RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
              LC     +    ++A   FE M  +    D     ++I  L +    D  +  LH
Sbjct: 1012 CALC-----QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH 1063



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 32/264 (12%)

Query: 66   LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            ++E  ++F  +++ G       +  ++ A +M  + E A  F       G  P  WT+ +
Sbjct: 821  VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 880

Query: 126  MIRCYCNKNDFFEARK--------VIDCMFDNGYHP--------------------NVTT 157
            +I+    KN++  A +        V +C F  GY                      +V  
Sbjct: 881  LIKGL--KNEYLLADQRLAALPDVVPNCSF--GYQTTDQDAVSVMSAKLAELDPGLSVQV 936

Query: 158  FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
               LV++L  +GR  EA E+L  M   G  P+ + YN LL  L  V  V+ A  +  ++ 
Sbjct: 937  QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 996

Query: 218  NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
              G +  +  Y  ++   C++ R  EA       + R   P+ V    L +G  ++G   
Sbjct: 997  TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 1056

Query: 278  KGVGLLKLMKKRNCLPDKISYSTL 301
              +  L +M+ R  +P    Y+ L
Sbjct: 1057 LCMEFLHIMETRRYMPSFHIYTIL 1080


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 203/414 (49%), Gaps = 9/414 (2%)

Query: 63  ASPLKERIDIFDSIKKDGTN---WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           A  ++E +D   +I++ G      S   +N  L +L+  +  E   K +S+    GL P+
Sbjct: 123 AEDMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPD 182

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           + T++ MI  YC +     A +    + ++G   +  T   L+   C++G L++A  +L 
Sbjct: 183 TVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLM 242

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M  +GC+ N  +Y  L++GLC    V EA  +L+ +  DG  P+++TYT ++ G CK G
Sbjct: 243 MMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEG 302

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R ++A  LL+E   RGV P+V T+N + +GYCK G     +G+  LM+   C PD  +Y+
Sbjct: 303 RIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYN 362

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           +L++GL   GK   A  +    +  GF        +++ G C     + + ++DA +V  
Sbjct: 363 SLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYC-----KAEKIDDALRVKS 416

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            M       D   YG++I  L K  +  EA   L+     G  P  + + ++I A C  G
Sbjct: 417 IMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVG 476

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           K+  AL +  L       P+  +Y  LI  L Q +K + A AL     + G+ P
Sbjct: 477 KVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITP 530



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 191/430 (44%), Gaps = 30/430 (6%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D + + G   SV  +N ++         + A+   +     G  P+ WT++ +I   C
Sbjct: 310 LLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC 369

Query: 132 N-KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             K D  EA ++++     G+ P V TFT ++N  CK+ ++ +AL V   M    CK ++
Sbjct: 370 GGKPD--EAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDL 427

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           Q Y  L+  L    R++EA + L  +  +GL P+V  YT+++D +CKVG+   A+E+   
Sbjct: 428 QAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKL 487

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G  PN  T+++L  G  ++    K + L+  M++    P  I+Y+TL+ G  K  +
Sbjct: 488 TEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 547

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-------------------- 350
              A  +F+ M + G   DE+  N L   LC     E+                      
Sbjct: 548 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVD 607

Query: 351 -------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                   E A  + EKM  +    D  TY ++++ L K KK +EAL  L      G   
Sbjct: 608 GFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKG 667

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             + +  +I  +  EGK D A  +   M      PS  +Y + I+   ++ +  +A  L 
Sbjct: 668 NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLI 727

Query: 464 GAALKQGVIP 473
           G   + GV P
Sbjct: 728 GEMERNGVAP 737



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 182/440 (41%), Gaps = 44/440 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +   +++F   + +G   +   ++ L+  L+   +   A+   ++    G+ P   
Sbjct: 474 KVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVI 533

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+  C K++F  A ++ + M  NG  P+   + +L ++LCKSGR +EA   L + 
Sbjct: 534 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKK 593

Query: 182 GRI--------------------------------GCKPNIQTYNCLLKGLCYVGRVEEA 209
           G +                                GCK +  TY+ LL+ LC   ++ EA
Sbjct: 594 GVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEA 653

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             +L  +   G+K ++  YT ++    K G+ + A  + NE I  G  P+ +T+    + 
Sbjct: 654 LSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISS 713

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YCK G   +   L+  M++    PD ++Y+  +NG    G +  A S  K M+    E +
Sbjct: 714 YCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPN 773

Query: 330 ERMMNSLLRGLCMKSWEEKDL-----------LEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
                 LL+     S                 L+  +Q+ E+M K        TY  +I 
Sbjct: 774 YWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIA 833

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
              K  + +EA + L H +     P    +  +I+  C     +KA   +  M E    P
Sbjct: 834 GFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQP 893

Query: 439 SRTSYDMLITKLDQLEKSYD 458
              SY  LIT L   E  YD
Sbjct: 894 HLESYHYLITGLCD-EGDYD 912



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 176/435 (40%), Gaps = 53/435 (12%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK   LKE  D  + I  +G + +V  +  ++ A   + +   A++ F      G  PN+
Sbjct: 438 IKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNA 497

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           WT+S +I          +A  +I  M ++G  P V T+T L+   CK      A  + + 
Sbjct: 498 WTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEM 557

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM-------------------------- 214
           M + G  P+ Q YN L   LC  GR EEAY  L+                          
Sbjct: 558 MEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEF 617

Query: 215 ------NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
                  + N+G K D +TY+ ++   CK  + NEA+ +L++   RGV  N+V +  + +
Sbjct: 618 AAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIIS 677

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
              KEG       +   M      P  I+Y+  ++   K G+I  A  +  EM R G   
Sbjct: 678 EMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAP 737

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK---- 384
           D    N  + G     +     ++ A+   ++M       +  TY ++++   K      
Sbjct: 738 DVVTYNVFINGCGHMGY-----MDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANA 792

Query: 385 ------------KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
                       K D     L   ++ G  P  +T++++I   C   ++++A +LL  M 
Sbjct: 793 HYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHML 852

Query: 433 EHAKIPSRTSYDMLI 447
                P+   Y MLI
Sbjct: 853 GKDISPNEEIYTMLI 867



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 176/396 (44%), Gaps = 28/396 (7%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ ++++G       +N L  AL      E A  F  +    G+     T++ ++  + 
Sbjct: 554 LFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKK---GVVLTKVTYTSLVDGFS 610

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +   A  +I+ M + G   +  T+++L+ +LCK  +L EAL +LDQM   G K NI 
Sbjct: 611 KAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIV 670

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            Y  ++  +   G+ + A  M   + + G KP   TYT  +  +CK+GR  EA  L+ E 
Sbjct: 671 AYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEM 730

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL--------- 302
              GV P+VVT+N   NG    G        LK M   +C P+  +Y  LL         
Sbjct: 731 ERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLA 790

Query: 303 -------NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
                  +G+  W K+     + + MV+ G        +S++ G C     +   LE+A 
Sbjct: 791 NAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFC-----KATRLEEAC 845

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            + + M  K    +   Y ++I+     K  ++A   + + IE G  P   +++ +I  L
Sbjct: 846 VLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGL 905

Query: 416 CGEGKIDKALL----LLFLMYEHAKIPSRTSYDMLI 447
           C EG  DKA      LL + Y H ++  +   D L+
Sbjct: 906 CDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLL 941



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 120/311 (38%), Gaps = 51/311 (16%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E + I D +   G   ++  +  ++  ++   + + A   F+E  S G  P++ 
Sbjct: 646 KQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAI 705

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+++ I  YC      EA  +I  M  NG  P+V T+ + +N     G +  A   L +M
Sbjct: 706 TYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRM 765

Query: 182 GRIGCKPNIQTYNCLLK------------------------------------------- 198
               C+PN  TY  LLK                                           
Sbjct: 766 IDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTA 825

Query: 199 --------GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
                   G C   R+EEA  +L ++    + P+   YT ++   C +    +A   +  
Sbjct: 826 VTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTN 885

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            IE G  P++ +++ L  G C EG   K   L   + + +   +++++  L +GLLK G 
Sbjct: 886 MIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGH 945

Query: 311 IRPAVSIFKEM 321
           +     +   M
Sbjct: 946 VDICSQLLSAM 956



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/314 (21%), Positives = 129/314 (41%), Gaps = 23/314 (7%)

Query: 41   ESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
            E +     P ++    F+    K   ++E   +   ++++G    V  +N  +     + 
Sbjct: 694  EMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMG 753

Query: 100  EQETAVKFFSEASSYGLAPNSWTFSIMIRC----------YCNKNDFFEARKV------I 143
              + A             PN WT+ ++++           Y + +  +   K+      +
Sbjct: 754  YMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLL 813

Query: 144  DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
            + M  +G +P   T++ ++   CK+ RL+EA  +LD M      PN + Y  L+K  C +
Sbjct: 814  ERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDI 873

Query: 204  GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
               E+A   + N+   G +P + +Y  ++ G C  G  ++A  L  + +E     N V +
Sbjct: 874  KLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAW 933

Query: 264  NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
              L +G  K G       LL  M+ R+C  D  +YS + N       I  A  +++  + 
Sbjct: 934  KILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTN------NIHEASGMYESYMC 987

Query: 324  FGFEVDERMMNSLL 337
                   RM ++LL
Sbjct: 988  APLVGQNRMQHALL 1001


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 202/408 (49%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +   +   G    +  +N +L  L M        +   E      APN  TF+ 
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C    F    +V+  M ++G  P++  +  +++ +CK G L+ A E+L++M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KPN+  YN +LKGLC   R +EA E+L  +       D  T+  ++D FC+ G  +  +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL + +  G  P+V+T+ T+ NG+CKEG   + V LLK M    C P+ +SY+ +L GL
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+   A  +  +M++ G   +    N+L+  LC     +K L+E A ++ ++M    
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC-----KKGLVEQAIELLKQMLVNG 491

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  +Y  VI  LGK  KT+EAL  L+  +  G  P TI ++++  AL  EG+++K +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   + +         Y+ +I+ L +  ++  A   +   +  G +P
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 189/364 (51%), Gaps = 6/364 (1%)

Query: 66  LKERI-DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           L ER+ ++   + + G    +  +  ++  +      E A +  +   SYGL PN   ++
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +++  C+   + EA +++  MF      +  TF ILV+  C++G +   +E+L+QM   
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           GC P++ TY  ++ G C  G ++EA  +L ++ + G KP+  +YT V+ G C  GR  +A
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            EL+++ I++G  PN VTFNTL N  CK+G   + + LLK M    C PD ISYST+++G
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K GK   A+ +   MV  G   +  + +S+    C  S E +  +    Q+F+ +   
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSI---ACALSREGR--VNKVIQMFDNIKDT 560

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              +D   Y  VI +L K  +TD A+    + +  G +P   T+  +I+ L  EG   +A
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA 620

Query: 425 LLLL 428
             LL
Sbjct: 621 QELL 624



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 177/359 (49%), Gaps = 7/359 (1%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           + PN++TF  ++R  C +    +A +V+D M   G  P    + +++ + C+SG  + ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            VL+ M   GC  +    N +L  +C  G V+EA  +L  +   G + D+ +Y AV+ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           C   R  +  EL++E +     PN+VTFNTL    C+ G   +   +L  M +  C PD 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDA 354
             Y+T+++G+ K G +  A  I   M  +G + +    N++L+GLC  + W+E      A
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE------A 340

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++  +M +K    D  T+ I++    +    D  +  L   +  G +P  IT+  VI  
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            C EG ID+A++LL  M      P+  SY +++  L    +  DA  L    ++QG  P
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPP 459



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 186/405 (45%), Gaps = 40/405 (9%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++   E S  G AP    + +++   C    F  + +V++ M   G   +     +++N
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLN 189

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV---GRVEE------------ 208
           ++C+ G + EA+ +L ++   GC+ +I +YN +LKGLC     G VEE            
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 209 --------------------AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
                                +E+L  +   G  PD+  Y  ++DG CK G    A E+L
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           N     G+ PNVV +NT+  G C      +   LL  M +++C  D ++++ L++   + 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G +   + + ++M+  G   D     +++ G C     ++ L+++A  + + M+      
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFC-----KEGLIDEAVMLLKSMSSCGCKP 424

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +  +Y IV++ L    +  +A   +   I+ G  P  +TFN +I  LC +G +++A+ LL
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M  +   P   SY  +I  L +  K+ +A  L    + +G+ P
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 160/326 (49%), Gaps = 8/326 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I + +   G   +V  +N +L  L      + A +  SE        +  TF+I++  +
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C         ++++ M  +G  P+V T+T ++N  CK G + EA+ +L  M   GCKPN 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  +LKGLC  GR  +A E++  +   G  P+  T+  +++  CK G   +A+ELL +
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G +P++++++T+ +G  K G   + + LL +M  +   P+ I YS++   L + G+
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +   + +F  +       D  + N+++  LC K WE     + A   F  M     + + 
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVLYNAVISSLC-KRWET----DRAIDFFAYMVSNGCMPNE 601

Query: 371 GTYGIVIRTL---GKGKKTDEALIHL 393
            TY ++I+ L   G  K+  E L  L
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 132/269 (49%), Gaps = 8/269 (2%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            VDR+        I++ + +   G    V  +  ++         + AV      SS G 
Sbjct: 371 LVDRV--------IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            PN+ +++I+++  C+   + +A +++  M   G  PN  TF  L+N LCK G +++A+E
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +L QM   GC P++ +Y+ ++ GL   G+ EEA E+L  + N G+ P+   Y+++     
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + GR N+ +++ +   +  +  + V +N + +  CK     + +     M    C+P++ 
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +Y+ L+ GL   G  + A  +  E+   G
Sbjct: 603 TYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 13/300 (4%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+ SLC +GR  EA   L   G       +  YN ++ G C  G++  A  +   V    
Sbjct: 53  LIRSLCSAGRTAEAARALADAGD---AAGVVAYNAMVAGYCRAGQLAAARRLAAAVP--- 106

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + P+ YT+  V+ G C  GR  +A+E+L+E   +G  P    ++ +    C+ G     V
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +L+ M  + C  D  + + +LN + + G +  AV + +++  FG E D    N++L+GL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 341 CM-KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           CM K W       D  ++ ++M +     +  T+  +I  L +    +     L    E 
Sbjct: 227 CMAKRW------GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P    +  +I  +C EG ++ A  +L  M  +   P+   Y+ ++  L   E+  +A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 105/231 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +  S+   G   +   +  +L  L        A +  S+    G  PN  
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C K    +A +++  M  NG  P++ +++ +++ L K+G+ +EALE+L+ M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN   Y+ +   L   GRV +  +M  N+K+  ++ D   Y AV+   CK   +
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           + A++     +  G  PN  T+  L  G   EG   +   LL  +  R  L
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 202/408 (49%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +   +   G    +  +N +L  L M        +   E      APN  TF+ 
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C    F    +V+  M ++G  P++  +  +++ +CK G L+ A E+L++M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KPN+  YN +LKGLC   R +EA E+L  +       D  T+  ++D FC+ G  +  +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL + +  G  P+V+T+ T+ NG+CKEG   + V LLK M    C P+ +SY+ +L GL
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+   A  +  +M++ G   +    N+L+  LC     +K L+E A ++ ++M    
Sbjct: 437 CSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC-----KKGLVEQAIELLKQMLVNG 491

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  +Y  VI  LGK  KT+EAL  L+  +  G  P TI ++++  AL  EG+++K +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   + +         Y+ +I+ L +  ++  A   +   +  G +P
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 599



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 189/364 (51%), Gaps = 6/364 (1%)

Query: 66  LKERI-DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           L ER+ ++   + + G    +  +  ++  +      E A +  +   SYGL PN   ++
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +++  C+   + EA +++  MF      +  TF ILV+  C++G +   +E+L+QM   
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           GC P++ TY  ++ G C  G ++EA  +L ++ + G KP+  +YT V+ G C  GR  +A
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            EL+++ I++G  PN VTFNTL N  CK+G   + + LLK M    C PD ISYST+++G
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K GK   A+ +   MV  G   +  + +S+    C  S E +  +    Q+F+ +   
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSI---ACALSREGR--VNKVIQMFDNIKDT 560

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              +D   Y  VI +L K  +TD A+    + +  G +P   T+  +I+ L  EG   +A
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA 620

Query: 425 LLLL 428
             LL
Sbjct: 621 QELL 624



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 177/359 (49%), Gaps = 7/359 (1%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           + PN++TF  ++R  C +    +A +V+D M   G  P    + +++ + C+SG  + ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            VL+ M   GC  +    N +L  +C  G V+EA  +L  +   G + D+ +Y AV+ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           C   R  +  EL++E +     PN+VTFNTL    C+ G   +   +L  M +  C PD 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDA 354
             Y+T+++G+ K G +  A  I   M  +G + +    N++L+GLC  + W+E      A
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKE------A 340

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++  +M +K    D  T+ I++    +    D  +  L   +  G +P  IT+  VI  
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            C EG ID+A++LL  M      P+  SY +++  L    +  DA  L    ++QG  P
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPP 459



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 186/405 (45%), Gaps = 40/405 (9%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++   E S  G AP    + +++   C    F  + +V++ M   G   +     +++N
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLN 189

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV---GRVEE------------ 208
           ++C+ G + EA+ +L ++   GC+ +I +YN +LKGLC     G VEE            
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 209 --------------------AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
                                +E+L  +   G  PD+  Y  ++DG CK G    A E+L
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           N     G+ PNVV +NT+  G C      +   LL  M +++C  D ++++ L++   + 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G +   + + ++M+  G   D     +++ G C     ++ L+++A  + + M+      
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFC-----KEGLIDEAVMLLKSMSSCGCKP 424

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +  +Y IV++ L    +  +A   +   I+ G  P  +TFN +I  LC +G +++A+ LL
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M  +   P   SY  +I  L +  K+ +A  L    + +G+ P
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 160/326 (49%), Gaps = 8/326 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I + +   G   +V  +N +L  L      + A +  SE        +  TF+I++  +
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C         ++++ M  +G  P+V T+T ++N  CK G + EA+ +L  M   GCKPN 
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  +LKGLC  GR  +A E++  +   G  P+  T+  +++  CK G   +A+ELL +
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G +P++++++T+ +G  K G   + + LL +M  +   P+ I YS++   L + G+
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +   + +F  +       D  + N+++  LC K WE     + A   F  M     + + 
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVLYNAVISSLC-KRWET----DRAIDFFAYMVSNGCMPNE 601

Query: 371 GTYGIVIRTL---GKGKKTDEALIHL 393
            TY ++I+ L   G  K+  E L  L
Sbjct: 602 STYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 132/269 (49%), Gaps = 8/269 (2%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            VDR+        I++ + +   G    V  +  ++         + AV      SS G 
Sbjct: 371 LVDRV--------IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            PN+ +++I+++  C+   + +A +++  M   G  PN  TF  L+N LCK G +++A+E
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +L QM   GC P++ +Y+ ++ GL   G+ EEA E+L  + N G+ P+   Y+++     
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + GR N+ +++ +   +  +  + V +N + +  CK     + +     M    C+P++ 
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +Y+ L+ GL   G  + A  +  E+   G
Sbjct: 603 TYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 13/300 (4%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+ SLC +GR  EA   L   G       +  YN ++ G C  G++  A  +   V    
Sbjct: 53  LIRSLCSAGRTAEAARALADAGD---AAGVVAYNAMVAGYCRAGQLAAARRLAAAVP--- 106

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + P+ YT+  V+ G C  GR  +A+E+L+E   +G  P    ++ +    C+ G     V
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +L+ M  + C  D  + + +LN + + G +  AV + +++  FG E D    N++L+GL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 341 CM-KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           CM K W       D  ++ ++M +     +  T+  +I  L +    +     L    E 
Sbjct: 227 CMAKRW------GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P    +  +I  +C EG ++ A  +L  M  +   P+   Y+ ++  L   E+  +A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 105/231 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +  S+   G   +   +  +L  L        A +  S+    G  PN  
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C K    +A +++  M  NG  P++ +++ +++ L K+G+ +EALE+L+ M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN   Y+ +   L   GRV +  +M  N+K+  ++ D   Y AV+   CK   +
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           + A++     +  G  PN  T+  L  G   EG   +   LL  +  R  L
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 205/429 (47%), Gaps = 43/429 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + + +F  + K     S+ +F+ LL A+  +N+ +  +    +  + G+  N +T+SI
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM---- 181
           +I C+C ++    A  V+  M   GY PN+ T + L+N  C S R+ EA+ ++DQM    
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 182 ----------------------------GRI---GCKPNIQTYNCLLKGLCYVGRVEEAY 210
                                        R+   GC+P++ TY  ++ GLC  G  + A+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L  ++   L+P V  YT ++DG CK    ++A+ L  E   +G+ PNVVT+++L +  
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C  G       LL  M +R   PD  ++S L++  +K GK+  A  ++ EMV+   +   
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              +SL+ G CM      D L++A Q+FE M  K    D  +Y  +I+   K K+ DE +
Sbjct: 362 VTYSSLINGFCM-----HDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGM 416

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                  + G +  T+T+  +IQ L   G  D A  +   M      P+  +Y+ L+  L
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476

Query: 451 ---DQLEKS 456
               +LEK+
Sbjct: 477 CKNGKLEKA 485



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 204/408 (50%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D +   G   +   FN L+  L + N+   AV       + G  P+  T+ +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGV 226

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C + D   A  +++ M      P V  +T +++ LCK+  + +AL +  +M   G
Sbjct: 227 VVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKG 286

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+ TY+ L+  LC  GR  +A  +L ++    + PDV+T++A++D F K G+  EA 
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L +E ++R + P++VT+++L NG+C      +   + + M  ++C PD +SYSTL+ G 
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGF 406

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++   + +F+EM + G   +     +L++GL    ++  D  + A ++F++M    
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGL----FQAGD-CDMAQEIFKEMVSDG 461

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY  ++  L K  K ++A++   +       P   T+N +I+ +C  GK++   
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L   +      P   +Y+ +I+   +     +A AL+    + G +P
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 202/412 (49%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           + S L   + +   + K G   ++   + LL           AV    +    G  PN+ 
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I      N   EA  +ID M   G  P++ T+ ++VN LCK G    A  +L++M
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKM 247

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +   +P +  Y  ++ GLC    +++A  +   ++  G++P+V TY++++   C  GR 
Sbjct: 248 EQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A  LL++ IER + P+V TF+ L + + KEG  ++   L   M KR+  P  ++YS+L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG     ++  A  +F+ MV      D    ++L++G C     +   +++  ++F +M
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFC-----KAKRVDEGMELFREM 422

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           +++  V +  TY  +I+ L +    D A       +  G  P  +T+N ++  LC  GK+
Sbjct: 423 SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +KA+++   +      P+  +Y+++I  + +  K  D   L+     +GV P
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 178/368 (48%), Gaps = 12/368 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + +++F  ++  G   +V  ++ L+  L        A +  S+     + P+ +
Sbjct: 268 KNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS +I  +  +    EA K+ D M      P++ T++ L+N  C   RL EA ++ + M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C P++ +Y+ L+KG C   RV+E  E+   +   GL  +  TYT ++ G  + G  
Sbjct: 388 VSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDC 447

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A E+  E +  GV PN++T+NTL +G CK G   K + + + +++    P   +Y+ +
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKDLLEDAYQVFEK 360
           + G+ K GK+     +F  +   G + D    N+++ G C K S EE D L      F++
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL------FKE 561

Query: 361 MTKKVSVTDPGTYGIVIRT-LGKGKKTDEA-LIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           M +  ++ + G Y  +IR  L  G +   A LI    +        TI    ++  +  +
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI---GLVTNMLHD 618

Query: 419 GKIDKALL 426
           G++DK+ L
Sbjct: 619 GRLDKSFL 626



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 149/299 (49%), Gaps = 1/299 (0%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           ++ AS   ++ ++ K NP        +D  +K   L E   ++D + K   + S+  ++ 
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    M +  + A + F    S    P+  ++S +I+ +C      E  ++   M   G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRG 426

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              N  T+T L+  L ++G    A E+  +M   G  PNI TYN LL GLC  G++E+A 
Sbjct: 427 LVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   ++   ++P +YTY  +++G CK G+  +  +L      +GV P+VV +NT+ +G+
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           C++G+  +   L K MK+   LP+   Y+TL+   L+ G    +  + KEM   GF  D
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 147/307 (47%), Gaps = 9/307 (2%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +L +A+ +  +M +    P+I  ++ LL  +  + + +    +   ++N G+  + YTY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++ FC+  +   A+ +L + ++ G  PN+VT ++L NGYC      + V L+  M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P+ ++++TL++GL    K   AV++   MV  G + D      ++ GLC +   + D
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRG--DTD 238

Query: 350 LLEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           L   A+ +  KM +     +PG   Y  +I  L K K  D+AL         G  P  +T
Sbjct: 239 L---AFILLNKMEQ--GKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVT 293

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           ++++I  LC  G+   A  LL  M E    P   ++  LI    +  K  +A  LY   +
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 468 KQGVIPQ 474
           K+ + P 
Sbjct: 354 KRSIDPS 360


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 226/486 (46%), Gaps = 76/486 (15%)

Query: 62  KASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K S   + +DIF  + +  G    +  +N LL AL+  N+ + A  FF    + GL+PN 
Sbjct: 65  KNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNL 124

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++I+I+  C K  F +A+++++ M+  G+ P+V ++  L+NSL K+G + +AL++ D+
Sbjct: 125 QTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 184

Query: 181 MGRIGCK------------------------------------PNIQTYNCLLKGLCYVG 204
           M   G                                      PNI +YN ++ GLC  G
Sbjct: 185 MPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCG 244

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           + +E++E+   +K +    D+YTY+ ++ G C  G  + A  +  E  E GV+P+VV +N
Sbjct: 245 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 304

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKK----------------------------------RN 290
           T+ NGY + G   + + L K+M+K                                  ++
Sbjct: 305 TMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKD 364

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C  D ++Y  L++GL K G +  A+SI +E      ++D    +S++ GLC      +  
Sbjct: 365 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC-----REGR 419

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           L++   V ++MTK     +P     VI    +  K ++AL    + +  G  P  +T+N 
Sbjct: 420 LDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 479

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I  L    +  +A  L+  M +    P+  +Y +L+  L Q +K   A  L+  AL++G
Sbjct: 480 LINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 539

Query: 471 VIPQRK 476
             P  K
Sbjct: 540 FKPDVK 545



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 177/354 (50%), Gaps = 6/354 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++A  ++E ++++  ++K+G   +V  +N L+  L    + + A+  +          +S
Sbjct: 311 LRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADS 369

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+ +++   C      +A  +++   +     +   ++ ++N LC+ GRL E   VLDQ
Sbjct: 370 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQ 429

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + GCKPN    N ++ G     ++E+A     N+ + G  P V TY  +++G  K  R
Sbjct: 430 MTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 489

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA  L+ E +++G  PN++T++ L NG C+       + L     ++   PD   ++ 
Sbjct: 490 FSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNI 549

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++GL   GK+  A+ ++ EM +     +    N+L+ G     ++ +D  E A ++++ 
Sbjct: 550 IIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGF----YKVRDF-ERASKIWDH 604

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           + +     D  +Y I ++ L    +  +A+  L+ A++ G +P  IT+N ++Q 
Sbjct: 605 ILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/412 (21%), Positives = 187/412 (45%), Gaps = 6/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K     E  +I+  +KK+     +  ++ L+  L      + A + + E +  G++P+  
Sbjct: 242 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 301

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ M+  Y       E  ++   M   G    V ++ IL+  L ++ ++ EA+ + + +
Sbjct: 302 VYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELL 360

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C  +  TY  L+ GLC  G + +A  +L   +N     D + Y+++++G C+ GR 
Sbjct: 361 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 420

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +E   +L++  + G  PN    N + NG+ +       +     M  + C P  ++Y+TL
Sbjct: 421 DEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTL 480

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K  +   A ++ KEM++ G++ +    + L+ GLC     +   L+ A  ++ + 
Sbjct: 481 INGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLC-----QGKKLDMALNLWCQA 535

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K    D   + I+I  L    K ++AL       +   +P  +T N +++        
Sbjct: 536 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDF 595

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++A  +   + ++   P   SY++ +  L    +  DA      A+ +GV+P
Sbjct: 596 ERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLP 647



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 121/241 (50%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   + D + K G   +    N ++   V  ++ E A++FF    S G  P   T++ 
Sbjct: 420 LDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 479

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I        F EA  ++  M   G+ PN+ T+++L+N LC+  +L  AL +  Q    G
Sbjct: 480 LINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 539

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KP+++ +N ++ GLC  G+VE+A ++   +K     P++ T+  +M+GF KV     A 
Sbjct: 540 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERAS 599

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +  ++ G+ P+++++N    G C        VG L     R  LP  I+++ L+ G 
Sbjct: 600 KIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659

Query: 306 L 306
           L
Sbjct: 660 L 660



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 109/210 (51%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++AS L++ +  F ++   G   +V  +N L+  L        A     E    G  PN 
Sbjct: 450 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNM 509

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+S+++   C       A  +     + G+ P+V    I+++ LC SG++++AL++  +
Sbjct: 510 ITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSE 569

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M +  C PN+ T+N L++G   V   E A ++  ++   GL+PD+ +Y   + G C   R
Sbjct: 570 MKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHR 629

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            ++A+  LN+A++RGV P  +T+N L  GY
Sbjct: 630 ISDAVGFLNDAVDRGVLPTAITWNILVQGY 659



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 1/239 (0%)

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           + + +G  PN +  + +I  +   +   +A +    M   G  P V T+  L+N L K+ 
Sbjct: 429 QMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 488

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           R  EA  ++ +M + G KPN+ TY+ L+ GLC   +++ A  +       G KPDV  + 
Sbjct: 489 RFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 548

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++ G C  G+  +A++L +E  +R   PN+VT NTL  G+ K     +   +   + + 
Sbjct: 549 IIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQY 608

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG-LCMKSWEE 347
              PD ISY+  L GL    +I  AV    + V  G        N L++G L +K + E
Sbjct: 609 GLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYME 667


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 200/410 (48%), Gaps = 6/410 (1%)

Query: 65  PLKERIDIF-DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           P+ E + +  D +   G    V  +N +L  L M            E  + G  PN  TF
Sbjct: 196 PVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTF 255

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           S +I   C    F    +V   M ++G  P+V  +  +++ +CK  RL+ A  +L++M  
Sbjct: 256 STLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPS 315

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            G  PN+  YN LLKGLC   R EEA  +L  + +     D  T+  ++D  C+ G  + 
Sbjct: 316 YGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDR 375

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
            +E+L + +E G  P+V+T+ T+ NG+CKEG   + V LL+ M    C P+ +SY+ +L 
Sbjct: 376 VIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLK 435

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL    +   A  +  +M++ G   +    N+L+  LC     +K L+E A ++ ++M  
Sbjct: 436 GLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLC-----KKGLVEQAIELLKQMLV 490

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
                D  +Y  VI  LGK   TDEAL  L+  ++ G  P TI ++++  AL GEG+I+K
Sbjct: 491 NGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINK 550

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            + +   + +         Y+ +I+ L +  ++  A       +  G +P
Sbjct: 551 VIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVP 600



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 189/360 (52%), Gaps = 6/360 (1%)

Query: 66  LKERI-DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           L ER+ ++   + + G    V  +  ++  +      E A    +   SYGL+PN   ++
Sbjct: 267 LFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYN 326

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +++  C+ + + EA  ++  MFD     +  TF ILV+ LC++G +   +EVL+QM   
Sbjct: 327 TLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEH 386

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           GC P++ TY  ++ G C  G ++EA  +L ++   G +P+  +YT V+ G C   R  +A
Sbjct: 387 GCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDA 446

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            EL+++ I++G  PN VTFNTL N  CK+G   + + LLK M    C PD ISYST+++G
Sbjct: 447 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 506

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K G    A+ +   MV+ G   +  + +S+   L   S E +  +    Q+FE +   
Sbjct: 507 LGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASAL---SGEGR--INKVIQMFENIQDT 561

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              +D   Y  VI +L K  +TD A+  L + +  G +P   T+  +I+ L  EG + +A
Sbjct: 562 TVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA 621



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 177/362 (48%), Gaps = 6/362 (1%)

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
           S  +APN++T+  ++R  C +    +A  V+D M   G  P    + + + + C++   +
Sbjct: 104 SVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFR 163

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAV 231
            A+ VL  +   GC  ++   N +L+ +C  G V+EA  +L + + + G +PDV +Y AV
Sbjct: 164 GAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAV 223

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           + G C   R     +L+ E +  G  PN+VTF+TL    C+ G   +   +   M +  C
Sbjct: 224 LRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGC 283

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            PD   Y+T+++G+ K  ++  A  I   M  +G   +    N+LL+GLC       D  
Sbjct: 284 APDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLC-----SADRW 338

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           E+A  +  +M  K    D  T+ I++  L +    D  +  L   +E G +P  IT+  V
Sbjct: 339 EEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTV 398

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I   C EG ID+A++LL  M      P+  SY +++  L   E+  DA  L    ++QG 
Sbjct: 399 INGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGC 458

Query: 472 IP 473
            P
Sbjct: 459 PP 460



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 145/277 (52%), Gaps = 5/277 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+  L      +  ++   +   +G  P+  T++ +I  +C +    EA  ++  M 
Sbjct: 360 FNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMA 419

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PN  ++TI++  LC + R  +A E++ QM + GC PN  T+N L+  LC  G VE
Sbjct: 420 ACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 479

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A E+L  +  +G  PD+ +Y+ V+DG  K G ++EA+ELLN  +++G++PN + ++++ 
Sbjct: 480 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIA 539

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +    EG   K + + + ++      D + Y+ +++ L K G+   A+     MV  G  
Sbjct: 540 SALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCV 599

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
            +E     L+RGL       +  +++A ++  ++  K
Sbjct: 600 PNESTYTILIRGL-----ASEGFVKEAQEILTELCSK 631



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 132/269 (49%), Gaps = 8/269 (2%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            VDR+        I++ + + + G    V  +  ++         + AV      ++ G 
Sbjct: 372 LVDRV--------IEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGC 423

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            PN+ +++I+++  C+   + +A +++  M   G  PN  TF  L+N LCK G +++A+E
Sbjct: 424 RPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 483

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +L QM   GC P++ +Y+ ++ GL   G  +EA E+L  +   G+ P+   Y+++     
Sbjct: 484 LLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALS 543

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
             GR N+ +++     +  V  + V +N + +  CK G   + +  L  M    C+P++ 
Sbjct: 544 GEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNES 603

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +Y+ L+ GL   G ++ A  I  E+   G
Sbjct: 604 TYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 141/326 (43%), Gaps = 37/326 (11%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
            + L+ SLC +GR  EA   L   G       +  YN ++ G C  G++  A  +  +V 
Sbjct: 50  LSALIRSLCAAGRTAEAARALSAAGG---GAGVVAYNAMVAGYCRAGQLAAARRLAASVP 106

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
              + P+ YTY  ++   C  GR  +A+ +L++   RG  P    ++      C+     
Sbjct: 107 ---VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFR 163

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV-RFGFEVDERMMNSL 336
             VG+L+ +  R C  D  + + +L  +   G +  AV + ++++  FG E D    N++
Sbjct: 164 GAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAV 223

Query: 337 LRGLCM-KSWEE-KDLLED----------------------------AYQVFEKMTKKVS 366
           LRGLCM + W   +DL+E+                             ++V  +M +   
Sbjct: 224 LRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGC 283

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D   Y  +I  + K ++ + A   L+     G  P  + +N +++ LC   + ++A  
Sbjct: 284 APDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEG 343

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQ 452
           LL  M++        ++++L+  L Q
Sbjct: 344 LLAEMFDKDCPLDDVTFNILVDFLCQ 369


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 203/406 (50%), Gaps = 6/406 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   ++  + +D    ++  +N ++     L   E A ++ S+    GL P+ +T++ +I
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             YC + D   A KV + M   G   N   +T L++ LC + R+ EA+++  +M    C 
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P ++TY  L+K LC   R  EA  ++  ++  G+KP+++TYT ++D  C   +  +A EL
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L + +E+G+ PNV+T+N L NGYCK G     V +++LM+ R   P+  +Y+ L+ G  K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
              +  A+ +  +M+      D    NSL+ G C          + AY++   M  +  V
Sbjct: 441 -SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN-----FDSAYRLLSLMNDRGLV 494

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  TY  +I +L K K+ +EA        + G  P  + +  +I   C  GK+D+A L+
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L  M     +P+  +++ LI  L    K  +A  L    +K G+ P
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 185/363 (50%), Gaps = 6/363 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+M      + ++A K F+E    G   N   ++ +I   C      EA  +   M 
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D+   P V T+T+L+ SLC S R  EAL ++ +M   G KPNI TY  L+  LC   + E
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A E+L  +   GL P+V TY A+++G+CK G   +A++++     R ++PN  T+N L 
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            GYCK     K +G+L  M +R  LPD ++Y++L++G  + G    A  +   M   G  
Sbjct: 436 KGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D+    S++  LC     +   +E+A  +F+ + +K    +   Y  +I    K  K D
Sbjct: 495 PDQWTYTSMIDSLC-----KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA + L   +    +P ++TFN +I  LC +GK+ +A LL   M +    P+ ++  +LI
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609

Query: 448 TKL 450
            +L
Sbjct: 610 HRL 612



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 187/395 (47%), Gaps = 24/395 (6%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   + + G   +V  +N L+         E AV       S  L+PN+ T++ +I+ Y
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C K++  +A  V++ M +    P+V T+  L++  C+SG    A  +L  M   G  P+ 
Sbjct: 439 C-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  ++  LC   RVEEA ++  +++  G+ P+V  YTA++DG+CK G+ +EA  +L +
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + +   PN +TFN L +G C +G   +   L + M K    P   + + L++ LLK G 
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
              A S F++M+  G + D     + ++  C     E  LL DA  +  KM +     D 
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC----REGRLL-DAEDMMAKMRENGVSPDL 672

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ----------------- 413
            TY  +I+  G   +T+ A   L    + G  P   TF ++I+                 
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732

Query: 414 -ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            A+    + D  + LL  M EH+  P+  SY+ LI
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 173/382 (45%), Gaps = 18/382 (4%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+         ++A +  S  +  GL P+ WT++ MI   C      EA  + D
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   G +PNV  +T L++  CK+G++ EA  +L++M    C PN  T+N L+ GLC  G
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +++EA  +   +   GL+P V T T ++    K G  + A     + +  G  P+  T+ 
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           T    YC+EG  +    ++  M++    PD  +YS+L+ G    G+   A  + K M   
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701

Query: 325 GFEVDERMMNSLLRGLC-MKSWEEK----------DLLE--DAYQVFEKMTKKVSVTDPG 371
           G E  +    SL++ L  MK  ++K          +++E     ++ EKM +     +  
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761

Query: 372 TYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +Y  +I  +   G  +  ++   H+      G  P  + FN ++   C   K ++A  ++
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQR--NEGISPSELVFNALLSCCCKLKKHNEAAKVV 819

Query: 429 FLMYEHAKIPSRTSYDMLITKL 450
             M     +P   S  +LI  L
Sbjct: 820 DDMICVGHLPQLESCKVLICGL 841



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 162/357 (45%), Gaps = 31/357 (8%)

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
           F+  Y   +  +  L+NSL + G + E  +V  +M      PNI TYN ++ G C +G V
Sbjct: 175 FELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNV 234

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           EEA + +  +   GL PD +TYT+++ G+C+    + A ++ NE   +G   N V +  L
Sbjct: 235 EEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHL 294

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G C      + + L   MK   C P   +Y+ L+  L    +   A+++ KEM   G 
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354

Query: 327 EVDERMMNSLLRGLC------------------------------MKSWEEKDLLEDAYQ 356
           + +      L+  LC                              +  + ++ ++EDA  
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           V E M  +    +  TY  +I+   K     +A+  L+  +E   +P  +T+N++I   C
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             G  D A  LL LM +   +P + +Y  +I  L + ++  +AC L+ +  ++GV P
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 183/406 (45%), Gaps = 26/406 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  ++E  D+FDS+++ G N +V  +  L+       + + A     +  S    PNS 
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C      EA  + + M   G  P V+T TIL++ L K G    A     QM
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP+  TY   ++  C  GR+ +A +M+  ++ +G+ PD++TY++++ G+  +G++
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLF-----------NGYCKEGTPMKG-------VGLL 283
           N A ++L    + G  P+  TF +L             G   E   M         V LL
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR-FGFEVDERMMNSLLRGLC- 341
           + M + +  P+  SY  L+ G+ + G +R A  +F  M R  G    E + N+LL   C 
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
           +K   E      A +V + M     +    +  ++I  L K  + +       + ++ G+
Sbjct: 809 LKKHNE------AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
               + +  +I  +  +G ++    L  +M ++    S  +Y +LI
Sbjct: 863 YEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/346 (20%), Positives = 146/346 (42%), Gaps = 55/346 (15%)

Query: 49  PRSLQAQRFVDRIKA-SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P SL     +  + A   LKE   + + + K G   +VS    L+  L+   + + A   
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F +  S G  P++ T++  I+ YC +    +A  ++  M +NG  P++ T++ L+     
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684

Query: 168 SGRLKEALEVLDQMGRIGCKP--------------------------------------- 188
            G+   A +VL +M   GC+P                                       
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744

Query: 189 --------------NIQTYNCLLKGLCYVGRVEEAYEMLMNV-KNDGLKPDVYTYTAVMD 233
                         N ++Y  L+ G+C VG +  A ++  ++ +N+G+ P    + A++ 
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             CK+ + NEA +++++ I  G  P + +   L  G  K+G   +G  + + + +     
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYE 864

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           D++++  +++G+ K G +     +F  M + G +   +  + L+ G
Sbjct: 865 DELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 185/367 (50%), Gaps = 5/367 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S  DF  LL ++  +    T +   ++  S+G+ P+ +T +I+I  +C+      A  V+
Sbjct: 149 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 208

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   G  P+ TTF  L+  LC  G++ EAL + D+    G +P++ TY  L+ GLC V
Sbjct: 209 AKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKV 268

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A  +L ++     +P+V  Y  ++D  CK  +  EA  L +E I +G++P++ T+
Sbjct: 269 GNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTY 328

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L +  C          LL  M     +P+ + +ST+++ L K G I  A  +   M++
Sbjct: 329 NSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIK 388

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E D     +L+ G C++S      +++A +VF+ M  K  V +  +Y I+I    + 
Sbjct: 389 RGVEPDVVTYTALMDGHCLRSE-----MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 443

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           ++ D+A+  L      G I  T+T+N +I  LC  G++  A+ L   M    +IP   +Y
Sbjct: 444 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 503

Query: 444 DMLITKL 450
            +L+  L
Sbjct: 504 RILLDYL 510



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 184/406 (45%), Gaps = 9/406 (2%)

Query: 24  PQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTN 82
           P FN L     A  S    L +   P ++   + +  I K       + +   +   G  
Sbjct: 126 PHFNTL---DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIP 182

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
             V   N L+ +   L     A    ++    G  P++ TF+ +IR  C +    EA  +
Sbjct: 183 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL 242

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
            D     G+ P+V T+  L+N LCK G    A+ +L  M +  C+PN+  YN ++  LC 
Sbjct: 243 FDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK 302

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
             +V EA+ +   +   G+ PD++TY +++   C +        LLNE +   + PNVV 
Sbjct: 303 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 362

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           F+T+ +  CKEG       ++ +M KR   PD ++Y+ L++G     ++  AV +F  MV
Sbjct: 363 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 422

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
             G   + R  N L+ G C     +K     A  + E+M+ +  + D  TY  +I  L  
Sbjct: 423 HKGCVPNVRSYNILINGYCQIQRMDK-----AMGLLEQMSLQGLIADTVTYNTLIHGLCH 477

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             +   A+   H  +  G IP  +T+  ++  LC    + +A++LL
Sbjct: 478 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLL 523



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 177/372 (47%), Gaps = 6/372 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + K   + E  ++F  +   G +  +  +N L+ AL  L E +     
Sbjct: 288 PNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTL 347

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            +E  +  + PN   FS ++   C +     A  V+D M   G  P+V T+T L++  C 
Sbjct: 348 LNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCL 407

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              + EA++V D M   GC PN+++YN L+ G C + R+++A  +L  +   GL  D  T
Sbjct: 408 RSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVT 467

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++ G C VGR   A+ L +E +  G  P++VT+  L +  CK     + + LLK ++
Sbjct: 468 YNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE 527

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
             N   D + Y+  ++G+ + G++  A  +F  +   G + D R  N ++ GLC     +
Sbjct: 528 GSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLC-----K 582

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           + LL++A ++F KM +     D   Y  +IR   +  +T  A   L   +  G      T
Sbjct: 583 RGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVST 642

Query: 408 FNNVIQALCGEG 419
              +++ L  +G
Sbjct: 643 TTLIVEMLSDDG 654



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 179/376 (47%), Gaps = 5/376 (1%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
            N  + A+  F+        P++  F+ ++        +     +   M   G  P+V T
Sbjct: 128 FNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYT 187

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
             IL+NS C   RL  A  VL ++ ++GC+P+  T+N L++GLC  G++ EA  +     
Sbjct: 188 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 247

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
            +G +PDV TY  +M+G CKVG ++ A+ LL   +++   PNV+ +NT+ +  CK+    
Sbjct: 248 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 307

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   L   M  +   PD  +Y++L++ L    + +   ++  EMV      +  + ++++
Sbjct: 308 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 367

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
             LC     ++ ++  A+ V + M K+    D  TY  ++       + DEA+      +
Sbjct: 368 DALC-----KEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 422

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             G +P   ++N +I   C   ++DKA+ LL  M     I    +Y+ LI  L  + +  
Sbjct: 423 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 482

Query: 458 DACALYGAALKQGVIP 473
            A AL+   +  G IP
Sbjct: 483 HAIALFHEMVASGQIP 498



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 186/405 (45%), Gaps = 5/405 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +FD    +G    V  +  L+  L  +     A++           PN   ++ 
Sbjct: 236 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 295

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G  P++ T+  L+++LC     K    +L++M    
Sbjct: 296 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 355

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+  ++ ++  LC  G +  A++++  +   G++PDV TYTA+MDG C     +EA+
Sbjct: 356 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 415

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +  + +G  PNV ++N L NGYC+     K +GLL+ M  +  + D ++Y+TL++GL
Sbjct: 416 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 475

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+++ A+++F EMV  G   D      LL  LC     +   L +A  + + +    
Sbjct: 476 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLC-----KNHHLAEAMVLLKAIEGSN 530

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D   Y I I  + +  + + A     +    G  P   T+N +I  LC  G +D+A 
Sbjct: 531 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 590

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
            L   M E+        Y+ +I    +  +++ A  L    L +G
Sbjct: 591 KLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEG 635


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 198/368 (53%), Gaps = 7/368 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F++    G  P++ TF+ +I+  C K    +A    D +   G+H +  ++  L++
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIH 198

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK G  + AL++L ++     +PN+  YN ++  +C V  V EA+++   + + G+ P
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISP 258

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV TY+A++ GFC +G+ N+A++L N+ I   + P+V TFN L N +CK+G   +G  + 
Sbjct: 259 DVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-M 342
            +M K+   P+ ++Y++L++G     ++  A SIF  M + G   D +  + ++ G C +
Sbjct: 319 DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKI 378

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
           K ++E      A  +F++M +K  + D  TY  +I  L K  +   AL  +    + G  
Sbjct: 379 KKFDE------AMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P   T+N+++ ALC   ++DKA+ LL  + +    P+  +Y +LI  L Q  K  DA  +
Sbjct: 433 PTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKV 492

Query: 463 YGAALKQG 470
           +   L +G
Sbjct: 493 FEGLLVKG 500



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 198/406 (48%), Gaps = 5/406 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +F+ + +  T     +FN +L +LV      T +    +    G+ PN    +I+I
Sbjct: 68  DAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 127

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
            C+C       A  V   +   GY P+  TFT L+  LC  G++++A    D++  +G  
Sbjct: 128 NCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFH 187

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            +  +Y  L+ GLC VG    A ++L  V  + ++P+V  Y  ++D  CKV   NEA +L
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E I +G++P+VVT++ L +G+C  G     + L   M   N  PD  +++ L+N   K
Sbjct: 248 FSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCK 307

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK++   ++F  M++ G + +    NSL+ G C+     K     A  +F  M +    
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK-----AKSIFNTMAQGGVN 362

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  +Y I+I    K KK DEA+           IP  +T++++I  L   G+I  AL L
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +  M++    P+  +Y+ ++  L ++ +   A AL      +G+ P
Sbjct: 423 VDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQP 468



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 206/423 (48%), Gaps = 9/423 (2%)

Query: 57  FVDRIKASPLKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
           F   IK   LK +I       D +   G ++    +  L+  L  + E   A+       
Sbjct: 158 FTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVD 217

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
              + PN   ++ +I   C      EA  +   M   G  P+V T++ L++  C  G+L 
Sbjct: 218 GNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLN 277

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           +A+++ ++M     KP++ T+N L+   C  G+++E   +   +   G+KP+  TY ++M
Sbjct: 278 DAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           DG+C V   N+A  + N   + GV P++ +++ + NG+CK     + + L K M ++N +
Sbjct: 338 DGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNII 397

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD ++YS+L++GL K G+I  A+ +  +M   G     R  NS+L  LC     +K    
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDK---- 453

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A  +  K+  K    +  TY I+I+ L +  K ++A       +  GH     T+  +I
Sbjct: 454 -AIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMI 512

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           Q  C EG  ++AL LL  M ++  IP   +Y+++I  L + +++  A  L    + +GV 
Sbjct: 513 QGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVR 572

Query: 473 PQR 475
           P++
Sbjct: 573 PRQ 575



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 177/360 (49%), Gaps = 6/360 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + K   + E  D+F  +   G +  V  ++ L+    +L +   A+  
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F++     + P+ +TF+I++  +C      E + V D M   G  PN  T+  L++  C 
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              + +A  + + M + G  P+IQ+Y+ ++ G C + + +EA  +   +    + PDV T
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y++++DG  K GR + A++L+++  +RGV P + T+N++ +  CK     K + LL  +K
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLK 462

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            +   P+  +YS L+ GL + GK+  A  +F+ ++  G  ++      +++G C++    
Sbjct: 463 DKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEG--- 519

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
             L  +A  +  KM     + D  TY I+I +L K  + D A   L   I  G  PR I 
Sbjct: 520 --LFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 158/355 (44%), Gaps = 5/355 (1%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N  ++S     + + ND  +A  + + +      P    F  ++ SL KS      L + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            +M   G KPN+   N L+   C +G +  A+ +   +   G  PD  T+T ++ G C  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G+  +A    ++ +  G   + +++ TL +G CK G     + LL+ +      P+ + Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           +T+++ + K   +  A  +F EM+  G   D    ++L+ G C+        L DA  +F
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGK-----LNDAIDLF 283

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            KM  +    D  T+ I++    K  K  E        ++ G  P  +T+N+++   C  
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +++KA  +   M +    P   SY ++I    +++K  +A  L+    ++ +IP
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIP 398



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 5/252 (1%)

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           K +  +Y++    F      ++A+ L N  + R  TP    FN +     K       + 
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L + M+ R   P+ ++ + L+N   + G I  A S+F ++++ G+  D     +L++GLC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
           +K       ++ A+   +K+       D  +YG +I  L K  +T  AL  L        
Sbjct: 167 LKGQ-----IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLV 221

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P  + +N +I ++C    +++A  L   M      P   +Y  LI+    L K  DA  
Sbjct: 222 QPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAID 281

Query: 462 LYGAALKQGVIP 473
           L+   + + + P
Sbjct: 282 LFNKMILENIKP 293


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 193/380 (50%), Gaps = 5/380 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  ++F  +   G +  +S FN LL  L    + +   K   +    G+ PN +T++  I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFI 258

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           +  C K +   A +++  + D G  P+V T+  L+  LCK+ + +EA   L ++   G +
Sbjct: 259 QGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLE 318

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TYN L+ G C  G V+ A  +L+N   +G  PD +TY +++DG C  G +N A+ L
Sbjct: 319 PDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALAL 378

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            NEA+ +G+ PNV+ +NTL  G   +G  ++   L   M ++  +P+  +++ L+NGL K
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCK 438

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G +  A  + K M+  G+  D    N L+ G     +  +  +E+A ++ + M      
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHG-----YSTQLKMENALEILDVMMDNGVD 493

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  TY  ++  L K  K ++ +      +E G  P   TFN ++++LC   K+DKAL L
Sbjct: 494 PDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGL 553

Query: 428 LFLMYEHAKIPSRTSYDMLI 447
           L  M   +  P   ++  LI
Sbjct: 554 LEEMKNKSVNPDAVTFGTLI 573



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 178/351 (50%), Gaps = 4/351 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+  L    E   A+  F+EA   G+ PN   ++ +I+   N+    EA ++   M 
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMS 418

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  P V TF ILVN LCK G + +A  ++  M   G  P+I T+N L+ G     ++E
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A E+L  + ++G+ PDVYTY ++++G CK  +  + ME     +E+G  PN+ TFN L 
Sbjct: 479 NALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILL 538

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              C+     K +GLL+ MK ++  PD +++ TL++G  K G +  A ++F++M     E
Sbjct: 539 ESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME----E 594

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           V     ++    + + ++ EK  +  A ++F++M  +    D  TY +++    K    D
Sbjct: 595 VYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVD 654

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
                L   +E G IP   T   VI  LC E ++ +A  ++  M +   +P
Sbjct: 655 LGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 196/442 (44%), Gaps = 30/442 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   ++E +++F+ +       +V  +N ++  LV     + A K +      G+ P+ +
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F+I ++ +C  +    A ++++ M   G   NV  +  +V    +     E  E+  +M
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKM 207

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G    + T+N LL  LC  G V+E  ++L  V   G+ P+++TY   + G C+ G  
Sbjct: 208 LASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGEL 267

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ ++   I++G  P+VVT+N L  G CK     +    L  +      PD  +Y+TL
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTL 327

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-------------------- 341
           + G  K G ++ A  I    V  GF  DE    SL+ GLC                    
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 342 ----------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
                     +K    + L+ +A Q+  +M++K  + +  T+ I++  L K     +A  
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            +   I  G+ P   TFN +I     + K++ AL +L +M ++   P   +Y+ L+  L 
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLC 507

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           +  K  D    Y   +++G  P
Sbjct: 508 KTSKYEDVMETYKTMVEKGCAP 529



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 189/419 (45%), Gaps = 8/419 (1%)

Query: 58  VDRIKASPLKERIDIFDSIKK-DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA-SSYG 115
           V R +  P+K  +++F+S++K DG   ++S +  ++  L +  + E   +   +   + G
Sbjct: 13  VIRCQKDPMKA-LEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVG 71

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
                  +   ++ Y  K    EA  V + M      P V ++  +++ L  SG   +A 
Sbjct: 72  NHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAH 131

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           +V  +M   G  P++ ++   +K  C   R   A  +L N+ + G + +V  Y  V+ GF
Sbjct: 132 KVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
            +    +E  EL  + +  GV+  + TFN L +  CK+G   +   LL  + KR  LP+ 
Sbjct: 192 YEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNL 251

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
            +Y+  + GL + G++  AV +   ++  G + D    N L+ GLC  S       ++A 
Sbjct: 252 FTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSK-----FQEAE 306

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
               K+  +    D  TY  +I    KG     A   L +A+  G +P   T+ ++I  L
Sbjct: 307 VYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGL 366

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           C EG+ ++AL L          P+   Y+ LI  L       +A  L     ++G+IP+
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPE 425



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 114/235 (48%), Gaps = 5/235 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++  ++I D +  +G +  V  +N LL  L   ++ E  ++ +      G APN +TF+I
Sbjct: 477 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI- 184
           ++   C  +   +A  +++ M +   +P+  TF  L++  CK+G L  A  +  +M  + 
Sbjct: 537 LLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVY 596

Query: 185 --GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              C  +  TYN ++        V  A ++   + +  L PD YTY  ++DGFCK G  +
Sbjct: 597 MVSC--STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVD 654

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
              + L E +E G  P++ T   + N  C E    +  G++  M ++  +P+ ++
Sbjct: 655 LGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 177/363 (48%), Gaps = 40/363 (11%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           + +FN LL ++V + + ET V  F E    G+  N  T SI+I C+C  +       V  
Sbjct: 40  IIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFG 99

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
                G+ P+V  FT L++ +C+ G+ + A  +L +MG +GC P++ T N L++G C  G
Sbjct: 100 KTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQG 159

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           ++++  ++   + + GLKPDVY+Y+  ++G+CKV + +EAMEL +E   RGV PN VT+N
Sbjct: 160 KIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYN 219

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL    C+   P     L + M      PD ++YSTLL+G  K G +   + +F+EM R 
Sbjct: 220 TLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQR- 278

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
                                                  ++   D   Y I+I  + + +
Sbjct: 279 ---------------------------------------RLVKPDLVVYTIIINGMCRSR 299

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           K  +A   L   I  G  P   T+  ++  LC EG I +AL L   M E   +P   SY+
Sbjct: 300 KVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYN 359

Query: 445 MLI 447
           +L+
Sbjct: 360 VLL 362



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 133/293 (45%), Gaps = 35/293 (11%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F    K G    V  F  L+  +  + + E A     E    G  P+  T + ++R YC
Sbjct: 97  VFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYC 156

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           ++    + RK+   M   G  P+V +++I +N  CK  ++ EA+E+ D+M   G  PN  
Sbjct: 157 SQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAV 216

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE-------- 243
           TYN L+K LC   R  +A  +   +   GL PD+  Y+ ++DGFCK G  +E        
Sbjct: 217 TYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEM 276

Query: 244 ---------------------------AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                                      A E+L+  I  G+ P+V T+  L +G C+EG+ 
Sbjct: 277 QRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSI 336

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           ++ + L + M++  C+P   SY+ LL G L+       V +  EM   GF  D
Sbjct: 337 IEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYAD 389



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 120/244 (49%), Gaps = 2/244 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF  +   G    V  ++  +     + + + A++ F E S  G+ PN+ T++ +I+  C
Sbjct: 167 IFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALC 226

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A+ +   M   G  P++  ++ L++  CK G L E L +  +M R   KP++ 
Sbjct: 227 QALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLV 286

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            Y  ++ G+C   +V++A E+L  +  +GLKPDV+TYTA++DG C+ G   EA+ L  + 
Sbjct: 287 VYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKM 346

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            E G  P   ++N L  G  +       V L+  M  R    D ++  T L   L  G  
Sbjct: 347 EEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVT-RTFLKDFLP-GND 404

Query: 312 RPAV 315
            PA+
Sbjct: 405 SPAI 408



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 144/305 (47%), Gaps = 5/305 (1%)

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G L +AL   ++M     +P I  +N LL  +  + + E    +   ++  G+K +V T 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           + +++ FC +   +    +  + ++RG  P+VV F TL +G C+ G      GLLK M  
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
             C+PD ++ ++L+ G    GKI     IF  MV  G + D    +  + G C     + 
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYC-----KV 193

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
           + +++A ++F++M+ +  V +  TY  +I+ L +  +  +A +        G  P  + +
Sbjct: 194 EKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAY 253

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           + ++   C +G +D+ L+L   M      P    Y ++I  + +  K  DA  +    + 
Sbjct: 254 STLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIV 313

Query: 469 QGVIP 473
           +G+ P
Sbjct: 314 EGLKP 318



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 102/201 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +++FD +   G   +   +N L+ AL        A   F +  + GL+P+  
Sbjct: 192 KVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDIL 251

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +S ++  +C + +  E   +   M      P++  +TI++N +C+S ++K+A EVL ++
Sbjct: 252 AYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRL 311

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP++ TY  L+ GLC  G + EA  +   ++ DG  P   +Y  ++ G  +   +
Sbjct: 312 IVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDT 371

Query: 242 NEAMELLNEAIERGVTPNVVT 262
           +  ++L++E  +RG   + VT
Sbjct: 372 STVVQLIHEMADRGFYADAVT 392


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 195/393 (49%), Gaps = 13/393 (3%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           V  +N L+    +  E E A     E    YG+AP+  T ++++   C       A    
Sbjct: 94  VETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHF 153

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           +    NG   ++ T+T +V+ L K+ ++++A+ +++++   GC P I TYN LL GLC +
Sbjct: 154 ETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKM 213

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           GR+EEA ++L  + ++G  PDV TYT+++DG  K  RS EA +L  E   RG+  + V +
Sbjct: 214 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCY 273

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             L  G  + G   +   + K M  + C+PD ++ ST+++GL K G+I  AV IFK M  
Sbjct: 274 TALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA 333

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   +E + ++L+ GLC     +   ++ A ++  +M K     D  TY I+I  L K 
Sbjct: 334 RGLAPNEVVYSALIHGLC-----KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS 388

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
              + A       +E G  P   T+N ++   C  G  D A  +   M      P+  +Y
Sbjct: 389 GDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTY 448

Query: 444 DMLITKL---DQLEKSYDACALYGAALKQGVIP 473
             LI+ L    QL K+    +LY   +K+   P
Sbjct: 449 GTLISGLCKRRQLTKA----SLYFQHMKERGCP 477



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 197/410 (48%), Gaps = 6/410 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  +   +D F++   +G    +  +  ++  L    + + AV    + ++ G  P   
Sbjct: 142 KSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIA 201

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C      EA  ++  + DNG  P+V T+T L++ L K  R  EA ++  +M
Sbjct: 202 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 261

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +   Y  L++GL   G++ +A  +   + + G  PDV T + ++DG CK GR 
Sbjct: 262 ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 321

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+ +      RG+ PN V ++ L +G CK       + +L  MKK  C PD I+Y+ L
Sbjct: 322 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 381

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K G +  A + F EM+  G + D    N L+ G C     +      A  VF+ M
Sbjct: 382 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDA-----ACGVFDDM 436

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           +      +  TYG +I  L K ++  +A ++  H  E G  P +  +++++  LC  GK+
Sbjct: 437 SSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKL 496

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           +    +LF   E + + +  +   LI  L +  +  +A +L+ A  K+G+
Sbjct: 497 EGG-CMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 545



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 174/361 (48%), Gaps = 7/361 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E ID+   I  +G    V  +  L+  L        A K F E +  GL  ++ 
Sbjct: 212 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTV 271

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +IR         +A  V   M   G  P+V T + +++ LCK+GR+  A+ +   M
Sbjct: 272 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 331

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN   Y+ L+ GLC   +++ A EML  +K     PD  TY  ++DG CK G  
Sbjct: 332 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 391

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A    +E +E G  P+V T+N L +G+CK G      G+   M   +C P+ ++Y TL
Sbjct: 392 EAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTL 451

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K  ++  A   F+ M   G   D  + +SL+ GLC KS +    LE    +F++M
Sbjct: 452 ISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLC-KSGK----LEGGCMLFDEM 506

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            ++  V +  T   +I  L K  + DEA + L +AI    +P    +N++I  L    K+
Sbjct: 507 -ERSGVANSQTRTRLIFHLCKANRVDEA-VSLFNAIRKEGMPHPYAYNSIISTLIKSAKV 564

Query: 422 D 422
           +
Sbjct: 565 N 565



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 165/385 (42%), Gaps = 76/385 (19%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G+  +V T   L++   ++ R +EA  +L         P+++T+N L+ G C     EEA
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 210 YEMLMNVKND-GLKP-----------------------------------DVYTYTAVMD 233
           + ++  ++ D G+ P                                   D++TYTA++D
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 234 -----------------------------------GFCKVGRSNEAMELLNEAIERGVTP 258
                                              G CK+GR  EA++LL + ++ G TP
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           +VVT+ +L +G  KE    +   L K M  R  + D + Y+ L+ GLL+ GKI  A S++
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           K M   G   D   +++++ GLC     +   +  A ++F+ M  +    +   Y  +I 
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLC-----KAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 348

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L K +K D AL  L    +    P TIT+N +I  LC  G ++ A      M E    P
Sbjct: 349 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 408

Query: 439 SRTSYDMLITKLDQLEKSYDACALY 463
              +Y++L++   +   +  AC ++
Sbjct: 409 DVYTYNILVSGFCKAGNTDAACGVF 433



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 1/266 (0%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++A  + +   ++ ++   G    V   + ++  L        AV+ F    + GLAPN 
Sbjct: 281 LQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNE 340

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             +S +I   C       A +++  M      P+  T+ IL++ LCKSG ++ A    D+
Sbjct: 341 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 400

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GCKP++ TYN L+ G C  G  + A  +  ++ +    P+V TY  ++ G CK  +
Sbjct: 401 MLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQ 460

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A        ERG  P+   +++L +G CK G    G  L   M +R+ + +  + + 
Sbjct: 461 LTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM-ERSGVANSQTRTR 519

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGF 326
           L+  L K  ++  AVS+F  + + G 
Sbjct: 520 LIFHLCKANRVDEAVSLFNAIRKEGM 545



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 127/309 (41%), Gaps = 41/309 (13%)

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           R G + ++ T N LL       R  EA  +L N       PDV T+  ++ G+C      
Sbjct: 52  RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111

Query: 243 EAMELLNEAIER-GVTPNVVTFNTLFNGYCKEGTPMK----------------------- 278
           EA  ++ E  E  GV P++ T N + +G CK G  +                        
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171

Query: 279 ------------GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
                        V L++ +    C P   +Y+ LLNGL K G++  A+ + +++V  G 
Sbjct: 172 VDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 231

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             D     SL+ GL     +EK   E AY++F++M  +  V D   Y  +IR L +  K 
Sbjct: 232 TPDVVTYTSLIDGL----GKEKRSFE-AYKLFKEMALRGLVLDTVCYTALIRGLLQAGKI 286

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +A          G +P  +T + +I  LC  G+I  A+ +   M      P+   Y  L
Sbjct: 287 PQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 346

Query: 447 ITKLDQLEK 455
           I  L +  K
Sbjct: 347 IHGLCKARK 355



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 8/256 (3%)

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G +  V+T  A++D F +  R  EA  LL   +     P+V T+N L  GYC    P + 
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 280 VGLLKLMKKR-NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
             +++ M++     P   +++ +L+GL K GK+  A+  F+     G  +D     +++ 
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV- 172

Query: 339 GLCMKSWEEKD-LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
                 W  K+  ++DA  + EK+T         TY  ++  L K  + +EA+  L   +
Sbjct: 173 -----DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 227

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
           + G  P  +T+ ++I  L  E +  +A  L   M     +     Y  LI  L Q  K  
Sbjct: 228 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIP 287

Query: 458 DACALYGAALKQGVIP 473
            A ++Y     QG +P
Sbjct: 288 QASSVYKTMTSQGCVP 303


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 197/404 (48%), Gaps = 6/404 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++FD ++  G       +  + +A   +       ++  +    G   ++ T ++MI  +
Sbjct: 217 NVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTF 276

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C K          D   + G  PN+  FT L+N LCK G +K+A E+L++M + G KPN+
Sbjct: 277 CEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNV 336

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
            T+  L+ GLC  G  E+A+ + +  V++D  KP+V+TYT+++ G+CK  + N A  LL+
Sbjct: 337 YTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLS 396

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
              E+G+ PN  T+  L +G+ K G   K   L+ LM K     +  +Y+  ++ L K G
Sbjct: 397 RMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKG 456

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           +   A  + K+  R G + D      L+  LC ++   + L+      F KM K     D
Sbjct: 457 RFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALV-----FFSKMFKAGVQPD 511

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  +I    + ++ +E+      A+ +G +P   T+ ++I   C +  +  AL    
Sbjct: 512 MHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFN 571

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M +H   P   +Y  LI+ L +  K  +AC LY A + +G+ P
Sbjct: 572 RMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSP 615



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 167/374 (44%), Gaps = 41/374 (10%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F E    G+ P+S ++ +M   YC      +  + +  M   G+  +  T T++++
Sbjct: 215 AENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMIS 274

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           + C+ G         D+   +G KPN+  +  L+ GLC  G +++A+EML  +   G KP
Sbjct: 275 TFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKP 334

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERG-VTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           +VYT+TA++DG CK G + +A  L  + +      PNV T+ ++ +GYCKE    +   L
Sbjct: 335 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEML 394

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L  MK++  +P+  +Y+ L++G  K G                                 
Sbjct: 395 LSRMKEQGLVPNTKTYTCLIDGHSKAGN-------------------------------- 422

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
                    E AY++ + M K+    +  TY   I +L K  +  EA   L     +G  
Sbjct: 423 --------FEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQ 474

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
             T+T+  +I  LC      +AL+    M++    P   +Y+ LI    +  +  ++  L
Sbjct: 475 ADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKL 534

Query: 463 YGAALKQGVIPQRK 476
           +  A+  G++P ++
Sbjct: 535 FAEAVGLGLVPTKE 548



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 162/357 (45%), Gaps = 6/357 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FD   + G   ++ +F  L+  L      + A +   E    G  PN +T + +I   C 
Sbjct: 289 FDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCK 348

Query: 133 KNDFFEA-RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           K    +A R  +  +  + Y PNV T+T +++  CK  +L  A  +L +M   G  PN +
Sbjct: 349 KGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTK 408

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY CL+ G    G  E+AYE++  +  +G   +++TY A +D  CK GR  EA +LL + 
Sbjct: 409 TYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKG 468

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              G+  + VT+  L +  C+     + +     M K    PD  +Y+TL+    +  ++
Sbjct: 469 FRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRM 528

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             +  +F E V  G    +    S++ G C     ++++   A + F +M+      D  
Sbjct: 529 EESEKLFAEAVGLGLVPTKETYTSMICGYC----RDRNV-SLALKFFNRMSDHGCTPDSL 583

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           TYG +I  L K  K DEA       ++ G  P  +T   +    C +     A+++L
Sbjct: 584 TYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVIL 640



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 151/323 (46%), Gaps = 8/323 (2%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++ D    +V  +  ++      ++   A    S     GL PN+ T++ +I  +    +
Sbjct: 363 VRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGN 422

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           F +A +++D M   G+  N+ T+   ++SLCK GR  EA ++L +  R+G + +  TY  
Sbjct: 423 FEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTI 482

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+  LC      EA      +   G++PD++TY  ++  F +  R  E+ +L  EA+  G
Sbjct: 483 LISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLG 542

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           + P   T+ ++  GYC++      +     M    C PD ++Y  L++GL K  K+  A 
Sbjct: 543 LVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEAC 602

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +++ MV  G    E    +L    C     ++D    A  + E++ KK+ +    T   
Sbjct: 603 QLYEAMVDKGLSPCEVTRLTLAYEYC-----KQDDSATAMVILERLDKKLWIR---TVNT 654

Query: 376 VIRTLGKGKKTDEALIHLHHAIE 398
           +IR L   +K   A++  H  ++
Sbjct: 655 LIRKLCSERKVGMAVLFFHKLLD 677



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 126/261 (48%), Gaps = 3/261 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA   ++  ++ D + K+G + ++  +N  + +L        A K   +    GL  ++ 
Sbjct: 419 KAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTV 478

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I   C + D  EA      MF  G  P++ T+  L+ +  +  R++E+ ++  + 
Sbjct: 479 TYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEA 538

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G  P  +TY  ++ G C    V  A +    + + G  PD  TY A++ G CK  + 
Sbjct: 539 VGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKL 598

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA +L    +++G++P  VT  TL   YCK+      + +L+ + K+  +    + +TL
Sbjct: 599 DEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLWIR---TVNTL 655

Query: 302 LNGLLKWGKIRPAVSIFKEMV 322
           +  L    K+  AV  F +++
Sbjct: 656 IRKLCSERKVGMAVLFFHKLL 676



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 130/278 (46%), Gaps = 9/278 (3%)

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           +  +C+++    +G+ +EA  M++ ++N GL   V T   V     ++G    A  + +E
Sbjct: 162 EVMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDE 221

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
              RGV P+ V++  +   YC+ G        LK M +R  + D  + + +++   + G 
Sbjct: 222 MRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGF 281

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
                  F + V  G + +     SL+ GLC     ++  ++ A+++ E+M KK    + 
Sbjct: 282 ASRVFWYFDKWVELGLKPNLINFTSLINGLC-----KRGSIKQAFEMLEEMVKKGWKPNV 336

Query: 371 GTYGIVIRTLGKGKKTDEAL-IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
            T+  +I  L K   T++A  + L       + P   T+ ++I   C E K+++A +LL 
Sbjct: 337 YTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLS 396

Query: 430 LMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYG 464
            M E   +P+  +Y  LI   +K    EK+Y+   L G
Sbjct: 397 RMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMG 434


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 183/368 (49%), Gaps = 6/368 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   + D +   G    +  +N ++  L    + E A  +  E    GL P++ TF  
Sbjct: 201 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 260

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            I  Y       EA K  D M D+G  PN   +T+L+N   K+G L EAL +   +  +G
Sbjct: 261 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 320

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++QT +  + GL   GRV+EA ++   +K  GL PDV+TY++++ GFCK G   +A 
Sbjct: 321 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 380

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           EL +E   +G+ PN+  +N L +G CK G   +   L   M ++   PD ++YST+++G 
Sbjct: 381 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 440

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K   +  A S+F EM   G +    + N+L+ G C    +E D +E A  +F +M +K 
Sbjct: 441 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCC----KEGD-MEKAMNLFREMLQKG 495

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
             T   ++  +I    K  K  EA       I    +P  +T+  VI   C  GK+++A 
Sbjct: 496 FATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 554

Query: 426 LLLFLMYE 433
           LL   M E
Sbjct: 555 LLFKEMQE 562



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 195/415 (46%), Gaps = 7/415 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   + E + I D +   G   ++  +N L+  L    + E A +      + G  PNS
Sbjct: 56  MREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNS 115

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF ++I  YC +++   A +++D M      P+  ++  ++N LC    L  A ++L++
Sbjct: 116 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 175

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G KPN+  Y+ L+ G    GR+EEA  +L  +   G+ PD++ Y A++    K G+
Sbjct: 176 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 235

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA   L E   RG+ P+ VTF     GY K G   +       M     +P+   Y+ 
Sbjct: 236 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 295

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NG  K G +  A+SIF+ +   G   D +  ++ + GL +K+      +++A +VF +
Sbjct: 296 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGL-LKNGR----VQEALKVFSE 350

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-GHIPRTITFNNVIQALCGEG 419
           + +K  V D  TY  +I    K  + ++A   LH  + + G  P    +N ++  LC  G
Sbjct: 351 LKEKGLVPDVFTYSSLISGFCKQGEVEKAF-ELHDEMCLKGIAPNIFIYNALVDGLCKSG 409

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            I +A  L   M E    P   +Y  +I    + E   +A +L+     +GV P 
Sbjct: 410 DIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 464



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 184/402 (45%), Gaps = 31/402 (7%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++   E     L P++ ++  MI   C+  D   A K+++ M  +G  PNV  ++ L+ 
Sbjct: 134 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIM 193

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
                GR++EA  +LD M   G  P+I  YN ++  L   G++EEA   L+ ++  GLKP
Sbjct: 194 GYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 253

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D  T+ A + G+ K G+  EA +  +E ++ G+ PN   +  L NG+ K G  M+ + + 
Sbjct: 254 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 313

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           + +     LPD  + S  ++GLLK G+++ A+ +F E+   G   D    +SL+ G C +
Sbjct: 314 RHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 373

Query: 344 SWEEKDL------------------------------LEDAYQVFEKMTKKVSVTDPGTY 373
              EK                                ++ A ++F+ M +K    D  TY
Sbjct: 374 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 433

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             +I    K +   EA    H     G  P +  +N ++   C EG ++KA+ L   M +
Sbjct: 434 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 493

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
                +  S++ LI    +  K  +A  L+   + + ++P  
Sbjct: 494 KG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDH 534



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 175/369 (47%), Gaps = 11/369 (2%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F E    GL P+    S +I  +  + D  E  ++ D M   G   N+ T+ +L++ LCK
Sbjct: 33  FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 92

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G++++A E+L  M  +GCKPN +T+  L++G C    +  A E+L  ++   L P   +
Sbjct: 93  FGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 152

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y A+++G C     + A +LL +    G+ PNVV ++TL  GY  EG   +   LL  M 
Sbjct: 153 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 212

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
                PD   Y+ +++ L K GK+  A +   E+   G + D     + + G     + +
Sbjct: 213 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG-----YSK 267

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
              + +A + F++M     + +   Y ++I    K     EAL    H   +G +P   T
Sbjct: 268 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQT 327

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT---KLDQLEKSYDACALYG 464
            +  I  L   G++ +AL +   + E   +P   +Y  LI+   K  ++EK+++   L+ 
Sbjct: 328 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE---LHD 384

Query: 465 AALKQGVIP 473
               +G+ P
Sbjct: 385 EMCLKGIAP 393



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 175/364 (48%), Gaps = 24/364 (6%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   ++E + +F  +K+ G    V  ++ L+       E E A +   E    G+APN 
Sbjct: 336 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 395

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           + ++ ++   C   D   ARK+ D M + G  P+  T++ +++  CKS  + EA  +  +
Sbjct: 396 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 455

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G +P+   YN L+ G C  G +E+A  +   +   G    + ++  ++DG+CK  +
Sbjct: 456 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCK 514

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA +L  E I + + P+ VT+ T+ + +CK G   +   L K M++RN + D +    
Sbjct: 515 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV---- 570

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
                          ++F++MV  G + DE     +  GL + +  ++D L +A+++ ++
Sbjct: 571 --------------FALFEKMVAKGVKPDE-----VTYGLVIYAHCKEDNLVEAFKLRDE 611

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           +  K  +T    + ++I  L K +   EA   L    E+G  P     + ++++    GK
Sbjct: 612 VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGK 671

Query: 421 IDKA 424
           +D+A
Sbjct: 672 MDEA 675



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 155/328 (47%), Gaps = 5/328 (1%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M + G  PN  T+TI+   LC++ R+ EA    ++M + G KP+    + L+ G    G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++E   +   + + G+  ++ TY  ++ G CK G+  +A E+L   I  G  PN  TF  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L  GYC+E    + + LL  M+KRN +P  +SY  ++NGL     +  A  + ++M   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            + +  + ++L+ G     +  +  +E+A ++ + M+      D   Y  +I  L K  K
Sbjct: 181 LKPNVVVYSTLIMG-----YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 235

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            +EA  +L      G  P  +TF   I      GK+ +A      M +H  +P+   Y +
Sbjct: 236 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 295

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           LI    +     +A +++      GV+P
Sbjct: 296 LINGHFKAGNLMEALSIFRHLHALGVLP 323



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 122/295 (41%), Gaps = 18/295 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  ++    +FD + + G       ++ ++           A   F E  S G+ P+S+
Sbjct: 407 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 466

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ ++   C + D  +A  +   M   G+   ++ F  L++  CKS +++EA ++  +M
Sbjct: 467 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEM 525

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEA-----------------YEMLMNVKNDGLKPD 224
                 P+  TY  ++   C  G++EEA                 + +   +   G+KPD
Sbjct: 526 IAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPD 585

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
             TY  V+   CK     EA +L +E + +G+       + L    CK     +   LL 
Sbjct: 586 EVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLD 645

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
            M +    P   + STL+    + GK+  A  +F+ +   G   D   +  L+ G
Sbjct: 646 EMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 80/151 (52%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           +T    F +  + G+ P+  T+ ++I  +C +++  EA K+ D +   G     T   +L
Sbjct: 568 DTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLL 627

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + +LCK   L EA ++LD+MG +G KP++   + L++     G+++EA  +   VK+ GL
Sbjct: 628 ITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGL 687

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
            PD  T   +++G      S +A  L+ + +
Sbjct: 688 VPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 122/292 (41%), Gaps = 19/292 (6%)

Query: 49  PRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+     +D   K+  + E   +F  +   G       +N L+       + E A+  
Sbjct: 428 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 487

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F E    G A  + +F+ +I  YC      EA ++   M      P+  T+T +++  CK
Sbjct: 488 FREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 546

Query: 168 SGRLKEA-----------------LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           +G+++EA                   + ++M   G KP+  TY  ++   C    + EA+
Sbjct: 547 AGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 606

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           ++   V   G+      +  ++   CK     EA +LL+E  E G+ P++   +TL   +
Sbjct: 607 KLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSF 666

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
            + G   +   + + +K    +PD  +   L+NG L       A ++ K++V
Sbjct: 667 HEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 215/413 (52%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+   L + +D+F  + +     S++DF+ LL A+  + + +  +  + +    G+  N 
Sbjct: 57  IRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T +I++ C+C  +    A   +  M   G+ P++ TF  L+N  C+  R+ +AL + D+
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDR 176

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M  +G +PN+  YN ++ GLC   +V+ A ++L  ++ DG++PD  TY +++ G C  GR
Sbjct: 177 MVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGR 236

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++A  +++   +R + P+V TFN L +   KEG   +   L + M +R+  PD ++YS 
Sbjct: 237 WDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSL 296

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+ GL  + ++  A  +F  MV  G   D    + L+ G C     +   +E   ++F +
Sbjct: 297 LIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYC-----KSKKVEHGMKLFCE 351

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M+++  V +  TY ++I+   +  K + A       +  G  P  IT+N ++  LC  GK
Sbjct: 352 MSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGK 411

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           I+KAL++L  M +        +Y+++I  + +  +  DA  LY +   +G+ P
Sbjct: 412 IEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTP 464



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 197/404 (48%), Gaps = 5/404 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +++ ++  G   ++   N LL      ++   A+ F  +    G  P+  TF  ++  
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNG 160

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C  +  ++A  + D M + GY PNV  +  +++ LCKS ++  AL++L++M   G +P+
Sbjct: 161 FCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPD 220

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L+ GLC  GR ++A  M+  +    + PDV+T+ A++D   K GR +EA EL  
Sbjct: 221 AVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYE 280

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E I R + P++VT++ L  G C      +   +   M  + C PD ++YS L+NG  K  
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSK 340

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K+   + +F EM + G   +      L++G C         L  A ++F+ M       +
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYC-----RAGKLNVAEEIFKWMVFCGVPPN 395

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY +++  L    K ++AL+ L    + G     +T+N +I+ +C  G++  A  L  
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYC 455

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +      P   +Y  ++  L +     +A AL+    + G++P
Sbjct: 456 SLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILP 499



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 159/335 (47%), Gaps = 40/335 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   + + + +FD + + G   +V  +N ++  L    + + A+   +     G+ P++ 
Sbjct: 163 RGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAV 222

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   CN   + +A +++ CM     +P+V TF  L+++  K GR+ EA E+ ++M
Sbjct: 223 TYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEM 282

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R    P+I TY+ L+ GLC   R++EA +M   + + G  PDV TY+ +++G+CK  + 
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342

Query: 242 NEAMELLNEAIERGVT-----------------------------------PNVVTFNTL 266
              M+L  E  +RGV                                    PN++T+N L
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVL 402

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G C  G   K + +L  M+K     D ++Y+ ++ G+ K G++  A  ++  +   G 
Sbjct: 403 LHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGL 462

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
             D     +++ GL      +K L  +A  +F KM
Sbjct: 463 TPDIWTYTAMMLGL-----YKKGLRGEADALFRKM 492



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 119/235 (50%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   + E  ++++ + +   +  +  ++ L+  L M +  + A + F    S G  P+ 
Sbjct: 267 VKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDV 326

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+SI+I  YC         K+   M   G   N  T+T+L+   C++G+L  A E+   
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKW 386

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  PNI TYN LL GLC  G++E+A  +L +++  G+  D+ TY  ++ G CK G 
Sbjct: 387 MVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGE 446

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
             +A +L      +G+TP++ T+  +  G  K+G   +   L + MK+   LP++
Sbjct: 447 VADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 123/246 (50%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  FN L+ A V       A + + E     L P+  T+S++I   C  +   EA ++  
Sbjct: 256 VFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFG 315

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G  P+V T++IL+N  CKS +++  +++  +M + G   N  TY  L++G C  G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAG 375

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           ++  A E+   +   G+ P++ TY  ++ G C  G+  +A+ +L +  + G+  ++VT+N
Sbjct: 376 KLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYN 435

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            +  G CK G       L   +  +   PD  +Y+ ++ GL K G    A ++F++M   
Sbjct: 436 IIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKED 495

Query: 325 GFEVDE 330
           G   +E
Sbjct: 496 GILPNE 501


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 227/505 (44%), Gaps = 90/505 (17%)

Query: 48  NPRSLQAQRFVDRIKASPL-KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           N   LQ  R     KAS + +E ID   S + D   +++     LL  L   N+ E A K
Sbjct: 11  NKLLLQLTREHRHDKASAVFQEMID--KSCQPDAFTFAI-----LLRGLCRSNQLEKARK 63

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
                   G  P+   ++ +I  Y    DF +A K +  M  N   P V T+T +V+ LC
Sbjct: 64  LLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLC 123

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG------ 220
           K+ R ++A+++LD+M   GC PNI TYN +++GLC   +++EA +ML  +   G      
Sbjct: 124 KAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV 183

Query: 221 --------------------------LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
                                     + PDV +YT V++G CK G  + A  +L+    R
Sbjct: 184 TYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNR 243

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           G TP+VVT+++L +G+CK G   + +GLL  M K  C P+ ++Y++LL  L + G I  A
Sbjct: 244 GCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKA 303

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK---------- 364
             +  EM R GF  D    N+ + GLC     + + ++ A  VF++M ++          
Sbjct: 304 EDMLVEMERRGFTPDVVSYNACIDGLC-----KAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEAL---------------------------------- 390
           + + D   Y +++  L KG + DEA                                   
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK 418

Query: 391 -IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
            + +H  +   +    +T+N ++  LC + ++  A  +L  M +   IP   +Y  L+  
Sbjct: 419 ALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 478

Query: 450 LDQLEKSYDACALYGAALKQGVIPQ 474
           + +  KS  A  L+  A+K G +P 
Sbjct: 479 MCKCGKSAAALELFEEAVKGGCVPD 503



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 196/405 (48%), Gaps = 20/405 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   + + +   G    V  +N  +  L   +  + A KF +      + P+  +++ 
Sbjct: 163 LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTT 219

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C   D   A +++D M + G  P+V T++ L++  CK G ++ A+ +LD M ++G
Sbjct: 220 VINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 279

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C+PN+  YN LL  L  +G + +A +ML+ ++  G  PDV +Y A +DG CK  R  +A 
Sbjct: 280 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 339

Query: 246 ELLNEAIERGVTPN----------VVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPD 294
            + +  +ERG TPN          ++ +  L +G CK G   +   L  K++ ++ C PD
Sbjct: 340 AVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPD 399

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
              Y+ +L+   K  +I  A+ I K+M+      +    N L+ GLC+      D L DA
Sbjct: 400 VFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVD-----DRLSDA 453

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
             +   M  +  + D  TYG ++  + K  K+  AL     A++ G +P  +T++ +I  
Sbjct: 454 ETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITG 513

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           L  E   ++A LL   + E   +P   +  +L  KL  L K   A
Sbjct: 514 LVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKPRKA 558



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 204/434 (47%), Gaps = 45/434 (10%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  + +++  L        AVK   E    G +PN +T+++++   C +    EA+K++
Sbjct: 111 TVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 170

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           + M   GY P+V T+   +  LCK  R+ EA + L    R+   P++ +Y  ++ GLC  
Sbjct: 171 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFL---ARMPVTPDVVSYTTVINGLCKS 227

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G ++ A  ML ++ N G  PDV TY++++DGFCK G    AM LL+  ++ G  PN+V +
Sbjct: 228 GDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAY 287

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L     + G   K   +L  M++R   PD +SY+  ++GL K  +++ A ++F  MV 
Sbjct: 288 NSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVE 347

Query: 324 FG----------FEVDERMMNSLLRGLC-------------------------------M 342
            G            VD  +   LL GLC                               +
Sbjct: 348 RGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVML 407

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
            S  ++  ++ A Q+ ++M +K +  +  T+ I++  L    +  +A   L   ++ G I
Sbjct: 408 DSHCKRRQIDKALQIHKQMLEK-NCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFI 466

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P  +T+  ++ A+C  GK   AL L     +   +P   +Y  LIT L     + +A  L
Sbjct: 467 PDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLL 526

Query: 463 YGAALKQGVIPQRK 476
           +   +++  +P  K
Sbjct: 527 FTKLVERRWVPDDK 540



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 192/405 (47%), Gaps = 24/405 (5%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   +V  +N LL+ L   +  + A   F E       P+++TF+I++R  C  N   +A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
           RK++  M + G  P+   +  L++   K+    +A + L +M +  C P + TY  ++ G
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC   R  +A ++L  +++ G  P++YTY  +++G C+  + +EA ++L E   RG  P+
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VVT+N+   G CK     +     K + +    PD +SY+T++NGL K G +  A  +  
Sbjct: 182 VVTYNSFIKGLCKCDRVDEA---RKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV--- 376
            M   G   D    +SL+ G C K  E    +E A  + + M K     +   Y  +   
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFC-KGGE----VERAMGLLDSMLKLGCRPNMVAYNSLLGA 293

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +  LG   K ++ L+ +      G  P  +++N  I  LC   ++ KA  +   M E   
Sbjct: 294 LHRLGHIGKAEDMLVEMERR---GFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGC 350

Query: 437 IPSRTSYDMLITK-------LDQLEKSY---DACALYGAALKQGV 471
            P+ +SY MLI         LD L K     +ACAL+   L + +
Sbjct: 351 TPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI 395



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 181/359 (50%), Gaps = 8/359 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G   N +T++ ++     ++   +A  V   M D    P+  TF IL+  LC+S +L++A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            ++L +M  +GC P+   YN L+ G        +A++ L  +  +   P V TYT ++DG
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK  R+ +A++LL+E  ++G +PN+ T+N +  G C+E    +   +L+ M  R   PD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++Y++ + GL K  ++  A    K + R     D     +++ GLC KS +    L+ A
Sbjct: 182 VVTYNSFIKGLCKCDRVDEA---RKFLARMPVTPDVVSYTTVINGLC-KSGD----LDSA 233

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++ + M+ +    D  TY  +I    KG + + A+  L   +++G  P  + +N+++ A
Sbjct: 234 SRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGA 293

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L   G I KA  +L  M      P   SY+  I  L + E+   A A++   +++G  P
Sbjct: 294 LHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP 352



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 133/290 (45%), Gaps = 8/290 (2%)

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
           +G + N+ TYN LL  L    R ++A  +   + +   +PD +T+  ++ G C+  +  +
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A +LL    E G  P+   +N L +GY K     +    L  M K +CLP  ++Y+ +++
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL K  + R AV +  EM   G   +    N ++ GLC     E+  L++A ++ E+M  
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLC-----EERKLDEAKKMLEEMAV 175

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           +    D  TY   I+ L K  + DEA   L     M   P  +++  VI  LC  G +D 
Sbjct: 176 RGYFPDVVTYNSFIKGLCKCDRVDEARKFL---ARMPVTPDVVSYTTVINGLCKSGDLDS 232

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A  +L  M      P   +Y  LI    +  +   A  L  + LK G  P
Sbjct: 233 ASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRP 282



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 144/308 (46%), Gaps = 18/308 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++  + + DS+ K G   ++  +N LL AL  L     A     E    G  P+  
Sbjct: 261 KGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVV 320

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF----------TILVNSLCKSGRL 171
           +++  I   C      +A+ V D M + G  PN +++          T+L++ LCK GR 
Sbjct: 321 SYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRF 380

Query: 172 KEAL----EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            EA     +VLD+  +I C+P++  YN +L   C   ++++A ++   +       +V T
Sbjct: 381 DEACALFSKVLDE--KI-CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVT 436

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           +  ++ G C   R ++A  +L   ++ G  P+ VT+ TL +  CK G     + L +   
Sbjct: 437 WNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAV 496

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           K  C+PD ++YS L+ GL+       A  +F ++V   +  D++ +  L R L + +   
Sbjct: 497 KGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKPR 556

Query: 348 KDLLEDAY 355
           K  + D Y
Sbjct: 557 KAEVVDLY 564


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 223/447 (49%), Gaps = 55/447 (12%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  +   G + ++  F  L+       +   A++F      + +AP+ + F+ +I    
Sbjct: 49  VYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLF 108

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK--PN 189
              +  +A K+ + M  +  +P++ T+  +++ LCKSG L++A E+L++M R G K  P+
Sbjct: 109 KDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPD 168

Query: 190 IQTYNCLLK-GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           I TYN L+  G+C  G VEEA E+L  +K  G  PDV TY +++   C  GR  EA E+L
Sbjct: 169 IVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEIL 228

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
                   +P++VTFNTL +G+CK G   + + +L+ M + N LPD I+Y+ L+NGL + 
Sbjct: 229 KTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRV 285

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK---- 364
           G+++ A  + +E+VR G+  D     SL+ GLC KS E    +E+A+++ ++M+ +    
Sbjct: 286 GQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC-KSGE----IEEAHKLVKEMSAREILA 340

Query: 365 ----VSVTDP-GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE- 418
               +++  P  TY IV+  L K     +A+  +   +  G++P  +T+N +I  LC   
Sbjct: 341 EMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKAN 400

Query: 419 ----------------------------------GKIDKALLLLFLMYEHAKIPSRTSYD 444
                                             G++D A  L+  M      P+   Y 
Sbjct: 401 RVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYT 460

Query: 445 MLITKLDQLEKSYDACALYGAALKQGV 471
            LI  L + ++  DAC +  A   QGV
Sbjct: 461 SLIDGLCKSDRMDDACVVLDAMRGQGV 487



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 204/419 (48%), Gaps = 20/419 (4%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG--LAPNSWTFSI 125
           + + +F++++    N  +  +N ++  L      E A +   E    G   AP+  T++ 
Sbjct: 115 QAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNT 174

Query: 126 MIRC-YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           +I    C   D  EA +++D M   G  P+V T+  ++++LC +GR+ EA E+L  M   
Sbjct: 175 LINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS-- 232

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
            C P++ T+N LL G C  G +  A E+L  +  + + PDV TYT +++G C+VG+   A
Sbjct: 233 -CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVA 291

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR---------NCLPDK 295
             LL E + +G  P+V+ + +L +G CK G   +   L+K M  R         N +P  
Sbjct: 292 FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPL 351

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
            +Y+ +L GL+K G I  AVS+  ++V  G+  D    N+L+ GLC     + + + +A 
Sbjct: 352 FTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC-----KANRVREAC 406

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            + ++M       +  T G V+  L +  + D+A   +       H P  + + ++I  L
Sbjct: 407 DLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGL 466

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           C   ++D A ++L  M          +Y  LI  +    +  +A A+Y   + +G +P 
Sbjct: 467 CKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPD 525



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 187/386 (48%), Gaps = 21/386 (5%)

Query: 102 ETAVKFFSEASSY-GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           + A++FF  A    G   +  +++ ++         F   KV   +  +G  PN+ TF I
Sbjct: 8   DLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKI 67

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+   CK+G+   ALE L  +      P++  +N L+ GL   G  ++A ++  N+++  
Sbjct: 68  LIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSR 127

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG--VTPNVVTFNTLFN-GYCKEGTPM 277
           + PD++TY  V+ G CK G   +A ELL E I RG    P++VT+NTL N G CK+G   
Sbjct: 128 VNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVE 187

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           + + +L  MK     PD I+Y+++++ L   G++  A  I K M       D    N+LL
Sbjct: 188 EALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLL 244

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            G C     +  +L  A +V E+M ++  + D  TY I++  L +  +   A   L   +
Sbjct: 245 DGFC-----KAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 299

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLL---------LFLMYEHAKIPSRTSYDMLIT 448
             G+IP  I + +++  LC  G+I++A  L         L  M     +P   +Y++++ 
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLG 359

Query: 449 KLDQLEKSYDACALYGAALKQGVIPQ 474
            L +      A +L    + +G +P 
Sbjct: 360 GLIKDGSISKAVSLISDLVARGYVPD 385



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 178/362 (49%), Gaps = 17/362 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E ++I D +K  G    V  +N ++ AL +      A +     S    +P+  
Sbjct: 182 KDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSC---SPDLV 238

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ ++  +C       A +V++ M      P+V T+TILVN LC+ G+++ A  +L+++
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAY---------EMLMNVKNDGLKPDVYTYTAVM 232
            R G  P++  Y  L+ GLC  G +EEA+         E+L  + +  + P ++TY  V+
Sbjct: 299 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVL 358

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
            G  K G  ++A+ L+++ + RG  P+VVT+NTL +G CK     +   L   M    C 
Sbjct: 359 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCF 418

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+ ++  +++ GL + G++  A S+  EM R     +  +  SL+ GLC     + D ++
Sbjct: 419 PNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLC-----KSDRMD 473

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           DA  V + M  +    D   Y  +I ++  G +  EA+      +  G +P   T   + 
Sbjct: 474 DACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLE 533

Query: 413 QA 414
           +A
Sbjct: 534 EA 535



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 111/216 (51%), Gaps = 5/216 (2%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           L ++ +A +  +E  S  + P  +T++I++          +A  +I  +   GY P+V T
Sbjct: 329 LVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVT 388

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           +  L++ LCK+ R++EA ++ D+M  +GC PN  T   ++ GLC VGRV++A+ +++ + 
Sbjct: 389 YNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS 448

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
                P+V  YT+++DG CK  R ++A  +L+    +GV  +   +  L       G   
Sbjct: 449 RKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVA 508

Query: 278 KGVGLLKLMKKRNCLPDKISYSTL-----LNGLLKW 308
           + + +   M  R  LPD  +  TL      N + +W
Sbjct: 509 EAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFEW 544



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 69/164 (42%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK   + + + +   +   G    V  +N L+  L   N    A     E +S G  PN 
Sbjct: 362 IKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPND 421

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T   ++   C      +A  ++  M    + PNV  +T L++ LCKS R+ +A  VLD 
Sbjct: 422 VTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDA 481

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           M   G   +   Y  L+  + + GRV EA  M   +   G  PD
Sbjct: 482 MRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPD 525


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 195/378 (51%), Gaps = 8/378 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ DF+    A+    +    + F  +    G+A N +T +IMI C+C       A  V+
Sbjct: 77  SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 136

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   GY P+ TTF  L+  L   G++ EA+ ++D+M   GC+P++ TYN ++ G+C  
Sbjct: 137 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 196

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A ++L  ++   +K DV+TY+ ++D  C+ G  + A+ L  E   +G+  +VVT+
Sbjct: 197 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 256

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L  G CK G    G  LLK M  R  +P+ I+++ LL+  +K GK++ A  ++KEM+ 
Sbjct: 257 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 316

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   +    N+L+ G CM     ++ L +A  + + M +     D  T+  +I+     
Sbjct: 317 RGISPNIITYNTLMDGYCM-----QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 371

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           K+ D+ +    +  + G +   +T++ ++Q  C  GKI  A  L   M  H  +P   +Y
Sbjct: 372 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 431

Query: 444 DMLITKL---DQLEKSYD 458
            +L+  L    +LEK+ +
Sbjct: 432 GILLDGLCDNGKLEKALE 449



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 182/384 (47%), Gaps = 9/384 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D + ++G    V  +N ++  +    +   A+    +     +  + +T+S 
Sbjct: 164 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 223

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C       A  +   M   G   +V T+  LV  LCK+G+  +   +L  M    
Sbjct: 224 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 283

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ T+N LL      G+++EA E+   +   G+ P++ TY  +MDG+C   R +EA 
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 343

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +L+  +    +P++VTF +L  GYC       G+ + + + KR  + + ++YS L+ G 
Sbjct: 344 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 403

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + GKI+ A  +F+EMV  G   D      LL GLC     +   LE A ++FE + K  
Sbjct: 404 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC-----DNGKLEKALEIFEDLQK-- 456

Query: 366 SVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           S  D G   Y  +I  + KG K ++A          G  P  +T+  +I  LC +G + +
Sbjct: 457 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 516

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLI 447
           A +LL  M E    P+  +Y+ LI
Sbjct: 517 ANILLRKMEEDGNAPNDCTYNTLI 540



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 175/364 (48%), Gaps = 13/364 (3%)

Query: 23  IPQFNKLVVFAAASLSTAESLDL--KENPRSLQAQRF-----VDRI-KASPLKERIDIFD 74
           +  +N +V     S  T+ +LDL  K   R+++A  F     +D + +   +   I +F 
Sbjct: 183 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 242

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
            ++  G   SV  +N L+  L    +         +  S  + PN  TF++++  +  + 
Sbjct: 243 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 302

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
              EA ++   M   G  PN+ T+  L++  C   RL EA  +LD M R  C P+I T+ 
Sbjct: 303 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 362

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+KG C V RV++  ++  N+   GL  +  TY+ ++ GFC+ G+   A EL  E +  
Sbjct: 363 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 422

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           GV P+V+T+  L +G C  G   K + + + ++K       + Y+T++ G+ K GK+  A
Sbjct: 423 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 482

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
            ++F  +   G + +      ++ GLC     +K  L +A  +  KM +  +  +  TY 
Sbjct: 483 WNLFCSLPCKGVKPNVMTYTVMISGLC-----KKGSLSEANILLRKMEEDGNAPNDCTYN 537

Query: 375 IVIR 378
            +IR
Sbjct: 538 TLIR 541



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 137/281 (48%), Gaps = 35/281 (12%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  FN LL   V   + + A + + E  + G++PN  T++ ++  YC +N   EA  ++
Sbjct: 287 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 346

Query: 144 DCMFDNGYHPNVTTFT-----------------------------------ILVNSLCKS 168
           D M  N   P++ TFT                                   ILV   C+S
Sbjct: 347 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 406

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G++K A E+  +M   G  P++ TY  LL GLC  G++E+A E+  +++   +   +  Y
Sbjct: 407 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 466

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           T +++G CK G+  +A  L      +GV PNV+T+  + +G CK+G+  +   LL+ M++
Sbjct: 467 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 526

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
               P+  +Y+TL+   L+ G +  +  + +EM   GF  D
Sbjct: 527 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 567



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 127/241 (52%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++ D + ++  +  +  F  L+    M+   +  +K F   S  GL  N+ T+SI
Sbjct: 339 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 398

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++ +C       A ++   M  +G  P+V T+ IL++ LC +G+L++ALE+ + + +  
Sbjct: 399 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 458

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
               I  Y  +++G+C  G+VE+A+ +  ++   G+KP+V TYT ++ G CK G  +EA 
Sbjct: 459 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 518

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL +  E G  PN  T+NTL   + ++G       L++ MK      D  S   +++ L
Sbjct: 519 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578

Query: 306 L 306
           L
Sbjct: 579 L 579



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 5/251 (1%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P +  ++       +  + N  ++   +    G+  N+ T N + N +C+         +
Sbjct: 76  PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 135

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L  + K    PD  +++TL+ GL   GK+  AV +   MV  G + D    NS++ G+C 
Sbjct: 136 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 195

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
               +  L   A  +  KM ++    D  TY  +I +L +    D A+         G  
Sbjct: 196 SG--DTSL---ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 250

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
              +T+N++++ LC  GK +   LLL  M     +P+  ++++L+    +  K  +A  L
Sbjct: 251 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 310

Query: 463 YGAALKQGVIP 473
           Y   + +G+ P
Sbjct: 311 YKEMITRGISP 321



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 94/427 (22%), Positives = 169/427 (39%), Gaps = 79/427 (18%)

Query: 57  FVDRIKASPLKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
           F   IK   + +R+D    +F +I K G   +   ++ L+       + + A + F E  
Sbjct: 361 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 420

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVID-----------CMFDN------------ 149
           S+G+ P+  T+ I++   C+     +A ++ +            M+              
Sbjct: 421 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 480

Query: 150 ------------GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
                       G  PNV T+T++++ LCK G L EA  +L +M   G  PN  TYN L+
Sbjct: 481 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 540

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD-----------GFCKVGRSNEAME 246
           +     G +  + +++  +K+ G   D  +   V+D            +C    S    +
Sbjct: 541 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQD 600

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           LL  +    +  + +TF  +F   C   T    V  ++     +   ++       + +L
Sbjct: 601 LLELSGSEKIRLSSLTFVKMFP--CNTITTSLNVNTIEARGMNSAELNRDLRKLRRSSVL 658

Query: 307 KWGKIRPA-VSIFKEMVRFGFEVDE-RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           K  K R   V +  E++ +G E  E  +M  L            +L  DA     +  + 
Sbjct: 659 KKFKNRDVRVLVTNELLTWGLEDAECDLMVDL------------ELPTDAVHYAHRAGR- 705

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             +  PG    V+        T E L H    I+ G  P TIT++++I   C E ++D+A
Sbjct: 706 --MRRPGRKMTVV--------TAEEL-H-KEMIQRGIAPNTITYSSLIDGFCKENRLDEA 753

Query: 425 LLLLFLM 431
             +L LM
Sbjct: 754 NQMLDLM 760



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A EL  E I+RG+ PN +T+++L +G+CKE    +   +L LM  +      I Y  LL 
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG--DSDIRY--LLA 773

Query: 304 GLLK 307
           GL++
Sbjct: 774 GLMR 777



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 31/50 (62%)

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           V  A E+   +   G+ P+  TY++++DGFCK  R +EA ++L+  + +G
Sbjct: 715 VVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 192/390 (49%), Gaps = 5/390 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
             + I  F  ++K            L   L+ LN    A  F+ E    G  P+   F++
Sbjct: 171 FSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNV 230

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C ++   EA+ +   +   G  P V +F  L+N  CKSG L +   +   M    
Sbjct: 231 LMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR 290

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ TY+ L+ GLC  G++++A ++ + + + GL P+  T+T +++G C  GR++  M
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGM 350

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+  + + +GV P+V+T+NTL NG CK G   +   L+  M +R   PDK +Y+ L++G 
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +  A+ I KEMV+ G E+D     +L+ G C     E  ++E A +   +M +  
Sbjct: 411 CKEGDLESALEIRKEMVKEGIELDNVAFTALISGFC----REGQVIE-AERTLREMLEAG 465

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY +VI    K          L      GH+P  +T+N ++  LC +G++  A 
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNAN 525

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
           +LL  M     +P   +Y++L+ +  Q  K
Sbjct: 526 MLLDAMLNLGVVPDDITYNILLERTLQAWK 555



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 133/280 (47%), Gaps = 13/280 (4%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT--YNC--LLKGLCYVGR 205
           G H +   F++L+N+   SG   +A++      R+  K N+Q   ++C  L   L  +  
Sbjct: 150 GTHQSNLVFSVLMNAYTDSGYFSDAIQCF----RLVRKHNLQIPFHSCGYLFDRLMKLNL 205

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
              A+     + + G  PDV  +  +M   CK  + NEA  L  E  +RG+ P VV+FNT
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNT 265

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L NGYCK G   +G  L + M +    PD  +YS L+NGL K G++  A  +F EM   G
Sbjct: 266 LINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG 325

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              ++    +L+ G C+      DL     +++++M +K    D  TY  +I  L K   
Sbjct: 326 LVPNDVTFTTLINGHCVTG--RADL---GMEIYQQMLRKGVKPDVITYNTLINGLCKVGD 380

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
             EA   +    + G  P   T+  +I   C EG ++ AL
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESAL 420



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 6/171 (3%)

Query: 34  AASLSTAESLDLKENPRSLQAQRFVDRI------KASPLKERIDIFDSIKKDGTNWSVSD 87
              L  A+ L ++   R L+  +F   +      K   L+  ++I   + K+G       
Sbjct: 378 VGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           F  L+       +   A +   E    G+ P+  T++++I  +C K D     K++  M 
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQ 497

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
            +G+ P V T+ +L+N LCK G++K A  +LD M  +G  P+  TYN LL+
Sbjct: 498 CDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 6/233 (2%)

Query: 242 NEAMELLNEAIE-RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           N A  +    +E RG   + + F+ L N Y   G     +   +L++K N      S   
Sbjct: 136 NSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGY 195

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L + L+K     PA + ++E++  G+  D    N L+  LC     ++  + +A  +F +
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLC-----KEHKINEAQLLFGE 250

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           + K+       ++  +I    K    D+        +E    P   T++ +I  LC EG+
Sbjct: 251 IGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQ 310

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +D A  L   M +   +P+  ++  LI       ++     +Y   L++GV P
Sbjct: 311 LDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKP 363



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 107/283 (37%), Gaps = 40/283 (14%)

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           ++ L+      G   +A +    V+   L+   ++   + D   K+  ++ A     E +
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           + G  P+V  FN L +  CKE    +   L   + KR   P  +S++TL+NG  K G + 
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
                       GF +   MM             E  +  D +                T
Sbjct: 278 Q-----------GFRLKRFMM-------------ENRVFPDVF----------------T 297

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y ++I  L K  + D+A        + G +P  +TF  +I   C  G+ D  + +   M 
Sbjct: 298 YSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
                P   +Y+ LI  L ++    +A  L     ++G+ P +
Sbjct: 358 RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDK 400


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 192/367 (52%), Gaps = 5/367 (1%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
           + S+    GL+P+S+T++ +I  YC  ND   A KV + M + G   N  ++T +++ LC
Sbjct: 236 YVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLC 295

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           ++GR+ E + +  +M    C P ++TY  ++  L    R  E  ++   ++    +P+V+
Sbjct: 296 EAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVH 355

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYT ++D  CK  + +E+  +LNE +E+G+ P+VVT+N L  GYC+EG     + +L LM
Sbjct: 356 TYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLM 415

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           +  NC P++ +Y+ L+ G  K   +  A+++  +M+           NSL+   C     
Sbjct: 416 ESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQC----- 470

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
           +    + AY++ + + +   V D  TY + I TL K K+ +EA    +   E G     +
Sbjct: 471 KAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEV 530

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
            +  +I   C  GKID+A+ LL  M+    +P+ ++Y+ LI  + +  K  +  ++    
Sbjct: 531 MYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENM 590

Query: 467 LKQGVIP 473
            K GV P
Sbjct: 591 SKMGVKP 597



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 195/449 (43%), Gaps = 75/449 (16%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E I +F  +++D    +V  +  ++ AL   +     +  F+E       PN  
Sbjct: 296 EAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVH 355

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+++M+   C +    E+R++++ M + G  P+V T+  L+   C+ GR++ ALE+L  M
Sbjct: 356 TYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLM 415

Query: 182 GRIGCKPNIQTYNCLLKGL-----------------------------------CYVGRV 206
               C+PN +TYN L+ G                                    C  G  
Sbjct: 416 ESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHF 475

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           + AY++L  +K +GL PD +TY+  +D  CK  R  EA +L N   E+G+  N V +  L
Sbjct: 476 DSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTAL 535

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G+CK G   + + LL+ M   +CLP+  +Y++L+ G+ K GK++  +S+ + M + G 
Sbjct: 536 IDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGV 595

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
                                                K +V    TY I+I  + +    
Sbjct: 596 -------------------------------------KPTV---ATYTILIEEMLREGDF 615

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D A    +  +  GH P   T+   I   C  G + +A  ++  M E   +P   +Y +L
Sbjct: 616 DHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLL 675

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQR 475
           I+  ++L  +YDA  +    L  G  P  
Sbjct: 676 ISAYERLGLAYDAFNVLKRMLDAGCDPSH 704



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 164/351 (46%), Gaps = 5/351 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   I + + + G   SV  +N L+         E A++      S    PN  
Sbjct: 366 KERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNER 425

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +  +    +A  ++  M ++   P++ T+  L++  CK+G    A ++LD +
Sbjct: 426 TYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLL 485

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TY+  +  LC   R+EEA ++  ++K  G+K +   YTA++DG CK G+ 
Sbjct: 486 KENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKI 545

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA+ LL         PN  T+N+L  G CKEG   +G+ +++ M K    P   +Y+ L
Sbjct: 546 DEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTIL 605

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  +L+ G    A  +F +MV FG + D     + +   C         +++A  +  +M
Sbjct: 606 IEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGN-----VKEAEGMMARM 660

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            +   + D  TY ++I    +     +A   L   ++ G  P    +NN+I
Sbjct: 661 IEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 155/304 (50%), Gaps = 9/304 (2%)

Query: 175 LEVLDQMGR----IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           L+ L QM R    I  K ++++YN LL  L     ++E   +   + ND + P++YT   
Sbjct: 160 LDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNT 219

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           +++ + K+G   EA   +++  + G++P+  T+ +L  GYC+         +  +M  + 
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C  +++SY+T+++GL + G+I   +S+FK+M         R    ++  L      +++L
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALF---GNDRNL 336

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
             +   +F +M ++    +  TY +++  + K +K DE+   L+  +E G +P  +T+N 
Sbjct: 337 --EGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNA 394

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I+  C EG+I+ AL +L LM  +   P+  +Y+ LI    + +  + A  L    L+  
Sbjct: 395 LIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESK 454

Query: 471 VIPQ 474
           + P 
Sbjct: 455 LTPS 458


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 195/426 (45%), Gaps = 41/426 (9%)

Query: 85  VSDFNDLLMALVMLNEQ-ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +  F  LL A+V + +  +  +    +    GL+PN +T SI + C+C          V+
Sbjct: 92  IIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVL 151

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   G  P + TFT L+N LCK G   +A+E+ D M   GC+P++ TYN ++ GLC +
Sbjct: 152 AKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKI 211

Query: 204 GR-----------------------------------VEEAYEMLMNVKNDGLKPDVYTY 228
           G                                    V EA ++   +K  G+ PD++TY
Sbjct: 212 GETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTY 271

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           T+++ G CK  R  EA  LLNE     + P++VTFN L + +CKEG   + +G+LK M +
Sbjct: 272 TSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTE 331

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
               P+ ++YS+L+ G   W  +  A  +F  M+  G + +    N L+ G C     + 
Sbjct: 332 MGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYC-----KA 386

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             +++A Q+F +M  +    +  +Y  +I    +  K  EA     +    G++P   T+
Sbjct: 387 KRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTY 446

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           + ++   C +G + KA  L   M      P+   Y +L+  + +     DA  L+     
Sbjct: 447 SILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFV 506

Query: 469 QGVIPQ 474
           QG+ P 
Sbjct: 507 QGLQPH 512



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 189/416 (45%), Gaps = 5/416 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K     + +++FD +   G    V  +N ++  L  + E   A     +    G  PN  
Sbjct: 175 KVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMV 234

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I   C      EA  +   M   G  P++ T+T L+  LCK  R KEA  +L++M
Sbjct: 235 TYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEM 294

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +   P+I T+N L+   C  G+V EA  +L  +   G++P+V TY+++M G+      
Sbjct: 295 TSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDV 354

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +L +  I +G  PN+ ++N L NGYCK     + + L   M  +   P+ +SY+TL
Sbjct: 355 VEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTL 414

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  + GK+R A  +F+ M   G   D    + LL G C + +     L  A+++F  M
Sbjct: 415 IHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGY-----LGKAFRLFRAM 469

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  +   Y I++  + K     +A          G  P    +  +I  LC EG +
Sbjct: 470 QSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLL 529

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
           D+AL     M      P   SY+++I  L Q +    A  L G    +G I   +P
Sbjct: 530 DEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRP 585


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 195/378 (51%), Gaps = 8/378 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ DF+    A+    +    + F  +    G+A N +T +IMI C+C       A  V+
Sbjct: 87  SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   GY P+ TTF  L+  L   G++ EA+ ++D+M   GC+P++ TYN ++ G+C  
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A ++L  ++   +K DV+TY+ ++D  C+ G  + A+ L  E   +G+  +VVT+
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L  G CK G    G  LLK M  R  +P+ I+++ LL+  +K GK++ A  ++KEM+ 
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   +    N+L+ G CM++      L +A  + + M +     D  T+  +I+     
Sbjct: 327 RGISPNIITYNTLMDGYCMQNR-----LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           K+ D+ +    +  + G +   +T++ ++Q  C  GKI  A  L   M  H  +P   +Y
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 444 DMLITKL---DQLEKSYD 458
            +L+  L    +LEK+ +
Sbjct: 442 GILLDGLCDNGKLEKALE 459



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 182/384 (47%), Gaps = 9/384 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D + ++G    V  +N ++  +    +   A+    +     +  + +T+S 
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C       A  +   M   G   +V T+  LV  LCK+G+  +   +L  M    
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ T+N LL      G+++EA E+   +   G+ P++ TY  +MDG+C   R +EA 
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +L+  +    +P++VTF +L  GYC       G+ + + + KR  + + ++YS L+ G 
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + GKI+ A  +F+EMV  G   D      LL GLC     +   LE A ++FE + K  
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC-----DNGKLEKALEIFEDLQK-- 466

Query: 366 SVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           S  D G   Y  +I  + KG K ++A          G  P  +T+  +I  LC +G + +
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLI 447
           A +LL  M E    P+  +Y+ LI
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLI 550



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 175/364 (48%), Gaps = 13/364 (3%)

Query: 23  IPQFNKLVVFAAASLSTAESLDL--KENPRSLQAQRF-----VDRI-KASPLKERIDIFD 74
           +  +N +V     S  T+ +LDL  K   R+++A  F     +D + +   +   I +F 
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
            ++  G   SV  +N L+  L    +         +  S  + PN  TF++++  +  + 
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
              EA ++   M   G  PN+ T+  L++  C   RL EA  +LD M R  C P+I T+ 
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+KG C V RV++  ++  N+   GL  +  TY+ ++ GFC+ G+   A EL  E +  
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           GV P+V+T+  L +G C  G   K + + + ++K       + Y+T++ G+ K GK+  A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
            ++F  +   G + +      ++ GLC     +K  L +A  +  KM +  +  +  TY 
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLC-----KKGSLSEANILLRKMEEDGNAPNDCTYN 547

Query: 375 IVIR 378
            +IR
Sbjct: 548 TLIR 551



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 137/281 (48%), Gaps = 35/281 (12%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  FN LL   V   + + A + + E  + G++PN  T++ ++  YC +N   EA  ++
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356

Query: 144 DCMFDNGYHPNVTTFT-----------------------------------ILVNSLCKS 168
           D M  N   P++ TFT                                   ILV   C+S
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G++K A E+  +M   G  P++ TY  LL GLC  G++E+A E+  +++   +   +  Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           T +++G CK G+  +A  L      +GV PNV+T+  + +G CK+G+  +   LL+ M++
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
               P+  +Y+TL+   L+ G +  +  + +EM   GF  D
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 128/245 (52%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++ D + ++  +  +  F  L+    M+   +  +K F   S  GL  N+ T+SI
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++ +C       A ++   M  +G  P+V T+ IL++ LC +G+L++ALE+ + + +  
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
               I  Y  +++G+C  G+VE+A+ +  ++   G+KP+V TYT ++ G CK G  +EA 
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL +  E G  PN  T+NTL   + ++G       L++ MK      D  S   +++ L
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588

Query: 306 LKWGK 310
           L   K
Sbjct: 589 LSAMK 593



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 5/251 (1%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P +  ++       +  + N  ++   +    G+  N+ T N + N +C+         +
Sbjct: 86  PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L  + K    PD  +++TL+ GL   GK+  AV +   MV  G + D    NS++ G+C 
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
               +  L   A  +  KM ++    D  TY  +I +L +    D A+         G  
Sbjct: 206 SG--DTSL---ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
              +T+N++++ LC  GK +   LLL  M     +P+  ++++L+    +  K  +A  L
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 463 YGAALKQGVIP 473
           Y   + +G+ P
Sbjct: 321 YKEMITRGISP 331



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 39/216 (18%)

Query: 57  FVDRIKASPLKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
           F   IK   + +R+D    +F +I K G   +   ++ L+       + + A + F E  
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVID-----------CMFDN------------ 149
           S+G+ P+  T+ I++   C+     +A ++ +            M+              
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490

Query: 150 ------------GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
                       G  PNV T+T++++ LCK G L EA  +L +M   G  PN  TYN L+
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           +     G +  + +++  +K+ G   D  +   V+D
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 181/364 (49%), Gaps = 6/364 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSY-GLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +  F  LL A+V + +   AV   S+     GL+P+ +T SI+I C+ +      A  V 
Sbjct: 94  IIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVF 153

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G  P+  TF  L+N LCK G+  +A+E  D     GC+P + TY  ++ GLC +
Sbjct: 154 SKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKI 213

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A  +   ++  G +P+V TY  ++D  CK    NEA+++ +    + ++P++ T+
Sbjct: 214 GETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTY 273

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L  G C      +   LL  M   N +P+  +++ L++ + K GK+  A  +FK M  
Sbjct: 274 NSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTE 333

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E D    +SL+ G  ++       + +A ++F+ M  K    D  +Y I+I+   K 
Sbjct: 334 MGVEPDVVTYSSLMYGYSLRME-----IVEARKLFDAMITKGCKPDAFSYNILIKGYCKA 388

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           K+ DEA    +  I  G  P  + +N +I  LC  G++ +A  L   M+ +  +P   +Y
Sbjct: 389 KRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTY 448

Query: 444 DMLI 447
            ML+
Sbjct: 449 SMLL 452



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 180/376 (47%), Gaps = 5/376 (1%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           L   + A   FS+    GL P++ TF+ +I   C    F +A +  D    +G  P V T
Sbjct: 143 LQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYT 202

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           +T ++N LCK G    A  +  +M   GC+PN+ TYN L+  LC    V EA ++   +K
Sbjct: 203 YTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMK 262

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
              + PD++TY +++ G C   R  EA  LLNE     + PN+ TFN L +  CKEG   
Sbjct: 263 AKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVS 322

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +  G+ K M +    PD ++YS+L+ G     +I  A  +F  M+  G + D    N L+
Sbjct: 323 EAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILI 382

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
           +G C     +   +++A Q+F +M  +    D   Y  +I  L +  +  EA     +  
Sbjct: 383 KGYC-----KAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMH 437

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             G++P   T++ ++   C EG + KA  L  +M      P    Y++LI  + +     
Sbjct: 438 SNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLK 497

Query: 458 DACALYGAALKQGVIP 473
           DA  L+     QG++P
Sbjct: 498 DARKLFSELFVQGLLP 513



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 196/441 (44%), Gaps = 34/441 (7%)

Query: 68  ERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           +R+D    +F  + K G       FN L+  L  + +   AV+FF +  + G  P  +T+
Sbjct: 144 QRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTY 203

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +I   C   +   A  +   M + G  PNV T+ IL++SLCK   + EAL++   M  
Sbjct: 204 TTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKA 263

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P+I TYN L++GLC   R +EA  +L  + +  + P+++T+  ++D  CK G+ +E
Sbjct: 264 KRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSE 323

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A  +     E GV P+VVT+++L  GY      ++   L   M  + C PD  SY+ L+ 
Sbjct: 324 AQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIK 383

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLED-------- 353
           G  K  +I  A  +F EM+  G   D    N+L+ GLC   +  E +DL ++        
Sbjct: 384 GYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLP 443

Query: 354 --------------------AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
                               A+++F  M       D   Y I+I  + K     +A    
Sbjct: 444 DLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLF 503

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
                 G +P    +  +I  LC EG +D+AL     M      P   SY+++I    Q 
Sbjct: 504 SELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQY 563

Query: 454 EKSYDACALYGAALKQGVIPQ 474
           +    A  L G    +G + +
Sbjct: 564 KDESRAAQLIGEMRDRGFVAE 584



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 162/324 (50%), Gaps = 5/324 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E +DIF  +K    +  +  +N L+  L      + A    +E +S  + PN +TF++
Sbjct: 251 VNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNV 310

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C +    EA+ V   M + G  P+V T++ L+        + EA ++ D M   G
Sbjct: 311 LVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKG 370

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CKP+  +YN L+KG C   R++EA ++   + + GL PD   Y  ++ G C++GR  EA 
Sbjct: 371 CKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQ 430

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L       G  P++ T++ L +G+CKEG   K   L ++M+     PD   Y+ L++ +
Sbjct: 431 DLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAM 490

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K+G ++ A  +F E+   G   + ++  +++  LC     ++ LL++A + F  M    
Sbjct: 491 CKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLC-----KEGLLDEALEAFRNMEGDG 545

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEA 389
              D  +Y ++IR   + K    A
Sbjct: 546 CPPDEFSYNVIIRGFLQYKDESRA 569



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 78/164 (47%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E  D+F ++  +G    +  ++ LL           A + F    S  L P+   ++I
Sbjct: 426 LREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNI 485

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C   +  +ARK+   +F  G  PNV  +T ++N+LCK G L EALE    M   G
Sbjct: 486 LIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDG 545

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           C P+  +YN +++G         A +++  +++ G   +  T T
Sbjct: 546 CPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 205/429 (47%), Gaps = 43/429 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + + +F  + K     S+ +F+ LL A+  +N+ +  +    +  + G+  N +T+SI
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM---- 181
           +I C+C ++    A  V+  M   GY PN+ T + L+N  C S R+ EA+ ++DQM    
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 182 ----------------------------GRI---GCKPNIQTYNCLLKGLCYVGRVEEAY 210
                                        R+   GC+P++ TY  ++ GLC  G  + A+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L  ++   L+P V  Y  ++DG CK    ++A+ L  E   +G+ PNVVT+++L +  
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C  G       LL  M +R   PD  ++S L++  +K GK+  A  ++ EMV+   +   
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              +SL+ G CM      D L++A Q+FE M  K    D  TY  +I+   K K+ +E +
Sbjct: 362 VTYSSLINGFCM-----HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                  + G +  T+T+N +IQ L   G  D A  +   M      P+  +Y+ L+  L
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476

Query: 451 ---DQLEKS 456
               +LEK+
Sbjct: 477 CKNGKLEKA 485



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 204/412 (49%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           + S L   + +   + K G   ++   + LL           AV    +    G  PN+ 
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I      N   EA  +ID M   G  P++ T+ ++VN LCK G    A  +L++M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +   +P +  YN ++ GLC    +++A  +   ++  G++P+V TY++++   C  GR 
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A  LL++ IER + P+V TF+ L + + KEG  ++   L   M KR+  P  ++YS+L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG     ++  A  +F+ MV      D    N+L++G C     +   +E+  +VF +M
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC-----KYKRVEEGMEVFREM 422

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           +++  V +  TY I+I+ L +    D A       +  G  P  +T+N ++  LC  GK+
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +KA+++   +      P+  +Y+++I  + +  K  D   L+     +GV P
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 203/408 (49%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D +   G   +   FN L+  L + N+   A+       + G  P+  T+ +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C + D   A  +++ M      P V  +  +++ LCK   + +AL +  +M   G
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+ TY+ L+  LC  GR  +A  +L ++    + PDV+T++A++D F K G+  EA 
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L +E ++R + P++VT+++L NG+C      +   + + M  ++C PD ++Y+TL+ G 
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K+ ++   + +F+EM + G   +    N L++GL    ++  D  + A ++F++M    
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL----FQAGD-CDMAQEIFKEMVSDG 461

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY  ++  L K  K ++A++   +       P   T+N +I+ +C  GK++   
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L   +      P   +Y+ +I+   +     +A AL+    + G +P
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 167/332 (50%), Gaps = 5/332 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++  L      + A+  F E  + G+ PN  T+S +I C CN   + +A +++  M 
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +   +P+V TF+ L+++  K G+L EA ++ D+M +    P+I TY+ L+ G C   R++
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA +M   + +    PDV TY  ++ GFCK  R  E ME+  E  +RG+  N VT+N L 
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G  + G       + K M      P+ ++Y+TLL+GL K GK+  A+ +F+ + R   E
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N ++ G+C     +   +ED + +F  ++ K    D   Y  +I    +    +
Sbjct: 499 PTIYTYNIMIEGMC-----KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           EA        E G +P +  +N +I+A   +G
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 183/385 (47%), Gaps = 13/385 (3%)

Query: 46  KENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA 104
           K  P  L     +D + K   + + +++F  ++  G   +V  ++ L+  L        A
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310

Query: 105 VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
            +  S+     + P+ +TFS +I  +  +    EA K+ D M      P++ T++ L+N 
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
            C   RL EA ++ + M    C P++ TYN L+KG C   RVEE  E+   +   GL  +
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
             TY  ++ G  + G  + A E+  E +  GV PN++T+NTL +G CK G   K + + +
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK- 343
            +++    P   +Y+ ++ G+ K GK+     +F  +   G + D    N+++ G C K 
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT-LGKGKKTDEA-LIHLHHAIEMGH 401
           S EE D L      F++M +  ++ + G Y  +IR  L  G +   A LI    +     
Sbjct: 551 SKEEADAL------FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAG 604

Query: 402 IPRTITFNNVIQALCGEGKIDKALL 426
              TI    ++  +  +G++DK+ L
Sbjct: 605 DASTI---GLVTNMLHDGRLDKSFL 626



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 1/299 (0%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           ++ AS   ++ ++ K NP        +D  +K   L E   ++D + K   + S+  ++ 
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    M +  + A + F    S    P+  T++ +I+ +C      E  +V   M   G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              N  T+ IL+  L ++G    A E+  +M   G  PNI TYN LL GLC  G++E+A 
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   ++   ++P +YTY  +++G CK G+  +  +L      +GV P+VV +NT+ +G+
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           C++G+  +   L K MK+   LP+   Y+TL+   L+ G    +  + KEM   GF  D
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 147/307 (47%), Gaps = 9/307 (2%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +L +A+ +  +M +    P+I  ++ LL  +  + + +    +   ++N G+  + YTY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++ FC+  +   A+ +L + ++ G  PN+VT ++L NGYC      + V L+  M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P+ ++++TL++GL    K   A+++   MV  G + D      ++ GLC +   + D
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG--DTD 238

Query: 350 LLEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           L   A+ +  KM +     +PG   Y  +I  L K K  D+AL         G  P  +T
Sbjct: 239 L---AFNLLNKMEQ--GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           ++++I  LC  G+   A  LL  M E    P   ++  LI    +  K  +A  LY   +
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 468 KQGVIPQ 474
           K+ + P 
Sbjct: 354 KRSIDPS 360


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 201/439 (45%), Gaps = 34/439 (7%)

Query: 68  ERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           +R+D    +   I K G   ++  FN L+  L  + +   AV+ F +  + G  P+  T+
Sbjct: 171 QRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTY 230

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +I   C   +   A  +   M + G  P+V T++ +++SLCK  R+ EAL++   M  
Sbjct: 231 TTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKA 290

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            G  PNI TYN L++GLC   R  EA  ML  + +  + P++ T++ +++ FCK G   E
Sbjct: 291 KGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFE 350

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A  +L    E GV PNVVT+++L NGY  +   ++   L  +M  + C PD  SY+ L+N
Sbjct: 351 ARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILIN 410

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDL----------- 350
           G  K  +I  A  +F EM+  G   D    N+L+ GLC   +  E  DL           
Sbjct: 411 GYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLP 470

Query: 351 -----------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
                            L  A+++F  M       +   Y I+I  + K +   EA    
Sbjct: 471 DLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLF 530

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
                 G  P    +  +I  LC EG +D+AL     M E    P+  SY+++I    Q 
Sbjct: 531 SELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQH 590

Query: 454 EKSYDACALYGAALKQGVI 472
           +    A  L G   ++G +
Sbjct: 591 KDESRAVQLIGEMREKGFV 609



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 200/425 (47%), Gaps = 41/425 (9%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSY-GLAPNSWTFSIMIRCY------------- 130
           +  FN LL A+V +     AV   S+     GL+P+++T  ++I C+             
Sbjct: 121 IIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVL 180

Query: 131 ----------------------CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS 168
                                 C    F +A ++ D M   GY P+V T+T ++N LCK 
Sbjct: 181 AKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKI 240

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G    A  +  +MG  GC+P++ TY+ ++  LC   RV EA ++   +K  G+ P+++TY
Sbjct: 241 GETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTY 300

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
            +++ G C   R  EA  +LNE +   + PN+VTF+ L N +CKEG   +  G+LK M +
Sbjct: 301 NSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTE 360

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
               P+ ++YS+L+NG     ++  A  +F  M+  G + D    N L+ G C     + 
Sbjct: 361 MGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYC-----KA 415

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             + +A Q+F +M  +    D  +Y  +I  L +  +  EA     + +  G++P   T+
Sbjct: 416 KRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTY 475

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           + ++   C +G + KA  L   M      P+   Y++LI  + +     +A  L+     
Sbjct: 476 SILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFV 535

Query: 469 QGVIP 473
           QG+ P
Sbjct: 536 QGLQP 540



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 178/346 (51%), Gaps = 5/346 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +DIF  +K  G + ++  +N L+  L   +    A    +E  S  + PN  
Sbjct: 274 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 333

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS++I  +C + + FEAR V+  M + G  PNV T++ L+N       + EA ++ D M
Sbjct: 334 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GCKP++ +YN L+ G C   R+ EA ++   + + GL PD+ +Y  ++DG C++GR 
Sbjct: 394 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 453

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +L    +  G  P++ T++ L +G+CK+G   K   L + M+     P+ + Y+ L
Sbjct: 454 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 513

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ + K   ++ A  +F E+   G + + ++  +++ GLC     ++ LL++A + F  M
Sbjct: 514 IDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLC-----KEGLLDEALEAFRNM 568

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
            +     +  +Y ++IR   + K    A+  +    E G +    T
Sbjct: 569 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 168/350 (48%), Gaps = 14/350 (4%)

Query: 132 NKNDFFEARKVIDCM--FDNGYH----PNVTTFTILVNSLCKSGRLKEALEVLD-QMGRI 184
           ++ND    R + D +  F++  H    P +  F  L++++ K     +A+  L  QM   
Sbjct: 92  HQNDASSFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELA 151

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  P+  T + L+     + RV+  + +L  +   GL+  + T+  +++G CKVG+  +A
Sbjct: 152 GLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQA 211

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           +EL ++ + RG  P+V T+ T+ NG CK G  +   GL + M +  C PD ++YST+++ 
Sbjct: 212 VELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDS 271

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTK 363
           L K  ++  A+ IF  M   G   +    NSL++GLC    W E   + +       M  
Sbjct: 272 LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN 331

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
            V      T+ ++I    K     EA   L    EMG  P  +T+++++     + ++ +
Sbjct: 332 IV------TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVE 385

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A  L  +M      P   SY++LI    + ++  +A  L+   + QG+ P
Sbjct: 386 ARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTP 435


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 199/406 (49%), Gaps = 12/406 (2%)

Query: 67  KERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +E   +   +++D G   S+   N +L  L    +   A+  F EA    +  ++ TFSI
Sbjct: 171 EEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSI 229

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I          +A  +      NG   ++ T+T +VN L K+ +++EA+ +++++   G
Sbjct: 230 LINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANG 289

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P I TYN LL GLC +GR+EEA ++L  + ++G  PDV TYT+++DG  K  RS EA 
Sbjct: 290 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 349

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L  E   RG+  + V +  L  G  + G   +   + K M    C+PD ++ ST+++GL
Sbjct: 350 KLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 409

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I  AV IFK M   G   +E + ++L+ GLC     +   ++ A ++  +M K  
Sbjct: 410 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC-----KARKMDCALEMLAQMKKAF 464

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY I+I  L K    + A       +E G  P   T+N +I  LC  G  D A 
Sbjct: 465 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAAC 524

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
            +L  M       SR  Y  L+  L +  K    C L+    + GV
Sbjct: 525 GVLDDMSS-----SRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGV 565



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 173/377 (45%), Gaps = 13/377 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E ID+   I  +G    V  +  L+  L        A K F E +S GLA ++ 
Sbjct: 306 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTV 365

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +IR         +A  V   M  +G  P+V T + +++ L K+GR+  A+ +   M
Sbjct: 366 CYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 425

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN   Y+ L+ GLC   +++ A EML  +K     PD  TY  ++DG CK G  
Sbjct: 426 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 485

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A    +E +E G  P+V T+N L +G CK G      G+L  M        +  YS+L
Sbjct: 486 EAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS-----SRFVYSSL 540

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K GK+     +F EM R G   + +    L+  LC     + + +++A  +F  +
Sbjct: 541 VDGLCKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLC-----KANRVDEAVSLFNAI 594

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K  +  P  Y  +I  L K  K +E    ++  +     P  +T+N ++  + G  ++
Sbjct: 595 -RKEGMPHPYAYNSIISALIKSGKVNEGQA-VYQEMTRWWKPDRVTYNALLNGMIGANRM 652

Query: 422 DKALLLLFLMYEHAKIP 438
           D+A      M     +P
Sbjct: 653 DRAHYYYLEMTGRGYVP 669



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 194/438 (44%), Gaps = 28/438 (6%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA  + +   +      +G    +  +  ++  L    + + AV    + ++ G  P  
Sbjct: 235 VKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTI 294

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ ++   C      EA  ++  + DNG  P+V T+T L++ L K  R  EA ++  +
Sbjct: 295 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKE 354

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G   +   Y  L++GL   G++ +A  +   + + G  PDV T + ++DG  K GR
Sbjct: 355 MASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR 414

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A+ +      RG+ PN V ++ L +G CK       + +L  MKK  C PD I+Y+ 
Sbjct: 415 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 474

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------------MKSWE 346
           L++GL K G +  A + F EM+  G + D    N L+ GLC              M S  
Sbjct: 475 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR 534

Query: 347 -----------EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
                      +   LE    +F +M ++  V +  T   +I  L K  + DEA + L +
Sbjct: 535 FVYSSLVDGLCKSGKLEGGCMLFHEM-ERSGVANSQTRTRLIFHLCKANRVDEA-VSLFN 592

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
           AI    +P    +N++I AL   GK+++   +   M    K P R +Y+ L+  +    +
Sbjct: 593 AIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTRWWK-PDRVTYNALLNGMIGANR 651

Query: 456 SYDACALYGAALKQGVIP 473
              A   Y     +G +P
Sbjct: 652 MDRAHYYYLEMTGRGYVP 669



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 186/398 (46%), Gaps = 13/398 (3%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   SV   N LL           A        +    P+  T++++I  YC   +  EA
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173

Query: 140 RKVIDCMFDN-GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
             VI  M ++ G  P++ T  ++++ LCKSG++  A++  + + R     +  T++ L+ 
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRR-SMPVSAATFSILIN 232

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GL   G + +A+ +      +G   D++TYTA+++   K  +  EA+ L+ +    G TP
Sbjct: 233 GLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTP 292

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
            + T+N L NG CK G   + + LL+ +    C PD ++Y++L++GL K  +   A  +F
Sbjct: 293 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 352

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           KEM   G  +D     +L+RGL      +   +  A  V++ MT    V D  T   +I 
Sbjct: 353 KEMASRGLALDTVCYTALIRGLL-----QTGKIPQASSVYKTMTSHGCVPDVVTLSTMID 407

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L K  +   A+         G  P  + ++ +I  LC   K+D AL +L  M +    P
Sbjct: 408 GLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 467

Query: 439 SRTSYDMLITKLDQLEKSYD---ACALYGAALKQGVIP 473
              +Y++LI   D L KS D   A A +   L+ G  P
Sbjct: 468 DTITYNILI---DGLCKSGDVEAARAFFDEMLEAGCKP 502



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 105/274 (38%), Gaps = 62/274 (22%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +   + IF S++  G   +   ++ L+  L    + + A++  ++       P++ 
Sbjct: 411 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 470

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I   C   D   AR   D M + G  P+V T+ IL++ LCK+G    A  VLD M
Sbjct: 471 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM 530

Query: 182 -----------------GRI--GCK----------PNIQTYNCLLKGLCYVGRVEEAYEM 212
                            G++  GC            N QT   L+  LC   RV+EA  +
Sbjct: 531 SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSL 590

Query: 213 LMNVKNDGL---------------------------------KPDVYTYTAVMDGFCKVG 239
              ++ +G+                                 KPD  TY A+++G     
Sbjct: 591 FNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTRWWKPDRVTYNALLNGMIGAN 650

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
           R + A     E   RG  P V   + L +   K+
Sbjct: 651 RMDRAHYYYLEMTGRGYVPPVSILHKLADDRLKD 684


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 205/414 (49%), Gaps = 21/414 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N  L A V  +    AV  ++  +  G   + P   T++I+I 
Sbjct: 42  VFDELLRRGRGASIYGLNRAL-ADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIG 100

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
           C C           +  +   G+  +  TFT L+  LC   R  +A++ VL +M  +GC 
Sbjct: 101 CCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 160

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---GLKPDVYTYTAVMDGFCKVG----- 239
           P++ +YN LLKGLC   R +EA E+L  + +D   G  PDV +Y  V++GF K G     
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKL 220

Query: 240 ---RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
                ++AME+LN  ++ GV P+ +T+N++ +GYC  G P + +G LK M+     P+ +
Sbjct: 221 TAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 280

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +YS+L+N L K G+   A  IF  M + G E D     +LL+G C    +E  ++E + +
Sbjct: 281 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHC----KEGRVIE-SEK 335

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +F+ M +     D  TY  +I       K DEA   L   + +G  P  +T+  +I   C
Sbjct: 336 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 395

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
              ++D AL L   M      P+  +Y++++  L    ++  A  LY +  K G
Sbjct: 396 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 449



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 177/340 (52%), Gaps = 9/340 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+ P+  T++ ++  YC+     EA   +  M  +G  PNV T++ L+N LCK+GR  EA
Sbjct: 239 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 298

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            ++ D M + G +P+I TY  LL+G C  GRV E+ ++   +   G+KPD+ TY  ++DG
Sbjct: 299 RKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 358

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            C  G+ +EA +LL   +  GV P++VT+ TL NGYC+       + L K M      P+
Sbjct: 359 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 418

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            I+Y+ +L GL    +   A  ++  + + G +++    N +L GLC     + +L ++A
Sbjct: 419 IITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC-----KNNLTDEA 473

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA--LIHLHHAIEMGHIPRTITFNNVI 412
            ++F+ +       +  T+ I+I  L K  + DEA  L   H A   G +P   T++ + 
Sbjct: 474 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA--NGLVPDVRTYSLMA 531

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           + L  +G +++   L   M E+         + ++ KL Q
Sbjct: 532 ENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQ 571



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 196/393 (49%), Gaps = 16/393 (4%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           ++ A  + + +++ +++ K+G       +N +L       + + A+    +  S G+ PN
Sbjct: 219 KLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 278

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             T+S ++   C      EARK+ D M   G  P++ T+  L+   CK GR+ E+ ++ D
Sbjct: 279 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFD 338

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M RIG KP+I TYN L+ G C  G+++EA ++L ++ + G+KPD+ TY  +++G+C+V 
Sbjct: 339 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 398

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R ++A+ L  E +  GV+PN++T+N +  G            L   + K     +  +Y+
Sbjct: 399 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 458

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL--CMKSWEEKDLLEDAYQV 357
            +L+GL K      A+ +F+ +     +++ R  N ++  L  C +  E KDL       
Sbjct: 459 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL------- 511

Query: 358 FEKMTKKVSVTDPGTYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           F   +    V D  TY ++   L   G  ++ D+  + +    E G    +   N++++ 
Sbjct: 512 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME---ENGCSADSRMLNSIVRK 568

Query: 415 LCGEGKIDKALLLLFLMYE-HAKIPSRTSYDML 446
           L   G I +A   LF++ E H  + + T+  +L
Sbjct: 569 LLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 601



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 166/333 (49%), Gaps = 17/333 (5%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P V T+ IL+   C++GRL      L  + + G + +  T+  LLKGLC   R  +A ++
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 213 LMNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAMELLNE-AIERG--VTPNVVTFNTLFN 268
           ++    + G  PDV++Y  ++ G C   RS EA+ELL+  A +RG    P+VV++NT+ N
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 269 GYCKEGTPMK--------GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           G+ KEG   K         + +L  M K   +PD ++Y+++L+G    G+ + A+   K+
Sbjct: 210 GFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 269

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M   G E +    +SL+  LC           +A ++F+ MTK+    D  TY  +++  
Sbjct: 270 MRSDGVEPNVVTYSSLMNYLCKNGRST-----EARKIFDSMTKRGLEPDIATYRTLLQGH 324

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K  +  E+       + +G  P  IT+N +I   C  GK+D+A  LL  M      P  
Sbjct: 325 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 384

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +Y  LI    ++ +  DA AL+   +  GV P
Sbjct: 385 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSP 417


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 194/390 (49%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV DF  +L ++  +    T +    +  S G+  + +T +I+I  +C+ N       V+
Sbjct: 73  SVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVL 132

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +F  G+ P+  TFT L+  LC  G++ EAL + D+M   G +PN  TY  L+ GLC V
Sbjct: 133 AKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKV 192

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A  +L ++     +P+V TY  ++D   K  + NEA+ + +E I +G++PNV T+
Sbjct: 193 GNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTY 252

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N++ +G CK         L+  M     +P+ + ++TL++ L K G +  A  +   M++
Sbjct: 253 NSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQ 312

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E D     +L+ G C++S      +++A +VF+ M +K    +  +Y  +I    K 
Sbjct: 313 RGVEPDVVTYTALMDGHCLRSE-----MDEADKVFDTMVRKGCAPNVISYSTLINGYCKI 367

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           ++ D+A+       +   +P  +T+N +I  LC  G++  A+ L   M    +IP   +Y
Sbjct: 368 QRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTY 427

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +L+  L +      A A+  A     + P
Sbjct: 428 RILLDYLCKTRHLDQAMAMLKAIEGSNLAP 457



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 172/358 (48%), Gaps = 5/358 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E ++IF  +   G + +VS +N ++  L   +E +      +E     + PN  
Sbjct: 226 KDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVV 285

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ ++   C +     A  V+D M   G  P+V T+T L++  C    + EA +V D M
Sbjct: 286 IFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTM 345

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R GC PN+ +Y+ L+ G C + R+++A  +   +    L P++ TY  ++ G C VGR 
Sbjct: 346 VRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRL 405

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L +E +  G  P++VT+  L +  CK     + + +LK ++  N  PD  SY+ +
Sbjct: 406 RDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIV 465

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G+ + G++  A  +F  +   G   D      ++ GLC++      LL +A ++F +M
Sbjct: 466 IDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQG-----LLAEATKLFREM 520

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
                  D  TY ++ R   +  +T  A+  L   +  G      T   +++ L  +G
Sbjct: 521 NTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG 578



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 182/380 (47%), Gaps = 7/380 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +   I K G     + F  L+  L +  +   A+  F +    G  PN  T+  +I   C
Sbjct: 131 VLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLC 190

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +   A +++  M      PNV T+  +++ L K  ++ EAL +  +M   G  PN+ 
Sbjct: 191 KVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVS 250

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN ++ GLC     +    ++  + +  + P+V  +T ++D  CK G    A ++++  
Sbjct: 251 TYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVM 310

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I+RGV P+VVT+  L +G+C      +   +   M ++ C P+ ISYSTL+NG  K  +I
Sbjct: 311 IQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRI 370

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ +F+EM +     +    N+L+ GLC         L DA  +F +M     + D  
Sbjct: 371 DKAMYLFEEMCQRELVPNIVTYNTLIHGLC-----HVGRLRDAIALFHEMVASGQIPDLV 425

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFL 430
           TY I++  L K +  D+A+  L  AIE  ++ P   ++N VI  +C  G+++ A  L   
Sbjct: 426 TYRILLDYLCKTRHLDQAMAML-KAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSS 484

Query: 431 MYEHAKIPSRTSYDMLITKL 450
           +      P   +Y ++I  L
Sbjct: 485 LSSKGLHPDVWTYTIMINGL 504



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 188/405 (46%), Gaps = 5/405 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +FD +  +G   +   +  L+  L  +     A++           PN  T++ 
Sbjct: 160 IGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNT 219

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I C        EA  +   M   G  PNV+T+  +++ LCK    K    ++++M    
Sbjct: 220 IIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSK 279

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+  +  L+  LC  G V  A++++  +   G++PDV TYTA+MDG C     +EA 
Sbjct: 280 IMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEAD 339

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +  + +G  PNV++++TL NGYCK     K + L + M +R  +P+ ++Y+TL++GL
Sbjct: 340 KVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGL 399

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G++R A+++F EMV  G   D      LL  LC     +   L+ A  + + +    
Sbjct: 400 CHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLC-----KTRHLDQAMAMLKAIEGSN 454

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  +Y IVI  + +  + + A          G  P   T+  +I  LC +G + +A 
Sbjct: 455 LAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEAT 514

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
            L   M      P   +Y+++     +  ++  A  L    L +G
Sbjct: 515 KLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRG 559



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 169/372 (45%), Gaps = 30/372 (8%)

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N N   EA    + M      P+V  F  ++ S+         L +  QM  +G   ++ 
Sbjct: 51  NFNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVY 110

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T   ++   C++ RV+  + +L  +   G +PD  T+T ++ G C  G+  EA+ L ++ 
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  G  PN VT+ TL +G CK G     + LL+ M ++NC P+ I+Y+T+++ L K  ++
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV 230

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWE------------------------ 346
             A++IF EM+  G   +    NS++ GLC    W+                        
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL 290

Query: 347 -----EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                ++ ++  A+ V + M ++    D  TY  ++       + DEA       +  G 
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P  I+++ +I   C   +IDKA+ L   M +   +P+  +Y+ LI  L  + +  DA A
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410

Query: 462 LYGAALKQGVIP 473
           L+   +  G IP
Sbjct: 411 LFHEMVASGQIP 422



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 130/260 (50%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E   +FD++ + G   +V  ++ L+     +   + A+  F E     L PN  T+
Sbjct: 333 SEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTY 392

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +I   C+     +A  +   M  +G  P++ T+ IL++ LCK+  L +A+ +L  +  
Sbjct: 393 NTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEG 452

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P+IQ+YN ++ G+C VG +E A ++  ++ + GL PDV+TYT +++G C  G   E
Sbjct: 453 SNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAE 512

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A +L  E    G +P+  T+N +  G+ +    +  + LL+ M  R    D  + + ++ 
Sbjct: 513 ATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVE 572

Query: 304 GLLKWGKIRPAVSIFKEMVR 323
            L   G  +    I  E V+
Sbjct: 573 MLSDDGLDQSVKQILHEFVQ 592


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 202/414 (48%), Gaps = 9/414 (2%)

Query: 63  ASPLKERIDIFDSIKKDGTN---WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           A  ++   D   +I++ G+     S   +N  L +L   +  E   + +S+    GL P+
Sbjct: 123 AEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPD 182

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           + T++ MI+ YC + D   A +    + + G  P   T   LV   C++G L++A  +  
Sbjct: 183 TVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFL 242

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M  +GC+ N  +Y  L++GLC    V EA  + + +K DG  P+V  +T ++ G CK G
Sbjct: 243 MMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSG 302

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R  +A  L +   + GV P+V+T+N +  GY K G     + + +LM+K  C PD  +Y+
Sbjct: 303 RVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYN 362

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL+ GL    K   A  +    V+ GF        +L+ G CM    EK   +DA ++  
Sbjct: 363 TLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA---EK--FDDALRMKN 416

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           KM       D   +G +I +L K  +  EA   L+     G +P  IT+ ++I   C  G
Sbjct: 417 KMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSG 476

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           K+D AL +L +M      P+  +Y+ L+  L + +K + A AL     K G+IP
Sbjct: 477 KVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIP 530



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 198/412 (48%), Gaps = 9/412 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + I + ++K+G +     +N L+  L    + E A +  + A   G  P   
Sbjct: 335 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVV 393

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  YC    F +A ++ + M  +    ++  F  L+NSL K  RLKEA E+L+++
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 453

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN+ TY  ++ G C  G+V+ A E+L  ++ DG +P+ +TY ++M G  K  + 
Sbjct: 454 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 513

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++AM LL +  + G+ PNV+T+ TL  G C E        L ++M++    PD+ +Y+ L
Sbjct: 514 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 573

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            + L K G+   A S    +VR G  + +    +L+ G     + +    + A  + E+M
Sbjct: 574 TDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDG-----FSKAGNTDFAATLIERM 625

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +    D  TY +++  L K K+ +EAL  L      G       +  +I  +  EGK 
Sbjct: 626 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 685

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           D A  +   M      PS T+Y + I    +  +  DA  L     ++GV P
Sbjct: 686 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAP 737



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 188/389 (48%), Gaps = 9/389 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  ++E + +F  +K+DG + +V  F  L+  L        A   F      G+ P+  
Sbjct: 265 EAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVM 324

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ MI  Y       +A K+ + M  NG HP+  T+  L+  LC   + +EA E+L+  
Sbjct: 325 TYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNA 383

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P + T+  L+ G C   + ++A  M   + +   K D+  +  +++   K  R 
Sbjct: 384 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 443

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA ELLNE    G+ PNV+T+ ++ +GYCK G     + +LK+M++  C P+  +Y++L
Sbjct: 444 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 503

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL+K  K+  A+++  +M + G   +     +LL+G C    +E D  ++A+++FE M
Sbjct: 504 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC----DEHD-FDNAFRLFEMM 558

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +     D   Y ++   L K  + +EA   +   +  G     + +  +I      G  
Sbjct: 559 EQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGNT 615

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           D A  L+  M +    P   +Y +L+  L
Sbjct: 616 DFAATLIERMIDEGCTPDSYTYSVLLHAL 644



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 189/424 (44%), Gaps = 43/424 (10%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++   +++DG   +   +N L+  LV   +   A+   ++    G+ PN  T++ +++ 
Sbjct: 482 LEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG 541

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE------------- 176
            C+++DF  A ++ + M  NG  P+   + +L ++LCK+GR +EA               
Sbjct: 542 QCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVY 601

Query: 177 -------------------VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
                              ++++M   GC P+  TY+ LL  LC   R+ EA  +L  + 
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G+K  ++ YT ++D   + G+ + A  + NE    G  P+  T+    N YCKEG   
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER----MM 333
               L+  M++    PD ++Y+ L++G    G I  A S  K MV    E +      ++
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781

Query: 334 NSLLRG--LCMKSWEEKDL-----LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             LL+G    ++S +   +     L+  +Q+ E+M K        TY  +I    K  + 
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           +EA + L H    G  P    +  +I+  C     +KAL  + +M E    P   SY +L
Sbjct: 842 EEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL 901

Query: 447 ITKL 450
           +  L
Sbjct: 902 VVGL 905



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 187/439 (42%), Gaps = 57/439 (12%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L + + +   ++KDG   +V  +  LL      ++ + A + F      GL P+ 
Sbjct: 508 VKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDE 567

Query: 121 WTFSIMIRCYCNKNDFFEA-----RK---------------------------VIDCMFD 148
             ++++    C      EA     RK                           +I+ M D
Sbjct: 568 HAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMID 627

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G  P+  T+++L+++LCK  RL EAL +LDQM   G K  I  Y  L+  +   G+ + 
Sbjct: 628 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 687

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  M   + + G KP   TYT  ++ +CK GR  +A +L+ +    GV P+VVT+N L +
Sbjct: 688 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK--------------WGKIRPA 314
           G    G   +    LK M   +C P+  +Y  LL  LLK              W  I   
Sbjct: 748 GCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELD 807

Query: 315 VS--IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
           ++  + + MV+ G        +SL+ G C     +   LE+A  + + M  K    +   
Sbjct: 808 ITWQLLERMVKHGLNPTVTTYSSLIAGFC-----KAGRLEEACLLLDHMCGKGLSPNEDI 862

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA----LLLL 428
           Y ++I+     K  ++AL  +    E G  P+  ++  ++  LC EG  +K       LL
Sbjct: 863 YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 922

Query: 429 FLMYEHAKIPSRTSYDMLI 447
            L Y H ++  +   D L+
Sbjct: 923 ELGYNHDEVAWKILNDGLL 941



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 178/429 (41%), Gaps = 24/429 (5%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK   LKE  ++ + I  +G   +V  +  ++       + + A++        G  PN+
Sbjct: 438 IKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNA 497

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           WT++ ++          +A  ++  M  +G  PNV T+T L+   C       A  + + 
Sbjct: 498 WTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEM 557

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + G KP+   Y  L   LC  GR EEAY  ++     G+      YT ++DGF K G 
Sbjct: 558 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGN 614

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           ++ A  L+   I+ G TP+  T++ L +  CK+    + + +L  M  R       +Y+ 
Sbjct: 615 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++ +L+ GK   A  ++ EM   G +         +   C     ++  LEDA  +  K
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC-----KEGRLEDAEDLILK 729

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG- 419
           M ++    D  TY I+I   G     D A   L   +     P   T+  +++ L     
Sbjct: 730 MEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNL 789

Query: 420 ---------------KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
                          ++D    LL  M +H   P+ T+Y  LI    +  +  +AC L  
Sbjct: 790 AYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLD 849

Query: 465 AALKQGVIP 473
               +G+ P
Sbjct: 850 HMCGKGLSP 858



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 18/261 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L++  D+   ++++G    V  +N L+     +   + A             PN W
Sbjct: 716 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYW 775

Query: 122 TFSIMIRCYCNKNDFFEARKV-----------------IDCMFDNGYHPNVTTFTILVNS 164
           T+ ++++ +  K +    R V                 ++ M  +G +P VTT++ L+  
Sbjct: 776 TYCLLLK-HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAG 834

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
            CK+GRL+EA  +LD M   G  PN   Y  L+K  C     E+A   +  +   G +P 
Sbjct: 835 FCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQ 894

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           + +Y  ++ G C  G   +   L  + +E G   + V +  L +G  K G       +L 
Sbjct: 895 LESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLS 954

Query: 285 LMKKRNCLPDKISYSTLLNGL 305
           +M+KR C     +Y+ + N +
Sbjct: 955 IMEKRYCCISSQTYALVTNKM 975


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 204/424 (48%), Gaps = 45/424 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L++ +D F+ +       +   +N ++ ALV     + A K +    + G++P+  
Sbjct: 62  RAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLH 121

Query: 122 TFSIMIRCYC-------------------------------NKNDFFEARKVIDCMFDNG 150
           T +I +R +C                                     +AR++ D M    
Sbjct: 122 THTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTH 181

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PN+  F  ++++LCK G + EA  +L ++ + G   N+ TYN  ++GLC  GR+ EA 
Sbjct: 182 VFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV 241

Query: 211 EMLMNVKNDGLK----PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            ++     DG++    PDV TY  ++ G CK     EAM  L   + +G  P+  T+NT+
Sbjct: 242 RLV-----DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 296

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +GYCK     +   LLK    +  +PD+++Y +L+NGL   G +  A+ +F E    G 
Sbjct: 297 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI 356

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + D  + NSL++GLC++      L+  A QV  +M ++    D  TY IVI  L K    
Sbjct: 357 KPDIVVYNSLVKGLCLQG-----LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +A + ++ AI  G++P   TFN +I   C   K+D AL L+  M+E+   P   +Y+ +
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471

Query: 447 ITKL 450
           +  L
Sbjct: 472 LNGL 475



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 209/451 (46%), Gaps = 47/451 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           +A  L E + + D ++     ++V D   +N L+  L   +  + A+ +     + G  P
Sbjct: 233 EAGRLPEAVRLVDGMRA----YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLP 288

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           + +T++ +I  YC  +   EA +++      G+ P+  T+  L+N LC  G ++ ALE+ 
Sbjct: 289 DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELF 348

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           ++    G KP+I  YN L+KGLC  G +  A +++  +  +G  PD+ TY  V++G CK+
Sbjct: 349 NEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKM 408

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G  ++A  ++N+AI +G  P+V TFNTL +GYCK       + L++ M +    PD I+Y
Sbjct: 409 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITY 468

Query: 299 STLLNGLLKWGKIRPAVSIFKEMV-----------------------------------R 323
           +++LNGL K GK+      F+EM+                                   +
Sbjct: 469 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 528

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D    N+L+ G C         LE AY +F+K+ +K       T+  +I      
Sbjct: 529 EGLHPDAVSFNTLIYGFC-----RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 583

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
                A       +  GH   + T+  +I   C    +D+A + L  M +   IPS +++
Sbjct: 584 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 643

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             +I  L    + + A  +    +K GV+P+
Sbjct: 644 GRVINSLTVNHRVFQAVGIIHIMVKIGVVPE 674



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 169/349 (48%), Gaps = 30/349 (8%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+  L    + E A++ F+EA + G+ P+   ++ +++  C +     A +V++ M 
Sbjct: 328 YCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMA 387

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G HP++ T+ I++N LCK G + +A  V++     G  P++ T+N L+ G C   +++
Sbjct: 388 EEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLD 447

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A +++  +   G+ PD  TY +V++G CK G+ NE  E   E I +G  PN +T+N L 
Sbjct: 448 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 507

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             +C+     +   ++  M +    PD +S++TL+ G  + G +  A  +F+++   G+ 
Sbjct: 508 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 567

Query: 328 VDERMMNSLL---------------------RGLCMKSWEEKDLLED---------AYQV 357
                 N+L+                     +G    S+  + L++          AY  
Sbjct: 568 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 627

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
             +M KK  +    T+G VI +L    +  +A+  +H  +++G +P  +
Sbjct: 628 LVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 142/330 (43%), Gaps = 40/330 (12%)

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
           HP    +   + +  ++GRL++A++  ++M    C P    YN ++  L      ++A++
Sbjct: 50  HP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHK 106

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG---------------- 255
           + + +   G+ PD++T+T  +  FC   R + A+ LL     RG                
Sbjct: 107 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 166

Query: 256 ---------------VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
                          V PN+  FN + +  CK G  ++   LL  + +R    +  +Y+ 
Sbjct: 167 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
            + GL + G++  AV +   M  +    D    N+L+RGLC KS     + ++A     +
Sbjct: 227 WIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKS-----MPQEAMHYLRR 280

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +  + D  TY  +I    K     EA   L  A+  G +P  +T+ ++I  LC EG 
Sbjct: 281 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 340

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +++AL L          P    Y+ L+  L
Sbjct: 341 VERALELFNEAQAKGIKPDIVVYNSLVKGL 370



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 141/300 (47%), Gaps = 6/300 (2%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D+I K G    V  FN L+       + ++A++       YG+AP++ T++ ++   C  
Sbjct: 420 DAIMK-GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 478

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
               E  +    M   G HPN  T+ IL+ + C+S +++EA +V+ +M + G  P+  ++
Sbjct: 479 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 538

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+ G C  G +E AY +   ++  G      T+  ++  F      + A ++ +E + 
Sbjct: 539 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 598

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           +G   +  T+  L +G CK     +    L  M K+  +P   ++  ++N L    ++  
Sbjct: 599 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 658

Query: 314 AVSIFKEMVRFGF--EVDERMMNSLLRGLCMKSWEEKDLLED---AYQVFEKMTKKVSVT 368
           AV I   MV+ G   EV + ++N+  + +       +DL++    +Y  +E + + V  T
Sbjct: 659 AVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHISYPTYEVLHEGVQST 718



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 121/283 (42%), Gaps = 10/283 (3%)

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y   ++     GR+ +A +    +      P    Y A+MD        ++A ++    +
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
             GV+P++ T       +C    P   + LL+ +  R      ++Y T++ GL   G   
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 168

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A  +F +M+      +    N +L  LC +     D+LE    + + + + +S+ +  T
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRG----DVLEAGLLLGKVIQRGMSI-NLFT 223

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y I IR L +  +  EA + L   +    +P  +T+N +I+ LC +    +A+  L  M 
Sbjct: 224 YNIWIRGLCEAGRLPEA-VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 282

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
               +P   +Y+ +I    ++    +A  L   A+ +G +P +
Sbjct: 283 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQ 325



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 17/262 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E  + F  +   G + +   +N L+      N+ E A K   + S  GL P++ 
Sbjct: 477 KAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAV 536

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F+ +I  +C   D   A  +   + + GY     TF  L+ +      +  A ++ D+M
Sbjct: 537 SFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEM 596

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + +  TY  L+ G C    V+ AY  L+ +   G  P + T+  V++      R 
Sbjct: 597 LSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRV 656

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST- 300
            +A+ +++  ++ GV P VV  +T+ N   KE    K + +  LMKK +     ISY T 
Sbjct: 657 FQAVGIIHIMVKIGVVPEVV--DTILNADKKEIAAPK-ILVEDLMKKGH-----ISYPTY 708

Query: 301 --LLNGL------LKWGKIRPA 314
             L  G+      L++GK R +
Sbjct: 709 EVLHEGVQSTIYCLEYGKQRAS 730


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 204/424 (48%), Gaps = 45/424 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L++ +D F+ +       +   +N ++ ALV     + A K +    + G++P+  
Sbjct: 63  RAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLH 122

Query: 122 TFSIMIRCYC-------------------------------NKNDFFEARKVIDCMFDNG 150
           T +I +R +C                                     +AR++ D M    
Sbjct: 123 THTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTH 182

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PN+  F  ++++LCK G + EA  +L ++ + G   N+ TYN  ++GLC  GR+ EA 
Sbjct: 183 VFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV 242

Query: 211 EMLMNVKNDGLK----PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            ++     DG++    PDV TY  ++ G CK     EAM  L   + +G  P+  T+NT+
Sbjct: 243 RLV-----DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 297

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +GYCK     +   LLK    +  +PD+++Y +L+NGL   G +  A+ +F E    G 
Sbjct: 298 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI 357

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + D  + NSL++GLC++      L+  A QV  +M ++    D  TY IVI  L K    
Sbjct: 358 KPDIVVYNSLVKGLCLQG-----LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +A + ++ AI  G++P   TFN +I   C   K+D AL L+  M+E+   P   +Y+ +
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472

Query: 447 ITKL 450
           +  L
Sbjct: 473 LNGL 476



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 209/451 (46%), Gaps = 47/451 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           +A  L E + + D ++     ++V D   +N L+  L   +  + A+ +     + G  P
Sbjct: 234 EAGRLPEAVRLVDGMRA----YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLP 289

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           + +T++ +I  YC  +   EA +++      G+ P+  T+  L+N LC  G ++ ALE+ 
Sbjct: 290 DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELF 349

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           ++    G KP+I  YN L+KGLC  G +  A +++  +  +G  PD+ TY  V++G CK+
Sbjct: 350 NEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKM 409

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G  ++A  ++N+AI +G  P+V TFNTL +GYCK       + L++ M +    PD I+Y
Sbjct: 410 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITY 469

Query: 299 STLLNGLLKWGKIRPAVSIFKEMV-----------------------------------R 323
           +++LNGL K GK+      F+EM+                                   +
Sbjct: 470 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 529

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D    N+L+ G C         LE AY +F+K+ +K       T+  +I      
Sbjct: 530 EGLHPDAVSFNTLIYGFC-----RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 584

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
                A       +  GH   + T+  +I   C    +D+A + L  M +   IPS +++
Sbjct: 585 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 644

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             +I  L    + + A  +    +K GV+P+
Sbjct: 645 GRVINSLTVNHRVFQAVGIIHIMVKIGVVPE 675



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 142/330 (43%), Gaps = 40/330 (12%)

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
           HP    +   + +  ++GRL++A++  ++M    C P    YN ++  L      ++A++
Sbjct: 51  HP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHK 107

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG---------------- 255
           + + +   G+ PD++T+T  +  FC   R + A+ LL     RG                
Sbjct: 108 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 167

Query: 256 ---------------VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
                          V PN+  FN + +  CK G  ++   LL  + +R    +  +Y+ 
Sbjct: 168 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
            + GL + G++  AV +   M  +    D    N+L+RGLC KS     + ++A     +
Sbjct: 228 WIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKS-----MPQEAMHYLRR 281

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +  + D  TY  +I    K     EA   L  A+  G +P  +T+ ++I  LC EG 
Sbjct: 282 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 341

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +++AL L          P    Y+ L+  L
Sbjct: 342 VERALELFNEAQAKGIKPDIVVYNSLVKGL 371



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 141/300 (47%), Gaps = 6/300 (2%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D+I K G    V  FN L+       + ++A++       YG+AP++ T++ ++   C  
Sbjct: 421 DAIMK-GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 479

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
               E  +    M   G HPN  T+ IL+ + C+S +++EA +V+ +M + G  P+  ++
Sbjct: 480 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 539

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+ G C  G +E AY +   ++  G      T+  ++  F      + A ++ +E + 
Sbjct: 540 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 599

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           +G   +  T+  L +G CK     +    L  M K+  +P   ++  ++N L    ++  
Sbjct: 600 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 659

Query: 314 AVSIFKEMVRFGF--EVDERMMNSLLRGLCMKSWEEKDLLED---AYQVFEKMTKKVSVT 368
           AV I   MV+ G   EV + ++N+  + +       +DL++    +Y  +E + + V  T
Sbjct: 660 AVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHISYPTYEVLHEGVQST 719



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 121/283 (42%), Gaps = 10/283 (3%)

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y   ++     GR+ +A +    +      P    Y A+MD        ++A ++    +
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
             GV+P++ T       +C    P   + LL+ +  R      ++Y T++ GL   G   
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 169

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A  +F +M+      +    N +L  LC +     D+LE    + + + + +S+ +  T
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRG----DVLEAGLLLGKVIQRGMSI-NLFT 224

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y I IR L +  +  EA + L   +    +P  +T+N +I+ LC +    +A+  L  M 
Sbjct: 225 YNIWIRGLCEAGRLPEA-VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 283

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
               +P   +Y+ +I    ++    +A  L   A+ +G +P +
Sbjct: 284 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQ 326



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 17/262 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E  + F  +   G + +   +N L+      N+ E A K   + S  GL P++ 
Sbjct: 478 KAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAV 537

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F+ +I  +C   D   A  +   + + GY     TF  L+ +      +  A ++ D+M
Sbjct: 538 SFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEM 597

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + +  TY  L+ G C    V+ AY  L+ +   G  P + T+  V++      R 
Sbjct: 598 LSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRV 657

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST- 300
            +A+ +++  ++ GV P VV  +T+ N   KE    K + +  LMKK +     ISY T 
Sbjct: 658 FQAVGIIHIMVKIGVVPEVV--DTILNADKKEIAAPK-ILVEDLMKKGH-----ISYPTY 709

Query: 301 --LLNGL------LKWGKIRPA 314
             L  G+      L++GK R +
Sbjct: 710 EVLHEGVQSTIYCLEYGKQRAS 731


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 195/378 (51%), Gaps = 8/378 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ DF+    A+    +    + F  +    G+A N +T +IMI C+C       A  V+
Sbjct: 87  SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   GY P+ TTF  L+  L   G++ EA+ ++D+M   GC+P++ TYN ++ G+C  
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A ++L  ++   +K DV+TY+ ++D  C+ G  + A+ L  E   +G+  +VVT+
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L  G CK G    G  LLK M  R  +P+ I+++ LL+  +K GK++ A  ++KEM+ 
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   +    N+L+ G CM++      L +A  + + M +     D  T+  +I+     
Sbjct: 327 RGISPNIITYNTLMDGYCMQNR-----LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           K+ D+ +    +  + G +   +T++ ++Q  C  GKI  A  L   M  H  +P   +Y
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 444 DMLITKL---DQLEKSYD 458
            +L+  L    +LEK+ +
Sbjct: 442 GILLDGLCDNGKLEKALE 459



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 182/384 (47%), Gaps = 9/384 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D + ++G    V  +N ++  +    +   A+    +     +  + +T+S 
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C       A  +   M   G   +V T+  LV  LCK+G+  +   +L  M    
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ T+N LL      G+++EA E+   +   G+ P++ TY  +MDG+C   R +EA 
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +L+  +    +P++VTF +L  GYC       G+ + + + KR  + + ++YS L+ G 
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + GKI+ A  +F+EMV  G   D      LL GLC     +   LE A ++FE + K  
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC-----DNGKLEKALEIFEDLQK-- 466

Query: 366 SVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           S  D G   Y  +I  + KG K ++A          G  P  +T+  +I  LC +G + +
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLI 447
           A +LL  M E    P+  +Y+ LI
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLI 550



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 193/413 (46%), Gaps = 16/413 (3%)

Query: 23  IPQFNKLVVFAAASLSTAESLDL--KENPRSLQAQRF-----VDRI-KASPLKERIDIFD 74
           +  +N +V     S  T+ +LDL  K   R+++A  F     +D + +   +   I +F 
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
            ++  G   SV  +N L+  L    +         +  S  + PN  TF++++  +  + 
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
              EA ++   M   G  PN+ T+  L++  C   RL EA  +LD M R  C P+I T+ 
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+KG C V RV++  ++  N+   GL  +  TY+ ++ GFC+ G+   A EL  E +  
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           GV P+V+T+  L +G C  G   K + + + ++K       + Y+T++ G+ K GK+  A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
            ++F  +   G + +      ++ GLC     +K  L +A  +  KM +  +  +  TY 
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLC-----KKGSLSEANILLRKMEEDGNAPNDCTYN 547

Query: 375 IVIRT-LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
            +IR  L  G  T  A + +      G      +   VI  L   G++DK+ L
Sbjct: 548 TLIRAHLRDGDLTASAKL-IEEMKSCGFSADASSIKMVIDMLL-SGELDKSFL 598



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 5/251 (1%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P +  ++       +  + N  ++   +    G+  N+ T N + N +C+         +
Sbjct: 86  PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L  + K    PD  +++TL+ GL   GK+  AV +   MV  G + D    NS++ G+C 
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC- 204

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
           +S +       A  +  KM ++    D  TY  +I +L +    D A+         G  
Sbjct: 205 RSGDT----SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
              +T+N++++ LC  GK +   LLL  M     +P+  ++++L+    +  K  +A  L
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 463 YGAALKQGVIP 473
           Y   + +G+ P
Sbjct: 321 YKEMITRGISP 331


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 200/411 (48%), Gaps = 8/411 (1%)

Query: 38  STAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM 97
           ++ ES +      SL+ Q     IK   L++ ID+F  + +     SV DF  L+  +V 
Sbjct: 34  ASGESCEAGFGGESLKLQSGFHEIKG--LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVR 91

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           +   +  +  + +     +  + ++F+I+I+C+C+ +    A      +   G HP+V T
Sbjct: 92  MERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVT 151

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F  L++ LC   R+ EAL +  QM    C+PN+ T+  L+ GLC  GR+ EA  +L  + 
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE-RGVTPNVVTFNTLFNGYCKEGTP 276
            DGL+P   TY  ++DG CK+G +  A++LL +  E   + PNVV ++ + +  CK+G  
Sbjct: 212 EDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRH 271

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                L   M+++   PD  +Y++++ G    G+   A  + +EM+      D    N+L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +        +E    E A +++++M  +  + +  TY  +I    K  + D A    +  
Sbjct: 332 INAF----VKEGKFFE-AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              G  P  ITFN +I   CG  +ID  + LL  M E   +   T+Y+ LI
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 181/381 (47%), Gaps = 16/381 (4%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F+E    G+ P+ +T++ MI  +C+   + +A +++  M +    P+V T+  L+N
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +  K G+  EA E+ D+M   G  PN  TY+ ++ G C   R++ A  M   +   G  P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           ++ T+  ++DG+C   R ++ MELL+E  E G+  +  T+NTL +G+   G     + LL
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-----------GFEVDERM 332
           + M      PD ++  TLL+GL   GK++ A+ +FK M +            G E D + 
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+ GL      E   LE A +++E+M  +  V D  TY  +I  L K  + DEA   
Sbjct: 514 YNILISGL----INEGKFLE-AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
                     P  +TF  +I   C  G++D  L L   M     + +  +Y  LI    +
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628

Query: 453 LEKSYDACALYGAALKQGVIP 473
           +     A  ++   +  GV P
Sbjct: 629 VGNINGALDIFQEMISSGVYP 649



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 214/491 (43%), Gaps = 87/491 (17%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L   +  F  I K G +  V  FN LL  L + +    A+  F +       PN  TF
Sbjct: 128 SKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHP------------------------------ 153
           + ++   C +    EA  ++D M ++G  P                              
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEE 247

Query: 154 ------NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                 NV  ++ +++SLCK GR  +A  +  +M   G  P++ TYN ++ G C  GR  
Sbjct: 248 ISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV----------- 256
           +A ++L  +    + PDV TY A+++ F K G+  EA EL +E + RG+           
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367

Query: 257 ------------------------TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                                   +PN++TFNTL +GYC       G+ LL  M +   +
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLV 427

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            D  +Y+TL++G    G +  A+ + +EM+  G   D    ++LL GLC  + + KD LE
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDALE 486

Query: 353 DAYQVFEKMTKKVSVTDP--------GTYGIVIRTL---GKGKKTDEALIHLHHAIEMGH 401
             ++V +K  K +  + P         TY I+I  L   GK  + +E    + H    G 
Sbjct: 487 -MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR---GI 542

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           +P TIT++++I  LC + ++D+A  +   M   +  P+  ++  LI    +  +  D   
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 462 LYGAALKQGVI 472
           L+    ++G++
Sbjct: 603 LFCEMGRRGIV 613



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 168/335 (50%), Gaps = 17/335 (5%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D   K + L     +F  +   G + ++  FN L+         +  ++ 
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E +  GL  ++ T++ +I  +    D   A  ++  M  +G  P++ T   L++ LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 168 SGRLKEALEVLDQMGRI-----------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           +G+LK+ALE+   M +            G +P++QTYN L+ GL   G+  EA E+   +
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            + G+ PD  TY++++DG CK  R +EA ++ +    +  +PNVVTF TL NGYCK G  
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
             G+ L   M +R  + + I+Y TL+ G  K G I  A+ IF+EM+  G   D   + ++
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           L GL    W  K+ L+ A  + EK+   + ++  G
Sbjct: 658 LTGL----W-SKEELKRAVAMLEKLQMSMDLSFGG 687



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 134/304 (44%), Gaps = 41/304 (13%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           L++A+++   M R    P++  +  L+  +  + R +    +   ++   ++ D+Y++T 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++  FC   +   A+    +  + G+ P+VVTFNTL +G C E    + + L   M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C P+ ++++TL+NGL + G+I  AV++            +RMM                 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALL-----------DRMM----------------- 211

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFN 409
            ED  Q  +            TYG ++  + K   T  AL  L    E+ HI P  + ++
Sbjct: 212 -EDGLQPTQI-----------TYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYS 259

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I +LC +G+   A  L   M E    P   +Y+ +I       +  DA  L    L++
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 470 GVIP 473
            + P
Sbjct: 320 KISP 323


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 175/325 (53%), Gaps = 5/325 (1%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           FS  ++  C ++   +A K++D M + G  P+V T+ +L+N +CK GRL EA++ L+ M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             GC+PN+ T+N +L+ +C  GR  +A ++L ++   G  P V T+  +++  C+ G   
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
            A+++L +    G TPN +++N L +G+CKE    + +  L +M  R C PD ++Y+TLL
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
             L K GK+  AV I  ++   G        N+++ GL      E+     A ++ ++M 
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTER-----AIKLLDEMR 319

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +K    D  TY  ++  L +  K DEA+   H    +G  P  IT+N+++  LC   + D
Sbjct: 320 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 379

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLI 447
           +A+  L  M      P+  +Y +LI
Sbjct: 380 RAIDFLAYMISKRCKPTEATYTILI 404



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 184/344 (53%), Gaps = 5/344 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S + + + + D ++  G+   V  +N L+  +      + A+KF +   SYG  PN  
Sbjct: 94  KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 153

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T +I++R  C+   + +A K++  M   G  P+V TF IL+N LC+ G L  A+++L++M
Sbjct: 154 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 213

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PN  +YN LL G C   +++ A E L  + + G  PD+ TY  ++   CK G+ 
Sbjct: 214 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 273

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+E+LN+   +G +P ++T+NT+ +G  K G   + + LL  M+++   PD I+YS+L
Sbjct: 274 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 333

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL + GK+  A+  F ++   G   +    NS++ GLC     ++ +   AY +    
Sbjct: 334 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMI---- 389

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
           +K+   T+  TY I+I  +       EAL  L+     G + ++
Sbjct: 390 SKRCKPTE-ATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKS 432



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 179/346 (51%), Gaps = 5/346 (1%)

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
           +S+S F+  +      +    A+K   E  + G  P+  T++++I   C +    EA K 
Sbjct: 80  FSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 139

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           ++ M   G  PNV T  I++ S+C +GR  +A ++L  M R GC P++ T+N L+  LC 
Sbjct: 140 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 199

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            G +  A ++L  +   G  P+  +Y  ++ GFCK  + + A+E L+  + RG  P++VT
Sbjct: 200 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 259

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           +NTL    CK+G     V +L  +  + C P  I+Y+T+++GL K GK   A+ +  EM 
Sbjct: 260 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 319

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
           R G + D    +SL+ GL   S E K  +++A + F  +       +  TY  ++  L K
Sbjct: 320 RKGLKPDIITYSSLVSGL---SREGK--VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCK 374

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            ++TD A+  L + I     P   T+  +I+ +  EG   +AL LL
Sbjct: 375 SRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLL 420



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 130/273 (47%), Gaps = 5/273 (1%)

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C    V +A ++L  ++N G KPDV TY  +++G CK GR +EA++ LN     G  PNV
Sbjct: 93  CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 152

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           +T N +    C  G  M    LL  M ++ C P  ++++ L+N L + G +  A+ I ++
Sbjct: 153 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 212

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M   G   +    N LL G C    +EK + + A +  + M  +    D  TY  ++  L
Sbjct: 213 MPMHGCTPNSLSYNPLLHGFC----KEKKM-DRAIEYLDIMVSRGCYPDIVTYNTLLTAL 267

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K  K D A+  L+     G  P  IT+N VI  L   GK ++A+ LL  M      P  
Sbjct: 268 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 327

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +Y  L++ L +  K  +A   +      G+ P
Sbjct: 328 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP 360


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 210/411 (51%), Gaps = 7/411 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E +D+F  +   G    V  ++ L+  L      + A++FF E    G++ + +T++ +I
Sbjct: 164 EALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLI 223

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                   + E    ++ M D G+ P+  TFTIL++ LCK G++ EA ++L+ M   G +
Sbjct: 224 HGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKE 283

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+I TYN L+ GLC VG++E+A ++  ++ + G+K +V++Y  +++G+CK  + +EA  L
Sbjct: 284 PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRL 343

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E   +G+ P+ VT+NTL    C+ G       L   M+         +Y  LL+GL K
Sbjct: 344 FEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCK 403

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G +  A+ +F+ + +   + +  + + LL G+C         LE+A++ F++++K    
Sbjct: 404 NGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMC-----RAGKLEEAWKQFDEISKNGLE 458

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D   Y I+I  L       EA+  L    E G +P +ITFN +IQ L  E +I +A+ L
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 518

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV--IPQRK 476
           L  M      P      ML+       + + A      AL++GV  +P ++
Sbjct: 519 LEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGVGSVPVKR 569



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 153/285 (53%), Gaps = 3/285 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   I + +   G    +  +N L+  L ++ + E A K F   +  G+  N +
Sbjct: 263 KEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF 322

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I+I  YC      EA ++ + M   G  P+  T+  L+ +LC+SGR++ A ++  +M
Sbjct: 323 SYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM 382

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G    + TY  LL GLC  G +EEA ++  ++K    KP++  ++ ++DG C+ G+ 
Sbjct: 383 QTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKL 442

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +  +E  + G+ P+ + +N L NG C +G   + V LL  M+++ CLPD I+++ +
Sbjct: 443 EEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVI 502

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           +  LLK  +I  A+ + +EM    F  DE + + L   LC+ S++
Sbjct: 503 IQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML---LCLASFD 544



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 167/325 (51%), Gaps = 5/325 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LKE ++ F  ++  G +  V  +N L+  L      +    F +     G +P+++TF+I
Sbjct: 197 LKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTI 256

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C +    EA+++++ M   G  P++ T+  L+N LC  G+L++A ++ + +   G
Sbjct: 257 LIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 316

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            K N+ +YN L+ G C   +++EA+ +   ++  GLKP   TY  ++   C+ GR   A 
Sbjct: 317 IKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 376

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L  E    G    + T+  L +G CK G   + + L + +KK    P+   +S LL+G+
Sbjct: 377 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGM 436

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + GK+  A   F E+ + G E D    N L+ GLC      K +L +A ++  +M +K 
Sbjct: 437 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLC-----NKGMLSEAVKLLWQMEEKG 491

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEAL 390
            + D  T+ ++I+ L K  +  EA+
Sbjct: 492 CLPDSITFNVIIQNLLKENEIHEAI 516



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 189/383 (49%), Gaps = 6/383 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  + M N    AV+ F E +  GL  ++ T+ I+I   C       A K+ + M  N 
Sbjct: 83  LVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGN- 141

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +V T+ ++++SLCK G   EAL++  +M   G  P++  Y+ L+ GLC  GR++EA 
Sbjct: 142 CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 201

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E    ++  G+  DVYTY +++ G  + G   E    LN  ++RG +P+  TF  L +G 
Sbjct: 202 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 261

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CKEG   +   +L+LM  +   PD ++Y+TL+NGL   G++  A  +F+ +   G +++ 
Sbjct: 262 CKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 321

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N L+ G C     +   +++A+++FE+M  K       TY  +I  L +  +   A 
Sbjct: 322 FSYNILINGYC-----KDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 376

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                    G   +  T+  ++  LC  G +++A+ L   + +    P+   + +L+  +
Sbjct: 377 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGM 436

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +  K  +A   +    K G+ P
Sbjct: 437 CRAGKLEEAWKQFDEISKNGLEP 459



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 6/165 (3%)

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           KR   PD ++ +TL+ G+     I  AV +F EM   G   D +    L+ GLC      
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKA---R 126

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           K  L  A ++ EKM K     D  TYG++I +L K   T EAL      I  G +P  + 
Sbjct: 127 KTGL--AIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVV 183

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           +++++  LC  G++ +AL     M          +Y+ LI  L +
Sbjct: 184 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSR 228



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 6/150 (4%)

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           ++ GFE D   + +L++G+ M++      + DA Q+F++MT+K    D  TYGI+I  L 
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENG-----IPDAVQLFDEMTEKGLFGDAKTYGILINGLC 123

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K +KT  A I LH  ++        T+  +I +LC +G   +AL +   M     +P   
Sbjct: 124 KARKTGLA-IKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVV 182

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGV 471
            Y  L+  L +  +  +A   +     +G+
Sbjct: 183 VYSSLMDGLCRFGRLKEALEFFKEMEGRGI 212


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 195/388 (50%), Gaps = 6/388 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++     L   + A +   + +  G  P+  T+  +I   C   D   A  V +   
Sbjct: 323 YNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAM 382

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  PN+     LV  L + G + +AL+++++M   GC P+I TYN ++ GLC +G V 
Sbjct: 383 EKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVS 442

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  ++++    G  PDV+T+  ++DG+CK  + + A+E+++     GV+P+V+T+N++ 
Sbjct: 443 DADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSIL 502

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG CK G     +G  KLM ++ C+P+ I+Y+ L     K  K+  A+++ +EM   G  
Sbjct: 503 NGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLT 562

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP-GTYGIVIRTLGKGKKT 386
            D     +L++G C     +   L+ AYQ+F+++ ++   +    TY I+I         
Sbjct: 563 PDVVNFGTLMKGFC-----DNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNM 617

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           + A    +   E G  P + T+  +I   C  G I+     L +  E   IPS T++  +
Sbjct: 618 NMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRV 677

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +  L    + ++A  +    + +G++P+
Sbjct: 678 LNCLCLKRRVHEAVGIIHLMVHKGIVPE 705



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 208/442 (47%), Gaps = 31/442 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   ++E +D+F+ +       SV  +N ++  LV     + A K +      G+ P+ +
Sbjct: 88  RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVY 147

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I ++ +C  +    AR++++ M   G   +   +  ++    +     EA E+ ++M
Sbjct: 148 TFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM 207

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G  P+I  +N L+  LC  G V+E+  +L  V   G+ P+++T    + GFC+    
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAML 267

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           NEA+ LL + + RG+TP+V+T+NTL  G CK    ++    L+ M      PD  +Y+++
Sbjct: 268 NEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI 326

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-------------------- 341
           ++G  K G ++ A  I ++    GF  DE    SL+ GLC                    
Sbjct: 327 IDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGL 386

Query: 342 ----------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
                     +K   ++ L+  A ++  +M++     D  TY +VI  L K     +A  
Sbjct: 387 KPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADN 446

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            +  AI  GH+P   TFN +I   C + K+D A+ ++  M+ H   P   +Y+ ++  L 
Sbjct: 447 LVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLC 506

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           +  K  D    +   +++G +P
Sbjct: 507 KAGKYEDVMGTFKLMMEKGCVP 528



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 206/463 (44%), Gaps = 49/463 (10%)

Query: 49  PRSLQAQRFVDRIKASPLKERIDIFDSIKK-DGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P+ + A   V + + +PLK  ++IF+S+KK DG   ++  +  ++  L    E E   + 
Sbjct: 7   PKHVAA---VVKYQKNPLKA-LEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEV 62

Query: 108 FSEAS---SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
            +E       GL    +  ++  R Y  K    EA  V + M      P+V ++  ++N 
Sbjct: 63  LAETRMNIDNGLLEGVYIGAM--RNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNI 120

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           L +     +A +V  +M   G  P++ T+   +K  C   R   A  +L N+ + G +  
Sbjct: 121 LVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESS 180

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL- 283
              Y  V+ GF +     EA EL  E +  G+ P+++ FN L +  C++G   +   LL 
Sbjct: 181 AVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLN 240

Query: 284 KLMKK---------------------------------RNCLPDKISYSTLLNGLLKWGK 310
           K++K+                                 R   PD I+Y+TL+ GL K  K
Sbjct: 241 KVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFK 300

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A    ++MV  G+E D    NS++ G C     +  ++++A Q+      K  V D 
Sbjct: 301 VVEAEHYLRKMVNEGYEPDGFTYNSIIDGYC-----KLGMMQNADQILRDGAFKGFVPDE 355

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I  L +    D A+   + A+E G  P  +  N +++ L  +G I +AL L+  
Sbjct: 356 STYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNE 415

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M E+   P   +Y+++I  L ++    DA  L   A+ +G +P
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLP 458



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 37/262 (14%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D+I K G    V  FN L+       + + A++      ++G++P+  T++ ++   C
Sbjct: 448 VIDAIAK-GHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLC 506

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
               + +       M + G  PN+ T+ IL  S CK+ +++EAL ++++M   G  P++ 
Sbjct: 507 KAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVV 566

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKN--------------------------------- 218
            +  L+KG C  G ++ AY++   V                                   
Sbjct: 567 NFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNK 626

Query: 219 ---DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
              +G  PD YTY  ++DGFCK G  N     L   IE+G+ P++ TF  + N  C +  
Sbjct: 627 MCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRR 686

Query: 276 PMKGVGLLKLMKKRNCLPDKIS 297
             + VG++ LM  +  +P+ ++
Sbjct: 687 VHEAVGIIHLMVHKGIVPEVVN 708


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 189/382 (49%), Gaps = 5/382 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
             + I  F  ++K            L   L+ LN    A  F+ E    G  P+   F++
Sbjct: 171 FSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNV 230

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C ++   EA+ +   +   G  P V +F  L+N  CKSG L +   +   M    
Sbjct: 231 LMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR 290

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ TY+ L+ GLC  G++++A ++ + + + GL P+  T+T +++G C  GR++  M
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGM 350

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+  + + +GV P+V+T+NTL NG CK G   +   L+  M +R   PDK +Y+ L++G 
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +  A+ I KEMV+ G E+D     +L+ G C     E  ++E A +   +M +  
Sbjct: 411 CKEGDLESALEIRKEMVKEGIELDNVAFTALISGFC----REGQVIE-AERTLREMLEAG 465

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY +VI    K          L      GH+P  +T+N ++  LC +G++  A 
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNAN 525

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
           +LL  M     +P   +Y++L+
Sbjct: 526 MLLDAMLNLGVVPDDITYNILL 547



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 173/347 (49%), Gaps = 5/347 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           ++ I   G    V  FN L+  L   ++   A   F E    GL P   +F+ +I  YC 
Sbjct: 213 YEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCK 272

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
             +  +  ++   M +N   P+V T+++L+N LCK G+L +A ++  +M   G  PN  T
Sbjct: 273 SGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVT 332

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           +  L+ G C  GR +   E+   +   G+KPDV TY  +++G CKVG   EA +L+ E  
Sbjct: 333 FTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMT 392

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           +RG+ P+  T+  L +G CKEG     + + K M K     D ++++ L++G  + G++ 
Sbjct: 393 QRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVI 452

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A    +EM+  G + D+     ++ G C     +K  ++  +++ ++M     V    T
Sbjct: 453 EAERTLREMLEAGIKPDDATYTMVIHGFC-----KKGDVKTGFKLLKEMQCDGHVPGVVT 507

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           Y +++  L K  +   A + L   + +G +P  IT+N +++  C  G
Sbjct: 508 YNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHG 554



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 154/302 (50%), Gaps = 16/302 (5%)

Query: 88  FNDLLMALVMLN------EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           F D+    V++N      + + A K F E    GL PN  TF+ +I  +C         +
Sbjct: 292 FPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGME 351

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           +   M   G  P+V T+  L+N LCK G L+EA +++ +M + G KP+  TY  L+ G C
Sbjct: 352 IYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCC 411

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G +E A E+   +  +G++ D   +TA++ GFC+ G+  EA   L E +E G+ P+  
Sbjct: 412 KEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDA 471

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+  + +G+CK+G    G  LLK M+    +P  ++Y+ LLNGL K G+++ A  +   M
Sbjct: 472 TYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM-TKKVSVTDPGTYGIVIRTL 380
           +  G   D+   N LL G C     E          F+K+ ++K  V D G+Y  +I  L
Sbjct: 532 LNLGVVPDDITYNILLEGHCKHGNRED---------FDKLQSEKGLVQDYGSYTSLIGDL 582

Query: 381 GK 382
            K
Sbjct: 583 RK 584



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 122/243 (50%), Gaps = 3/243 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++I+  + + G    V  +N L+  L  + +   A K   E +  GL P+ +T++++I  
Sbjct: 350 MEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDG 409

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C + D   A ++   M   G   +   FT L++  C+ G++ EA   L +M   G KP+
Sbjct: 410 CCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPD 469

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TY  ++ G C  G V+  +++L  ++ DG  P V TY  +++G CK G+   A  LL+
Sbjct: 470 DATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLD 529

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             +  GV P+ +T+N L  G+CK G         KL  ++  + D  SY++L+  L K  
Sbjct: 530 AMLNLGVVPDDITYNILLEGHCKHGNRED---FDKLQSEKGLVQDYGSYTSLIGDLRKTC 586

Query: 310 KIR 312
           K R
Sbjct: 587 KER 589



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 133/280 (47%), Gaps = 13/280 (4%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT--YNC--LLKGLCYVGR 205
           G H +   F++L+N+   SG   +A++      R+  K N+Q   ++C  L   L  +  
Sbjct: 150 GTHQSNLVFSVLMNAYTDSGYFSDAIQCF----RLVRKHNLQIPFHSCGYLFDRLMKLNL 205

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
              A+     + + G  PDV  +  +M   CK  + NEA  L  E  +RG+ P VV+FNT
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNT 265

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L NGYCK G   +G  L + M +    PD  +YS L+NGL K G++  A  +F EM   G
Sbjct: 266 LINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG 325

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              ++    +L+ G C+      DL     +++++M +K    D  TY  +I  L K   
Sbjct: 326 LVPNDVTFTTLINGHCVTG--RADL---GMEIYQQMLRKGVKPDVITYNTLINGLCKVGD 380

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
             EA   +    + G  P   T+  +I   C EG ++ AL
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESAL 420



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 9/205 (4%)

Query: 34  AASLSTAESLDLKENPRSLQAQRFVDRI------KASPLKERIDIFDSIKKDGTNWSVSD 87
              L  A+ L ++   R L+  +F   +      K   L+  ++I   + K+G       
Sbjct: 378 VGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           F  L+       +   A +   E    G+ P+  T++++I  +C K D     K++  M 
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQ 497

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G+ P V T+ +L+N LCK G++K A  +LD M  +G  P+  TYN LL+G C  G  E
Sbjct: 498 CDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRE 557

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVM 232
           + ++ L + K  GL  D  +YT+++
Sbjct: 558 D-FDKLQSEK--GLVQDYGSYTSLI 579



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 6/233 (2%)

Query: 242 NEAMELLNEAIE-RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           N A  +    +E RG   + + F+ L N Y   G     +   +L++K N      S   
Sbjct: 136 NSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGY 195

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L + L+K     PA + ++E++  G+  D    N L+  LC     ++  + +A  +F +
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLC-----KEHKINEAQLLFGE 250

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           + K+       ++  +I    K    D+        +E    P   T++ +I  LC EG+
Sbjct: 251 IGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQ 310

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +D A  L   M +   +P+  ++  LI       ++     +Y   L++GV P
Sbjct: 311 LDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKP 363



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 107/283 (37%), Gaps = 40/283 (14%)

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           ++ L+      G   +A +    V+   L+   ++   + D   K+  ++ A     E +
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           + G  P+V  FN L +  CKE    +   L   + KR   P  +S++TL+NG  K G + 
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
                       GF +   MM             E  +  D +                T
Sbjct: 278 Q-----------GFRLKRFMM-------------ENRVFPDVF----------------T 297

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y ++I  L K  + D+A        + G +P  +TF  +I   C  G+ D  + +   M 
Sbjct: 298 YSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
                P   +Y+ LI  L ++    +A  L     ++G+ P +
Sbjct: 358 RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDK 400


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 206/435 (47%), Gaps = 50/435 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDF---NDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           + S + E I ++  +  D  N    +    N +L +   L     A  FF         P
Sbjct: 163 RFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGP 222

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           + +T++ ++  YC  +D   A  V   M       N  ++T L++ LC++G+L EALE  
Sbjct: 223 DLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFW 278

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            +M   GC P ++TY  L+  LC  GR  EA  +   ++  G +P+VYTYT ++D  CK 
Sbjct: 279 ARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKE 338

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL------ 292
           GR +EA+++LNE +E+GV P+VV FN L   YCK G     VG+L LM+ +         
Sbjct: 339 GRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTY 398

Query: 293 -----------------------------PDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
                                        PD ++Y+TL++GL + G +  A  +F+ M+R
Sbjct: 399 NELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIR 458

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            GF  D+   N+ +  LC         + +A+Q+ E + +K    +   Y  +I    K 
Sbjct: 459 DGFSPDQWTFNAFMVCLC-----RMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKA 513

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            K + A       +    +P +ITFN +I  L  EGK+  A+LL+  M +    P+  +Y
Sbjct: 514 GKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTY 573

Query: 444 DMLITKLDQLEKSYD 458
           ++L+   +++ K YD
Sbjct: 574 NILV---EEVLKEYD 585



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 183/363 (50%), Gaps = 5/363 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L E ++ +  +++DG   +V  +  L+ AL     +  A+  F E    G  PN +
Sbjct: 267 EAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVY 326

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I   C +    EA K+++ M + G  P+V  F  L+ S CK G +++A+ VL  M
Sbjct: 327 TYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLM 386

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 PN++TYN L+ G C    ++ A  +L  +    L PDV TY  ++ G C+VG  
Sbjct: 387 ESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVV 446

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A  L    I  G +P+  TFN      C+ G   +   +L+ +K+++   ++ +Y+ L
Sbjct: 447 DSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTAL 506

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K GKI  A S+FK M+      +E + NS+   + +    ++  ++DA  + E M
Sbjct: 507 IDGYCKAGKIEHAASLFKRML-----AEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDM 561

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K        TY I++  + K    D A   L+  I  G+ P  +T+   I+A C +G++
Sbjct: 562 AKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRL 621

Query: 422 DKA 424
           ++A
Sbjct: 622 EEA 624



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 181/411 (44%), Gaps = 26/411 (6%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+  L  +   ++A + F      G +P+ WTF+  + C C      EA ++++
Sbjct: 430 VVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILE 489

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            + +     N   +T L++  CK+G+++ A  +  +M    C PN  T+N ++ GL   G
Sbjct: 490 SLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEG 549

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +V++A  ++ ++    +KP ++TY  +++   K    + A E+LN  I  G  PNVVT+ 
Sbjct: 550 KVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYT 609

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
                YC +G   +   ++  +K    L D   Y+ L+N     G +  A  + + M   
Sbjct: 610 AFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGT 669

Query: 325 GFEVDERMMNSLLRGLCMKS-------------------------WEEKDLLEDAYQVFE 359
           G E      + L++ L ++                          W + D       +FE
Sbjct: 670 GCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKID-FGITTVLFE 728

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           KM +   V +  TY  +I  L K  + + A    HH  E G  P  I  N+++ + C  G
Sbjct: 729 KMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLG 788

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
              +A+ LL  M E + +    SY +LI  L +      A A++ + L+ G
Sbjct: 789 MFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCG 839



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 181/414 (43%), Gaps = 34/414 (8%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   I +S+K+     +   +  L+       + E A   F    +    PNS TF++MI
Sbjct: 483 EAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMI 542

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                +    +A  +++ M      P + T+ ILV  + K      A E+L+++   G +
Sbjct: 543 DGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQ 602

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN+ TY   +K  C  GR+EEA EM++ +KN+G+  D + Y  +++ +  +G  + A  +
Sbjct: 603 PNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGV 662

Query: 248 LNEAIERGVTPNVVTFNTLFNG-----YCKEGTPMKGVG--------------------- 281
           L      G  P+ +T++ L        + KEG+   G+                      
Sbjct: 663 LRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGI 722

Query: 282 ---LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              L + M +  C+P+  +YS L+NGL K G++  A S++  M   G    E + NSLL 
Sbjct: 723 TTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLS 782

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
             C     +  +  +A  + + M +   +    +Y ++I  L +    ++A       + 
Sbjct: 783 SCC-----KLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLR 837

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            G+    + +  +I  L   G +D+   LL LM ++       +Y ML+ +L++
Sbjct: 838 CGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNR 891



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/386 (22%), Positives = 159/386 (41%), Gaps = 69/386 (17%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++    +F  +  +    +   FN ++  L    + + A+    + + + + P   
Sbjct: 512 KAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLH 571

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE----- 176
           T++I++     + DF  A ++++ +  +GY PNV T+T  + + C  GRL+EA E     
Sbjct: 572 TYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKI 631

Query: 177 ------------------------------VLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
                                         VL +M   GC+P+  TY+ L+K L      
Sbjct: 632 KNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHK 691

Query: 207 EEAYE------MLMNVKND-----------------------GLKPDVYTYTAVMDGFCK 237
           +E          L N+  D                       G  P++ TY+ +++G CK
Sbjct: 692 KEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCK 751

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           VGR N A  L +   E G++P+ +  N+L +  CK G   + V LL  M + + L    S
Sbjct: 752 VGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLES 811

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y  L+ GL +      A ++F  ++R G+  DE     L+ GL    +     ++   ++
Sbjct: 812 YKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGY-----VDQCSEL 866

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKG 383
              M K      P TY ++++ L + 
Sbjct: 867 LNLMEKNGCRLHPETYSMLMQELNRA 892



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 138/328 (42%), Gaps = 46/328 (14%)

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           N   PN+ T   ++NS CK G +  A     ++ R    P++ TY  L+ G C    VE 
Sbjct: 183 NSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVER 242

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +   +     + +  +YT ++ G C+ G+ +EA+E      E G  P V T+  L  
Sbjct: 243 ACGVFCVMP----RRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVC 298

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
             C+ G  ++ + L   M++R C P+  +Y+ L++ L K G++  A+ +  EMV  G   
Sbjct: 299 ALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAP 358

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM-TKKVSVTDPGTYGIVIRTLGKGKKTD 387
                N+L+   C     ++ ++EDA  V   M +KKV                      
Sbjct: 359 SVVPFNALIGSYC-----KRGMMEDAVGVLGLMESKKVC--------------------- 392

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                          P   T+N +I   C    +D+A+ LL  M E    P   +Y+ LI
Sbjct: 393 ---------------PNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLI 437

Query: 448 TKLDQLEKSYDACALYGAALKQGVIPQR 475
             L ++     A  L+   ++ G  P +
Sbjct: 438 HGLCEVGVVDSASRLFRLMIRDGFSPDQ 465



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 9/186 (4%)

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P+ I+ +T+LN   K G +  A   F  ++R     D     SL+ G C       D +
Sbjct: 186 FPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYC-----RNDDV 240

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           E A  VF  M ++ +V+    Y  +I  L +  K  EAL       E G  P   T+  +
Sbjct: 241 ERACGVFCVMPRRNAVS----YTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVL 296

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           + ALC  G+  +AL L   M E    P+  +Y +LI  L +  +  +A  +    +++GV
Sbjct: 297 VCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGV 356

Query: 472 IPQRKP 477
            P   P
Sbjct: 357 APSVVP 362


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 205/410 (50%), Gaps = 16/410 (3%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ ID+F  + +     SV DF  L+  +V +   +  +    +     +  N+++F+I
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++C+C+ +    A      +   G+HP V TF+ L++ LC   R+ EAL++  QM    
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM---- 174

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CKPN+ T+  L+ GLC  GRV EA  +L  +  DGL+P+  TY  ++DG CK+G +  A+
Sbjct: 175 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 246 ELLNEAIE-RGVTPNVVTF-----NTLFNGYCKEGTPMKGVGLLK-LMKKRNCLPDKISY 298
            LL +  E   + PNVV +       + NG+C  G   +   LL+ +++++   PD ++Y
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + L+N  +K GK   A  ++ EM+  G        +S++ G C     +++ L+ A  +F
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFC-----KQNRLDAAEHMF 349

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
             M  K    D  T+  +I    + K+ D+ +  LH   E G +  TIT+  +I   C  
Sbjct: 350 YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQV 409

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           G ++ A  LL  M      P+  + + L+  L    K  DA  ++ A  K
Sbjct: 410 GDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK 459



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 214/465 (46%), Gaps = 68/465 (14%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L   +  F  I K G + +V  F+ LL  L + +    A+  F +       PN  TF
Sbjct: 127 SKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTF 182

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + ++   C +    EA  ++D M ++G  PN  T+  +V+ +CK G    AL +L +M  
Sbjct: 183 TTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 242

Query: 184 IG-CKPNIQTY-----NCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFC 236
           +   KPN+  +      C++ G C  GR  EA ++L   ++   + PDV TY A+++ F 
Sbjct: 243 VSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFV 302

Query: 237 KVGRSNEAMELLNEAIERGV-----------------------------------TPNVV 261
           K G+  EA EL +E + RG+                                   +P+++
Sbjct: 303 KEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDII 362

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           TFNTL  GYC+      G+ LL  M +   + + I+Y+TL++G  + G +  A  + +EM
Sbjct: 363 TFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEM 422

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK---VSVTDP-------- 370
           V  G   +    N+LL GLC     +   L+DA ++F+ M K    +  + P        
Sbjct: 423 VSSGVCPNVVTCNTLLDGLC-----DNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDV 477

Query: 371 GTYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            TY I+I  L   GK  + +E    + H    G +P TIT+N+VI  LC + ++D+A  +
Sbjct: 478 QTYNILISGLINEGKFLEAEELYEEMPHR---GIVPDTITYNSVIHGLCKQSRLDEATQM 534

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
              M   +  P+  ++  LI    +  +  D   L+    ++G++
Sbjct: 535 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 579



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 171/358 (47%), Gaps = 16/358 (4%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           ++P+  T++ +I  +  +  FFEA ++ D M   G  P+  T++ +++  CK  RL  A 
Sbjct: 287 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAE 346

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            +   M   GC P+I T+N L+ G C   RV++  ++L  +   GL  +  TYT ++ GF
Sbjct: 347 HMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 406

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK------- 288
           C+VG  N A +LL E +  GV PNVVT NTL +G C  G     + + K M+K       
Sbjct: 407 CQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDA 466

Query: 289 ----RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
                   PD  +Y+ L++GL+  GK   A  +++EM   G   D    NS++ GLC +S
Sbjct: 467 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQS 526

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
                 L++A Q+F+ M  K    +  T+  +I    K  + D+ L         G +  
Sbjct: 527 R-----LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 581

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
            IT+  +I      G I+ AL +   M      P   +   ++T L   E+   A A+
Sbjct: 582 AITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAM 639



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 196/424 (46%), Gaps = 23/424 (5%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG-LAPNS--WTF- 123
           E + + D + +DG   +   +  ++  +  + +  +A+    +      + PN   W   
Sbjct: 197 EAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLE 256

Query: 124 --SIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             + MI  +C+   + EA++++  M +     P+V T+  L+N+  K G+  EA E+ D+
Sbjct: 257 RRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDE 316

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P+  TY+ ++ G C   R++ A  M   +   G  PD+ T+  ++ G+C+  R
Sbjct: 317 MLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKR 376

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++ ++LL+E  E G+  N +T+ TL +G+C+ G       LL+ M      P+ ++ +T
Sbjct: 377 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNT 436

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRF-----------GFEVDERMMNSLLRGLCMKSWEEKD 349
           LL+GL   GK++ A+ +FK M +            G E D +  N L+ GL      E  
Sbjct: 437 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGL----INEGK 492

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            LE A +++E+M  +  V D  TY  VI  L K  + DEA             P  +TF 
Sbjct: 493 FLE-AEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 551

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I   C  G++D  L L   M     + +  +Y  LI    ++     A  ++   +  
Sbjct: 552 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMAS 611

Query: 470 GVIP 473
           GV P
Sbjct: 612 GVYP 615



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 156/327 (47%), Gaps = 16/327 (4%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N  +FTIL+   C   +L  AL    ++ ++G  P + T++ LL GLC   R+ EA ++ 
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +     KP+V T+T +M+G C+ GR  EA+ LL+  +E G+ PN +T+ T+ +G CK 
Sbjct: 172 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 227

Query: 274 GTPMKGVGLLKLMKKRNCL-PDKISY-----STLLNGLLKWGKIRPAVSIFKEMV-RFGF 326
           G  +  + LL+ M++ + + P+ + +     + ++NG    G+   A  + +EM+ R   
Sbjct: 228 GDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKI 287

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             D    N+L+        +E    E A +++++M  +  +    TY  +I    K  + 
Sbjct: 288 SPDVVTYNALINAFV----KEGKFFE-AEELYDEMLPRGIIPSTITYSSMIDGFCKQNRL 342

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D A    +     G  P  ITFN +I   C   ++D  + LL  M E   + +  +Y  L
Sbjct: 343 DAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 402

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I    Q+     A  L    +  GV P
Sbjct: 403 IHGFCQVGDLNAAQDLLQEMVSSGVCP 429



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 151/330 (45%), Gaps = 48/330 (14%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D   K + L     +F  +   G +  +  FN L+         +  +K 
Sbjct: 324 PSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKL 383

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E +  GL  N+ T++ +I  +C   D   A+ ++  M  +G  PNV T   L++ LC 
Sbjct: 384 LHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCD 443

Query: 168 SGRLKEALEVLDQMGRI-----------GCKPNIQTYNCLLKGL---------------- 200
           +G+LK+ALE+   M +            G +P++QTYN L+ GL                
Sbjct: 444 NGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 503

Query: 201 -------------------CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                              C   R++EA +M  ++ +    P+V T+T +++G+CK GR 
Sbjct: 504 PHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 563

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++ +EL  E   RG+  N +T+ TL +G+ K G     + + + M      PD I+   +
Sbjct: 564 DDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNM 623

Query: 302 LNGLLKWGKIRPAVSIFKEM-VRFGFEVDE 330
           L GL    +++ AV++ +++ +  G+++++
Sbjct: 624 LTGLWSKEELKRAVAMLEDLQMSVGYQLED 653



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 155/324 (47%), Gaps = 10/324 (3%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLD--QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           P+V  F  L+  + + GRL   + +    +M R+ C  N  ++  L+K  C   ++  A 
Sbjct: 76  PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC--NAYSFTILMKCFCSCSKLPFAL 133

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
                +   G  P V T++ ++ G C   R +EA++L ++  +    PNVVTF TL NG 
Sbjct: 134 STFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGL 189

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+EG  ++ V LL  M +    P++I+Y T+++G+ K G    A+++ ++M         
Sbjct: 190 CREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPN 249

Query: 331 RMMNSLLRGLCM-KSWEEKDLLEDAYQVFEKMTKKVSVT-DPGTYGIVIRTLGKGKKTDE 388
            ++  L R  CM   +       +A Q+ ++M ++  ++ D  TY  +I    K  K  E
Sbjct: 250 VVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFE 309

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A       +  G IP TIT++++I   C + ++D A  + +LM      P   +++ LI 
Sbjct: 310 AEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIA 369

Query: 449 KLDQLEKSYDACALYGAALKQGVI 472
              + ++  D   L     + G++
Sbjct: 370 GYCRAKRVDDGIKLLHEMTEAGLV 393



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 16/285 (5%)

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L  G   +  +E+A ++  ++      P V  +  +M    ++GR +  + L  +   R 
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           V  N  +F  L   +C        +     + K    P  +++STLL+GL    +I  A+
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +F +M +        +MN L R        E  ++E A  + ++M +     +  TYG 
Sbjct: 169 DLFHQMCKPNVVTFTTLMNGLCR--------EGRVVE-AVALLDRMLEDGLQPNQITYGT 219

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITF-----NNVIQALCGEGKIDKALLLLF 429
           ++  + K   T  AL  L    E+ HI P  + +       +I   C  G+  +A  LL 
Sbjct: 220 IVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQ 279

Query: 430 LMYEHAKI-PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M E  KI P   +Y+ LI    +  K ++A  LY   L +G+IP
Sbjct: 280 EMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 324


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 201/404 (49%), Gaps = 16/404 (3%)

Query: 36  SLSTAESLDL-------KENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSD 87
           SL   E+LDL       +  P  +   + ++ I K       I++ D ++  G +  +  
Sbjct: 50  SLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            N L+      ++   A  F  +    G  P+  TF+ +I  +C  N   EA  +++ M 
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  P+V  +T +++SLCK+G +  AL + DQM   G +P++  Y  L+ GLC  GR  
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +L  +    +KPDV T+ A++D F K G+  +A EL NE I   + PN+ T+ +L 
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG+C EG   +   +  LM+ + C PD ++Y++L+NG  K  K+  A+ IF EM + G  
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +     +L++G     + +      A +VF  M  +    +  TY +++  L    K  
Sbjct: 350 GNTITYTTLIQG-----FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404

Query: 388 EALIHLH--HAIEM-GHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +AL+        EM G  P   T+N ++  LC  GK++KAL++ 
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 215/432 (49%), Gaps = 13/432 (3%)

Query: 33  AAASLSTAESLDLKENPRSLQAQRFVDR--IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           +  +LS +  LDL    R+    R + R  + +    E +D+F  + +     S+ DF  
Sbjct: 18  SGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTK 77

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           LL  +  + + +  +         G++ + +T ++++ C+C  +  + A   +  M   G
Sbjct: 78  LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + P++ TFT L+N  C   R++EA+ +++QM  +G KP++  Y  ++  LC  G V  A 
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   ++N G++PDV  YT++++G C  GR  +A  LL    +R + P+V+TFN L + +
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
            KEG  +    L   M + +  P+  +Y++L+NG    G +  A  +F  M   G   D 
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               SL+ G C     +   ++DA ++F +M++K    +  TY  +I+  G+  K + A 
Sbjct: 318 VAYTSLINGFC-----KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH---AKIPSRTSYDMLI 447
               H +  G  P   T+N ++  LC  GK+ KAL++   M +       P+  +Y++L+
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432

Query: 448 TKL---DQLEKS 456
             L    +LEK+
Sbjct: 433 HGLCYNGKLEKA 444



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 146/280 (52%), Gaps = 8/280 (2%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  FN L+ A V   +   A + ++E     +APN +T++ +I  +C +    EAR++  
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G  P+V  +T L+N  CK  ++ +A+++  +M + G   N  TY  L++G   VG
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER---GVTPNVV 261
           +   A E+  ++ + G+ P++ TY  ++   C  G+  +A+ +  +  +R   GV PN+ 
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+N L +G C  G   K + + + M+KR      I+Y+ ++ G+ K GK++ AV++F  +
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
              G + +     +++ GL       + L  +A+ +F KM
Sbjct: 487 PSKGVKPNVVTYTTMISGLF-----REGLKHEAHVLFRKM 521



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 118/224 (52%), Gaps = 3/224 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   +F  ++  G    V  +  L+       + + A+K F E S  GL  N+ T++ +I
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI--- 184
           + +        A++V   M   G  PN+ T+ +L++ LC +G++K+AL + + M +    
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  PNI TYN LL GLCY G++E+A  +  +++   +   + TYT ++ G CK G+   A
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           + L      +GV PNVVT+ T+ +G  +EG   +   L + MK+
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 208/448 (46%), Gaps = 47/448 (10%)

Query: 52  LQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA 111
           L+ Q     IK   L + ID+F  + +      V DF  LL  +V +   +  +    + 
Sbjct: 45  LKLQSGFHEIKG--LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKM 102

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
               +  N ++F+I+I+C+C+ +    A      +   G+HP++ TF+ L++ LC   R+
Sbjct: 103 EMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRV 162

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
            EAL    Q+    CKPN+  +  L+ GLC  GRV EA  +L  +  DGL+P+  TY  +
Sbjct: 163 SEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 218

Query: 232 MDGFCKV------------------------------------GRSNEAMELLNEAIERG 255
           +DG CK+                                    GR  +A  L +E  E+G
Sbjct: 219 VDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKG 278

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           ++PN+ T+N + NG+C  G   +   LL+ M +R   PD +++S L+N L+K GK   A 
Sbjct: 279 ISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAE 338

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            ++ EM+  G   +    NS++ G     + +++ L+ A ++F  M  K    D  T+ I
Sbjct: 339 ELYNEMLPRGIIPNTITYNSMIDG-----FSKQNRLDAAERMFYLMATKGCSPDVITFSI 393

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I      K+ D+ +  LH     G +  TIT+  +I   C  G ++ AL LL  M    
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALY 463
             P+  + + L+  L    K  DA  ++
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMF 481



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 190/384 (49%), Gaps = 16/384 (4%)

Query: 101 QETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           Q  A   FSE    G++PN +T++ MI  +C+   + EA++++  MF+    P+V TF++
Sbjct: 264 QTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSV 323

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+N+L K G+  EA E+ ++M   G  PN  TYN ++ G     R++ A  M   +   G
Sbjct: 324 LINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKG 383

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
             PDV T++ ++DG+C   R ++ M+LL+E   RG+  N +T+ TL +G+C+ G     +
Sbjct: 384 CSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAAL 443

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE---------- 330
            LL+ M      P+ ++ +TLL+GL   GK++ A+ +FK M +   ++D           
Sbjct: 444 DLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPD 503

Query: 331 -RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
            +  N L+ GL       +    +A +++E+M  +  V D  TY  VI  L K  + DEA
Sbjct: 504 VQTYNILICGLI-----NEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEA 558

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
                     G  P  +TF  +I   C  G++   L +   M     + +  +Y  LI  
Sbjct: 559 TQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHG 618

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
             Q+     A  ++   +  GV P
Sbjct: 619 FCQVGNINGALDIFQEMISSGVYP 642



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 159/314 (50%), Gaps = 16/314 (5%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D   K + L     +F  +   G +  V  F+ L+         +  +K 
Sbjct: 351 PNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKL 410

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E S  GL  N+ T++ +I  +C   +   A  ++  M  +G  PNV T   L++ LC 
Sbjct: 411 LHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCN 470

Query: 168 SGRLKEALEVLDQMGRI-----------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           +G+LK+ALE+   M +              +P++QTYN L+ GL   G+  EA E+   +
Sbjct: 471 NGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEM 530

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            + GL PD  TY +V+DG CK  R +EA ++ +    +G +P+VVTF TL NGYCK G  
Sbjct: 531 PHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRV 590

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
             G+ +   M +R  + + I+Y TL++G  + G I  A+ IF+EM+  G   D   + ++
Sbjct: 591 GDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNM 650

Query: 337 LRGLCMKSWEEKDL 350
           L GL    W +++L
Sbjct: 651 LTGL----WSKEEL 660



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 126/264 (47%), Gaps = 11/264 (4%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + + + +   + + G   +   +  L+     L     A+    E  S G+ PN  T
Sbjct: 401 AKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVT 460

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFD-----------NGYHPNVTTFTILVNSLCKSGRL 171
            + ++   CN     +A ++   M             N   P+V T+ IL+  L   G+ 
Sbjct: 461 CNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKF 520

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
            EA E+ ++M   G  P+  TYN ++ GLC   R++EA +M  ++ + G  PDV T+T +
Sbjct: 521 SEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTL 580

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           ++G+CKVGR  + +E+  E   RG+  N +T+ TL +G+C+ G     + + + M     
Sbjct: 581 INGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGV 640

Query: 292 LPDKISYSTLLNGLLKWGKIRPAV 315
            PD I+   +L GL    +++ AV
Sbjct: 641 YPDTITIRNMLTGLWSKEELKRAV 664



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 10/241 (4%)

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           GF ++   ++A++L    +     P V+ F  L     +   P   + L + M+ R    
Sbjct: 50  GFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPC 109

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           +  S++ L+       K+  A+S F ++ + GF       ++LL GLC+     +D + +
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCV-----EDRVSE 164

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A   F ++ K   +     +  ++  L +  +  EA+  L   +E G  P  IT+  ++ 
Sbjct: 165 ALHFFHQICKPNVI----AFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 220

Query: 414 ALCGEGKIDKALLLLFLMYEHAKI-PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            +C  G    AL LL  M E ++I P+   Y  +I  L +  +  DA  L+    ++G+ 
Sbjct: 221 GMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGIS 280

Query: 473 P 473
           P
Sbjct: 281 P 281


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 201/400 (50%), Gaps = 53/400 (13%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL+P+  TF+ ++   C +    +A  V     + G  PNV T++ L++ L K  ++ EA
Sbjct: 503 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 562

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L++L +M  +GC+ N  TY+ ++ GL  VGR+E+A  +L  +++ G  PD  TY  ++DG
Sbjct: 563 LQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDG 622

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           F K  R  EA+ LL E +E G  P+VVT+ TL +G C+ G   + V +L  M  R C P+
Sbjct: 623 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 682

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM------NSLLRGLCMKSWEEK 348
            I+YS++++GL K G++  A+  F++M R     DE +       ++L+ GLC     + 
Sbjct: 683 AITYSSIVDGLCKAGRVTEALGYFEKMAR-----DEVVAPHVIAYSALIDGLC-----KA 732

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL--------------IHLH 394
             +++AY+  E+M +   + D  T+ I+I  L    + D  L              I+ +
Sbjct: 733 GRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAY 792

Query: 395 HAI------------------EM---GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
           +A+                  EM   G    T+T   VI+ALCG  +ID+A+     + E
Sbjct: 793 NAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE 852

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +     SY+ LIT L    +S  A  L  A +  G  P
Sbjct: 853 DCR--DEISYNTLITSLVASRRSEQALELLRAMVADGGSP 890



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 191/397 (48%), Gaps = 28/397 (7%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY-GLAPNSWTFSIMIRCYCNKND 135
           + +G + +V  F+ L+  L        A + +    +  G++PN +T++ ++   C   D
Sbjct: 373 RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGD 432

Query: 136 FFEARKVIDCMFDNGYH---------------------PNVTTFTILVNSLCKSGRLKEA 174
                +  + M +  +                      P + T+  LV  L KSG +++A
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L +L+ M   G  P++ T+N +L GLC   R+ +A+ +       G +P+V TY+ ++DG
Sbjct: 493 LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 552

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
             K+ + +EA++LL + +E G   N VT++T+ +G  K G     V +L+ M+   CLPD
Sbjct: 553 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 612

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++Y+TL++G  K  ++R AV + +EM+  GF        +L  GLC          ++A
Sbjct: 613 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR-----FDEA 667

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH-AIEMGHIPRTITFNNVIQ 413
            ++ + M  +    +  TY  ++  L K  +  EAL +    A +    P  I ++ +I 
Sbjct: 668 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALID 727

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            LC  G+ID+A   L  M    +IP   ++ +LI  L
Sbjct: 728 GLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGL 764



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 198/420 (47%), Gaps = 51/420 (12%)

Query: 71  DIFDSIKKD---GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           D F + +K    G   +V  ++ ++  L   NE +   K   E +  G APN+ T++ ++
Sbjct: 19  DAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLV 78

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                +    EA  +++ M  NG  P + TF +++  LCK G ++ A  V+D+M   G  
Sbjct: 79  NALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFV 138

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA--- 244
           P+++ +  LL  LC +GRV+EA+     V   G  PD  TY  ++DG  K GR   A   
Sbjct: 139 PDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMV 198

Query: 245 MELLNEAI--------------------------------ERGVTPNVVTFNTLFNGYCK 272
           ++LL E+                                 + GV+PN VT++ L +G CK
Sbjct: 199 LQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCK 258

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     +GLL   + +N      ++S+LL+GL +  ++  A+ + K M      V    
Sbjct: 259 AGKLDIALGLL---RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVV---C 312

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            NSL+ GLC     +   +++A+++F+ M +     D  TY I+++ L K ++  EA  H
Sbjct: 313 FNSLMNGLC-----QARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRH 367

Query: 393 LHHAIEM-GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI-PSRTSYDMLITKL 450
           +       G  P  +TF+ +IQ LC  G++++A  +   M     I P+R +Y  L+  L
Sbjct: 368 VELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGL 427



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 180/372 (48%), Gaps = 11/372 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L        A   F +A  +G  P   T+S +I   C  N+  +  K+++ M 
Sbjct: 4   YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PN  T+  LVN+L   GR KEA  +L++M   GC P + T+  ++KGLC  G +E
Sbjct: 64  GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A+ ++  + + G  PDV  +T ++   C++GR +EA     + +  G TP+ VT+NT+ 
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G  K G       +L+L+ +    P   +++  ++GL K G +  A   F  M + G  
Sbjct: 184 DGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVS 243

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +    ++L+ GLC     +   L+ A  +      +  +     +  ++  L +  + +
Sbjct: 244 PNTVTYDALIDGLC-----KAGKLDIALGLLRDKNSQAGMF---AFSSLLHGLCQAHRLE 295

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA I L  A  M  +P  + FN+++  LC   ++D+A  L  +M E        +Y++L+
Sbjct: 296 EA-IQLLKA--MPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILL 352

Query: 448 TKLDQLEKSYDA 459
             L +L +  +A
Sbjct: 353 KGLCKLRRIPEA 364



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 183/424 (43%), Gaps = 42/424 (9%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            +K   +++ + +   ++  G       +N L+           AV    E    G  P+ 
Sbjct: 589  LKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSV 648

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             T++ +    C    F EA +++D M   G  PN  T++ +V+ LCK+GR+ EAL   ++
Sbjct: 649  VTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK 708

Query: 181  MGRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M R     P++  Y+ L+ GLC  GR++EAYE L  +   G  PDV T++ +++G C  G
Sbjct: 709  MARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 768

Query: 240  RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR---------- 289
            R +  +EL     ERG   ++  +N + N YC +G       LL+ MK            
Sbjct: 769  RIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHG 828

Query: 290  -------------------NCLP----DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
                               + +P    D+ISY+TL+  L+   +   A+ + + MV  G 
Sbjct: 829  IVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGG 888

Query: 327  EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
              D     +++ GL      E      A ++ ++M  +    D  TY I+I  L K K+ 
Sbjct: 889  SPDACNYMTVMDGLFKAGSPEV-----AAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQL 943

Query: 387  DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
              A  +    +     P  I ++++I A C   K+D A  LL         P+ T Y  +
Sbjct: 944  PLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTITMYSTM 1000

Query: 447  ITKL 450
            +  L
Sbjct: 1001 VDSL 1004



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 198/464 (42%), Gaps = 63/464 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++    + D +   G    V     LL AL  L   + A  FF +    G  P++ 
Sbjct: 118 KEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAV 177

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ M+           A  V+  + ++   P V TFTI V+ L K+G L  A E  D M
Sbjct: 178 TYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSM 237

Query: 182 GRIGCKPNIQTYNCLLKGLCYVG--------------------------------RVEEA 209
            + G  PN  TY+ L+ GLC  G                                R+EEA
Sbjct: 238 PQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEA 297

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            ++L   K     P+V  + ++M+G C+  R +EA EL +   E G + +V+T+N L  G
Sbjct: 298 IQLL---KAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKG 354

Query: 270 YCKEGTPMKGVGLLKLMKK-RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-GFE 327
            CK     +    ++LM++   C P+ +++STL+ GL   G++  A  +++ MV   G  
Sbjct: 355 LCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGIS 414

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK-------------------VSVT 368
            +      LL GLC K+ + + L     Q FE+M ++                   V V 
Sbjct: 415 PNRFTYAFLLEGLC-KAGDSRRL----EQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVC 469

Query: 369 DPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
            P   TY  ++  L K     +AL  L   IE G  P  ITFN+V+  LC E +I  A  
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 529

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +     E    P+  +Y  LI  L ++ K  +A  L    ++ G
Sbjct: 530 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG 573



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 179/401 (44%), Gaps = 42/401 (10%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNS 120
            ++    E ++I D +   G   +   ++ ++  L        A+ +F + A    +AP+ 
Sbjct: 660  RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
              +S +I   C      EA + ++ M   G  P+V TF+IL+N LC +GR+   LE+   
Sbjct: 720  IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCG 779

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC---- 236
            M   GCK +I  YN ++   C  G    AY +L  +K  G+  +  T+  V+   C    
Sbjct: 780  MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDR 839

Query: 237  -----------------------------KVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
                                            RS +A+ELL   +  G +P+   + T+ 
Sbjct: 840  IDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVM 899

Query: 268  NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            +G  K G+P     LL+ M+ R   PD  +Y+ +++GL K  ++  A   F+EM+R   +
Sbjct: 900  DGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLK 959

Query: 328  VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
             D  + +SL+   C     + D ++DA+++      + ++T    Y  ++ +L K + TD
Sbjct: 960  PDAIVYSSLIDAFC-----KADKVDDAWKLLRSSGIEPTIT---MYSTMVDSLCKNRGTD 1011

Query: 388  EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            +AL  +         P    + ++  A   EG++D+A+ L+
Sbjct: 1012 KALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLV 1052



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 132/274 (48%), Gaps = 5/274 (1%)

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
           + T+ +L+N LCK+GR+ +A     +  + G +P + TY+ ++ GLC    V++  ++L 
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +   G  P+  TY  +++     GR+ EA  LL      G  P ++TF  +  G CKEG
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
                  ++  M  R  +PD   ++ LL+ L + G++  A   F++++  GF  D    N
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           +++ GL      +   LE A  V + + +  S     T+ I +  L K      A     
Sbjct: 181 TMVDGL-----YKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFD 235

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
              + G  P T+T++ +I  LC  GK+D AL LL
Sbjct: 236 SMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLL 269



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 119/259 (45%), Gaps = 5/259 (1%)

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ GLC  GRV +A+         G +P V TY+ V+DG C+    ++  +LL E 
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             RG  PN VT+NTL N    +G   +   LL+ M    C P+ I++  ++ GL K G+I
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +  EMV  GF  D  +   LL  LC     E   +++A+  F+++       D  
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALC-----ELGRVDEAWFFFQQVLLIGFTPDAV 177

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  ++  L K  + + A + L    E    P   TF   +  L   G +  A      M
Sbjct: 178 TYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSM 237

Query: 432 YEHAKIPSRTSYDMLITKL 450
            +    P+  +YD LI  L
Sbjct: 238 PQTGVSPNTVTYDALIDGL 256



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 128/253 (50%), Gaps = 5/253 (1%)

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY  +++G CK GR  +A     +AI+ G  P VVT++T+ +G C++    KG  LL+ M
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
             R C P+ ++Y+TL+N LL  G+ + A S+ + M   G   +      +++GLC K  E
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLC-KEGE 121

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
               +E A++V ++M  +  V D   + +++  L +  + DEA       + +G  P  +
Sbjct: 122 ----IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAV 177

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           T+N ++  L   G+++ A ++L L+ E    P+  ++ + +  L +      A   + + 
Sbjct: 178 TYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSM 237

Query: 467 LKQGVIPQRKPQD 479
            + GV P     D
Sbjct: 238 PQTGVSPNTVTYD 250



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 137/315 (43%), Gaps = 46/315 (14%)

Query: 50   RSLQAQRFVDRIKASPL------KERID----IFDSIKKDGTNWSVSDFNDLLMALVMLN 99
            R ++A R  D +  S L        RID    +F  + + G    +  +N ++ A  +  
Sbjct: 744  RMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKG 803

Query: 100  EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI-----DC--------- 145
            E   A     E  ++G+A N+ T  I+I+  C  +   EA         DC         
Sbjct: 804  EFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTL 863

Query: 146  -------------------MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
                               M  +G  P+   +  +++ L K+G  + A ++L +M   G 
Sbjct: 864  ITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGH 923

Query: 187  KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
             P+++TY  ++ GL    ++  A +    +    LKPD   Y++++D FCK  + ++A +
Sbjct: 924  SPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWK 983

Query: 247  LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
            LL  +   G+ P +  ++T+ +  CK     K + +++ MK +NC P    +++L    +
Sbjct: 984  LLRSS---GIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYV 1040

Query: 307  KWGKIRPAVSIFKEM 321
              G++  AV +  ++
Sbjct: 1041 AEGRVDEAVKLVNDL 1055



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 93/201 (46%), Gaps = 11/201 (5%)

Query: 25   QFNKLVVFAAASLSTAESLDLKE-------NPRSLQAQRFVDRI-KASPLKERIDIFDSI 76
             +N L+    AS  + ++L+L         +P +      +D + KA   +    +   +
Sbjct: 859  SYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEM 918

Query: 77   KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
            +  G +  +  +  ++  L    +   A  +F E     L P++  +S +I  +C  +  
Sbjct: 919  RSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKV 978

Query: 137  FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
             +A K++     +G  P +T ++ +V+SLCK+    +ALEV+ +M    C+P I  +  L
Sbjct: 979  DDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSL 1035

Query: 197  LKGLCYVGRVEEAYEMLMNVK 217
                   GRV+EA +++ +++
Sbjct: 1036 ATAYVAEGRVDEAVKLVNDLQ 1056


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 219/426 (51%), Gaps = 6/426 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     VD + KA  L E + +   ++K G   SV  ++ L+ +    +++E ++  
Sbjct: 561 PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSL 620

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F E    G   +  T+S++I C C  +D  +A  V   M + G  P +  +  L++SL K
Sbjct: 621 FDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVK 680

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
             ++  AL++ +++      P+   YN ++ GL    RV+EA +++ ++KN  + PD++T
Sbjct: 681 DEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFT 740

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           YT+++DG  K GR  EA  +  +  E G  P+VV + +L +   K G     + + + M 
Sbjct: 741 YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           K+ C+PD ++YS+L++ L K G++  A   F+  +  G   +  + +SL+      S+ +
Sbjct: 801 KKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLI-----DSFGK 855

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           K +++ A ++FE+M ++    +  TY  ++  L K  + + A   L    ++G +P  +T
Sbjct: 856 KGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVT 915

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I  +   G +D+A      M E   +P   ++  LI  L +++K  +AC L+ +  
Sbjct: 916 YNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSME 975

Query: 468 KQGVIP 473
           ++G  P
Sbjct: 976 EEGYNP 981



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 207/398 (52%), Gaps = 5/398 (1%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K+  + + +D+F  +K++G    + ++  LL +LV   + + A++ F+E     L P+++
Sbjct: 645  KSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTF 704

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
             ++IM+      N   EA K++D M +    P++ T+T L++ L KSGRL+EA  +  +M
Sbjct: 705  VYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKM 764

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               G +P++  Y  L+  L   G++  A  +   +      PDV TY++++D   K GR 
Sbjct: 765  TEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRV 824

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             EA      +I +G TPNV  +++L + + K+G   + + L + M++R C P+ ++Y+ L
Sbjct: 825  EEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNL 884

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            L+GL K G++  A  + +EM + G   D    N L+ G+      +  ++++A   F++M
Sbjct: 885  LSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVG-----KMGMVDEAESYFKRM 939

Query: 362  TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +K  V D  T+  +I +LGK  K  EA        E G+ P  +T+N +I  L   GK+
Sbjct: 940  KEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKV 999

Query: 422  DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
             +A ++   M     +P   +  ++   L   E+ + A
Sbjct: 1000 HEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQFHA 1037



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 198/404 (49%), Gaps = 11/404 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++IF+ +K  G N S + +N +L  LV      +AV  F +   + + P++ TF I +  
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHS 296

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +        A + I  M  +G  P V TFT+L+++L KSG + EA +  + M  + C PN
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY  L+ GL   GR+EEA E+ + +K +   PD   Y  ++DG  K G ++ A  L  
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFK 416

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E  +RG+ PN+ T+N + +   K G   +   L   +K++  +PD  +Y+TL++ L K G
Sbjct: 417 EMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGG 476

Query: 310 KIRPAVSIFKEMVRFGFE-VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           ++   ++I KEMV  G E +  R  N+   G           +E A +  E  +      
Sbjct: 477 QMDKVLAIIKEMVEKGGECIISRDSNAGHEG----------TIEGADRTVEYPSLGFKSL 526

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
              TY  ++         DEA+  L    +   IP  +T+  ++  L   G++D+A+ LL
Sbjct: 527 GEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLL 586

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             M +    PS  +Y  L+    + ++  ++ +L+   +++G +
Sbjct: 587 REMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCV 630



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 197/428 (46%), Gaps = 36/428 (8%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           ++DG + +V  +  ++  L    E +  V+  +     G   +    + ++R + + N+ 
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
             A ++ + M   G +P+   +  ++  L K G    A+ V  ++G+   +P+ QT+   
Sbjct: 234 SGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIF 293

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           +      GR++ A E +  +   G+ P V+T+T ++D   K G  +EA +  N       
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC 353

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
           +PNVVT+ TL NG  K G   +   +   MK+ NC PD I+Y+TL++GL K G+   A  
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACG 413

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           +FKEM   G   + R  N ++  L     +      +A+Q+F  + ++ +V D  TY  +
Sbjct: 414 LFKEMKDRGLVPNLRTYNIMISVLGKAGRQ-----PEAWQLFHDLKEQGAVPDVFTYNTL 468

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGH---IPR----------------------------T 405
           I  LGKG + D+ L  +   +E G    I R                             
Sbjct: 469 IDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGE 528

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           IT+N ++ A    G +D+A+ LL +M +H  IP+  +Y  L+  L +  +  +A +L   
Sbjct: 529 ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE 588

Query: 466 ALKQGVIP 473
             KQG  P
Sbjct: 589 MEKQGCEP 596



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 184/386 (47%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+ A +     + AVK       +   P   T++ ++          EA  ++  M 
Sbjct: 531 YNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V T++ L+ S  K  + +E+L + D+M R GC  ++ TY+ ++  LC    V+
Sbjct: 591 KQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVD 650

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A ++   +K +G++P +  Y  ++    K  + + A+++ NE  E  + P+   +N + 
Sbjct: 651 QALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMV 710

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG  K     +   L+  MK +N LPD  +Y++LL+GL K G++  A ++F +M   G E
Sbjct: 711 NGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHE 770

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D     SL     M    +   L  A  +F  M KK  V D  TY  +I +LGK  + +
Sbjct: 771 PDVVAYTSL-----MDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVE 825

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA     ++I  G  P    ++++I +   +G +D+AL L   M      P+  +Y+ L+
Sbjct: 826 EAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLL 885

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
           + L +  +   A  L     K G +P
Sbjct: 886 SGLAKAGRLNVAEKLLEEMEKVGCVP 911



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 197/443 (44%), Gaps = 36/443 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+E  ++F  +K++  +     +N L+  L    E + A   F E    GL PN  
Sbjct: 369 KAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLR 428

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++IMI          EA ++   + + G  P+V T+  L++ L K G++ + L ++ +M
Sbjct: 429 TYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEM 488

Query: 182 GRIGCKPNIQ-------------------------------TYNCLLKGLCYVGRVEEAY 210
              G +  I                                TYN L+    + G V+EA 
Sbjct: 489 VEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAV 548

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           ++L  +K     P V TYT ++DG  K GR +EA+ LL E  ++G  P+VVT+++L   +
Sbjct: 549 KLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASF 608

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
            K     + + L   M ++ C+ D  +YS ++N L K   +  A+ +F  M   G E   
Sbjct: 609 YKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLL 668

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +LL  L      + + ++ A Q+F ++ +   V D   Y I++  L K  + DEA 
Sbjct: 669 GNYKTLLSSLV-----KDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEAC 723

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             +        +P   T+ +++  L   G++++A  +   M E    P   +Y  L+  L
Sbjct: 724 KLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVL 783

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +  K   A  ++ A  K+  +P
Sbjct: 784 GKGGKLSHALIIFRAMAKKRCVP 806



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/466 (22%), Positives = 209/466 (44%), Gaps = 40/466 (8%)

Query: 43  LDLKEN---PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVML 98
           +++KEN   P ++     +D + KA        +F  +K  G   ++  +N ++  L   
Sbjct: 381 VEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKA 440

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG-------- 150
             Q  A + F +    G  P+ +T++ +I          +   +I  M + G        
Sbjct: 441 GRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRD 500

Query: 151 ----------------YHPNV-------TTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                            +P++        T+  L+++   +G + EA+++L+ M +  C 
Sbjct: 501 SNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECI 560

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P + TY  L+ GL   GR++EA  +L  ++  G +P V TY+++M  F K  +  E++ L
Sbjct: 561 PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSL 620

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E + +G   +V T++ + N  CK     + + +   MK+    P   +Y TLL+ L+K
Sbjct: 621 FDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVK 680

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
             KI  A+ IF E+       D  + N ++ GL      + + +++A ++ + M  +  +
Sbjct: 681 DEKIDFALQIFNELQESSLVPDTFVYNIMVNGLV-----KSNRVDEACKLVDSMKNQNIL 735

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  TY  ++  LGK  + +EA        E GH P  + + +++  L   GK+  AL++
Sbjct: 736 PDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALII 795

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              M +   +P   +Y  LI  L +  +  +A   +  ++ +G  P
Sbjct: 796 FRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTP 841


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 193/388 (49%), Gaps = 5/388 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           + +F  +L  LV +    TA+    +    G+ PN  T +I+I C+C+      +  V+ 
Sbjct: 65  IIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLG 124

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY P+  T   L+  LC  G +K +L   D++   G + N  +Y  LL GLC +G
Sbjct: 125 KILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIG 184

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A ++L  +++   +PDV  Y+ ++DG CK    N+A +  +E   RG+ PNV+T++
Sbjct: 185 ETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYS 244

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL  G+C  G  M    LL  M  +N  P+  +Y+ L++ L K GK++ A  +  EM   
Sbjct: 245 TLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHK 304

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D    NS+L GLC KS      L+ A  +F KM K     +  TY  +I  L KG 
Sbjct: 305 GQPADVVTYNSVLDGLC-KSQN----LDKATALFMKMKKWGIQPNKYTYTALIDGLCKGG 359

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           +   A     H +  G      T+N +I  LC EG  DKAL +   M ++  IP+  ++D
Sbjct: 360 RLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFD 419

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVI 472
           ++I  L + +++  A  L    + +G++
Sbjct: 420 IIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 164/329 (49%), Gaps = 5/329 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +   I K G        N L+  L +  E + ++ F  +  + G   N  ++  ++   C
Sbjct: 122 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLC 181

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +   A K++  + D    P+V  ++ +++ LCK   + +A +   +M   G  PN+ 
Sbjct: 182 KIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVI 241

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY+ L+ G C  G++  A+ +L  +    + P+VYTY  ++D  CK G+  EA +LL E 
Sbjct: 242 TYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEM 301

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             +G   +VVT+N++ +G CK     K   L   MKK    P+K +Y+ L++GL K G++
Sbjct: 302 HHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRL 361

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           + A  +F+ ++  G  +D R  N ++ GLC     ++ + + A  +  KM     + +  
Sbjct: 362 KNAQKLFQHLLVKGCCIDVRTYNVMISGLC-----KEGMFDKALAMKSKMEDNGCIPNAV 416

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           T+ I+IR+L +  + D+A   LH  I  G
Sbjct: 417 TFDIIIRSLFEKDENDKAEKLLHGMIAKG 445



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 152/323 (47%), Gaps = 11/323 (3%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + P +  F  ++  L K      A+ +  QM   G +PN+ T N L+   C++G++  ++
Sbjct: 61  HTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSF 120

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L  +   G +PD  T   +M G C  G    ++   ++ + +G   N V++ TL NG 
Sbjct: 121 SVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGL 180

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G     V LL++++ R+  PD + YST+++GL K   +  A   F EM   G   + 
Sbjct: 181 CKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNV 240

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA- 389
              ++L+ G C+        L  A+ +  +M  K    +  TY I+I  L K  K  EA 
Sbjct: 241 ITYSTLIWGFCLAGQ-----LMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAK 295

Query: 390 --LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             L  +HH    G     +T+N+V+  LC    +DKA  L   M +    P++ +Y  LI
Sbjct: 296 KLLAEMHHK---GQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALI 352

Query: 448 TKLDQLEKSYDACALYGAALKQG 470
             L +  +  +A  L+   L +G
Sbjct: 353 DGLCKGGRLKNAQKLFQHLLVKG 375



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 1/225 (0%)

Query: 44  DLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQE 102
           D    P  +     +D + K   + +  D F  +   G   +V  ++ L+    +  +  
Sbjct: 198 DRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLM 257

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
            A    +E     + PN +T++I+I   C +    EA+K++  M   G   +V T+  ++
Sbjct: 258 GAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVL 317

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
           + LCKS  L +A  +  +M + G +PN  TY  L+ GLC  GR++ A ++  ++   G  
Sbjct: 318 DGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCC 377

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            DV TY  ++ G CK G  ++A+ + ++  + G  PN VTF+ + 
Sbjct: 378 IDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIII 422



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 5/288 (1%)

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P I  +  +L  L  +     A  +   ++  G++P++ T   +++ FC +G+   +  +
Sbjct: 63  PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L + ++ G  P+ +T NTL  G C +G   + +     +  +    +++SY TLLNGL K
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G+ R AV + + +       D  M ++++ GLC     +  ++  AY  F +M  +   
Sbjct: 183 IGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLC-----KDKIVNQAYDFFSEMNARGIF 237

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            +  TY  +I       +   A   L+  I     P   T+N +I ALC EGK+ +A  L
Sbjct: 238 PNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKL 297

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           L  M+   +     +Y+ ++  L + +    A AL+    K G+ P +
Sbjct: 298 LAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNK 345


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 193/383 (50%), Gaps = 6/383 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   ++  + +D    ++  +N ++     +   E A ++ S     GL P+ +T++ +I
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLI 260

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             YC + D   A KV   M   G   N   +T L++ LC   R+ EA+++  +M    C 
Sbjct: 261 MGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCY 320

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P ++TY  L+K LC   R  EA  ++  ++  G+KP+++TYT ++D  C   +  +A EL
Sbjct: 321 PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAREL 380

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L + +E+G+ PNV+T+N L NGYCK G     + +++LM+ RN  P+  +Y+ L+ G  K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK 440

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
              +  A+ +  +M+      D    NSL+ G C          + AY++   M  +  V
Sbjct: 441 RN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN-----FDSAYRLLSLMNDRGLV 494

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            DP TY  +I +L K K+ +EA        +   IP  + +  +I   C  GK+++A L+
Sbjct: 495 PDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLM 554

Query: 428 LFLMYEHAKIPSRTSYDMLITKL 450
           L  M     +P+  +++ LI  L
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGL 577



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 186/363 (51%), Gaps = 6/363 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+M      + ++A K F E    G   N   ++ +I   C +    EA  +   M 
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMK 315

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D+  +P V T+T+L+ +LC S R  EAL ++ +M   G KPNI TY  L+  LC   ++E
Sbjct: 316 DDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLE 375

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A E+L  +   GL P+V TY A+++G+CK G   +A++++     R + PN  T+N L 
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELI 435

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            GYCK     K +G+L  M +R  LPD ++Y++L++G  + G    A  +   M   G  
Sbjct: 436 KGYCKRNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D     S++  LC     +   +E+A  +F+ + +K  + +   Y  +I    K  K +
Sbjct: 495 PDPWTYTSMIDSLC-----KSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVN 549

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA + L   +    +P ++TFN +I  LC +GK+ +A LL   M +    P+ ++  +LI
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILI 609

Query: 448 TKL 450
            +L
Sbjct: 610 HRL 612



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 178/386 (46%), Gaps = 41/386 (10%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N LL +L      +   + + E     + PN +T++ M+  YC   +  EA + +  + 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  P+  T+T L+   C+   L  A +V  +M   GC+ N   Y  L+ GLC   R++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA ++ + +K+D   P V TYT ++   C   R +EA+ L+ E  E+G+ PN+ T+  L 
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +  C +    K   LL  M ++  +P+ I+Y                             
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITY----------------------------- 396

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N+L+ G C     ++ ++EDA  V E M  +    +  TY  +I+   K +   
Sbjct: 397 ------NALINGYC-----KRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVH 444

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A+  L+  +E   +P  +T+N++I   C  G  D A  LL LM +   +P   +Y  +I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMI 504

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L + ++  +AC L+ +  ++ VIP
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKDVIP 530



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 188/400 (47%), Gaps = 24/400 (6%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++  ++   + + G   +V  +N L+         E A+       S  L PN+ T++ 
Sbjct: 374 LEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNE 433

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+ YC +N   +A  V++ M +    P+V T+  L++  C+SG    A  +L  M   G
Sbjct: 434 LIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY  ++  LC   RVEEA ++  +++   + P+V  YTA++DG+CK G+ NEA 
Sbjct: 493 LVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +L + + +   PN +TFN L +G C +G   +   L + M K +  P   + + L++ L
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRL 612

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
           LK G    A   F++M+  G + D     + ++  C +       L+DA  +  KM +  
Sbjct: 613 LKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGR-----LQDAEDMVAKMKENG 667

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC--------- 416
              D  TY  +I+  G   +T+ A + L    + G  P   TF ++I+ L          
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKG 727

Query: 417 GEGKI---------DKALLLLFLMYEHAKIPSRTSYDMLI 447
           GE  +         D  + LL  M EH   P+  SY+ L+
Sbjct: 728 GEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLM 767



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 178/394 (45%), Gaps = 59/394 (14%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+         ++A +  S  +  GL P+ WT++ MI   C      EA  + D
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFD 521

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +      PNV  +T L++  CK+G++ EA  +L++M    C PN  T+N L+ GLC  G
Sbjct: 522 SLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDG 581

Query: 205 RVEE-----------------------------------AYEMLMNVKNDGLKPDVYTYT 229
           +++E                                   AY     + + G KPD +TYT
Sbjct: 582 KLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYT 641

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
             +  +C+ GR  +A +++ +  E GV+P++ T+++L  GY   G       +LK M   
Sbjct: 642 TFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDT 701

Query: 290 NCLPDKISYSTLLNGLL--KWGKIR---PAVSIFKEMVRFGFEVD--ERMM--------- 333
            C P + ++ +L+  LL  K+GK++   P V +   M+ F   V+  E+M+         
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAK 761

Query: 334 --NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG-TYGIVIRTLGKGKKTDEAL 390
               L+ G+C     E   L  A +VF+ M +K  ++     +  ++    K +K +EA 
Sbjct: 762 SYEKLMLGIC-----EIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAA 816

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             +   I +GH+P+  +   +I  L  +G+ ++ 
Sbjct: 817 KVVDDMICVGHLPQLESCKILICRLYKKGEKERG 850



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 181/405 (44%), Gaps = 24/405 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  ++E  D+FDS+++     +V  +  L+       +   A     +  S    PNS 
Sbjct: 509 KSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSL 568

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C      EA  + + M      P V+T TIL++ L K G    A     QM
Sbjct: 569 TFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQM 628

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP+  TY   ++  C  GR+++A +M+  +K +G+ PD++TY++++ G+  +GR+
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRT 688

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFN-------GYCKEGTP----MKG-------VGLL 283
           N A  +L    + G  P+  TF +L         G  K G P    M         V LL
Sbjct: 689 NSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELL 748

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM-VRFGFEVDERMMNSLLRGLCM 342
           + M +    P+  SY  L+ G+ + G +R A  +F  M  + G    E + N+LL   C 
Sbjct: 749 EKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCC- 807

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
              E+ +   +A +V + M     +    +  I+I  L K  + +       + ++ G+ 
Sbjct: 808 -KLEKHN---EAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYY 863

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              + +  +I  +  +G ++    L  +M ++    S  +Y +LI
Sbjct: 864 DDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLI 908



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/286 (20%), Positives = 127/286 (44%), Gaps = 19/286 (6%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           F  +   GT      +   +         + A    ++    G++P+ +T+S +I+ Y +
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGD 684

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC--KSGRLKEA---------------- 174
                 A  V+  M D G  P+  TF  L+  L   K G++K                  
Sbjct: 685 LGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIV 744

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN-DGLKPDVYTYTAVMD 233
           +E+L++M   G  PN ++Y  L+ G+C +G +  A ++  +++  +G+ P    + A++ 
Sbjct: 745 VELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLS 804

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             CK+ + NEA +++++ I  G  P + +   L     K+G   +G  + + + +     
Sbjct: 805 CCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYD 864

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           D++++  +++G+ K G +     +F  M + G     +  + L+ G
Sbjct: 865 DELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 1/166 (0%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY-GLAPNSWTFSIMIR 128
           +++ + + + G   +   +  L++ +  +     A K F       G++P+   F+ ++ 
Sbjct: 745 VELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLS 804

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
           C C      EA KV+D M   G+ P + +  IL+  L K G  +    V   + + G   
Sbjct: 805 CCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYD 864

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           +   +  ++ G+   G VE  YE+   ++ +G      TY+ +++G
Sbjct: 865 DELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 222/449 (49%), Gaps = 40/449 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   ++E +D+F+ +       SV  +N ++  LV     + A K F    + G+ P+ +
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVY 147

Query: 122 TFSIMIRCYC-----------------------------------NKNDFFEARKVIDCM 146
           TF+I I+ +C                                    +N   EA ++ + M
Sbjct: 148 TFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDM 207

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
              G  P+V+TF  L+++LCK G ++E+  +L+++ + G   N+ T+N  ++GLC  G +
Sbjct: 208 LRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGML 267

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
             A  ML +V  +GL PDV TY  ++ G CK     EA + L++ +  G+ P+  T+NTL
Sbjct: 268 SGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTL 327

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +GYCK G       +L+    +  +PD+ +Y +L+NGL +  +I  A+++F   +  G 
Sbjct: 328 IDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGL 387

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           +    + N L++GLC     ++ L+  A Q+  +M++    +D  TY +VI  L K    
Sbjct: 388 KPTVILYNMLIKGLC-----QEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCV 442

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +A   ++ AI  G++P   TFN +I   C + K++  + +L  M+ H   P   +Y+ +
Sbjct: 443 SDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSV 502

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +  L +  K+ D    +   +++G +P +
Sbjct: 503 LNGLSKAVKNEDLMETFETMVEKGCVPNK 531



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 193/382 (50%), Gaps = 7/382 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  ++F+ + + G    VS FN LL  L    E + + +  ++    G+  N +TF+I I
Sbjct: 199 EAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFI 258

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           +  C K     A  ++D +   G  P+V T+  L+  LCK+  + EA + L ++   G +
Sbjct: 259 QGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLE 318

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TYN L+ G C +G ++ A ++L      G  PD +TY ++++G C+    + A+ L
Sbjct: 319 PDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALAL 378

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            N A+ +G+ P V+ +N L  G C+EG  ++ + ++  M +  C  D  +Y+ ++NGL K
Sbjct: 379 FNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCK 438

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-LEDAYQVFEKMTKKVS 366
            G +  A ++  + +  G+  D    N+L+ G C      K L +E   Q+  KM     
Sbjct: 439 MGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYC------KQLKMETTIQILNKMWSHGV 492

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY  V+  L K  K ++ +      +E G +P  IT+N + ++LC  GK+++AL 
Sbjct: 493 TPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALD 552

Query: 427 LLFLMYEHAKIPSRTSYDMLIT 448
           L+  +      P   S+  +I+
Sbjct: 553 LVDEILNKGITPDTVSFATIIS 574



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 210/445 (47%), Gaps = 41/445 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   + + DS+ ++G    V  +N L+  L   +    A K+  +  + GL P+ +T++ 
Sbjct: 267 LSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNT 326

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC       A K++      G+ P+  T+  L+N LC++  +  AL + +     G
Sbjct: 327 LIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKG 386

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KP +  YN L+KGLC  G + +A +M+  +  +G   D++TY  V++G CK+G  ++A 
Sbjct: 387 LKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDAN 446

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L+N+AI +G  P+V TFNTL +GYCK+      + +L  M      PD I+Y+++LNGL
Sbjct: 447 NLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGL 506

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLED---------- 353
            K  K    +  F+ MV  G   ++   N L   LC   K  E  DL+++          
Sbjct: 507 SKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDT 566

Query: 354 ------------------AYQVFEKMTKKVSVTDP-GTYGIVIRTLGKGKKTDEALIHLH 394
                             AYQ+F +M ++  V+    TY I+I    +  K D   +H+ 
Sbjct: 567 VSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAE--KLD---LHMG 621

Query: 395 HAI--EMGH---IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
             +  EMG     P T T+  +I   C  G  D     L  M E   IPS T++  +I  
Sbjct: 622 EKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINC 681

Query: 450 LDQLEKSYDACALYGAALKQGVIPQ 474
           L    + ++A  +    +  G++P+
Sbjct: 682 LCVQHRVHEAVDIIHFMVHNGIVPE 706



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 197/421 (46%), Gaps = 9/421 (2%)

Query: 57  FVDRIKASPLKER----IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
           F  RIK+    +R    + + +++   G   +   +  ++      N +  A + F++  
Sbjct: 149 FTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDML 208

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
             G+ P+  TF+ ++   C K +  E+ ++++ +   G   N+ TF I +  LC+ G L 
Sbjct: 209 RIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLS 268

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
            A+ +LD + R G  P++ TYN L+ GLC    V EA + L  + N GL+PD +TY  ++
Sbjct: 269 GAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLI 328

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           DG+CK+G    A ++L  AI +G  P+  T+ +L NG C+     + + L      +   
Sbjct: 329 DGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLK 388

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P  I Y+ L+ GL + G I  A+ +  EM   G   D    N ++ GLC     +   + 
Sbjct: 389 PTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC-----KMGCVS 443

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           DA  +      K  V D  T+  +I    K  K +  +  L+     G  P  IT+N+V+
Sbjct: 444 DANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVL 503

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             L    K +  +     M E   +P++ +Y++L   L +  K  +A  L    L +G+ 
Sbjct: 504 NGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGIT 563

Query: 473 P 473
           P
Sbjct: 564 P 564



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 1/237 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++  I I + +   G    V  +N +L  L    + E  ++ F      G  PN  
Sbjct: 473 KQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKI 532

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+    C      EA  ++D + + G  P+  +F  +++    +G LK A ++  +M
Sbjct: 533 TYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592

Query: 182 G-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           G +        TYN ++        +    ++ + +   G  PD YTY  ++DGFC  G 
Sbjct: 593 GEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGN 652

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           ++   + L E IE+G  P++ TF  + N  C +    + V ++  M     +P+ ++
Sbjct: 653 TDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVN 709



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 81/371 (21%), Positives = 141/371 (38%), Gaps = 73/371 (19%)

Query: 173 EALEVLDQMGR-IGCKPNIQTYNCLLKGLCYVGRVEEAYEML----MNVKNDGLKPDVYT 227
           +ALE+ +++ R  G K ++ TY C+++ L + G       +L    M++ N  L+     
Sbjct: 22  KALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEG---V 78

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN------------------- 268
           Y   M  + + G+  EA+++          P+V+++N + N                   
Sbjct: 79  YIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMK 138

Query: 269 ----------------GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
                            +C+   P   + LL  M  + C  + ++Y T++ G  +     
Sbjct: 139 NVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRV 198

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE------------------------- 347
            A  +F +M+R G   D    N LL  LC K   +                         
Sbjct: 199 EAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFI 258

Query: 348 -----KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
                K +L  A  + + + ++    D  TY  +I  L K     EA  +LH  +  G  
Sbjct: 259 QGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLE 318

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P   T+N +I   C  G +  A  +L        +P   +Y  LI  L Q ++   A AL
Sbjct: 319 PDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALAL 378

Query: 463 YGAALKQGVIP 473
           + AAL +G+ P
Sbjct: 379 FNAALGKGLKP 389


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 202/399 (50%), Gaps = 5/399 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           I +  T   V  +N ++     +N  E A +  +   + G  P+  T++IMI   CN+  
Sbjct: 128 ILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 187

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
              A KV+D +  +   P V T+TIL+ +    G + EA+++L++M   G  P++ TYN 
Sbjct: 188 LGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 247

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           +++G+C  G VE A E++ ++ + G KPDV +Y  ++  F   G+ +E  +L+ E   RG
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             PN VT++ L +  C+ G   + + +LK+M ++   PD  SY  L++ L K G++  A+
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            I   M+  G   D    N++L  LC      +     A ++F K+       +  +Y  
Sbjct: 368 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQ-----ALEIFNKLRGMGCPPNVSSYNT 422

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I  L        AL  +   I  G  P  IT+N++I  LC +G +++A+ LL  M +  
Sbjct: 423 MISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 482

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             P+  SY++++  L ++ +  DA  ++   +++G  P 
Sbjct: 483 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPN 521



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 170/346 (49%), Gaps = 5/346 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + D +  D    +V  +  L+ A ++      A+K   E  + GL P+ +T++ +IR 
Sbjct: 192 LKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 251

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C +     A ++I  +   G  P+V ++ IL+ +    G+  E  +++ +M   GC+PN
Sbjct: 252 MCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPN 311

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TY+ L+  LC  GR++EA  +L  +    L PD Y+Y  ++   CK GR + A+ +++
Sbjct: 312 KVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMD 371

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             I  G  P++V +NT+    CK G   + + +   ++   C P+  SY+T+++ L   G
Sbjct: 372 YMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCG 431

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
               A+ +   M+  G + DE   NSL+  LC        L+E+A  + + M +      
Sbjct: 432 DRSRALGMVPAMISKGVDPDEITYNSLISCLC-----RDGLVEEAIGLLDDMEQSGFRPT 486

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
             +Y IV+  L K ++ D+A+      IE G  P   T+  +I+ +
Sbjct: 487 VISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 169/325 (52%), Gaps = 5/325 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + + +   G    +  +N ++  +      E A +  +  +S G  P+  +++I
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNI 282

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++R + N+  + E  K++  MF  G  PN  T++IL++SLC+ GR+ EA+ VL  M    
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 342

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  +Y+ L+  LC  GR++ A  ++  + ++G  PD+  Y  ++   CK G +N+A+
Sbjct: 343 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 402

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+ N+    G  PNV ++NT+ +     G   + +G++  M  +   PD+I+Y++L++ L
Sbjct: 403 EIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCL 462

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G +  A+ +  +M + GF       N +L GLC     +   ++DA  +F +M +K 
Sbjct: 463 CRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC-----KVRRIDDAIGMFAEMIEKG 517

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEAL 390
              +  TY ++I  +G      EA+
Sbjct: 518 CRPNETTYILLIEGIGFAGWRTEAM 542



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 145/290 (50%), Gaps = 1/290 (0%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++  S+   G    V  +N LL A +   + +   K  +E  S G  PN  T+SI+I   
Sbjct: 263 ELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 322

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      EA  V+  M +    P+  ++  L+++LCK GRL  A+ ++D M   GC P+I
Sbjct: 323 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 382

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             YN +L  LC  G   +A E+   ++  G  P+V +Y  ++      G  + A+ ++  
Sbjct: 383 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 442

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            I +GV P+ +T+N+L +  C++G   + +GLL  M++    P  ISY+ +L GL K  +
Sbjct: 443 MISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 502

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           I  A+ +F EM+  G   +E     L+ G+    W   + +E A  +F +
Sbjct: 503 IDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGW-RTEAMELANSLFSR 551



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 170/377 (45%), Gaps = 39/377 (10%)

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVT---------------------------------- 156
           C    F E+   ++C+ + GY P+V                                   
Sbjct: 79  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVF 138

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
            +  +++  CK  R++ A +VL++M   G  P+I TYN ++  LC   ++  A ++L  +
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
             D   P V TYT +++     G  NEAM+LL E + RG+ P++ T+N +  G CKEG  
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            +   L+  +  + C PD ISY+ LL   L  GK      +  EM   G E ++   + L
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +  LC         +++A  V + M +K    D  +Y  +I  L K  + D A+  + + 
Sbjct: 319 ISSLC-----RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 373

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           I  G +P  + +N ++ ALC  G  ++AL +   +      P+ +SY+ +I+ L      
Sbjct: 374 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 433

Query: 457 YDACALYGAALKQGVIP 473
             A  +  A + +GV P
Sbjct: 434 SRALGMVPAMISKGVDP 450



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 155/313 (49%), Gaps = 6/313 (1%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+N  CK+G+  E+L  L+ +   G  P++     L+KG      +E+A   +M +    
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASR-VMEILESH 132

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
            +PDV+ Y AV+ GFCKV R   A ++LN    RG  P++VT+N +    C        +
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +L  +   NC+P  I+Y+ L+   +  G I  A+ + +EM+  G   D    N+++RG+
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     ++ ++E A ++   +T K    D  +Y I++R      K DE    +      G
Sbjct: 253 C-----KEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
             P  +T++ +I +LC  G+ID+A+ +L +M E    P   SYD LI+ L +  +   A 
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367

Query: 461 ALYGAALKQGVIP 473
            +    +  G +P
Sbjct: 368 GIMDYMISNGCLP 380


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 204/424 (48%), Gaps = 45/424 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L++ +D F+ +       +   +N ++ ALV     + A K +    + G++P+  
Sbjct: 65  RAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLH 124

Query: 122 TFSIMIRCYC-------------------------------NKNDFFEARKVIDCMFDNG 150
           T +I +R +C                                     +AR++ D M    
Sbjct: 125 THTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTH 184

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PN+  F  ++++LCK G + EA  +L ++ + G   N+ TYN  ++GLC  GR+ EA 
Sbjct: 185 VFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV 244

Query: 211 EMLMNVKNDGLK----PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            ++     DG++    PDV TY  ++ G CK     EAM  L   + +G  P+  T+NT+
Sbjct: 245 RLV-----DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 299

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +GYCK     +   LLK    +  +PD+++Y +L+NGL   G +  A+ +F E    G 
Sbjct: 300 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI 359

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + D  + NSL++GLC++      L+  A QV  +M ++    D  TY IVI  L K    
Sbjct: 360 KPDIVVYNSLVKGLCLQG-----LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +A + ++ AI  G++P   TFN +I   C   K+D AL L+  M+E+   P   +Y+ +
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 474

Query: 447 ITKL 450
           +  L
Sbjct: 475 LNGL 478



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 209/446 (46%), Gaps = 37/446 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           +A  L E + + D ++     ++V D   +N L+  L   +  + A+ +     + G  P
Sbjct: 236 EAGRLPEAVRLVDGMRA----YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLP 291

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           + +T++ +I  YC  +   EA +++      G+ P+  T+  L+N LC  G ++ ALE+ 
Sbjct: 292 DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELF 351

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           ++    G KP+I  YN L+KGLC  G +  A +++  +  +G  PD+ TY  V++G CK+
Sbjct: 352 NEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKM 411

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G  ++A  ++N+AI +G  P+V TFNTL +GYCK       + L++ M +    PD I+Y
Sbjct: 412 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITY 471

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-------- 350
           +++LNGL K GK+      F+EM+  G   +    N L+   C  +  E+          
Sbjct: 472 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 531

Query: 351 ----------------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                                 LE AY +F+K+ +K       T+  +I           
Sbjct: 532 EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 591

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A       +  GH   + T+  +I   C    +D+A + L  M +   IPS +++  +I 
Sbjct: 592 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 651

Query: 449 KLDQLEKSYDACALYGAALKQGVIPQ 474
            L    + + A  +    +K GV+P+
Sbjct: 652 SLTVNHRVFQAVGIIHIMVKIGVVPE 677



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 169/349 (48%), Gaps = 30/349 (8%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+  L    + E A++ F+EA + G+ P+   ++ +++  C +     A +V++ M 
Sbjct: 331 YCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMA 390

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G HP++ T+ I++N LCK G + +A  V++     G  P++ T+N L+ G C   +++
Sbjct: 391 EEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLD 450

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A +++  +   G+ PD  TY +V++G CK G+ NE  E   E I +G  PN +T+N L 
Sbjct: 451 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 510

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             +C+     +   ++  M +    PD +S++TL+ G  + G +  A  +F+++   G+ 
Sbjct: 511 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 570

Query: 328 VDERMMNSLL---------------------RGLCMKSWEEKDLLED---------AYQV 357
                 N+L+                     +G    S+  + L++          AY  
Sbjct: 571 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 630

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
             +M KK  +    T+G VI +L    +  +A+  +H  +++G +P  +
Sbjct: 631 LVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 141/330 (42%), Gaps = 40/330 (12%)

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
           HP    +   + +  ++GRL++A++  ++M    C P    YN ++  L      ++A++
Sbjct: 53  HP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHK 109

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG---------------- 255
           + + +   G+ PD++T+T  +  FC   R + A+ LL     RG                
Sbjct: 110 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 169

Query: 256 ---------------VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
                          V PN+  FN + +  CK G  ++   LL  + +R    +  +Y+ 
Sbjct: 170 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 229

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
            + GL + G++  AV +   M  +    D    N+L+RGLC KS       ++A     +
Sbjct: 230 WIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMP-----QEAMHYLRR 283

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +  + D  TY  +I    K     EA   L  A+  G +P  +T+ ++I  LC EG 
Sbjct: 284 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 343

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +++AL L          P    Y+ L+  L
Sbjct: 344 VERALELFNEAQAKGIKPDIVVYNSLVKGL 373



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 140/297 (47%), Gaps = 6/297 (2%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D+I K G    V  FN L+       + ++A++       YG+AP++ T++ ++   C  
Sbjct: 423 DAIMK-GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 481

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
               E  +    M   G HPN  T+ IL+ + C+S +++EA +V+ +M + G  P+  ++
Sbjct: 482 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 541

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+ G C  G +E AY +   ++  G      T+  ++  F      + A ++ +E + 
Sbjct: 542 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 601

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           +G   +  T+  L +G CK     +    L  M K+  +P   ++  ++N L    ++  
Sbjct: 602 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 661

Query: 314 AVSIFKEMVRFGF--EVDERMMNSLLRGLCMKSWEEKDLLED---AYQVFEKMTKKV 365
           AV I   MV+ G   EV + ++N+  + +       +DL++    +Y  +E + + V
Sbjct: 662 AVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHISYPTYEVLHEGV 718



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 121/283 (42%), Gaps = 10/283 (3%)

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y   ++     GR+ +A +    +      P    Y A+MD        ++A ++    +
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
             GV+P++ T       +C    P   + LL+ +  R      ++Y T++ GL   G   
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTH 171

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A  +F +M+      +    N +L  LC +     D+LE    + + + + +S+ +  T
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRG----DVLEAGLLLGKVIQRGMSI-NLFT 226

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y I IR L +  +  EA + L   +    +P  +T+N +I+ LC +    +A+  L  M 
Sbjct: 227 YNIWIRGLCEAGRLPEA-VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 285

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
               +P   +Y+ +I    ++    +A  L   A+ +G +P +
Sbjct: 286 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQ 328



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 8/239 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E  + F  +   G + +   +N L+      N+ E A K   + S  GL P++ 
Sbjct: 480 KAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAV 539

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F+ +I  +C   D   A  +   + + GY     TF  L+ +      +  A ++ D+M
Sbjct: 540 SFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEM 599

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + +  TY  L+ G C    V+ AY  L+ +   G  P + T+  V++      R 
Sbjct: 600 LSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRV 659

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +A+ +++  ++ GV P VV  +T+ N   KE    K + +  LMKK +     ISY T
Sbjct: 660 FQAVGIIHIMVKIGVVPEVV--DTILNADKKEIAAPK-ILVEDLMKKGH-----ISYPT 710


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 191/382 (50%), Gaps = 5/382 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + I  F   KK       +    LL  ++ ++    A++F+ E    G  PN +TF++
Sbjct: 178 VSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNV 237

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C +    +A+ + D +   G  P   +F  L+N  CKSG L+E   +   M    
Sbjct: 238 LMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFR 297

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ TY+ L+ GLC   ++E+A  +   + + GL P+  T+T +++G CK GR + A+
Sbjct: 298 VFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLAL 357

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+  +   +G+  ++V +NTL +G CK G   +    +  M KR  +PDK +Y+TLL+G 
Sbjct: 358 EIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGS 417

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +  A+ + KEMV+ G ++D     +++ GLC         + DA +   +M +  
Sbjct: 418 CKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGK-----IVDAERTLREMLRAG 472

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D GTY +V+    K          L      GHIP  IT+N ++  LC +G++  A 
Sbjct: 473 LKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNAD 532

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
           +LL  M     +P   +Y++L+
Sbjct: 533 MLLNAMLNLGVVPDDITYNILL 554



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 170/328 (51%), Gaps = 5/328 (1%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           + D+GY PNV TF +L+N LCK G++K+A  + D++ + G +P   ++N L+ G C  G 
Sbjct: 223 ILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGN 282

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +EE + + M ++   + PDV+TY+A++DG CK  +  +A  L  E  +RG+ PN VTF T
Sbjct: 283 LEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTT 342

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L NG CK G     + + + M  +    D + Y+TL++GL K G  R A     EM + G
Sbjct: 343 LINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRG 402

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              D+    +LL G C    +E DL E A ++ ++M K+    D   +  +I  L +  K
Sbjct: 403 LIPDKFTYTTLLDGSC----KEGDL-ELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGK 457

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             +A   L   +  G  P   T+  V+   C +G +     LL  M     IP   +Y++
Sbjct: 458 IVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNV 517

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           L+  L +  +  +A  L  A L  GV+P
Sbjct: 518 LMNGLCKQGQVKNADMLLNAMLNLGVVP 545



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 180/361 (49%), Gaps = 5/361 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK S     ++ +  I   G   +V  FN L+  L    + + A   F E    GL P +
Sbjct: 208 IKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTA 267

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +F+ +I  YC   +  E  ++   M +    P+V T++ L++ LCK  +L++A  +  +
Sbjct: 268 VSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKE 327

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  PN  T+  L+ G C  GRV+ A E+   +   GLK D+  Y  ++DG CK G 
Sbjct: 328 MCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGY 387

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA + + E  +RG+ P+  T+ TL +G CKEG     + + K M K     D ++++ 
Sbjct: 388 FREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTA 447

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++GL + GKI  A    +EM+R G + D+     ++ G C     +K  ++  +++ ++
Sbjct: 448 IISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFC-----KKGDVKMGFKLLKE 502

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M     +    TY +++  L K  +   A + L+  + +G +P  IT+N ++Q  C  GK
Sbjct: 503 MQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGK 562

Query: 421 I 421
           +
Sbjct: 563 L 563



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 123/247 (49%), Gaps = 3/247 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A++ + +  + GL  +   ++ +I   C    F EARK +  M   G  P+  T+T L
Sbjct: 354 DLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTL 413

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++  CK G L+ ALE+  +M + G + +   +  ++ GLC  G++ +A   L  +   GL
Sbjct: 414 LDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGL 473

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           KPD  TYT VMDGFCK G      +LL E    G  P V+T+N L NG CK+G       
Sbjct: 474 KPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADM 533

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           LL  M     +PD I+Y+ LL G  K GK+    ++  EM   G   D     SLL  L 
Sbjct: 534 LLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVSDYASYRSLLHELS 590

Query: 342 MKSWEEK 348
             S + +
Sbjct: 591 KASKDRQ 597



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 190/438 (43%), Gaps = 32/438 (7%)

Query: 43  LDLKENPRSLQAQRFVDRIKASPL----KERIDIFDSIKKDGT-NWSVSDFNDLLMALVM 97
           + LK    S +A  F+  +  +P     K  +  FD +    T + +V  +  ++  L+ 
Sbjct: 63  ISLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIA 122

Query: 98  --LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV 155
             +N+Q  ++  F   S  G    S  F+ ++          E +  +   F        
Sbjct: 123 HRMNQQAESLLHFV-VSRKGKGSASSVFASIL----------ETKGTLSSSF-------- 163

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
             F  L++   + G + +A++      +   K       CLL+ +  +     A E  + 
Sbjct: 164 -VFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLE 222

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           + + G  P+VYT+  +M+  CK G+  +A  + +E  + G+ P  V+FNTL NGYCK G 
Sbjct: 223 ILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGN 282

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +G  L  +M++    PD  +YS L++GL K  ++  A  +FKEM   G   ++    +
Sbjct: 283 LEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTT 342

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+ G C     +   ++ A +++++M  K    D   Y  +I  L KG    EA   +  
Sbjct: 343 LINGQC-----KNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGE 397

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
             + G IP   T+  ++   C EG ++ AL +   M +        ++  +I+ L +  K
Sbjct: 398 MTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGK 457

Query: 456 SYDACALYGAALKQGVIP 473
             DA       L+ G+ P
Sbjct: 458 IVDAERTLREMLRAGLKP 475



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 83/374 (22%), Positives = 141/374 (37%), Gaps = 57/374 (15%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           ++ + FF   SSY       TFS  ++ YC+   F  A ++           N    ++L
Sbjct: 91  KSLLSFFDFLSSYP------TFSHTVQSYCSMVHFLIAHRM-----------NQQAESLL 133

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
              + + G+   +      +   G   +   ++ L+      G V +A +     K   L
Sbjct: 134 HFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNL 193

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           K        +++   K+     A+E   E ++ G  PNV TFN L N  CKEG       
Sbjct: 194 KIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQL 253

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +   ++K    P  +S++TL+NG  K G +     +   M  F    D    ++L+ GLC
Sbjct: 254 IFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLC 313

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
            +       LEDA  +F++M  +                                   G 
Sbjct: 314 KECQ-----LEDANHLFKEMCDR-----------------------------------GL 333

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           +P  +TF  +I   C  G++D AL +   M+          Y+ LI  L +     +A  
Sbjct: 334 VPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARK 393

Query: 462 LYGAALKQGVIPQR 475
             G   K+G+IP +
Sbjct: 394 FVGEMTKRGLIPDK 407


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 200/389 (51%), Gaps = 8/389 (2%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N ++       + + A ++ +E +   +  +++T   +IR  C +     A  V+D
Sbjct: 128 VMAYNAMMAGYCGAGQVDAARRWCAERA---VERDAYTCDTLIRGLCGRGRTANALAVLD 184

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M      P+V T+TIL+ + CK    K+A+++LD+M   GC P+I TYN ++ G+C  G
Sbjct: 185 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 244

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           RV++A E L N+ + G +P+  +Y  V+ G C   R  +A EL+ E  ++G  PNVVTFN
Sbjct: 245 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 304

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +  C++G     + +L+ + K  C P+ +SY+ LL+   K  K+  A++    MV  
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D    N+LL  LC +S E    +E  +Q+ +K    V +    +Y  VI  L K  
Sbjct: 365 GCYPDIVSYNTLLTALC-RSGEVDVAVELLHQLKDKGCAPVLI----SYNTVIDGLTKAG 419

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           KT EAL  L+  +  G  P  IT++ +   LC E +I+ A+     + +    P+   Y+
Sbjct: 420 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 479

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            +I  L +  +++ A  L+   +  G +P
Sbjct: 480 AIILGLCKRRETHSAIDLFAYMIGNGCMP 508



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 186/362 (51%), Gaps = 5/362 (1%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           + L+  L        A+    E       P+  T++I++   C ++ + +A K++D M D
Sbjct: 164 DTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 223

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G  P++ T+ ++VN +C+ GR+ +A+E L  +   GC+PN  +YN +LKGLC   R E+
Sbjct: 224 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 283

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A E++  +   G  P+V T+  ++   C+ G    A+E+L +  + G +PN +++N L +
Sbjct: 284 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH 343

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
            +CK+    K +  L LM  R C PD +SY+TLL  L + G++  AV +  ++   G   
Sbjct: 344 AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 403

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                N+++ GL  K+ + K+ LE    +  +M  K    D  TY  +   L +  + ++
Sbjct: 404 VLISYNTVIDGL-TKAGKTKEALE----LLNEMVSKGLQPDIITYSTIAAGLCREDRIED 458

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A+       +MG  P T+ +N +I  LC   +   A+ L   M  +  +P+ ++Y +LI 
Sbjct: 459 AIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE 518

Query: 449 KL 450
            L
Sbjct: 519 GL 520



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 181/357 (50%), Gaps = 5/357 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D + +      V  +  LL A    +  + A+K   E    G  P+  T+++++   C
Sbjct: 182 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 241

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    +A + +  +   G  PN  ++ I++  LC + R ++A E++ +MG+ GC PN+ 
Sbjct: 242 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 301

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+N L+  LC  G VE A E+L  +   G  P+  +Y  ++  FCK  + ++AM  L+  
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 361

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           + RG  P++V++NTL    C+ G     V LL  +K + C P  ISY+T+++GL K GK 
Sbjct: 362 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 421

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           + A+ +  EMV  G + D    +++  GLC      +D +EDA + F K+       +  
Sbjct: 422 KEALELLNEMVSKGLQPDIITYSTIAAGLC-----REDRIEDAIRAFGKVQDMGIRPNTV 476

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            Y  +I  L K ++T  A+    + I  G +P   T+  +I+ L  EG I +A  LL
Sbjct: 477 LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 533



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 166/320 (51%), Gaps = 5/320 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S  K+ + + D ++  G    +  +N ++  +      + A++F     SYG  PN+ 
Sbjct: 207 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 266

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I+++  C    + +A +++  M   G  PNV TF +L++ LC+ G ++ ALEVL+Q+
Sbjct: 267 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 326

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC PN  +YN LL   C   ++++A   L  + + G  PD+ +Y  ++   C+ G  
Sbjct: 327 PKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 386

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ELL++  ++G  P ++++NT+ +G  K G   + + LL  M  +   PD I+YST+
Sbjct: 387 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 446

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
             GL +  +I  A+  F ++   G   +  + N+++ GLC +          A  +F  M
Sbjct: 447 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS-----AIDLFAYM 501

Query: 362 TKKVSVTDPGTYGIVIRTLG 381
                + +  TY I+I  L 
Sbjct: 502 IGNGCMPNESTYTILIEGLA 521



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 135/258 (52%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   + + G   +V  FN L+  L      E A++   +   YG +PNS +++ ++  +
Sbjct: 286 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAF 345

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +    +A   +D M   G +P++ ++  L+ +LC+SG +  A+E+L Q+   GC P +
Sbjct: 346 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 405

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +YN ++ GL   G+ +EA E+L  + + GL+PD+ TY+ +  G C+  R  +A+    +
Sbjct: 406 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 465

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             + G+ PN V +N +  G CK       + L   M    C+P++ +Y+ L+ GL   G 
Sbjct: 466 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 525

Query: 311 IRPAVSIFKEMVRFGFEV 328
           I+ A  +  E+   G E+
Sbjct: 526 IKEARDLLDELCSRGEEI 543



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 156/377 (41%), Gaps = 77/377 (20%)

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + SL + G L EAL ++    R    P+  T   L+K L   GR  EA  +L        
Sbjct: 74  LRSLVRRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVLA-----AC 124

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PDV  Y A+M G+C  G+ + A        ER V  +  T +TL  G C  G     + 
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDAARRW---CAERAVERDAYTCDTLIRGLCGRGRTANALA 181

Query: 282 LLKLMKKRNCLPDKISYSTLL-----------------------------------NGLL 306
           +L  M +R C+PD ++Y+ LL                                   NG+ 
Sbjct: 182 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 241

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEE------------------ 347
           + G++  A+   K +  +G E +    N +L+GLC  + WE+                  
Sbjct: 242 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 301

Query: 348 -----------KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
                      K L+E A +V E++ K     +  +Y  ++    K KK D+A+  L   
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 361

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           +  G  P  +++N ++ ALC  G++D A+ LL  + +    P   SY+ +I  L +  K+
Sbjct: 362 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 421

Query: 457 YDACALYGAALKQGVIP 473
            +A  L    + +G+ P
Sbjct: 422 KEALELLNEMVSKGLQP 438



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 107/205 (52%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ + I K G + +   +N LL A     + + A+ F     S G  P+  +++ ++  
Sbjct: 320 LEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 379

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C   +   A +++  + D G  P + ++  +++ L K+G+ KEALE+L++M   G +P+
Sbjct: 380 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 439

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           I TY+ +  GLC   R+E+A      V++ G++P+   Y A++ G CK   ++ A++L  
Sbjct: 440 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 499

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEG 274
             I  G  PN  T+  L  G   EG
Sbjct: 500 YMIGNGCMPNESTYTILIEGLAYEG 524



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 8/238 (3%)

Query: 26  FNKLVVFAAASLSTAESLDLKE-------NPRSLQAQRFVDRI-KASPLKERIDIFDSIK 77
           FN L+ F         +L++ E       +P SL     +    K   + + +   D + 
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
             G    +  +N LL AL    E + AV+   +    G AP   +++ +I          
Sbjct: 363 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 422

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA ++++ M   G  P++ T++ +   LC+  R+++A+    ++  +G +PN   YN ++
Sbjct: 423 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 482

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
            GLC       A ++   +  +G  P+  TYT +++G    G   EA +LL+E   RG
Sbjct: 483 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 183/361 (50%), Gaps = 7/361 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G   N + F+++++ +C   D  +A  +   M  N   P+  ++  ++N LCK  RL EA
Sbjct: 124 GFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEA 183

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            E+  +M    CKPN  T++ L+ G C  G VEE + +L  ++  GL+ DV+ Y+A++ G
Sbjct: 184 KELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISG 243

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           FC  G      EL NE + + VTPNVVT++ L N  CK+    +   +L  M      PD
Sbjct: 244 FCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPD 303

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++Y+ L +GL K G+   A+ +   MV+ G E +    N+++ GLC     ++  ++DA
Sbjct: 304 VVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLC-----KEGRVDDA 358

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA--LIHLHHAIEMGHIPRTITFNNVI 412
             + E M KK    D  TY  +++ L    K DEA  L++L  + E    P    FN VI
Sbjct: 359 LGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVI 418

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           Q LC + ++  A  + + M E     +  +Y++LI       K   A  L+  A+  G+ 
Sbjct: 419 QELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGIS 478

Query: 473 P 473
           P
Sbjct: 479 P 479



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 209/430 (48%), Gaps = 12/430 (2%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+     +D   K   ++E   + + ++K G    V  ++ L+       + E   + 
Sbjct: 197 PNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKEL 256

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F+E     + PN  T+S ++   C K  + EA +++D M      P+V  +T+L + L K
Sbjct: 257 FNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSK 316

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +GR  +A++VLD M + G +PN  TYN ++ GLC  GRV++A  +L  +   G KPDV T
Sbjct: 317 NGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVT 376

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAI--ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           Y+ ++ G C VG+ +EA++LLN  +  E  + P+V  FN +    CK+        +   
Sbjct: 377 YSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYT 436

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M +R    + ++Y+ L++G L  GK+  A+ ++K+ V  G   +      L+ GLC    
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLC---- 492

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDP--GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
            +  +L  A  +F K  K+ S T P    Y  ++ +L +    ++A           H P
Sbjct: 493 -KMQMLSIAKGLFNK--KRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDP 549

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             ++FN +I      G ++ A  LL  M     +P   ++ +LI +  +L +  +A +LY
Sbjct: 550 DVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLY 609

Query: 464 GAALKQGVIP 473
              +  G +P
Sbjct: 610 ERMVSCGHVP 619



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 188/383 (49%), Gaps = 7/383 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D+F  +K++        +N ++  L        A + F E       PNS TFS +I  
Sbjct: 149 MDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDG 208

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C   D  E   +++ M   G   +V  ++ L++  C  G ++   E+ ++M R    PN
Sbjct: 209 FCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPN 268

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY+CL+  LC   + +EA +ML  +    ++PDV  YT + DG  K GR+++A+++L+
Sbjct: 269 VVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLD 328

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             ++RG  PN VT+N + NG CKEG     +G+L+ M K+   PD ++YSTL+ GL   G
Sbjct: 329 LMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVG 388

Query: 310 KIRPAVSIFKEMVRFGFEV--DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
           KI  AV +   ++   F +  D    N +++ LC     ++  L  A +V+  M ++   
Sbjct: 389 KIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELC-----KQRRLRHAKRVYYTMVERGFP 443

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
           ++  TY I+I       K  +AL     A++ G  P   T+  +I  LC    +  A  L
Sbjct: 444 SNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGL 503

Query: 428 LFLMYEHAKIPSRTSYDMLITKL 450
                     P+ + Y+ L+  L
Sbjct: 504 FNKKRASGTRPTVSEYNTLMASL 526



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 192/401 (47%), Gaps = 9/401 (2%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           I K G + +V +FN LL       +   A+  F       L P+  +++ +I   C    
Sbjct: 120 IMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKR 179

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA+++   M      PN  TF+ L++  CK+G ++E   +L++M ++G + ++  Y+ 
Sbjct: 180 LVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSA 239

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G C  G +E   E+   +    + P+V TY+ +M+  CK  +  EA ++L+      
Sbjct: 240 LISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCK 299

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           V P+VV +  L +G  K G     + +L LM KR   P+ ++Y+ ++NGL K G++  A+
Sbjct: 300 VRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDAL 359

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLC--MKSWEEKDLLEDAYQVFEKMTKKVSVT-DPGT 372
            I + M + G + D    ++L++GLC   K  E  DLL         M+K+  +  D   
Sbjct: 360 GILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLL------MSKEFHIKPDVFA 413

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           + +VI+ L K ++   A    +  +E G     +T+N +I      GK+ KAL L     
Sbjct: 414 FNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAV 473

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +    P+  +Y +LI  L +++    A  L+      G  P
Sbjct: 474 DSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRP 514



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 157/337 (46%), Gaps = 8/337 (2%)

Query: 47  ENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAV 105
           E P ++     ++ + K   + + + I +++ K G    V  ++ L+  L  + + + AV
Sbjct: 335 EEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAV 394

Query: 106 KFFS--EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
              +   +  + + P+ + F+++I+  C +     A++V   M + G+  N+ T+ IL++
Sbjct: 395 DLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILID 454

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
               +G+L +ALE+       G  PN  TY  L+ GLC +  +  A  +    +  G +P
Sbjct: 455 GYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRP 514

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            V  Y  +M   C+     +A  L  E       P+VV+FN + +G  K G       LL
Sbjct: 515 TVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELL 574

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M   N +PD I++S L+N  LK G++  A S+++ MV  G   D  + +SLL+G  +K
Sbjct: 575 LEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLK 634

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
              EK        + ++M  K  V D      ++  L
Sbjct: 635 GKTEK-----VVSMLQQMADKDVVLDSKLTSTILACL 666



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 5/280 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN ++  L        A + +      G   N  T++I+I  Y +     +A ++     
Sbjct: 414 FNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAV 473

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D+G  PN  T+T+L+N LCK   L  A  + ++    G +P +  YN L+  LC    VE
Sbjct: 474 DSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVE 533

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +   ++N    PDV ++  ++DG  K G    A ELL E +   + P+ +TF+ L 
Sbjct: 534 QARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILI 593

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           N + K G   +   L + M     +PD + + +LL G    GK    VS+ ++M      
Sbjct: 594 NRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVV 653

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
           +D ++ +++L  LC  S   KD+  D  ++  K ++  SV
Sbjct: 654 LDSKLTSTILACLCNMS---KDV--DIEKILPKFSQHTSV 688



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 125/249 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+    ++ ++ + G   ++  +N L+   +   +   A++ + +A   G++PN+ 
Sbjct: 423 KQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAA 482

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I   C       A+ + +    +G  P V+ +  L+ SLC+   +++A  +  +M
Sbjct: 483 TYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEM 542

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P++ ++N ++ G    G VE A E+L+ + N  L PD  T++ +++ F K+G+ 
Sbjct: 543 RNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQL 602

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA  L    +  G  P+ V F++L  GY  +G   K V +L+ M  ++ + D    ST+
Sbjct: 603 DEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTI 662

Query: 302 LNGLLKWGK 310
           L  L    K
Sbjct: 663 LACLCNMSK 671



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 86/177 (48%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+  +  GT  +VS++N L+ +L   +  E A   F E  +    P+  +F+I+I    
Sbjct: 503 LFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTL 562

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              D   A++++  M +    P+  TF+IL+N   K G+L EA  + ++M   G  P+  
Sbjct: 563 KAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAV 622

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
            ++ LLKG    G+ E+   ML  + +  +  D    + ++   C + +  +  ++L
Sbjct: 623 LFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKIL 679



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/253 (17%), Positives = 115/253 (45%), Gaps = 3/253 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           + A  L + ++++      G + + + +  L+  L  +     A   F++  + G  P  
Sbjct: 457 LSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTV 516

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             ++ ++   C ++   +AR +   M +  + P+V +F I+++   K+G ++ A E+L +
Sbjct: 517 SEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLE 576

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M  +   P+  T++ L+     +G+++EA  +   + + G  PD   + +++ G+   G+
Sbjct: 577 MLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGK 636

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           + + + +L +  ++ V  +    +T+    C     +    +L    +   +   I  + 
Sbjct: 637 TEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSVGASIKCNE 696

Query: 301 LLNGLLKWGKIRP 313
           L   L+K  K+ P
Sbjct: 697 L---LMKLNKVHP 706


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 199/411 (48%), Gaps = 8/411 (1%)

Query: 38  STAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM 97
           ++ ES +      SL+ Q     IK   L++ ID+F  + +     SV DF  L+  +V 
Sbjct: 34  ASGESCEAGFGGESLKLQSGFHEIKG--LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVR 91

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           +   +  +  + +     +  + ++F+I+I+C+C+ +    A      +   G HP+V T
Sbjct: 92  MERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVT 151

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           FT L++ LC   R+ EAL+   QM    C+PN+ T+  L+ GLC  GR+ EA  +L  + 
Sbjct: 152 FTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE-RGVTPNVVTFNTLFNGYCKEGTP 276
            DGL+P   TY  ++DG CK G +  A+ LL +  E   + PNVV ++ + +  CK+G  
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                L   M+++   PD  +Y++++ G    G+   A  + +EM+      D    N+L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +        +E    E A +++++M  +  + +  TY  +I    K  + D A    +  
Sbjct: 332 INAF----VKEGKFFE-AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              G  P  ITFN +I   CG  +ID  + LL  M E   +   T+Y+ LI
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 181/381 (47%), Gaps = 16/381 (4%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F+E    G+ P+ +T++ MI  +C+   + +A +++  M +    P+V T+  L+N
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +  K G+  EA E+ D+M   G  PN  TY+ ++ G C   R++ A  M   +   G  P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           ++ T+  ++DG+C   R ++ MELL+E  E G+  +  T+NTL +G+   G     + LL
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-----------GFEVDERM 332
           + M      PD ++  TLL+GL   GK++ A+ +FK M +            G E D + 
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+ GL      E   LE A +++E+M  +  V D  TY  +I  L K  + DEA   
Sbjct: 514 YNILISGL----INEGKFLE-AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
                     P  +TF  +I   C  G++D  L L   M     + +  +Y  LI    +
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628

Query: 453 LEKSYDACALYGAALKQGVIP 473
           +     A  ++   +  GV P
Sbjct: 629 VGNINGALDIFQEMISSGVYP 649



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 214/491 (43%), Gaps = 87/491 (17%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L   +  F  I K G +  V  F  LL  L + +    A+ FF +       PN  TF
Sbjct: 128 SKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTF 187

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHP------------------------------ 153
           + ++   C +    EA  ++D M ++G  P                              
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247

Query: 154 ------NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                 NV  ++ +++SLCK GR  +A  +  +M   G  P++ TYN ++ G C  GR  
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV----------- 256
           +A ++L  +    + PDV TY A+++ F K G+  EA EL +E + RG+           
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367

Query: 257 ------------------------TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                                   +PN++TFNTL +GYC       G+ LL  M +   +
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLV 427

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            D  +Y+TL++G    G +  A+ + +EM+  G   D    ++LL GLC  + + KD LE
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDALE 486

Query: 353 DAYQVFEKMTKKVSVTDP--------GTYGIVIRTL---GKGKKTDEALIHLHHAIEMGH 401
             ++V +K  K +  + P         TY I+I  L   GK  + +E    + H    G 
Sbjct: 487 -MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR---GI 542

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           +P TIT++++I  LC + ++D+A  +   M   +  P+  ++  LI    +  +  D   
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 462 LYGAALKQGVI 472
           L+    ++G++
Sbjct: 603 LFCEMGRRGIV 613



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 168/335 (50%), Gaps = 17/335 (5%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D   K + L     +F  +   G + ++  FN L+         +  ++ 
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E +  GL  ++ T++ +I  +    D   A  ++  M  +G  P++ T   L++ LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 168 SGRLKEALEVLDQMGRI-----------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           +G+LK+ALE+   M +            G +P++QTYN L+ GL   G+  EA E+   +
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            + G+ PD  TY++++DG CK  R +EA ++ +    +  +PNVVTF TL NGYCK G  
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
             G+ L   M +R  + + I+Y TL+ G  K G I  A+ IF+EM+  G   D   + ++
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           L GL    W  K+ L+ A  + EK+   + ++  G
Sbjct: 658 LTGL----W-SKEELKRAVAMLEKLQMSMDLSFGG 687



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 131/304 (43%), Gaps = 41/304 (13%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           L++A+++   M R    P++  +  L+  +  + R +    +   ++   ++ D+Y++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++  FC   +   A+    +  + G+ P+VVTF TL +G C E    + +     M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C P+ ++++TL+NGL + G+I  AV++            +RMM                 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALL-----------DRMM----------------- 211

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFN 409
            ED  Q  +            TYG ++  + K   T  AL  L    E+ HI P  + ++
Sbjct: 212 -EDGLQPTQI-----------TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I +LC +G+   A  L   M E    P   +Y+ +I       +  DA  L    L++
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 470 GVIP 473
            + P
Sbjct: 320 KISP 323


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 191/388 (49%), Gaps = 5/388 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+E +++FD +KK G   S++ +N LLM        + AVK +SE    G  PN  
Sbjct: 413 QAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVV 472

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  ++R Y  K DF  A  ++D M  NG   N  T+ +L+N +C   R+ E   +L   
Sbjct: 473 TYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSF 532

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P + TYN ++ G    G +  A+ +   ++  GL P++ TYT+ +DG+C+ G S
Sbjct: 533 MSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCS 592

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+++LN+   RG+ P++V +N L NG+C+EG     + LL ++ K    P+ + Y++L
Sbjct: 593 DMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSL 652

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G      ++     ++ M++ G   D     +L+ G     + +   +  A +++ +M
Sbjct: 653 ITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDG-----FSKDGNVAFALELYSEM 707

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K  + D  T+  +   L +    D A   L     +   P    +N +I     + K+
Sbjct: 708 MAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKL 767

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITK 449
            +A  L   M      P  T+YD+L++K
Sbjct: 768 QEAFRLHDEMLNMGIQPDDTTYDILVSK 795



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 194/413 (46%), Gaps = 6/413 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K+ + +F+ +   G    V  +N+L+      ++   A+  F      G+ P+  T++ +
Sbjct: 384 KDAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSL 442

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  YC K    EA K+   M   G+ PNV T+  L+           A  +LD+M + G 
Sbjct: 443 LMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGV 502

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
             N  TYN L+ G+C V RV E   ML +  ++G  P + TY ++++GF K G    A  
Sbjct: 503 SCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFT 562

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           +  +  E+G+ PN++T+ +  +GYC+ G     + +L  +++R   PD ++Y+ L+NG  
Sbjct: 563 VYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFC 622

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           + G +  A+ +   +++ G   +  + NSL+ G     ++  +++++  + +E M K   
Sbjct: 623 QEGNMSHALQLLVILLKDGLAPNTVVYNSLITG-----YKNLNMMKEVSKFYESMIKGGI 677

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           V D  TY  +I    K      AL      +  G+IP   TF  +   LC  G ID A  
Sbjct: 678 VADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKK 737

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           LL  M      P+   Y+MLI    +  K  +A  L+   L  G+ P     D
Sbjct: 738 LLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYD 790



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 174/404 (43%), Gaps = 8/404 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D +  +   G    +    DLL+     +  + A+  F E    G   ++W F  ++   
Sbjct: 143 DTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSAC 202

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             +    +A ++ D M      P+   + + + +LCK G    AL +L +M  +G     
Sbjct: 203 LKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCD 262

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  ++  L   GR+EEA  +   +++ G K DV   T +M G+C       A+ L  E
Sbjct: 263 FTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKE 322

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            ++ G+ P  V +  L  G  + G   K   L + M  +  LP     S +L GLL   +
Sbjct: 323 TLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRR 382

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
            + AV +F+EM   G   D    N+L+   C     +   L +A  +F++M K       
Sbjct: 383 WKDAVCLFEEMADSGLP-DVFTYNNLIHWHC-----QAHKLREALNLFDRMKKAGVKPSI 436

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEM-GHIPRTITFNNVIQALCGEGKIDKALLLLF 429
            TY  ++    K    DEA + L+  + M G  P  +T+  +++    +   D A  LL 
Sbjct: 437 NTYNSLLMGYCKKGCMDEA-VKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLD 495

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M ++    +  +Y++LI  +  +++  +   +  + + +G IP
Sbjct: 496 EMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIP 539



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 105/243 (43%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA  +     ++  +++ G   ++  +   +         + A+K  ++    GL P+ 
Sbjct: 552 VKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDI 611

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             ++ +I  +C + +   A +++  +  +G  PN   +  L+        +KE  +  + 
Sbjct: 612 VAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYES 671

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + G   +  TY  L+ G    G V  A E+   +   G  PD +T+TA+  G C+ G 
Sbjct: 672 MIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGD 731

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A +LL E     V PNV  +N L NGY ++    +   L   M      PD  +Y  
Sbjct: 732 IDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDI 791

Query: 301 LLN 303
           L++
Sbjct: 792 LVS 794


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 209/427 (48%), Gaps = 5/427 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D + KA   +E + + D++       +   +  L+ +L      E A + 
Sbjct: 258 PDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEEL 317

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F   ++ G  PNS  ++ +I  +       EA  + D M + GY P+V T T++++ LCK
Sbjct: 318 FRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCK 377

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           SG  ++A +  ++M R GCKPN+ TY  +++GL  +GRV  A+ ++  +   G  PD  T
Sbjct: 378 SGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVT 437

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG-LLKLM 286
           Y  ++DGFCK+GR +EA +LL+E  +   +PN+  +++L  G C  G+    +  L +  
Sbjct: 438 YICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQS 497

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           K      D     +++ GL K G++  A  IF+ MV  G + D    N L+ GLC +S E
Sbjct: 498 KAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLC-RSRE 556

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
            +  +E A+ +   +     + D  TY  +   L K  + D A+  L  A   G     +
Sbjct: 557 NR--VERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVV 614

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
            +  +   LC +G++D+A+ L   M      P   +Y  +I  L + +K  DAC  +   
Sbjct: 615 AYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEM 674

Query: 467 LKQGVIP 473
           + +G  P
Sbjct: 675 IGKGQKP 681



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 200/427 (46%), Gaps = 8/427 (1%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R+L        +KA  +KE  ++F  ++K G       +N ++  L      + A+K   
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLD 284

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
              +    P   T+ I++   C       A ++   M  +G+ PN   +T L++   KSG
Sbjct: 285 NMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSG 344

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           R+KEA  + D+M   G +P++ T+  ++ GLC  G  E+A +    +   G KP+V TYT
Sbjct: 345 RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYT 404

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++ G  K+GR   A  ++   I  G  P+ VT+  L +G+CK G   +   LL  + K 
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKC 464

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE-VDERMMNSLLRGLCMKSWEEK 348
           +  P+   YS+L+ GL   G +   +    E  +   E +D  +  S++ GLC     + 
Sbjct: 465 SSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLC-----KT 519

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK--KTDEALIHLHHAIEMGHIPRTI 406
             L++A ++F++M  +    D  TY I+I  L + +  + + A   LH    +G++P  +
Sbjct: 520 GRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAV 579

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           T+  +   LC  G++D+A+ +L             +Y  L T L    +   A +L+   
Sbjct: 580 TYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEM 639

Query: 467 LKQGVIP 473
           ++QG  P
Sbjct: 640 VRQGGAP 646



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 182/375 (48%), Gaps = 6/375 (1%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           ++ G    V  +N L+  LV             E    G+APN+++F+I+IR +      
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG-CKPNIQTYNC 195
            +A    + M      P++ TF ILV+ LCK+G  ++A EV  +M  +G   P+   +  
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           +++ L    RV+EA E+   ++  G  PD   Y  ++DG  K G + EA+++L+  + + 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             P  VT+  L N  CK GT  +   L ++M      P+ + Y++L++G  K G+++ A 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
           S+F EMV  G+  D      ++ GLC KS       E A + FE+M +     +  TY  
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLC-KSGN----FEQAAKSFEEMMRGGCKPNVVTYTT 405

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I+ L K  +   A   +   I  G  P ++T+  ++   C  G++D+A  LL  + + +
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465

Query: 436 KIPSRTSYDMLITKL 450
             P+   Y  L+  L
Sbjct: 466 SSPNLQLYSSLVKGL 480



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 190/454 (41%), Gaps = 48/454 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  +KE   +FD + + G    V     ++  L      E A K F E    G  PN  
Sbjct: 342 KSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV 401

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+          A +++  M  +G  P+  T+  L++  CK GRL EA ++LD++
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN---VKNDGLKPDVYTYTAVMDGFCKV 238
            +    PN+Q Y+ L+KGLC  G VE   + L        + L P +    +++ G CK 
Sbjct: 462 DKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC--SIIVGLCKT 519

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK--EGTPMKGVGLLKLMKKRNCLPDKI 296
           GR +EA  +    +  G  P+  T+N L NG C+  E    +   LL  ++    LPD +
Sbjct: 520 GRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAV 579

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y+ L  GL K G++  AV + +E    G+  D     +L  GLC +   ++     A  
Sbjct: 580 TYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR-----AVS 634

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +F++M ++    D   Y  +I  L KGKK ++A       I  G  P   T+  ++QALC
Sbjct: 635 LFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALC 694

Query: 417 GEG------------------------------------KIDKALLLLFLMYEHAKIPSR 440
             G                                    K+D AL L   M     +P+ 
Sbjct: 695 HAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTA 754

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            +   L   L +  K+  A  L       G  P 
Sbjct: 755 VTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPH 788



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 188/434 (43%), Gaps = 47/434 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+   ++    F+ + + G   +V  +  ++  L  +     A +      ++G  P+S 
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC--------------- 166
           T+  ++  +C      EA +++D +      PN+  ++ LV  LC               
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQ 496

Query: 167 ---------------------KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV-- 203
                                K+GRL EA  +  +M   GCKP+  TYN L+ GLC    
Sbjct: 497 SKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            RVE A+ +L +++  G  PD  TYT +  G CK+G  + A+++L EA  RG   +VV +
Sbjct: 557 NRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAY 616

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             L  G C +G   + V L + M ++   PD  +Y  ++NGL+K  K+  A   F EM+ 
Sbjct: 617 TALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIG 676

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS-VTDPGTYGIVIRTLGK 382
            G +       +L++ LC         +++A+  FE M  +   V     Y  +I    K
Sbjct: 677 KGQKPTVATYTALVQALCHAGN-----VDEAFHRFEGMLARGELVGSVMIYDALIHGFCK 731

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
             K D AL      I  G++P  +T  ++   L   GK +KA  LL  M      P   +
Sbjct: 732 ALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAAT 791

Query: 443 YDMLITKLDQLEKS 456
           +  +   LD L KS
Sbjct: 792 FTAI---LDGLRKS 802



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 177/387 (45%), Gaps = 11/387 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP-NSWTFSIM 126
           + +  F+ +K+      +  F  L+  L      E A + F E  + G  P +    + M
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +R         EAR+V   M   G+ P+   +  +++ L K+G  +EAL+VLD M    C
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P   TY  L+  LC  G +E A E+   +   G +P+   YT+++ GF K GR  EA  
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L +E +E G  P+V+T   + +G CK G   +     + M +  C P+ ++Y+T++ GL 
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G++  A  I K M+  G   D      LL G C     +   L++A Q+ +++ K  S
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC-----KLGRLDEAAQLLDELDKCSS 466

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHH---AIEMGHIPRTITFNNVIQALCGEGKIDK 423
             +   Y  +++ L  G   +  L  L     A      P      ++I  LC  G++D+
Sbjct: 467 SPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC--SIIVGLCKTGRLDE 524

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKL 450
           A  +   M      P  T+Y++LI  L
Sbjct: 525 ACRIFQRMVSEGCKPDATTYNILINGL 551



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/462 (20%), Positives = 183/462 (39%), Gaps = 68/462 (14%)

Query: 39  TAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMAL--V 96
           TA S    +  R      FV R  A  +   ++    ++ DG++WSV +  ++L  +   
Sbjct: 26  TARSFPSGKPEREHLTPDFVRR--ADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQ 83

Query: 97  MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
           +L     AV    + +   ++   W                            G+  +V 
Sbjct: 84  VLGSHVAAVLRSLKVTGTAISFFRWAGE-----------------------QAGFQHDVF 120

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           T+  L+N L       +   + ++M + G  PN  ++N L++      R ++A      +
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT------------------- 257
           K    KPD++T+  ++D  CK G   +A E+ +E +  G                     
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240

Query: 258 -----------------PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
                            P+ + +NT+ +G  K G   + + +L  M  + C+P +++Y  
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+N L K G +  A  +F+ M   GF  +  +  SL+ G     + +   +++A  +F++
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHG-----FAKSGRMKEACSLFDE 355

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +     D  T+ ++I  L K    ++A       +  G  P  +T+  +IQ L   G+
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           +  A  ++  M  H   P   +Y  L+    +L +  +A  L
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 119/254 (46%), Gaps = 4/254 (1%)

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G + DV+TY  +M+        ++   +  E ++ G+ PN  +FN L   + +       
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           V   ++MK++ C PD  ++  L++ L K G    A  +F EM+  GF   +R +++ +  
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM-- 231

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
             +++  +   +++A +VF +M K     D   Y  +I  L K     EAL  L + +  
Sbjct: 232 --VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
             +P  +T+  ++ +LC  G +++A  L  +M      P+   Y  LI    +  +  +A
Sbjct: 290 ACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349

Query: 460 CALYGAALKQGVIP 473
           C+L+   ++ G  P
Sbjct: 350 CSLFDEMVEAGYRP 363



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 4/228 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +   + + +     G N  V  +  L   L    + + AV  F E    G AP++ 
Sbjct: 590 KIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAA 649

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  +I          +A K  D M   G  P V T+T LV +LC +G + EA    + M
Sbjct: 650 AYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGM 709

Query: 182 -GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             R     ++  Y+ L+ G C   +V+ A ++  ++ + G  P   T  ++ DG  + G+
Sbjct: 710 LARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGK 769

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           + +A ELL E    G  P+  TF  + +G  K     K   LLKL+++
Sbjct: 770 TEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGK---LLKLVQE 814


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 177/327 (54%), Gaps = 13/327 (3%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L        A     E    G  P+ +T++ +I  +C      +A +V + + 
Sbjct: 57  YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 116

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG-CKPNIQTYNCLLKGLCYVGRV 206
             G+ P+V T++ L++ LCK GRLKEA+++  +M + G C PN  TYN L+ G C +G++
Sbjct: 117 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 176

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA  +L  +   G  PDV TYT +M+GFCK+ R ++A +LLN+   +G+TPNVVTF +L
Sbjct: 177 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSL 236

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G C+E      V +L  M++++C P   +Y+T+L+G  +  ++  A     E +    
Sbjct: 237 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDCPP 296

Query: 327 EVDERMMNSLLRGLCM--KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
            V     N ++RGLC   +S E  +L+E+A        ++    D   Y  VI  L + K
Sbjct: 297 NVVS--FNIMIRGLCKVNRSSEAMELVEEA-------RRRRCNPDVVMYTTVIDVLCREK 347

Query: 385 KTDEAL-IHLHHAIEMGHIPRTITFNN 410
           K DEA  ++     E G +P +IT++ 
Sbjct: 348 KVDEACRVYRKMLEEPGCLPNSITYST 374



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 176/329 (53%), Gaps = 11/329 (3%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P + T++ +I   C      EA  +++ M  +G  P++ T+T L+   CKS +  +AL V
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFC 236
            +Q+   G +P++ TY+CL+ GLC  GR++EA ++    +K+    P+  TY +++ GFC
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           ++G+ +EAM LL    E G +P+VVT+ TL NG+CK         LL  M ++   P+ +
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           ++++L++GL +  ++  AV I  EM R          N++L G C       + LE+A +
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYC-----RVNQLEEARK 286

Query: 357 -VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            + E+M    +V    ++ I+IR L K  ++ EA+  +  A      P  + +  VI  L
Sbjct: 287 FMLEEMDCPPNVV---SFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVL 343

Query: 416 CGEGKIDKALLLLFLMYEHAK-IPSRTSY 443
           C E K+D+A  +   M E    +P+  +Y
Sbjct: 344 CREKKVDEACRVYRKMLEEPGCLPNSITY 372



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 165/323 (51%), Gaps = 9/323 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P   T+  L++ LCK+ R  EA ++L++M   GC P+I TY  L+ G C   + ++A  +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG-VTPNVVTFNTLFNGYC 271
              +   G +PDV TY+ ++DG CK GR  EA++L    I+ G   PN VT+N+L +G+C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           + G   + + LL+ M +    PD ++Y+TL+NG  K  ++  A  +  +M R G   +  
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
              SL+ GLC      ++ L DA  +  +M +K       TY  ++    +  + +EA  
Sbjct: 232 TFTSLMDGLC-----RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARK 286

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            +    EM   P  ++FN +I+ LC   +  +A+ L+         P    Y  +I  L 
Sbjct: 287 FMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLC 344

Query: 452 QLEKSYDACALYGAALKQ-GVIP 473
           + +K  +AC +Y   L++ G +P
Sbjct: 345 REKKVDEACRVYRKMLEEPGCLP 367



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 159/302 (52%), Gaps = 17/302 (5%)

Query: 182 GRIGCKPNIQ---------TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           GR GC   +Q         TYN L+ GLC   R  EAY++L  +   G  PD++TYT ++
Sbjct: 37  GRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLI 96

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNC 291
            GFCK  +S++A+ +  + + RG  P+VVT++ L +G CKEG   + + L  +++K  +C
Sbjct: 97  TGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSC 156

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
           +P+ ++Y++L++G  + GK+  A+++ + M   G   D     +L+ G C  +      L
Sbjct: 157 MPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLA-----RL 211

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           +DAY +  +MT+K    +  T+  ++  L +  +  +A+  L         P   T+N +
Sbjct: 212 DDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTI 271

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           +   C   ++++A    F++ E    P+  S++++I  L ++ +S +A  L   A ++  
Sbjct: 272 LDGYCRVNQLEEA--RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRC 329

Query: 472 IP 473
            P
Sbjct: 330 NP 331



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 133/242 (54%), Gaps = 4/242 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K   LKE ID+F  + K G+   +   +N L+     + + + A+      +  G +P+ 
Sbjct: 136 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDV 195

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ ++  +C      +A  +++ M   G  PNV TFT L++ LC+  RL +A+ +L +
Sbjct: 196 VTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGE 255

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R  C P + TYN +L G C V ++EEA + ++   +    P+V ++  ++ G CKV R
Sbjct: 256 MRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNR 313

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYS 299
           S+EAMEL+ EA  R   P+VV + T+ +  C+E    +   +  K++++  CLP+ I+YS
Sbjct: 314 SSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYS 373

Query: 300 TL 301
           T 
Sbjct: 374 TF 375


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 195/389 (50%), Gaps = 5/389 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE  D+FD++   G N  V  +N +L               F      G+AP+ +
Sbjct: 339 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 398

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+++I+ Y N     +A  + + M D+G  P+V T+  ++ +LC+ G++ +A+E  +QM
Sbjct: 399 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 458

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+   YNCL++G C  G + +A E++  + N+G+  D+  ++++++  CK+GR 
Sbjct: 459 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  + +  +  G+ P+ V +N L +GYC  G   K + +   M      P+ + Y TL
Sbjct: 519 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 578

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG  K G+I   +S+F+EM++ G +    + + ++ GL      E      A   F +M
Sbjct: 579 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF-----EAGRTVPAKMKFHEM 633

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           T+     D  TY IV+R L K +  DEA+        M      IT N +I  +    ++
Sbjct: 634 TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRV 693

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++A  L   +     +PS  +Y ++IT L
Sbjct: 694 EEAKDLFASISRSRLVPSVVTYSIMITNL 722



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 206/437 (47%), Gaps = 30/437 (6%)

Query: 60  RIKASPLK--ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET-------AVKFFSE 110
           R++   L+  E  D+ D +++ GT     D N  L AL               AV  F+ 
Sbjct: 40  RVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNR 99

Query: 111 ASSYG-----LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           A+S       L+P S T++I++ C    +    A      +   G   N+     L+   
Sbjct: 100 AASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGF 159

Query: 166 CKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LK 222
           C++ R  EAL++L  +   +GC P++ +Y+ LLK LC  G+  +A ++L  +   G    
Sbjct: 160 CEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 219

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P+V  Y  V+DGF K G  N+A +L  E ++RG+ P++VT+N++ +  CK     K    
Sbjct: 220 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 279

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L+ M  +  LP+  +Y+ L+ G    G+ + AV +FKEM R     D   ++ L+  LC 
Sbjct: 280 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLC- 338

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM--- 399
               +   +++A  VF+ M  K    D  +Y I++     G  T   L+ +    ++   
Sbjct: 339 ----KYGKIKEARDVFDTMAMKGQNPDVFSYNIML----NGYATKGCLVDMTDLFDLMLG 390

Query: 400 -GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G  P   TFN +I+A    G +DKA+++   M +H   P   +Y  +I  L ++ K  D
Sbjct: 391 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 450

Query: 459 ACALYGAALKQGVIPQR 475
           A   +   + QGV P +
Sbjct: 451 AMEKFNQMIDQGVAPDK 467



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 178/369 (48%), Gaps = 8/369 (2%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           NW+   +N+L+       + + AV+ F E   + + P+  T S+++   C      EAR 
Sbjct: 292 NWT---YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 348

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V D M   G +P+V ++ I++N     G L +  ++ D M   G  P+  T+N L+K   
Sbjct: 349 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 408

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G +++A  +   +++ G+KPDV TY  V+   C++G+ ++AME  N+ I++GV P+  
Sbjct: 409 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 468

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            +N L  G+C  G+ +K   L+  +       D + +S+++N L K G++  A +IF   
Sbjct: 469 AYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLT 528

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           V  G   D  + N L+ G C+    EK     A +VF+ M       +   YG ++    
Sbjct: 529 VNVGLHPDAVVYNMLMDGYCLVGKMEK-----ALRVFDAMVSAGIEPNVVGYGTLVNGYC 583

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K  + DE L      ++ G  P TI ++ +I  L   G+   A +    M E        
Sbjct: 584 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDIC 643

Query: 442 SYDMLITKL 450
           +Y++++  L
Sbjct: 644 TYNIVLRGL 652



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 175/391 (44%), Gaps = 5/391 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +N ++       +   A   F E    G+ P+  T++ ++   C      +A   +
Sbjct: 221 NVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFL 280

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M +    PN  T+  L+     +G+ KEA+ V  +M R    P++ T + L+  LC  
Sbjct: 281 RQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY 340

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G+++EA ++   +   G  PDV++Y  +++G+   G   +  +L +  +  G+ P+  TF
Sbjct: 341 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 400

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N L   Y   G   K + +   M+     PD ++Y T++  L + GK+  A+  F +M+ 
Sbjct: 401 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 460

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D+   N L++G C        LL+    + E M   + + D   +  +I  L K 
Sbjct: 461 QGVAPDKYAYNCLIQGFCTHG----SLLKAKELISEIMNNGMHL-DIVFFSSIINNLCKL 515

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            +  +A       + +G  P  + +N ++   C  GK++KAL +   M      P+   Y
Sbjct: 516 GRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 575

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             L+    ++ +  +  +L+   L++G+ P 
Sbjct: 576 GTLVNGYCKIGRIDEGLSLFREMLQRGIKPS 606



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 128/274 (46%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   I  +G +  +  F+ ++  L  L     A   F    + GL P++  +++++  Y
Sbjct: 488 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGY 547

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A +V D M   G  PNV  +  LVN  CK GR+ E L +  +M + G KP+ 
Sbjct: 548 CLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPST 607

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             Y+ ++ GL   GR   A      +   G+  D+ TY  V+ G  K    +EA+ L  E
Sbjct: 608 ILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 667

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
                V  N++T NT+ +G  +     +   L   + +   +P  ++YS ++  L+K G 
Sbjct: 668 LRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGL 727

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           +  A  +F  M   G E + R++N ++R L  K+
Sbjct: 728 VEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKN 761



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 114/265 (43%), Gaps = 12/265 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ + +FD++   G   +V  +  L+     +   +  +  F E    G+ P++  +SI
Sbjct: 553 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 612

Query: 126 MIRCYCNKNDFFEARKVIDC------MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           +I      +  FEA + +        M ++G   ++ T+ I++  L K+    EA+ +  
Sbjct: 613 II------DGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFK 666

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           ++  +  K NI T N ++ G+    RVEEA ++  ++    L P V TY+ ++    K G
Sbjct: 667 ELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEG 726

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
              EA ++ +     G  PN    N +     K+   ++    L  + +RN   + ++  
Sbjct: 727 LVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAM 786

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRF 324
            L++     G  R  +        F
Sbjct: 787 LLVDLFSSKGTCREQIRFLPAKYHF 811


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 205/409 (50%), Gaps = 6/409 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNS 120
           K   + E ++ F ++ K     SV DF  LL  +V +    TA+    E  SS G+ P++
Sbjct: 52  KLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDT 111

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +  +++I   C+         V+  M   G  P+V TFTIL+N LC  G +  A+E++D 
Sbjct: 112 FILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDH 171

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           + + G + +++TY  L+ GLC +G+  EA   L  ++     P+V  Y+ VMDG CK G 
Sbjct: 172 VEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGL 231

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+ L  E   +G+ PN+VT+  L  G C  G   +   LL  M K   +PD  S + 
Sbjct: 232 VSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNI 291

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++ L K GKI  A S+   M+  G   D    NSL+   C+++      +++A +VFE 
Sbjct: 292 LVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQ-----MDEATRVFEL 346

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +  + D   Y  +I    K K  ++A+  L   I++G  P  +T+  +I   C  G+
Sbjct: 347 MVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGR 406

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
              A  L   M+++ ++P+  +  +++  L + +   +A +L+ A  K 
Sbjct: 407 PLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKS 455



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 177/358 (49%), Gaps = 7/358 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +  ++ K G   SV  F  L+  L +  +   AV+        G   +  T+ ++I   C
Sbjct: 133 VLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLC 192

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA   +  M +  ++PNV  ++ +++ LCK G + EAL +  +M   G KPN+ 
Sbjct: 193 KMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLV 252

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY CL++GLC  GR +EA  +L  +   G+ PD+ +   ++D  CK G+  +A  ++   
Sbjct: 253 TYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFM 312

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I  G  P+V T+N+L + YC +    +   + +LM  R CLPD ++Y++L++G  K   I
Sbjct: 313 ILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNI 372

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ +  EM++ GF  D     +L+ G C            A ++F  M K   V +  
Sbjct: 373 NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLA-----AKELFLNMHKYGQVPNLQ 427

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI-QALCGEGKIDKALLLL 428
           T  I++  L K +   EAL  L HA+E  ++   I   ++I   +C  GK++ AL L 
Sbjct: 428 TCAIILDGLCKSQLLSEAL-SLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELF 484



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 181/347 (52%), Gaps = 5/347 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+    E S  G+ PN  T++ +I+  CN   + EA  ++D M   G  P++ +  ILV+
Sbjct: 235 ALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVD 294

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK G++ +A  V+  M  +G  P++ TYN L+   C   +++EA  +   + + G  P
Sbjct: 295 VLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLP 354

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D+  YT+++ G+CK+   N+AM LL+E I+ G TP+VVT+ TL  G+C+ G P+    L 
Sbjct: 355 DIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELF 414

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M K   +P+  + + +L+GL K   +  A+S+F  M +   +++  + + +L G+C  
Sbjct: 415 LNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMC-- 472

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                  L  A ++F  +  K    +   Y I+I    K    D+A   L +  E G +P
Sbjct: 473 ---SAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMP 529

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            + T+N  +Q L  E +I +++  L +M +       T+ +M+I  L
Sbjct: 530 DSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYL 576



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 183/377 (48%), Gaps = 6/377 (1%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVT 156
           L   + A+ FF   +     P+   F++++        +  A  ++  M  + G  P+  
Sbjct: 53  LKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTF 112

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
              +++NSLC    +     VL  M ++G +P++ T+  L+ GLC  G V  A E++ +V
Sbjct: 113 ILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHV 172

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           +  G + DV TY  +++G CK+G+++EA+  L +  ER   PNVV ++T+ +G CK+G  
Sbjct: 173 EKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLV 232

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            + +GL   M  +   P+ ++Y+ L+ GL  +G+ + A S+  EM++ G   D + +N L
Sbjct: 233 SEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNIL 292

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +  LC    +E  +++ A  V   M     V D  TY  +I       + DEA       
Sbjct: 293 VDVLC----KEGKIMQ-AKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELM 347

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           +  G +P  + + ++I   C    I+KA+ LL  M +    P   ++  LI    Q+ + 
Sbjct: 348 VSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRP 407

Query: 457 YDACALYGAALKQGVIP 473
             A  L+    K G +P
Sbjct: 408 LAAKELFLNMHKYGQVP 424



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 152/334 (45%), Gaps = 6/334 (1%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP  +     +D + K   + E + +   +   G   ++  +  L+  L      + A  
Sbjct: 213 NPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGS 272

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
              E    G+ P+  + +I++   C +    +A+ VI  M   G  P+V T+  L++  C
Sbjct: 273 LLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYC 332

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
              ++ EA  V + M   GC P+I  Y  L+ G C +  + +A  +L  +   G  PDV 
Sbjct: 333 LQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVV 392

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+T ++ GFC+VGR   A EL     + G  PN+ T   + +G CK     + + L   M
Sbjct: 393 TWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAM 452

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           +K N   + + YS +L+G+   GK+  A+ +F  +   G +++      ++ G     + 
Sbjct: 453 EKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMING-----FA 507

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           ++ LL+ A  +   M +   + D  TY + ++ L
Sbjct: 508 KQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGL 541



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 122/245 (49%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+    + N+ + A + F    S G  P+   ++ +I  +C   +  +A  ++D
Sbjct: 321 VFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLD 380

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G+ P+V T+T L+   C+ GR   A E+   M + G  PN+QT   +L GLC   
Sbjct: 381 EMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQ 440

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            + EA  +   ++   L  ++  Y+ ++DG C  G+ N A+EL +    +G+  NV  + 
Sbjct: 441 LLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYT 500

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            + NG+ K+G   K   LL  M++  C+PD  +Y+  + GL+   +I  ++     M   
Sbjct: 501 IMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDK 560

Query: 325 GFEVD 329
           GF VD
Sbjct: 561 GFSVD 565



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 162/362 (44%), Gaps = 46/362 (12%)

Query: 152 HPNVTTFTILVNSLCKSGRLK---EALEVLDQMGR------------------------- 183
           H N T F   + + CKSG+LK   EAL     M +                         
Sbjct: 34  HSNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTT 93

Query: 184 -----------IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
                      +G KP+    N ++  LC++  V   + +L  +   GL+P V T+T ++
Sbjct: 94  AISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILI 153

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           +G C  G    A+EL++   + G   +V T+  L NG CK G   + VG L+ M++RN  
Sbjct: 154 NGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWN 213

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLL 351
           P+ + YST+++GL K G +  A+ +  EM   G + +      L++GLC    W+E    
Sbjct: 214 PNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKE---- 269

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
             A  + ++M K   + D  +  I++  L K  K  +A   +   I +G +P   T+N++
Sbjct: 270 --AGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSL 327

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I   C + ++D+A  +  LM     +P   +Y  LI    +++    A  L    +K G 
Sbjct: 328 IDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGF 387

Query: 472 IP 473
            P
Sbjct: 388 TP 389



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 63/145 (43%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+  F       L  N   +SI++   C+      A ++  C+   G   NV  +TI++N
Sbjct: 445 ALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMIN 504

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
              K G L +A ++L  M   GC P+  TYN  ++GL     +  + + L  +++ G   
Sbjct: 505 GFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSV 564

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELL 248
           D  T   +++        NE  E L
Sbjct: 565 DATTTEMIINYLSTNQGDNELREFL 589


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 222/488 (45%), Gaps = 44/488 (9%)

Query: 22  KIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGT 81
           K   F +L + +A +L   ++L+            F +  K   LKE +++   ++  G 
Sbjct: 129 KFRHFMRLYIVSATALIGNKNLERANEVMQCMVMNFAENGK---LKEAVNMVVEMQNQGL 185

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
             S    N +L   V +   E A   F E    G++P+  +F +M+   CN     EA +
Sbjct: 186 VPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAER 245

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
            ++ M + G+  +  T T+++++ C+ G +   +    +M  +G  PN+  +  L+ GLC
Sbjct: 246 WLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLC 305

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-GVTPNV 260
             G +++A+E+L  +   G KP+VYT+T ++DG CK G + +A  L  + +   G  PNV
Sbjct: 306 KQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNV 365

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            T+  + NGYCKE    +   LL  M+++  +P+  +Y+TL++G  K G    A  +   
Sbjct: 366 HTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDL 425

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV----------------------- 357
           M + GF  +    N+++ GLC     +K  L++AY++                       
Sbjct: 426 MGKEGFSPNIYTYNAIIDGLC-----KKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVH 480

Query: 358 ------------FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                       F KM K     D  +Y  +I T  + K+  E+      A+ +G IP  
Sbjct: 481 CRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTK 540

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
            T+ ++I   C  G    A+ L   M  H   P   +Y  LI+ L +  K  DA  LY A
Sbjct: 541 KTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDA 600

Query: 466 ALKQGVIP 473
            + +G+ P
Sbjct: 601 MMDKGLSP 608



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 180/369 (48%), Gaps = 11/369 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNS 120
           K   +K+  ++ + + + G   +V     L+  L      E A + F +   S G  PN 
Sbjct: 306 KQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNV 365

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ MI  YC ++    A  ++  M + G  PN  T+T L++  CK G    A E++D 
Sbjct: 366 HTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDL 425

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           MG+ G  PNI TYN ++ GLC  G ++EAY +L  V   GL+ D  TYT +M   C+   
Sbjct: 426 MGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQAD 485

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           +N ++   N+ ++ G TP++ ++ TL + +C++    +   L +       +P K +Y++
Sbjct: 486 TNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTS 545

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++ G  ++G    AV +F+ M   G   D     +L+ GLC +S      L+DA  +++ 
Sbjct: 546 MICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKES-----KLDDARNLYDA 600

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEAL-IHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           M  K     P     +       KK D +  I++   +E     RT+  N +++ LC EG
Sbjct: 601 MMDK--GLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV--NTLVRKLCSEG 656

Query: 420 KIDKALLLL 428
           K+D A L  
Sbjct: 657 KLDMAALFF 665


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 199/411 (48%), Gaps = 8/411 (1%)

Query: 38  STAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM 97
           ++ ES +      SL+ Q     IK   L++ ID+F  + +     SV DF  L+  +V 
Sbjct: 34  ASGESCEAGFGGESLKLQSGFHEIKG--LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVR 91

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           +   +  +  + +     +  + ++F+I+I+C+C+ +    A      +   G HP+V T
Sbjct: 92  MERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVT 151

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           FT L++ LC   R+ EAL +  QM    C+PN+ T+  L+ GLC  GR+ EA  +L  + 
Sbjct: 152 FTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE-RGVTPNVVTFNTLFNGYCKEGTP 276
            DGL+P   TY  ++DG CK G +  A+ LL +  E   + PNVV ++ + +  CK+G  
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                L   M+++   PD  +Y++++ G    G+   A  + +EM+      D    N+L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +        +E    E A +++++M  +  + +  TY  +I    K  + D A    +  
Sbjct: 332 INAF----VKEGKFFE-AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              G  P  ITFN +I   CG  +ID  + LL  M E   +   T+Y+ LI
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 181/381 (47%), Gaps = 16/381 (4%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F+E    G+ P+ +T++ MI  +C+   + +A +++  M +    P+V T+  L+N
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +  K G+  EA E+ D+M   G  PN  TY+ ++ G C   R++ A  M   +   G  P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           ++ T+  ++DG+C   R ++ MELL+E  E G+  +  T+NTL +G+   G     + LL
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-----------GFEVDERM 332
           + M      PD ++  TLL+GL   GK++ A+ +FK M +            G E D + 
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+ GL      E   LE A +++E+M  +  V D  TY  +I  L K  + DEA   
Sbjct: 514 YNILISGL----INEGKFLE-AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
                     P  +TF  +I   C  G++D  L L   M     + +  +Y  LI    +
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628

Query: 453 LEKSYDACALYGAALKQGVIP 473
           +     A  ++   +  GV P
Sbjct: 629 VGNINGALDIFQEMISSGVYP 649



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 213/491 (43%), Gaps = 87/491 (17%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L   +  F  I K G +  V  F  LL  L + +    A+  F +       PN  TF
Sbjct: 128 SKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHP------------------------------ 153
           + ++   C +    EA  ++D M ++G  P                              
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247

Query: 154 ------NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                 NV  ++ +++SLCK GR  +A  +  +M   G  P++ TYN ++ G C  GR  
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV----------- 256
           +A ++L  +    + PDV TY A+++ F K G+  EA EL +E + RG+           
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367

Query: 257 ------------------------TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                                   +PN++TFNTL +GYC       G+ LL  M +   +
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLV 427

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            D  +Y+TL++G    G +  A+ + +EM+  G   D    ++LL GLC  + + KD LE
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDALE 486

Query: 353 DAYQVFEKMTKKVSVTDP--------GTYGIVIRTL---GKGKKTDEALIHLHHAIEMGH 401
             ++V +K  K +  + P         TY I+I  L   GK  + +E    + H    G 
Sbjct: 487 -MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR---GI 542

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           +P TIT++++I  LC + ++D+A  +   M   +  P+  ++  LI    +  +  D   
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 462 LYGAALKQGVI 472
           L+    ++G++
Sbjct: 603 LFCEMGRRGIV 613



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 168/335 (50%), Gaps = 17/335 (5%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D   K + L     +F  +   G + ++  FN L+         +  ++ 
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E +  GL  ++ T++ +I  +    D   A  ++  M  +G  P++ T   L++ LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 168 SGRLKEALEVLDQMGRI-----------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           +G+LK+ALE+   M +            G +P++QTYN L+ GL   G+  EA E+   +
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            + G+ PD  TY++++DG CK  R +EA ++ +    +  +PNVVTF TL NGYCK G  
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
             G+ L   M +R  + + I+Y TL+ G  K G I  A+ IF+EM+  G   D   + ++
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           L GL    W  K+ L+ A  + EK+   + ++  G
Sbjct: 658 LTGL----W-SKEELKRAVAMLEKLQMSMDLSFGG 687



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 132/304 (43%), Gaps = 41/304 (13%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           L++A+++   M R    P++  +  L+  +  + R +    +   ++   ++ D+Y++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++  FC   +   A+    +  + G+ P+VVTF TL +G C E    + + L   M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C P+ ++++TL+NGL + G+I  AV++            +RMM                 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALL-----------DRMM----------------- 211

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFN 409
            ED  Q  +            TYG ++  + K   T  AL  L    E+ HI P  + ++
Sbjct: 212 -EDGLQPTQI-----------TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I +LC +G+   A  L   M E    P   +Y+ +I       +  DA  L    L++
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 470 GVIP 473
            + P
Sbjct: 320 KISP 323


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 204/413 (49%), Gaps = 5/413 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           + S L   + +   + K G    +   N LL      N    AV    +    G  P+S+
Sbjct: 128 RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I      N   EA  ++D M   G  P++ T+ I+VN LCK G +  AL +L +M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +   +P +  YN ++  LC    V +A  +   + N G++P+V TY +++   C  GR 
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A  LL++ IER + PNVVTF+ L + + KEG  ++   L   M KR+  PD  +YS+L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG     ++  A  +F+ M+      +    N+L++G C     +   +++  ++F +M
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC-----KAKRVDEGMELFREM 422

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           +++  V +  TY  +I    + ++ D A I     +  G +P  +T++ ++  LC  GK+
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           + AL++   +      P   +Y+++I  + +  K  D   L+ +   +GV P 
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 200/428 (46%), Gaps = 40/428 (9%)

Query: 58  VDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA 117
           ++R+    L + +++F  + K     S+ +F+ LL A+  +N+ +  +    +  + G++
Sbjct: 54  INRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 113

Query: 118 PNSWTFSIMIRCYCNK-----------------------------NDFFEARKVIDC--- 145
            N +T+SI+I C+C +                             N F    ++ D    
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173

Query: 146 ---MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
              M + GY P+  TF  L++ L +  R  EA+ ++D+M   GC+P++ TY  ++ GLC 
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            G ++ A  +L  ++   ++P V  Y  ++D  C     N+A+ L  E   +G+ PNVVT
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           +N+L    C  G       LL  M +R   P+ +++S L++  +K GK+  A  ++ EM+
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
           +   + D    +SL+ G CM      D L++A  +FE M  K    +  TY  +I+   K
Sbjct: 354 KRSIDPDIFTYSSLINGFCM-----HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
            K+ DE +       + G +  T+T+  +I       + D A ++   M     +P   +
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468

Query: 443 YDMLITKL 450
           Y +L+  L
Sbjct: 469 YSILLDGL 476



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 170/363 (46%), Gaps = 10/363 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + +++F  +   G   +V  +N L+  L        A +  S+     + PN  TFS 
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +  +    EA K+ D M      P++ T++ L+N  C   RL EA  + + M    
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN+ TYN L+KG C   RV+E  E+   +   GL  +  TYT ++ GF +    + A 
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +  + +  GV P+++T++ L +G C  G     + + + +++    PD  +Y+ ++ G+
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GK+     +F  +   G + +     +++ G C      K L E+A  +F +M ++ 
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC-----RKGLKEEADALFREMKEEG 566

Query: 366 SVTDPGTYGIVIRT-LGKGKKTDEA-LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
            + D GTY  +IR  L  G K   A LI    +        TI    ++  +  +G++DK
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI---GLVTNMLHDGRLDK 623

Query: 424 ALL 426
           + L
Sbjct: 624 SFL 626



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 143/291 (49%), Gaps = 1/291 (0%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           ++ AS   ++ ++ K NP  +     +D  +K   L E   ++D + K   +  +  ++ 
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    M +  + A   F    S    PN  T++ +I+ +C      E  ++   M   G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              N  T+T L++   ++     A  V  QM   G  P+I TY+ LL GLC  G+VE A 
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   ++   ++PD+YTY  +++G CK G+  +  +L      +GV PNVVT+ T+ +G+
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           C++G   +   L + MK+   LPD  +Y+TL+   L+ G    +  + +EM
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 185/368 (50%), Gaps = 6/368 (1%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEAS-SYGLAPNSWTFSIMIRCYCNKNDFFEAR 140
           N +V  FN L+   V     + A     E+  S G  P+ +T++ +I   C K     AR
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 427

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           ++++ M   G  PNV T+TIL++  CK GRL+EA  VLD+M   G   N   YNCL+  L
Sbjct: 428 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 487

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C   +V++A  M  ++ + G KPD++T+ +++ G CKV +  EA+ L  + +  GV  N 
Sbjct: 488 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 547

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           +T+NTL + + + G   + + L+  M  R C  D I+Y+ L+  L + G I   +++F++
Sbjct: 548 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 607

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M+  G   +    N L+ GLC         ++ A +    M  +    D  TY  +I  L
Sbjct: 608 MMSKGLNPNNISCNILINGLC-----RTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGL 662

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K  +  EAL         G  P  IT+N +I   C EG  D A LLL    +   IP+ 
Sbjct: 663 CKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 722

Query: 441 TSYDMLIT 448
            ++ +L++
Sbjct: 723 VTWYILVS 730



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 175/346 (50%), Gaps = 5/346 (1%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           +S+   G    +  +N L++ L       +A +  +E    G  PN  T++I+I  +C +
Sbjct: 396 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 455

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
               EAR V+D M   G   N   +  L+++LCK  ++++AL +   M   GCKP+I T+
Sbjct: 456 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 515

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+ GLC V + EEA  +  ++  +G+  +  TY  ++  F + G   EA++L+N+ + 
Sbjct: 516 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 575

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RG   + +T+N L    C+ G   KG+ L + M  +   P+ IS + L+NGL + G I+ 
Sbjct: 576 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 635

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A+   ++M+  G   D    NSL+ GLC     +    ++A  +F+K+  +    D  TY
Sbjct: 636 ALEFLRDMIHRGLTPDIVTYNSLINGLC-----KTGRAQEALNLFDKLQVEGICPDAITY 690

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
             +I    K    D+A + L   ++ G IP  +T+  ++     EG
Sbjct: 691 NTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 203/404 (50%), Gaps = 10/404 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  +   G + +V  F  ++ AL ++NE ++A     + + +G  PN+  +  +I   
Sbjct: 221 NVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHAL 280

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
                  E  K+++ M   G  P+V TF   ++ LCK  R+ EA +++D+M   G  PN 
Sbjct: 281 SKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNS 340

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  L+ GLC +G+V+EA  +L  V N    P+V  +  +++G+   GR +EA  +++E
Sbjct: 341 FTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHE 396

Query: 251 A-IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           + +  G  P++ T+NTL  G CK+G  +    L+  M+ + C P+ I+Y+ L++   K G
Sbjct: 397 SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 456

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A ++  EM   G  ++    N L+  LC    +EK  ++DA  +F  M+ K    D
Sbjct: 457 RLEEARNVLDEMSGKGLALNAVGYNCLISALCK---DEK--VQDALNMFGDMSSKGCKPD 511

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             T+  +I  L K  K +EAL      +  G I  TIT+N +I A    G + +AL L+ 
Sbjct: 512 IFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 571

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M          +Y+ LI  L +        AL+   + +G+ P
Sbjct: 572 DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 615



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 144/283 (50%), Gaps = 1/283 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +DR  K   L+E  ++ D +   G   +   +N L+ AL    + + A+  
Sbjct: 440 PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM 499

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F + SS G  P+ +TF+ +I   C  N F EA  +   M   G   N  T+  L+++  +
Sbjct: 500 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 559

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G ++EAL++++ M   GC  +  TYN L+K LC  G +E+   +  ++ + GL P+  +
Sbjct: 560 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 619

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
              +++G C+ G    A+E L + I RG+TP++VT+N+L NG CK G   + + L   ++
Sbjct: 620 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 679

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
                PD I+Y+TL++   K G    A  +    V  GF  +E
Sbjct: 680 VEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 722



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 110/213 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K +  +E + ++  +  +G   +   +N L+ A +     + A+K  ++    G   +  
Sbjct: 524 KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI 583

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+  C   +  +   + + M   G +PN  +  IL+N LC++G ++ ALE L  M
Sbjct: 584 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 643

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+I TYN L+ GLC  GR +EA  +   ++ +G+ PD  TY  ++   CK G  
Sbjct: 644 IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMF 703

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
           ++A  LL+  ++ G  PN VT+  L + + KEG
Sbjct: 704 DDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 153/369 (41%), Gaps = 43/369 (11%)

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             + R V  C       P   ++ ++++ L      K    V  +M   G  P + T+  
Sbjct: 187 LLDMRGVYSC------EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGV 240

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           ++K LC V  V+ A  +L ++   G  P+   Y  ++    KVGR NE ++LL E +  G
Sbjct: 241 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMG 300

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI---- 311
             P+V TFN   +G CK     +   L+  M  R   P+  +Y  L++GL + GK+    
Sbjct: 301 CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEAR 360

Query: 312 -------RPAVSIF---------------------KEMVRFGFEVDERMMNSLLRGLCMK 343
                   P V +F                     + M+  G   D    N+L+ GLC K
Sbjct: 361 MLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKK 420

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
            +     L  A ++  +M  K    +  TY I+I    K  + +EA   L      G   
Sbjct: 421 GY-----LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 475

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             + +N +I ALC + K+  AL +   M      P   +++ LI  L ++ K  +A  LY
Sbjct: 476 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 535

Query: 464 GAALKQGVI 472
              L +GVI
Sbjct: 536 QDMLLEGVI 544



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 87/179 (48%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   ++E + + + +   G       +N L+ AL      E  +  F +  S GL PN+
Sbjct: 558 LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 617

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            + +I+I   C   +   A + +  M   G  P++ T+  L+N LCK+GR +EAL + D+
Sbjct: 618 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 677

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +   G  P+  TYN L+   C  G  ++A+ +L    + G  P+  T+  ++  F K G
Sbjct: 678 LQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 6/234 (2%)

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            Y  ++D     G       LL +  + G+      F  +   Y + G P +   LL  M
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190

Query: 287 KK-RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           +   +C P   SY+ +L+ LL     +   ++F EM+  G          +++ LC+ + 
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 250

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                ++ A  + + MT+   V +   Y  +I  L K  + +E L  L   + MG IP  
Sbjct: 251 -----VDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDV 305

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
            TFN+ I  LC   +I +A  L+  M      P+  +Y +L+  L ++ K  +A
Sbjct: 306 NTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 359


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 202/395 (51%), Gaps = 15/395 (3%)

Query: 69  RIDIFDSIKKD------GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           RI + +S+ K+      G N  V  F+ ++  L  + + + A     +  ++G +P+  T
Sbjct: 209 RIGVVESVYKEMIRRRIGVN--VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT 266

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  YC     F+A  ++  M     HPN  TF IL++  C+   +  A +V ++M 
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           R G +PN+ TYN L+ GLC  G+++EA  +   +   GLKP+V TY A+++GFCK     
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA E+L++  +RG+ PNV+TFNTL + Y K G       L  +M      P+  +Y+ L+
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
            G  + G ++ A  + KEM   G + D    N L+  LC K    K     A ++ ++M 
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRK-----AVRLLDEMF 501

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +        TY  +I    +   +  AL       + G     +T+N +I+  C +GK++
Sbjct: 502 EVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLE 561

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
           +A  LL  M E   IP+RT+YD+L  + + +EK +
Sbjct: 562 EANRLLNEMLEKGLIPNRTTYDIL--RDEMMEKGF 594



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 177/348 (50%), Gaps = 5/348 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    ++  D+ + +K  G + SV  +N ++       +   A     E  +  + PN  
Sbjct: 241 KVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEI 300

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I+I  +C   +   A+KV + M   G  PNV T+  L+N LC +G+L EAL + D+M
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G KPN+ TYN L+ G C    ++EA EML ++   GL P+V T+  ++D + K GR 
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRM 420

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A  L +  ++ GV PNV T+N L  G+C+EG   +   L K M+      D ++Y+ L
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 480

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K G+ R AV +  EM   G        N+L+ G   +      L  +   + EK 
Sbjct: 481 VDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL--NVRTLMEKK 538

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            ++ ++    TY ++I+      K +EA   L+  +E G IP   T++
Sbjct: 539 GRRANIV---TYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD 583



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 203/419 (48%), Gaps = 5/419 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   +   ++ FD     G   S    N +L++LV           + E     +  N 
Sbjct: 170 VKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNV 229

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF ++I   C    F +A  V++ M   G+ P+V T+  +++  CK+G++ +A  +L +
Sbjct: 230 VTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M      PN  T+N L+ G C    V  A ++   ++  GL+P+V TY ++++G C  G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+ L ++    G+ PNVVT+N L NG+CK+    +   +L  + KR   P+ I+++T
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++   K G++  A  +   M+  G   +    N L+ G C      +  +++A ++ ++
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFC-----REGNVKEARKLAKE 464

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M       D  TY I++  L K  +T +A+  L    E+G  P  +T+N +I     EG 
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGN 524

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
              AL +  LM +  +  +  +Y++LI       K  +A  L    L++G+IP R   D
Sbjct: 525 STAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD 583



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 183/368 (49%), Gaps = 6/368 (1%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            S   S+G A NS    +++  Y    +   A +  D   D G+  +  +   ++ SL K
Sbjct: 148 LSVLGSWGCA-NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVK 206

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            GR+     V  +M R     N+ T++ ++ GLC VG+ ++A +++ ++K  G  P V T
Sbjct: 207 EGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT 266

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++DG+CK G+  +A  LL E + + + PN +TFN L +G+C++        + + M+
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           ++   P+ ++Y++L+NGL   GK+  A+ +  +M   G + +    N+L+ G C     +
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFC-----K 381

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           K +L++A ++ + + K+    +  T+  +I   GK  + D+A +     ++ G  P   T
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I   C EG + +A  L   M  +       +Y++L+  L +  ++  A  L     
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMF 501

Query: 468 KQGVIPQR 475
           + G+ P  
Sbjct: 502 EVGLNPSH 509



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 69/151 (45%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE   +   ++ +G    +  +N L+ AL    E   AV+   E    GL P+  T++ 
Sbjct: 455 VKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNA 514

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  Y  + +   A  V   M   G   N+ T+ +L+   C  G+L+EA  +L++M   G
Sbjct: 515 LIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKG 574

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
             PN  TY+ L   +   G + +    L NV
Sbjct: 575 LIPNRTTYDILRDEMMEKGFIPDIDGHLYNV 605


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 191/373 (51%), Gaps = 10/373 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN---DFFEARKVID 144
           FN ++  L  + +   A     +   +G  PN  T++ +I  YC        ++A  ++ 
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILK 292

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M +N   PN  TF +L++  CK   L  AL+V ++M   G KP + TYN L+ GLC  G
Sbjct: 293 EMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEG 352

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           ++ EA  +L  + +  LKP+V TY A+++G+CK     EA EL +   ++G+TPNV+TFN
Sbjct: 353 KLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFN 412

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL +GYCK G   +   L K+M ++  LP+  +Y+ L+ G  + GK+    ++  EM   
Sbjct: 413 TLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCR 472

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G + D    N L+      +W EK   + A ++ ++M  K       TY I++       
Sbjct: 473 GVKADTVTYNILI-----SAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
               AL       + G     +T+N +IQ  C +GK++ A  LL  M E   IP+RT+Y+
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE 587

Query: 445 MLITKLDQLEKSY 457
             I K + +EK +
Sbjct: 588 --IIKEEMMEKGF 598



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 197/395 (49%), Gaps = 8/395 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV   N LL ALV  NE       + E     ++PN  TF+ +I   C      +A  V+
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGR---LKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           D M   G+ PNV T+  L++  CK GR   + +A  +L +M      PN  T+N L+ G 
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C    +  A ++   +++ GLKP V TY ++++G C  G+ NEA  LL+E +   + PNV
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV 373

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           +T+N L NGYCK+    +   L   + K+   P+ I+++TLL+G  K+GK+  A  + K 
Sbjct: 374 ITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKV 433

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M+  GF  +    N L+ G C      +  +E+   +  +M  +    D  TY I+I   
Sbjct: 434 MLEKGFLPNASTYNCLIVGFC-----REGKMEEVKNLLNEMQCRGVKADTVTYNILISAW 488

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            + K+  +A   +   ++ G  P  +T+N ++   C EG +  AL L   M +  +  + 
Sbjct: 489 CEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANV 548

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            +Y++LI    +  K  DA  L    L++G+IP R
Sbjct: 549 VTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNR 583



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 166/327 (50%), Gaps = 9/327 (2%)

Query: 74  DSIKKDGTNWSVS----DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           D+I K+     VS     FN L+           A+K F E  S GL P   T++ ++  
Sbjct: 288 DAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNG 347

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            CN+    EA+ ++D M  +   PNV T+  L+N  CK   L+EA E+ D +G+ G  PN
Sbjct: 348 LCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPN 407

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + T+N LL G C  G++EEA+ +   +   G  P+  TY  ++ GFC+ G+  E   LLN
Sbjct: 408 VITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLN 467

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E   RGV  + VT+N L + +C++  P K   L+  M  +   P  ++Y+ LLNG    G
Sbjct: 468 EMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +R A+++ K+M + G   +    N L++G C      K  LEDA  +  +M +K  + +
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYC-----RKGKLEDANGLLNEMLEKGLIPN 582

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHA 396
             TY I+   + +     +   HL+HA
Sbjct: 583 RTTYEIIKEEMMEKGFLPDIEGHLYHA 609



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 146/287 (50%), Gaps = 1/287 (0%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E ++ K +P S+     +D   K   L   + +F+ ++  G   +V  +N L+  L    
Sbjct: 293 EMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEG 352

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           +   A     E  S  L PN  T++ +I  YC K    EAR++ D +   G  PNV TF 
Sbjct: 353 KLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFN 412

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L++  CK G+++EA  +   M   G  PN  TYNCL+ G C  G++EE   +L  ++  
Sbjct: 413 TLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCR 472

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G+K D  TY  ++  +C+     +A  L++E +++G+ P+ +T+N L NGYC EG     
Sbjct: 473 GVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAA 532

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
           + L K M+K     + ++Y+ L+ G  + GK+  A  +  EM+  G 
Sbjct: 533 LNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGL 579



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 105/205 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E  ++FD+I K G   +V  FN LL       + E A          G  PN+ 
Sbjct: 385 KKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAS 444

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C +    E + +++ M   G   +  T+ IL+++ C+    K+A  ++D+M
Sbjct: 445 TYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEM 504

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP+  TYN LL G C  G +  A  +   ++ +G   +V TY  ++ G+C+ G+ 
Sbjct: 505 LDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKL 564

Query: 242 NEAMELLNEAIERGVTPNVVTFNTL 266
            +A  LLNE +E+G+ PN  T+  +
Sbjct: 565 EDANGLLNEMLEKGLIPNRTTYEII 589



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 47/107 (43%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K+   + D +   G   S   +N LL    M      A+    +    G   N  T++++
Sbjct: 495 KKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVL 554

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           I+ YC K    +A  +++ M + G  PN TT+ I+   + + G L +
Sbjct: 555 IQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 199/408 (48%), Gaps = 42/408 (10%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A++       +G  P+ + ++ +I  +C  +    A KV+D M   G+ P+V T+ IL
Sbjct: 129 EKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNIL 187

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + + C  GRL  AL V+DQ+ +  CKP + TY  L++     G ++EA ++L  + + GL
Sbjct: 188 IGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGL 247

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAME-----------------------LLNEA------- 251
           +PD YTY  V++G CK G  + A E                       LLNE        
Sbjct: 248 RPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEK 307

Query: 252 -----IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
                + +G  PN +T++TL    C++G   +   +LK+MK++   PD  SY  L++ L 
Sbjct: 308 LMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALC 367

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           + GK+  A+    +M+  G   D    NS+L  LC          ++A  +FEK+ +   
Sbjct: 368 REGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNA-----DEALNIFEKLGEVGC 422

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             + G+Y  +   L        AL  +   +  G  P  IT+N++I  LC +G +D+A+ 
Sbjct: 423 PPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIE 482

Query: 427 LLFLMYEHAKI-PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LL  M+E  K  P+  SY+ ++  L ++++  DA  +  A + +G +P
Sbjct: 483 LLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLP 530



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 157/303 (51%), Gaps = 6/303 (1%)

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D  Y    T F   +N  CKS +  E+L  L  M   G KP++     L+KG   + ++E
Sbjct: 70  DQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIE 129

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A +++  ++  G KPDV+ Y AV+ GFCK  R + A ++L+   +RG  P+VVT+N L 
Sbjct: 130 KAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILI 188

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             +C  G     + ++  + K NC P  I+Y+ L+   +  G I  A+ +  EM+  G  
Sbjct: 189 GNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLR 248

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    N ++ G+C     ++ +L+ A++   +++K   V    TY I++R L    K +
Sbjct: 249 PDRYTYNVVVNGMC-----KEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWE 303

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                +   +  G  P  IT++ +I ALC +GKID+A  +L +M E A  P   SYD LI
Sbjct: 304 YGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLI 363

Query: 448 TKL 450
           + L
Sbjct: 364 SAL 366



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 177/391 (45%), Gaps = 39/391 (9%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D + KD    +V  +  L+ A +     + A+K   E  S GL P+ +T+++++   C
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMC 262

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +     A + +  +  NG    V+T+ IL+  L   G+ +   +++  M   GC+PN  
Sbjct: 263 KEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPI 322

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY+ L+  LC  G+++EA  +L  +K   L PD Y+Y  ++   C+ G+ + A+E L++ 
Sbjct: 323 TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDM 382

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I  G  P+++++N++    CK G   + + + + + +  C P+  SY+TL   L   G  
Sbjct: 383 ISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDK 442

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ +  EM+  G + DE   NSL+  LC        L++ A ++   M +        
Sbjct: 443 IRALGMILEMLSNGIDPDEITYNSLISCLC-----RDGLVDQAIELLVDMFESEKCQ--- 494

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
                                          P  I++N V+  LC   +I  A+ +L  M
Sbjct: 495 -------------------------------PTVISYNTVLLGLCKVQRIIDAIEVLAAM 523

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
                +P+ T+Y +LI  +      YDA  L
Sbjct: 524 VNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 169/377 (44%), Gaps = 39/377 (10%)

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVT---------------------------------- 156
           C    + E+   +  M + GY P+V                                   
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGKPDVF 147

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
            +  +++  CK+ R+  A +VLD+M + G +P++ TYN L+   C  GR++ A  ++  +
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL 207

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
             D  KP V TYT +++     G  +EAM+LL+E + RG+ P+  T+N + NG CKEG  
Sbjct: 208 LKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGML 267

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            +    L  + K  C+    +Y+ LL  LL  GK      +  +M+  G E +    ++L
Sbjct: 268 DRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTL 327

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +  LC         +++A  V + M +K    D  +Y  +I  L +  K D A+  L   
Sbjct: 328 ITALCRDGK-----IDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDM 382

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           I  GH+P  +++N+++ +LC  G  D+AL +   + E    P+  SY+ L   L      
Sbjct: 383 ISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDK 442

Query: 457 YDACALYGAALKQGVIP 473
             A  +    L  G+ P
Sbjct: 443 IRALGMILEMLSNGIDP 459


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 185/368 (50%), Gaps = 6/368 (1%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEAS-SYGLAPNSWTFSIMIRCYCNKNDFFEAR 140
           N +V  FN L+   V     + A     E+  S G  P+ +T++ +I   C K     AR
Sbjct: 350 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 409

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           ++++ M   G  PNV T+TIL++  CK GRL+EA  VLD+M   G   N   YNCL+  L
Sbjct: 410 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 469

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C   +V++A  M  ++ + G KPD++T+ +++ G CKV +  EA+ L  + +  GV  N 
Sbjct: 470 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 529

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           +T+NTL + + + G   + + L+  M  R C  D I+Y+ L+  L + G I   +++F++
Sbjct: 530 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 589

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M+  G   +    N L+ GLC         ++ A +    M  +    D  TY  +I  L
Sbjct: 590 MMSKGLNPNNISCNILINGLCRTGN-----IQHALEFLRDMIHRGLTPDIVTYNSLINGL 644

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K  +  EAL         G  P  IT+N +I   C EG  D A LLL    +   IP+ 
Sbjct: 645 CKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 704

Query: 441 TSYDMLIT 448
            ++ +L++
Sbjct: 705 VTWYILVS 712



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 174/346 (50%), Gaps = 5/346 (1%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           +S+   G    +  +N L++ L       +A +  +E    G  PN  T++I+I  +C +
Sbjct: 378 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 437

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
               EAR V+D M   G   N   +  L+++LCK  ++++AL +   M   GCKP+I T+
Sbjct: 438 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 497

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+ GLC V + EEA  +  ++  +G+  +  TY  ++  F + G   EA++L+N+ + 
Sbjct: 498 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 557

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RG   + +T+N L    C+ G   KG+ L + M  +   P+ IS + L+NGL + G I+ 
Sbjct: 558 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 617

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A+   ++M+  G   D    NSL+ GLC          ++A  +F+K+  +    D  TY
Sbjct: 618 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA-----QEALNLFDKLQVEGICPDAITY 672

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
             +I    K    D+A + L   ++ G IP  +T+  ++     EG
Sbjct: 673 NTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 203/405 (50%), Gaps = 10/405 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  +   G + +V  F  ++ AL ++NE ++A     + + +G  PN+  +  +I   
Sbjct: 203 NVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHAL 262

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
                  E  K+++ M   G  P+V TF   ++ LCK  R+ EA +++D+M   G  PN 
Sbjct: 263 XKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNS 322

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  L+ GLC +G+V+EA  +L  V N    P+V  +  +++G+   GR +EA  +++E
Sbjct: 323 FTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHE 378

Query: 251 A-IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           + +  G  P++ T+NTL  G CK+G  +    L+  M+ + C P+ I+Y+ L++   K G
Sbjct: 379 SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 438

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A ++  EM   G  ++    N L+  LC    +EK  ++DA  +F  M+ K    D
Sbjct: 439 RLEEARNVLDEMSGKGLALNAVGYNCLISALCK---DEK--VQDALNMFGDMSSKGCKPD 493

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             T+  +I  L K  K +EAL      +  G I  TIT+N +I A    G + +AL L+ 
Sbjct: 494 IFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 553

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            M          +Y+ LI  L +        AL+   + +G+ P 
Sbjct: 554 DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 598



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 144/283 (50%), Gaps = 1/283 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +DR  K   L+E  ++ D +   G   +   +N L+ AL    + + A+  
Sbjct: 422 PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM 481

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F + SS G  P+ +TF+ +I   C  N F EA  +   M   G   N  T+  L+++  +
Sbjct: 482 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 541

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G ++EAL++++ M   GC  +  TYN L+K LC  G +E+   +  ++ + GL P+  +
Sbjct: 542 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 601

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
              +++G C+ G    A+E L + I RG+TP++VT+N+L NG CK G   + + L   ++
Sbjct: 602 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 661

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
                PD I+Y+TL++   K G    A  +    V  GF  +E
Sbjct: 662 VEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 704



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 110/213 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K +  +E + ++  +  +G   +   +N L+ A +     + A+K  ++    G   +  
Sbjct: 506 KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI 565

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+  C   +  +   + + M   G +PN  +  IL+N LC++G ++ ALE L  M
Sbjct: 566 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 625

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+I TYN L+ GLC  GR +EA  +   ++ +G+ PD  TY  ++   CK G  
Sbjct: 626 IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMF 685

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
           ++A  LL+  ++ G  PN VT+  L + + KEG
Sbjct: 686 DDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 153/369 (41%), Gaps = 43/369 (11%)

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             + R V  C       P   ++ ++++ L      K    V  +M   G  P + T+  
Sbjct: 169 LLDMRGVYSC------EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGV 222

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           ++K LC V  V+ A  +L ++   G  P+   Y  ++    KVGR NE ++LL E +  G
Sbjct: 223 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMG 282

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI---- 311
             P+V TFN   +G CK     +   L+  M  R   P+  +Y  L++GL + GK+    
Sbjct: 283 CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEAR 342

Query: 312 -------RPAVSIF---------------------KEMVRFGFEVDERMMNSLLRGLCMK 343
                   P V +F                     + M+  G   D    N+L+ GLC K
Sbjct: 343 MLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKK 402

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
            +     L  A ++  +M  K    +  TY I+I    K  + +EA   L      G   
Sbjct: 403 GY-----LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 457

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             + +N +I ALC + K+  AL +   M      P   +++ LI  L ++ K  +A  LY
Sbjct: 458 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 517

Query: 464 GAALKQGVI 472
              L +GVI
Sbjct: 518 QDMLLEGVI 526



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 87/179 (48%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   ++E + + + +   G       +N L+ AL      E  +  F +  S GL PN+
Sbjct: 540 LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 599

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            + +I+I   C   +   A + +  M   G  P++ T+  L+N LCK+GR +EAL + D+
Sbjct: 600 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 659

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +   G  P+  TYN L+   C  G  ++A+ +L    + G  P+  T+  ++  F K G
Sbjct: 660 LQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 6/234 (2%)

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            Y  ++D     G       LL +  + G+      F  +   Y + G P +   LL  M
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172

Query: 287 KK-RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           +   +C P   SY+ +L+ LL     +   ++F EM+  G          +++ LC+ + 
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                ++ A  + + MT+   V +   Y  +I  L K  + +E L  L   + MG IP  
Sbjct: 233 -----VDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDV 287

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
            TFN+ I  LC   +I +A  L+  M      P+  +Y +L+  L ++ K  +A
Sbjct: 288 NTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 341


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 227/494 (45%), Gaps = 78/494 (15%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R +   R  D IK   + + +D+F  + K     S+ +FN LL A+  +N+ E  +    
Sbjct: 51  REILRNRLSDIIK---VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGE 107

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           +  + G++ + +T+SI I C+C ++    A  V+  M   GY P++ T + L+N  C S 
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK 167

Query: 170 RLK-----------------------------------EALEVLDQMGRIGCKPNIQTY- 193
           R+                                    EA+ ++DQM + GC+P++ TY 
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227

Query: 194 ----------------------------------NCLLKGLCYVGRVEEAYEMLMNVKND 219
                                             N ++ GLC    +++A  +   + N 
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G++PDV+TY++++   C  GR ++A  LL++ IER + PNVVTF+ L + + KEG  ++ 
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             L   M KR+  PD  +YS+L+NG     ++  A  +F+ M+      +    ++L++G
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
            C     +   +E+  ++F +M+++  V +  TY  +I    + +  D A +     + +
Sbjct: 408 FC-----KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 462

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P  +T+N ++  LC  GK+ KA+++   +      P   +Y+++I  + +  K  D 
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522

Query: 460 CALYGAALKQGVIP 473
             L+     +GV P
Sbjct: 523 WELFCNLSLKGVSP 536



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 184/394 (46%), Gaps = 45/394 (11%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +   ++K      V  +N ++  L      + A+  F+E  + G+ P+ +T+S +I C
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            CN   + +A +++  M +   +PNV TF+ L+++  K G+L EA ++ D+M +    P+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           I TY+ L+ G C   R++EA  M   + +    P+V TY+ ++ GFCK  R  E MEL  
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422

Query: 250 EAIERG-----------------------------------VTPNVVTFNTLFNGYCKEG 274
           E  +RG                                   V PN++T+N L +G CK G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              K + + + +++    PD  +Y+ ++ G+ K GK+     +F  +   G   +    N
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT-LGKGKKTDEA-LIH 392
           +++ G C K  +     E+A  + +KM +   + + GTY  +IR  L  G +   A LI 
Sbjct: 543 TMISGFCRKGSK-----EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
              +        TI    ++  +  +G++DK+ L
Sbjct: 598 EMRSCGFAGDASTI---GLVTNMLHDGRLDKSFL 628



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 184/417 (44%), Gaps = 40/417 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + + D + + G       F  L+  L + N+   AV    +    G  P+  T+  
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C + D   A  ++  M       +V  +  +++ LCK   + +AL +  +M   G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMN--------------------VKNDGL---- 221
            +P++ TY+ L+  LC  GR  +A  +L +                    VK   L    
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348

Query: 222 -----------KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
                       PD++TY+++++GFC   R +EA  +    I +   PNVVT++TL  G+
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK     +G+ L + M +R  + + ++Y+TL++G  +      A  +FK+MV  G   + 
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N LL GLC     +   L  A  VFE + +     D  TY I+I  + K  K ++  
Sbjct: 469 LTYNILLDGLC-----KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
               +    G  P  I +N +I   C +G  ++A  LL  M E   +P+  +Y+ LI
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 150/299 (50%), Gaps = 1/299 (0%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           ++ AS   ++ ++ K NP  +     +D  +K   L E   ++D + K   +  +  ++ 
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    M +  + A   F    S    PN  T+S +I+ +C      E  ++   M   G
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              N  T+T L++   ++     A  V  QM  +G  PNI TYN LL GLC  G++ +A 
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   ++   ++PD+YTY  +++G CK G+  +  EL      +GV+PNV+ +NT+ +G+
Sbjct: 489 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           C++G+  +   LLK MK+   LP+  +Y+TL+   L+ G    +  + KEM   GF  D
Sbjct: 549 CRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 195/386 (50%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN +L++LV +    TA+  + +     + P+ +T +I+I C+C+      A   +  + 
Sbjct: 61  FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKIL 120

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             GY PN  T   L+  LC  G++KEAL   D++   G + +  +Y  L+ G+C +G   
Sbjct: 121 KLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETR 180

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A  +L  ++   ++P+V  Y+ ++D  CK    +EA +L  E + +G++P+VVT++ L 
Sbjct: 181 AAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILV 240

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G+C  G   + + LL  M   N  PD  +Y+ L++ L K GK++ A ++   MV+    
Sbjct: 241 SGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVN 300

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           +D  + ++L+ G C+ +      + +A +VF  MT+     D   Y I+I  L K K+ D
Sbjct: 301 LDVVVYSTLMDGYCLVNE-----VNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVD 355

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EAL       +   +P T+T+ ++I  LC  G+I     L   M +  + P   +Y+ LI
Sbjct: 356 EALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLI 415

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L +      A AL+     Q + P
Sbjct: 416 DALCKNGHLDRAIALFNKMKDQAIRP 441



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 184/382 (48%), Gaps = 5/382 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE +   D +   G   S   +  L+  +  + E   A++       + + PN   +S+
Sbjct: 144 VKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSM 203

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G  P+V T++ILV+  C  G+L  A+++L++M    
Sbjct: 204 IIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLEN 263

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+I TY  L+  LC  G+V+EA  +L  +    +  DV  Y+ +MDG+C V   N A 
Sbjct: 264 INPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAK 323

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +     + GVTP+V  ++ + NG CK     + + L + + ++N +PD ++Y++L++ L
Sbjct: 324 RVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCL 383

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I     +F EM+  G   D    N+L+  LC         L+ A  +F KM  + 
Sbjct: 384 CKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGH-----LDRAIALFNKMKDQA 438

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  T+ I++  L K  +   AL      +  G+     T+  +I  LC EG +D+AL
Sbjct: 439 IRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEAL 498

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
            L   M ++  I    +++++I
Sbjct: 499 ALQSRMEDNGCISDAVTFEIMI 520



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 175/342 (51%), Gaps = 6/342 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +DR+ K + + E  D++  +   G +  V  ++ L+    ++ +   A+  
Sbjct: 196 PNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDL 255

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            +E     + P+ +T++I++   C +    EA  V+  M     + +V  ++ L++  C 
Sbjct: 256 LNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCL 315

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              +  A  V   M ++G  P++  Y+ ++ GLC + RV+EA  +   +    + PD  T
Sbjct: 316 VNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVT 375

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           YT+++D  CK GR +   +L +E ++RG  P+V+T+N L +  CK G   + + L   MK
Sbjct: 376 YTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMK 435

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            +   P+  +++ LL+GL K G+++ A+  F++++  G+ ++ R    ++ GLC     +
Sbjct: 436 DQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLC-----K 490

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
           + LL++A  +  +M     ++D  T+ I+IR      + D+A
Sbjct: 491 EGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKA 532



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 138/280 (49%), Gaps = 1/280 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        VD + K   +KE  ++   + K   N  V  ++ L+    ++NE   A +
Sbjct: 265 NPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKR 324

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F   +  G+ P+   +SIMI   C      EA  + + +      P+  T+T L++ LC
Sbjct: 325 VFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLC 384

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSGR+    ++ D+M   G  P++ TYN L+  LC  G ++ A  +   +K+  ++P+VY
Sbjct: 385 KSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVY 444

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+T ++DG CKVGR   A+E   + + +G   NV T+  + NG CKEG   + + L   M
Sbjct: 445 TFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRM 504

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
           +   C+ D +++  ++       +   A  + +EM+  G 
Sbjct: 505 EDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 212/464 (45%), Gaps = 40/464 (8%)

Query: 50  RSLQAQRFVD---RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVML---NEQET 103
           R L+ +R +    R  +  L E + +FD +       SV  FN LL  +      +  E 
Sbjct: 11  RCLELERVIASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASER 70

Query: 104 AVKFFSEAS---SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
            V  F+  +   S  +APN+ T+SI+I C+C              +   G+  NV   + 
Sbjct: 71  VVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQ 130

Query: 161 LVNSLCKSGRLKEALEV-LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           L+  LC + R+ EA ++ L +M   GC P++  YN ++ G    G+VE+AY + + + + 
Sbjct: 131 LLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQ 190

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G+ P+V TYT V+DG CK    + A  +  + I+RGV P+  T+N L +GY   G   + 
Sbjct: 191 GIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEV 250

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           V +L+ M      PD I+Y+ LL+ L K G+ R A   F  M R G + D  +   LL G
Sbjct: 251 VQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHG 310

Query: 340 LCMK------------------------------SWEEKDLLEDAYQVFEKMTKKVSVTD 369
              K                              ++ +K ++E+A  +F KM ++    D
Sbjct: 311 YATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPD 370

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             ++G +I  L K  + D+A++  +  I  G  P    F++++  LC  GK +KA  L F
Sbjct: 371 VVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFF 430

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            + +         ++ L+  L    +  +A  L    ++ GV P
Sbjct: 431 EVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRP 474



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 192/394 (48%), Gaps = 40/394 (10%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           F    K + ++E + IF+ +++ G +  V  F  L+ AL  L   + AV  F++  + G+
Sbjct: 343 FCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGV 402

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            PN + FS ++   C    + +A ++   + D G   +   F  L+ +LC  GR+ EA  
Sbjct: 403 TPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQR 462

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           ++D M R+G +PN+ +YN L+ G C  GR++EA ++L  + ++GLKP+ +TYT ++ G+C
Sbjct: 463 LIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYC 522

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K  R ++A  L  E + +GVTP V T+N                                
Sbjct: 523 KARRVDDAYSLFREMLMKGVTPVVATYN-------------------------------- 550

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
              T+L+GL + G+   A  ++  M+    + D    N +L GLC     + + +++A++
Sbjct: 551 ---TILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLC-----KNNFVDEAFK 602

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +F ++  K    D  T+ I+I  L KG + ++A+         G +P  +T+  + + L 
Sbjct: 603 MFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLI 662

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            EG + +   L   M +    P+    + L+ +L
Sbjct: 663 EEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRL 696



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 189/395 (47%), Gaps = 7/395 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V  +N ++       + E A   F E    G+ PN  T++ +I   C       A
Sbjct: 156 GCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRA 215

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
           + V   M D G  P+  T+  L++    +G+ KE +++L++M   G +P+  TY  LL  
Sbjct: 216 KGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDY 275

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC  GR  EA     ++   G+KPDV  Y  ++ G+   G  +E    L+  +  GV+PN
Sbjct: 276 LCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPN 335

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
              FN +F  Y K+    + + +   M+++   PD +S+  L++ L K G++  AV  F 
Sbjct: 336 RRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFN 395

Query: 320 EMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           +M+  G   +  + +SL+ GLC +  WE+ + L      FE + + + V D   +  ++ 
Sbjct: 396 QMINEGVTPNIFVFSSLVYGLCTVGKWEKAEEL-----FFEVLDQGICV-DAVFFNTLMC 449

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L    +  EA   +   I +G  P  I++N ++   C  G+ID+A  LL +M  +   P
Sbjct: 450 NLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKP 509

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +  +Y +L+    +  +  DA +L+   L +GV P
Sbjct: 510 NEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTP 544



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 188/407 (46%), Gaps = 5/407 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE + + + +   G       +  LL  L        A  FF      G+ P+   ++I+
Sbjct: 248 KEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAIL 307

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  Y  K    E    +D M  NG  PN   F I+  +  K   ++EA+ + ++M + G 
Sbjct: 308 LHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGL 367

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P++ ++  L+  LC +GRV++A      + N+G+ P+++ +++++ G C VG+  +A E
Sbjct: 368 SPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEE 427

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L  E +++G+  + V FNTL    C EG  M+   L+ LM +    P+ ISY+TL+ G  
Sbjct: 428 LFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHC 487

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             G+I  A  +   MV  G + +E     LLRG C     +   ++DAY +F +M  K  
Sbjct: 488 LTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYC-----KARRVDDAYSLFREMLMKGV 542

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                TY  ++  L +  +  EA     + I         T+N ++  LC    +D+A  
Sbjct: 543 TPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFK 602

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   +          +++++I  L +  +  DA  L+      G++P
Sbjct: 603 MFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVP 649



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/211 (19%), Positives = 88/211 (41%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + +   +F  +   G    V+ +N +L  L        A + +    +     + +
Sbjct: 523 KARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIY 582

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I++   C  N   EA K+   +       +  TF I++ +L K GR ++A+++   +
Sbjct: 583 TYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATI 642

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ TY  + + L   G + E   +   ++  G  P+ +   A++      G  
Sbjct: 643 SAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDI 702

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           + A   L +  E+  +    T + L + Y +
Sbjct: 703 SRAGVYLYKLDEKNFSLEASTTSMLISLYSR 733


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 198/403 (49%), Gaps = 14/403 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +  + +  G    V  +N L+         + A +  +   S  + P+++T++ +IR  C
Sbjct: 96  VLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIA---SMPVPPDAYTYTPIIRGLC 152

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           ++    +A  ++D M   G  P+V T+T+L+ ++CKS    EA+ VLD+M   GC PNI 
Sbjct: 153 DRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIV 212

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN ++ G+C  GRV++A E+L  + + G +PD+ +YT V+ G C   R ++   L  E 
Sbjct: 213 TYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEM 272

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++   PN VTF+ L   +C+ G   + + +L+ M +  C P+    + ++N + K G++
Sbjct: 273 VDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRV 332

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDP 370
             A      M  +G   D     ++LRGLC    WE       A ++  +M +K    + 
Sbjct: 333 DDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEH------AKELLPEMVRKNCPPNE 386

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            T+   I  L +    ++A+  +    E G     +T+N ++   C +G++D AL L   
Sbjct: 387 VTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN 446

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +      P+  +Y  L+T L   E+  DA A   A + Q   P
Sbjct: 447 LPCE---PNTITYTTLLTGLCHAER-LDAAAELLAGMIQKDCP 485



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 201/451 (44%), Gaps = 62/451 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+S   E +++ D ++  G   ++  +N ++  +      + A +  +  SSYG  P+  
Sbjct: 188 KSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIV 247

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +++  C    + + + +   M D    PN  TF +LV   C+ G ++ A++VL QM
Sbjct: 248 SYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM 307

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC PN    N ++  +C  GRV++AY+ L N+   G  PD  +YT V+ G C+ GR 
Sbjct: 308 SQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRW 367

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL--------- 292
             A ELL E + +   PN VTFNT     C++G   + + L++LM +  C          
Sbjct: 368 EHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNAL 427

Query: 293 -----------------------PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
                                  P+ I+Y+TLL GL    ++  A  +   M++    ++
Sbjct: 428 VHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLN 487

Query: 330 ERMMNSLLRGLCMKSWEEKDL------------------------------LEDAYQVFE 359
               N L+   C K + E+ +                               E+A ++  
Sbjct: 488 AVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLH 547

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            +  K    D  TY  V+  L +  +T+EA+  LH   +MG  P+   +N ++ ALC   
Sbjct: 548 GLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRC 607

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           + D+A+     M  +  +P+ ++Y +LI  L
Sbjct: 608 ETDQAIDFFAYMVSNGCMPNESTYIILIEGL 638



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 164/319 (51%), Gaps = 10/319 (3%)

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           ++D  EA ++++     G  P+V   T L+ +LC+ GR  +A  VL      G   ++  
Sbjct: 52  RDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFA 111

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN L+ G C  GR++ A  ++ ++    + PD YTYT ++ G C  GR  +A+ LL++ +
Sbjct: 112 YNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDML 168

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           +RG  P+VVT+  L    CK     + + +L  M+ + C P+ ++Y+ ++NG+ + G++ 
Sbjct: 169 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 228

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
            A  I   +  +GF+ D     ++L+GLC  + W++  +L      F +M  K  V +  
Sbjct: 229 DAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVL------FAEMVDKKCVPNEV 282

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           T+ +++R   +G   + A+  L    + G  P T   N VI A+C +G++D A   L  M
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 432 YEHAKIPSRTSYDMLITKL 450
             +   P   SY  ++  L
Sbjct: 343 GMYGCNPDTISYTTVLRGL 361



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 177/364 (48%), Gaps = 14/364 (3%)

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           L  L+  ++   A +    +SS G AP+ +  + +IR  C +    +A +V+     +G 
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
             +V  +  LV   C+ GRL  A  ++  M      P+  TY  +++GLC  GRV +A  
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +L ++   G +P V TYT +++  CK     EAM +L+E   +G TPN+VT+N + NG C
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL---KWGKIRPAVSIFKEMVRFGFEV 328
           +EG       +L  +      PD +SY+T+L GL    +W  ++    +F EMV      
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVK---VLFAEMVDKKCVP 279

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +E   + L+R  C        ++E A QV ++M++     +     IVI  + K  + D+
Sbjct: 280 NEVTFDMLVRFFC-----RGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDD 334

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   L++    G  P TI++  V++ LC  G+ + A  LL  M      P+  +++  I 
Sbjct: 335 AYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFIC 394

Query: 449 KLDQ 452
            L Q
Sbjct: 395 ILCQ 398



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 187/403 (46%), Gaps = 43/403 (10%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+    +    G  P+  T+++++   C  + F EA  V+D M   G  PN+ T+ +++N
Sbjct: 160 ALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIIN 219

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV-------------------- 203
            +C+ GR+ +A E+L+++   G +P+I +Y  +LKGLC                      
Sbjct: 220 GMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVP 279

Query: 204 ---------------GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
                          G VE A ++L  +   G  P+      V++  CK GR ++A + L
Sbjct: 280 NEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFL 339

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           N     G  P+ +++ T+  G C+ G       LL  M ++NC P++++++T +  L + 
Sbjct: 340 NNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQK 399

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G I  A+ + + M  +G  V     N+L+ G C++       ++ A ++F  +  + +  
Sbjct: 400 GLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGR-----VDSALELFNNLPCEPNTI 454

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
              TY  ++  L   ++ D A   L   I+       +TFN ++   C +G +++A+ L+
Sbjct: 455 ---TYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELV 511

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
             M EH   P+  +++ L+  + +   S +A  L    + +GV
Sbjct: 512 NQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGV 554



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 188/394 (47%), Gaps = 9/394 (2%)

Query: 40  AESLDLKENPRSLQAQRFVDRIKASPLKER-IDIFDSIKKDGTNWSVSDFNDLLMALVML 98
           AE +D K  P  +     V       + ER I +   + + G   + +  N ++ A+   
Sbjct: 270 AEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQ 329

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
              + A  F +    YG  P++ +++ ++R  C    +  A++++  M      PN  TF
Sbjct: 330 GRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTF 389

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
              +  LC+ G +++A+++++ M   GC   I TYN L+ G C  GRV+ A E+  N+  
Sbjct: 390 NTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP- 448

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
              +P+  TYT ++ G C   R + A ELL   I++    N VTFN L + +C++G   +
Sbjct: 449 --CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEE 506

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            + L+  M +  C P+ I+++TLL+G+ K      A+ +   +V  G  +D    +S++ 
Sbjct: 507 AMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVD 566

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
            L       +D  E+A Q+   +         G Y  ++  L K  +TD+A+    + + 
Sbjct: 567 VL-----SREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVS 621

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
            G +P   T+  +I+ L  EG + +A  +L  +Y
Sbjct: 622 NGCMPNESTYIILIEGLAHEGLLKEARYVLSELY 655



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 155/345 (44%), Gaps = 8/345 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  D  +++   G N     +  +L  L      E A +   E       PN  
Sbjct: 328 KQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEV 387

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+  I   C K    +A K+I+ M + G    + T+  LV+  C  GR+  ALE+ + +
Sbjct: 388 TFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL 447

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C+PN  TY  LL GLC+  R++ A E+L  +       +  T+  ++  FC+ G  
Sbjct: 448 P---CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFV 504

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EAMEL+N+ +E G TPN++TFNTL +G  K+    + + LL  +  +    D I+YS++
Sbjct: 505 EEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSV 564

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L +  +   A+ +   +   G      M N +L  LC +   ++     A   F  M
Sbjct: 565 VDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQ-----AIDFFAYM 619

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
                + +  TY I+I  L       EA   L      G + +++
Sbjct: 620 VSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSL 664



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 8/231 (3%)

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA  L+  +  RG  P+V     L    C+ G       +L+  +      D  +Y+TL+
Sbjct: 57  EAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLV 116

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
            G  ++G++  A  +   M       D      ++RGLC     ++  + DA  + + M 
Sbjct: 117 AGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLC-----DRGRVGDALALLDDML 168

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           ++       TY +++  + K     EA+  L      G  P  +T+N +I  +C EG++D
Sbjct: 169 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 228

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            A  +L  +  +   P   SY  ++  L    +  D   L+   + +  +P
Sbjct: 229 DAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVP 279


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 197/425 (46%), Gaps = 41/425 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +   + IF S++  G   +   ++ L+  L    + + A++  ++       P++ 
Sbjct: 138 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 197

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG------------ 169
           T++++I   C   D   AR   D M + G  P+V T+ IL++  CK+G            
Sbjct: 198 TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQE 257

Query: 170 ------------------------RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
                                   +++EA+ +++++   GC P I TYN LL GLC +GR
Sbjct: 258 TTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGR 317

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +EEA ++L  + ++G  PDV TYT+++DG  K  RS EA +L  E   RG+  + V +  
Sbjct: 318 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTA 377

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L     + G   +   + K M    C+PD ++ ST+++GL K G+I  AV IFK M   G
Sbjct: 378 LIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 437

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              +E + ++L+ GLC     +   ++ A ++  +M K     D  TY I+I  L K   
Sbjct: 438 LAPNEVVYSALIHGLC-----KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 492

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            + A       +E G  P   T+N +I   C  G  D A  +   M       +  +Y  
Sbjct: 493 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGA 552

Query: 446 LITKL 450
           LI+ L
Sbjct: 553 LISGL 557



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 194/417 (46%), Gaps = 12/417 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   + +   ++ ++   G    V   + ++  L        AV+ F    + GLAPN 
Sbjct: 102 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNE 161

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             +S +I   C       A +++  M      P+  T+ +L++ LCKSG ++ A    D+
Sbjct: 162 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDE 221

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEA-YEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           M   GCKP++ TYN L+ G C  G  + A + +      +G   D++TYTA++D   K  
Sbjct: 222 MLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNK 281

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           +  EA+ L+ +    G TP + T+N L NG CK G   + + LL+ +    C PD ++Y+
Sbjct: 282 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 341

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           +L++GL K  +   A  +FKEM   G  +D     +L+R L      +   +  A  V++
Sbjct: 342 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELL-----QTGKIPQASSVYK 396

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            MT    V D  T   +I  L K  +   A+         G  P  + ++ +I  LC   
Sbjct: 397 TMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 456

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD---ACALYGAALKQGVIP 473
           K+D AL +L  M +    P   +Y++LI   D L KS D   A A +   L+ G  P
Sbjct: 457 KMDCALEMLAQMKKAFCTPDTITYNILI---DGLCKSGDVEAARAFFDEMLEAGCKP 510



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 176/362 (48%), Gaps = 4/362 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E AV    + ++ G  P   T++ ++   C      EA  ++  + DNG  P+V T+T L
Sbjct: 3   EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ L K  R  EA ++  +M   G   +   Y  L++ L   G++ +A  +   + + G 
Sbjct: 63  IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PDV T + ++DG  K GR   A+ +      RG+ PN V ++ L +G CK       + 
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 182

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +L  MKK  C PD I+Y+ L++GL K G +  A + F EM+  G + D    N L+ G C
Sbjct: 183 MLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFC 242

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                +      ++ + ++ T      D  TY  ++  L K KK +EA+  +      G 
Sbjct: 243 KAGNTDA----ASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGC 298

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P   T+N ++  LC  G++++A+ LL  + ++   P   +Y  LI  L + ++S++A  
Sbjct: 299 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 358

Query: 462 LY 463
           L+
Sbjct: 359 LF 360



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 186/430 (43%), Gaps = 41/430 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E ID+   I  +G    V  +  L+  L        A K F E +  GLA ++ 
Sbjct: 33  KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTV 92

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +IR         +A  V   M  +G  P+V T + +++ L K+GR+  A+ +   M
Sbjct: 93  CYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 152

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN   Y+ L+ GLC   +++ A EML  +K     PD  TY  ++DG CK G  
Sbjct: 153 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDV 212

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG------------TPMKG---------- 279
             A    +E +E G  P+V T+N L +G+CK G            T + G          
Sbjct: 213 EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTA 272

Query: 280 --------------VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
                         V L++ +    C P   +Y+ LLNGL K G++  A+ + +++V  G
Sbjct: 273 IVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 332

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              D     SL+ GL     +EK   E AY++F++M  +    D   Y  +IR L +  K
Sbjct: 333 CTPDVVTYTSLIDGL----GKEKRSFE-AYKLFKEMALRGLALDTVCYTALIRELLQTGK 387

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             +A          G +P  +T + +I  L   G+I  A+ +   M      P+   Y  
Sbjct: 388 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSA 447

Query: 446 LITKLDQLEK 455
           LI  L +  K
Sbjct: 448 LIHGLCKARK 457



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 135/255 (52%), Gaps = 5/255 (1%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +++EA+ +++++   GC P I TYN LL GLC +GR+EEA ++L  + ++G  PDV TYT
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           +++DG  K  RS EA +L  E   RG+  + V +  L     + G   +   + K M   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
            C+PD ++ ST+++GL K G+I  AV IFK M   G   +E + ++L+ GLC     +  
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC-----KAR 175

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            ++ A ++  +M K     D  TY ++I  L K    + A       +E G  P   T+N
Sbjct: 176 KMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYN 235

Query: 410 NVIQALCGEGKIDKA 424
            +I   C  G  D A
Sbjct: 236 ILISGFCKAGNTDAA 250



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 186/410 (45%), Gaps = 8/410 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E + + + I  +G   +++ +N LL  L  +   E A+    +    G  P+  T++ 
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I     +   FEA K+   M   G   +   +T L+  L ++G++ +A  V   M   G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P++ T + ++ GL   GR+  A  +  +++  GL P+   Y+A++ G CK  + + A+
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+L +  +   TP+ +T+N L +G CK G           M +  C PD  +Y+ L++G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 306 LKWGKIRPAV-SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD-LLEDAYQVFEKMTK 363
            K G    A  S+ +E    G  +D     +++       W  K+  +E+A  + EK+T 
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIV------DWLAKNKKIEEAVALMEKITA 295

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
                   TY  ++  L K  + +EA+  L   ++ G  P  +T+ ++I  L  E +  +
Sbjct: 296 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE 355

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A  L   M           Y  LI +L Q  K   A ++Y      G +P
Sbjct: 356 AYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVP 405



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 172/410 (41%), Gaps = 76/410 (18%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +   +++   +KK         +N L+  L    + E A  FF E    G  P+ +
Sbjct: 173 KARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 232

Query: 122 TFSIMIRCYCNKND------------------------------------FFEARKVIDC 145
           T++I+I  +C   +                                      EA  +++ 
Sbjct: 233 TYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEK 292

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL----- 200
           +  NG  P + T+  L+N LCK GRL+EA+++L ++   GC P++ TY  L+ GL     
Sbjct: 293 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 352

Query: 201 ---------------------CYV---------GRVEEAYEMLMNVKNDGLKPDVYTYTA 230
                                CY          G++ +A  +   + + G  PDV T + 
Sbjct: 353 SFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLST 412

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++DG  K GR   A+ +      RG+ PN V ++ L +G CK       + +L  MKK  
Sbjct: 413 MIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 472

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C PD I+Y+ L++GL K G +  A + F EM+  G + D    N L+ G C     +   
Sbjct: 473 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDA-- 530

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
              A  VF+ M+      +  TYG +I  L K ++  +A ++  H  E G
Sbjct: 531 ---ACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 42/79 (53%)

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           K +EA+  +      G  P   T+N ++  LC  G++++A+ LL  + ++   P   +Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 445 MLITKLDQLEKSYDACALY 463
            LI  L + ++S++A  L+
Sbjct: 61  SLIDGLGKEKRSFEAYKLF 79


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 209/435 (48%), Gaps = 37/435 (8%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  +   G + +V  F  ++ AL M NE ++A     + + +G  PNS  +  +I   
Sbjct: 204 NVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHAL 263

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             KN   EA K+++ MF  G  P+V TF  +++ LCK  ++ +A +++D+M   G  P+ 
Sbjct: 264 SQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDN 323

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVK--------------------------------N 218
            TY  LL GLC +G++ EA ++L+ +                                 N
Sbjct: 324 MTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMIN 383

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            G +PD++TY  +M G CK G  + A +L+NE   RG  PNV+T+  L NG CK G   +
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEE 443

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              +L  M  R    + + Y+ L+  L +  K+  A+++  EM   G + D    NSL+ 
Sbjct: 444 AGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIY 503

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           GLC     + D +++A+++F  M    +V +  TY  +I  L +     +AL  ++  + 
Sbjct: 504 GLC-----KVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G     IT+N +I+A C  G I+K L L   M          S +++I  L ++ K  +
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDN 618

Query: 459 ACALYGAALKQGVIP 473
           A      A+ +G +P
Sbjct: 619 AFEFLRDAINRGFVP 633



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 180/364 (49%), Gaps = 6/364 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEAS-SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
            N L+   VM  + + A  F +E   ++G  P+ +T++I++   C +     AR +++ M
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
              G  PNV T+ ILVN LCK+G L+EA  VL +M   G   N   YNCL+  LC   +V
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
             A  +L  +   G KPD++TY +++ G CKV R +EA  L +  +  G   N VT+NTL
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +   + G   K + L+  M  R C  DKI+Y+ L+    K G I   + ++++M+  G 
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             D    N ++ GLC     +   +++A++       +  V D  TY  V+  L K  + 
Sbjct: 597 GADTISCNIMINGLC-----KVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            EAL         G  P   T+N  I   C EG ++ A    +   E+  +PS  ++++L
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVL 711

Query: 447 ITKL 450
           +  L
Sbjct: 712 VYTL 715



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 199/420 (47%), Gaps = 37/420 (8%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +   ++ +L  LV  N  + A   F +  S G++P  +TF I+++  C  N+   A  ++
Sbjct: 182 TFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLL 241

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M  +G  PN   +  L+++L +  ++ EAL++L++M  +GC P++QT+N ++ GLC V
Sbjct: 242 RDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKV 301

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL---------------- 247
            ++ +A +++  +   G  PD  TY  ++ G C++G+ NEA ++                
Sbjct: 302 NKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLI 361

Query: 248 ---------------LNEA-IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
                          LNE  I  G  P++ T+N L +G CKEG+      L+  M +R C
Sbjct: 362 NGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGC 421

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P+ I+Y+ L+NGL K G +  A  +  EM   G  ++  + N L+  LC      K+ +
Sbjct: 422 EPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC-----RKEKV 476

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
             A  +  +M  K    D  TY  +I  L K  + DEA    H+ +  G +   +T+N +
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I AL   G   KAL L+  M        + +Y+ LI    ++        LY   +  G+
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 143/290 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+E   +   +   G   +   +N L+ AL    +   A+   SE  + G  P+ +
Sbjct: 437 KAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLF 496

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C  +   EA ++   M  +G   N  T+  L+++L + G  ++AL +++ M
Sbjct: 497 TYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDM 556

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +  TYN L+K  C VG +E+  E+   +  DGL  D  +   +++G CKVG+ 
Sbjct: 557 LFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKV 616

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A E L +AI RG  P++VT+N++ NG CK G   + + L   ++     PD  +Y+T 
Sbjct: 617 DNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTF 676

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
           ++   K G +  A S F   +  GF       N L+  L  +S +E +  
Sbjct: 677 ISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFF 726



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/345 (21%), Positives = 134/345 (38%), Gaps = 74/345 (21%)

Query: 175 LEVLDQMG-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           LE+ +++G + G       Y   +  L  +G+ +   ++LM +K +G+      +  +M 
Sbjct: 96  LEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMK 155

Query: 234 GFCKVGRSNEAMELL------------------------------------NEAIERGVT 257
            + K G+  +A+ LL                                     + + +GV+
Sbjct: 156 HYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVS 215

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P V TF  +    C          LL+ M K  C+P+ I Y TL++ L +  ++  A+ +
Sbjct: 216 PTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKL 275

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
            +EM   G   D +  N ++ GLC     + + + DA ++ ++M  +    D  TYG ++
Sbjct: 276 LEEMFVMGCMPDVQTFNDVIHGLC-----KVNKIHDATKLVDRMLLRGFYPDNMTYGFLL 330

Query: 378 RTLGKGKKTDEA---LIHL-----------------------------HHAIEMGHIPRT 405
             L +  K +EA   LI +                                I  G  P  
Sbjct: 331 HGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDI 390

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            T+N ++  LC EG +  A  L+  M      P+  +Y +L+  L
Sbjct: 391 FTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGL 435



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 8/178 (4%)

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y   +N L   GK +    +  +M   G    E +       + MK + +      A ++
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFM-----IIMKHYGKAGQPGQAIRL 169

Query: 358 FEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
              M + V + +P   +Y +V+  L  G     A    +  +  G  P   TF  V++AL
Sbjct: 170 LLDM-RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKAL 228

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           C   ++D A  LL  M +H  +P+   Y  LI  L Q  +  +A  L       G +P
Sbjct: 229 CMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMP 286


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 221/488 (45%), Gaps = 44/488 (9%)

Query: 22  KIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGT 81
           K   F +L + +A +L   ++L+            F +  K   LKE +++   ++  G 
Sbjct: 129 KFRHFMRLYIVSATALIGNKNLERANEVMQCMVMNFAENGK---LKEAVNMVVEMQNQGL 185

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
             S    N +L   V +   E A   F E    G++P+  +F +M+   CN     EA K
Sbjct: 186 VXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEK 245

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
            ++ M + G+  +  T T+++++ C+ G +   +    +M  +G  PN+  +  L+ GLC
Sbjct: 246 WLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLC 305

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-GVTPNV 260
             G +++A+E+L  +   G KP+VYT+T ++DG CK G + +A  L  + +   G  PNV
Sbjct: 306 KQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNV 365

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            T+  + NGYCKE    +   LL  M+++  +P+  +Y+TL++G  K G    A  +   
Sbjct: 366 HTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDL 425

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV----------------------- 357
           M + GF  +    N+++ GLC     +K  L++AY++                       
Sbjct: 426 MGKEGFSPNIYTYNAIIDGLC-----KKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVH 480

Query: 358 ------------FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                       F KM K     D  +Y  +I    + K+  E+      A+ +G IP  
Sbjct: 481 CRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTK 540

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
            T+ ++I   C  G    A+ L   M  H   P   +Y  LI+ L +  K  DA  LY A
Sbjct: 541 KTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDA 600

Query: 466 ALKQGVIP 473
            + +G+ P
Sbjct: 601 MMDKGLSP 608



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 180/369 (48%), Gaps = 11/369 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNS 120
           K   +K+  ++ + + + G   +V     L+  L      E A + F +   S G  PN 
Sbjct: 306 KQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNV 365

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ MI  YC ++    A  ++  M + G  PN  T+T L++  CK G    A E++D 
Sbjct: 366 HTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDL 425

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           MG+ G  PNI TYN ++ GLC  G ++EAY +L  V   GL+ D  TYT +M   C+   
Sbjct: 426 MGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQAD 485

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           +N ++   N+ ++ G TP++ ++ TL + +C++    +   L +       +P K +Y++
Sbjct: 486 TNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTS 545

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++ G  ++G    AV +F+ M   G   D     +L+ GLC +S      L+DA  +++ 
Sbjct: 546 MICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKES-----KLDDARNLYDA 600

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEAL-IHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           M  K     P     +       KK D +  I++   +E     RT+  N +++ LC EG
Sbjct: 601 MMDK--GLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV--NTLVRKLCSEG 656

Query: 420 KIDKALLLL 428
           K+D A L  
Sbjct: 657 KLDMAALFF 665


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 180/363 (49%), Gaps = 24/363 (6%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+    I D I KDG                     E A    S   SYGL PN   ++ 
Sbjct: 258 LRMYATIIDGICKDG-------------------HHEVANDILSRMPSYGLKPNVVCYNT 298

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C+   + EA  ++  MF      +  TF ILV+  C++G +   +E+L+QM   G
Sbjct: 299 VLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 358

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P++ TY  ++ G C  G V+EA  +L N+   G KP+  +YT V+ G C+  R  +A 
Sbjct: 359 CIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQ 418

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           EL++  I++G  PN VTFNTL N  CK+G   + + LLK M    C PD ISYST+++GL
Sbjct: 419 ELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGL 478

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GK   A+ +   M+  G   +  + +S+   L  +   +K +     Q+F+ +    
Sbjct: 479 GKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKII-----QMFDSIQDAT 533

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
             +D   Y  VI +L K  +TD A+    + +  G +P   T+  +I+ L  EG + +A 
Sbjct: 534 VRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ 593

Query: 426 LLL 428
            LL
Sbjct: 594 DLL 596



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 206/423 (48%), Gaps = 17/423 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +    +  +     +   G      + N ++ A+      +  V+   +  S+G  P+  
Sbjct: 155 RGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIV 214

Query: 122 TFSIMIRCYCNKN----------DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           +++ +++  C             +     + +  M ++G  P++  +  +++ +CK G  
Sbjct: 215 SYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHH 274

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
           + A ++L +M   G KPN+  YN +LKGLC   R EEA ++L  +  +    D  T+  +
Sbjct: 275 EVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNIL 334

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           +D FC+ G  +  +ELL + +E G  P+V+T+ T+ NG+CKEG   + V LLK M    C
Sbjct: 335 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 394

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P+ ISY+ +L GL +  +   A  +   M++ G   +    N+L+  +C     +K L 
Sbjct: 395 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMC-----KKGLA 449

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           E A ++ ++M       D  +Y  VI  LGK  KT+EAL  L+  I  G  P TI ++++
Sbjct: 450 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSM 509

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTS-YDMLITKLDQLEKSYDACALYGAALKQG 470
             AL  EG+ DK ++ +F   + A + S  + Y+ +I+ L +  ++  A   +   +  G
Sbjct: 510 ASALSREGRTDK-IIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNG 568

Query: 471 VIP 473
            +P
Sbjct: 569 CMP 571



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 182/380 (47%), Gaps = 15/380 (3%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+    E    G A       +++   C    F  A + +  +   G   +     ++V+
Sbjct: 127 ALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVS 186

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR---VEE-------AYEML 213
           ++C+ G + E +E+L ++   GC+P+I +YN +LKGLC   R   VEE        +E L
Sbjct: 187 AICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEAL 246

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +   G  PD+  Y  ++DG CK G    A ++L+     G+ PNVV +NT+  G C  
Sbjct: 247 SQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSA 306

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
               +   LL  M + +C  D ++++ L++   + G +   + + ++M+  G   D    
Sbjct: 307 ERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITY 366

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            +++ G C     ++ L+++A  + + M+      +  +Y IV++ L + ++  +A   +
Sbjct: 367 TTVINGFC-----KEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELI 421

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
            H I+ G +P  +TFN +I  +C +G  ++A+ LL  M  +   P   SY  +I  L + 
Sbjct: 422 SHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 481

Query: 454 EKSYDACALYGAALKQGVIP 473
            K+ +A  L    + +G+ P
Sbjct: 482 GKTEEALELLNVMINKGITP 501



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 132/265 (49%), Gaps = 8/265 (3%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            VDR+        I++ + + + G    V  +  ++         + AV      S+ G 
Sbjct: 343 LVDRV--------IELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 394

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            PN+ +++I+++  C    + +A+++I  M   G  PN  TF  L+N +CK G  ++A+E
Sbjct: 395 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIE 454

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +L QM   GC P++ +Y+ ++ GL   G+ EEA E+L  + N G+ P+   Y+++     
Sbjct: 455 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 514

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + GR+++ +++ +   +  V  +   +N + +  CK     + +     M    C+P++ 
Sbjct: 515 REGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 574

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEM 321
           +Y+ L+ GL   G +R A  +  E+
Sbjct: 575 TYTILIRGLASEGLVREAQDLLSEL 599



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 142/321 (44%), Gaps = 11/321 (3%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
            + L+ SLC +GR  +A   LD  G       +  YN ++ G C  G+V  A  +   V 
Sbjct: 47  LSALIRSLCAAGRTADAARALDTAGDAA---GVVAYNAMIAGYCRAGQVAAARRLAAAVP 103

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
              + P+ YTY  ++   C  G   +A+ +L+E   RG        + +    C+ G   
Sbjct: 104 ---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
             V  L+++  + C  D  + + +++ + + G +   V + +++  FG E D    N++L
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 338 RGLCM-KSWEE-KDLLEDAYQVFE---KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
           +GLCM K W++ ++L+ +  +V E   +M +     D   Y  +I  + K    + A   
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDI 280

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L      G  P  + +N V++ LC   + ++A  LL  M++        ++++L+    Q
Sbjct: 281 LSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQ 340

Query: 453 LEKSYDACALYGAALKQGVIP 473
                    L    L+ G IP
Sbjct: 341 NGLVDRVIELLEQMLEHGCIP 361



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 102/224 (45%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +  ++   G   +   +  +L  L        A +  S     G  PN  TF+ 
Sbjct: 379 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNT 438

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C K    +A +++  M  NG  P++ +++ +++ L K+G+ +EALE+L+ M   G
Sbjct: 439 LINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKG 498

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN   Y+ +   L   GR ++  +M  ++++  ++ D   Y AV+   CK   ++ A+
Sbjct: 499 ITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAI 558

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           +     +  G  PN  T+  L  G   EG   +   LL  +  R
Sbjct: 559 DFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 602


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 209/435 (48%), Gaps = 37/435 (8%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  +   G + +V  F  ++ AL M NE ++A     + + +G  PNS  +  +I   
Sbjct: 204 NVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHAL 263

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             KN   EA K+++ MF  G  P+V TF  +++ LCK  ++ +A +++D+M   G  P+ 
Sbjct: 264 SQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDN 323

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVK--------------------------------N 218
            TY  LL GLC +G++ EA ++L+ +                                 N
Sbjct: 324 MTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMIN 383

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            G +PD++TY  +M G CK G  + A +L+NE   RG  PNV+T+  L NG CK G   +
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEE 443

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              +L  M  R    + + Y+ L+  L +  K+  A+++  EM   G + D    NSL+ 
Sbjct: 444 AGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIY 503

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           GLC     + D +++A+++F  M    +V +  TY  +I  L +     +AL  ++  + 
Sbjct: 504 GLC-----KVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G     IT+N +I+A C  G I+K L L   M          S +++I  L ++ K  +
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDN 618

Query: 459 ACALYGAALKQGVIP 473
           A      A+ +G +P
Sbjct: 619 AFEFLRDAINRGFVP 633



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 181/364 (49%), Gaps = 6/364 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEAS-SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
            N L+   VM  + + A  F +E   ++G  P+ +T++I++   C +     AR +++ M
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
              G  PNV T+ ILVN LCK+G L+EA  VL +M   G   N   YNCL+  LC   +V
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
             A  +L  +   G KPD++TY +++ G CKV R +EA  L +  +  G   N VT+NTL
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +   + G   K + L+  M  R C  DKI+Y+ L+    K G I   + ++++M+  G 
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             D    N ++ GLC     +   +++A++       +  V D  TY  V+  L K  + 
Sbjct: 597 GADTISCNIMINGLC-----KVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            EAL         G  P   T+N  I   C EG ++ A L  +   E+  +PS  ++++L
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVL 711

Query: 447 ITKL 450
           +  L
Sbjct: 712 VYTL 715



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 199/420 (47%), Gaps = 37/420 (8%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +   ++ +L  LV  N  + A   F +  S G++P  +TF I+++  C  N+   A  ++
Sbjct: 182 TFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLL 241

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M  +G  PN   +  L+++L +  ++ EAL++L++M  +GC P++QT+N ++ GLC V
Sbjct: 242 RDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKV 301

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL---------------- 247
            ++ +A +++  +   G  PD  TY  ++ G C++G+ NEA ++                
Sbjct: 302 NKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLI 361

Query: 248 ---------------LNEA-IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
                          LNE  I  G  P++ T+N L +G CKEG+      L+  M +R C
Sbjct: 362 NGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGC 421

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P+ I+Y+ L+NGL K G +  A  +  EM   G  ++  + N L+  LC      K+ +
Sbjct: 422 EPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC-----RKEKV 476

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
             A  +  +M  K    D  TY  +I  L K  + DEA    H+ +  G +   +T+N +
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I AL   G   KAL L+  M        + +Y+ LI    ++        LY   +  G+
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 199/419 (47%), Gaps = 12/419 (2%)

Query: 57  FVDRIKASPLKERID-IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS-Y 114
           F++++ A    + ID +   +K++G  +  S F  ++       +   A++   +  + Y
Sbjct: 118 FINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVY 177

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
              P   ++ +++      N    A  V   M   G  P V TF I++ +LC    +  A
Sbjct: 178 LCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSA 237

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
             +L  M + GC PN   Y  L+  L    +V EA ++L  +   G  PDV T+  V+ G
Sbjct: 238 CSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHG 297

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CKV + ++A +L++  + RG  P+ +T+  L +G C+ G   +     K++ K  C P+
Sbjct: 298 LCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA---RKILIKIPC-PN 353

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKE-MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
               +TL+NG +  G+++ A S   E M+ FGF+ D    N L+ GLC     ++  L  
Sbjct: 354 NAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLC-----KEGSLSF 408

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A  +  +M+++    +  TY I++  L K    +EA + LH     G    ++ +N +I 
Sbjct: 409 ARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLIC 468

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           ALC + K+  AL LL  M      P   +Y+ LI  L ++++  +A  L+   L  G +
Sbjct: 469 ALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAV 527



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 142/290 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+E   +   +   G   +   +N L+ AL    +   A+   SE  + G  P+ +
Sbjct: 437 KAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLF 496

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C  +   EA ++   M  +G   N  T+  L+++L + G  ++AL +++ M
Sbjct: 497 TYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDM 556

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +  TYN L+K  C VG +E+  E+   +  DGL  D  +   +++G CKVG+ 
Sbjct: 557 LFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKV 616

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A E L +AI RG  P++VT+N++ NG CK G   + + L   ++     PD  +Y+T 
Sbjct: 617 DNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTF 676

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
           ++   K G +  A   F   +  GF       N L+  L  +S +E +  
Sbjct: 677 ISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFF 726



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/345 (21%), Positives = 134/345 (38%), Gaps = 74/345 (21%)

Query: 175 LEVLDQMG-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           LE+ +++G + G       Y   +  L  +G+ +   ++LM +K +G+      +  +M 
Sbjct: 96  LEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMK 155

Query: 234 GFCKVGRSNEAMELL------------------------------------NEAIERGVT 257
            + K G+  +A+ LL                                     + + +GV+
Sbjct: 156 HYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVS 215

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P V TF  +    C          LL+ M K  C+P+ I Y TL++ L +  ++  A+ +
Sbjct: 216 PTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKL 275

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
            +EM   G   D +  N ++ GLC     + + + DA ++ ++M  +    D  TYG ++
Sbjct: 276 LEEMFVMGCMPDVQTFNDVIHGLC-----KVNKIHDATKLVDRMLLRGFYPDNMTYGFLL 330

Query: 378 RTLGKGKKTDEA---LIHL-----------------------------HHAIEMGHIPRT 405
             L +  K +EA   LI +                                I  G  P  
Sbjct: 331 HGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDI 390

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            T+N ++  LC EG +  A  L+  M      P+  +Y +L+  L
Sbjct: 391 FTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGL 435



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 8/178 (4%)

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y   +N L   GK +    +  +M   G    E +       + MK + +      A ++
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFM-----IIMKHYGKAGQPGQAIRL 169

Query: 358 FEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
              M + V + +P   +Y +V+  L  G     A    +  +  G  P   TF  V++AL
Sbjct: 170 LLDM-RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKAL 228

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           C   ++D A  LL  M +H  +P+   Y  LI  L Q  +  +A  L       G +P
Sbjct: 229 CMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMP 286


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 194/402 (48%), Gaps = 15/402 (3%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV +F  +L +LV L    T +  F +    G+ PN  + SI+I CYC+      A  + 
Sbjct: 70  SVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIF 129

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   GYHPN  T T LV   C + ++KEAL   D +  +G   N  +Y  L+ GLC +
Sbjct: 130 AKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKI 189

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A +ML  ++   +  DV  Y+ ++DG CK    N+A EL +E I + ++P VVT 
Sbjct: 190 GETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTL 249

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L  GYC  G   +  GLL+ M  +N  PD  +++ L++ L K GKI+ A S    M++
Sbjct: 250 NSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMK 309

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEK---------------DLLEDAYQVFEKMTKKVSVT 368
            G   D    +SL+ G C+ +   K                +++ A  +F +M  +    
Sbjct: 310 EGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAP 369

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  TY  +I  L K  +   A   +    + G     IT+N++I ALC    +DKA+ L+
Sbjct: 370 DTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALV 429

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
             + +        +Y++LI  L +  +  DA  ++   L +G
Sbjct: 430 KKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKG 471



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/287 (20%), Positives = 127/287 (44%), Gaps = 42/287 (14%)

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++  +  +L  L  +        +   ++ +G+KP++ + + +++ +C +G+   A  +
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             + ++ G  PN +T  TL  G+C      + +     +       +++SY TL+NGL K
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM-TKKVS 366
            G+ R A+ + +++       D  M ++++ GLC     +  L+ DAY+++ +M TK++S
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLC-----KDKLVNDAYELYSEMITKRIS 243

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                                               P  +T N++I   C  G+  +A  
Sbjct: 244 ------------------------------------PTVVTLNSLIYGYCIVGQFKEAFG 267

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LL  M      P   ++++L+  L +  K  +A +     +K+GV+P
Sbjct: 268 LLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMP 314


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 205/404 (50%), Gaps = 5/404 (1%)

Query: 68   ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
            E +D+F  +   G    V  ++ L+  L      + A++FF E    G++ + +T++ +I
Sbjct: 1103 EALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLI 1162

Query: 128  RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                    + E    ++ M D G+ P+  TFTIL++ LCK G++ EA ++L+ M   G +
Sbjct: 1163 HGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKE 1222

Query: 188  PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            P+I TYN L+ GLC VG++E+A ++  ++ + G+K +V++Y  +++G+CK  + +EA   
Sbjct: 1223 PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRF 1282

Query: 248  LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
              E   +G+ P+ VT+NTL    C+ G       L   M+         +Y  LL+GL K
Sbjct: 1283 FEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCK 1342

Query: 308  WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
             G +  A+ +F+ + +   + +  + + LL G+C         LE+A++ F++++K    
Sbjct: 1343 NGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMC-----RAGKLEEAWKQFDEISKNGLE 1397

Query: 368  TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
             D   Y I+I  L       EA+  L    E G +P +ITFN +IQ L  E +I +A+ L
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 1457

Query: 428  LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
            L  M      P      ML+       + + A      AL++GV
Sbjct: 1458 LEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 1501



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 154/287 (53%), Gaps = 3/287 (1%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K   + E   I + ++  G    +  +N L+  L ++ + E A K F   +  G+  N +
Sbjct: 1202 KEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF 1261

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +++I+I  YC      EA +  + M   G  P+  T+  L+ +LC+SGR++ A ++  +M
Sbjct: 1262 SYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM 1321

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               G    + TY  LL GLC  G +EEA ++  ++K    KP++  ++ ++DG C+ G+ 
Sbjct: 1322 QTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKL 1381

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             EA +  +E  + G+ P+ + +N L NG C +G   + V LL  M+++ CLPD I+++ +
Sbjct: 1382 EEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVI 1441

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
            +  LLK  +I  A+ + +EM    F  DE + + L   LC+ S++ +
Sbjct: 1442 IQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML---LCLASFDPQ 1485



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 189/383 (49%), Gaps = 6/383 (1%)

Query: 91   LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
            L+  + M N    AV+ F E +  GL  ++ T+ I+I   C       A K+ + M  N 
Sbjct: 1022 LVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGN- 1080

Query: 151  YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
               +V T+ +++++LCK G   EAL++  +M   G  P++  Y+ L+ GLC  GR++EA 
Sbjct: 1081 CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 1140

Query: 211  EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            E    ++  G+  DVYTY +++ G  + G   E    LN  ++RG +P+  TF  L +G 
Sbjct: 1141 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 1200

Query: 271  CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
            CKEG   +   +L+LM+ +   PD ++Y+TL+NGL   G++  A  +F+ +   G +++ 
Sbjct: 1201 CKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 1260

Query: 331  RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               N L+ G C     +   +++A++ FE+M  K       TY  +I  L +  +   A 
Sbjct: 1261 FSYNILINGYC-----KDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315

Query: 391  IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                     G   +  T+  ++  LC  G +++A+ L   + +    P+   + +L+  +
Sbjct: 1316 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGM 1375

Query: 451  DQLEKSYDACALYGAALKQGVIP 473
             +  K  +A   +    K G+ P
Sbjct: 1376 CRAGKLEEAWKQFDEISKNGLEP 1398



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 166/325 (51%), Gaps = 5/325 (1%)

Query: 66   LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            LKE ++ F  ++  G +  V  +N L+  L      +    F +     G +P+++TF+I
Sbjct: 1136 LKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTI 1195

Query: 126  MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +I   C +    EA+++++ M   G  P++ T+  L+N LC  G+L++A ++ + +   G
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255

Query: 186  CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             K N+ +YN L+ G C   +++EA+     ++  GLKP   TY  ++   C+ GR   A 
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315

Query: 246  ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +L  E    G    + T+  L +G CK G   + + L + +KK    P+   +S LL+G+
Sbjct: 1316 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGM 1375

Query: 306  LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
             + GK+  A   F E+ + G E D    N L+ GLC      K +L +A ++  +M +K 
Sbjct: 1376 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLC-----NKGMLSEAVKLLWQMEEKG 1430

Query: 366  SVTDPGTYGIVIRTLGKGKKTDEAL 390
             + D  T+ ++I+ L K  +  EA+
Sbjct: 1431 CLPDSITFNVIIQNLLKENEIHEAI 1455



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 146/319 (45%), Gaps = 6/319 (1%)

Query: 153  PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
            P   TF  L+ S+ K G       +  ++  +G +P++ T N L+   C +  V   + +
Sbjct: 944  PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003

Query: 213  LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
                   G +PD  T T ++ G        +A++L +E  ++G+  +  T+  L NG CK
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCK 1063

Query: 273  EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                   + L + MK  NC  D  +Y  +++ L K G    A+ +F EM+  G   D  +
Sbjct: 1064 ARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVV 1122

Query: 333  MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             +SL+ GLC         L++A + F++M  +    D  TY  +I  L +     E    
Sbjct: 1123 YSSLMDGLC-----RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWF 1177

Query: 393  LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            L+  ++ G  P   TF  +I  LC EGK+ +A  +L LM    K P   +Y+ L+  L  
Sbjct: 1178 LNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCL 1237

Query: 453  LEKSYDACALYGAALKQGV 471
            + +  DA  L+ +   +G+
Sbjct: 1238 VGQLEDATKLFESLADRGI 1256


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 200/392 (51%), Gaps = 11/392 (2%)

Query: 88  FNDLLMALVMLN------EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           F D++   VM++      + E A+       S GL P   T++ +++  C    + +A +
Sbjct: 188 FPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWE 247

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V   M D G  P+V +FTIL+   C+ G ++EAL++  +M   G KP++ +++CL+    
Sbjct: 248 VFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFA 307

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G+++ A   L  ++  GL PD   YT V+ GFC+ G  ++A+ + +E +  G  P+VV
Sbjct: 308 RRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVV 367

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+NTL NG CKE   +   GLL  M++R   PD  +++TL++G    GK+  A+ +F  M
Sbjct: 368 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 427

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +      D    N+L+ G+C      +  L+ A  +++ M  +    +  TY I+I +  
Sbjct: 428 LNQRLRPDIVTYNTLIDGMC-----RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 482

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           +  + ++A   L   I  G +P  +T+N++I+  C  G + K    L  M  +   P   
Sbjct: 483 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 542

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +Y+ LI    + +K +DA  L     K+ V P
Sbjct: 543 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 574



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 194/416 (46%), Gaps = 5/416 (1%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           R +A   +  + + DS+   G    +  +N +L  L      + A + F E   +G+AP+
Sbjct: 201 RFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPD 260

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             +F+I+I  +C   +  EA K+   M   G  P++ +F+ L+    + G++  A+  L 
Sbjct: 261 VRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLR 320

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M   G  P+   Y  ++ G C  G + +A  +   +   G  PDV TY  +++G CK  
Sbjct: 321 EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 380

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R  +A  LLNE  ERGV P++ TF TL +GYC EG   K + L   M  +   PD ++Y+
Sbjct: 381 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 440

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL++G+ + G +  A  ++ +M        E   N +   + + S  EK  +EDA+   +
Sbjct: 441 TLIDGMCRQGDLDKANDLWDDM-----HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 495

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M  K  + +  TY  +I+   +     +    L   +     P  IT+N +I     E 
Sbjct: 496 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 555

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           K+  A  LL +M +    P   +Y+MLI          +A  ++     +G+ P R
Sbjct: 556 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 611



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 183/355 (51%), Gaps = 5/355 (1%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N++T +IM+  YC   +F +   VI  M      P+V T  ++V++  ++G  + A+ ++
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D M   G KP I TYN +LKGLC  G  ++A+E+   + + G+ PDV ++T ++ GFC+V
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G   EA+++  E   RG+ P++V+F+ L   + + G     +  L+ M+    +PD + Y
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + ++ G  + G +  A+ +  EMV  G   D    N+LL GLC    +E+ LL DA  + 
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC----KERRLL-DAEGLL 389

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            +M ++    D  T+  +I       K D+AL      +     P  +T+N +I  +C +
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 449

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G +DKA  L   M+     P+  +Y +LI    +  +  DA       + +G++P
Sbjct: 450 GDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 504



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 154/303 (50%), Gaps = 5/303 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + + + + D +   G    V  +N LL  L        A    +E    G+ P+  
Sbjct: 343 RAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLC 402

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  YC +    +A ++ D M +    P++ T+  L++ +C+ G L +A ++ D M
Sbjct: 403 TFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM 462

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 PN  TY+ L+   C  G+VE+A+  L  + N G+ P++ TY +++ G+C+ G  
Sbjct: 463 HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 522

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++  + L + +   V+P+++T+NTL +GY KE        LL +M+K    PD ++Y+ L
Sbjct: 523 SKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 582

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG    G ++ A  IF++M   G E D     S++ G            ++A+Q+ ++M
Sbjct: 583 INGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS-----KEAFQLHDEM 637

Query: 362 TKK 364
            ++
Sbjct: 638 LQR 640



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 113/229 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + + +FD++        +  +N L+  +    + + A   + +  S  + PN  T+SI
Sbjct: 417 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 476

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C K    +A   +D M + G  PN+ T+  ++   C+SG + +  + L +M    
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ TYN L+ G     ++ +A+++L  ++ + ++PDV TY  +++GF   G   EA 
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 596

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            +  +   +G+ P+  T+ ++ NG+   G   +   L   M +R   PD
Sbjct: 597 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 225/482 (46%), Gaps = 28/482 (5%)

Query: 1   MSSLVPSNSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRS-LQAQRFVD 59
           M SL P      ++++   H+K   FN L      +LST   +  K+ P S +   R + 
Sbjct: 1   MLSLPPP---FLSSSHNTFHSKPLHFNTL----DEALSTFNRMLHKQPPPSTVDFNRLLT 53

Query: 60  RIKAS-------PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
            I  +        L  ++D F      G    V     ++ +L  LN  + A    ++  
Sbjct: 54  SIAKTKHHSTLLSLSRQMDSF------GIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 107

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
             G  P++ TF+ +IR  C +    EA  + D M   G+ PNV T+  L+N LCK  ++ 
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           EA  +  +M   G  PNI TYN L+ GLC +   +    ++  + +  + PDV+T   V+
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 227

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           D  CK G   EA ++++  I RGV PNVVT+N L +G+C        V +   M  ++C+
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 287

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            + ISY+TL+NG  K   +  A+ +F+EM R     +    N+L+ GLC         L+
Sbjct: 288 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC-----HVGRLQ 342

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNV 411
           DA  +F +M  +  + D  TY  +   L K +  D+A+  L  AIE  +  P    +  +
Sbjct: 343 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA-LLKAIEGSNWDPDIQIYTTI 401

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           +  +C  G+++ A  L   +      P+  +Y+++I  L +     +A  L+    K G 
Sbjct: 402 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGC 461

Query: 472 IP 473
            P
Sbjct: 462 SP 463



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 145/282 (51%), Gaps = 5/282 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G +  +  +N L+ AL  L E +      +E  +  + PN   FS ++   C +     A
Sbjct: 668 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 727

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             V+D M   G  P+V T+T L++  C    + EA++V D M   GC PN+++YN L+ G
Sbjct: 728 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 787

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C + R+++A  +L  +   GL  D  TY  ++ G C VGR   A+ L +E +  G  P+
Sbjct: 788 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 847

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           +VT+  L +  CK     + + LLK ++  N   D + Y+  ++G+ + G++  A  +F 
Sbjct: 848 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS 907

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            +   G + D R  N ++ GLC     ++ LL++A ++F KM
Sbjct: 908 NLSSKGLQPDVRTYNIMIHGLC-----KRGLLDEANKLFRKM 944



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 156/317 (49%), Gaps = 5/317 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  +IF  +   G + ++  +N L+  L  L E +      +E     + P+ +
Sbjct: 162 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVF 221

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T + ++   C +    EA  V+D M   G  PNV T+  L++  C    +  A++V D M
Sbjct: 222 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 281

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C  N+ +YN L+ G C +  V++A  +   +    L P+  TY  ++ G C VGR 
Sbjct: 282 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 341

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L +E + RG  P++VT+ TL +  CK     K + LLK ++  N  PD   Y+T+
Sbjct: 342 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTI 401

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+G+ + G++  A  +F  +   G + +    N ++ GLC     ++ LL +A ++F +M
Sbjct: 402 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC-----KQGLLAEASKLFSEM 456

Query: 362 TKKVSVTDPGTYGIVIR 378
            K     +  TY ++ R
Sbjct: 457 NKNGCSPNDCTYNLITR 473



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 173/363 (47%), Gaps = 27/363 (7%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S  DF  LL ++  +    T +   ++  S+G+ P+ +T +I+I  +C+      A  V+
Sbjct: 580 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 639

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKS----------------------GRLKEALEVLDQM 181
             +   G+ P+V T+  L+N LCK                          K    +L++M
Sbjct: 640 AKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEM 699

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 PN+  ++ ++  LC  G +  A++++  +   G++PDV TYTA+MDG C     
Sbjct: 700 VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 759

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA+++ +  + +G  PNV ++N L NGYC+     K +GLL+ M  +  + D ++Y+TL
Sbjct: 760 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 819

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL   G+++ A+++F EMV  G   D      LL  LC     +   L +A  + + +
Sbjct: 820 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLC-----KNHHLAEAMVLLKAI 874

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  D   Y I I  + +  + + A     +    G  P   T+N +I  LC  G +
Sbjct: 875 EGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLL 934

Query: 422 DKA 424
           D+A
Sbjct: 935 DEA 937



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 149/305 (48%), Gaps = 21/305 (6%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P+   FT L+ S+ K       L +  QM   G  P++ T N L+   C++ R+  A+ +
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +PDV TY  +M+G CK+             I +G++P++ T+N+L +  C 
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLCKM-------------ITKGISPDIFTYNSLIHALCN 685

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                    LL  M     +P+ + +ST+++ L K G I  A  +   M++ G E D   
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 745

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             +L+ G C++S      +++A +VF+ M  K  V +  +Y I+I    + ++ D+A+  
Sbjct: 746 YTALMDGHCLRSE-----MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 800

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L      G I  T+T+N +I  LC  G++  A+ L   M    +IP   +Y +L   LD 
Sbjct: 801 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL---LDY 857

Query: 453 LEKSY 457
           L K++
Sbjct: 858 LCKNH 862



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 99/204 (48%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+ D + K G    V  +  L+    + +E + AVK F      G  PN  +++I+I  Y
Sbjct: 729 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 788

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A  +++ M   G   +  T+  L++ LC  GRL+ A+ +  +M   G  P++
Sbjct: 789 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDL 848

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  LL  LC    + EA  +L  ++   L  D+  Y   +DG C+ G    A +L + 
Sbjct: 849 VTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSN 908

Query: 251 AIERGVTPNVVTFNTLFNGYCKEG 274
              +G+ P+V T+N + +G CK G
Sbjct: 909 LSSKGLQPDVRTYNIMIHGLCKRG 932



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 98/196 (50%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E + +FD++   G   +V  +N L+     +   + A+    + S  GL  ++ T+
Sbjct: 757 SEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTY 816

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +I   C+      A  +   M  +G  P++ T+ IL++ LCK+  L EA+ +L  +  
Sbjct: 817 NTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEG 876

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
                +I  YN  + G+C  G +E A ++  N+ + GL+PDV TY  ++ G CK G  +E
Sbjct: 877 SNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDE 936

Query: 244 AMELLNEAIERGVTPN 259
           A +L  +  E  +  N
Sbjct: 937 ANKLFRKMDENDIWSN 952



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 43/96 (44%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E + +  +I+    +  +  +N  +  +    E E A   FS  SS GL P+  
Sbjct: 860 KNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVR 919

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           T++IMI   C +    EA K+   M +N    N T+
Sbjct: 920 TYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTS 955


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 196/389 (50%), Gaps = 5/389 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  + +   + +V  +N L+    +    + A++FF      G  PN  T++ +I  Y
Sbjct: 191 NVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGY 250

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +  +++  M   G  PN+ ++ +++N LC+ GR+KE   VL +M + G   + 
Sbjct: 251 CKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDE 310

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L+KG C  G   +A  M   +   GL P V TYT+++   CK G  N A E L++
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQ 370

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
              RG+ PN  T+ TL +G+ ++G   +   +LK M      P  ++Y+ L+NG    GK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGK 430

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A+++ ++M   G   D    +++L G C +S++    +++A +V  KM  K    D 
Sbjct: 431 MVDAIAVLEDMKEKGLTPDVVSYSTVLSGFC-RSYD----VDEALRVKRKMVAKGIKPDT 485

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I+   + ++T EA       + +G  P   T+  +I A C EG + KA+ L   
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNE 545

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           M E   +P   +Y +LI  L++  ++ +A
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQARTREA 574



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 183/361 (50%), Gaps = 20/361 (5%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           + G + SV  +  L+ ++        A +F  +    GL PN  T++ ++  +  K    
Sbjct: 338 RHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA +V+  M DNG+ P+V T+  L+N  C +G++ +A+ VL+ M   G  P++ +Y+ +L
Sbjct: 398 EAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVL 457

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G C    V+EA  +   +   G+KPD  TY++++ GFC+  R+ EA +L +E +  G+ 
Sbjct: 458 SGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLP 517

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR----- 312
           P+  T+  L N YC EG   K + L   M ++  LPD ++YS L+NGL K  + R     
Sbjct: 518 PDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRL 577

Query: 313 ----------PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
                     P+   +  ++     ++ + + SL++G CMK      ++ +A QVFE M 
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG-----MMTEADQVFESML 632

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +K    D   Y ++I    +G    +A       ++ G +  T+T   +++ L  EGK++
Sbjct: 633 EKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVN 692

Query: 423 K 423
           +
Sbjct: 693 E 693



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 197/393 (50%), Gaps = 7/393 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L   +  FD ++K G   +V  +N L+     L + +   +     +  GL PN  +
Sbjct: 218 AGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLIS 277

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++++I   C +    E   V+  M   GY  +  T+  L+   CK G   +AL +  +M 
Sbjct: 278 YNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           R G  P++ TY  L+  +C  G +  A E L  ++  GL P+  TYT ++DGF + G  N
Sbjct: 338 RHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA  +L E I+ G +P+VVT+N L NG+C  G  +  + +L+ MK++   PD +SYST+L
Sbjct: 398 EAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVL 457

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +G  +   +  A+ + ++MV  G + D    +SL++G C     E+   ++A  +F++M 
Sbjct: 458 SGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFC-----EQRRTKEACDLFDEML 512

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA-IEMGHIPRTITFNNVIQALCGEGKI 421
           +     D  TY  +I          +A I LH+  +E G +P  +T++ +I  L  + + 
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLQKA-IQLHNEMVEKGVLPDVVTYSVLINGLNKQART 571

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
            +A  LL  ++    +PS  +Y  LI     +E
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 199/383 (51%), Gaps = 26/383 (6%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            +E +  G + +  T++ +I+ YC + +F +A  +   M  +G  P+V T+T L++S+CK
Sbjct: 298 LTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCK 357

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G +  A E LDQM   G  PN +TY  L+ G    G + EAY +L  + ++G  P V T
Sbjct: 358 AGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVT 417

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y A+++G C  G+  +A+ +L +  E+G+TP+VV+++T+ +G+C+     + + + + M 
Sbjct: 418 YNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMV 477

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            +   PD I+YS+L+ G  +  + + A  +F EM+R G   DE    +L+   CM    E
Sbjct: 478 AKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCM----E 533

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
            D L+ A Q+  +M +K  + D  TY ++I  L K  +T EA   L        +P  +T
Sbjct: 534 GD-LQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVT 592

Query: 408 FNNVIQ---------------ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TK 449
           ++ +I+                 C +G + +A  +   M E    P  T+Y+++I    +
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCR 652

Query: 450 LDQLEKSYDACALYGAALKQGVI 472
              + K+Y   +LY   +K G +
Sbjct: 653 GGDIRKAY---SLYKEMVKSGFL 672



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 180/370 (48%), Gaps = 5/370 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F E     ++PN +T++I+IR +C   +   A +  D M   G  PNV T+  L++
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID 248

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             CK  ++ +  E+L  M   G +PN+ +YN ++ GLC  GR++E   +L  +   G   
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSL 308

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D  TY  ++ G+CK G  ++A+ +  E +  G++P+V+T+ +L +  CK G   +    L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFL 368

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M+ R   P++ +Y+TL++G  + G +  A  + KEM+  GF       N+L+ G C+ 
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIA 428

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                  + DA  V E M +K    D  +Y  V+    +    DEAL      +  G  P
Sbjct: 429 GK-----MVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKP 483

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            TIT++++IQ  C + +  +A  L   M      P   +Y  LI           A  L+
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLH 543

Query: 464 GAALKQGVIP 473
              +++GV+P
Sbjct: 544 NEMVEKGVLP 553



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 205/425 (48%), Gaps = 10/425 (2%)

Query: 54  AQRFVDRIKASPLKERID--IFDSIKK--DGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           AQ   + + A  L +     +F S+++  D  N + S F+ ++ +   L   + A+    
Sbjct: 99  AQTLAEDVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVH 158

Query: 110 EASSYGLAPNSWTFSIMIRCYC-NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS 168
            + ++G  P   +++ ++     +K +   A  V   M  +   PNV T+ IL+   C +
Sbjct: 159 LSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLA 218

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G L  AL   D+M + GC PN+ TYN L+ G C + ++++ +E+L ++   GL+P++ +Y
Sbjct: 219 GNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISY 278

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
             V++G C+ GR  E   +L E  +RG + + VT+NTL  GYCKEG   + + +   M +
Sbjct: 279 NVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
               P  I+Y++L++ + K G +  A     +M   G   +ER   +L+ G   K +   
Sbjct: 339 HGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGY--- 395

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             + +AY+V ++M          TY  +I       K  +A+  L    E G  P  +++
Sbjct: 396 --MNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSY 453

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           + V+   C    +D+AL +   M      P   +Y  LI    +  ++ +AC L+   L+
Sbjct: 454 STVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLR 513

Query: 469 QGVIP 473
            G+ P
Sbjct: 514 VGLPP 518



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 130/276 (47%), Gaps = 15/276 (5%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + + I + + +K+ G    V  ++ +L       + + A++   +  + G+ P++ T
Sbjct: 428 AGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTIT 487

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           +S +I+ +C +    EA  + D M   G  P+  T+T L+N+ C  G L++A+++ ++M 
Sbjct: 488 YSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMV 547

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY-------------- 228
             G  P++ TY+ L+ GL    R  EA  +L+ +  +   P   TY              
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607

Query: 229 -TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
             +++ GFC  G   EA ++    +E+   P+   +N + +G+C+ G   K   L K M 
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMV 667

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           K   L   ++   L+  L K GK+    S+   ++R
Sbjct: 668 KSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLR 703


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 199/425 (46%), Gaps = 40/425 (9%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV +FN +L ++V +    TA+    +    G+ P+  T SI+I CYC+      A  V+
Sbjct: 77  SVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVL 136

Query: 144 DCMFDNGYHPNVTTFT-----------------------------------ILVNSLCKS 168
             +   GY  N  T T                                    L+N LCK 
Sbjct: 137 GMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKI 196

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G  +EA E+L +M     +PN+  YN ++ GLC  G V EA ++  +V   G+ PDV+TY
Sbjct: 197 GLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTY 256

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           T ++ GFC +G+  E   LL + ++R V  NV T+N L +  CK+G   K   +  LM +
Sbjct: 257 TCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIE 316

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           R   PD ++++TL++G   +  +  A  +F      G   D    N L+ G C     + 
Sbjct: 317 RGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYC-----KN 371

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
           + +++A  +F KM  K    +  TY  +I  L K  +   A        + G  P  IT+
Sbjct: 372 NRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITY 431

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           N ++ ALC    +DKA+ L  LM+E    P+ +SY++LI    + ++  +A  L+    +
Sbjct: 432 NIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHR 491

Query: 469 QGVIP 473
           + ++P
Sbjct: 492 RNLVP 496



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 142/260 (54%), Gaps = 6/260 (2%)

Query: 81  TNWSVSDFNDLLMALV---MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
            N +V  +N L+ AL    ML +         E    G  P+  TF+ ++  YC  ND  
Sbjct: 284 VNLNVYTYNILIDALCKKGMLGKAHDMRNLMIER---GQRPDLVTFNTLMSGYCLYNDVV 340

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EARK+ D   + G  P+V ++ IL+   CK+ R+ EAL + ++M      PNI TY+ L+
Sbjct: 341 EARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLI 400

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            GLC  GR+  A+E+   + + G  P+V TY  ++D  CK+   ++A+EL N   ERG+T
Sbjct: 401 DGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLT 460

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PNV ++N L NGYCK     + + L + M +RN +PD ++Y+ L++GL K G+I  A  +
Sbjct: 461 PNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWEL 520

Query: 318 FKEMVRFGFEVDERMMNSLL 337
           F  M   G  VD    N L 
Sbjct: 521 FNVMHDGGPPVDVITYNILF 540



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 182/389 (46%), Gaps = 5/389 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ ++  DS+   G       +  L+  L  +     A +   +     + PN   +++
Sbjct: 164 VRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNM 223

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C      EAR +   +   G  P+V T+T L++  C  G+ +E   +L  M    
Sbjct: 224 IVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN 283

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              N+ TYN L+  LC  G + +A++M   +   G +PD+ T+  +M G+C      EA 
Sbjct: 284 VNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEAR 343

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L +   E G+TP+V ++N L  GYCK     + + L   M  +   P+ ++YS+L++GL
Sbjct: 344 KLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGL 403

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I  A  +F  +   G   +    N +L  LC     +  L++ A ++F  M ++ 
Sbjct: 404 CKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALC-----KIQLVDKAIELFNLMFERG 458

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  +Y I+I    K K+ DEA+           +P ++T+N +I  LC  G+I  A 
Sbjct: 459 LTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAW 518

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
            L  +M++        +Y++L     +++
Sbjct: 519 ELFNVMHDGGPPVDVITYNILFDAFSKIQ 547



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 177/403 (43%), Gaps = 30/403 (7%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + AV  F+   +    P+   F++++        +  A  +   M   G  P++ T +IL
Sbjct: 60  DDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSIL 119

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +N  C  G +  A  VL  + + G + N  T   ++KGLC  G V +A E   +V   G 
Sbjct: 120 INCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGF 179

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
             D  TY  +++G CK+G + EA ELL++   + V PNVV +N + +G CK+G   +   
Sbjct: 180 LLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARD 239

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L   +  R   PD  +Y+ L++G    G+ R    +  +MV     ++    N L+  LC
Sbjct: 240 LYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALC 299

Query: 342 MKSW---------------EEKDLLE---------------DAYQVFEKMTKKVSVTDPG 371
            K                 +  DL+                +A ++F+   +     D  
Sbjct: 300 KKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVW 359

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           +Y I+I    K  + DEAL   +        P  +T++++I  LC  G+I  A  L   +
Sbjct: 360 SYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAI 419

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           ++    P+  +Y++++  L +++    A  L+    ++G+ P 
Sbjct: 420 HDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPN 462



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 96/178 (53%), Gaps = 2/178 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + + E + +F+ +       ++  ++ L+  L        A + FS     G +PN  
Sbjct: 370 KNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVI 429

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++IM+   C      +A ++ + MF+ G  PNV+++ IL+N  CKS R+ EA+ + ++M
Sbjct: 430 TYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEM 489

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP-DVYTYTAVMDGFCKV 238
            R    P+  TYNCL+ GLC  GR+  A+E L NV +DG  P DV TY  + D F K+
Sbjct: 490 HRRNLVPDSVTYNCLIDGLCKSGRISHAWE-LFNVMHDGGPPVDVITYNILFDAFSKI 546



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 1/162 (0%)

Query: 46  KENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA 104
           K  P  +     +D + K+  +    ++F +I   G + +V  +N +L AL  +   + A
Sbjct: 388 KLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKA 447

Query: 105 VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
           ++ F+     GL PN  +++I+I  YC      EA  + + M      P+  T+  L++ 
Sbjct: 448 IELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDG 507

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
           LCKSGR+  A E+ + M   G   ++ TYN L      +  V
Sbjct: 508 LCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 202/390 (51%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ DF  +L  +  +N+ +  +  + +  + G++ + ++F+I+I C+C  +    A  ++
Sbjct: 78  SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G+ P++ T   L+N  C+  R +EA+ ++D M   G  PN+  YN ++ GLC  
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
             +  A E+   ++  G++ D  TY  ++ G    GR  +A  LL + ++R + PNV+ F
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             L + + KEG  ++   L K M +R+ +P+  +Y++L+NG    G +  A  +F  MV 
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D    N+L+ G C     +   +ED  ++F +MT +  V D  TY  +I    + 
Sbjct: 318 KGCFPDVVTYNTLITGFC-----KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            K + A    +  ++ G  P  +T+N ++  LC  GKI+KAL+++  + +        +Y
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +++I  L + +K  +A  L+ +  ++GV P
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 150/306 (49%), Gaps = 6/306 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   +++F  ++K G       +N L+  L        A +   +     + PN  
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  +  + +  EAR +   M      PNV T+  L+N  C  G L +A  + D M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P++ TYN L+ G C   RVE+  ++   +   GL  D +TY  ++ G+C+ G+ 
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           N A ++ N  ++ GV+P++VT+N L +  C  G   K + +++ ++K     D I+Y+ +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE-EKDLL-----EDAY 355
           + GL +  K++ A  +F+ + R G + D     +++ GLC K  + E D L     ED +
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495

Query: 356 QVFEKM 361
              E++
Sbjct: 496 MPSERI 501



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 120/235 (51%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   + E     + PN +T++ +I  +C      +A+ + D M   G  P+V T+  L+ 
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             CKS R+++ +++  +M   G   +  TYN L+ G C  G++  A ++   + + G+ P
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D+ TY  ++D  C  G+  +A+ ++ +  +  +  +++T+N +  G C+     +   L 
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
           + + ++   PD I+Y T+++GL + G  R A  + + M   GF   ER+ +  LR
Sbjct: 453 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 114/242 (47%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L E  +++  + +     +V  +N L+    +      A   F    S G  P+ 
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I  +C      +  K+   M   G   +  T+  L++  C++G+L  A +V ++
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P+I TYN LL  LC  G++E+A  M+ +++   +  D+ TY  ++ G C+  +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA  L      +GV P+ + + T+ +G C++G   +   L + MK+   +P +  Y  
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504

Query: 301 LL 302
            L
Sbjct: 505 TL 506



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 7/270 (2%)

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           + ++A+ +   +      P +  +T V+    K+ + +  + L ++    G++ ++ +F 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L + +C+       + LL  M K    P  ++  +LLNG  +  + + AVS+   M  F
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG-KG 383
           GF  +  + N+++ GLC    + +D L +A +VF  M KK    D  TY  +I  L   G
Sbjct: 179 GFVPNVVIYNTVINGLC----KNRD-LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           + TD A + L   ++    P  I F  +I     EG + +A  L   M   + +P+  +Y
Sbjct: 234 RWTDAARL-LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + LI          DA  ++   + +G  P
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 200/392 (51%), Gaps = 11/392 (2%)

Query: 88  FNDLLMALVMLN------EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           F D++   VM++      + E A+       S GL P   T++ +++  C    + +A +
Sbjct: 127 FPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWE 186

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V   M D G  P+V +FTIL+   C+ G ++EAL++  +M   G KP++ +++CL+    
Sbjct: 187 VFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFA 246

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G+++ A   L  ++  GL PD   YT V+ GFC+ G  ++A+ + +E +  G  P+VV
Sbjct: 247 RRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVV 306

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+NTL NG CKE   +   GLL  M++R   PD  +++TL++G    GK+  A+ +F  M
Sbjct: 307 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 366

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +      D    N+L+ G+C      +  L+ A  +++ M  +    +  TY I+I +  
Sbjct: 367 LNQRLRPDIVTYNTLIDGMC-----RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 421

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           +  + ++A   L   I  G +P  +T+N++I+  C  G + K    L  M  +   P   
Sbjct: 422 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 481

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +Y+ LI    + +K +DA  L     K+ V P
Sbjct: 482 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 513



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 194/416 (46%), Gaps = 5/416 (1%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           R +A   +  + + DS+   G    +  +N +L  L      + A + F E   +G+AP+
Sbjct: 140 RFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPD 199

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             +F+I+I  +C   +  EA K+   M   G  P++ +F+ L+    + G++  A+  L 
Sbjct: 200 VRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLR 259

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M   G  P+   Y  ++ G C  G + +A  +   +   G  PDV TY  +++G CK  
Sbjct: 260 EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 319

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R  +A  LLNE  ERGV P++ TF TL +GYC EG   K + L   M  +   PD ++Y+
Sbjct: 320 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 379

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL++G+ + G +  A  ++ +M        E   N +   + + S  EK  +EDA+   +
Sbjct: 380 TLIDGMCRQGDLDKANDLWDDM-----HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 434

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M  K  + +  TY  +I+   +     +    L   +     P  IT+N +I     E 
Sbjct: 435 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 494

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           K+  A  LL +M +    P   +Y+MLI          +A  ++     +G+ P R
Sbjct: 495 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 550



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 183/355 (51%), Gaps = 5/355 (1%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N++T +IM+  YC   +F +   VI  M      P+V T  ++V++  ++G  + A+ ++
Sbjct: 94  NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D M   G KP I TYN +LKGLC  G  ++A+E+   + + G+ PDV ++T ++ GFC+V
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G   EA+++  E   RG+ P++V+F+ L   + + G     +  L+ M+    +PD + Y
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + ++ G  + G +  A+ +  EMV  G   D    N+LL GLC    +E+ LL DA  + 
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC----KERRLL-DAEGLL 328

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            +M ++    D  T+  +I       K D+AL      +     P  +T+N +I  +C +
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 388

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G +DKA  L   M+     P+  +Y +LI    +  +  DA       + +G++P
Sbjct: 389 GDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 443



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 154/303 (50%), Gaps = 5/303 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + + + + D +   G    V  +N LL  L        A    +E    G+ P+  
Sbjct: 282 RAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLC 341

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  YC +    +A ++ D M +    P++ T+  L++ +C+ G L +A ++ D M
Sbjct: 342 TFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM 401

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 PN  TY+ L+   C  G+VE+A+  L  + N G+ P++ TY +++ G+C+ G  
Sbjct: 402 HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 461

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++  + L + +   V+P+++T+NTL +GY KE        LL +M+K    PD ++Y+ L
Sbjct: 462 SKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 521

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG    G ++ A  IF++M   G E D     S++ G            ++A+Q+ ++M
Sbjct: 522 INGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS-----KEAFQLHDEM 576

Query: 362 TKK 364
            ++
Sbjct: 577 LQR 579



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 134/256 (52%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + + +++ G    +  F  L+    +  + + A++ F    +  L P+  T++ +I   C
Sbjct: 327 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 386

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            + D  +A  + D M      PN  T++IL++S C+ G++++A   LD+M   G  PNI 
Sbjct: 387 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 446

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN ++KG C  G V +  + L  +  + + PD+ TY  ++ G+ K  + ++A +LLN  
Sbjct: 447 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 506

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            +  V P+VVT+N L NG+   G   +   + + M  +   PD+ +Y +++NG +  G  
Sbjct: 507 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 566

Query: 312 RPAVSIFKEMVRFGFE 327
           + A  +  EM++ G E
Sbjct: 567 KEAFQLHDEMLQRGKE 582


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 202/414 (48%), Gaps = 9/414 (2%)

Query: 63  ASPLKERIDIFDSIKKDGTN---WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           A  ++   D   +I++ G+     S   +N  L +L   +  E   + +S+    GL P+
Sbjct: 123 AEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPD 182

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           + T++ MI+ YC + D   A +    + + G  P   T   LV   C++G L++A  +  
Sbjct: 183 TVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFL 242

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M  +GC+ N  +Y  L++GLC    V +A  + + +K DG  P+V  +T ++ G CK G
Sbjct: 243 MMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSG 302

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R  +A  L +   + GV P+V+T+N +  GY K G     + + +LM+K  C PD  +Y+
Sbjct: 303 RVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYN 362

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL+ GL    K   A  +    V+ GF        +L+ G CM    EK   +DA ++  
Sbjct: 363 TLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA---EK--FDDALRMKN 416

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           KM       D   +G +I +L K  +  EA   L+     G +P  IT+ ++I   C  G
Sbjct: 417 KMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSG 476

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           K+D AL +L +M      P+  +Y+ L+  L + +K + A AL     K G+IP
Sbjct: 477 KVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIP 530



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 198/412 (48%), Gaps = 9/412 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + I + ++K+G +     +N L+  L    + E A +  + A   G  P   
Sbjct: 335 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVV 393

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  YC    F +A ++ + M  +    ++  F  L+NSL K  RLKEA E+L+++
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 453

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN+ TY  ++ G C  G+V+ A E+L  ++ DG +P+ +TY ++M G  K  + 
Sbjct: 454 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 513

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++AM LL +  + G+ PNV+T+ TL  G C E        L ++M++    PD+ +Y+ L
Sbjct: 514 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 573

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            + L K G+   A S    +VR G  + +    +L+ G     + +    + A  + E+M
Sbjct: 574 TDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDG-----FSKAGNTDFAATLIERM 625

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +    D  TY +++  L K K+ +EAL  L      G       +  +I  +  EGK 
Sbjct: 626 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 685

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           D A  +   M      PS T+Y + I    +  +  DA  L     ++GV P
Sbjct: 686 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAP 737



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 189/424 (44%), Gaps = 43/424 (10%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++   +++DG   +   +N L+  LV   +   A+   ++    G+ PN  T++ +++ 
Sbjct: 482 LEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG 541

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE------------- 176
            C+++DF  A ++ + M  NG  P+   + +L ++LCK+GR +EA               
Sbjct: 542 QCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVY 601

Query: 177 -------------------VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
                              ++++M   GC P+  TY+ LL  LC   R+ EA  +L  + 
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G+K  ++ YT ++D   + G+ + A  + NE    G  P+  T+    N YCKEG   
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER----MM 333
               L+  M++    PD ++Y+ L++G    G I  A S  K MV    E +      ++
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781

Query: 334 NSLLRG--LCMKSWEEKDL-----LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             LL+G    ++S +   +     L+  +Q+ E+M K        TY  +I    K  + 
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           +EA + L H    G  P    +  +I+  C     +KAL  + +M E    P   SY +L
Sbjct: 842 EEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL 901

Query: 447 ITKL 450
           +  L
Sbjct: 902 VVGL 905



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 187/439 (42%), Gaps = 57/439 (12%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L + + +   ++KDG   +V  +  LL      ++ + A + F      GL P+ 
Sbjct: 508 VKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDE 567

Query: 121 WTFSIMIRCYCNKNDFFEA-----RK---------------------------VIDCMFD 148
             ++++    C      EA     RK                           +I+ M D
Sbjct: 568 HAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMID 627

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G  P+  T+++L+++LCK  RL EAL +LDQM   G K  I  Y  L+  +   G+ + 
Sbjct: 628 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 687

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  M   + + G KP   TYT  ++ +CK GR  +A +L+ +    GV P+VVT+N L +
Sbjct: 688 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK--------------WGKIRPA 314
           G    G   +    LK M   +C P+  +Y  LL  LLK              W  I   
Sbjct: 748 GCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELD 807

Query: 315 VS--IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
           ++  + + MV+ G        +SL+ G C     +   LE+A  + + M  K    +   
Sbjct: 808 ITWQLLERMVKHGLNPTVTTYSSLIAGFC-----KAGRLEEACLLLDHMCGKGLSPNEDI 862

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA----LLLL 428
           Y ++I+     K  ++AL  +    E G  P+  ++  ++  LC EG  +K       LL
Sbjct: 863 YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 922

Query: 429 FLMYEHAKIPSRTSYDMLI 447
            L Y H ++  +   D L+
Sbjct: 923 ELGYNHDEVAWKILNDGLL 941



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 178/429 (41%), Gaps = 24/429 (5%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK   LKE  ++ + I  +G   +V  +  ++       + + A++        G  PN+
Sbjct: 438 IKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNA 497

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           WT++ ++          +A  ++  M  +G  PNV T+T L+   C       A  + + 
Sbjct: 498 WTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEM 557

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + G KP+   Y  L   LC  GR EEAY  ++     G+      YT ++DGF K G 
Sbjct: 558 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGN 614

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           ++ A  L+   I+ G TP+  T++ L +  CK+    + + +L  M  R       +Y+ 
Sbjct: 615 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 674

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++ +L+ GK   A  ++ EM   G +         +   C     ++  LEDA  +  K
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC-----KEGRLEDAEDLILK 729

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG- 419
           M ++    D  TY I+I   G     D A   L   +     P   T+  +++ L     
Sbjct: 730 MEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNL 789

Query: 420 ---------------KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
                          ++D    LL  M +H   P+ T+Y  LI    +  +  +AC L  
Sbjct: 790 AYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLD 849

Query: 465 AALKQGVIP 473
               +G+ P
Sbjct: 850 HMCGKGLSP 858



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 18/261 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L++  D+   ++++G    V  +N L+     +   + A             PN W
Sbjct: 716 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYW 775

Query: 122 TFSIMIRCYCNKNDFFEARKV-----------------IDCMFDNGYHPNVTTFTILVNS 164
           T+ ++++ +  K +    R V                 ++ M  +G +P VTT++ L+  
Sbjct: 776 TYCLLLK-HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAG 834

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
            CK+GRL+EA  +LD M   G  PN   Y  L+K  C     E+A   +  +   G +P 
Sbjct: 835 FCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQ 894

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           + +Y  ++ G C  G   +   L  + +E G   + V +  L +G  K G       +L 
Sbjct: 895 LESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLS 954

Query: 285 LMKKRNCLPDKISYSTLLNGL 305
           +M+KR C     +Y+ + N +
Sbjct: 955 IMEKRYCCISSQTYALVTNKM 975


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 198/411 (48%), Gaps = 8/411 (1%)

Query: 38  STAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM 97
           ++ ES +      SL+ Q     IK   L++ ID+F  + +     SV DF  L+  +V 
Sbjct: 34  ASGESCEAGFGGESLKLQSGFHEIKG--LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVR 91

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           +   +  +  + +     +  + ++F+I+I+C+C+ +    A      +   G HP+V T
Sbjct: 92  MERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVT 151

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F  L++ LC   R+ EAL +  QM    C+PN+ T+  L+ GLC  GR+ EA  +L  + 
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE-RGVTPNVVTFNTLFNGYCKEGTP 276
            DGL+P   TY  ++DG CK G +  A+ LL +  E   + PNVV ++ + +  CK+G  
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                L   M+++   PD  +Y++++ G    G+   A  + +EM+      D    N+L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +        +E    E A +++++M  +  + +  TY  +I    K  + D A    +  
Sbjct: 332 INAF----VKEGKFFE-AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              G  P  ITFN +I   CG  +ID  + LL  M E   +   T+Y+ LI
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 181/381 (47%), Gaps = 16/381 (4%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F+E    G+ P+ +T++ MI  +C+   + +A +++  M +    P+V T+  L+N
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +  K G+  EA E+ D+M   G  PN  TY+ ++ G C   R++ A  M   +   G  P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           ++ T+  ++DG+C   R ++ MELL+E  E G+  +  T+NTL +G+   G     + LL
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-----------GFEVDERM 332
           + M      PD ++  TLL+GL   GK++ A+ +FK M +            G E D + 
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+ GL      E   LE A +++E+M  +  V D  TY  +I  L K  + DEA   
Sbjct: 514 YNILISGL----INEGKFLE-AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
                     P  +TF  +I   C  G++D  L L   M     + +  +Y  LI    +
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628

Query: 453 LEKSYDACALYGAALKQGVIP 473
           +     A  ++   +  GV P
Sbjct: 629 VGNINGALDIFQEMISSGVYP 649



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 214/491 (43%), Gaps = 87/491 (17%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L   +  F  + K G +  V  FN LL  L + +    A+  F +       PN  TF
Sbjct: 128 SKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHP------------------------------ 153
           + ++   C +    EA  ++D M ++G  P                              
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247

Query: 154 ------NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                 NV  ++ +++SLCK GR  +A  +  +M   G  P++ TYN ++ G C  GR  
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV----------- 256
           +A ++L  +    + PDV TY A+++ F K G+  EA EL +E + RG+           
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367

Query: 257 ------------------------TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                                   +PN++TFNTL +GYC       G+ LL  M +   +
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLV 427

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            D  +Y+TL++G    G +  A+ + +EM+  G   D    ++LL GLC  + + KD LE
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDALE 486

Query: 353 DAYQVFEKMTKKVSVTDP--------GTYGIVIRTL---GKGKKTDEALIHLHHAIEMGH 401
             ++V +K  K +  + P         TY I+I  L   GK  + +E    + H    G 
Sbjct: 487 -MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR---GI 542

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           +P TIT++++I  LC + ++D+A  +   M   +  P+  ++  LI    +  +  D   
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 462 LYGAALKQGVI 472
           L+    ++G++
Sbjct: 603 LFCEMGRRGIV 613



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 168/335 (50%), Gaps = 17/335 (5%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D   K + L     +F  +   G + ++  FN L+         +  ++ 
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E +  GL  ++ T++ +I  +    D   A  ++  M  +G  P++ T   L++ LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 168 SGRLKEALEVLDQMGRI-----------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           +G+LK+ALE+   M +            G +P++QTYN L+ GL   G+  EA E+   +
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            + G+ PD  TY++++DG CK  R +EA ++ +    +  +PNVVTF TL NGYCK G  
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
             G+ L   M +R  + + I+Y TL+ G  K G I  A+ IF+EM+  G   D   + ++
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           L GL    W  K+ L+ A  + EK+   + ++  G
Sbjct: 658 LTGL----W-SKEELKRAVAMLEKLQMSMDLSFGG 687



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 134/304 (44%), Gaps = 41/304 (13%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           L++A+++   M R    P++  +  L+  +  + R +    +   ++   ++ D+Y++T 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++  FC   +   A+    +  + G+ P+VVTFNTL +G C E    + + L   M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C P+ ++++TL+NGL + G+I  AV++            +RMM                 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALL-----------DRMM----------------- 211

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFN 409
            ED  Q  +            TYG ++  + K   T  AL  L    E+ HI P  + ++
Sbjct: 212 -EDGLQPTQI-----------TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I +LC +G+   A  L   M E    P   +Y+ +I       +  DA  L    L++
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 470 GVIP 473
            + P
Sbjct: 320 KISP 323


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 215/456 (47%), Gaps = 32/456 (7%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D   ++  L   I  FD + +DG   +V  +N L+       +   A   
Sbjct: 398 PNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESL 457

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F E ++ G+ P + TF+ +I  YC      +A K+ + M DNG  PNV TFT L++ LC 
Sbjct: 458 FIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCS 517

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           + ++ EA E+ D++     KP   TYN L++G C  G++++A+E+L ++   GL PD YT
Sbjct: 518 TNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYT 577

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++ G C  GR ++A + +++  ++ V  N + ++ L +GYC+EG  M+ +     M 
Sbjct: 578 YRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMI 637

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL-----RGLCM 342
           +R    D + ++ L++G LK    +    + K+M   G   D  +  S++      G   
Sbjct: 638 QRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFK 697

Query: 343 KSWEEKDL-------------------------LEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           K++E  DL                         ++ A  +F++M       +  TYG  +
Sbjct: 698 KAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFL 757

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L K     EA I LHHA+  G +  T+T N +I+  C  G+  +A  +L  M E+   
Sbjct: 758 DNLTKEGNMKEA-IGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIF 816

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P   +Y  LI +  +      +  L+   L +G+ P
Sbjct: 817 PDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEP 852



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 188/402 (46%), Gaps = 42/402 (10%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V   + LL  L+ + +  T  + F E+ + G+ P+ +T S ++R  C   DF  A++ I 
Sbjct: 190 VRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIR 249

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV- 203
            M  NG+  ++ T+ +L++ LCK  R+ EA+EV   +G  G   ++ TY  L+ G C + 
Sbjct: 250 WMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQ 309

Query: 204 ----------------------------------GRVEEAYEMLMNVKNDGLKPDVYTYT 229
                                             G++++AYE+++ V   G  P+++ Y 
Sbjct: 310 QFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYN 369

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           A+++  CK G  ++A  L +      + PN +T++ L + +C+ G     +     M + 
Sbjct: 370 ALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQD 429

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
                  +Y++L+NG  K+G +  A S+F EM   G E       SL+ G C      KD
Sbjct: 430 GIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYC------KD 483

Query: 350 L-LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
           L ++ A++++ KM       +  T+  +I  L    K  EA       +E    P  +T+
Sbjct: 484 LQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTY 543

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           N +I+  C +GKIDKA  LL  M++   +P   +Y  LI+ L
Sbjct: 544 NVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGL 585



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 195/426 (45%), Gaps = 6/426 (1%)

Query: 26  FNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWS 84
           F +L  F A      E ++L  +P        VD + K   + +  ++   + + G   +
Sbjct: 305 FCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPN 364

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  +N L+ +L    + + A   +S  S   L PN  T+SI+I  +C       A    D
Sbjct: 365 LFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFD 424

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M  +G    V  +  L+N  CK G L  A  +  +M   G +P   T+  L+ G C   
Sbjct: 425 RMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDL 484

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +V++A+++   + ++G+ P+VYT+TA++ G C   +  EA EL +E +ER + P  VT+N
Sbjct: 485 QVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYN 544

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L  GYC++G   K   LL+ M ++  +PD  +Y  L++GL   G++  A     ++ + 
Sbjct: 545 VLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQ 604

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             +++E   ++LL G C    +E  L+E      E + + +++ D   + ++I    K  
Sbjct: 605 NVKLNEMCYSALLHGYC----QEGRLMEALSASCEMIQRGINM-DLVCHAVLIDGALKQP 659

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
                   L    + G  P  + + ++I     EG   KA     LM      P+  +Y 
Sbjct: 660 DRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYT 719

Query: 445 MLITKL 450
            L+  L
Sbjct: 720 ALMNGL 725



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 174/349 (49%), Gaps = 5/349 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++ +G + S+  +N L+  L   +    AV+        GLA +  T+  ++  +C    
Sbjct: 251 MEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQ 310

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           F    +++D M + G+ P     + LV+ L K G++ +A E++ ++GR G  PN+  YN 
Sbjct: 311 FEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNA 370

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+  LC  G +++A  +  N+    L+P+  TY+ ++D FC+ GR + A+   +  I+ G
Sbjct: 371 LINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDG 430

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           +   V  +N+L NG CK G       L   M  +   P   ++++L++G  K  +++ A 
Sbjct: 431 IGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAF 490

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            ++ +M+  G   +     +L+ GLC       + + +A ++F+++ ++       TY +
Sbjct: 491 KLYNKMIDNGITPNVYTFTALISGLC-----STNKMAEASELFDELVERKIKPTEVTYNV 545

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +I    +  K D+A   L    + G +P T T+  +I  LC  G++ KA
Sbjct: 546 LIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKA 594



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 176/384 (45%), Gaps = 7/384 (1%)

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWT--FSIMIRCYCNKNDFFEARKVIDCMFDN 149
           L+  ++L E      F     SY     S T  F+++++ Y   +  F+A  ++  MF N
Sbjct: 125 LLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFAN 184

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
              P V T + L+N L K  +     E+ D+    G +P+  T + +++ +C +     A
Sbjct: 185 NLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRA 244

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            E +  ++ +G    + TY  ++ G CK  R +EA+E+      +G+  +VVT+ TL  G
Sbjct: 245 KEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLG 304

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           +C+      G+ L+  M +    P + + S L++GL K GKI  A  +  ++ RFGF  +
Sbjct: 305 FCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPN 364

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
             + N+L+  LC     +   L+ A  ++  M+      +  TY I+I +  +  + D A
Sbjct: 365 LFVYNALINSLC-----KGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVA 419

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           + +    I+ G       +N++I   C  G +  A  L   M      P+ T++  LI+ 
Sbjct: 420 ISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISG 479

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
             +  +   A  LY   +  G+ P
Sbjct: 480 YCKDLQVQKAFKLYNKMIDNGITP 503



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 118/234 (50%), Gaps = 1/234 (0%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           +++T      +    GL P++  ++ MI  Y  +  F +A +  D M      PNV T+T
Sbjct: 660 DRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYT 719

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L+N LCK+G +  A  +  +M      PN  TY C L  L   G ++EA   L +    
Sbjct: 720 ALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIG-LHHAMLK 778

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           GL  +  T+  ++ GFCK+GR +EA ++L+E  E G+ P+ VT++TL   YC+ G     
Sbjct: 779 GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGAS 838

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           V L   M  R   PD ++Y+ L+ G    G++  A  +  +M+R G   D + +
Sbjct: 839 VKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNKYL 892



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 6/224 (2%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M D G  P+   +T ++++  K G  K+A E  D M    C PN+ TY  L+ GLC  G 
Sbjct: 671 MHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGE 730

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++ A  +   ++   + P+  TY   +D   K G   EA+ L + A+ +G+  N VT N 
Sbjct: 731 MDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGL-HHAMLKGLLANTVTHNI 789

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +  G+CK G   +   +L  M +    PD ++YSTL+    + G +  +V ++  M+  G
Sbjct: 790 IIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRG 849

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            E D    N L+ G C+        L+ A+++ + M ++  + D
Sbjct: 850 LEPDLVAYNLLIYGCCVNGE-----LDKAFELRDDMLRRGIIPD 888



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 2/142 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+    F+D + K   +KE I +  ++ K G   +    N ++     L     A K 
Sbjct: 748 PNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKV 806

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            SE +  G+ P+  T+S +I  YC   +   + K+ D M + G  P++  + +L+   C 
Sbjct: 807 LSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCV 866

Query: 168 SGRLKEALEVLDQMGRIGCKPN 189
           +G L +A E+ D M R G  P+
Sbjct: 867 NGELDKAFELRDDMLRRGIIPD 888


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 197/406 (48%), Gaps = 5/406 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + ID F+ + +      +  F  +L +LV        +  F     +G+  N  T +I
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC+      A  V   +   GY P++ T+T L+  LC +G++KE+L   D++   G
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            K +  +Y  L+ GLC +G+   A  +L  ++ +  +PDV  Y  ++DG CK     +A 
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L  E  E+ V PNVVT+ +L  G+C  G   K  GLL  M  +N  P+  +++TL++GL
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL 269

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GK+R A S+   M++ G   D    N+L+ G  +     K     A  VF  M +  
Sbjct: 270 CKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGK-----AKNVFNIMAQMG 324

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  +Y ++I  L K K  DEA+           IP  + ++++I  LC  G+I+ AL
Sbjct: 325 VTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSAL 384

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
             +  M++  + P+  +Y  LI  L +  +   A AL      QG+
Sbjct: 385 KYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGI 430



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 185/382 (48%), Gaps = 5/382 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE ++  D +   G       +  L+  L  + +   A++   +       P+   ++ 
Sbjct: 135 VKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNT 194

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A  +   MF+    PNV T+T L+   C  G+L +A  +L++M    
Sbjct: 195 IIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKN 254

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ T+N L+ GLC  G++ EA  ++  +  +G+ PDV+TY A+MDG+  V  + +A 
Sbjct: 255 VNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAK 314

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + N   + GVT +V +++ + +G  K     + + L + M+  N +PD ++YS+L++GL
Sbjct: 315 NVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGL 374

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I  A+    EM   G   +     SL+  LC     +   ++ A  + +K+  + 
Sbjct: 375 CKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALC-----KSHQVDKAIALLKKIKDQG 429

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY I++  L K  +  +A       +  GH    +T++ +I  LC E   D+AL
Sbjct: 430 IQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEAL 489

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
            LL  M +   +P   +Y+ +I
Sbjct: 490 TLLSKMEDKGCVPDAIAYETII 511



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 157/306 (51%), Gaps = 5/306 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +  L+    ++ + + A    +E     + PN  TF+ ++   C +    EA+ ++
Sbjct: 223 NVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLV 282

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G  P+V T+  L++         +A  V + M ++G   ++ +Y+ ++ GL  +
Sbjct: 283 AVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKM 342

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
             ++EA ++   ++N+ + PDV  Y++++DG CK GR N A++ ++E  +RG  PNV+T+
Sbjct: 343 KMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITY 402

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
            +L +  CK     K + LLK +K +    +  +Y+ L++GL K G++  A  +F++++ 
Sbjct: 403 TSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLM 462

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G  VD    + ++ GLC +S     L ++A  +  KM  K  V D   Y  +I    + 
Sbjct: 463 KGHNVDVVTYSIMINGLCKES-----LFDEALTLLSKMEDKGCVPDAIAYETIINAFFEK 517

Query: 384 KKTDEA 389
              D+A
Sbjct: 518 DMNDKA 523



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 161/325 (49%), Gaps = 5/325 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   + E     + PN  T++ +I  +C      +A  +++ M     +PNV TF  LV+
Sbjct: 208 AFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVD 267

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK G+++EA  ++  M + G  P++ TYN L+ G   V    +A  +   +   G+  
Sbjct: 268 GLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTC 327

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV++Y+ ++ G  K+   +EAM+L        V P+VV +++L +G CK G     +  +
Sbjct: 328 DVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYV 387

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M  R   P+ I+Y++L++ L K  ++  A+++ K++   G + +    N L+ GLC  
Sbjct: 388 DEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLC-- 445

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   L DA +VF+ +  K    D  TY I+I  L K    DEAL  L    + G +P
Sbjct: 446 ---KDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVP 502

Query: 404 RTITFNNVIQALCGEGKIDKALLLL 428
             I +  +I A   +   DKA  LL
Sbjct: 503 DAIAYETIINAFFEKDMNDKAEKLL 527



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 144/276 (52%), Gaps = 1/276 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        VD + K   ++E   +   + K+G    V  +N L+    ++ E   A  
Sbjct: 256 NPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKN 315

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F+  +  G+  +  ++S+MI          EA  + + M +    P+V  ++ L++ LC
Sbjct: 316 VFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLC 375

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSGR+  AL+ +D+M   G  PN+ TY  L+  LC   +V++A  +L  +K+ G++ ++Y
Sbjct: 376 KSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMY 435

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY  ++DG CK GR  +A ++  + + +G   +VVT++ + NG CKE    + + LL  M
Sbjct: 436 TYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKM 495

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           + + C+PD I+Y T++N   +      A  + +EM+
Sbjct: 496 EDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 148/321 (46%), Gaps = 5/321 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +  F  ++ SL K+      + +  +M   G + N  T N L+   C++ ++  A+ +
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G +PD+ TYT ++ G C  G+  E++   +  + +G+  + V++ TL NG CK
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     + LL+ ++   C PD + Y+T+++GL K   +R A  ++ EM       +   
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             SL+ G C+        L+ A+ +  +M  K    +  T+  ++  L K  K  EA   
Sbjct: 227 YTSLIYGFCIVG-----QLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSL 281

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           +   ++ G  P   T+N ++       +  KA  +  +M +        SY ++I+ L +
Sbjct: 282 VAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSK 341

Query: 453 LEKSYDACALYGAALKQGVIP 473
           ++   +A  L+     + VIP
Sbjct: 342 MKMLDEAMDLFEGMRNENVIP 362



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 97/192 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E +D+F+ ++ +     V  ++ L+  L       +A+K+  E    G  PN  
Sbjct: 341 KMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVI 400

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C  +   +A  ++  + D G   N+ T+ ILV+ LCK GRL +A +V   +
Sbjct: 401 TYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDL 460

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   ++ TY+ ++ GLC     +EA  +L  +++ G  PD   Y  +++ F +   +
Sbjct: 461 LMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMN 520

Query: 242 NEAMELLNEAIE 253
           ++A +LL E I+
Sbjct: 521 DKAEKLLREMID 532


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 205/432 (47%), Gaps = 31/432 (7%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D +K+ G   SV  FN +L  L    + + A+  F EA      PNS T++I+I   C
Sbjct: 344 LLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKKDAEPNSSTYNIIIDMLC 402

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA  + D M   G  PN+ T  I+V+ LCK+ + + A E+ +   + GC PN  
Sbjct: 403 MAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSV 462

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+ GL   G V++AY +  N+ + G   +   YT+++  F   GR  +  ++  E 
Sbjct: 463 TYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEM 522

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             RG  P++   NT  +   K G   KG  + + +K    LPD  SYS L++GL K G+ 
Sbjct: 523 NRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQA 582

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-----KSWE-------------------- 346
           R   SIF  M + GF +D R  N+++ G C      K++E                    
Sbjct: 583 RETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSI 642

Query: 347 -----EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                + D L++AY +FE+   K    +   Y  +I   GK  + DEA + L   ++ G 
Sbjct: 643 IDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGL 702

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P   T+N+++ AL    +I++AL+    M E    P+  +Y +LI  L +++K   A  
Sbjct: 703 TPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFV 762

Query: 462 LYGAALKQGVIP 473
            +    KQG++P
Sbjct: 763 FWQEMQKQGLVP 774



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 210/429 (48%), Gaps = 6/429 (1%)

Query: 36  SLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMA 94
           +L+  E++     P S      +D +  A  ++E   I D ++  G   ++   N ++  
Sbjct: 376 ALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDR 435

Query: 95  LVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPN 154
           L    + E A + F  AS  G  PNS T+  +I     K +  +A ++ + M D G++ N
Sbjct: 436 LCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNAN 495

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
              +T L+ +    GR ++  ++  +M R GC+P++   N  +  +   G VE+   +  
Sbjct: 496 PVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFE 555

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
           ++K  G  PDV +Y+ ++ G  K G++ E   + +   ++G   +   +N + +G+CK G
Sbjct: 556 DIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSG 615

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              K   +L+ MK +   P   +Y ++++GL K  ++  A  +F+E    G E++  + +
Sbjct: 616 KLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYS 675

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           SL+ G     + +   +++AY + E+M KK    +  T+  ++  L K ++ +EALI   
Sbjct: 676 SLIDG-----FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQ 730

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
              EM   P T T++ +I  LC   K +KA +    M +   +P+  +Y  +I  L ++ 
Sbjct: 731 SMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVG 790

Query: 455 KSYDACALY 463
              DAC+L+
Sbjct: 791 NITDACSLF 799



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 159/331 (48%), Gaps = 15/331 (4%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF  + + G    ++  N  +  +    + E     F +   YG  P+  ++SI+I    
Sbjct: 518 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 577

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 E   +   M   G+  +   +  +V+  CKSG+L +A EVL++M      P + 
Sbjct: 578 KAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVA 637

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  ++ GL  + R++EAY +    K+ G++ +V  Y++++DGF KVGR +EA  +L E 
Sbjct: 638 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 697

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+TPNV T+N+L +   K     + +   + MK+  C P+  +YS L+NGL +  K 
Sbjct: 698 MKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 757

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A   ++EM + G   +     +++ GL      +   + DA  +FE+        D  
Sbjct: 758 NKAFVFWQEMQKQGLVPNVVTYTTMIAGLA-----KVGNITDACSLFERFKANGGTPDAA 812

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
           ++  +I          E + H + AIE  H+
Sbjct: 813 SFNALI----------EGMSHANRAIEAYHV 833



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/411 (24%), Positives = 196/411 (47%), Gaps = 11/411 (2%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP S+     +D + K   + +   +F+++   G N +   +  L+    M   +E   K
Sbjct: 458 NPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHK 517

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F E +  G  P+    +  + C     D  + R + + +   G+ P+V +++IL++ L 
Sbjct: 518 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 577

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K+G+ +E   +   M + G   + + YN ++ G C  G++++AYE+L  +K   + P V 
Sbjct: 578 KAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVA 637

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY +++DG  K+ R +EA  L  EA  +G+  NV+ +++L +G+ K G   +   +L+ M
Sbjct: 638 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 697

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            K+   P+  ++++L++ L+K  +I  A+  F+ M       +    + L+ GLC     
Sbjct: 698 MKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 757

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
            K     A+  +++M K+  V +  TY  +I  L K     +A          G  P   
Sbjct: 758 NK-----AFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAA 812

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS-RTSYDMLITKLDQLEKS 456
           +FN +I+ +    +  +A    + ++E  ++   R +    I+ LD L K+
Sbjct: 813 SFNALIEGMSHANRAIEA----YHVFEETRLKGCRINVKACISLLDALNKA 859



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 176/384 (45%), Gaps = 6/384 (1%)

Query: 90  DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
           DL+ ALV     + A +  +        P    ++++I           A +++  M + 
Sbjct: 152 DLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEV 211

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           GY   V  FT LV +L + GR++ AL ++D++     +P+I  YN  +      G V+ A
Sbjct: 212 GYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMA 271

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
           ++    +K+ GLKPD  +YT+++   CK GR +EA EL  +       P    +NT+  G
Sbjct: 272 WKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMG 331

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           Y   G       LL  +K+R C+P  +S++++L  L K  K+  A+++F+ M +   E +
Sbjct: 332 YGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPN 390

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N ++  LCM        +E+AY + ++M       +  T  I++  L K KK + A
Sbjct: 391 SSTYNIIIDMLCMAGK-----VEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPA 445

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
                 A + G  P ++T+ ++I  L  +G +D A  L   M +     +   Y  LI  
Sbjct: 446 YEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRN 505

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
                +  D   ++    ++G  P
Sbjct: 506 FFMHGRKEDGHKIFKEMNRRGCQP 529



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/467 (22%), Positives = 191/467 (40%), Gaps = 66/467 (14%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++   +++ G    V  F  L+ AL      E A+    E     L P+   +++ I C
Sbjct: 202 LELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDC 261

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE------------- 176
           +    +   A K    +   G  P+  ++T ++  LCK+GRL EA E             
Sbjct: 262 FGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPC 321

Query: 177 ----------------------VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
                                 +LDQ+   GC P++ ++N +L  L    +V+EA  +  
Sbjct: 322 AYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFE 381

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +K D  +P+  TY  ++D  C  G+  EA  + +E    G+ PN++T N + +  CK  
Sbjct: 382 AMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAK 440

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
                  + +   +R C P+ ++Y +L++GL K G +  A  +F+ M+  G   +  +  
Sbjct: 441 KFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYT 500

Query: 335 SLLRGLCMKSWEEK---------------DL---------------LEDAYQVFEKMTKK 364
           SL+R   M   +E                DL               +E    +FE +   
Sbjct: 501 SLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGY 560

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             + D  +Y I+I  L K  +  E     H   + G       +N V+   C  GK+DKA
Sbjct: 561 GFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKA 620

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
             +L  M      P+  +Y  +I  L ++++  +A  L+  A  +G+
Sbjct: 621 YEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGI 667



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 165/341 (48%), Gaps = 8/341 (2%)

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
           +D     KV++ M   GY         LV++L ++ RL +A  V+  M R+  +P    Y
Sbjct: 126 HDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAY 185

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
             L+  +    + E A E+L  ++  G +  V  +T ++    + GR   A+ L++E   
Sbjct: 186 TVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKG 245

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
             + P++V +N   + + K G           +K +   PD +SY++++  L K G++  
Sbjct: 246 SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSE 305

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A  +F +M     E +  +  +      +  +      E+AY++ +++ ++  +    ++
Sbjct: 306 AEELFGQM-----ETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSF 360

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             ++  LGK +K DEAL  L  A++    P + T+N +I  LC  GK+++A ++   M E
Sbjct: 361 NSILTCLGKKRKVDEALT-LFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEM-E 418

Query: 434 HAKI-PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           HA + P+  + ++++ +L + +K   A  ++  A ++G  P
Sbjct: 419 HAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNP 459



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 67/149 (44%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA  + E +  F S+K+   + +   ++ L+  L  + +   A  F+ E    GL PN 
Sbjct: 717 VKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNV 776

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ MI       +  +A  + +    NG  P+  +F  L+  +  + R  EA  V ++
Sbjct: 777 VTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEE 836

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
               GC+ N++    LL  L     +E+A
Sbjct: 837 TRLKGCRINVKACISLLDALNKAECLEQA 865


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 198/411 (48%), Gaps = 8/411 (1%)

Query: 38  STAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM 97
           ++ ES +      SL+ Q     IK   L++ ID+F  + +     SV DF  L+  +V 
Sbjct: 34  ASGESCEAGFGGESLKLQSGFHEIKG--LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVR 91

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           +   +  +  + +     +  + ++F+I+I+C+C+ +    A      +   G HP+V T
Sbjct: 92  MERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVT 151

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F  L++ LC   R+ EAL +  QM    C+PN+ T+  L+ GLC  GR+ EA  +L  + 
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE-RGVTPNVVTFNTLFNGYCKEGTP 276
            DGL+P   TY  ++DG CK G +  A+ LL +  E   + PNVV ++ + +  CK+G  
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                L   M+++   PD  +Y++++ G    G+   A  + +EM+      D    N+L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +        +E    E A +++++M  +  + +  TY  +I    K  + D A    +  
Sbjct: 332 INAF----VKEGKFFE-AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              G  P  ITFN +I   CG  +ID  + LL  M E   +   T+Y+ LI
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 181/381 (47%), Gaps = 16/381 (4%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F+E    G+ P+ +T++ MI  +C+   + +A +++  M +    P+V T+  L+N
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +  K G+  EA E+ D+M   G  PN  TY+ ++ G C   R++ A  M   +   G  P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           ++ T+  ++DG+C   R ++ MELL+E  E G+  +  T+NTL +G+   G     + LL
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-----------GFEVDERM 332
           + M      PD ++  TLL+GL   GK++ A+ +FK M +            G E D + 
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQT 513

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+ GL      E   LE A +++E+M  +  V D  TY  +I  L K  + DEA   
Sbjct: 514 YNILISGL----INEGKFLE-AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
                     P  +TF  +I   C  G++D  L L   M     + +  +Y  LI    +
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628

Query: 453 LEKSYDACALYGAALKQGVIP 473
           +     A  ++   +  GV P
Sbjct: 629 VGNINGALDIFQEMISSGVYP 649



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 214/491 (43%), Gaps = 87/491 (17%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L   +  F  I K G +  V  FN LL  L + +    A+  F +       PN  TF
Sbjct: 128 SKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHP------------------------------ 153
           + ++   C +    EA  ++D M ++G  P                              
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247

Query: 154 ------NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                 NV  ++ +++SLCK GR  +A  +  +M   G  P++ TYN ++ G C  GR  
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV----------- 256
           +A ++L  +    + PDV TY A+++ F K G+  EA EL +E + RG+           
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367

Query: 257 ------------------------TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                                   +PN++TFNTL +GYC       G+ LL  M +   +
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLV 427

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            D  +Y+TL++G    G +  A+ + +EM+  G   D    ++LL GLC  + + KD LE
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC-DNGKLKDALE 486

Query: 353 DAYQVFEKMTKKVSVTDP--------GTYGIVIRTL---GKGKKTDEALIHLHHAIEMGH 401
             ++V +K  K +  + P         TY I+I  L   GK  + +E    + H    G 
Sbjct: 487 -MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR---GI 542

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           +P TIT++++I  LC + ++D+A  +   M   +  P+  ++  LI    +  +  D   
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 462 LYGAALKQGVI 472
           L+    ++G++
Sbjct: 603 LFCEMGRRGIV 613



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 168/335 (50%), Gaps = 17/335 (5%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D   K + L     +F  +   G + ++  FN L+         +  ++ 
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E +  GL  ++ T++ +I  +    D   A  ++  M  +G  P++ T   L++ LC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 168 SGRLKEALEVLDQMGRI-----------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           +G+LK+ALE+   M +            G +P++QTYN L+ GL   G+  EA E+   +
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            + G+ PD  TY++++DG CK  R +EA ++ +    +  +PNVVTF TL NGYCK G  
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
             G+ L   M +R  + + I+Y TL+ G  K G I  A+ IF+EM+  G   D   + ++
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           L GL    W  K+ L+ A  + EK+   + ++  G
Sbjct: 658 LTGL----W-SKEELKRAVAMLEKLQMSMDLSFGG 687



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 134/304 (44%), Gaps = 41/304 (13%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           L++A+++   M R    P++  +  L+  +  + R +    +   ++   ++ D+Y++T 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++  FC   +   A+    +  + G+ P+VVTFNTL +G C E    + + L   M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C P+ ++++TL+NGL + G+I  AV++            +RMM                 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALL-----------DRMM----------------- 211

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFN 409
            ED  Q  +            TYG ++  + K   T  AL  L    E+ HI P  + ++
Sbjct: 212 -EDGLQPTQI-----------TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I +LC +G+   A  L   M E    P   +Y+ +I       +  DA  L    L++
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 470 GVIP 473
            + P
Sbjct: 320 KISP 323


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 198/386 (51%), Gaps = 6/386 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVS-DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           L E   +F+ + K+ +    S  ++ L+  L      E A +   E    G  P++ T++
Sbjct: 179 LGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 238

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           ++I+  C+     +A K++D M      PNV T+TIL++ LC+ G+++EA  V  +M + 
Sbjct: 239 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  P I T+N L+ G C  G V  A+++L  ++    KP++ TY  +M+G C+V +S +A
Sbjct: 299 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 358

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             LL   ++ G+ P+ VT+N L +G+CKEG       +   M      PD  +++ L++G
Sbjct: 359 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 418

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K G++  A  I   MV+ G  +DE    +L+ G C K  + KD+      +FE M + 
Sbjct: 419 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC-KIGKAKDVC----FLFENMVEN 473

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             +T   T+   +  LGK  K +EA   L   ++ G +P  +T   +I+  C  G+   +
Sbjct: 474 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 533

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKL 450
           L +L  M +    P+  +Y ++I  L
Sbjct: 534 LKMLERMKQAGCSPNVYTYTIIINGL 559



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 200/415 (48%), Gaps = 11/415 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+E   +   + + G   S   +  L+ A   +   + A+K   E ++    PN  
Sbjct: 211 EAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH 270

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I   C +    EA  V   M  +G  P + TF  L+N  CK G +  A ++L  M
Sbjct: 271 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 330

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +  CKPNI+TYN L++GLC V +  +A+ +L  V ++GL PD  TY  ++DGFCK G+ 
Sbjct: 331 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 390

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           N A  + N     G+ P+  TF  L +G CK G   +  G+L  M K+    D+++++ L
Sbjct: 391 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 450

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K GK +    +F+ MV           N  L  L  K ++    L +A  +  KM
Sbjct: 451 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL-GKDYK----LNEANAMLGKM 505

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K   V    T+ I+I    +  +T  +L  L    + G  P   T+  +I  LC  G++
Sbjct: 506 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV 565

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYGAALKQGVIP 473
           ++A  +LF M      P+  +Y +L+    K  +L++++    +    +K G  P
Sbjct: 566 EEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ---IVSTMVKNGCQP 617



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 178/422 (42%), Gaps = 76/422 (18%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG------------- 169
           +S ++ C    N  F A  V   M + G+      +  +VN+LCK+G             
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 170 ----------------------RLKEALEVLDQMGR-IGCKPNIQTYNCLLKGLCYVGRV 206
                                  L EA  V ++M +   C+PN  TY+ L+ GLC  GR+
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE---------------- 250
           EEA+++   +   G +P   TYT ++   C +G +++AM++L+E                
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275

Query: 251 -------------------AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
                               ++ G+ P ++TFN L NGYCKEG  +    LL +M+K NC
Sbjct: 276 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 335

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P+  +Y+ L+ GL +  K   A  + + +V  G   D    N L+ G C +       L
Sbjct: 336 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ-----L 390

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
             A+ +F  M       D  T+  +I  L K  + ++A   L   ++ G     +TF  +
Sbjct: 391 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 450

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I   C  GK      L   M E+  + +  +++  +  L +  K  +A A+ G  +K G+
Sbjct: 451 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 510

Query: 472 IP 473
           +P
Sbjct: 511 VP 512



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 166/394 (42%), Gaps = 32/394 (8%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+       +   A   F+  +S GL P+ +TF+ +I   C      +A  ++  M 
Sbjct: 377 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 436

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G   +  TFT L++  CK G+ K+   + + M    C     T+NC L  L    ++ 
Sbjct: 437 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 496

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  ML  +   GL P V T+T +++G C+ G +  ++++L    + G +PNV T+  + 
Sbjct: 497 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 556

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG C  G   +   +L  M      P+  +Y+ L+   +K G++  A  I   MV+ G +
Sbjct: 557 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 616

Query: 328 VDERMMNSLLRGLCMK--------------------SWEEKDLLEDAYQVFEKM------ 361
            +  + ++LL G  +                     S EE D    +  VF  M      
Sbjct: 617 PNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHAL 676

Query: 362 -----TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
                 KK  V     Y  ++  L K  +  EA       ++ G  P     +++I+  C
Sbjct: 677 KIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYC 735

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              K D  L  + L+ ++  +PS  SY  +I  L
Sbjct: 736 KTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGL 769



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 136/299 (45%), Gaps = 6/299 (2%)

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           LD M  +G + +   Y+ LL  L  +     A+ +   + N+G       Y  V++  CK
Sbjct: 81  LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 140

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKI 296
            G    A     + +  G   +     +L    C+     +   +  K+ K+ +C P+ +
Sbjct: 141 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSV 200

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +YS L++GL + G++  A  + +EMV  G +   R    L++  C     +  + + A +
Sbjct: 201 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKC-----DIGMTDKAMK 255

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           + ++M  K  V +  TY I+I  L +  K +EA       ++ G  P  ITFN +I   C
Sbjct: 256 MLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYC 315

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            EG +  A  LL +M +    P+  +Y+ L+  L ++ KSY A  L    +  G++P R
Sbjct: 316 KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDR 374



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 130/306 (42%), Gaps = 42/306 (13%)

Query: 57  FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           F+D + K   L E   +   + K G   SV     L+       E   ++K        G
Sbjct: 485 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 544

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
            +PN +T++I+I   CN     EA  ++  M   G  PN  T+ +LV +  K+GRL  A 
Sbjct: 545 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 604

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLC---------------------------------- 201
           +++  M + GC+PN   Y+ LL G                                    
Sbjct: 605 QIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSS 664

Query: 202 YVGR---VEEAYEMLMNVKNDGL-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
           +V R   V+ A ++   +K  G+   D+Y +  V  G CK GR  EA +L  + ++ G+ 
Sbjct: 665 HVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVV--GLCKEGRIIEADQLTQDMVKHGLF 722

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+    +++   YCK       +  +KL+     +P   SY  +++GL   G+++ A  +
Sbjct: 723 PDK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKL 781

Query: 318 FKEMVR 323
             ++VR
Sbjct: 782 VSDLVR 787



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/283 (18%), Positives = 122/283 (43%), Gaps = 39/283 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A      + + + +K+ G + +V  +  ++  L      E A       SS+G++PN +
Sbjct: 526 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 585

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN------------SLCKSG 169
           T++++++ +        A +++  M  NG  PN   ++ L++            +L  +G
Sbjct: 586 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTG 645

Query: 170 RLK-------------------------EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            L                           AL++ D++ + G  P    YN L+ GLC  G
Sbjct: 646 DLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEG 704

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R+ EA ++  ++   GL PD    +++++ +CK  + +  +E +   ++    P+  ++ 
Sbjct: 705 RIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYC 763

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            + +G   EG   +   L+  + +   + +++  +  +  L+K
Sbjct: 764 WVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMK 806


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 200/390 (51%), Gaps = 7/390 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++      N  ++A +      + G +P+  T++I+I   C++     A +  + + 
Sbjct: 129 YNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLL 188

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                P V T+TIL+ +    G + EA+++LD+M  I  +P++ TYN +++G+C  G V+
Sbjct: 189 KENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVD 248

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A++++ ++ + G  PDV TY  ++ G    G+     EL+++ + RG   NVVT++ L 
Sbjct: 249 RAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLI 308

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +  C++G   +GVGLLK MKK+   PD   Y  L+  L K G++  A+ +   M+  G  
Sbjct: 309 SSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCV 368

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    N++L  LC     ++   ++A  +FEK+ +     +  +Y  +   L       
Sbjct: 369 PDIVNYNTILACLC-----KQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK--IPSRTSYDM 445
            AL  +   ++ G  P  IT+N++I  LC +G +D+A+ LL  M   +    PS  SY++
Sbjct: 424 RALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQR 475
           ++  L ++ +  DA  +  A + +G  P  
Sbjct: 484 VLLGLCKVSRVSDAIEVLAAMVDKGCRPNE 513



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 179/361 (49%), Gaps = 7/361 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   ++  + + K+    +V  +  L+ A ++    + A+K   E     L P+ +T++ 
Sbjct: 177 LDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNS 236

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +IR  C +     A ++I  +   GY P+V T+ IL+  L   G+ +   E++  M   G
Sbjct: 237 IIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C+ N+ TY+ L+  +C  G+VEE   +L ++K  GLKPD Y Y  ++   CK GR + A+
Sbjct: 297 CEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAI 356

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+L+  I  G  P++V +NT+    CK+    + + + + + +  C P+  SY+++ + L
Sbjct: 357 EVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSAL 416

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G    A+ +  EM+  G + D    NSL+  LC        ++++A ++   M  + 
Sbjct: 417 WSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLC-----RDGMVDEAIELLVDMEMES 471

Query: 366 SVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           S   P   +Y IV+  L K  +  +A+  L   ++ G  P   T+  +I+ +   G ++ 
Sbjct: 472 SECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLND 531

Query: 424 A 424
           A
Sbjct: 532 A 532



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 160/329 (48%), Gaps = 5/329 (1%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           + +N  HP++  +  ++   C++ R+  A +VLD+M   G  P+I TYN L+  LC  G 
Sbjct: 117 ILENHGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGM 176

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++ A E    +  +  KP V TYT +++     G  +EAM+LL+E +E  + P++ T+N+
Sbjct: 177 LDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNS 236

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +  G C+EG   +   ++  +  +   PD I+Y+ LL GLL  GK      +  +MV  G
Sbjct: 237 IIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            E +    + L+  +C         +E+   + + M KK    D   Y  +I  L K  +
Sbjct: 297 CEANVVTYSVLISSVCRDGK-----VEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGR 351

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D A+  L   I  G +P  + +N ++  LC + + D+AL +   + E    P+ +SY+ 
Sbjct: 352 VDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNS 411

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQ 474
           + + L        A  +    L +GV P 
Sbjct: 412 MFSALWSTGHKVRALGMILEMLDKGVDPD 440



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 149/309 (48%), Gaps = 6/309 (1%)

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK+G   E+L  L  +   G KP++     L+ GL     +++A +++  ++N G  PD+
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
             Y A++ GFC+  R + A ++L+    +G +P++VT+N L    C  G     +     
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           + K NC P  ++Y+ L+   L  G I  A+ +  EM+    + D    NS++RG+C + +
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            ++     A+Q+   ++ K    D  TY I++R L    K +     +   +  G     
Sbjct: 247 VDR-----AFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANV 301

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           +T++ +I ++C +GK+++ + LL  M +    P    YD LI  L +  +   A  +   
Sbjct: 302 VTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDV 361

Query: 466 ALKQGVIPQ 474
            +  G +P 
Sbjct: 362 MISDGCVPD 370



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 3/205 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I++ D +  DG    + ++N +L  L      + A+  F +    G +PN+ +++ M   
Sbjct: 356 IEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSA 415

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD--QMGRIGCK 187
             +      A  +I  M D G  P+  T+  L++ LC+ G + EA+E+L   +M    CK
Sbjct: 416 LWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECK 475

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++ +YN +L GLC V RV +A E+L  + + G +P+  TYT +++G    G  N+A +L
Sbjct: 476 PSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDL 535

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCK 272
               +         +F  L+  +CK
Sbjct: 536 ATTLVNMDAISE-HSFERLYKTFCK 559


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 189/389 (48%), Gaps = 11/389 (2%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + +N L+ AL    +   A ++ S     G  P+++TF+ +I  YC       A+ + D 
Sbjct: 130 ATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDK 189

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G+  +  ++  L+   C++GR+ EALE+  ++     +P++ T+  L+KGLC   R
Sbjct: 190 MPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARR 245

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            EE   ML  +K  G +P    Y A++D +C+  ++ EA ++LNE  + G+ P  VT   
Sbjct: 246 GEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTA 305

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + N YC+EG     V + + MK + C P+  +Y+ ++ G    GK+  A+++  +M   G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            E D    N L+RG C+        +E A+++   M       D  TY ++I  L K  K
Sbjct: 366 VEPDVVTYNLLIRGQCIDGH-----IESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGK 420

Query: 386 TDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
            DEA   L   +E   I P ++TFN VI  LC  GK D A   L  M      P   +Y 
Sbjct: 421 VDEA-CSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYS 479

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
             I  L + + S +  +     L++ V P
Sbjct: 480 PFIENLCKTKGSREGLSFIDEMLQKDVKP 508



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 171/346 (49%), Gaps = 5/346 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E  +    +    G  P +  ++ ++  +C +    EA K+++ MFDNG  P   T T +
Sbjct: 247 EEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV 306

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           VN+ C+ GR+  A+ V + M   GC+PN+ TYN +++G C VG+V +A  +L  ++  G+
Sbjct: 307 VNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGV 366

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +PDV TY  ++ G C  G    A  LL      G+  +  T+N L +  CK G   +   
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACS 426

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L   ++ R   P+ ++++T++NGL K GK   A +  ++MV  G   D    +  +  LC
Sbjct: 427 LFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLC 486

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
            K+   ++ L    ++ +K  K  +V     Y IVI  L K +    A       + +G 
Sbjct: 487 -KTKGSREGLSFIDEMLQKDVKPSTV----NYTIVIDRLFKERNYGLATRIWGQMVSLGC 541

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            P  +T+   ++A C EG++ +A  ++  M +   I    +Y+ LI
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLI 587



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 153/340 (45%), Gaps = 30/340 (8%)

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
            + E A K  +E    GL P + T + ++  YC +     A +V + M   G  PNV T+
Sbjct: 279 QKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTY 338

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
             +V   C  G++ +A+ +LDQM   G +P++ TYN L++G C  G +E A+ +L  ++ 
Sbjct: 339 NAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEG 398

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +GL  D YTY  ++D  CK G+ +EA  L +    RG+ PN VTFNT+ NG CK G    
Sbjct: 399 NGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDV 458

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE--------VDE 330
               L+ M    C PD  +YS  +  L K    R  +S   EM++   +        V +
Sbjct: 459 ACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVID 518

Query: 331 RMMNSLLRGLCMKSWEE----------------------KDLLEDAYQVFEKMTKKVSVT 368
           R+      GL  + W +                      +  L +A  V  +M K   + 
Sbjct: 519 RLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIV 578

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
           D   Y  +I       KTD A+  L H   +  +P   TF
Sbjct: 579 DAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTF 618



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 163/348 (46%), Gaps = 9/348 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+FD +   G +     +  L+         + A++ F E       P+ +T + +++  
Sbjct: 185 DLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGL 240

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C+     E   ++  M + G+ P    +  LV+  C+  + +EA ++L++M   G  P  
Sbjct: 241 CDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCA 300

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            T   ++   C  GR+  A  +  ++K  G +P+V+TY A++ GFC VG+  +AM LL++
Sbjct: 301 VTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQ 360

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             E GV P+VVT+N L  G C +G       LL+LM+      D+ +Y+ L++ L K GK
Sbjct: 361 MRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGK 420

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A S+F  +   G   +    N+++ GLC     +    + A    EKM       D 
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLC-----KGGKFDVACTFLEKMVSAGCAPDT 475

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            TY   I  L K K + E L  +   ++    P T+ +  VI  L  E
Sbjct: 476 YTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKE 523



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 186/426 (43%), Gaps = 48/426 (11%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +F+S+K  G   +V  +N ++     + +   A+    +    G+ P+  T++++IR 
Sbjct: 320 VRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRG 379

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C       A +++  M  NG   +  T+ +L+++LCK+G++ EA  + D +   G +PN
Sbjct: 380 QCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPN 439

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             T+N ++ GLC  G+ + A   L  + + G  PD YTY+  ++  CK   S E +  ++
Sbjct: 440 SVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFID 499

Query: 250 EAIER-----------------------------------GVTPNVVTFNTLFNGYCKEG 274
           E +++                                   G +P+VVT+ T    YC EG
Sbjct: 500 EMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEG 559

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV-------RFGFE 327
              +   ++  MKK   + D ++Y+TL++G    GK   AV+I K M         F F 
Sbjct: 560 RLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFF 619

Query: 328 VDERMMNSLLRG--LCMKS---WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
           +  R +        + +K+   W+  + L D +++FE M K    +    Y  ++    +
Sbjct: 620 ILLRHLLQRRLAEDVPLKTTSVWKTIE-LADVFELFELMKKNSVPSSARAYLAILEGFSE 678

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
            ++ DE    + H  E         + +++   C       A  LL  M  H  +P+  S
Sbjct: 679 ERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLIS 738

Query: 443 YDMLIT 448
           Y  L++
Sbjct: 739 YQYLLS 744



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 155/333 (46%), Gaps = 14/333 (4%)

Query: 146 MFDNGYH-----PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           +F + YH     P   T+  L+ +LC+   L+ A   L  M R G +P+  T+N L+ G 
Sbjct: 115 LFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGY 174

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C   +++ A ++   +   G   D  +Y A+++GFC+ GR +EA+EL  E  +    P++
Sbjct: 175 CRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDM 230

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            T   L  G C      +G+ +L+ MK+    P   +Y+ L++   +  K   A  +  E
Sbjct: 231 YTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNE 290

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M   G         +++   C      +  +  A +VFE M  K    +  TY  +++  
Sbjct: 291 MFDNGLVPCAVTCTAVVNAYC-----REGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGF 345

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
               K  +A+  L    E G  P  +T+N +I+  C +G I+ A  LL LM  +     +
Sbjct: 346 CNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQ 405

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +Y++LI  L +  K  +AC+L+     +G+ P
Sbjct: 406 YTYNVLIDALCKTGKVDEACSLFDGLEYRGIRP 438



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/409 (22%), Positives = 162/409 (39%), Gaps = 21/409 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   +FD ++  G   +   FN ++  L    + + A  F  +  S G AP+++
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTY 476

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S  I   C      E    ID M      P+   +TI+++ L K      A  +  QM
Sbjct: 477 TYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQM 536

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +GC P++ TY   ++  C  GR+ EA  ++M +K  G+  D   Y  ++DG   +G++
Sbjct: 537 VSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKT 596

Query: 242 NEAMELLNEAIERGVTPNVVTF----NTLFNGYCKEGTPMKGVG------------LLKL 285
           + A+ +L         PN  TF      L      E  P+K               L +L
Sbjct: 597 DHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFEL 656

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           MKK +      +Y  +L G  +  ++    S+   M      ++E +  SL+   C    
Sbjct: 657 MKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFC---- 712

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            +  +  DA+ +   M     + +  +Y  ++       + D A           +    
Sbjct: 713 -KLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDE 771

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
           I +  +I  L  +G  D    ++ ++ +    PS  +Y ML  +L   E
Sbjct: 772 IVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEELSTRE 820


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 205/398 (51%), Gaps = 9/398 (2%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K  TN+    +N  L ALV  N+ +      S+  + G+  +  TF+++I+  C  +   
Sbjct: 120 KPDTNF----YNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLR 175

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
            A  +++ M ++G  P+  TFT L+    + G L  AL++  QM   GC     +   L+
Sbjct: 176 PAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLV 235

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G C  GRVEEA   ++ V  +G  PD  T+ ++++GFC++G  N+A+++++  IE+G  
Sbjct: 236 NGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFD 295

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+V T+N+L +G CK G   K + +L+ M  R C P+ ++Y+TL++ L K  +I  A  +
Sbjct: 296 PDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDL 355

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
            + +V  G   D    N+L++GLC+   ++      A ++FE+M  K    D  TY I+I
Sbjct: 356 ARILVSKGLLPDVCTFNTLIQGLCLSKNQDI-----AMEMFEEMKNKGCKPDEFTYSILI 410

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
            +L   ++  EAL+ L      G     + +N +I  LC   +I+ A  +   M      
Sbjct: 411 DSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVS 470

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            S  +Y+ LI  L + ++  +A  L    + +G+ P +
Sbjct: 471 RSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDK 508



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 207/429 (48%), Gaps = 40/429 (9%)

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
           +G    VS FN L+ AL   ++   A+    E +++GL P+  TF+ +++ +  + D   
Sbjct: 152 EGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNG 211

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A K+   M   G      +  +LVN  CK GR++EAL  + ++   G  P+  T+N L+ 
Sbjct: 212 ALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVN 271

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           G C +G V +A +++  +   G  PDVYTY +++ G CK+G   +A+E+L + I R  +P
Sbjct: 272 GFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSP 331

Query: 259 NVVTFNTLFNGYCKE-------------------------GTPMKGVGLLK--------- 284
           N VT+NTL +  CKE                          T ++G+ L K         
Sbjct: 332 NTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMF 391

Query: 285 -LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             MK + C PD+ +YS L++ L    +++ A+ + KEM   G   +  + N+L+ GLC K
Sbjct: 392 EEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLC-K 450

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           S      +EDA ++F++M          TY  +I  L K K+ +EA   +   I  G  P
Sbjct: 451 SRR----IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKP 506

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
              T+N+++   C  G I+KA  ++  M  +   P   +Y  LI  L +  +   A  L 
Sbjct: 507 DKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLL 566

Query: 464 GAALKQGVI 472
            +   +G++
Sbjct: 567 RSVQMKGIV 575



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 190/412 (46%), Gaps = 6/412 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + +DI D + + G +  V  +N L+  +  L E E A++   +      +PN+ T++ 
Sbjct: 279 VNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNT 338

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C +N+   A  +   +   G  P+V TF  L+  LC S     A+E+ ++M   G
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CKP+  TY+ L+  LCY  R++EA  +L  +++ G   +   Y  ++DG CK  R  +A 
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAE 458

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+ ++    GV+ + VT+NTL +G CK     +   L+  M      PDK +Y++LL   
Sbjct: 459 EIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYF 518

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G I  A  I + M   G E D     +L+ GLC         ++ A ++   +  K 
Sbjct: 519 CRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGR-----VDVASKLLRSVQMKG 573

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC-GEGKIDKA 424
            V  P  Y  VI+ L   K+T E +      +E    P  +T   V + LC G G I +A
Sbjct: 574 IVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEA 633

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           +     M E   +P   S+  L   L  L        L    +++  + +R+
Sbjct: 634 IDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERE 685



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 174/360 (48%), Gaps = 7/360 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           LL+ L   +  ++      +  S G  PN+ TF+ +I+ + N ++     K+++   + G
Sbjct: 61  LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELG 118

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + P+   + I +N+L +  +LK    +  +M   G   ++ T+N L+K LC   ++  A 
Sbjct: 119 FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAI 178

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            ML  + N GLKPD  T+T +M GF + G  N A+++  + +  G     V+   L NG+
Sbjct: 179 LMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGF 238

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CKEG   + +  +  + +    PD++++++L+NG  + G +  A+ I   M+  GF+ D 
Sbjct: 239 CKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDV 298

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              NSL+ G+C     EK     A ++ ++M  +    +  TY  +I  L K  + + A 
Sbjct: 299 YTYNSLISGMCKLGEFEK-----AIEILQQMILRECSPNTVTYNTLISALCKENEIEAAT 353

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                 +  G +P   TFN +IQ LC     D A+ +   M      P   +Y +LI  L
Sbjct: 354 DLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 186/417 (44%), Gaps = 46/417 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + ++   D+   +   G    V  FN L+  L +   Q+ A++ F E  + G  P+ +
Sbjct: 345 KENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEF 404

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+I   C +    EA  ++  M  +G   N   +  L++ LCKS R+++A E+ DQM
Sbjct: 405 TYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQM 464

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G   +  TYN L+ GLC   RVEEA +++  +  +GLKPD +TY +++  FC+VG  
Sbjct: 465 ELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDI 524

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A +++      G  P++ T+ TL  G C+ G       LL+ ++ +  +    +Y+ +
Sbjct: 525 EKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPV 584

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  L    + +  + +F+EM+      D      + RGLC                    
Sbjct: 585 IQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLC-------------------- 624

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                                G    EA+      +E G +P   +F  + + LC     
Sbjct: 625 -------------------NGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSME 665

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQ 478
           D  + L+ ++ E A++  R +   +I    ++ K  DA A  G     G++ ++ P+
Sbjct: 666 DTLIELINMVMEKAQMSERETS--MIRGFLKIRKFNDALANLG-----GILDRQNPK 715


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 173/338 (51%), Gaps = 5/338 (1%)

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
           S G  P+ +T++ +I   C K     AR++++ M   G  PNV T+TIL++  CK GRL+
Sbjct: 7   SVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLE 66

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           EA  VLD+M   G   N   YNCL+  LC   +V++A  M  ++ + G KPD++T+ +++
Sbjct: 67  EARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLI 126

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
            G CKV +  EA+ L  + +  GV  N +T+NTL + + + G   + + L+  M  R C 
Sbjct: 127 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCP 186

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            D I+Y+ L+  L + G I   +++F++M+  G   +    N L+ GLC         ++
Sbjct: 187 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGN-----IQ 241

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A +    M  +    D  TY  +I  L K  +  EAL         G  P  IT+N +I
Sbjct: 242 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 301

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              C EG  D A LLL    +   IP+  ++ +L++  
Sbjct: 302 SWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 339



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 174/346 (50%), Gaps = 5/346 (1%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           +S+   G    +  +N L++ L       +A +  +E    G  PN  T++I+I  +C +
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
               EAR V+D M   G   N   +  L+++LCK  ++++AL +   M   GCKP+I T+
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+ GLC V + EEA  +  ++  +G+  +  TY  ++  F + G   EA++L+N+ + 
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RG   + +T+N L    C+ G   KG+ L + M  +   P+ IS + L+NGL + G I+ 
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A+   ++M+  G   D    NSL+ GLC          ++A  +F+K+  +    D  TY
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA-----QEALNLFDKLQVEGICPDAITY 297

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
             +I    K    D+A + L   ++ G IP  +T+  ++     EG
Sbjct: 298 NTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 144/283 (50%), Gaps = 1/283 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +DR  K   L+E  ++ D +   G   +   +N L+ AL    + + A+  
Sbjct: 47  PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM 106

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F + SS G  P+ +TF+ +I   C  N F EA  +   M   G   N  T+  L+++  +
Sbjct: 107 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 166

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G ++EAL++++ M   GC  +  TYN L+K LC  G +E+   +  ++ + GL P+  +
Sbjct: 167 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 226

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
              +++G C+ G    A+E L + I RG+TP++VT+N+L NG CK G   + + L   ++
Sbjct: 227 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 286

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
                PD I+Y+TL++   K G    A  +    V  GF  +E
Sbjct: 287 VEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 329



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 110/213 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K +  +E + ++  +  +G   +   +N L+ A +     + A+K  ++    G   +  
Sbjct: 131 KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI 190

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+  C   +  +   + + M   G +PN  +  IL+N LC++G ++ ALE L  M
Sbjct: 191 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 250

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+I TYN L+ GLC  GR +EA  +   ++ +G+ PD  TY  ++   CK G  
Sbjct: 251 IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMF 310

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
           ++A  LL+  ++ G  PN VT+  L + + KEG
Sbjct: 311 DDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 124/254 (48%), Gaps = 5/254 (1%)

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G  PD++TY  ++ G CK G    A EL+NE   +G  PNV+T+  L + +CKEG   + 
Sbjct: 9   GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 68

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             +L  M  +    + + Y+ L++ L K  K++ A+++F +M   G + D    NSL+ G
Sbjct: 69  RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 128

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC     + +  E+A  +++ M  +  + +  TY  +I    +     EAL  ++  +  
Sbjct: 129 LC-----KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 183

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G     IT+N +I+ALC  G I+K L L   M      P+  S ++LI  L +      A
Sbjct: 184 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA 243

Query: 460 CALYGAALKQGVIP 473
                  + +G+ P
Sbjct: 244 LEFLRDMIHRGLTP 257



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 87/179 (48%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   ++E + + + +   G       +N L+ AL      E  +  F +  S GL PN+
Sbjct: 165 LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 224

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            + +I+I   C   +   A + +  M   G  P++ T+  L+N LCK+GR +EAL + D+
Sbjct: 225 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 284

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +   G  P+  TYN L+   C  G  ++A+ +L    + G  P+  T+  ++  F K G
Sbjct: 285 LQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 5/156 (3%)

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           + M+  G   D    N+L+ GLC K +     L  A ++  +M  K    +  TY I+I 
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGY-----LVSARELMNEMQIKGCEPNVITYTILID 57

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
              K  + +EA   L      G     + +N +I ALC + K+  AL +   M      P
Sbjct: 58  RFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP 117

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
              +++ LI  L ++ K  +A  LY   L +GVI  
Sbjct: 118 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIAN 153


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 208/414 (50%), Gaps = 12/414 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L +  D+F   ++ G   ++   N LL      N+ E     F E    G +PN +T++I
Sbjct: 194 LVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTI 253

Query: 126 MIRCYC----NKN-DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           M+  YC     KN D  +A +V++ M  NG  P V T+   ++ LC++G ++ AL ++  
Sbjct: 254 MMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRD 313

Query: 181 MGRIGCKP-NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           + RI  +P N   YN ++   C  G + EA+E+L ++++ G+ P  Y+Y+ ++DG CK G
Sbjct: 314 L-RIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKG 372

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           +  +A++L+ E ++  V P++VT+++LF+G CK G     + +   +       D ISY+
Sbjct: 373 QVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYN 432

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL+NG +    +  A  +  EM   G   +    N L+ G C     ++  L+ A +VF 
Sbjct: 433 TLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFC-----KRQRLDKALEVFT 487

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            M K     +  T  I+     +     EAL  ++   ++G +P + T+N VI+ LC E 
Sbjct: 488 IMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQ 547

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           K +KA  +L +M ++   P    Y+ LI    +      A  LY   LK G+ P
Sbjct: 548 KTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPP 601



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 187/400 (46%), Gaps = 6/400 (1%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           +P +      +D + K   +++ +D+ + + +     S+  ++ L   L      E ++ 
Sbjct: 355 SPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLS 414

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F    + G   +  +++ +I  +  + D   A K++  M  NG  PN  TF  L++  C
Sbjct: 415 MFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFC 474

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K  RL +ALEV   M ++G + NI T N +       G   EA +++  V++ G+ P+ Y
Sbjct: 475 KRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSY 534

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY  V+   CK  ++ +A E+L   ++  V P  + +NTL +GY K+  P K + L   M
Sbjct: 535 TYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKM 594

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            K    P  ++Y+ L+N      K++ A  +FKEM++ G   DE +   ++ G C     
Sbjct: 595 LKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFC----- 649

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
           +   ++ A+ ++E+M++     +  TY  +I    K K+ D+A    +        P  +
Sbjct: 650 KVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGL 709

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           T+  +I      G  D+   +   M E+   P+ T+Y  L
Sbjct: 710 TYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 181/421 (42%), Gaps = 40/421 (9%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++       E   A +   +  S+G++P ++++SI+I   C K    +A  +I+ M 
Sbjct: 326 YNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMV 385

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +   P++ T++ L + LCKSG  + +L +   +G  G K ++ +YN L+ G      + 
Sbjct: 386 QSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMG 445

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME--------------------- 246
            A +++  ++ +G  P+ +T+  ++ GFCK  R ++A+E                     
Sbjct: 446 SACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMA 505

Query: 247 --------------LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                         L+NE  + G+ PN  T+N +    CKE    K   +L +M K N  
Sbjct: 506 DEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVF 565

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P  I Y+TL++G  K      A+ ++ +M++ G        + +   + +  +  +  ++
Sbjct: 566 PCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPP-----SIVTYTMLINMFSNRSKMQ 620

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +AY +F++M KK  V D   +  +I    K      A        + G  P  +T+  +I
Sbjct: 621 EAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLI 680

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
                  ++DKA  L   M      P   +Y  LI     L  S     ++    + GV 
Sbjct: 681 DGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVF 740

Query: 473 P 473
           P
Sbjct: 741 P 741



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/433 (21%), Positives = 171/433 (39%), Gaps = 67/433 (15%)

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEAR---------------------- 140
           T   FF   S +G + + + F I+I    +     E +                      
Sbjct: 104 THTNFFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFS 163

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
            ++D   D     ++    +L+    ++  L +A +V  Q  R G + NI + N LL   
Sbjct: 164 TLLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCF 223

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK--VGRSNE---AMELLNEAIERG 255
               + E    +   +K+ G  P+V+TYT +M+ +CK   G++ +   A E+L E    G
Sbjct: 224 AEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNG 283

Query: 256 VTPNVVTFNTLFNG-----------------------------------YCKEGTPMKGV 280
            +P VVT+    +G                                   +C+ G   +  
Sbjct: 284 ESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAF 343

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            LL+ M+     P   SYS L++GL K G++  A+ + +EMV+   +      +SL  GL
Sbjct: 344 ELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGL 403

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     +  L E +  +F  +  +    D  +Y  +I      +    A   +H     G
Sbjct: 404 C-----KSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNG 458

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
            +P + TFN +I   C   ++DKAL +  +M +     +  + +++  + ++    ++A 
Sbjct: 459 SVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEAL 518

Query: 461 ALYGAALKQGVIP 473
            L       G++P
Sbjct: 519 KLINEVQDLGIVP 531


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 200/408 (49%), Gaps = 8/408 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   I + +   G     + FN L++AL   N  E A+    E +  GL+P+ +
Sbjct: 347 KNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVY 406

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I+I   C   D     ++ + M  +G  P+  T+ IL++ LC  G+L  AL++L +M
Sbjct: 407 TFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEM 466

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +  TYN ++  LC   R+EEA E+   +   G+     T+  ++DG CK  R 
Sbjct: 467 ESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRI 526

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A EL+ + ++ G+ P+ +T+N++   YCK+G   K   +L+ M       D ++Y TL
Sbjct: 527 DDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTL 586

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K G+ + A+ + + M   G     +  N +++ L       ++ L DA  +F +M
Sbjct: 587 INGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF-----RRNNLRDALSLFREM 641

Query: 362 TKKVSVTDPGTYGIVIRTLGK-GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           T+     D  TY IV R L + G    EA   L   +  G +P   +F  + + L   G 
Sbjct: 642 TEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGM 701

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
            D  +  + L+ E AK   R S    I    ++ K YDA A +G  L+
Sbjct: 702 DDYLISAIELIIEKAKF--RESDVSAIRGYLKIRKYYDALATFGRLLE 747



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 207/450 (46%), Gaps = 40/450 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           + S +K    +++ +   G    V   N L+ AL   ++  TAV    E SS+ +AP+  
Sbjct: 172 EGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDET 231

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +++ +  +     A +V   M + G  P   T  +L+N  CK GR+++AL  + + 
Sbjct: 232 TFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKE 291

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P+  TYN  +  LC  G V  A +++  +  +G  PDV+TY  V++   K G  
Sbjct: 292 IADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGEL 351

Query: 242 NEAMELLNEAIERG-----------------------------------VTPNVVTFNTL 266
           +EA  ++N+ ++RG                                   ++P+V TFN L
Sbjct: 352 DEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNIL 411

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            N  CK G P  G+ L + MK   C PD+++Y+ L++ L   GK+  A+ + KEM   G 
Sbjct: 412 INALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGC 471

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
                  N+++  LC +       +E+A +VF++M          T+  +I  L K K+ 
Sbjct: 472 PRSTVTYNTIIDALCKQMR-----IEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRI 526

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D+A   +   ++ G  P  IT+N+++   C +G + KA  +L  M  +       +Y  L
Sbjct: 527 DDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTL 586

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           I  L +  ++  A  L      +G+ P  K
Sbjct: 587 INGLCKAGRTQVALKLLRGMRIKGIRPTPK 616



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 181/385 (47%), Gaps = 5/385 (1%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N L+     +   E A+ +  +  + G  P+  T++  + C C       A KV+D M  
Sbjct: 269 NVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQ 328

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G+ P+V T+  ++N L K+G L EA  +++QM   GC P+  T+N L+  LC   R+EE
Sbjct: 329 EGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEE 388

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A ++   +   GL PDVYT+  +++  CKVG  +  + L  E    G  P+ VT+N L +
Sbjct: 389 ALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILID 448

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
             C  G  +  + LLK M+   C    ++Y+T+++ L K  +I  A  +F +M   G   
Sbjct: 449 HLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISR 508

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                N+L+ GLC     +   ++DA ++ E+M K+       TY  ++    K     +
Sbjct: 509 SAVTFNTLIDGLC-----KAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKK 563

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   L      G     +T+  +I  LC  G+   AL LL  M      P+  +Y+ +I 
Sbjct: 564 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 623

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L +     DA +L+    + G  P
Sbjct: 624 SLFRRNNLRDALSLFREMTEVGEPP 648



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 183/382 (47%), Gaps = 6/382 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + D + ++G +  V  +N ++  L    E + A    ++    G  P++ TF+ +I  
Sbjct: 320 LKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVA 379

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C++N   EA  +   +   G  P+V TF IL+N+LCK G     + + ++M   GC P+
Sbjct: 380 LCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPD 439

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L+  LC +G++  A ++L  ++++G      TY  ++D  CK  R  EA E+ +
Sbjct: 440 EVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFD 499

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +    G++ + VTFNTL +G CK         L++ M K    P  I+Y+++L    K G
Sbjct: 500 QMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQG 559

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            ++ A  I + M   GFE+D     +L+ GLC     +      A ++   M  K     
Sbjct: 560 DLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQV-----ALKLLRGMRIKGIRPT 614

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC-GEGKIDKALLLL 428
           P  Y  VI++L +     +AL       E+G  P  +T+  V + LC G G I +A   L
Sbjct: 615 PKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFL 674

Query: 429 FLMYEHAKIPSRTSYDMLITKL 450
             M     +P  +S+ ML   L
Sbjct: 675 VEMVNKGFMPEFSSFRMLAEGL 696



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 188/395 (47%), Gaps = 7/395 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G     + +N LL  L   +  +     ++E +  G+ P+  T + +I+  C  +    A
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTA 214

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             +++ M  +   P+ TTFT L+    + G ++ AL V  +M   GC P   T N L+ G
Sbjct: 215 VLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLING 274

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C +GRVE+A   +     DG +PD  TY   +   C+ G  + A+++++  ++ G  P+
Sbjct: 275 YCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPD 334

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           V T+NT+ N   K G   +  G++  M  R CLPD  +++TL+  L    ++  A+ + +
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAR 394

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           E+   G   D    N L+  LC        +     ++FE+M       D  TY I+I  
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGI-----RLFEEMKSSGCAPDEVTYNILIDH 449

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPR-TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
           L    K   AL  L   +E    PR T+T+N +I ALC + +I++A  +   M  H    
Sbjct: 450 LCSMGKLVNAL-DLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISR 508

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           S  +++ LI  L + ++  DA  L    +K+G+ P
Sbjct: 509 SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQP 543



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 179/393 (45%), Gaps = 7/393 (1%)

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           +++SD + LL AL    + E A++  + A +    AP+   +  +I+       F     
Sbjct: 51  YAISDQDRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEG 110

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCKPNIQTYNCLLKGL 200
           ++  M   G+          V S  +  R  +A++ V +Q+   G + +   YN LL  L
Sbjct: 111 LVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVL 170

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
               R++    +   + + G++PDV T   ++   C+  +   A+ +L E     V P+ 
Sbjct: 171 AEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDE 230

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            TF TL  G+ +EG+    + +   M +  C P +++ + L+NG  K G++  A+   ++
Sbjct: 231 TTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQK 290

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
            +  GFE D+   N+ +  LC         +  A +V + M ++    D  TY  VI  L
Sbjct: 291 EIADGFEPDQVTYNTFVHCLCQNGH-----VSHALKVMDLMLQEGHDPDVFTYNTVINCL 345

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K  + DEA   ++  ++ G +P T TFN +I ALC + ++++AL L   +      P  
Sbjct: 346 SKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDV 405

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++++LI  L ++   +    L+      G  P
Sbjct: 406 YTFNILINALCKVGDPHLGIRLFEEMKSSGCAP 438



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 7/234 (2%)

Query: 244 AMELLNEAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           A+++LN A+ R    P+   +  +       G      GL++ M++           + +
Sbjct: 72  ALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFV 131

Query: 303 NGLLKWGKIRPAVSIFK-EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
               +  +   AV + + ++  FG + D  + N LL  L   S     LLE    V+ +M
Sbjct: 132 ESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGS--RMKLLE---SVYNEM 186

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           T +    D  T   +I+ L +  +   A++ L         P   TF  ++Q    EG I
Sbjct: 187 TDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSI 246

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           + AL +   M E    P+R + ++LI    ++ +  DA       +  G  P +
Sbjct: 247 EAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQ 300


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 197/387 (50%), Gaps = 5/387 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+   +  N+ E A +      S G  P+  T++IMI  +C++     A ++ + + 
Sbjct: 141 YNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +   P V T+TIL+ +    G +  A+++LD+M   G +P+  TYN +++G+C    V+
Sbjct: 201 KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVD 260

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A+E+L ++ + G KPD+ TY  ++      G+ +E  +L++E I  G  PNVVT + L 
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI 320

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              C++G   + V LL+ MK++   PD   Y  L+ G  + G++  A    + M+  G  
Sbjct: 321 GTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCL 380

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    N+++ GLC     ++     A +VFEK+ +     +  +Y  +   L       
Sbjct: 381 PDIVNYNTIMAGLCRTGKADQ-----ALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRY 435

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            AL  +   +  G  P  IT+N++I  LC +G +D+A+ LL  M      P+  SY++++
Sbjct: 436 RALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIIL 495

Query: 448 TKLDQLEKSYDACALYGAALKQGVIPQ 474
             L ++ ++ DA  +  A  ++G  P 
Sbjct: 496 LGLCKVNRANDAIEVLAAMTEKGCQPN 522



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 183/350 (52%), Gaps = 5/350 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++IF+ + KD    +V  +  L+ A ++    + A+K   E  S GL P++ T++ +IR 
Sbjct: 193 LEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C +    +A +++  +   G  P++ T+ IL+ +L   G+  E  +++ +M  IGCKPN
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + T++ L+  LC  G+VEEA  +L ++K  GLKPD Y Y  ++ GFC+ GR + A E L 
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             I  G  P++V +NT+  G C+ G   + + + + + +  C P+  SY+TL + L   G
Sbjct: 373 YMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSG 432

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
               A+ +  +++  G + DE   NSL+  LC        ++++A ++   M       +
Sbjct: 433 DRYRALEMILKLLNQGIDPDEITYNSLISCLC-----RDGMVDEAIELLVDMQSGRYRPN 487

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
             +Y I++  L K  + ++A+  L    E G  P   T+  +I+ +   G
Sbjct: 488 VVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSG 537



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 43/255 (16%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E AV         GL P+++ +  +I  +C +     A + ++ M  +G  P++  +  +
Sbjct: 330 EEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTI 389

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQ------------------------------ 191
           +  LC++G+  +ALEV +++  +GC PN+                               
Sbjct: 390 MAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGI 449

Query: 192 -----TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
                TYN L+  LC  G V+EA E+L+++++   +P+V +Y  ++ G CKV R+N+A+E
Sbjct: 450 DPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIE 509

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           +L    E+G  PN  T+  L  G    G   + + L   +   N + +        +   
Sbjct: 510 VLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISE--------DSFN 561

Query: 307 KWGKIRPAVSIFKEM 321
           +  K  P + ++K++
Sbjct: 562 RLNKTFPLLDVYKDL 576


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 202/414 (48%), Gaps = 9/414 (2%)

Query: 63  ASPLKERIDIFDSIKKDGTN---WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           A  ++   D   +I++ G+     S   +N  L +L   +  E   + +S+    GL P+
Sbjct: 8   AEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPD 67

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           + T++ MI+ YC + D   A +    + + G  P   T   LV   C++G L++A  +  
Sbjct: 68  TVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFL 127

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M  +GC+ N  +Y  L++GLC    V +A  + + +K DG  P+V  +T ++ G CK G
Sbjct: 128 MMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSG 187

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R  +A  L +   + GV P+V+T+N +  GY K G     + + +LM+K  C PD  +Y+
Sbjct: 188 RVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYN 247

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL+ GL    K   A  +    V+ GF        +L+ G CM    EK   +DA ++  
Sbjct: 248 TLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA---EK--FDDALRMKN 301

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           KM       D   +G +I +L K  +  EA   L+     G +P  IT+ ++I   C  G
Sbjct: 302 KMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSG 361

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           K+D AL +L +M      P+  +Y+ L+  L + +K + A AL     K G+IP
Sbjct: 362 KVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIP 415



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 198/412 (48%), Gaps = 9/412 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + I + ++K+G +     +N L+  L    + E A +  + A   G  P   
Sbjct: 220 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVV 278

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  YC    F +A ++ + M  +    ++  F  L+NSL K  RLKEA E+L+++
Sbjct: 279 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 338

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN+ TY  ++ G C  G+V+ A E+L  ++ DG +P+ +TY ++M G  K  + 
Sbjct: 339 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 398

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++AM LL +  + G+ PNV+T+ TL  G C E        L ++M++    PD+ +Y+ L
Sbjct: 399 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 458

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            + L K G+   A S    +VR G  + +    +L+ G     + +    + A  + E+M
Sbjct: 459 TDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDG-----FSKAGNTDFAATLIERM 510

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +    D  TY +++  L K K+ +EAL  L      G       +  +I  +  EGK 
Sbjct: 511 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 570

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           D A  +   M      PS T+Y + I    +  +  DA  L     ++GV P
Sbjct: 571 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAP 622



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 192/432 (44%), Gaps = 43/432 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  +   +++   +++DG   +   +N L+  LV   +   A+   ++    G+ PN  
Sbjct: 359 KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 418

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE----- 176
           T++ +++  C+++DF  A ++ + M  NG  P+   + +L ++LCK+GR +EA       
Sbjct: 419 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK 478

Query: 177 ---------------------------VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
                                      ++++M   GC P+  TY+ LL  LC   R+ EA
Sbjct: 479 GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEA 538

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             +L  +   G+K  ++ YT ++D   + G+ + A  + NE    G  P+  T+    N 
Sbjct: 539 LPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 598

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YCKEG       L+  M++    PD ++Y+ L++G    G I  A S  K MV    E +
Sbjct: 599 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 658

Query: 330 E----RMMNSLLRG--LCMKSWEEKDL-----LEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
                 ++  LL+G    ++S +   +     L+  +Q+ E+M K        TY  +I 
Sbjct: 659 YWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIA 718

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
              K  + +EA + L H    G  P    +  +I+  C     +KAL  + +M E    P
Sbjct: 719 GFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQP 778

Query: 439 SRTSYDMLITKL 450
              SY +L+  L
Sbjct: 779 QLESYRLLVVGL 790



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 187/439 (42%), Gaps = 57/439 (12%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L + + +   ++KDG   +V  +  LL      ++ + A + F      GL P+ 
Sbjct: 393 VKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDE 452

Query: 121 WTFSIMIRCYCNKNDFFEA-----RK---------------------------VIDCMFD 148
             ++++    C      EA     RK                           +I+ M D
Sbjct: 453 HAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMID 512

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G  P+  T+++L+++LCK  RL EAL +LDQM   G K  I  Y  L+  +   G+ + 
Sbjct: 513 EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDH 572

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  M   + + G KP   TYT  ++ +CK GR  +A +L+ +    GV P+VVT+N L +
Sbjct: 573 AKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 632

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK--------------WGKIRPA 314
           G    G   +    LK M   +C P+  +Y  LL  LLK              W  I   
Sbjct: 633 GCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELD 692

Query: 315 VS--IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
           ++  + + MV+ G        +SL+ G C     +   LE+A  + + M  K    +   
Sbjct: 693 ITWQLLERMVKHGLNPTVTTYSSLIAGFC-----KAGRLEEACLLLDHMCGKGLSPNEDI 747

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA----LLLL 428
           Y ++I+     K  ++AL  +    E G  P+  ++  ++  LC EG  +K       LL
Sbjct: 748 YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 807

Query: 429 FLMYEHAKIPSRTSYDMLI 447
            L Y H ++  +   D L+
Sbjct: 808 ELGYNHDEVAWKILNDGLL 826



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 178/429 (41%), Gaps = 24/429 (5%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK   LKE  ++ + I  +G   +V  +  ++       + + A++        G  PN+
Sbjct: 323 IKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNA 382

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           WT++ ++          +A  ++  M  +G  PNV T+T L+   C       A  + + 
Sbjct: 383 WTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEM 442

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + G KP+   Y  L   LC  GR EEAY  ++     G+      YT ++DGF K G 
Sbjct: 443 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGN 499

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           ++ A  L+   I+ G TP+  T++ L +  CK+    + + +L  M  R       +Y+ 
Sbjct: 500 TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTI 559

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++ +L+ GK   A  ++ EM   G +         +   C     ++  LEDA  +  K
Sbjct: 560 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC-----KEGRLEDAEDLILK 614

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG- 419
           M ++    D  TY I+I   G     D A   L   +     P   T+  +++ L     
Sbjct: 615 MEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNL 674

Query: 420 ---------------KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
                          ++D    LL  M +H   P+ T+Y  LI    +  +  +AC L  
Sbjct: 675 AYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLD 734

Query: 465 AALKQGVIP 473
               +G+ P
Sbjct: 735 HMCGKGLSP 743



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 18/259 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L++  D+   ++++G    V  +N L+     +   + A             PN W
Sbjct: 601 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYW 660

Query: 122 TFSIMIRCYCNKNDFFEARKV-----------------IDCMFDNGYHPNVTTFTILVNS 164
           T+ ++++ +  K +    R V                 ++ M  +G +P VTT++ L+  
Sbjct: 661 TYCLLLK-HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAG 719

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
            CK+GRL+EA  +LD M   G  PN   Y  L+K  C     E+A   +  +   G +P 
Sbjct: 720 FCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQ 779

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           + +Y  ++ G C  G   +   L  + +E G   + V +  L +G  K G       +L 
Sbjct: 780 LESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLS 839

Query: 285 LMKKRNCLPDKISYSTLLN 303
           +M+KR C     +Y+ + N
Sbjct: 840 IMEKRYCCISSQTYALVTN 858


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 198/386 (51%), Gaps = 6/386 (1%)

Query: 66  LKERIDIFDSI-KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           L E   +F+ + K++    +   ++ L+  L      E A +   E    G  P++ T++
Sbjct: 245 LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 304

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           ++I+  C+     +A K++D M      PNV T+TIL++ LC+ G+++EA  V  +M + 
Sbjct: 305 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 364

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  P I T+N L+ G C  G V  A+++L  ++    KP++ TY  +M+G C+V +S +A
Sbjct: 365 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 424

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             LL   ++ G+ P+ VT+N L +G+CKEG       +   M      PD  +++ L++G
Sbjct: 425 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 484

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K G++  A  I   MV+ G  +DE    +L+ G C K  + KD+      +FE M + 
Sbjct: 485 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC-KIGKAKDVC----FLFENMVEN 539

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             +T   T+   +  LGK  K +EA   L   ++ G +P  +T   +I+  C  G+   +
Sbjct: 540 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 599

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKL 450
           L +L  M +    P+  +Y ++I  L
Sbjct: 600 LKMLERMKQAGCSPNVYTYTIIINGL 625



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 199/416 (47%), Gaps = 13/416 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+E   +   + + G   S   +  L+ A   +   + A+K   E ++    PN  
Sbjct: 277 EAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH 336

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I   C +    EA  V   M  +G  P + TF  L+N  CK G +  A ++L  M
Sbjct: 337 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 396

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +  CKPNI+TYN L++GLC V +  +A+ +L  V ++GL PD  TY  ++DGFCK G+ 
Sbjct: 397 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 456

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           N A  + N     G+ P+  TF  L +G CK G   +  G+L  M K+    D+++++ L
Sbjct: 457 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 516

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-LEDAYQVFEK 360
           ++G  K GK +    +F+ MV           N  L  L       KD  L +A  +  K
Sbjct: 517 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL------GKDYKLNEANAMLGK 570

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M K   V    T+ I+I    +  +T  +L  L    + G  P   T+  +I  LC  G+
Sbjct: 571 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 630

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYGAALKQGVIP 473
           +++A  +LF M      P+  +Y +L+    K  +L++++    +    +K G  P
Sbjct: 631 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ---IVSTMVKNGCQP 683



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 179/422 (42%), Gaps = 76/422 (18%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG------------- 169
           +S ++ C    N  F A  V   M + G+      +  +VN+LCK+G             
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 170 ----------------------RLKEALEVLDQMGR-IGCKPNIQTYNCLLKGLCYVGRV 206
                                  L EA  V ++M +   C+PN  TY+ L+ GLC  GR+
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE---------------- 250
           EEA+++   +   G +P   TYT ++   C +G +++AM++L+E                
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341

Query: 251 -------------------AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
                               ++ G+ P ++TFN L NGYCKEG  +    LL +M+K NC
Sbjct: 342 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 401

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P+  +Y+ L+ GL +  K   A  + + +V  G   D    N L+ G C     ++  L
Sbjct: 402 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC-----KEGQL 456

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
             A+ +F  M       D  T+  +I  L K  + ++A   L   ++ G     +TF  +
Sbjct: 457 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 516

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I   C  GK      L   M E+  + +  +++  +  L +  K  +A A+ G  +K G+
Sbjct: 517 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 576

Query: 472 IP 473
           +P
Sbjct: 577 VP 578



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 164/378 (43%), Gaps = 16/378 (4%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+       +   A   F+  +S GL P+ +TF+ +I   C      +A  ++  M 
Sbjct: 443 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 502

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G   +  TFT L++  CK G+ K+   + + M    C     T+NC L  L    ++ 
Sbjct: 503 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 562

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  ML  +   GL P V T+T +++G C+ G +  ++++L    + G +PNV T+  + 
Sbjct: 563 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 622

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG C  G   +   +L  M      P+  +Y+ L+   +K G++  A  I   MV+ G +
Sbjct: 623 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 682

Query: 328 VDERMMNSLLRGLCMKS-------------WEEKDLL--EDAYQVFEKMTKKVSVTDPGT 372
            +  + ++LL G  + +              + + L   E+         KK  V     
Sbjct: 683 PNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDL 742

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y  ++  L K  +  EA       ++ G  P     +++I+  C   K D  L  + L+ 
Sbjct: 743 YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKLVL 801

Query: 433 EHAKIPSRTSYDMLITKL 450
           ++  +PS  SY  +I  L
Sbjct: 802 DNKFVPSFASYCWVIHGL 819



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 6/299 (2%)

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           LD M  +G + +   Y+ LL  L  +     A+ +   + N+G       Y  V++  CK
Sbjct: 147 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 206

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKI 296
            G    A     + +  G   +     +L    C+     +   +  K+ K+ NC P+ +
Sbjct: 207 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 266

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +YS L++GL + G++  A  + +EMV  G +   R    L++  C     +  + + A +
Sbjct: 267 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKC-----DIGMTDKAMK 321

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           + ++M  K  V +  TY I+I  L +  K +EA       ++ G  P  ITFN +I   C
Sbjct: 322 MLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYC 381

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            EG +  A  LL +M +    P+  +Y+ L+  L ++ KSY A  L    +  G++P R
Sbjct: 382 KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDR 440



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 127/290 (43%), Gaps = 26/290 (8%)

Query: 57  FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           F+D + K   L E   +   + K G   SV     L+       E   ++K        G
Sbjct: 551 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 610

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
            +PN +T++I+I   CN     EA  ++  M   G  PN  T+ +LV +  K+GRL  A 
Sbjct: 611 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 670

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM----------LMNVKND------ 219
           +++  M + GC+PN   Y+ LL G         A  +          L + +ND      
Sbjct: 671 QIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSN 730

Query: 220 -----GL-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
                G+   D+Y +  V  G CK GR  EA +L  + ++ G+ P+    +++   YCK 
Sbjct: 731 EIKKCGVPTEDLYNFLVV--GLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKT 787

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
                 +  +KL+     +P   SY  +++GL   G+++ A  +  ++VR
Sbjct: 788 CKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVR 837


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 208/413 (50%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++A  L+E  + F  ++  G   S++  N LL  LV ++  E A +   E    G+  N 
Sbjct: 59  VQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNV 118

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T +IM+   C    F + +  +  M  NG + ++ T+  L+ + C+ G L+EA E+++ 
Sbjct: 119 YTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNS 178

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G KP++ TYN ++ GLC  GR   A  +L+ + N GL PD  TY  ++   C+   
Sbjct: 179 MADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDN 238

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA E+  E + +GV P++V+F++L   + +     + +   + MKK   +PD + Y+ 
Sbjct: 239 FSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 298

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G  + G +  A+ I  EM+  G  +D    N++L GLC     ++ +L DA ++F++
Sbjct: 299 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLC-----KEKMLTDADKLFDE 353

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++ ++ D  T+  +I    +     +AL       +    P  + +N +I   C  G+
Sbjct: 354 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 413

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++KA  L   M      P+  +Y +LI     +    +A  L+   +++G+ P
Sbjct: 414 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKP 466



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 200/443 (45%), Gaps = 40/443 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E  +I +S+   G   S+  +N ++  L        A     E  + GL+P++ T++ 
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 228

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF--------------------------- 158
           ++   C +++F EA+++   M   G  P++ +F                           
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288

Query: 159 --------TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
                   T+L++  C++G + EAL++ D+M   GC  ++  YN +L GLC    + +A 
Sbjct: 289 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDAD 348

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           ++   +   G  PD YT+T ++ G C+ G   +A+ L     +R + P++V +NTL +G+
Sbjct: 349 KLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGF 408

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G   K   L   M  R   P+ I+Y  L+N     G +  A  ++  M+  G +   
Sbjct: 409 CKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTL 468

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N++++G C      K     A +   +M  K    D  +Y  +I    +    D+A 
Sbjct: 469 VTCNTVIKGYCRSGDSSK-----ADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAF 523

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           + ++   + G +P  IT+N V+   C +G++ +A L+L  M E    P R++Y  LI   
Sbjct: 524 LWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGH 583

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
              +   +A   +   L++G  P
Sbjct: 584 VTQDNLNEAFRFHDEMLQRGFAP 606



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 170/369 (46%), Gaps = 5/369 (1%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            V+  +     E  +IF  + + G    +  F+ L+         + A+ +F +   +GL
Sbjct: 230 LVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGL 289

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P++  +++++  YC   +  EA K+ D M + G   +V  +  ++N LCK   L +A +
Sbjct: 290 VPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADK 349

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           + D+M   G  P+  T+  L+ G C  G + +A  +   +    +KPD+  Y  ++DGFC
Sbjct: 350 LFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFC 409

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           KVG   +A EL +  I R + PN +T+  L N YC  G   +   L  +M ++   P  +
Sbjct: 410 KVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLV 469

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           + +T++ G  + G    A      M+  G   D    N+L+ G        +D ++ A+ 
Sbjct: 470 TCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFV-----REDNMDKAFL 524

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
              KM K+  + D  TY +V+    +  +  EA + L   IE G  P   T+  +I    
Sbjct: 525 WINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHV 584

Query: 417 GEGKIDKAL 425
            +  +++A 
Sbjct: 585 TQDNLNEAF 593



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 170/394 (43%), Gaps = 40/394 (10%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
             N+  F ++IR Y       E  +    +   GY  ++     L+  L K   ++ A E
Sbjct: 45  GTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWE 104

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           V  ++ R G + N+ T N ++  LC  G+ ++    L  ++ +G+  D+ TY  ++  +C
Sbjct: 105 VHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYC 164

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + G   EA E++N   ++G+ P++ T+N + NG CK+G   +  G+L  M      PD  
Sbjct: 165 REGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTT 224

Query: 297 SYSTLL----------------NGLLKWGKIRPAVSI-------------------FKEM 321
           +Y+TLL                  +L+ G +   VS                    F++M
Sbjct: 225 TYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDM 284

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
            +FG   D  +   L+ G C       ++LE A ++ ++M ++  V D   Y  ++  L 
Sbjct: 285 KKFGLVPDNVIYTVLMHGYC----RNGNMLE-ALKIRDEMLEQGCVLDVIAYNTILNGLC 339

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K K   +A       +E G +P   TF  +I   C +G + KAL L   M +    P   
Sbjct: 340 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIV 399

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +Y+ LI    ++ +   A  L+   + + + P  
Sbjct: 400 AYNTLIDGFCKVGEMEKASELWDGMISRKIFPNH 433



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 130/269 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L +   +FD + + G       F  L+           A+  F   +   + P+  
Sbjct: 340 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIV 399

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  +C   +  +A ++ D M      PN  T+ IL+N+ C  G + EA  + D M
Sbjct: 400 AYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM 459

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP + T N ++KG C  G   +A E L  +   G+ PD  +Y  +++GF +    
Sbjct: 460 IEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNM 519

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A   +N+  + G+ P+++T+N + NG+C++G   +   +L+ M ++   PD+ +Y+ L
Sbjct: 520 DKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTAL 579

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           +NG +    +  A     EM++ GF  D+
Sbjct: 580 INGHVTQDNLNEAFRFHDEMLQRGFAPDD 608



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 114/231 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + +F ++ +      +  +N L+     + E E A + +    S  + PN  T+ I
Sbjct: 379 MTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 438

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC+     EA ++ D M + G  P + T   ++   C+SG   +A E L +M   G
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 498

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  +YN L+ G      +++A+  +  ++ +GL PD+ TY  VM+GFC+ GR  EA 
Sbjct: 499 VAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAE 558

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
            +L + IE+G+ P+  T+  L NG+  +    +       M +R   PD +
Sbjct: 559 LVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/323 (21%), Positives = 133/323 (41%), Gaps = 40/323 (12%)

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C  N   ++ L++      ++ E  E    +++ G    +    +++ G  K+     A 
Sbjct: 44  CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEG---------TPMKGVGLLKLMKKRNCL---- 292
           E+  E +  G+  NV T N + N  CK+G         + M+G G+   M   N L    
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163

Query: 293 ----------------------PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
                                 P   +Y+ ++NGL K G+   A  I  EM+  G   D 
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDT 223

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N+LL   C      +D   +A ++F +M ++  V D  ++  +I    + +  D+AL
Sbjct: 224 TTYNTLLVESC-----RRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++     + G +P  + +  ++   C  G + +AL +   M E   +    +Y+ ++  L
Sbjct: 279 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 338

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            + +   DA  L+   +++G +P
Sbjct: 339 CKEKMLTDADKLFDEMVERGALP 361


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 193/382 (50%), Gaps = 8/382 (2%)

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           L  L+   E E   +F    ++ G +P+    + +IR +C       A +++  + ++G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
             +VT++ +L++  CKSG ++EAL VLD   R+G  PN  TY+ +L  LC  G++++A +
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLD---RMGVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +L         PDV T T ++D  CK     +AM+L NE   +G  P+VVT+N L  G+C
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           K G   + +  LK +    C PD IS++ +L  L   G+   A+ +   M+R G      
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVV 322

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             N L+  LC     +K LL  A  V E M K     +  ++  +I+    GK  D A+ 
Sbjct: 323 TFNILINFLC-----QKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIE 377

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
           +L   +  G  P  +T+N ++ ALC +GK+D A+++L  +      PS  SY+ +I  L 
Sbjct: 378 YLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLL 437

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           ++ K+  A  L      +G+ P
Sbjct: 438 KVGKAELAVELLEEMCYKGLKP 459



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 199/407 (48%), Gaps = 8/407 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K    I   +++ G    V+ +N L+       E E A++        G++PN+ T+  +
Sbjct: 131 KNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDR---MGVSPNAATYDAV 187

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +   C++    +A +V+     +  +P+V T T+L+++ CK   + +A+++ ++M   GC
Sbjct: 188 LCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGC 247

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           KP++ TYN L+KG C  GR++EA   L  + + G +PDV ++  ++   C  GR  +AM+
Sbjct: 248 KPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMK 307

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           LL   + +G  P+VVTFN L N  C++G   K + +L++M K    P+  S++ L+ G  
Sbjct: 308 LLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFC 367

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
               I  A+   + MV  G   D    N LL  LC     +   ++DA  +  +++ K  
Sbjct: 368 NGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALC-----KDGKVDDAVVILSQLSSKGC 422

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                +Y  VI  L K  K + A+  L      G  P  IT  +V+  L  EGK+ +A+ 
Sbjct: 423 SPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMK 482

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               +   A  P+   Y+ +IT L + +++  A       + +G  P
Sbjct: 483 FFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKP 529



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 178/368 (48%), Gaps = 8/368 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+   L+E     + +   G +  V     L+     +   + A +        G   + 
Sbjct: 90  IRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDV 149

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++++I  YC   +  EA +V+D M   G  PN  T+  ++ SLC  G+LK+A++VL +
Sbjct: 150 TSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGR 206

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             +  C P++ T   L+   C    V +A ++   ++N G KPDV TY  ++ GFCK GR
Sbjct: 207 QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGR 266

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+  L +    G  P+V++ N +    C  G  M  + LL  M ++ CLP  ++++ 
Sbjct: 267 LDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNI 326

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+N L + G +  A+++ + M + G   + R  N L++G C         ++ A +  E 
Sbjct: 327 LINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKG-----IDRAIEYLEI 381

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +    D  TY I++  L K  K D+A++ L      G  P  I++N VI  L   GK
Sbjct: 382 MVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGK 441

Query: 421 IDKALLLL 428
            + A+ LL
Sbjct: 442 AELAVELL 449



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 164/302 (54%), Gaps = 10/302 (3%)

Query: 50  RSLQAQRFVDRI----------KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           R LQ++ + D +          K S + + + +F+ ++  G    V  +N L+       
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
             + A++F  +  SYG  P+  + ++++R  C+   + +A K++  M   G  P+V TF 
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           IL+N LC+ G L +AL VL+ M + G  PN +++N L++G C    ++ A E L  + + 
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G  PD+ TY  ++   CK G+ ++A+ +L++   +G +P+++++NT+ +G  K G     
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           V LL+ M  +   PD I+ ++++ GL + GK+R A+  F  + RF    +  + NS++ G
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITG 505

Query: 340 LC 341
           LC
Sbjct: 506 LC 507



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 131/259 (50%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +  ++ + G   SV  FN L+  L        A+        +G  PNS +F+ +I
Sbjct: 304 DAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLI 363

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           + +CN      A + ++ M   G +P++ T+ IL+ +LCK G++ +A+ +L Q+   GC 
Sbjct: 364 QGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCS 423

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++ +YN ++ GL  VG+ E A E+L  +   GLKPD+ T T+V+ G  + G+  EAM+ 
Sbjct: 424 PSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKF 483

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +      + PN   +N++  G CK       +  L  M  + C P + +Y+TL+ G+  
Sbjct: 484 FHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITY 543

Query: 308 WGKIRPAVSIFKEMVRFGF 326
            G    A  +  E+   G 
Sbjct: 544 EGLAEDASKLSNELYSRGL 562



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 73/160 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + I   +   G + S+  +N ++  L+ + + E AV+   E    GL P+  
Sbjct: 403 KDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLI 462

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T + ++     +    EA K    +      PN   +  ++  LCKS +   A++ L  M
Sbjct: 463 TCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADM 522

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
              GCKP   TY  L+KG+ Y G  E+A ++   + + GL
Sbjct: 523 VAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGL 562


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 198/386 (51%), Gaps = 6/386 (1%)

Query: 66  LKERIDIFDSI-KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           L E   +F+ + K++    +   ++ L+  L      E A +   E    G  P++ T++
Sbjct: 222 LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 281

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           ++I+  C+     +A K++D M      PNV T+TIL++ LC+ G+++EA  V  +M + 
Sbjct: 282 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 341

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  P I T+N L+ G C  G V  A+++L  ++    KP++ TY  +M+G C+V +S +A
Sbjct: 342 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 401

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             LL   ++ G+ P+ VT+N L +G+CKEG       +   M      PD  +++ L++G
Sbjct: 402 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 461

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K G++  A  I   MV+ G  +DE    +L+ G C K  + KD+      +FE M + 
Sbjct: 462 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC-KIGKAKDVC----FLFENMVEN 516

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             +T   T+   +  LGK  K +EA   L   ++ G +P  +T   +I+  C  G+   +
Sbjct: 517 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 576

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKL 450
           L +L  M +    P+  +Y ++I  L
Sbjct: 577 LKMLERMKQAGCSPNVYTYTIIINGL 602



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 199/416 (47%), Gaps = 13/416 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+E   +   + + G   S   +  L+ A   +   + A+K   E ++    PN  
Sbjct: 254 EAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH 313

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I   C +    EA  V   M  +G  P + TF  L+N  CK G +  A ++L  M
Sbjct: 314 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 373

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +  CKPNI+TYN L++GLC V +  +A+ +L  V ++GL PD  TY  ++DGFCK G+ 
Sbjct: 374 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 433

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           N A  + N     G+ P+  TF  L +G CK G   +  G+L  M K+    D+++++ L
Sbjct: 434 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 493

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-LEDAYQVFEK 360
           ++G  K GK +    +F+ MV           N  L  L       KD  L +A  +  K
Sbjct: 494 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL------GKDYKLNEANAMLGK 547

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M K   V    T+ I+I    +  +T  +L  L    + G  P   T+  +I  LC  G+
Sbjct: 548 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 607

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYGAALKQGVIP 473
           +++A  +LF M      P+  +Y +L+    K  +L++++    +    +K G  P
Sbjct: 608 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ---IVSTMVKNGCQP 660



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 178/422 (42%), Gaps = 76/422 (18%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG------------- 169
           +S ++ C    N  F A  V   M + G+      +  +VN+LCK+G             
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198

Query: 170 ----------------------RLKEALEVLDQMGR-IGCKPNIQTYNCLLKGLCYVGRV 206
                                  L EA  V ++M +   C+PN  TY+ L+ GLC  GR+
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 258

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE---------------- 250
           EEA+++   +   G +P   TYT ++   C +G +++AM++L+E                
Sbjct: 259 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 318

Query: 251 -------------------AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
                               ++ G+ P ++TFN L NGYCKEG  +    LL +M+K NC
Sbjct: 319 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 378

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P+  +Y+ L+ GL +  K   A  + + +V  G   D    N L+ G C +       L
Sbjct: 379 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ-----L 433

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
             A+ +F  M       D  T+  +I  L K  + ++A   L   ++ G     +TF  +
Sbjct: 434 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 493

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I   C  GK      L   M E+  + +  +++  +  L +  K  +A A+ G  +K G+
Sbjct: 494 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 553

Query: 472 IP 473
           +P
Sbjct: 554 VP 555



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 166/394 (42%), Gaps = 32/394 (8%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+       +   A   F+  +S GL P+ +TF+ +I   C      +A  ++  M 
Sbjct: 420 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 479

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G   +  TFT L++  CK G+ K+   + + M    C     T+NC L  L    ++ 
Sbjct: 480 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 539

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  ML  +   GL P V T+T +++G C+ G +  ++++L    + G +PNV T+  + 
Sbjct: 540 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 599

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG C  G   +   +L  M      P+  +Y+ L+   +K G++  A  I   MV+ G +
Sbjct: 600 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 659

Query: 328 VDERMMNSLLRGLCMK--------------------SWEEKDLLEDAYQVFEKM------ 361
            +  + ++LL G  +                     S EE D    +  VF  M      
Sbjct: 660 PNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHAL 719

Query: 362 -----TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
                 KK  V     Y  ++  L K  +  EA       ++ G  P     +++I+  C
Sbjct: 720 KIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYC 778

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              K D  L  + L+ ++  +PS  SY  +I  L
Sbjct: 779 KTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGL 812



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 6/299 (2%)

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           LD M  +G + +   Y+ LL  L  +     A+ +   + N+G       Y  V++  CK
Sbjct: 124 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 183

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKI 296
            G    A     + +  G   +     +L    C+     +   +  K+ K+ NC P+ +
Sbjct: 184 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 243

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +YS L++GL + G++  A  + +EMV  G +   R    L++  C     +  + + A +
Sbjct: 244 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKC-----DIGMTDKAMK 298

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           + ++M  K  V +  TY I+I  L +  K +EA       ++ G  P  ITFN +I   C
Sbjct: 299 MLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYC 358

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            EG +  A  LL +M +    P+  +Y+ L+  L ++ KSY A  L    +  G++P R
Sbjct: 359 KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDR 417



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 130/306 (42%), Gaps = 42/306 (13%)

Query: 57  FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           F+D + K   L E   +   + K G   SV     L+       E   ++K        G
Sbjct: 528 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 587

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
            +PN +T++I+I   CN     EA  ++  M   G  PN  T+ +LV +  K+GRL  A 
Sbjct: 588 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 647

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLC---------------------------------- 201
           +++  M + GC+PN   Y+ LL G                                    
Sbjct: 648 QIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSS 707

Query: 202 YVGR---VEEAYEMLMNVKNDGL-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
           +V R   V+ A ++   +K  G+   D+Y +  V  G CK GR  EA +L  + ++ G+ 
Sbjct: 708 HVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVV--GLCKEGRIIEADQLTQDMVKHGLF 765

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+    +++   YCK       +  +KL+     +P   SY  +++GL   G+++ A  +
Sbjct: 766 PDK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKL 824

Query: 318 FKEMVR 323
             ++VR
Sbjct: 825 VSDLVR 830



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/283 (18%), Positives = 122/283 (43%), Gaps = 39/283 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A      + + + +K+ G + +V  +  ++  L      E A       SS+G++PN +
Sbjct: 569 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 628

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN------------SLCKSG 169
           T++++++ +        A +++  M  NG  PN   ++ L++            +L  +G
Sbjct: 629 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTG 688

Query: 170 RLK-------------------------EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            L                           AL++ D++ + G  P    YN L+ GLC  G
Sbjct: 689 DLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEG 747

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R+ EA ++  ++   GL PD    +++++ +CK  + +  +E +   ++    P+  ++ 
Sbjct: 748 RIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYC 806

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            + +G   EG   +   L+  + +   + +++  +  +  L+K
Sbjct: 807 WVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMK 849


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 184/361 (50%), Gaps = 5/361 (1%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+  T++I+I   C ++   +A K++D M   G  P+V T+ +LVN +CK GRL EA++ 
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L+ M   G +PN+ T+N +L+ +C  GR  +A ++L  +   G  P V T+  +++  C+
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G    A+++L +    G TPN +++N L +G+CKE    + +  L++M  R C PD ++
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+T+L  L K GK+  AV +  ++   G        N+++ GL      +    + A ++
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL-----SKVGKTDQAVEL 248

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
             +M  K    D  TY  +I  L +  K +EA+   H     G  P   T+N+++  LC 
Sbjct: 249 LHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCK 308

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
             + D+A+  L  M      P+  SY +LI  +     + +A  L      +GV+ +   
Sbjct: 309 AQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSA 368

Query: 478 Q 478
           +
Sbjct: 369 E 369



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 181/365 (49%), Gaps = 40/365 (10%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + + + + D +   G    V  +N L+  +      + A+KF +   SYG  PN  T 
Sbjct: 30  SGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITH 89

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           +I++R  C+   + +A K++  M   G  P+V TF IL+N LC+ G L  A+++L++M  
Sbjct: 90  NIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPT 149

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            GC PN  +YN LL G C   +++ A + L  + + G  PD+ TY  ++   CK G+ + 
Sbjct: 150 HGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDA 209

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A+ELLN+   +G +P ++T+NT+ +G  K G   + V LL  M+ +   PD I+YS+L+ 
Sbjct: 210 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIA 269

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL + GK+  A+  F ++  FG + +    NS++ GLC                      
Sbjct: 270 GLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLC---------------------- 307

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
                             K ++TD A+  L + I  G  P  +++  +I+ +  EG   +
Sbjct: 308 ------------------KAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKE 349

Query: 424 ALLLL 428
           AL LL
Sbjct: 350 ALELL 354



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 181/333 (54%), Gaps = 5/333 (1%)

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           +V+D   +   +P+V T+TIL+ + C    + +A+++LD+MG  GCKP++ TYN L+ G+
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C  GR++EA + L ++ + G +P+V T+  ++   C  GR  +A +LL E + +G +P+V
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           VTFN L N  C++G   + + +L+ M    C P+ +SY+ LL+G  K  K+  A+   + 
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           MV  G   D    N++L  LC     +   ++ A ++  +++ K       TY  VI  L
Sbjct: 182 MVSRGCYPDIVTYNTMLTALC-----KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 236

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K  KTD+A+  LH     G  P  IT++++I  L  EGK+++A+     +      P+ 
Sbjct: 237 SKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNA 296

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +Y+ ++  L + +++  A       + +G  P
Sbjct: 297 FTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKP 329



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 143/299 (47%), Gaps = 5/299 (1%)

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           +EVLD+     C P++ TY  L++  C    V +A ++L  + + G KPDV TY  +++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK GR +EA++ LN     G  PNV+T N +    C  G  M    LL  M ++ C P 
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++++ L+N L + G +  A+ I ++M   G   +    N LL G C    +EK  ++ A
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFC----KEKK-MDRA 175

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            Q  E M  +    D  TY  ++  L K  K D A+  L+     G  P  IT+N VI  
Sbjct: 176 IQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDG 235

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L   GK D+A+ LL  M      P   +Y  LI  L +  K  +A   +      GV P
Sbjct: 236 LSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKP 294


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 180/375 (48%), Gaps = 30/375 (8%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           +   +F++E    G+ PN +T+  +IR  C    F E   ++D M   G   +V  FT+L
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ LCK+G L EA E+ D+M   G +PNI T   L+ G C  G V+ A E+   +   G 
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           K DV+TY   + G+CKVGR  +A+ + +E    GV PN+VT+N+L +  CK G       
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           ++K M +    PD ++   LL+GL K  ++  A+ +F ++V  G   D      L+ G C
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCC 441

Query: 342 M--KSWEEKDLLED----------------------------AYQVFEKMTKKVSVTDPG 371
              +  E  +LL D                            A+++  +M  K  + D  
Sbjct: 442 TSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI 501

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY I++  L K +  DEA+   +  I+ G  P  + +  +I   C   +ID+A+ L   M
Sbjct: 502 TYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREM 561

Query: 432 YEHAKIPSRTSYDML 446
           +    +P   +Y +L
Sbjct: 562 HMKNLVPDIVTYTIL 576



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 131/248 (52%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++ + +FD + ++G   ++  +N L+  L    E   A +        GL P+  
Sbjct: 337 KVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIV 396

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T  I++   C      +A  + + + ++G  P+V ++TIL++  C S R+ EA+ +L  M
Sbjct: 397 TCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDM 456

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P+I TY+CL+ GLC  GR+  A+ +L  +   G  PD  TY+ ++D   K    
Sbjct: 457 HLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHL 516

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA+ L N+ I+RG+ P+V+ +  + +GYCK     + + L + M  +N +PD ++Y+ L
Sbjct: 517 DEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTIL 576

Query: 302 LNGLLKWG 309
            N + K G
Sbjct: 577 FNAVFKSG 584



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 190/421 (45%), Gaps = 20/421 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S L   I+ F S      + S++ FN  L  L+  N+  TA+  F++           
Sbjct: 19  KTSSLPRFINSFHS------HSSLAHFNKHLTCLMKTNQHSTAIALFNQNEYNNFITPCI 72

Query: 122 TFSIMIR-CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
               +I  C+ +      +  +   +   GY  +      ++  LC +G + +ALE  D+
Sbjct: 73  ITLTIIITCFFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDE 132

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV------KNDG--LKPDVYTYTAVM 232
           +   G   N  +Y  L+ GLC  GRV EA  +L  +      + DG  +K +V  Y+ V+
Sbjct: 133 IVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVI 192

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           D  C+ G  +E  E  NE +  GV PN  T+ +L  G C  G  ++G GL+  M +R   
Sbjct: 193 DCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLD 252

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
                ++ L++GL K G +  A  +F EMV  G+E +     +L+ G C+K       ++
Sbjct: 253 VSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKG-----NVD 307

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A ++F+ + +     D  TY + I    K  +  +A+         G +P  +T+N++I
Sbjct: 308 MARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLI 367

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             LC  G++  A  ++  M+     P   +  +L+  L + ++   A  L+   ++ G+ 
Sbjct: 368 DCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLT 427

Query: 473 P 473
           P
Sbjct: 428 P 428


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 205/435 (47%), Gaps = 37/435 (8%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  +   G + +V  F  ++ AL M++E ++A     + + +G  PNS  +  +I   
Sbjct: 191 NVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHAL 250

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C  N   EA ++++ MF     P+V TF  +++ LC++GR+ EA ++LD+M   G   + 
Sbjct: 251 CENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDA 310

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKND------------------------------- 219
            TY  L+ GLC +G+V+EA  +L  + N                                
Sbjct: 311 LTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVI 370

Query: 220 -GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            G +PD YT+  ++DG  K G    A+ELLNE + +   PNV+T+  L NG+CK+G   +
Sbjct: 371 AGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEE 430

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              ++  M  +    + + Y+ L+  L K G I  A+ +F EM   G + D    NSL+ 
Sbjct: 431 AAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLIN 490

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           GLC     +   +E+A  ++  M  +  + +  TY  ++          +A   +   + 
Sbjct: 491 GLC-----KNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLF 545

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G     IT+N +I+ALC  G ++K L L   M      P+  S ++LI+ L +  K  D
Sbjct: 546 RGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVND 605

Query: 459 ACALYGAALKQGVIP 473
           A       + +G+ P
Sbjct: 606 ALKFLQDMIHRGLTP 620



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 167/333 (50%), Gaps = 5/333 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+++TF+IMI     K     A ++++ M    + PNV T+TIL+N  CK GRL+EA
Sbjct: 372 GYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEA 431

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            E+++ M   G   N   YNCL+  LC  G +EEA ++   +   G KPD+YT+ ++++G
Sbjct: 432 AEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLING 491

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK  +  EA+ L ++    GV  N VT+NTL + +    +  +   L+  M  R C  D
Sbjct: 492 LCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLD 551

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            I+Y+ L+  L K G +   + +F+EM+  G        N L+ GLC         + DA
Sbjct: 552 NITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLC-----RTGKVNDA 606

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            +  + M  +    D  TY  +I  L K     EA    +     G  P  IT+N +I  
Sbjct: 607 LKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISR 666

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            C EG  + A LLL+   +   IP+  ++ +LI
Sbjct: 667 HCHEGMFNDACLLLYKGVDSGFIPNEVTWSILI 699



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 194/418 (46%), Gaps = 37/418 (8%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N +L  LV  +    A   F +  S G++P  +TF ++++  C  ++   A  ++  M 
Sbjct: 173 YNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMA 232

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G  PN   +  L+++LC++ R+ EAL++L+ M  + C+P++QT+N ++ GLC  GR+ 
Sbjct: 233 KHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIH 292

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE----------------- 250
           EA ++L  +   G   D  TY  +M G C++G+ +EA  LLN+                 
Sbjct: 293 EAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYV 352

Query: 251 ---------------AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
                           +  G  P+  TFN + +G  K+G  +  + LL  M  +   P+ 
Sbjct: 353 ASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNV 412

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           I+Y+ L+NG  K G++  A  I   M   G  ++    N L+  LC     +   +E+A 
Sbjct: 413 ITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALC-----KDGNIEEAL 467

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           Q+F +M+ K    D  T+  +I  L K  K +EAL   H     G I  T+T+N ++ A 
Sbjct: 468 QLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAF 527

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                I +A  L+  M          +Y+ LI  L +         L+   L +G+ P
Sbjct: 528 LMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFP 585



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 169/326 (51%), Gaps = 7/326 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN ++  LV      +A++  +E  +    PN  T++I+I  +C +    EA ++++ M 
Sbjct: 380 FNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMS 439

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G   N   +  L+ +LCK G ++EAL++  +M   GCKP+I T+N L+ GLC   ++E
Sbjct: 440 AKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKME 499

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  +  ++  +G+  +  TY  ++  F       +A +L++E + RG   + +T+N L 
Sbjct: 500 EALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLI 559

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              CK G   KG+GL + M  +   P  IS + L++GL + GK+  A+   ++M+  G  
Sbjct: 560 KALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLT 619

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI-RTLGKGKKT 386
            D    NSL+ GLC         +++A  +F K+  +    D  TY  +I R   +G   
Sbjct: 620 PDIVTYNSLINGLCKMGH-----VQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFN 674

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVI 412
           D  L+ L+  ++ G IP  +T++ +I
Sbjct: 675 DACLL-LYKGVDSGFIPNEVTWSILI 699



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 137/269 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E  +I +S+   G + +   +N L+ AL      E A++ F E S  G  P+ +
Sbjct: 424 KQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIY 483

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C  +   EA  +   MF  G   N  T+  LV++      +++A +++D+M
Sbjct: 484 TFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEM 543

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +  TYN L+K LC  G VE+   +   +   G+ P + +   ++ G C+ G+ 
Sbjct: 544 LFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKV 603

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           N+A++ L + I RG+TP++VT+N+L NG CK G   +   L   ++     PD I+Y+TL
Sbjct: 604 NDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTL 663

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           ++     G    A  +  + V  GF  +E
Sbjct: 664 ISRHCHEGMFNDACLLLYKGVDSGFIPNE 692



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 168/376 (44%), Gaps = 19/376 (5%)

Query: 21  NKIPQ-----FNKLVVFAAASLSTAESLDLKEN--------PRSLQAQRFVDR-IKASPL 66
           NKIP      +N L+    AS    E+ DL  N        P +      +D  +K   L
Sbjct: 334 NKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYL 393

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
              +++ + +       +V  +  L+         E A +  +  S+ GL+ N+  ++ +
Sbjct: 394 VSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCL 453

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I   C   +  EA ++   M   G  P++ TF  L+N LCK+ +++EAL +   M   G 
Sbjct: 454 ICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGV 513

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
             N  TYN L+        +++A++++  +   G   D  TY  ++   CK G   + + 
Sbjct: 514 IANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLG 573

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L  E + +G+ P +++ N L +G C+ G     +  L+ M  R   PD ++Y++L+NGL 
Sbjct: 574 LFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLC 633

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G ++ A ++F ++   G   D    N+L+   C      + +  DA  +  K      
Sbjct: 634 KMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHC-----HEGMFNDACLLLYKGVDSGF 688

Query: 367 VTDPGTYGIVIRTLGK 382
           + +  T+ I+I  + K
Sbjct: 689 IPNEVTWSILINYIVK 704



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 151/352 (42%), Gaps = 37/352 (10%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P   ++ ++++ L      + A  V   M   G  P + T+  ++K LC V  V+ A  +
Sbjct: 168 PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSL 227

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L ++   G  P+   Y  ++   C+  R +EA++LL +       P+V TFN + +G C+
Sbjct: 228 LRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCR 287

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS---------------- 316
            G   +   LL  M  R    D ++Y  L++GL + G++  A +                
Sbjct: 288 AGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTL 347

Query: 317 ----------------IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
                           ++  MV  G+E D    N ++ GL  K +     L  A ++  +
Sbjct: 348 ISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGY-----LVSALELLNE 402

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  K    +  TY I+I    K  + +EA   ++     G    T+ +N +I ALC +G 
Sbjct: 403 MVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGN 462

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           I++AL L   M      P   +++ LI  L +  K  +A +LY     +GVI
Sbjct: 463 IEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVI 514



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/304 (22%), Positives = 125/304 (41%), Gaps = 48/304 (15%)

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL------- 248
           L+  L  VG  +   ++L  +K++GL      +  +M  + K G   +A  LL       
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVY 164

Query: 249 -----------------------------NEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
                                         + + RGV+P V TF  +    C        
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSA 224

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             LL+ M K  C+P+ + Y TL++ L +  ++  A+ + ++M     E D +  N ++ G
Sbjct: 225 CSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHG 284

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC         + +A ++ ++M  +   TD  TYG ++  L +  + DEA   L+     
Sbjct: 285 LC-----RAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN- 338

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLF-LMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
              P T+ +N +I      G+ ++A  LL+  M      P   +++++I  L  ++K Y 
Sbjct: 339 ---PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGL--VKKGYL 393

Query: 459 ACAL 462
             AL
Sbjct: 394 VSAL 397


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 202/399 (50%), Gaps = 5/399 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           I +  T   V  +N ++     +N+ E A +  +   + G  P+  T++IMI   CN+  
Sbjct: 138 ILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 197

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
              A  V+D +  +   P V T+TIL+ +    G + EA+++L++M   G  P++ TYN 
Sbjct: 198 LGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 257

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           +++G+C  G VE A E++ ++ + G +PDV +Y  ++  F   G+ +E  +L+ E   RG
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             PN VT++ L +  C+ G   + + +LK+M ++   PD  SY  L++ L K G++  A+
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            I   M+  G   D    N++L  LC      +     A ++F K+       +  +Y  
Sbjct: 378 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQ-----ALEIFNKLRGMGCPPNVSSYNT 432

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I  L        AL  +   I  G  P  IT+N++I  LC +G +++A+ LL  M +  
Sbjct: 433 MISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 492

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             P+  SY++++  L ++ +  DA  ++   +++G  P 
Sbjct: 493 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPN 531



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 170/346 (49%), Gaps = 5/346 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + D +  D    +V  +  L+ A ++      A+K   E  + GL P+ +T++ +IR 
Sbjct: 202 LTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 261

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C +     A ++I  +   G  P+V ++ IL+ +    G+  E  +++ +M   GC+PN
Sbjct: 262 MCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPN 321

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TY+ L+  LC  GR++EA  +L  +    L PD Y+Y  ++   CK GR + A+ +++
Sbjct: 322 KVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMD 381

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             I  G  P++V +NT+    CK G   + + +   ++   C P+  SY+T+++ L   G
Sbjct: 382 YMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCG 441

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
               A+ +   M+  G + DE   NSL+  LC        L+E+A  + + M +      
Sbjct: 442 DRSRALGMVPAMISKGIDPDEITYNSLISCLC-----RDGLVEEAIGLLDDMEQSGFRPT 496

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
             +Y IV+  L K ++ D+A+      IE G  P   T+  +I+ +
Sbjct: 497 VISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 169/325 (52%), Gaps = 5/325 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + + +   G    +  +N ++  +      E A +  +  +S G  P+  +++I
Sbjct: 233 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNI 292

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++R + N+  + E  K++  MF  G  PN  T++IL++SLC+ GR+ EA+ VL  M    
Sbjct: 293 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 352

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  +Y+ L+  LC  GR++ A  ++  + ++G  PD+  Y  ++   CK G +N+A+
Sbjct: 353 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 412

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+ N+    G  PNV ++NT+ +     G   + +G++  M  +   PD+I+Y++L++ L
Sbjct: 413 EIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCL 472

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G +  A+ +  +M + GF       N +L GLC     +   ++DA  +F +M +K 
Sbjct: 473 CRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC-----KVRRIDDAIGMFAEMIEKG 527

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEAL 390
              +  TY ++I  +G      EA+
Sbjct: 528 CRPNETTYILLIEGIGFAGWRTEAM 552



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 145/290 (50%), Gaps = 1/290 (0%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++  S+   G    V  +N LL A +   + +   K  +E  S G  PN  T+SI+I   
Sbjct: 273 ELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 332

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      EA  V+  M +    P+  ++  L+++LCK GRL  A+ ++D M   GC P+I
Sbjct: 333 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 392

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             YN +L  LC  G   +A E+   ++  G  P+V +Y  ++      G  + A+ ++  
Sbjct: 393 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 452

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            I +G+ P+ +T+N+L +  C++G   + +GLL  M++    P  ISY+ +L GL K  +
Sbjct: 453 MISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 512

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           I  A+ +F EM+  G   +E     L+ G+    W   + +E A  +F +
Sbjct: 513 IDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGW-RTEAMELANSLFSR 561



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 169/377 (44%), Gaps = 39/377 (10%)

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVT---------------------------------- 156
           C    F E+   ++C+ + GY P+V                                   
Sbjct: 89  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVF 148

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
            +  +++  CK  +++ A +VL++M   G  P+I TYN ++  LC   ++  A  +L  +
Sbjct: 149 AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQL 208

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
             D   P V TYT +++     G  NEAM+LL E + RG+ P++ T+N +  G CKEG  
Sbjct: 209 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 268

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            +   L+  +  + C PD ISY+ LL   L  GK      +  EM   G E ++   + L
Sbjct: 269 ERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 328

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +  LC         +++A  V + M +K    D  +Y  +I  L K  + D A+  + + 
Sbjct: 329 ISSLC-----RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 383

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           I  G +P  + +N ++ ALC  G  ++AL +   +      P+ +SY+ +I+ L      
Sbjct: 384 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 443

Query: 457 YDACALYGAALKQGVIP 473
             A  +  A + +G+ P
Sbjct: 444 SRALGMVPAMISKGIDP 460



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 155/313 (49%), Gaps = 6/313 (1%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+N  CK+G+  E+L  L+ +   G  P++     L+KG      +E+A   +M +    
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASR-VMEILESH 142

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
            +PDV+ Y AV+ GFCKV +   A ++LN    RG  P++VT+N +    C        +
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +L  +   NC+P  I+Y+ L+   +  G I  A+ + +EM+  G   D    N+++RG+
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     ++ ++E A ++   +T K    D  +Y I++R      K DE    +      G
Sbjct: 263 C-----KEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
             P  +T++ +I +LC  G+ID+A+ +L +M E    P   SYD LI+ L +  +   A 
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377

Query: 461 ALYGAALKQGVIP 473
            +    +  G +P
Sbjct: 378 GIMDYMISNGCLP 390


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 174/336 (51%), Gaps = 5/336 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN+ TF+ ++   C +   FEA +++DCM  + + P++ T   +VN LC   R+ EA
Sbjct: 155 GYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEA 214

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           ++++ +M   GC+PN  TY  +L  +C  G    A ++L  +++  +KP V TYT ++D 
Sbjct: 215 VDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDN 274

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK GR ++A+   +E   +G+  NV T+N+L   +C  G    G  LL+ M  R   P+
Sbjct: 275 LCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPN 334

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            +++S L++ L+K GK+  A  ++ EM+  G E +    NSL+ GLC         L++A
Sbjct: 335 VVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLC-----NDKRLDEA 389

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            Q+ + M  K    D  TY I+I    K K+ D+ +         G I  T+T++ +IQ 
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQG 449

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            C   K+  A  +   M      P   +Y +L+  L
Sbjct: 450 FCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGL 485



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 188/386 (48%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            N ++  L + +    AV   +   + G  PN +T+  ++   C   +   A  ++  M 
Sbjct: 198 LNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKME 257

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                P+V T+TI++++LCK GRL +AL    +M   G K N+ TYN L+   C  GR +
Sbjct: 258 HRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWD 317

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +  ++L ++    + P+V T++A++D   K G+  EA +L NE I RG+ PN +T+N+L 
Sbjct: 318 DGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLI 377

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G C +    +   ++ LM  + C PD  +Y+ L+NG  K  ++   + +F++M   G  
Sbjct: 378 YGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMI 437

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    ++L++G C    + + L+  A +VF++M  +       TY I++  L    + +
Sbjct: 438 ADTVTYSTLIQGFC----QSRKLIV-AKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELE 492

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EAL  L    +         +N +I  +C   K+D A  L   +          SY++++
Sbjct: 493 EALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIML 552

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
           + L +     +A AL+    + G  P
Sbjct: 553 SGLCKRSSLSEADALFRKMKEDGYEP 578



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 184/411 (44%), Gaps = 18/411 (4%)

Query: 24  PQFNKLVVFAAASLSTAESLDL-------KENPRSLQAQRFVDRI-KASPLKERIDIFDS 75
           P  N++      S +TA +LDL       K  P  +     +D + K   L + +  F  
Sbjct: 235 PILNRM----CKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSE 290

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++  G   +V  +N L+ +       +   +   +  +  + PN  TFS +I     +  
Sbjct: 291 METKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGK 350

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA+ + + M   G  PN  T+  L+  LC   RL EA +++D M   GC P+I TYN 
Sbjct: 351 LTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNI 410

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G C   +V++   +   +   G+  D  TY+ ++ GFC+  +   A ++  E + +G
Sbjct: 411 LINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQG 470

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           V P ++T+  L +G C  G   + +G+L  M K     D   Y+ +++G+    K+  A 
Sbjct: 471 VHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAW 530

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
           S+F  +   G + D +  N +L GLC +S      L +A  +F KM +     D  TY  
Sbjct: 531 SLFCSLPSKGVKRDIQSYNIMLSGLCKRSS-----LSEADALFRKMKEDGYEPDGCTYNT 585

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           +IR   +G     ++  +      G      T   V+  L   G++DK+ L
Sbjct: 586 LIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML-SSGELDKSFL 635



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 104/251 (41%), Gaps = 5/251 (1%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P V  +  +     +  + +  + L  +   +G+  ++ T N + N +C+          
Sbjct: 88  PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           +  + K    P+ ++++TLLNGL   G++  AV +   MV      D   +N+++ GLC+
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
                KD + +A  +  +M       +  TYG ++  + K   T  AL  L         
Sbjct: 208 -----KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIK 262

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P  +T+  +I  LC +G++D AL     M       +  +Y+ LI       +  D   L
Sbjct: 263 PHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQL 322

Query: 463 YGAALKQGVIP 473
               + + + P
Sbjct: 323 LRDMITRKITP 333



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 54/117 (46%)

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           ++M  K    D  T  I+I    + +K   A   +    ++G+ P T+TFN ++  LC E
Sbjct: 114 KQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLE 173

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           G++ +A+ L+  M     +P   + + ++  L   ++  +A  L    +  G  P +
Sbjct: 174 GRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQ 230


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 195/368 (52%), Gaps = 7/368 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F++    G  P++ TF+ + +  C K    +A    D +   G+H +  ++  L++
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIH 198

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK G  + AL++L ++     +PN+  YN ++  +C V  V EA+++   + + G+ P
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISP 258

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV TY+A++ GFC +G+  +A++L N+ I   + P+V TFN L N +CK+G   +G  + 
Sbjct: 259 DVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-M 342
            +M K+   P+ ++Y++L++G     ++  A SIF  M + G   D +  + ++ G C +
Sbjct: 319 DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKI 378

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
           K ++E      A  +F++M +K  + D  TY  +I  L K  +   AL  +    + G  
Sbjct: 379 KKFDE------AMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P   T+N+++ ALC   ++DKA+ LL    +    P  ++Y +LI  L Q  K  DA  +
Sbjct: 433 PNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKV 492

Query: 463 YGAALKQG 470
           +   L +G
Sbjct: 493 FEDLLVKG 500



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 197/391 (50%), Gaps = 7/391 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    +  +D+   +  +    +V  +N ++ ++  +     A   FSE  S G++P+  
Sbjct: 202 KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVV 261

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  +C      +A  + + M      P+V TF ILVN+ CK G++KE   V D M
Sbjct: 262 TYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G KPN  TYN L+ G C V  V +A  +   +   G+ PD+ +Y+ +++GFCK+ + 
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EAM L  E   + + P+VVT+++L +G  K G     + L+  M  R   P+  +Y+++
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSI 441

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+ L K  ++  A+++  +    GF+ D    + L++GLC     +   LEDA +VFE +
Sbjct: 442 LDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLC-----QSGKLEDARKVFEDL 496

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K    D   Y I+I+        +EAL  L    + G IP   T+  +I +L  + + 
Sbjct: 497 LVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEN 556

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           D A  LL  M   A+      YD+ +T+L Q
Sbjct: 557 DMAEKLLREMI--ARGLPLNFYDLYLTRLAQ 585



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 195/406 (48%), Gaps = 5/406 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +F+ + +  T     +FN +L +LV      T +    +    G+ PN    +I+I
Sbjct: 68  DAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 127

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
            C+C       A  V   +   GY P+  TFT L   LC  G++++A    D++  +G  
Sbjct: 128 NCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFH 187

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            +  +Y  L+ GLC VG    A ++L  V  + ++P+V  Y  ++D  CKV   NEA +L
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E + +G++P+VVT++ L +G+C  G     + L   M   N  PD  +++ L+N   K
Sbjct: 248 FSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCK 307

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK++   ++F  M++ G + +    NSL+ G C+     K     A  +F  M +    
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK-----AKSIFNTMAQGGVN 362

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  +Y I+I    K KK DEA+           IP  +T++++I  L   G+I  AL L
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +  M++    P+  +Y+ ++  L +  +   A AL      +G  P
Sbjct: 423 VDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 185/377 (49%), Gaps = 5/377 (1%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D +   G ++    +  L+  L  + E   A+          + PN   ++ +I   C  
Sbjct: 179 DKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKV 238

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
               EA  +   M   G  P+V T++ L++  C  G+LK+A+++ ++M     KP++ T+
Sbjct: 239 KLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTF 298

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+   C  G+++E   +   +   G+KP+  TY ++MDG+C V   N+A  + N   +
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
            GV P++ +++ + NG+CK     + + L K M ++N +PD ++YS+L++GL K G+I  
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISY 418

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A+ +  +M   G   +    NS+L  LC     +K     A  +  K   K    D  TY
Sbjct: 419 ALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDK-----AIALLTKFKDKGFQPDISTY 473

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
            I+I+ L +  K ++A       +  G+      +  +IQ  C EG  ++AL LL  M +
Sbjct: 474 SILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMED 533

Query: 434 HAKIPSRTSYDMLITKL 450
           +  IP   +Y+++I  L
Sbjct: 534 NGCIPDAKTYEIIILSL 550



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 158/355 (44%), Gaps = 5/355 (1%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N  ++S     + + ND  +A  + + +      P    F  ++ SL KS      L + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            +M   G KPN+   N L+   C +G +  A+ +   +   G  PD  T+T +  G C  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G+  +A    ++ +  G   + +++ TL +G CK G     + LL+ +      P+ + Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           +T+++ + K   +  A  +F EMV  G   D    ++L+ G C+        L+DA  +F
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGK-----LKDAIDLF 283

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            KM  +    D  T+ I++    K  K  E        ++ G  P  +T+N+++   C  
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +++KA  +   M +    P   SY ++I    +++K  +A  L+    ++ +IP
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIP 398



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 122/284 (42%), Gaps = 10/284 (3%)

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGL-----KPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           C++    +V +  ++++ L N   + +     K +  +Y++    F      ++A+ L N
Sbjct: 15  CVVPDSHFVPKKFQSFQFLKNTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFN 74

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             + R  TP    FN +     K       + L + M+ R   P+ ++ + L+N   + G
Sbjct: 75  RLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLG 134

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            I  A S+F ++++ G+  D     +L +GLC+K       ++ A+   +K+       D
Sbjct: 135 LIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ-----IQQAFLFHDKVVALGFHFD 189

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             +YG +I  L K  +T  AL  L         P  + +N +I ++C    +++A  L  
Sbjct: 190 QISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFS 249

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M      P   +Y  LI+    L K  DA  L+   + + + P
Sbjct: 250 EMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKP 293


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 196/370 (52%), Gaps = 5/370 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           AV    +    G  P++ TF+ +I      N   EA  +ID M   G  P++ T+  +VN
Sbjct: 170 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 229

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK G +  AL +L +M +   + N+  YN ++ GLC    +++A+++   ++  G+KP
Sbjct: 230 GLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 289

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV+TY +++   C  GR ++A  LL++ IER + PNVVTFN+L + + KEG  ++   L 
Sbjct: 290 DVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 349

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M +R+  P+ ++Y++L+NG     ++  A  IF  MV      D    N+L++G C  
Sbjct: 350 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFC-- 407

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   +E+  ++F +M+++  V +  TY  +I+ L +    D A       +  G  P
Sbjct: 408 ---KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 464

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             IT++ ++  LC  GK++KAL++   + +    P+  +Y+++I  + +  K  D   L+
Sbjct: 465 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLF 524

Query: 464 GAALKQGVIP 473
            +   +GV P
Sbjct: 525 CSLSLKGVKP 534



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 204/429 (47%), Gaps = 43/429 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + + +F  + K     S+ +F+ LL A+  +N+ +  +    +  + G+  N +T+SI
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++ C+C ++    A  V+  M   GY P++ T + L+N  C   R+ EA+ ++DQM  +G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG------ 239
            KP+  T+N L+ GL    +  EA  ++  +   G +PD++TY  V++G CK G      
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 240 -----------------------------RSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
                                          ++A +L N+   +G+ P+V T+N+L +  
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C  G       LL  M +R   P+ +++++L++   K GK+  A  +F EM++   + + 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 361

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              NSL+ G CM      D L++A Q+F  M  K  + D  TY  +I+   K K+ +E +
Sbjct: 362 VTYNSLINGFCM-----HDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGM 416

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML---I 447
                  + G +  T+T+N +IQ L   G  D A  +   M      P   +Y +L   +
Sbjct: 417 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 476

Query: 448 TKLDQLEKS 456
            K  +LEK+
Sbjct: 477 CKYGKLEKA 485



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 203/408 (49%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D + + G       FN L+  L + N+   AV       + G  P+ +T+  
Sbjct: 167 ISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 226

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C + D   A  ++  M       NV  +  +++ LCK   + +A ++ ++M   G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 286

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KP++ TYN L+  LC  GR  +A  +L ++    + P+V T+ +++D F K G+  EA 
Sbjct: 287 IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAE 346

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L +E I+R + PN+VT+N+L NG+C      +   +  LM  ++CLPD ++Y+TL+ G 
Sbjct: 347 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGF 406

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++   + +F+EM + G   +    N+L++GL    ++  D  + A ++F+KM    
Sbjct: 407 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL----FQAGD-CDMAQKIFKKMVSDG 461

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY I++  L K  K ++AL+   +  +    P   T+N +I+ +C  GK++   
Sbjct: 462 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGW 521

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L   +      P+   Y  +I+   +     +A AL+    + G +P
Sbjct: 522 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 569



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 211/442 (47%), Gaps = 15/442 (3%)

Query: 26  FNKLV--VFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDI------FDSIK 77
           FN L+  +F     S A +L  +   R  Q   F      + L +R DI         ++
Sbjct: 189 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 248

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K     +V  +N ++  L      + A   F++  + G+ P+ +T++ +I C CN   + 
Sbjct: 249 KGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWS 308

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +A +++  M +   +PNV TF  L+++  K G+L EA ++ D+M +    PNI TYN L+
Sbjct: 309 DASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 368

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G C   R++EA ++   + +    PDV TY  ++ GFCK  R  E MEL  E  +RG+ 
Sbjct: 369 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 428

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            N VT+NTL  G  + G       + K M      PD I+YS LL+GL K+GK+  A+ +
Sbjct: 429 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 488

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F+ + +   E +    N ++ G+C     +   +ED + +F  ++ K    +   Y  +I
Sbjct: 489 FEYLQKSKMEPNIYTYNIMIEGMC-----KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 543

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               +    +EA        E G +P +  +N +I+A   +G    +  L+  M     +
Sbjct: 544 SGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFV 603

Query: 438 PSRTSYDMLITKLD--QLEKSY 457
              ++  M+I  L   +LEKSY
Sbjct: 604 GDASTISMVINMLHDGRLEKSY 625



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 173/366 (47%), Gaps = 8/366 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  D+F+ ++  G    V  +N L+  L        A +  S+     + PN  
Sbjct: 268 KYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVV 327

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +  +    EA K+ D M      PN+ T+  L+N  C   RL EA ++   M
Sbjct: 328 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 387

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C P++ TYN L+KG C   RVEE  E+   +   GL  +  TY  ++ G  + G  
Sbjct: 388 VSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 447

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A ++  + +  GV P+++T++ L +G CK G   K + + + ++K    P+  +Y+ +
Sbjct: 448 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIM 507

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G+ K GK+     +F  +   G + +  +  +++ G C      K L E+A  +F +M
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC-----RKGLKEEADALFREM 562

Query: 362 TKKVSVTDPGTYGIVIRT-LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            +  ++ D G Y  +IR  L  G K   A + +      G +    T + VI  L  +G+
Sbjct: 563 KEDGTLPDSGCYNTLIRARLRDGDKAASAEL-IKEMRSCGFVGDASTISMVINML-HDGR 620

Query: 421 IDKALL 426
           ++K+ L
Sbjct: 621 LEKSYL 626



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 157/339 (46%), Gaps = 40/339 (11%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +L +A+ +  +M +    P+I  ++ LL  +  + + +    +   ++N G+  + YTY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC-----KEGTPM------- 277
            +++ FC+  +   A+ +L + ++ G  P++VT ++L NGYC      E   +       
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 278 -----------------------KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
                                  + V L+  M  R C PD  +Y T++NGL K G I  A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           +S+ K+M +   E +  + N+++ GLC     +   ++DA+ +F KM  K    D  TY 
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLC-----KYKHMDDAFDLFNKMETKGIKPDVFTYN 295

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            +I  L    +  +A   L   IE    P  +TFN++I A   EGK+ +A  L   M + 
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 355

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +  P+  +Y+ LI      ++  +A  ++   + +  +P
Sbjct: 356 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 394


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 202/451 (44%), Gaps = 62/451 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+S   E +++ D ++  G   ++  +N ++  +      + A +  +  SSYG  P+  
Sbjct: 199 KSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIV 258

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +++  C    + + + +   M D    PN  TF +LV   C+ G ++ A++VL QM
Sbjct: 259 SYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM 318

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC PN    N ++  +C  GRV++AY+ L N+   G  PD  +YT V+ G C+ GR 
Sbjct: 319 SQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRW 378

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL--------- 292
             A ELL E + +   PN VTFNT     C++G   + + L++LM +  C          
Sbjct: 379 EHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNAL 438

Query: 293 -----------------------PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
                                  P+ I+Y+TLL GL    ++  A  +  EM++    ++
Sbjct: 439 VHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLN 498

Query: 330 ERMMNSLLRGLCMKSWEEKDL------------------------------LEDAYQVFE 359
               N L+   C K + E+ +                               E+A ++  
Sbjct: 499 AVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLH 558

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            +  K    D  TY  V+  L +  +T+EA+  LH   +MG  P+   +N ++ ALC   
Sbjct: 559 GLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRC 618

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           + D+A+     M  +  +P+ ++Y +LI  L
Sbjct: 619 ETDQAIDFFAYMVSNGCMPNESTYIILIEGL 649



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 166/335 (49%), Gaps = 11/335 (3%)

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
           R     M   G  P+V T+T+L+ ++CKS    EA+ VLD+M   GC PNI TYN ++ G
Sbjct: 172 RSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIING 231

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           +C  GRV++A E+L  + + G +PD+ +YT V+ G C   R ++   L  E +++   PN
Sbjct: 232 MCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPN 291

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VTF+ L   +C+ G   + + +L+ M +  C P+    + ++N + K G++  A     
Sbjct: 292 EVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN 351

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
            M  +G   D     ++LRGLC    WE       A ++  +M +K    +  T+   I 
Sbjct: 352 NMGMYGCNPDTISYTTVLRGLCRAGRWEH------AKELLPEMVRKNCPPNEVTFNTFIC 405

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L +    ++A+  +    E G     +T+N ++   C +G++D AL L   +      P
Sbjct: 406 ILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---P 462

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +  +Y  L+T L   E+  DA A   A + Q   P
Sbjct: 463 NTITYTTLLTGLCHAER-LDAAAELLAEMIQKDCP 496



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 174/359 (48%), Gaps = 8/359 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+  T+++++   C  + F EA  V+D M   G  PN+ T+ +++N +C+ GR+ +A
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            E+L+++   G +P+I +Y  +LKGLC   R ++   +   + +    P+  T+  ++  
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 301

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           FC+ G    A+++L +  + G TPN    N + N  CK+G        L  M    C PD
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ISY+T+L GL + G+   A  +  EMVR     +E   N+ +  LC     +K L+E A
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILC-----QKGLIEQA 416

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++ E M +        TY  ++       + D AL   ++   +   P TIT+  ++  
Sbjct: 417 IKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN---LPCEPNTITYTTLLTG 473

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LC   ++D A  LL  M +     +  ++++L++   Q     +A  L    ++ G  P
Sbjct: 474 LCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 189/394 (47%), Gaps = 9/394 (2%)

Query: 40  AESLDLKENPRSLQAQRFVDRIKASPLKER-IDIFDSIKKDGTNWSVSDFNDLLMALVML 98
           AE +D K  P  +     V       + ER I +   + + G   + +  N ++ A+   
Sbjct: 281 AEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQ 340

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
              + A  F +    YG  P++ +++ ++R  C    +  A++++  M      PN  TF
Sbjct: 341 GRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTF 400

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
              +  LC+ G +++A+++++ M   GC   I TYN L+ G C  GRV+ A E+  N+  
Sbjct: 401 NTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP- 459

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
              +P+  TYT ++ G C   R + A ELL E I++    N VTFN L + +C++G   +
Sbjct: 460 --CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEE 517

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            + L+  M +  C P+ I+++TLL+G+ K      A+ +   +V  G  +D    +S++ 
Sbjct: 518 AMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVD 577

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
            L       +D  E+A Q+   +         G Y  ++  L K  +TD+A+    + + 
Sbjct: 578 VL-----SREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVS 632

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
            G +P   T+  +I+ L  EG + +A  +L  +Y
Sbjct: 633 NGCMPNESTYIILIEGLAHEGLLKEARYVLSELY 666



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 152/336 (45%), Gaps = 8/336 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D  +++   G N     +  +L  L      E A +   E       PN  TF+  I   
Sbjct: 348 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICIL 407

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C K    +A K+I+ M + G    + T+  LV+  C  GR+  ALE+ + +    C+PN 
Sbjct: 408 CQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNT 464

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  LL GLC+  R++ A E+L  +       +  T+  ++  FC+ G   EAMEL+N+
Sbjct: 465 ITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQ 524

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +E G TPN++TFNTL +G  K+    + + LL  +  +    D I+YS++++ L +  +
Sbjct: 525 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDR 584

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
              A+ +   +   G      M N +L  LC +   ++     A   F  M     + + 
Sbjct: 585 TEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQ-----AIDFFAYMVSNGCMPNE 639

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
            TY I+I  L       EA   L      G + +++
Sbjct: 640 STYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSL 675



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 132/260 (50%), Gaps = 3/260 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ I + + + + G +  +  +N L+    +    ++A++ F+   +    PN+ T++ 
Sbjct: 413 IEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN---NLPCEPNTITYTT 469

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C+      A +++  M       N  TF +LV+  C+ G ++EA+E+++QM   G
Sbjct: 470 LLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG 529

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN+ T+N LL G+      EEA E+L  + + G+  D  TY++V+D   +  R+ EA+
Sbjct: 530 CTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAI 589

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++L+   + G+ P V  +N +    CK     + +     M    C+P++ +Y  L+ GL
Sbjct: 590 QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 649

Query: 306 LKWGKIRPAVSIFKEMVRFG 325
              G ++ A  +  E+   G
Sbjct: 650 AHEGLLKEARYVLSELYAKG 669


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 210/438 (47%), Gaps = 47/438 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + +  ++ D +K+ G    V   + L+  L      + A++ F        +PN  
Sbjct: 123 KAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVI 181

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCM-----FDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           T++ ++   C  N   EA ++ D M       +G  P+V +++ ++++LCK+ R+ +A E
Sbjct: 182 TYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYE 241

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL--------------- 221
              +M  +GC PN+ TY+ L+ GLC V R  E  E+L+++K  G                
Sbjct: 242 YFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALW 301

Query: 222 --------------------KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
                               KP+V TY   + G CK GR +EA  +L E +E  VTP+V+
Sbjct: 302 KNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVI 361

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T++++ +G+CK G   K   +   M    C+P  +++ TLL+G  +  K R A  + ++M
Sbjct: 362 TYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDM 421

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           V  GF    +  N L+  +C       D +E A +++ KM +K    D  TY  +I+ L 
Sbjct: 422 VNAGFIPGLQTYNVLMDCVC-----GADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLC 476

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           + ++ DEA   L        +P     + +++ LC +G++D+A  +L  + E    P   
Sbjct: 477 RARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGE 536

Query: 442 SYDMLITKLDQLEKSYDA 459
           ++ +L+ +L  L K ++A
Sbjct: 537 TFKILVEEL-YLRKKWEA 553



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 195/385 (50%), Gaps = 12/385 (3%)

Query: 95  LVMLNEQETAVKFFSEASSY-GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
           L  + + + A  FF  A +  G   N++T ++++  +       EA +++    +    P
Sbjct: 50  LQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFP 109

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N   +T ++N  CK+G++ +A E+LD+M   G K ++  ++ L++GLC  GR++EA E  
Sbjct: 110 NEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQF 169

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-----GVTPNVVTFNTLFN 268
            ++  +   P+V TY  V++G CK  R +EA+EL ++  +R     G  P+V++++T+ +
Sbjct: 170 KSMGEE-CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVID 228

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
             CK     K     K M+   C P+ ++YS+L++GL K  +    + +   M   GF +
Sbjct: 229 ALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGI 288

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +    N++L  L    W + D  E A Q FE++ K     +  TY + +  L K  + DE
Sbjct: 289 NIIDFNAMLHAL----W-KNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDE 343

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   L   +E    P  IT++++I   C  G++DKA  +   M  H  IP   ++  L+ 
Sbjct: 344 AYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLH 403

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
              + +KS +A  ++   +  G IP
Sbjct: 404 GFSEHKKSREAFRVHEDMVNAGFIP 428



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 185/423 (43%), Gaps = 46/423 (10%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           LL A V     E A +   E       PN   ++ +I  +C      +A +++D M + G
Sbjct: 82  LLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERG 141

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +V   + L+  LC+ GR+ EALE    MG   C PN+ TYN ++ GLC   R++EA 
Sbjct: 142 VKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVVNGLCKANRIDEAL 200

Query: 211 EMLMNVK-----NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           E+  +++     + G +PDV +Y+ V+D  CK  R ++A E        G  PNVVT+++
Sbjct: 201 ELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSS 260

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKR---------NCL------------------------ 292
           L +G CK   P + + LL  MK++         N +                        
Sbjct: 261 LIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 320

Query: 293 --PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             P+ ++Y+  ++GL K G++  A  I  EMV      D    +S++ G C     +K  
Sbjct: 321 KKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDK-- 378

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
              A  VF +M     +  P T+  ++    + KK+ EA       +  G IP   T+N 
Sbjct: 379 ---ADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNV 435

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           ++  +CG   ++ AL +   M    + P   +Y  LI  L +  +  +A           
Sbjct: 436 LMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADN 495

Query: 471 VIP 473
           V+P
Sbjct: 496 VVP 498



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 165/422 (39%), Gaps = 72/422 (17%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E +++   +K+ G   ++ DFN +L AL   +EQE A +FF      G  PN  T+++ +
Sbjct: 273 ECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAV 332

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL---------------- 171
              C      EA +++  M ++   P+V T++ +++  CK+GR+                
Sbjct: 333 HGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECI 392

Query: 172 -------------------KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
                              +EA  V + M   G  P +QTYN L+  +C    VE A E+
Sbjct: 393 PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEI 452

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +K    +PD  TY  ++   C+  R +EA E L+      V PN    + L    CK
Sbjct: 453 YHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCK 512

Query: 273 EGTPMKGVGLL--------------------------------KLMKKRNCLPDKISYST 300
           +G   +   +L                                KL++    + D  +YS 
Sbjct: 513 QGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSL 572

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
            +  + K GK   AV + ++MV  G   DE    ++LR LC       D +E A   FEK
Sbjct: 573 CVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLC-----GLDRVESAIAEFEK 627

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +       TY ++I         DEA       +  G  P+  T   +   L   G 
Sbjct: 628 MASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGY 687

Query: 421 ID 422
            D
Sbjct: 688 QD 689



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 106/482 (21%), Positives = 204/482 (42%), Gaps = 67/482 (13%)

Query: 62  KASPLKERIDIFDSIKK-----DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           KA+ + E +++FD ++K      G    V  ++ ++ AL      + A ++F    + G 
Sbjct: 192 KANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGC 251

Query: 117 APNSWTFSIMIRCYCN----------------------------------KNDFFE-ARK 141
           APN  T+S +I   C                                   KND  E A +
Sbjct: 252 APNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 311

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
             + +  +G  PNV T+ + V+ LCK+GR+ EA  +L +M      P++ TY+ ++ G C
Sbjct: 312 FFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFC 371

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             GR+++A ++   +      P   T+  ++ GF +  +S EA  +  + +  G  P + 
Sbjct: 372 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 431

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+N L +  C   +    + +   MK++   PD  +Y+ L+  L +  ++  A      M
Sbjct: 432 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVM 491

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEE---------------------KDLLEDAY--QVF 358
                  +  + ++L+  LC +   +                     K L+E+ Y  + +
Sbjct: 492 EADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKW 551

Query: 359 EKMTKKVS----VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           E  +K +     V D  TY + +  + K  K DEA+  +   +  G  P   T+  V+++
Sbjct: 552 EAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRS 611

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           LCG  +++ A+     M      P   +Y +LI +    + + +A  ++ A +  G  PQ
Sbjct: 612 LCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQ 671

Query: 475 RK 476
            +
Sbjct: 672 AQ 673



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 5/285 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           +E   + + +   G    +  +N L+  +   +  E+A++ + +       P+  T++ +
Sbjct: 412 REAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPL 471

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I+C C      EA++ +D M  +   PN      LV  LCK G + EA  VLD +  +GC
Sbjct: 472 IQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGC 531

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +P  +T+  L++ L    + E A ++L   ++ G   D  TY+  +   CK G+ +EA+E
Sbjct: 532 QPLGETFKILVEELYLRKKWEAASKLL---RSPGFVADAATYSLCVAEICKAGKPDEAVE 588

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           ++ + + +GV P+  T+  +    C        +   + M  R C P  ++Y+ L+    
Sbjct: 589 VIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEAC 648

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
                  A  IF+ MV  GF    + M +L    C++    +DLL
Sbjct: 649 SADMADEAFRIFEAMVAAGFTPQAQTMRTL--SSCLRDAGYQDLL 691



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 32/236 (13%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  ++  ++I+  +K+       + +  L+  L      + A +F     +  + PN   
Sbjct: 443 ADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAI 502

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL----------------- 165
              ++   C + +  EA  V+D + + G  P   TF ILV  L                 
Sbjct: 503 CHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPG 562

Query: 166 ---------------CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
                          CK+G+  EA+EV++QM   G +P+  TY  +L+ LC + RVE A 
Sbjct: 563 FVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAI 622

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                + + G  P + TYT ++   C    ++EA  +    +  G TP   T  TL
Sbjct: 623 AEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 182/337 (54%), Gaps = 5/337 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++D + K+G    V  FN L+  L       +AV   ++ S+ G  PN  T++ ++  +C
Sbjct: 367 LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFC 426

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            KN   EA  V++ M   G+  N+  + +L+ +LCK+G++ +AL++L +M   GCKP+I 
Sbjct: 427 KKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIF 486

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+N L+ GLC V R E+A  +  ++  DG+  +  TY  ++  F + G   EA++L+N+ 
Sbjct: 487 TFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDM 546

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           + RG   + +T+N L   +CK G   K +GL   M +++ +P  IS + L+NGL + GK+
Sbjct: 547 LFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKV 606

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ + ++M+  G   D    NSL+ GLC     +   + +A+ +F K+  +    D  
Sbjct: 607 CNALELLRDMIHRGLAPDVVTYNSLINGLC-----KMGNIREAFNLFNKLQAEGIQPDAI 661

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
           TY  +I    +    D+A + L   +E   IP  +T+
Sbjct: 662 TYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTW 698



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 206/452 (45%), Gaps = 62/452 (13%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +   +N +L  LV  N    A   F E  S G+ P  +TF ++++  C  N+   A  ++
Sbjct: 172 TFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLL 231

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M  +G  PN   +  L+++L K  R+ EAL++L++M  +GC P++ T+N ++ GLC +
Sbjct: 232 RDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRL 291

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA------------ 251
            R+ E  +++  +   G  P+  TY  +M+G C+VG+ +EA  LLN+             
Sbjct: 292 NRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILI 351

Query: 252 --------------------IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
                               I+ G  P+V TFNTL +G CK+G     V ++  M    C
Sbjct: 352 NGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGC 411

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK--D 349
            P+ I+Y+TLL+G  K  ++  A  +  EM   GFE++    N LLR LC      K  D
Sbjct: 412 TPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALD 471

Query: 350 LL----------------------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +L                            EDA  ++  M     + +  TY  +I    
Sbjct: 472 MLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFL 531

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           +G    EAL  ++  +  G     IT+N +I+A C  G  +KAL L   M     +PS  
Sbjct: 532 RGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNI 591

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           S ++LI  L ++ K  +A  L    + +G+ P
Sbjct: 592 SCNLLINGLCRVGKVCNALELLRDMIHRGLAP 623



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 204/427 (47%), Gaps = 11/427 (2%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+  Q  +  + K   + E + + + +   G    V  FND++  L  LN      K 
Sbjct: 241 PNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKL 300

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
                  G  PN  T+ +++   C      EA+     + +    PN   FTIL+N   K
Sbjct: 301 VDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQ----VLLNKVPTPNDVHFTILINGYVK 356

Query: 168 SGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           SGRL EA   L D+M + GC+P++ T+N L+ GLC  G +  A +M+ ++  +G  P++ 
Sbjct: 357 SGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLI 416

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYT ++DGFCK  +  EA  +LNE   +G   N++ +N L    CK G   K + +L  M
Sbjct: 417 TYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEM 476

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
             + C PD  +++TL+ GL K  +   A++++++M+  G   +    N+L+      ++ 
Sbjct: 477 SDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIH-----AFL 531

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
               +++A ++   M  +    D  TY  +I+   K   T++AL      +    +P  I
Sbjct: 532 RGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNI 591

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           + N +I  LC  GK+  AL LL  M      P   +Y+ LI  L ++    +A  L+   
Sbjct: 592 SCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKL 651

Query: 467 LKQGVIP 473
             +G+ P
Sbjct: 652 QAEGIQP 658



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 199/419 (47%), Gaps = 12/419 (2%)

Query: 57  FVDRIKASPLKERID-IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS-Y 114
            +D++ A+   + ID +   IK++G  +  S F  ++      N    A +   +    Y
Sbjct: 108 LIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVY 167

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
              P   ++++++    + N    A  V   M   G  P V TF +++ +LC    +  A
Sbjct: 168 CCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNA 227

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
             +L  M + GC PN   Y  L+  L    RV EA ++L  +   G  PDV T+  V+ G
Sbjct: 228 CSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYG 287

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            C++ R +E  +L++  + RG TPN +T+  L NG C+ G   +   LL  +      P+
Sbjct: 288 LCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PN 343

Query: 295 KISYSTLLNGLLKWGKIRPAVS-IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
            + ++ L+NG +K G++  A + ++ +M++ G   D    N+L+ GLC     +K L+  
Sbjct: 344 DVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLC-----KKGLMGS 398

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A  +   M+      +  TY  ++    K  + +EA   L+     G     + +N +++
Sbjct: 399 AVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLR 458

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           ALC  GK+ KAL +L  M +    P   +++ LI  L ++++  DA ALY   L  GVI
Sbjct: 459 ALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVI 517



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 124/241 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + L+E   + + +   G   ++  +N LL AL    +   A+    E S  G  P+ +
Sbjct: 427 KKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIF 486

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C  +   +A  +   M  +G   N  T+  L+++  + G ++EAL++++ M
Sbjct: 487 TFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDM 546

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +  TYN L+K  C +G  E+A  +   +    L P   +   +++G C+VG+ 
Sbjct: 547 LFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKV 606

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+ELL + I RG+ P+VVT+N+L NG CK G   +   L   ++     PD I+Y+TL
Sbjct: 607 CNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTL 666

Query: 302 L 302
           +
Sbjct: 667 I 667



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 127/246 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + +D+   +   G    +  FN L+  L  ++ +E A+  + +    G+  N+ 
Sbjct: 462 KNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTV 521

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +       EA K+++ M   G   +  T+  L+ + CK G  ++AL + D+M
Sbjct: 522 TYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEM 581

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R    P+  + N L+ GLC VG+V  A E+L ++ + GL PDV TY ++++G CK+G  
Sbjct: 582 VRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNI 641

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L N+    G+ P+ +T+NTL   +C+ G       LL    +   +P+ +++  L
Sbjct: 642 REAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYIL 701

Query: 302 LNGLLK 307
           ++  +K
Sbjct: 702 VSNFIK 707



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 129/271 (47%), Gaps = 2/271 (0%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           ++ + ++  +  DG   +   +N L+ A +     + A+K  ++    G   +  T++ +
Sbjct: 502 EDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGL 561

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I+ +C      +A  + D M      P+  +  +L+N LC+ G++  ALE+L  M   G 
Sbjct: 562 IKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGL 621

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P++ TYN L+ GLC +G + EA+ +   ++ +G++PD  TY  ++   C+ G  ++A  
Sbjct: 622 APDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYL 681

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV--GLLKLMKKRNCLPDKISYSTLLNG 304
           LL   +E    PN VT+  L + + KE     G+  G  K++         I    +L+ 
Sbjct: 682 LLLRGVENAFIPNDVTWYILVSNFIKEIGKENGISFGTAKVIPSICIQVQNIFLGAVLHN 741

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
           +       P + I  E   F  E+++ ++ +
Sbjct: 742 MELSYPSTPYLKILHEATSFWLELNQLLLTA 772



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 1/183 (0%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   ++E + + + +   G       +N L+ A   L   E A+  F E     L P++
Sbjct: 531 LRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSN 590

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            + +++I   C       A +++  M   G  P+V T+  L+N LCK G ++EA  + ++
Sbjct: 591 ISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNK 650

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM-NVKNDGLKPDVYTYTAVMDGFCKVG 239
           +   G +P+  TYN L+   C  G  ++AY +L+  V+N  +  DV  Y  V +   ++G
Sbjct: 651 LQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIG 710

Query: 240 RSN 242
           + N
Sbjct: 711 KEN 713


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 180/378 (47%), Gaps = 16/378 (4%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F E    G+ PN  T++ MI  +C    +  A++++  M +    PNV T+  L+N+  
Sbjct: 275 LFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFV 334

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K G+  EA E+ D+M   G  PN  TYN ++ G C   R++ A +M   +   G  PDV+
Sbjct: 335 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 394

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+T ++DG+C   R ++ MELL+E   RG+  N VT+NTL +G+C  G     + L + M
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 454

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-----------GFEVDERMMNS 335
                 PD ++ +TLL+GL   GK++ A+ +FK M +            G E D    N 
Sbjct: 455 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 514

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+ GL      E   LE A +++E+M  +  V D  TY  +I  L K  + DEA      
Sbjct: 515 LICGL----INEGKFLE-AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 569

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
                  P  +TFN +I   C  G++D  L L   M     +     Y  LI    ++  
Sbjct: 570 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 629

Query: 456 SYDACALYGAALKQGVIP 473
              A  ++   +  GV P
Sbjct: 630 INGALDIFQEMISSGVYP 647



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 205/436 (47%), Gaps = 37/436 (8%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ ID+F  + +     SV DFN L+ A+V +   +  +  + +     +  + ++F+I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV----------------------- 162
           +I+C+C+ +    A      +   G HP+V TFT L+                       
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 163 --------NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
                   N LC+ GR+ EA+ +LD+M   G +P+  TY   + G+C +G    A  +L 
Sbjct: 182 VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241

Query: 215 NVKN-DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
            ++    +KP+V  Y+A++DG CK GR +++  L  E  ++G+ PN+VT+N +  G+C  
Sbjct: 242 KMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G       LL+ M +R   P+ ++Y+ L+N  +K GK   A  ++ EM+  G   +    
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           NS++ G C     ++D L+ A  +F  M  K    D  T+  +I      K+ D+ +  L
Sbjct: 362 NSMIDGFC-----KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
           H     G +  T+T+N +I   C  G ++ AL L   M      P   + + L+  L   
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476

Query: 454 EKSYDACALYGAALKQ 469
            K  DA  ++ A  K 
Sbjct: 477 GKLKDALEMFKAMQKS 492



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 157/319 (49%), Gaps = 21/319 (6%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           DR+ A+      D+F  +   G +  V  F  L+         +  ++   E    GL  
Sbjct: 372 DRLDAAE-----DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 426

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N+ T++ +I  +C   D   A  +   M  +G  P++ T   L++ LC +G+LK+ALE+ 
Sbjct: 427 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486

Query: 179 DQMGRI-----------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
             M +            G +P++ TYN L+ GL   G+  EA E+   + + G+ PD  T
Sbjct: 487 KAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 546

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y++++DG CK  R +EA ++      +  +PNVVTFNTL NGYCK G    G+ L   M 
Sbjct: 547 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 606

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +R  + D I Y TL+ G  K G I  A+ IF+EM+  G   D   + ++L G     W +
Sbjct: 607 RRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF----WSK 662

Query: 348 KDLLEDAYQVFEKMTKKVS 366
           ++ LE A  + E +   V 
Sbjct: 663 EE-LERAVAMLEDLQMSVG 680



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 150/306 (49%), Gaps = 14/306 (4%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           L++A+++   M R    P++  +N L+  +  + R +    +   ++   ++ D+Y++T 
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++  FC   +   A+    +  + G+ P+VVTF TL +G C +    + + L   +    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C PD ++++TL+NGL + G++  AV++   MV  G + D+    + + G+C    +  D 
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMC----KMGDT 233

Query: 351 LEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGK-GKKTDEALIHLHHAIEMGHIPRTIT 407
           +  A  +  KM +++S   P    Y  +I  L K G+ +D   + +    + G  P  +T
Sbjct: 234 VS-ALNLLRKM-EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQ-DKGIFPNIVT 290

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I   C  G+   A  LL  M E    P+  +Y+ LI    +  K ++A  LY   L
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML 350

Query: 468 KQGVIP 473
            +G+IP
Sbjct: 351 PRGIIP 356


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 199/410 (48%), Gaps = 27/410 (6%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E   +F +++  G   ++  +N ++     +   + A++ + E    GL PN  TF
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTF 301

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
            I+I   C  ++   ARK +  M   G  PN+  +  L++  CK+G L EAL +  ++ +
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P++ TY+ L+KGLC V R+EEA  +L  +K  G  P+  TY  ++DG+CK G   +
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A+E+ ++  E+G+ PN++TF+TL +GYCK G     +GL   M  +  LPD ++Y+ L++
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           G  K G  + A  + KEM   G   +   ++ L+ GLC     +   + DA ++F     
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC-----KDGRISDAIKLF----- 531

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
            ++ T   T G       K  + D +L            P  + +  +IQ LC +G+I K
Sbjct: 532 -LAKTGTDTTG------SKTNELDRSLCS----------PNHVMYTALIQGLCTDGRIFK 574

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A      M      P   +  ++I    +     D   L    LK G+IP
Sbjct: 575 ASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIP 624



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 178/377 (47%), Gaps = 5/377 (1%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N +L  LV     +T  K + +  + G +PN  T+  +I   C + DF +A ++ D M +
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
               P V  +TIL+  LC   R+ EA  +   M   G  PN+ TYN ++ G C +  V++
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A E+   +  DGL P+V T+  ++DG CK      A + L +    GV PN+  +N L +
Sbjct: 282 ALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           GYCK G   + + L   ++K   LPD  +YS L+ GL    ++  A  + +EM + GF  
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +    N+L+ G C +   EK     A +V  +MT+K    +  T+  +I    K  K + 
Sbjct: 402 NAVTYNTLIDGYCKEGNMEK-----AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEA 456

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A+      +  G +P  + +  +I     +G   +A  L   M E    P+  +   LI 
Sbjct: 457 AMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLID 516

Query: 449 KLDQLEKSYDACALYGA 465
            L +  +  DA  L+ A
Sbjct: 517 GLCKDGRISDAIKLFLA 533



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 191/386 (49%), Gaps = 16/386 (4%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  +   G + +V  +  L+       +   A + F E     + P    ++I+IR  C
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLC 239

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            ++   EA  +   M ++G  PN+ T+  +++  CK   +K+ALE+  +M   G  PN+ 
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVV 299

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+  L+ GLC    +  A + L+++ + G+ P+++ Y  ++DG+CK G  +EA+ L +E 
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            +  + P+V T++ L  G C      +  GLL+ MKK+  LP+ ++Y+TL++G  K G +
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ +  +M   G E +    ++L+ G C     +   +E A  ++ +M  K  + D  
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYC-----KAGKMEAAMGLYTEMVIKGLLPDVV 474

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAI-EMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            Y  +I    K   T EA   LH  + E G  P   T + +I  LC +G+I  A+ L   
Sbjct: 475 AYTALIDGHFKDGNTKEAF-RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL- 532

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKS 456
                   ++T  D   +K ++L++S
Sbjct: 533 --------AKTGTDTTGSKTNELDRS 550



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 154/280 (55%), Gaps = 2/280 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + +K+ ++++  +  DG   +V  F  L+  L   +E  +A KF  + +S+G+ PN +
Sbjct: 275 KIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  YC   +  EA  +   +  +   P+V T++IL+  LC   R++EA  +L +M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  PN  TYN L+ G C  G +E+A E+   +   G++P++ T++ ++DG+CK G+ 
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             AM L  E + +G+ P+VV +  L +G+ K+G   +   L K M++    P+  + S L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           ++GL K G+I  A+ +F  + + G +      N L R LC
Sbjct: 515 IDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLC 552



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 148/321 (46%), Gaps = 5/321 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +    ++++ L K GR     +V   M   G  PN+ TY  L+ G C  G   +A+ +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +    + P V  YT ++ G C   R +EA  +       G+ PN+ T+NT+ +GYCK
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                K + L   M     LP+ +++  L++GL K  ++  A     +M  FG   +  +
Sbjct: 276 IAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+ G C     +   L +A  +  ++ K   + D  TY I+I+ L    + +EA   
Sbjct: 336 YNCLIDGYC-----KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L    + G +P  +T+N +I   C EG ++KA+ +   M E    P+  ++  LI    +
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 453 LEKSYDACALYGAALKQGVIP 473
             K   A  LY   + +G++P
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLP 471



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 142/306 (46%), Gaps = 18/306 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E + +   I+K      V  ++ L+  L  ++  E A     E    G  PN+ 
Sbjct: 345 KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  YC + +  +A +V   M + G  PN+ TF+ L++  CK+G+++ A+ +  +M
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++  Y  L+ G    G  +EA+ +   ++  GL P+V+T + ++DG CK GR 
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524

Query: 242 NEAMELL-------------NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           ++A++L              NE      +PN V +  L  G C +G   K       M+ 
Sbjct: 525 SDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRC 584

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
               PD  +   ++ G  +   +R  + +  ++++ G      + NS +  +  K +EE 
Sbjct: 585 SGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGI-----IPNSSVYRVLAKGYEES 639

Query: 349 DLLEDA 354
             L+ A
Sbjct: 640 GYLKSA 645



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 10/217 (4%)

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
           TPNV  F  L   + + G   +    L +  K + LP   + + +L+GL+K G+      
Sbjct: 125 TPNV--FGVLIIAFSEMGLVEEA---LWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWK 179

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           ++ +MV  G   +     +L+ G C     + D L+ A+++F++M +K        Y I+
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCC----RQGDFLK-AFRLFDEMIEKKIFPTVVIYTIL 234

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           IR L    +  EA          G +P   T+N ++   C    + KAL L   M     
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGL 294

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +P+  ++ +LI  L + ++   A          GV+P
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 24/166 (14%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  Y    +   AR+    +FD     +VTT+T ++      G+ +EAL++  +M    
Sbjct: 790 LINMYSKCGEIGTARR----LFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETN 845

Query: 186 CK----------------PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTY 228
            +                PN  T+  +L    + G VEE  +   ++K D  L+P +  +
Sbjct: 846 KRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHF 905

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
             ++D  C+ G   EA E +   ++  V PN V + TL      +G
Sbjct: 906 GCMVDLLCRAGLLTEAYEFI---LKMPVRPNAVVWRTLLGACSLQG 948



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 17/165 (10%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY------------ 151
           A +   E    GL PN +T S +I   C      +A K+   +   G             
Sbjct: 492 AFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDR 549

Query: 152 ---HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
               PN   +T L+  LC  GR+ +A +    M   G +P++ T   +++G      + +
Sbjct: 550 SLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRD 609

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
              +  ++   G+ P+   Y  +  G+ + G    A+    E ++
Sbjct: 610 VMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQ 654


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 213/450 (47%), Gaps = 40/450 (8%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           A+RF D  K         + + +++ G   SV  FN +L  L    + + A+  F +   
Sbjct: 329 AERFDDAYK---------LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF-DVMK 378

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
               PN  T++I+I   C      EA K+ D M   G  PN+ +  I+V+ LCK+ +L+E
Sbjct: 379 KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEE 438

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A  + +     GC PN  TY  L+ GL   G++++AY +   + + G   +   YT+++ 
Sbjct: 439 AHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIR 498

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
            F   GR  +  ++  E I RG  P++   NT  +   K G   KG  + + MK    LP
Sbjct: 499 NFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLP 558

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-----KSWE-- 346
           D  SYS L++GL K G+ R   +IF+ M + GF +D R  N+++ GLC      K++E  
Sbjct: 559 DVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVL 618

Query: 347 -----------------------EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                                  + D L++AY +FE+   K    +   Y  +I   GK 
Sbjct: 619 EEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKV 678

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + DEA + L   ++ G  P   T+N+++ AL    +ID+AL+    M E    P+  +Y
Sbjct: 679 GRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTY 738

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +LI  L +++K   A   +    KQG+IP
Sbjct: 739 SILINGLCRVQKYNKAFVFWQEMQKQGLIP 768



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 199/411 (48%), Gaps = 5/411 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + E   I D ++  G   ++   N ++  L   N+ E A + F  AS  G  PNS T
Sbjct: 398 AGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVT 457

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           +  +I     K    +A ++ + M D G+  N   +T L+ +    GR ++  ++  +M 
Sbjct: 458 YCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMI 517

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           R G +P++   N  +  +   G VE+   +  ++K+ G  PDV +Y+ ++ G  K G++ 
Sbjct: 518 RRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQAR 577

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           E   +     ++G   +   +N + +G CK G   K   +L+ MK ++  P   +Y +++
Sbjct: 578 ETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIV 637

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +GL K  ++  A  +F+E    G E++  + +SL+ G     + +   +++AY + E+M 
Sbjct: 638 DGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDG-----FGKVGRIDEAYLILEEMM 692

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           KK    +  T+  ++  L K ++ DEALI      EM   P T T++ +I  LC   K +
Sbjct: 693 KKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYN 752

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           KA +    M +   IP+  +Y  +I+ L ++    DA +L+      G IP
Sbjct: 753 KAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIP 803



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 158/318 (49%), Gaps = 5/318 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I+  + + G    ++  N  +  +    E E     F +  S+G  P+  ++SI+I    
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLT 571

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 E   +   M   G+  +   +  +V+ LCKSG++ +A EVL++M      P + 
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVA 631

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  ++ GL  + R++EAY +    K+ G++ +V  Y++++DGF KVGR +EA  +L E 
Sbjct: 632 TYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEM 691

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+TPNV T+N+L +   K     + +   + MK+  C P+  +YS L+NGL +  K 
Sbjct: 692 MKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 751

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A   ++EM + G   +     +++ GL      +   + DAY +FE+      + D  
Sbjct: 752 NKAFVFWQEMQKQGLIPNVVTYTTMISGLA-----KVGNITDAYSLFERFKTNGGIPDSA 806

Query: 372 TYGIVIRTLGKGKKTDEA 389
           ++  +I  +    +  EA
Sbjct: 807 SFNALIEGMSNANRPMEA 824



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 187/410 (45%), Gaps = 6/410 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +      F  +K  G       +  ++  L        A + F +  +    P ++
Sbjct: 258 KAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAY 317

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ MI  Y +   F +A K+++ + + G  P+V +F  ++  L K  ++ EAL + D M
Sbjct: 318 AYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM 377

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +   KPNI TYN ++  LC  GRV EAY++   ++  GL P++ +   ++D  CK  + 
Sbjct: 378 KK-DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQL 436

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  +   A ERG  PN VT+ +L +G  K+G       L + M       + I Y++L
Sbjct: 437 EEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSL 496

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +      G+      I+KEM+R G   D  ++N+ +     K+ E    +E    +FE M
Sbjct: 497 IRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYM-DCVFKAGE----VEKGRAIFEDM 551

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                + D  +Y I+I  L K  +  E         + G       +N V+  LC  GK+
Sbjct: 552 KSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKV 611

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           DKA  +L  M      P+  +Y  ++  L ++++  +A  L+  A  +G+
Sbjct: 612 DKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGI 661



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 204/426 (47%), Gaps = 13/426 (3%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP S+     +D + K   + +   +F+ +   G + +   +  L+    M   +E   K
Sbjct: 452 NPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHK 511

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            + E    G  P+    +  + C     +  + R + + M   G+ P+V +++IL++ L 
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLT 571

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K+G+ +E   +   M + G   + + YN ++ GLC  G+V++AYE+L  +K   + P V 
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVA 631

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY +++DG  K+ R +EA  L  EA  +G+  NV+ +++L +G+ K G   +   +L+ M
Sbjct: 632 TYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEM 691

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            K+   P+  ++++L++ L+K  +I  A+  F+ M       +    + L+ GLC     
Sbjct: 692 MKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 751

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
            K     A+  +++M K+  + +  TY  +I  L K     +A          G IP + 
Sbjct: 752 NK-----AFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSA 806

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS-RTSYDMLITKLDQLEKS--YDACALY 463
           +FN +I+ +    +  +A    + ++E  ++   R +    I+ LD L K+   +  A+ 
Sbjct: 807 SFNALIEGMSNANRPMEA----YQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIV 862

Query: 464 GAALKQ 469
           GA L +
Sbjct: 863 GAVLSE 868



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 173/383 (45%), Gaps = 6/383 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  LV     E A +           P    ++++I           A +++  M D G
Sbjct: 147 LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVG 206

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           Y  +V  FT LV +L + G+++ AL ++D++     +P+I  YN  +      G V+ A+
Sbjct: 207 YEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAW 266

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           +    +K  GL+PD  +YT+++   CK GR  EA EL  +       P    +NT+  GY
Sbjct: 267 KFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGY 326

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
                      LL+ +++R C+P  +S++++L  L K  K+  A+++F  M +   + + 
Sbjct: 327 GSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNI 385

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N ++  LCM        + +AY++ ++M       +  +  I++  L K  + +EA 
Sbjct: 386 STYNIIIDMLCMAGR-----VNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAH 440

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                A E G  P ++T+ ++I  L  +GKID A  L   M +     +   Y  LI   
Sbjct: 441 RIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNF 500

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
               +  D   +Y   +++G  P
Sbjct: 501 FMHGRKEDGHKIYKEMIRRGGRP 523



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 159/335 (47%), Gaps = 6/335 (1%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           S +  L+ AL    + E A++   +    G   +   F+ ++R    +     A  ++D 
Sbjct: 177 SAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDE 236

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           +  +   P++  + + ++   K+G +  A +   ++   G +P+  +Y  ++  LC  GR
Sbjct: 237 VKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGR 296

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           + EA E+   ++ +   P  Y Y  ++ G+    R ++A +LL    ERG  P+VV+FN+
Sbjct: 297 LGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNS 356

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +     K+    + + L  +MKK +  P+  +Y+ +++ L   G++  A  I  EM   G
Sbjct: 357 ILTCLGKKRKVDEALTLFDVMKK-DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAG 415

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              +   +N ++  LC     + + LE+A+++FE  +++    +  TY  +I  LGK  K
Sbjct: 416 LFPNLLSVNIMVDRLC-----KANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGK 470

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            D+A       ++ GH    I + ++I+     G+
Sbjct: 471 IDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGR 505



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/379 (22%), Positives = 174/379 (45%), Gaps = 13/379 (3%)

Query: 98  LNEQETAVKFF---SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPN 154
           L     A  FF   S +SS  L P+++   +    +    D     KV++ M   GY   
Sbjct: 85  LKNPSLAAPFFLLASASSSQPLPPDAYNAVLPFLSH----DLAALEKVLEEMSHLGYGLP 140

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
                 LV +L +S RL++A  V+  M  +  +P    Y  L+  L    + E A E+L 
Sbjct: 141 NPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLR 200

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +++ G +  V  +T ++    + G+   A+ L++E     + P++V +N   + + K G
Sbjct: 201 QMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 260

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
           +          +K     PD +SY++++  L K G++  A  +F +M     E +  +  
Sbjct: 261 SVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQM-----EAERDVPC 315

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           +      +  +   +  +DAY++ E++ ++  +    ++  ++  LGK +K DEAL  L 
Sbjct: 316 AYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALT-LF 374

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
             ++    P   T+N +I  LC  G++++A  +   M      P+  S ++++ +L +  
Sbjct: 375 DVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKAN 434

Query: 455 KSYDACALYGAALKQGVIP 473
           +  +A  ++ +A ++G  P
Sbjct: 435 QLEEAHRIFESASERGCNP 453


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 180/378 (47%), Gaps = 16/378 (4%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F E    G+ PN  T++ MI  +C    +  A++++  M +    PNV T+  L+N+  
Sbjct: 275 LFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFV 334

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K G+  EA E+ D+M   G  PN  TYN ++ G C   R++ A +M   +   G  PDV+
Sbjct: 335 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 394

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+T ++DG+C   R ++ MELL+E   RG+  N VT+NTL +G+C  G     + L + M
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 454

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-----------GFEVDERMMNS 335
                 PD ++ +TLL+GL   GK++ A+ +FK M +            G E D    N 
Sbjct: 455 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 514

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+ GL      E   LE A +++E+M  +  V D  TY  +I  L K  + DEA      
Sbjct: 515 LICGL----INEGKFLE-AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 569

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
                  P  +TFN +I   C  G++D  L L   M     +     Y  LI    ++  
Sbjct: 570 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 629

Query: 456 SYDACALYGAALKQGVIP 473
              A  ++   +  GV P
Sbjct: 630 INGALDIFQEMISSGVYP 647



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 205/436 (47%), Gaps = 37/436 (8%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ ID+F  + +     SV DFN L+ A+V +   +  +  + +     +  + ++F+I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV----------------------- 162
           +I+C+C+ +    A      +   G HP+V TFT L+                       
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 163 --------NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
                   N LC+ GR+ EA+ +LD+M   G +P+  TY   + G+C +G    A  +L 
Sbjct: 182 VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241

Query: 215 NVKN-DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
            ++    +KP+V  Y+A++DG CK GR +++  L  E  ++G+ PN+VT+N +  G+C  
Sbjct: 242 KMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G       LL+ M +R   P+ ++Y+ L+N  +K GK   A  ++ EM+  G   +    
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           NS++ G C     ++D L+ A  +F  M  K    D  T+  +I      K+ D+ +  L
Sbjct: 362 NSMIDGFC-----KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
           H     G +  T+T+N +I   C  G ++ AL L   M      P   + + L+  L   
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476

Query: 454 EKSYDACALYGAALKQ 469
            K  DA  ++ A  K 
Sbjct: 477 GKLKDALEMFKAMQKS 492



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 157/316 (49%), Gaps = 21/316 (6%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           DR+ A+      D+F  +   G +  V  F  L+         +  ++   E    GL  
Sbjct: 372 DRLDAAE-----DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 426

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N+ T++ +I  +C   D   A  +   M  +G  P++ T   L++ LC +G+LK+ALE+ 
Sbjct: 427 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486

Query: 179 DQMGRI-----------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
             M +            G +P++ TYN L+ GL   G+  EA E+   + + G+ PD  T
Sbjct: 487 KAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 546

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y++++DG CK  R +EA ++      +  +PNVVTFNTL NGYCK G    G+ L   M 
Sbjct: 547 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 606

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +R  + D I Y TL+ G  K G I  A+ IF+EM+  G   D   + ++L G     W +
Sbjct: 607 RRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF----WSK 662

Query: 348 KDLLEDAYQVFEKMTK 363
           ++ LE A  + E + +
Sbjct: 663 EE-LERAVAMLEDLQR 677



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 134/276 (48%), Gaps = 11/276 (3%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + + +++   + + G   +   +N L+    ++ +   A+    +  S G+ P+  T
Sbjct: 406 AKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 465

Query: 123 FSIMIRCYCNKNDFFEARKVIDCM------FD-----NGYHPNVTTFTILVNSLCKSGRL 171
            + ++   C+     +A ++   M       D     NG  P+V T+ IL+  L   G+ 
Sbjct: 466 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKF 525

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
            EA E+ ++M   G  P+  TY+ ++ GLC   R++EA +M +++ +    P+V T+  +
Sbjct: 526 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTL 585

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           ++G+CK GR ++ +EL  E   RG+  + + + TL  G+ K G     + + + M     
Sbjct: 586 INGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGV 645

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            PD I+   +L G     ++  AV++ +++ R+  E
Sbjct: 646 YPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLE 681



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 150/306 (49%), Gaps = 14/306 (4%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           L++A+++   M R    P++  +N L+  +  + R +    +   ++   ++ D+Y++T 
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++  FC   +   A+    +  + G+ P+VVTF TL +G C +    + + L   +    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C PD ++++TL+NGL + G++  AV++   MV  G + D+    + + G+C    +  D 
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMC----KMGDT 233

Query: 351 LEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGK-GKKTDEALIHLHHAIEMGHIPRTIT 407
           +  A  +  KM +++S   P    Y  +I  L K G+ +D   + +    + G  P  +T
Sbjct: 234 VS-ALNLLRKM-EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQ-DKGIFPNIVT 290

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I   C  G+   A  LL  M E    P+  +Y+ LI    +  K ++A  LY   L
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML 350

Query: 468 KQGVIP 473
            +G+IP
Sbjct: 351 PRGIIP 356


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 220/478 (46%), Gaps = 75/478 (15%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E +D+F  + K     S+ +F+ LL A+  + + +  + F  +    G++ N +T++I
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105

Query: 126 MIRC-----------------------------------YCNKNDFFEARKVIDCMFDNG 150
           MI C                                   +C+ N   EA  ++D M + G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG------ 204
           Y P+  TFT LV+ L +  +  EA+ ++++M   GC+P++ TY  ++ GLC  G      
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 205 -----------------------------RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
                                         V++A  +   + N G++PDV+TY++++   
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           C  GR ++A  LL++ +ER + PNVVTFN+L + + KEG  ++   L   M +R+  P+ 
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           ++Y++L+NG     ++  A  IF  MV      D    N+L+ G C     +   + D  
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC-----KAKKVVDGM 400

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++F  M+++  V +  TY  +I    +    D A +     +  G  P  +T+N ++  L
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           C  GK++KA+++   + +    P   +Y+++   + +  K  D   L+ +   +GV P
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 182/355 (51%), Gaps = 7/355 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ + ++K      V  ++ ++ +L      + A+  F+E  + G+ P+ +T+S +I C
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            CN   + +A +++  M +   +PNV TF  L+++  K G+L EA ++ D+M +    PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           I TYN L+ G C   R++EA ++   + +    PDV TY  +++GFCK  +  + MEL  
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +   RG+  N VT+ TL +G+ +         + K M      P+ ++Y+TLL+GL K G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K+  A+ +F+ + +   E D    N +  G+C     +   +ED + +F  ++ K    D
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC-----KAGKVEDGWDLFCSLSLKGVKPD 519

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              Y  +I    K    +EA        E G +P + T+N +I+A   +G  DKA
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG--DKA 572



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 145/299 (48%), Gaps = 1/299 (0%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFND 90
           ++ AS   ++ L+ K NP  +     +D   K   L E   +FD + +   + ++  +N 
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    M +  + A + F+   S    P+  T++ +I  +C      +  ++   M   G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              N  T+T L++   ++     A  V  QM   G  PNI TYN LL GLC  G++E+A 
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   ++   ++PD+YTY  + +G CK G+  +  +L      +GV P+V+ +NT+ +G+
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           CK+G   +   L   MK+   LPD  +Y+TL+   L+ G    +  + KEM    F  D
Sbjct: 531 CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 149/304 (49%), Gaps = 5/304 (1%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +L EA+++  +M +    P+I  ++ LL  +  + + +        ++  G+  ++YTY 
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++  C+  + + A+ +L + ++ G  P++VT N+L NG+C      + V L+  M + 
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD ++++TL++GL +  K   AV++ + MV  G + D     +++ GLC +   E D
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG--EPD 222

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
           L   A  +  KM K     D   Y  VI +L K +  D+AL         G  P   T++
Sbjct: 223 L---ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           ++I  LC  G+   A  LL  M E    P+  +++ LI    +  K  +A  L+   +++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339

Query: 470 GVIP 473
            + P
Sbjct: 340 SIDP 343


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 214/474 (45%), Gaps = 81/474 (17%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +DIF      G N  +  FN +L A +  N+   A  FF+   + G++PN  T++I+I+ 
Sbjct: 105 VDIF------GCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKI 158

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C K  F + + ++  MF+NG +P++ ++  L+N+L KSG L +A+E+ D+M   G  P+
Sbjct: 159 SCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPD 218

Query: 190 ------------------------------------IQTYNCLLKGLCYVGRVEEAYEML 213
                                               ++TYN ++ GLC +G+++E+ EM 
Sbjct: 219 VMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMW 278

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +K +   PD++T+++++ G  K G  N A ++  E IE G++P+V T+N + +G  + 
Sbjct: 279 NRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRT 338

Query: 274 GTPMKGVGLLKLMKKRNCL----------------------------------PDKISYS 299
           G   K   L  +M K NC                                    D  +Y 
Sbjct: 339 GKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYG 398

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L+NGL K G +  A+ I +E    G ++D    +S++ GLC     +K +LE A ++  
Sbjct: 399 LLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLC-----KKGMLEQAVELIH 453

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M K     +   +  +I    +  K +EA+  L         P  +++N +I  LC   
Sbjct: 454 QMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAE 513

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   A L L  M E    P   +Y +LI  L + EK   A  L+   + + + P
Sbjct: 514 RFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKP 567



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 213/463 (46%), Gaps = 43/463 (9%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTN------------------------ 82
           NP  L     ++ + K+  L + +++FD +   G N                        
Sbjct: 181 NPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANE 240

Query: 83  -W-----------SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
            W           SV  +N ++  L  L + + +++ ++       +P+ +TFS MI   
Sbjct: 241 IWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGL 300

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
               +F  A KV   M ++G  P+V T+  +++ L ++G+L +  E+ + M +  C  NI
Sbjct: 301 SKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNI 359

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +YN L++GL    +VE+A      +   GLK D  TY  +++G CK G  N+A+ +L E
Sbjct: 360 VSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEE 419

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
           A   G   +   ++++ +G CK+G   + V L+  MKK     +   +++L+NG ++  K
Sbjct: 420 AENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFK 479

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A+S+ +EM            N+++ GLC     + +   DAY   ++M ++    D 
Sbjct: 480 LEEAISVLREMKSKDCAPTVVSYNTIINGLC-----KAERFSDAYLSLKEMLEEGLKPDM 534

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY ++I  L +G+K D AL   H  I     P     N +I  LC   K+D AL +   
Sbjct: 535 ITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQ 594

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M +   +P   +++ ++  L +     +A  ++   L+ G+ P
Sbjct: 595 MRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQP 637



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 204/449 (45%), Gaps = 44/449 (9%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           D +KA+ + +R+    S+       SV  +N ++  L  L + + +++ ++       +P
Sbjct: 234 DFVKANEIWKRLLTESSVYP-----SVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSP 288

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           + +TFS MI       +F  A KV   M ++G  P+V T+  +++ L ++G+L +  E+ 
Sbjct: 289 DLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW 348

Query: 179 DQMGRIGC----------------------------------KPNIQTYNCLLKGLCYVG 204
           + M +  C                                  K +  TY  L+ GLC  G
Sbjct: 349 NVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNG 408

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            + +A  +L   +N+G   D + Y++++ G CK G   +A+EL+++  +     N   FN
Sbjct: 409 YLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFN 468

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           +L NGY +     + + +L+ MK ++C P  +SY+T++NGL K  +   A    KEM+  
Sbjct: 469 SLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEE 528

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G + D    + L+ GLC    E+ D+   A  ++ +   K    D   + I+I  L   +
Sbjct: 529 GLKPDMITYSLLIDGLCRG--EKVDM---ALNLWHQCINKRLKPDLQMHNIIIHGLCTAQ 583

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           K D AL       ++  +P  +T N +++ L   G   +AL +   + E    P   SY+
Sbjct: 584 KVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYN 643

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
           +    L    +  DA      AL +G++P
Sbjct: 644 ITFKGLCSCARVSDAIEFLYDALDRGILP 672



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 203/420 (48%), Gaps = 39/420 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E +++++ +KK+  +  +  F+ ++  L        A K F E    GL+P+  
Sbjct: 267 KLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVR 326

Query: 122 TFSIMI----------RCY-----CNKND---FFEARKVIDCMFDN-------------- 149
           T++ M+          +C+      +KN+         +I  + DN              
Sbjct: 327 TYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLH 386

Query: 150 --GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G   + TT+ +L+N LCK+G L +AL +L++    G   +   Y+ ++ GLC  G +E
Sbjct: 387 ERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLE 446

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A E++  +K +  K + + + ++++G+ +  +  EA+ +L E   +   P VV++NT+ 
Sbjct: 447 QAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTII 506

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG CK          LK M +    PD I+YS L++GL +  K+  A++++ + +    +
Sbjct: 507 NGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLK 566

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D +M N ++ GLC  + ++ D+   A ++F +M +   V D  T+  ++  L K     
Sbjct: 567 PDLQMHNIIIHGLC--TAQKVDV---ALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCV 621

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EAL      +E G  P  I++N   + LC   ++  A+  L+   +   +P+  ++++L+
Sbjct: 622 EALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 146/312 (46%), Gaps = 40/312 (12%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++   EA + G   +++ +S M+   C K    +A ++I  M  N    N   F  L+N
Sbjct: 413 ALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLIN 472

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
              ++ +L+EA+ VL +M    C P + +YN ++ GLC   R  +AY  L  +  +GLKP
Sbjct: 473 GYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKP 532

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D+ TY+ ++DG C+  + + A+ L ++ I + + P++   N + +G C        + + 
Sbjct: 533 DMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIF 592

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M++ NC+PD ++++T++ GL K G    A+ I+  ++  G +                
Sbjct: 593 TQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQ---------------- 636

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                                    D  +Y I  + L    +  +A+  L+ A++ G +P
Sbjct: 637 ------------------------PDIISYNITFKGLCSCARVSDAIEFLYDALDRGILP 672

Query: 404 RTITFNNVIQAL 415
              T+N +++A+
Sbjct: 673 NAPTWNVLVRAV 684



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 121/245 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L++ +++   +KK+    +   FN L+   V   + E A+    E  S   AP   
Sbjct: 441 KKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVV 500

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +I   C    F +A   +  M + G  P++ T+++L++ LC+  ++  AL +  Q 
Sbjct: 501 SYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQC 560

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                KP++Q +N ++ GLC   +V+ A E+   ++     PD+ T+  +M+G  K G  
Sbjct: 561 INKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDC 620

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA+++ +  +E G+ P+++++N  F G C        +  L     R  LP+  +++ L
Sbjct: 621 VEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVL 680

Query: 302 LNGLL 306
           +  ++
Sbjct: 681 VRAVV 685



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 4/289 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + + I +  + +G +     ++ ++  L      E AV+   +        NS  F+ 
Sbjct: 410 LNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNS 469

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  Y       EA  V+  M      P V ++  ++N LCK+ R  +A   L +M   G
Sbjct: 470 LINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEG 529

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KP++ TY+ L+ GLC   +V+ A  +     N  LKPD+  +  ++ G C   + + A+
Sbjct: 530 LKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVAL 589

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+  +  +    P++VT NT+  G  K G  ++ + +   + +    PD ISY+    GL
Sbjct: 590 EIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGL 649

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
               ++  A+    + +  G   +    N L+R +     ++K L+E A
Sbjct: 650 CSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVV----DDKPLMEYA 694


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 210/456 (46%), Gaps = 21/456 (4%)

Query: 20  HNKIPQFNKLVVFAAA-----SLSTAESLDLKENPRSLQAQRFVDRIKASPLKERID--- 71
           H  +PQ + LV F  +     S ST  S  L+  PR       V  +  + +   +D   
Sbjct: 132 HRMLPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVGLVFDALISAYVDSGF 191

Query: 72  ------IFDSIKKDGTNWSVSDFNDLLMALVMLN--EQETAVKFFSEASSYGLAPNSWTF 123
                  F  + K+     +    +LL  +V L   E E +   + E    G  P  + F
Sbjct: 192 TPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFF 251

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           ++++  +C   D   AR V D +   G  P V +F  L++  CKSG ++E   +   M  
Sbjct: 252 NVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMES 311

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            G  P++ T++ L+ GLC  GR++E   +   +   GL P+  T+T ++DG CK G+ + 
Sbjct: 312 EGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDL 371

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A++     + +GV P++VT+N L NG CK G   +   L+  M      PDKI+++TL++
Sbjct: 372 ALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLID 431

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           G  K G +  A+ I + MV  G E+D+    +L+ GLC +       + DA ++   M  
Sbjct: 432 GCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGR-----VHDAGRMLTDMLS 486

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
                D  TY +VI    K          L      GH+P  +T+N ++  LC +G++  
Sbjct: 487 AGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKN 546

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           A +LL  M      P+  +Y++L+    +   S D 
Sbjct: 547 AKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDV 582



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 118/231 (51%), Gaps = 3/231 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           F  +   G    +  +N L+  L  + + + A +  +E ++ GL P+  TF+ +I   C 
Sbjct: 376 FQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCK 435

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
             D   A ++   M + G   +   FT L++ LC+ GR+ +A  +L  M   G KP+  T
Sbjct: 436 DGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPT 495

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y  ++   C  G V+  +++L  +++DG  P V TY A+M+G CK G+   A  LL+  +
Sbjct: 496 YTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAML 555

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
             GV PN +T+N L +G+ K G+    V +     ++  + D  SY+ L+N
Sbjct: 556 NVGVAPNDITYNILLDGHSKHGS---SVDVDIFNSEKGLVTDYASYTALVN 603



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 5/269 (1%)

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +E ++ + + V + G  P +Y +  +M GFCK G    A  + +E  +RG+ P VV+FNT
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G CK G   +G  L  +M+     PD  ++S L+NGL K G++     +F EM   G
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              +     +L+ G C     + DL   A + F+ M  +    D  TY  +I  L K   
Sbjct: 349 LVPNGVTFTTLIDGQCKGG--KVDL---ALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 403

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             EA   ++     G  P  ITF  +I   C +G ++ AL +   M E        ++  
Sbjct: 404 LKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTA 463

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQ 474
           LI+ L +  + +DA  +    L  G  P 
Sbjct: 464 LISGLCREGRVHDAGRMLTDMLSAGFKPD 492



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 3/207 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   LKE   + + +   G       F  L+       + E+A++        G+  +  
Sbjct: 400 KVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDV 459

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I   C +    +A +++  M   G+ P+  T+T++++  CK G +K   ++L +M
Sbjct: 460 AFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEM 519

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P + TYN L+ GLC  G+++ A  +L  + N G+ P+  TY  ++DG  K G S
Sbjct: 520 QSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSS 579

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFN 268
            + +++ N   E+G+  +  ++  L N
Sbjct: 580 VD-VDIFNS--EKGLVTDYASYTALVN 603



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 87/226 (38%), Gaps = 40/226 (17%)

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E ++ G  P +  FN L +G+CK G       +   + KR   P  +S++TL++G  K G
Sbjct: 238 EVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSG 297

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +     +   M   G   D    ++L+ GLC     ++  L++   +F++M  +     
Sbjct: 298 DVEEGFRLKGVMESEGVCPDVFTFSALINGLC-----KEGRLDEGSLLFDEMCGR----- 347

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
                                         G +P  +TF  +I   C  GK+D AL    
Sbjct: 348 ------------------------------GLVPNGVTFTTLIDGQCKGGKVDLALKNFQ 377

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +M      P   +Y+ LI  L ++    +A  L       G+ P +
Sbjct: 378 MMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDK 423


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 211/424 (49%), Gaps = 5/424 (1%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           RS   +R    + +    + + +F  + +     S+ DF+ LL+A+  LN+ E  +  F 
Sbjct: 44  RSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFR 103

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
                G++ + ++F+ +I C+C       A   +  M   G+ P++ TF  LVN  C   
Sbjct: 104 HLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVN 163

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           R  EA+ ++DQ+  +G +PN+  YN ++  LC  G+V  A ++L ++K  G++PDV TY 
Sbjct: 164 RFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYN 223

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           +++      G    +  +L++ +  G++P+V+TF+ L + Y KEG  ++       M +R
Sbjct: 224 SLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQR 283

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
           +  P+ ++Y++L+NGL   G +  A  +   +V  GF  +    N+L+ G C     +  
Sbjct: 284 SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC-----KAK 338

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            ++D  ++   M++     D  TY  + +   +  K   A   L   +  G  P   TFN
Sbjct: 339 RVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFN 398

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            ++  LC  GKI KAL+ L  + +   +    +Y+++I  L + +K  DA  L+ +   +
Sbjct: 399 ILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALK 458

Query: 470 GVIP 473
           GV P
Sbjct: 459 GVSP 462



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 100/208 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E    ++ + +   N ++  +N L+  L +    + A K  +   S G  PN+ 
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  YC      +  K++  M  +G   +  T+  L    C++G+   A +VL +M
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ T+N LL GLC  G++ +A   L +++       + TY  ++ G CK  + 
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNG 269
            +A  L      +GV+P+V+T+ T+  G
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIG 473


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 221/449 (49%), Gaps = 16/449 (3%)

Query: 36  SLSTAESLDLKEN-------PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSD 87
           SL   E+LDL  +       P  +   R ++ I K       I++   ++  G +  +  
Sbjct: 49  SLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYT 108

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            N L+      ++   A  F  +    G  P+ +TF+ +I  +C  N   EA  +++ M 
Sbjct: 109 CNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV 168

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  P+V  +T +++SLCK+G +  AL + +QM   G +P++  Y  L+ GLC  GR  
Sbjct: 169 EMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWR 228

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +L  +    +KPDV T+ A++D F K G+  +A EL NE I+  + PN+ T+ +L 
Sbjct: 229 DADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLI 288

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG C EG   +   +  LM+ + C PD ++Y++L+NG  K  K+  A+ IF EM + G  
Sbjct: 289 NGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLT 348

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +     +L++G  +           A +VF  M  +    +  TY +++  L    K +
Sbjct: 349 GNTITYTTLIQGFGLVGKPNV-----AQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVN 403

Query: 388 EALIHLH--HAIEMGHIPRTI-TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           +AL+        E+  +P  I T+N ++  LC  GK++KAL++   M +        +Y 
Sbjct: 404 KALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYT 463

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++I  + +  K  DA  L+ +   +GV P
Sbjct: 464 IIIQGMCKAGKVKDALNLFCSLPSKGVKP 492



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 217/432 (50%), Gaps = 13/432 (3%)

Query: 33  AAASLSTAESLDLKENPRSLQAQRFVDR--IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           +  +LS +  L L    R+    R + R  + +    E +D+F  + +     S+ DF  
Sbjct: 17  SGKALSFSRLLGLSFWVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTR 76

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           LL  +  + + +  +         G++ + +T ++++ C+C  +    A   +  +   G
Sbjct: 77  LLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLG 136

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + P++ TFT L+N  C   R++EA+ +++QM  +G KP++  Y  ++  LC  G V+ A 
Sbjct: 137 FEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNAL 196

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   ++N G++PDV  YT++++G C  GR  +A  LL   ++R + P+V+TFN L + +
Sbjct: 197 SLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAF 256

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
            KEG  +    L   M + +  P+  +Y++L+NGL   G++  A  +F  M   G   D 
Sbjct: 257 VKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDV 316

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               SL+ G C     +   +EDA ++F +M++K    +  TY  +I+  G   K + A 
Sbjct: 317 VAYTSLINGFC-----KCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQ 371

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH---AKIPSRTSYDMLI 447
               H +  G  P   T+N ++  LC  GK++KAL++   M +       P+  +Y++L+
Sbjct: 372 EVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLL 431

Query: 448 TKL---DQLEKS 456
             L    +LEK+
Sbjct: 432 HGLCYNGKLEKA 443



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 186/371 (50%), Gaps = 8/371 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E + + + + + G    V  +  ++ +L      + A+  F++  +YG+ P+   ++ 
Sbjct: 157 IEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTS 216

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   CN   + +A  ++  M      P+V TF  L+++  K G+L +A E+ ++M ++ 
Sbjct: 217 LVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMS 276

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PNI TY  L+ GLC  GR++EA +M   ++  G  PDV  YT++++GFCK  +  +AM
Sbjct: 277 IAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAM 336

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++  E  ++G+T N +T+ TL  G+   G P     +   M  R   P+  +Y+ LL+ L
Sbjct: 337 KIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCL 396

Query: 306 LKWGKIRPAVSIFKEMVRF---GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
              GK+  A+ IF++M +    G   + R  N LL GLC         LE A  VF  M 
Sbjct: 397 CYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGK-----LEKALMVFGDMQ 451

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           K+       TY I+I+ + K  K  +AL         G  P  +T+  +I  L  EG + 
Sbjct: 452 KRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLML 511

Query: 423 KALLLLFLMYE 433
           +A +L   M E
Sbjct: 512 EAHVLFRKMKE 522



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 167/361 (46%), Gaps = 15/361 (4%)

Query: 123 FSIMIRCYCNKND----------FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
            S  +R +CN  +          F EA  +   M ++   P++  FT L+N + K  +  
Sbjct: 29  LSFWVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFD 88

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
             + +   +  +G   ++ T N L+   C   +   A   L  +   G +PD++T+T+++
Sbjct: 89  VVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLI 148

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           +GFC   R  EAM ++N+ +E G+ P+VV + T+ +  CK G     + L   M+     
Sbjct: 149 NGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIR 208

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD + Y++L+NGL   G+ R A  + + M++   + D    N+L+      ++ ++  L 
Sbjct: 209 PDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALI-----DAFVKEGKLL 263

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           DA +++ +M +     +  TY  +I  L    + DEA    +     G  P  + + ++I
Sbjct: 264 DAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLI 323

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
              C   K++ A+ + + M +     +  +Y  LI     + K   A  ++G  + +GV 
Sbjct: 324 NGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVP 383

Query: 473 P 473
           P
Sbjct: 384 P 384



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 38/230 (16%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   +F  ++  G    V  +  L+       + E A+K F E S  GL  N+ T++ 
Sbjct: 297 LDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTT 356

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI- 184
           +I+ +        A++V   M   G  PN+ T+ +L++ LC +G++ +AL + + M +  
Sbjct: 357 LIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKRE 416

Query: 185 --GCKPNIQTYNCLLKGLCY-----------------------------------VGRVE 207
             G  PNI+TYN LL GLCY                                    G+V+
Sbjct: 417 IDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVK 476

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
           +A  +  ++ + G+KP+V TYT ++ G  + G   EA  L  +  E GV+
Sbjct: 477 DALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 183/330 (55%), Gaps = 5/330 (1%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+  T+SI+I   C   +   A  +++ M      PN+ T+  L++ LCK G+ ++   +
Sbjct: 201 PDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTL 260

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L +M  +   PN+ T++ L+ GLC  G+VE+A E++ ++   G++PD+ TY+A+MDG+C 
Sbjct: 261 LSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCL 320

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G+ + A  + N   ++G+ PN+ +++ L NGYCK+    K + L   + ++   PD ++
Sbjct: 321 RGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVT 380

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           YST+L+GL++ G+I  A  IF EM+R G   D  + ++LL G     + +  L+E+A  +
Sbjct: 381 YSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFG-----YFKYGLVEEAMLL 435

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           F K+ +    T+   Y +VI  L K  +  EA         +G IP   T+N +I   C 
Sbjct: 436 FSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCR 495

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EG  D+   +L  M ++    +  +Y++++
Sbjct: 496 EGLFDEVKGILRKMEDNGCPANNITYNVIM 525



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 170/324 (52%), Gaps = 5/324 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A+   +E     + PN +T++ +I   C    + + + ++  M +   +PNV TF+IL
Sbjct: 220 DAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSIL 279

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ LCK G++++A EV+  M   G +P+I TY+ ++ G C  G+V+ A  +   +++ G+
Sbjct: 280 IDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGI 339

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           KP++++Y+ +++G+CK     +AM+L  E  ++G+ P+ VT++T+ +G  + G       
Sbjct: 340 KPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKK 399

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +   M +    PD   +STLL G  K+G +  A+ +F ++ R   + +      ++ GLC
Sbjct: 400 IFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLC 459

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                + D + +A+ +FEK+     + D  TY ++I    +    DE    L    + G 
Sbjct: 460 -----KNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGC 514

Query: 402 IPRTITFNNVIQALCGEGKIDKAL 425
               IT+N ++Q      KI + +
Sbjct: 515 PANNITYNVIMQGFFRSNKISEIV 538



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 162/326 (49%), Gaps = 7/326 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   I++ + +K+     ++  +N L+  L  L + E      SE  +  + PN  TFSI
Sbjct: 219 LDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSI 278

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C +    +A +V+  M + G  P++ T++ +++  C  G++  A  V + +   G
Sbjct: 279 LIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG 338

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KPNI +Y+ L+ G C    + +A ++   +   GLKPD  TY+ ++ G  +VGR  +A 
Sbjct: 339 IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAK 398

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS-YSTLLNG 304
           ++ +E +  G TP++   +TL  GY K G   + + L   + +RN     IS Y+ ++NG
Sbjct: 399 KIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL-ERNREDTNISFYTVVING 457

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K  ++R A +IF+++   G   D R  N ++ G C      + L ++   +  KM   
Sbjct: 458 LCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFC-----REGLFDEVKGILRKMEDN 512

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +  TY ++++   +  K  E +
Sbjct: 513 GCPANNITYNVIMQGFFRSNKISEIV 538



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 171/364 (46%), Gaps = 6/364 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           + S L + + +F  + +     SV DF+ L   ++ +      V  F E    G+  +  
Sbjct: 39  EVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDS 98

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
             +I+   YC ++    A  V+      G   NV TF  L+  L    ++ +A+ +  ++
Sbjct: 99  ILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKL 158

Query: 182 GRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            R   C+PN   Y  ++ GL   G  E+   +L  ++    KPDV TY+ V+D  CK   
Sbjct: 159 VREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDIN 218

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A+ LLNE  ++ + PN+ T+N+L +G CK G   K   LL  M   N  P+  ++S 
Sbjct: 219 LDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSI 278

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL K GK+  A  + + M+  G E D    ++++ G C++   ++     A +VF  
Sbjct: 279 LIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDR-----ARRVFNV 333

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           +  K    +  +Y I+I    K K   +A+       + G  P T+T++ ++  L   G+
Sbjct: 334 LRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGR 393

Query: 421 IDKA 424
           I  A
Sbjct: 394 IGDA 397



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 152/302 (50%), Gaps = 1/302 (0%)

Query: 40  AESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVML 98
           +E ++L  NP        +D + K   +++  ++   + + G    +  ++ ++    + 
Sbjct: 262 SEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLR 321

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
            + + A + F+     G+ PN +++SI+I  YC K +  +A ++   +   G  P+  T+
Sbjct: 322 GQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTY 381

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
           + +++ L + GR+ +A ++ D+M R+G  P+I  ++ LL G    G VEEA  +   ++ 
Sbjct: 382 STILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLER 441

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +    ++  YT V++G CK  R  EA  +  +    G+ P+V T+N +  G+C+EG   +
Sbjct: 442 NREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDE 501

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
             G+L+ M+   C  + I+Y+ ++ G  +  KI   VS  KEM   GF  D      L+ 
Sbjct: 502 VKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLIN 561

Query: 339 GL 340
            L
Sbjct: 562 VL 563



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 157/375 (41%), Gaps = 43/375 (11%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + AV  F         P+   FS + +   N   +     +   M   G   + +   I+
Sbjct: 44  DDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIV 103

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDG 220
            NS C   R+  A  VL    + G   N+ T+N LL GL    +V +A  +    V+   
Sbjct: 104 TNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKI 163

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT-PNVVTFNTLFNGYCKEGTPMKG 279
            +P+   Y  VM+G  K G + + + LL   +E+G T P+V T++ + +  CK+      
Sbjct: 164 CEPNEVMYGTVMNGLSKRGHTEKTLSLL-RIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + LL  MK++N  P+  +Y++L++GL K G+     ++  EMV      +    + L+ G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC +                                     GK +  DE +    H IE 
Sbjct: 283 LCKE-------------------------------------GKVEDADEVM---RHMIEK 302

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P  IT++ ++   C  G++D+A  +  ++ +    P+  SY +LI    + +    A
Sbjct: 303 GVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKA 362

Query: 460 CALYGAALKQGVIPQ 474
             L+G   ++G+ P 
Sbjct: 363 MQLFGEISQKGLKPD 377


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 196/392 (50%), Gaps = 11/392 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L +RI++   I++D     V  FN L+     L   + A     +    G  P++ TFS 
Sbjct: 106 LSKRIELL-RIERD-----VFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSS 159

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C ++ F  A +  D M  +GY PN+ T+  ++   CK G+   A+ +L +M + G
Sbjct: 160 LINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAG 219

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +P+I  YN ++ GLC    V EA ++   +K  G++PDV+TY+ +M G C   +  EA 
Sbjct: 220 GRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEAS 279

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L NE +   + P+VVTFN L +  CKEG   +  G++K+M ++   P+  +Y++L+NG 
Sbjct: 280 ALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGY 339

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
               K+  A  +F  M+  G   +    N L+ G C     +   +++A ++F++M+ + 
Sbjct: 340 CLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYC-----KAQRIDEARELFDEMSFRG 394

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            + +   Y  +I  L +  +  EA          G  P  +T   ++ +LC  G +D AL
Sbjct: 395 LIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNAL 454

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
            L   M +    P+  +YD+LI  + +  K Y
Sbjct: 455 RLFRAMQDSCLKPNLVTYDILIRAMYKSGKIY 486



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 183/381 (48%), Gaps = 5/381 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           + +F+ LL ALV +    T +          +  + + F+I+I C+        A  V+ 
Sbjct: 84  IVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLG 143

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   G+ P+  TF+ L+N LC   +   A+E  D+M   G +PN+ TYN ++KG C +G
Sbjct: 144 KIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIG 203

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +   A  +L  +   G +PD+  Y  ++DG CK    +EA+++ +E   +GV P+V T++
Sbjct: 204 KTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYS 263

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +G C      +   L   M   N +PD ++++ L++ L K G +  A  I K M+  
Sbjct: 264 ILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEK 323

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G E +    NSL+ G C+++      + +A  VF+ M  K  + +  +Y I+I    K +
Sbjct: 324 GVEPNYATYNSLMNGYCLQNK-----VFEARMVFDAMITKGCMPNVVSYNILINGYCKAQ 378

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + DEA          G IP T  +N +I  LC  G+  +A  L   M      P   +  
Sbjct: 379 RIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCT 438

Query: 445 MLITKLDQLEKSYDACALYGA 465
           +L+  L +L    +A  L+ A
Sbjct: 439 ILLDSLCKLGYLDNALRLFRA 459



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 158/321 (49%), Gaps = 5/321 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +  F  L+++L +       L +  ++  +  + ++  +N L+     + RV+ A+ +
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +PD  T++++++G C   +   AME  +E +  G  PN+ T+NT+  G+CK
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     VGLLK M K    PD + Y+T+++GL K   +  A+ IF E+   G   D   
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            + L+ GLC       D  E+A  +F +M     + D  T+ I++  L K     EA   
Sbjct: 262 YSILMHGLC-----NSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGI 316

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           +   IE G  P   T+N+++   C + K+ +A ++   M     +P+  SY++LI    +
Sbjct: 317 IKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCK 376

Query: 453 LEKSYDACALYGAALKQGVIP 473
            ++  +A  L+     +G+IP
Sbjct: 377 AQRIDEARELFDEMSFRGLIP 397



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 147/308 (47%), Gaps = 5/308 (1%)

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           C    +++AL   + M      P I  ++ LL  L  +        +   ++   ++ DV
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           + +  +++ F ++ R + A  +L + I+ G  P+ VTF++L NG C E    + +     
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M      P+  +Y+T++ G  K GK   AV + K+M + G   D  + N+++ GLC    
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLC---- 235

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            +  L+ +A  +F ++  K    D  TY I++  L    + +EA    +  + +  +P  
Sbjct: 236 -KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           +TFN ++  LC EG + +A  ++ +M E    P+  +Y+ L+       K ++A  ++ A
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDA 354

Query: 466 ALKQGVIP 473
            + +G +P
Sbjct: 355 MITKGCMP 362



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 1/207 (0%)

Query: 35  ASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLM 93
           AS    E + L   P  +     VD++ K   L E   I   + + G   + + +N L+ 
Sbjct: 278 ASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMN 337

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
              + N+   A   F    + G  PN  +++I+I  YC      EAR++ D M   G  P
Sbjct: 338 GYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIP 397

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N   +  L++ LC++GR  EA E+   M   GC P++ T   LL  LC +G ++ A  + 
Sbjct: 398 NTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLF 457

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             +++  LKP++ TY  ++    K G+
Sbjct: 458 RAMQDSCLKPNLVTYDILIRAMYKSGK 484



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 53/110 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E  ++FD +   G   +  ++N L+  L        A + F +  + G +P+  
Sbjct: 376 KAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLV 435

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           T +I++   C       A ++   M D+   PN+ T+ IL+ ++ KSG++
Sbjct: 436 TCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 233/478 (48%), Gaps = 20/478 (4%)

Query: 1   MSSLVPSNSFI--FTNTNR---RNHNKIPQFNKLVVFAAASLSTAESLDLKENPR--SLQ 53
           +S+  P+ +FI  F ++ R   + H+K  + N L+       S+   L L +NP   + Q
Sbjct: 11  ISNFTPNPNFIGLFPSSIRLFSQLHHKQDEENNLI-------SSFNHLLLHKNPTPPTFQ 63

Query: 54  AQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
             + +   +KA      + +   ++ +G       FN L+     L     +   F++  
Sbjct: 64  FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKIL 123

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
             G  P + TF+ +I+  C K    +A    D +   G+H +  ++  L+N LCK GR+ 
Sbjct: 124 KKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 183

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
            AL++L ++     +PN   YN ++  +C    V +A+++   +    + PDV+TY A++
Sbjct: 184 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALI 243

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
            GF  V + N A++L N+  +  + PNV TFN L +G+CKEG       +L +M K +  
Sbjct: 244 SGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIK 303

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD ++Y++L++G     K+  A  IF  M   G   + ++  +++ G C     +  +++
Sbjct: 304 PDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFC-----KIKMVD 358

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +A  +FE+M  +  + +  TY  +I  L K  +   AL  +    + G  P  +T+++++
Sbjct: 359 EAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSIL 418

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
            ALC    +DKA+ LL  + +    P   +Y +LI  L Q  +  DA  ++   L +G
Sbjct: 419 DALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 185/358 (51%), Gaps = 7/358 (1%)

Query: 34  AASLSTAESLDLK-ENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDL 91
            A+L   + +D K   P ++     +D + KA  + +  D++  +        V  +N L
Sbjct: 183 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNAL 242

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           +     +++   A+  F++     + PN +TF+I++  +C +    +A+ V+  M  +  
Sbjct: 243 ISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDI 302

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            P+V T+  L++  C   ++ +A ++ D M   G   N+Q Y  ++ G C +  V+EA  
Sbjct: 303 KPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAIN 362

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +   ++   + P+V TY++++DG CK+GR   A++L++E  +RG  PN+VT++++ +  C
Sbjct: 363 LFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALC 422

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           K     K + LL  +K +   PD  +Y+ L+ GL + G++  A ++F++++  G+ +D  
Sbjct: 423 KNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVY 482

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               +++G C K + +K     A  +  KM     + +  TY +VI +L +  + D A
Sbjct: 483 AYTVMIQGFCDKGFFDK-----ALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTA 535



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 196/407 (48%), Gaps = 5/407 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + +   D +   G +     +  L+  L  +     A++         + PN+  +++
Sbjct: 147 IHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM 206

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A  +   M      P+V T+  L++      +L  A+++ ++M +  
Sbjct: 207 IIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKEN 266

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ T+N L+ G C  G+V +A  +L  +  D +KPDV TY ++MDG+C + + N+A 
Sbjct: 267 INPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAK 326

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +     GV  NV  + T+ NG+CK     + + L + M+ R  +P+ ++YS+L++GL
Sbjct: 327 DIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGL 386

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I  A+ +  EM   G   +    +S+L  LC     +K     A  +   +  + 
Sbjct: 387 CKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDK-----AIALLTNLKDQG 441

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY I+I+ L +  + ++A       +  G+      +  +IQ  C +G  DKAL
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            LL  M ++  IP+  +Y+++I  L + +++  A  L    + +G++
Sbjct: 502 ALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 99/195 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E I++F+ ++      +V  ++ L+  L  L     A+K   E    G  PN  
Sbjct: 353 KIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIV 412

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S ++   C  +   +A  ++  + D G  P++ T+TIL+  LC+SGRL++A  V + +
Sbjct: 413 TYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDL 472

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   ++  Y  +++G C  G  ++A  +L  ++++G  P+  TY  V+    +   +
Sbjct: 473 LVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDEN 532

Query: 242 NEAMELLNEAIERGV 256
           + A +LL E I RG+
Sbjct: 533 DTAEKLLREMIVRGL 547


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 204/439 (46%), Gaps = 45/439 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ ID+F  + +     SV DFN L+  +V +   +  +  + +     +  + ++F+I
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+C+C+ +    A      +   G+ P+V TF+ L++ LC   R+ EAL++  QM    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM---- 173

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV------- 238
           C+PN+ T+  L+ GLC  GRV EA  +L  +  DGL+P+  TY  ++DG CK+       
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 239 -----------------------------GRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
                                        GR ++A  L  E  E+G+ P++ T+N + +G
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           +C  G   +   LL+ M +R   P+ ++YS L+N  +K  K   A  ++ EM+  G   +
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               NS++ G C     +++ L+ A  +F  M  K    D  T+  +I      K+ D+ 
Sbjct: 354 TITYNSMIDGFC-----KQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDG 408

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
              LH   E G +  T T+N +I   C  G ++ AL L   M      P   + + L+  
Sbjct: 409 TELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 468

Query: 450 LDQLEKSYDACALYGAALK 468
           L    K  DA  ++ A  K
Sbjct: 469 LCDNGKLKDALEMFKAMQK 487



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 184/381 (48%), Gaps = 16/381 (4%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   ++E    G+ P+ +T++ MI  +C+   + EA++++  M +   +PNV T++ L+N
Sbjct: 268 AHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALIN 327

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +  K  +  EA E+ D+M   G  PN  TYN ++ G C   R++ A  M   +   G  P
Sbjct: 328 AYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSP 387

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV+T+  ++DG+C   R ++  ELL+E  E G+  +  T+NTL +G+C  G     + L 
Sbjct: 388 DVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLS 447

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-----------GFEVDERM 332
           + M      PD ++ +TLL+GL   GK++ A+ +FK M +            G E D + 
Sbjct: 448 QQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQT 507

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+ GL      E   LE A +++++M  +  V +  TY  +I  L K  + DEA   
Sbjct: 508 YNILISGL----INEGKFLE-AEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQM 562

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
                     P  +TFN ++   C  G++D  L L   M     +    +Y  LI    +
Sbjct: 563 FDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRK 622

Query: 453 LEKSYDACALYGAALKQGVIP 473
           +     A  ++   +  GV P
Sbjct: 623 VGNINGALDIFQEMISSGVYP 643



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 158/314 (50%), Gaps = 16/314 (5%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D   K + L     +F  +   G +  V  FN L+         +   + 
Sbjct: 352 PNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTEL 411

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E +  GL  ++ T++ +I  +C   D   A  +   M  +G  P++ T   L++ LC 
Sbjct: 412 LHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 471

Query: 168 SGRLKEALEVLDQMGRI-----------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           +G+LK+ALE+   M +            G +P++QTYN L+ GL   G+  EA E+   +
Sbjct: 472 NGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEM 531

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            + G+ P+  TY+++++G CK  R +EA ++ +    +  +P+VVTFNTL +GYCK G  
Sbjct: 532 PHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRV 591

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
             G+ L   M +R  + D I+Y TL++G  K G I  A+ IF+EM+  G   D   + S+
Sbjct: 592 DDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSM 651

Query: 337 LRGLCMKSWEEKDL 350
           L  L    W +++L
Sbjct: 652 LTVL----WSKEEL 661



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 132/270 (48%), Gaps = 11/270 (4%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + +  ++   + + G     + +N L+    ++ +   A+    +  S G+ P+  T
Sbjct: 402 AKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 461

Query: 123 FSIMIRCYCNKNDFFEARKVIDCM------FD-----NGYHPNVTTFTILVNSLCKSGRL 171
            + ++   C+     +A ++   M       D     NG  P+V T+ IL++ L   G+ 
Sbjct: 462 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKF 521

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
            EA E+  +M   G  PN  TY+ ++ GLC   R++EA +M  ++ +    PDV T+  +
Sbjct: 522 LEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTL 581

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           + G+CK GR ++ +EL  E   RG+  + +T+ TL +G+ K G     + + + M     
Sbjct: 582 VSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGV 641

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            PD I+  ++L  L    +++ AV++ +++
Sbjct: 642 YPDTITIRSMLTVLWSKEELKRAVAMLEDL 671



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 10/241 (4%)

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           GF ++    +A++L ++ +     P+V+ FN L     +   P   + L + M+++    
Sbjct: 51  GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D  S++ L+       K+  A+S F ++ + GF+ D    ++LL GLC+     +D + +
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCV-----EDRVSE 165

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A  +F +M +   V    T+  ++  L +  +  EA+  L   +E G  P  IT+  ++ 
Sbjct: 166 ALDLFHQMCRPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 221

Query: 414 ALCGEGKIDKALLLLFLMYEHAKI-PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            +C  G    AL LL  M E + I P+   Y  +I  L +  +  DA  LY    ++G+ 
Sbjct: 222 GMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIF 281

Query: 473 P 473
           P
Sbjct: 282 P 282



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 122/314 (38%), Gaps = 45/314 (14%)

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L  G   +  +E+A ++  ++      P V  +  +M    ++ R +  + L  +   + 
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           +  +V +FN L   +C        +     + K    PD +++STLL+GL    ++  A+
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +F +M R        +MN L R        E  ++E A  + ++M +     +  TYG 
Sbjct: 168 DLFHQMCRPNVVTFTTLMNGLCR--------EGRVVE-AVALLDRMVEDGLQPNQITYGT 218

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHI--------------------------------- 402
           ++  + K   T  AL  L    EM HI                                 
Sbjct: 219 IVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEK 278

Query: 403 ---PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
              P   T+N +I   C  G+  +A  LL  M E    P+  +Y  LI    +  K ++A
Sbjct: 279 GIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEA 338

Query: 460 CALYGAALKQGVIP 473
             LY   L +G+IP
Sbjct: 339 EELYDEMLPRGIIP 352



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 50/120 (41%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S L E   +FDS+     +  V  FN L+         +  ++ F E    G+  ++ 
Sbjct: 552 KQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAI 611

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I  +    +   A  +   M  +G +P+  T   ++  L     LK A+ +L+ +
Sbjct: 612 TYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 185/379 (48%), Gaps = 5/379 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V DFN L   +  +    TA+      S  G+ PN  T +I+I C C  N       V+ 
Sbjct: 26  VKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLG 85

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            MF  G  P++ TFT +VN LC  G + +A+  +D +  +G + +  T   ++ GLC VG
Sbjct: 86  LMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVG 145

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A   L  ++      DV  Y+AV+DG CK G   EA++L ++   +G+ PN+ T+N
Sbjct: 146 HSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYN 205

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +G C      +   LL  M ++  +PD  +++ +    LK G I  A SIF  M   
Sbjct: 206 CLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHM 265

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G E +    NS++   CM +      ++DA +VF+ M +K  + +  TY  +I    + K
Sbjct: 266 GIEHNVVTYNSIIGAHCMLNQ-----MKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETK 320

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             ++A+  L   +  G  P  +T++ +I   C  GK   A  L F+M++H ++P   +  
Sbjct: 321 NMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCA 380

Query: 445 MLITKLDQLEKSYDACALY 463
           +++  L +     +A +L+
Sbjct: 381 IILDGLFKCHFHSEAMSLF 399



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 198/415 (47%), Gaps = 25/415 (6%)

Query: 53  QAQRFVDRIK----ASPLKERIDIFDSIKKDG----------------TNWSVSDFNDLL 92
           QA RFVD +K     S    R  I + + K G                 N  V+ ++ ++
Sbjct: 114 QAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVV 173

Query: 93  MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
             L        A+  FS+ +  G+ PN +T++ +I   CN + + EA  ++  M   G  
Sbjct: 174 DGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIM 233

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P+V TF ++     K+G +  A  +   MG +G + N+ TYN ++   C + ++++A E+
Sbjct: 234 PDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEV 293

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G  P++ TY +++ G+C+    N+AM  L E +  G+ P+VVT++TL  G+CK
Sbjct: 294 FDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCK 353

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G P+    L  +M K   LPD  + + +L+GL K      A+S+F+E+ +   ++D  +
Sbjct: 354 AGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIII 413

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            + +L G+C         L DA ++F  ++ K    D  TY I+I  L K    D+A   
Sbjct: 414 YSIILNGMC-----SSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDL 468

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           L    E G  P   T+N  +Q L    +I K+   L  M       + T+  +LI
Sbjct: 469 LMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLI 523



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 179/403 (44%), Gaps = 30/403 (7%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G   S+  F  ++  L +      A++F       G   + +T   +I   C      
Sbjct: 89  KIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSS 148

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
            A   +  M +   + +VT ++ +V+ LCK G + EAL++  QM   G +PN+ TYNCL+
Sbjct: 149 AALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLI 208

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            GLC   R +EA  +L N+   G+ PDV T+  +   F K G  + A  + +     G+ 
Sbjct: 209 HGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIE 268

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            NVVT+N++   +C        + +  LM ++ CLP+ ++Y++L++G  +   +  A+  
Sbjct: 269 HNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYF 328

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLL------------------------ 351
             EMV  G + D    ++L+ G C   K    K+L                         
Sbjct: 329 LGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFK 388

Query: 352 ----EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
                +A  +F ++ K  S  D   Y I++  +    K ++AL    +    G     +T
Sbjct: 389 CHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVT 448

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +N +I  LC EG +D A  LL  M E+   P   +Y++ +  L
Sbjct: 449 YNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGL 491



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 38/285 (13%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           A RF   +K   +     IF  +   G   +V  +N ++ A  MLN+ + A++ F     
Sbjct: 243 AGRF---LKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIR 299

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
            G  PN  T++ +I  +C   +  +A   +  M +NG  P+V T++ L+   CK+G+   
Sbjct: 300 KGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVA 359

Query: 174 ALEVLDQMGRIGCKPNIQT-----------------------------------YNCLLK 198
           A E+   M + G  P++QT                                   Y+ +L 
Sbjct: 360 AKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILN 419

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           G+C  G++ +A E+   + + G+K DV TY  +++G CK G  ++A +LL +  E G  P
Sbjct: 420 GMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPP 479

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           +  T+N    G  +     K    L  MK +    +  +   L+N
Sbjct: 480 DECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLIN 524



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 1/148 (0%)

Query: 101 QETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
              A+  F E        +   +SI++   C+     +A ++   +   G   +V T+ I
Sbjct: 392 HSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNI 451

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           ++N LCK G L +A ++L +M   GC P+  TYN  ++GL     + ++ + LM +K  G
Sbjct: 452 MINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKG 511

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELL 248
            + +  T T ++  +    + N A ++ 
Sbjct: 512 FRANA-TTTKLLINYFSANKENRAFQVF 538


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 163/305 (53%), Gaps = 5/305 (1%)

Query: 85   VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
            V  +  ++     + +   A K F E    GL P+S TF+ +I  YC      +A +V +
Sbjct: 829  VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 888

Query: 145  CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
             M   G  PNV T+T L++ LCK G L  A E+L +M +IG +PNI TYN ++ GLC  G
Sbjct: 889  HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 948

Query: 205  RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
             +EEA +++   +  GL  D  TYT +MD +CK G  ++A E+L E + +G+ P +VTFN
Sbjct: 949  NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 1008

Query: 265  TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
             L NG+C  G    G  LL  M  +   P+  ++++L+        ++ A +I+K+M   
Sbjct: 1009 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 1068

Query: 325  GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
            G   D +   +L++G C     +   +++A+ +F++M  K       TY ++I+   K K
Sbjct: 1069 GVGPDGKTYENLVKGHC-----KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 1123

Query: 385  KTDEA 389
            K  EA
Sbjct: 1124 KFLEA 1128



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 189/407 (46%), Gaps = 5/407 (1%)

Query: 70   IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
            I +F    + G  W+V+ +N ++  +  L   + A          G  P+  ++S ++  
Sbjct: 674  IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 733

Query: 130  YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            YC   +  +  K+I+ M   G  PN   +  ++  LC+  +L EA E   +M R G  P+
Sbjct: 734  YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 793

Query: 190  IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
               Y  L+ G C  G +  A +    + +  + PDV TYTA++ GFC++G   EA +L +
Sbjct: 794  TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 853

Query: 250  EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
            E   +G+ P+ VTF  L NGYCK G       +   M +  C P+ ++Y+TL++GL K G
Sbjct: 854  EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 913

Query: 310  KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
             +  A  +  EM + G + +    NS++ GLC     +   +E+A ++  +        D
Sbjct: 914  DLDSANELLHEMWKIGLQPNIFTYNSIVNGLC-----KSGNIEEAVKLVGEFEAAGLNAD 968

Query: 370  PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
              TY  ++    K  + D+A   L   +  G  P  +TFN ++   C  G ++    LL 
Sbjct: 969  TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 1028

Query: 430  LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
             M      P+ T+++ L+ +         A A+Y     +GV P  K
Sbjct: 1029 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 1075



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 193/409 (47%), Gaps = 6/409 (1%)

Query: 66   LKERIDIFDSIKKDGTNWSVSDFNDLLMALVM-LNEQETAVKFFSEASSYGLAPNSWTFS 124
            L+E   +F+ +   G   SV   N  L  L     +  TA+  F E    G+  N  +++
Sbjct: 634  LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 693

Query: 125  IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            I+I   C      EA  ++  M   GY P+V +++ +VN  C+ G L +  ++++ M R 
Sbjct: 694  IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753

Query: 185  GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
            G KPN   Y  ++  LC + ++ EA E    +   G+ PD   YT ++DGFCK G    A
Sbjct: 754  GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 813

Query: 245  MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             +   E   R +TP+V+T+  + +G+C+ G  ++   L   M  +   PD ++++ L+NG
Sbjct: 814  SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 873

Query: 305  LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
              K G ++ A  +   M++ G   +     +L+ GLC    +E D L+ A ++  +M K 
Sbjct: 874  YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC----KEGD-LDSANELLHEMWKI 928

Query: 365  VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
                +  TY  ++  L K    +EA+  +      G    T+T+  ++ A C  G++DKA
Sbjct: 929  GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 988

Query: 425  LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              +L  M      P+  ++++L+          D   L    L +G+ P
Sbjct: 989  QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1037



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 133/273 (48%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            KA  +K+   + + + + G + +V  +  L+  L    + ++A +   E    GL PN +
Sbjct: 876  KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 935

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T++ ++   C   +  EA K++      G + +  T+T L+++ CKSG + +A E+L +M
Sbjct: 936  TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               G +P I T+N L+ G C  G +E+  ++L  +   G+ P+  T+ +++  +C     
Sbjct: 996  LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 1055

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
              A  +  +   RGV P+  T+  L  G+CK     +   L + MK +       +YS L
Sbjct: 1056 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 1115

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
            + G LK  K   A  +F +M R G   D+ + +
Sbjct: 1116 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 89/192 (46%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K+  + +  +I   +   G   ++  FN L+    +    E   K  +   + G+APN+ 
Sbjct: 981  KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 1040

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            TF+ +++ YC +N+   A  +   M   G  P+  T+  LV   CK+  +KEA  +  +M
Sbjct: 1041 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 1100

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               G   ++ TY+ L+KG     +  EA E+   ++ +GL  D   +    D   K  R 
Sbjct: 1101 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRP 1160

Query: 242  NEAMELLNEAIE 253
            +  ++ ++E IE
Sbjct: 1161 DTIVDPIDEIIE 1172


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 168/318 (52%), Gaps = 5/318 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD +K+         +  ++  L    +   A K FSE  S GL P+  T++ +I  YC
Sbjct: 379 LFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYC 438

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +  EA  + + M + G  PNV T+T LV+ LCK G +  A E+L +M   G +PN+ 
Sbjct: 439 KAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVC 498

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ GLC VG +E+A +++  +   G  PD  TYT +MD +CK+G   +A ELL   
Sbjct: 499 TYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIM 558

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+ P +VTFN L NG+C  G    G  L+K M  +  +P+  ++++L+        +
Sbjct: 559 LDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNM 618

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           R  + I+K M   G   D    N L++G C     +   +++A+ + ++M +K       
Sbjct: 619 RATIEIYKGMHAQGVVPDTNTYNILIKGHC-----KARNMKEAWFLHKEMVEKGFSLTAA 673

Query: 372 TYGIVIRTLGKGKKTDEA 389
           +Y  +I+   K KK +EA
Sbjct: 674 SYNSLIKGFYKRKKFEEA 691



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 208/414 (50%), Gaps = 6/414 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALV-MLNEQETAVKFFSEASSYGLAPN 119
           ++A  L E   +FD +   G   SV   N  L  L    +   TA + F E S  G+  N
Sbjct: 192 VEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWN 251

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           + +++I++   C      EA  ++  M   G  P+V +++++V+  C+  +L + L++++
Sbjct: 252 TVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLME 311

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           ++ R G KPN  TYN ++  LC  GRV EA ++L  +KN  + PD   YT ++ GF K G
Sbjct: 312 ELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSG 371

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
             +   +L +E   + + P+ VT+ ++ +G C+ G  ++   L   M  +   PD+++Y+
Sbjct: 372 NVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYT 431

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L++G  K G+++ A S+  +MV  G   +     +L+ GLC     E D+   A ++  
Sbjct: 432 ALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLC--KCGEVDI---ANELLH 486

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M++K    +  TY  +I  L K    ++A+  +      G  P TIT+  ++ A C  G
Sbjct: 487 EMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMG 546

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++ KA  LL +M +    P+  ++++L+          D   L    L +G++P
Sbjct: 547 EMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMP 600



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 178/367 (48%), Gaps = 5/367 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
            +K   E    GL PN +T++ +I   C      EA +V+  M +    P+   +T L++
Sbjct: 306 VLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLIS 365

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
              KSG +    ++ D+M R    P+  TY  ++ GLC  G+V EA ++   + + GLKP
Sbjct: 366 GFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKP 425

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D  TYTA++DG+CK G   EA  L N+ +E+G+TPNVVT+  L +G CK G       LL
Sbjct: 426 DEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELL 485

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M ++   P+  +Y+ L+NGL K G I  AV + +EM   GF  D     +++   C  
Sbjct: 486 HEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYC-- 543

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   +  A+++   M  K       T+ +++         ++    +   ++ G +P
Sbjct: 544 ---KMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMP 600

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
              TFN++++  C    +   + +   M+    +P   +Y++LI    +     +A  L+
Sbjct: 601 NATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLH 660

Query: 464 GAALKQG 470
              +++G
Sbjct: 661 KEMVEKG 667



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 191/402 (47%), Gaps = 5/402 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F    + G  W+   +N +L  L  L + + A     +    G  P+  ++S+++  YC
Sbjct: 239 VFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYC 298

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +  K+++ +   G  PN  T+  +++ LCK+GR+ EA +VL  M      P+  
Sbjct: 299 QVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNV 358

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            Y  L+ G    G V   Y++   +K   + PD  TYT+++ G C+ G+  EA +L +E 
Sbjct: 359 VYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM 418

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           + +G+ P+ VT+  L +GYCK G   +   L   M ++   P+ ++Y+ L++GL K G++
Sbjct: 419 LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEV 478

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +  EM   G + +    N+L+ GLC     +   +E A ++ E+M       D  
Sbjct: 479 DIANELLHEMSEKGLQPNVCTYNALINGLC-----KVGNIEQAVKLMEEMDLAGFFPDTI 533

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  ++    K  +  +A   L   ++ G  P  +TFN ++   C  G ++    L+  M
Sbjct: 534 TYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWM 593

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   +P+ T+++ L+ +            +Y     QGV+P
Sbjct: 594 LDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVP 635



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 108/233 (46%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   + + G   +V  +N L+  L  +   E AVK   E    G  P++ T++ ++  Y
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +  +A +++  M D G  P + TF +L+N  C SG L++   ++  M   G  PN 
Sbjct: 543 CKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNA 602

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            T+N L+K  C    +    E+   +   G+ PD  TY  ++ G CK     EA  L  E
Sbjct: 603 TTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKE 662

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
            +E+G +    ++N+L  G+ K     +   L + M+    + +K  Y   ++
Sbjct: 663 MVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVD 715


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 210/435 (48%), Gaps = 37/435 (8%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  +   G + +V  F  ++ A  M+NE ++A     + + +G  PNS  + ++I   
Sbjct: 186 NVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHAL 245

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM--------- 181
              N   EA K+++ MF  G  P+V TF  +++ LCK+GR+ EA ++ D+M         
Sbjct: 246 SENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADA 305

Query: 182 ----------GRIG------------CKPNIQTYNCLLKGLCYVGRVEEAYEMLM-NVKN 218
                      R+G              PN   YN L+ G    GR EEA ++L  N+  
Sbjct: 306 LIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVI 365

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            G +PD +T+  ++DG CK G    A+E L+E +++G  PNV+T+  L +G+CK+G   +
Sbjct: 366 AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              ++  M  +    + + Y+ L+  L K GKI+ A+ ++ EM   G + D    NSL+ 
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY 485

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           GLC     + D +E+A  ++  M  +  + +  TY  +I    + +   +A   +     
Sbjct: 486 GLC-----KNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF 540

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G     IT+N +I+ALC  G  +K L L+  M+     PS  S ++LI    +  K  D
Sbjct: 541 RGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVND 600

Query: 459 ACALYGAALKQGVIP 473
           A       +++G+ P
Sbjct: 601 ALQFLRDMIQRGLTP 615



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 168/335 (50%), Gaps = 9/335 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+++TF+IMI   C K     A + +D M   G+ PNV T+TIL++  CK G  +EA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            +V++ M   G   N   YNCL+  LC  G++++A +M   + + G KPD+YT+ +++ G
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK  +  EA+ L  + +  GV  N VT+NTL + + +     +   L+  M+ R C  D
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM--MNSLLRGLCMKSWEEKDLLE 352
            I+Y+ L+  L K G     + + ++M  FG E+   +   N L+   C         + 
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQM--FGEEIFPSINSCNILINSFC-----RTGKVN 599

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           DA Q    M ++    D  TY  +I  L K  +  EAL   +     G  P  +T+N +I
Sbjct: 600 DALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              C EG  + A  LLF    +  IP+  ++ +LI
Sbjct: 660 SRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 189/378 (50%), Gaps = 10/378 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N +L  LV  N  + A   F +  S G++P  +TF ++++ +C  N+   A  ++  M 
Sbjct: 168 YNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMT 227

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G  PN   + +L+++L ++ R+ EA+++L++M  +GC+P++QT+N ++ GLC  GR+ 
Sbjct: 228 KHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIH 287

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA ++   +       D      +M G C++G+ +EA  +L++       PN V +NTL 
Sbjct: 288 EAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKI----PNPNTVLYNTLI 343

Query: 268 NGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
           NGY   G   +   LL K M      PD  +++ +++GL K G +  A+    EMV+ GF
Sbjct: 344 NGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGF 403

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           E +      L+ G C     ++   E+A +V   M+ K    +   Y  +I  L K  K 
Sbjct: 404 EPNVITYTILIDGFC-----KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +AL         G  P   TFN++I  LC   K+++AL L   M     I +  +Y+ L
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518

Query: 447 ITKLDQLEKSYDACALYG 464
           I    +LE    A  L G
Sbjct: 519 IHAFLRLELIQQADKLVG 536



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 167/360 (46%), Gaps = 10/360 (2%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           Y   P   ++++++      N    A  V   M   G  P V TF +++ + C    +  
Sbjct: 159 YCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDS 218

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A  +L  M + GC PN   Y  L+  L    RV EA ++L  +   G +PDV T+  V+ 
Sbjct: 219 ACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIH 278

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G CK GR +EA +L +  + R  T + +    L +G C+ G   +   +L  +      P
Sbjct: 279 GLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----P 334

Query: 294 DKISYSTLLNGLLKWGKIRPAVSI-FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           + + Y+TL+NG +  G+   A  + +K MV  GFE D    N ++ GLC K +     L 
Sbjct: 335 NTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGY-----LV 389

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A +  ++M KK    +  TY I+I    K    +EA   ++     G    T+ +N +I
Sbjct: 390 SALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLI 449

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            ALC +GKI  AL +   M      P   +++ LI  L + +K  +A  LY   L +GVI
Sbjct: 450 GALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVI 509



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 140/269 (52%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    +E   + +S+   G + +   +N L+ AL    + + A++ + E SS G  P+ +
Sbjct: 419 KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIY 478

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C  +   EA  +   M   G   N  T+  L+++  +   +++A +++ +M
Sbjct: 479 TFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM 538

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  +  TYN L+K LC  G  E+   ++  +  + + P + +   +++ FC+ G+ 
Sbjct: 539 RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKV 598

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           N+A++ L + I+RG+TP++VT+N+L NG CK G   + + L   ++ +   PD ++Y+TL
Sbjct: 599 NDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTL 658

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           ++     G    A  +  + V  GF  +E
Sbjct: 659 ISRYCYEGLFNDACQLLFKGVSNGFIPNE 687



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 180/417 (43%), Gaps = 28/417 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   ++  D + K G   +V  +  L+         E A K  +  S+ GL+ N+ 
Sbjct: 384 KKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTV 443

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C      +A ++   M   G  P++ TF  L+  LCK+ +++EAL +   M
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDM 503

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   N  TYN L+     +  +++A +++  ++  G   D  TY  ++   CK G +
Sbjct: 504 LLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGAT 563

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            + + L+ +     + P++ + N L N +C+ G     +  L+ M +R   PD ++Y++L
Sbjct: 564 EKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSL 623

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K G+ + A+++F  +   G   D    N+L+   C +      L  DA Q+  K 
Sbjct: 624 INGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEG-----LFNDACQLLFKG 678

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL------------HHAIEMGHI------- 402
                + +  T+ I+I    K     E    L             H   +G I       
Sbjct: 679 VSNGFIPNEITWSILINYFVKNNSDSEQFTILMGNWGFWLAAIIRHVSSIGCIAIFMWQI 738

Query: 403 ---PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
              P +I  NN+  A+ G   +D +LL  F+   H  I     ++ L+  + Q+  +
Sbjct: 739 FGFPPSI-INNLHIAVSGNFAVDTSLLKDFVFAIHNFIGIGRVHEYLLLVISQIAAT 794



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 43/102 (42%)

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           +Y +V+  L  G     A    +  +  G  P   TF  V++A C   ++D A  LL  M
Sbjct: 167 SYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDM 226

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +H  +P+   Y MLI  L +  +  +A  L       G  P
Sbjct: 227 TKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEP 268


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 199/410 (48%), Gaps = 27/410 (6%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E   +F +++  G   ++  +N ++     +   + A++ + E    GL PN  TF
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTF 301

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
            I+I   C  ++   ARK +  M   G  PN+  +  L++  CK+G L EAL +  ++ +
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P++ TY+ L+KGLC V R+EEA  +L  +K  G  P+  TY  ++DG+CK G   +
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A+E+ ++  E+G+ PN++TF+TL +GYCK G     +GL   M  +  LPD ++Y+ L++
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           G  K G  + A  + KEM   G   +   ++ L+ GLC     +   + DA ++F     
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC-----KDGRISDAIKLF----- 531

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
            ++ T   T G       K  + D +L            P  + +  +IQ LC +G+I K
Sbjct: 532 -LAKTGTDTTG------SKTNELDRSLCS----------PNHVMYTALIQGLCTDGRIFK 574

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A      M      P   +  ++I    +     D   L    LK G+IP
Sbjct: 575 ASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIP 624



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 178/377 (47%), Gaps = 5/377 (1%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N +L  LV     +T  K + +  + G +PN  T+  +I   C + DF +A ++ D M +
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
               P V  +TIL+  LC   R+ EA  +   M   G  PN+ TYN ++ G C +  V++
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A E+   +  DGL P+V T+  ++DG CK      A + L +    GV PN+  +N L +
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           GYCK G   + + L   ++K   LPD  +YS L+ GL    ++  A  + +EM + GF  
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +    N+L+ G C +   EK     A +V  +MT+K    +  T+  +I    K  K + 
Sbjct: 402 NAVTYNTLIDGYCKEGNMEK-----AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEA 456

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A+      +  G +P  + +  +I     +G   +A  L   M E    P+  +   LI 
Sbjct: 457 AMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLID 516

Query: 449 KLDQLEKSYDACALYGA 465
            L +  +  DA  L+ A
Sbjct: 517 GLCKDGRISDAIKLFLA 533



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 191/386 (49%), Gaps = 16/386 (4%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  +   G + +V  +  L+       +   A + F E     + P    ++I+IR  C
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLC 239

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            ++   EA  +   M ++G  PN+ T+  +++  CK   +K+ALE+  +M   G  PN+ 
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVV 299

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+  L+ GLC    +  A + L+++ + G+ P+++ Y  ++DG+CK G  +EA+ L +E 
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            +  + P+V T++ L  G C      +  GLL+ MKK+  LP+ ++Y+TL++G  K G +
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ +  +M   G E +    ++L+ G C     +   +E A  ++ +M  K  + D  
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYC-----KAGKMEAAMGLYTEMVIKGLLPDVV 474

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAI-EMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            Y  +I    K   T EA   LH  + E G  P   T + +I  LC +G+I  A+ L   
Sbjct: 475 AYTALIDGHFKDGNTKEAF-RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL- 532

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKS 456
                   ++T  D   +K ++L++S
Sbjct: 533 --------AKTGTDTTGSKTNELDRS 550



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 154/280 (55%), Gaps = 2/280 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + +K+ ++++  +  DG   +V  F  L+  L   +E  +A KF  + +S+G+ PN +
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  YC   +  EA  +   +  +   P+V T++IL+  LC   R++EA  +L +M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  PN  TYN L+ G C  G +E+A E+   +   G++P++ T++ ++DG+CK G+ 
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             AM L  E + +G+ P+VV +  L +G+ K+G   +   L K M++    P+  + S L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           ++GL K G+I  A+ +F  + + G +      N L R LC
Sbjct: 515 IDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLC 552



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 149/321 (46%), Gaps = 5/321 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +    ++++ L K GR     +V   M   G  PN+ TY  L+ G C  G   +A+ +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +    + P V  YT ++ G C   R +EA  +       G+ PN+ T+NT+ +GYCK
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                K + L + M     LP+ +++  L++GL K  ++  A     +M  FG   +  +
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+ G C     +   L +A  +  ++ K   + D  TY I+I+ L    + +EA   
Sbjct: 336 YNCLIDGYC-----KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L    + G +P  +T+N +I   C EG ++KA+ +   M E    P+  ++  LI    +
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 453 LEKSYDACALYGAALKQGVIP 473
             K   A  LY   + +G++P
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLP 471



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 146/314 (46%), Gaps = 18/314 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E + +   I+K      V  ++ L+  L  ++  E A     E    G  PN+ 
Sbjct: 345 KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  YC + +  +A +V   M + G  PN+ TF+ L++  CK+G+++ A+ +  +M
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++  Y  L+ G    G  +EA+ +   ++  GL P+V+T + ++DG CK GR 
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524

Query: 242 NEAMELL-------------NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           ++A++L              NE      +PN V +  L  G C +G   K       M+ 
Sbjct: 525 SDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRC 584

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
               PD  +   ++ G  +   +R  + +  ++++ G      + NS +  +  K +EE 
Sbjct: 585 SGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGI-----IPNSSVYRVLAKGYEES 639

Query: 349 DLLEDAYQVFEKMT 362
             L+ A +  E ++
Sbjct: 640 GYLKSALRCSEDLS 653



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 10/217 (4%)

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
           TPNV  F  L   + + G   +    L +  K + LP   + + +L+GL+K G+      
Sbjct: 125 TPNV--FGVLIIAFSEMGLVEEA---LWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWK 179

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           ++ +MV  G   +     +L+ G C     + D L+ A+++F++M +K        Y I+
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCC----RQGDFLK-AFRLFDEMIEKKIFPTVVIYTIL 234

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           IR L    +  EA          G +P   T+N ++   C    + KAL L   M     
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGL 294

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +P+  ++ +LI  L + ++   A          GV+P
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 204/443 (46%), Gaps = 40/443 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++ +S+   G   ++  +N ++  L        A   F+E  S GL+P++ T++ 
Sbjct: 236 LGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF--------------------------- 158
           ++   C  N+F EA+ +   M   G  P++ +F                           
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG 355

Query: 159 --------TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
                   TIL+N  C++G + EALE+ D+M   GC  ++  YN +L GLC    + +A 
Sbjct: 356 LVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADAN 415

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +   G+ PD  T+T ++ G CK G   +A+ L     ++ + P++VT+N L +G+
Sbjct: 416 ALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGF 475

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK     K   L   M  R   P+ ISY+ L+NG    G +  A  ++ EM+R G +   
Sbjct: 476 CKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTL 535

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N++++G C +S +    L  A +   KM  +    D  TY  +I    KG+  D+A 
Sbjct: 536 VTCNTVIKGYC-RSGD----LSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAF 590

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             ++     G  P  +T+N ++   C +G++ +A L+L  M E    P R++Y  LI   
Sbjct: 591 FLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGY 650

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
              +   +A   +   L++G +P
Sbjct: 651 VSQDNLKEAFRFHDEMLQRGFVP 673



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 203/413 (49%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++A  L E  D F  +++ G   S++  N LL  LV +   + A + ++E +  G+  N 
Sbjct: 126 VQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNV 185

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T +IM+   C  +   + +  +  M   G   ++ T+  L+N+ C+ G L EA EV++ 
Sbjct: 186 YTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNS 245

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G KP + TYN ++ GLC  GR   A  +   + + GL PD  TY  ++   C+   
Sbjct: 246 MSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNN 305

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA ++ ++ + RGV+P++++F++L     + G   + +   + MK    +PD + Y+ 
Sbjct: 306 FLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTI 365

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NG  + G +  A+ I  +M+  G  +D    N++L GLC     +K LL DA  +F++
Sbjct: 366 LINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLC-----KKKLLADANALFDE 420

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++  V D  T+  +I    K     +AL       +    P  +T+N +I   C   +
Sbjct: 421 MVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE 480

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++KA  L   M      P+  SY +L+     L    +A  L+   +++G+ P
Sbjct: 481 MEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKP 533



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 172/382 (45%), Gaps = 5/382 (1%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            V+  + +   E  DIF  +   G +  +  F+ L+         + A+ +F +  + GL
Sbjct: 297 LVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGL 356

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P++  ++I+I  YC      EA ++ D M + G   +V  +  ++N LCK   L +A  
Sbjct: 357 VPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANA 416

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           + D+M   G  P+  T+  L+ G C  G + +A  +   +    +KPD+ TY  ++DGFC
Sbjct: 417 LFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFC 476

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K     +A EL NE I R + PN +++  L NGYC  G   +   L   M ++   P  +
Sbjct: 477 KTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLV 536

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           + +T++ G  + G +  A     +M+  G   D    N+L+ G     + +K     A+ 
Sbjct: 537 TCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDK-----AFF 591

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +  KM  K    D  TY +++    +  +  EA + L   IE G  P   T+  +I    
Sbjct: 592 LINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYV 651

Query: 417 GEGKIDKALLLLFLMYEHAKIP 438
            +  + +A      M +   +P
Sbjct: 652 SQDNLKEAFRFHDEMLQRGFVP 673



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 156/304 (51%), Gaps = 5/304 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E ++I D + + G    V  +N +L  L        A   F E    G+ P+  TF+ 
Sbjct: 376 MSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTT 435

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C + +  +A  +   M      P++ T+ IL++  CK+  +++A E+ ++M    
Sbjct: 436 LIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  +Y  L+ G C +G V EA+ +   +   G+KP + T   V+ G+C+ G  ++A 
Sbjct: 496 IFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKAD 555

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E L + I  GV P+ +T+NTL NG+ K     K   L+  M+ +   PD ++Y+ +LNG 
Sbjct: 556 EFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGF 615

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G+++ A  I ++M+  G + D     +L+ G     +  +D L++A++  ++M ++ 
Sbjct: 616 CRQGRMQEAELILRKMIERGIDPDRSTYTTLING-----YVSQDNLKEAFRFHDEMLQRG 670

Query: 366 SVTD 369
            V D
Sbjct: 671 FVPD 674



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 136/259 (52%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + + G       F  L+           A+  F   +   + P+  T++I+I  +C
Sbjct: 417 LFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFC 476

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +  +A ++ + M      PN  ++ ILVN  C  G + EA  + D+M R G KP + 
Sbjct: 477 KTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLV 536

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T N ++KG C  G + +A E L  + ++G+ PD  TY  +++GF K    ++A  L+N+ 
Sbjct: 537 TCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKM 596

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             +G+ P+VVT+N + NG+C++G   +   +L+ M +R   PD+ +Y+TL+NG +    +
Sbjct: 597 ETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNL 656

Query: 312 RPAVSIFKEMVRFGFEVDE 330
           + A     EM++ GF  D+
Sbjct: 657 KEAFRFHDEMLQRGFVPDD 675



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/429 (22%), Positives = 184/429 (42%), Gaps = 45/429 (10%)

Query: 85  VSDFNDLLMALVM---LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           +SD   L++ ++    ++  E      S +S+ G+  ++  F ++IR Y       E   
Sbjct: 79  LSDAQTLILRMIRRSGVSRVEIVESLISMSSTCGV--DNLVFDLLIRSYVQARKLNEGTD 136

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
               +   G+  ++     L+  L K G +  A EV +++ R G + N+ T N ++  LC
Sbjct: 137 TFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALC 196

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
              ++++    L++++  G+  D+ TY  +++ +C+ G   EA E++N    +G+ P + 
Sbjct: 197 KDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLF 256

Query: 262 TFNTLFNGYCKEGTPMKGVG-----------------------------------LLKLM 286
           T+N + NG CK+G  ++  G                                   +   M
Sbjct: 257 TYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDM 316

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
             R   PD IS+S+L+    + G +  A+  F++M   G   D  +   L+ G C     
Sbjct: 317 LHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYC----- 371

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
              ++ +A ++ +KM ++    D   Y  ++  L K K   +A       +E G +P   
Sbjct: 372 RNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFC 431

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           TF  +I   C EG + KAL L  +M +    P   +Y++LI    +  +   A  L+   
Sbjct: 432 TFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEM 491

Query: 467 LKQGVIPQR 475
           + + + P  
Sbjct: 492 ISRKIFPNH 500



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 118/233 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + +F  + +      +  +N L+       E E A + ++E  S  + PN  
Sbjct: 442 KEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHI 501

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I++  YCN     EA ++ D M   G  P + T   ++   C+SG L +A E L +M
Sbjct: 502 SYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKM 561

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TYN L+ G      +++A+ ++  ++  GL+PDV TY  +++GFC+ GR 
Sbjct: 562 ISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRM 621

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            EA  +L + IERG+ P+  T+ TL NGY  +    +       M +R  +PD
Sbjct: 622 QEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 191/386 (49%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+     +N  + A +      S   +P++ T++IMI   C++     A KV+D + 
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +   P V T+TIL+ +    G + EAL++LD+M   G KP++ TYN +++G+C  G V+
Sbjct: 217 SDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 276

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A+EM+ N++  G +PDV +Y  ++      G+  E  +L+ +       PNVVT++ L 
Sbjct: 277 RAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 336

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              C++G   + + LLKLMK++   PD  SY  L+    + G++  A+   + M+  G  
Sbjct: 337 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 396

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    N++L  LC     ++     A ++F K+ +     +  +Y  +   L       
Sbjct: 397 PDIVNYNTVLATLCKNGKADQ-----ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 451

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            AL  +   +  G  P  IT+N++I  LC EG +DKA  LL  M      PS  +Y++++
Sbjct: 452 RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVL 511

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +  +  DA  +  + +  G  P
Sbjct: 512 LGFCKAHRIEDAIDVLDSMVGNGCRP 537



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 177/358 (49%), Gaps = 5/358 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + D +  D    +V  +  L+ A ++    + A+K   E  S GL P+ +T++ +IR 
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C +     A ++I  +   G  P+V ++ IL+ +L   G+ +E  +++ +M    C PN
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY+ L+  LC  G++EEA  +L  +K  GL PD Y+Y  ++  FC+ GR + A+E L 
Sbjct: 329 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 388

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             I  G  P++V +NT+    CK G   + + +   + +  C P+  SY+T+ + L   G
Sbjct: 389 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
               A+ +  EMV  G + DE   NS++  LC      + +++ A+++   M        
Sbjct: 449 DKIRALHMILEMVSNGIDPDEITYNSMISCLC-----REGMVDKAFELLVDMRSCEFHPS 503

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
             TY IV+    K  + ++A+  L   +  G  P   T+  +I+ +   G   +A+ L
Sbjct: 504 VVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 561



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 169/356 (47%), Gaps = 13/356 (3%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D +   G    +  +N ++  +      + A +        G  P+  +++I
Sbjct: 240 VDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNI 299

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++R   N+  + E  K++  MF     PNV T++IL+ +LC+ G+++EA+ +L  M   G
Sbjct: 300 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 359

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  +Y+ L+   C  GR++ A E L  + +DG  PD+  Y  V+   CK G++++A+
Sbjct: 360 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 419

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+  +  E G +PN  ++NT+F+     G  ++ + ++  M      PD+I+Y+++++ L
Sbjct: 420 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCL 479

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G +  A  +  +M    F       N +L G C     +   +EDA  V + M    
Sbjct: 480 CREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFC-----KAHRIEDAIDVLDSMVGNG 534

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP--------RTITFNNVIQ 413
              +  TY ++I  +G      EA+   +  + +  I         RT    NV+Q
Sbjct: 535 CRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISEYSFKRLHRTFPLLNVLQ 590



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 165/354 (46%), Gaps = 39/354 (11%)

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVT---------------------------------- 156
           C   ++ E+  +++ M   GY+P+V                                   
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVF 155

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
            +  L+N  CK  R+ +A  VLD+M      P+  TYN ++  LC  G+++ A ++L  +
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            +D  +P V TYT +++     G  +EA++LL+E + RG+ P++ T+NT+  G CKEG  
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            +   +++ ++ + C PD ISY+ LL  LL  GK      +  +M     + +    + L
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +  LC         +E+A  + + M +K    D  +Y  +I    +  + D A+  L   
Sbjct: 336 ITTLCRDGK-----IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           I  G +P  + +N V+  LC  GK D+AL +   + E    P+ +SY+ + + L
Sbjct: 391 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 444



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 140/314 (44%), Gaps = 41/314 (13%)

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           C+SG   E+L +L+ M R G  P++     L+KG   +  V +A  ++  ++  G +PDV
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           + Y A+++GFCK+ R ++A  +L+    +  +P+ VT+N +    C  G     + +L  
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           +   NC P  I+Y+ L+   +  G +  A+ +  EM+  G + D                
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPD---------------- 258

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                      +F             TY  +IR + K    D A   + +    G  P  
Sbjct: 259 -----------MF-------------TYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDV 294

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           I++N +++AL  +GK ++   L+  M+     P+  +Y +LIT L +  K  +A  L   
Sbjct: 295 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 354

Query: 466 ALKQGVIPQRKPQD 479
             ++G+ P     D
Sbjct: 355 MKEKGLTPDAYSYD 368



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 6/182 (3%)

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +F+  C+ G  ++ + LL+ M ++   PD I  + L+ G      +  AV + + + +FG
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            + D    N+L+ G C     + + ++DA +V ++M  K    D  TY I+I +L    K
Sbjct: 151 -QPDVFAYNALINGFC-----KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 204

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D AL  L   +     P  IT+  +I+A   EG +D+AL LL  M      P   +Y+ 
Sbjct: 205 LDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNT 264

Query: 446 LI 447
           +I
Sbjct: 265 II 266


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 201/442 (45%), Gaps = 48/442 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N  L A V  +    AV  ++  +  G   + P   T++I+I 
Sbjct: 42  VFDELLRRGRGASIYGLNRAL-ADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIG 100

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
           C C           +  +   G+  +  TFT L+  LC   R  +A++ VL +M  +GC 
Sbjct: 101 CCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 160

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---------------------------- 219
           P++ +YN LLKGLC   R +EA E+L  + +D                            
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKA 220

Query: 220 ----------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
                     G+ PDV TY++++   CK    ++AME+LN  ++ GV P+ +T+N++ +G
Sbjct: 221 YSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 280

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YC  G P + +G LK M+     P+ ++YS+L+N L K G+   A  IF  M + G E D
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                +LL+G     +  K  L + + + + M +     D   + I+I    K +K D+A
Sbjct: 341 IATYRTLLQG-----YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           ++      + G  P  + +  VI  LC  G +D A+L    M +    P+   Y  LI  
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455

Query: 450 LDQLEKSYDACALYGAALKQGV 471
           L   +K   A  L    L +G+
Sbjct: 456 LCTCDKWDKAEELILEMLDRGI 477



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 198/408 (48%), Gaps = 7/408 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     ++ DG   +V  ++ L+  L        A K F   +  GL P+  T+  +
Sbjct: 288 KEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTL 347

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG  P+   F IL+ +  K  ++ +A+ V  +M + G 
Sbjct: 348 LQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 407

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN+  Y  ++  LC  G V++A      + ++GL P++  YT+++ G C   + ++A E
Sbjct: 408 NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEE 467

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E ++RG+  N + FN++ + +CKEG  ++   L  LM +    PD I+Y+TL++G  
Sbjct: 468 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCC 527

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A  +   MV  G + D     +L+ G C  S      ++DA  +F++M     
Sbjct: 528 LAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR-----MDDALALFKEMVSSGV 582

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             +  TY I+++ L   ++T  A        + G      T+N ++  LC     D+AL 
Sbjct: 583 SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALR 642

Query: 427 LLF-LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   L     ++ +RT ++++I  L +  +  +A  L+ A    G++P
Sbjct: 643 MFQNLCLTDLQLETRT-FNIMIGALLKCGRMDEAKDLFAAHSANGLVP 689



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 210/430 (48%), Gaps = 19/430 (4%)

Query: 58  VDRIKASPL-------KERIDIFDSIKKDGTNWS----VSDFNDLLMALVMLNEQETAVK 106
           VD I  +PL       K   D  D + +  T       V  +N+LL  L   N  + A++
Sbjct: 125 VDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALE 184

Query: 107 FF---SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
                ++    G  P+  +++ ++  +  + D  +A      M D G  P+V T++ ++ 
Sbjct: 185 LLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIA 244

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK+  + +A+EVL+ M + G  P+  TYN +L G C  G+ +EA   L  +++DG++P
Sbjct: 245 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEP 304

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V TY+++M+  CK GRS EA ++ +   +RG+ P++ T+ TL  GY  +G  ++   LL
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 364

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            LM +    PD   ++ L+    K  K+  A+ +F +M + G   +     +++  LC K
Sbjct: 365 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC-K 423

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           S      ++DA   FE+M  +    +   Y  +I  L    K D+A   +   ++ G   
Sbjct: 424 SGS----VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL 479

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            TI FN++I + C EG++ ++  L  LM      P   +Y+ LI       K  +A  L 
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 539

Query: 464 GAALKQGVIP 473
            + +  GV P
Sbjct: 540 ASMVSVGVKP 549



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 196/390 (50%), Gaps = 20/390 (5%)

Query: 67  KERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           +E++D    +F  +++ G N +V  +  ++  L      + A+ +F +    GL PN   
Sbjct: 389 QEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIV 448

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I   C  + + +A ++I  M D G   N   F  +++S CK GR+ E+ ++ D M 
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 508

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           RIG KP+I TYN L+ G C  G+++EA ++L ++ + G+KPD+ TY  +++G+C+V R +
Sbjct: 509 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 568

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +A+ L  E +  GV+PN++T+N +  G            L   + K     +  +Y+ +L
Sbjct: 569 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 628

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL--CMKSWEEKDLLEDAYQVFEK 360
           +GL K      A+ +F+ +     +++ R  N ++  L  C +  E KDL       F  
Sbjct: 629 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL-------FAA 681

Query: 361 MTKKVSVTDPGTYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            +    V D  TY ++   L   G  ++ D+  + +    E G    +   N++++ L  
Sbjct: 682 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME---ENGCSADSRMLNSIVRKLLQ 738

Query: 418 EGKIDKALLLLFLMYE-HAKIPSRTSYDML 446
            G I +A   LF++ E H  + + T+  +L
Sbjct: 739 RGDITRAGTYLFMIDEKHFSLEASTASFLL 768



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 185/389 (47%), Gaps = 9/389 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   + D + ++G       FN L+ A     + + A+  FS+   +GL PN   +  
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A    + M D G  PN+  +T L++ LC   +  +A E++ +M   G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              N   +N ++   C  GRV E+ ++   +   G+KPD+ TY  ++DG C  G+ +EA 
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +LL   +  GV P++VT+ TL NGYC+       + L K M      P+ I+Y+ +L GL
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
               +   A  ++  + + G +++    N +L GLC     + +L ++A ++F+ +    
Sbjct: 597 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC-----KNNLTDEALRMFQNLCLTD 651

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEA--LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
              +  T+ I+I  L K  + DEA  L   H A   G +P   T++ + + L  +G +++
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA--NGLVPDVRTYSLMAENLIEQGSLEE 709

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
              L   M E+         + ++ KL Q
Sbjct: 710 LDDLFLSMEENGCSADSRMLNSIVRKLLQ 738



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 170/360 (47%), Gaps = 44/360 (12%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P V T+ IL+   C++GRL      L  + + G + +  T+  LLKGLC   R  +A ++
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 213 LMNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAMELLN-EAIER--GVTPNVVTFNTLFN 268
           ++    + G  PDV++Y  ++ G C   RS EA+ELL+  A +R  G  P+VV++NT+ N
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G+ KEG   K       M  R  LPD ++YS+++  L K   +  A+ +   MV+ G   
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 329 DERMMNSLLRGLCMKSWEEKDLL-------------------------------EDAYQV 357
           D    NS+L G C  S + K+ +                                +A ++
Sbjct: 270 DCMTYNSILHGYC-SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 328

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQ 413
           F+ MTK+    D  TY    RTL +G  T  AL+ +H  +++    G  P    FN +I 
Sbjct: 329 FDSMTKRGLEPDIATY----RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A   + K+D+A+L+   M +H   P+   Y  +I  L +     DA   +   + +G+ P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/345 (22%), Positives = 157/345 (45%), Gaps = 15/345 (4%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP  +     +D + K+  + + +  F+ +  +G   ++  +  L+  L   ++ + A +
Sbjct: 408 NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEE 467

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
              E    G+  N+  F+ +I  +C +    E+ K+ D M   G  P++ T+  L++  C
Sbjct: 468 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCC 527

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
            +G++ EA ++L  M  +G KP+I TY  L+ G C V R+++A  +   + + G+ P++ 
Sbjct: 528 LAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNII 587

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY  ++ G     R+  A EL     + G    + T+N + +G CK     + + + + +
Sbjct: 588 TYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK--- 343
              +   +  +++ ++  LLK G++  A  +F      G   D R  + +   L  +   
Sbjct: 648 CLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSL 707

Query: 344 --------SWEEKDLLEDAY---QVFEKMTKKVSVTDPGTYGIVI 377
                   S EE     D+     +  K+ ++  +T  GTY  +I
Sbjct: 708 EELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMI 752



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 150/345 (43%), Gaps = 17/345 (4%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV--LDQMGRIGC---KPNIQT 192
           +AR V D +   G   ++     L  +L    R   A  V   ++M R G     P + T
Sbjct: 38  DARHVFDELLRRGRGASIYG---LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHT 94

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEA 251
           Y  L+   C  GR++  +  L NV   G + D  T+T ++ G C   R+++AM++ L   
Sbjct: 95  YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM---KKRNCLPDKISYSTLLNGLLKW 308
            E G  P+V ++N L  G C E    + + LL +M   +     PD +SY+T+LNG  K 
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G    A S + EM+  G   D    +S++  LC     +   ++ A +V   M K   + 
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALC-----KAQAMDKAMEVLNTMVKNGVMP 269

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  TY  ++       +  EA+  L      G  P  +T+++++  LC  G+  +A  + 
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M +    P   +Y  L+          +  AL    ++ G+ P
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP 374


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 191/386 (49%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN++L +LV +    TA+         G+  +  T +I+I C+C+      +  V+  + 
Sbjct: 72  FNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATIL 131

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             GYHP+V T T L+  LC  G +K+AL+  D +  +  + +  +Y  L+ GLC +G  +
Sbjct: 132 KRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETK 191

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A +++ N++   +KPDV  Y  ++D  CK     EA  L +E   + + PNVVT+ TL 
Sbjct: 192 AAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLI 251

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G+C  G  ++ V LL  MK +N  PD  ++S L++ L K GK++ A  +   M++   +
Sbjct: 252 YGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVK 311

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    NSL+ G  + +      ++ A  VF  M +        +Y I+I  L K K  D
Sbjct: 312 PDVVTYNSLVDGYFLVNE-----VKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA+           IP TITFN++I  LC  G+I     L+  M + +++    +Y  LI
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLI 426

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L +      A AL+   + Q + P
Sbjct: 427 DALCKNCHLDQAIALFKKMITQEIQP 452



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 172/325 (52%), Gaps = 5/325 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   +SE ++  + PN  T++ +I  +C      EA  +++ M     +P+V TF+IL++
Sbjct: 228 ACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILID 287

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +L K G++K A  VL  M +   KP++ TYN L+ G   V  V+ A  +  ++   G+ P
Sbjct: 288 ALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTP 347

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            V +YT ++DG CK    +EA+ L  E   + V PN +TFN+L +G CK G       L+
Sbjct: 348 GVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLV 407

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M+ R+ L D I+YS+L++ L K   +  A+++FK+M+    + D      L+ GLC  
Sbjct: 408 DKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLC-- 465

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   L+ A +VF+ +  K    D  TY ++I    K    DEAL  L    + G IP
Sbjct: 466 ---KGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIP 522

Query: 404 RTITFNNVIQALCGEGKIDKALLLL 428
             ITF+ +I AL  + + DKA  LL
Sbjct: 523 NAITFDIIICALFEKDENDKAEKLL 547



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 198/436 (45%), Gaps = 40/436 (9%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +  +I K G +  V     L+  L +  E + A+KF  +  +     +  ++  +I   C
Sbjct: 126 VLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLC 185

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +   A +++  + +    P+V  + I+++SLCK+  + EA  +  +M      PN+ 
Sbjct: 186 KIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVV 245

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+ G C +G + EA  +L  +K   + PDVYT++ ++D   K G+   A  +L   
Sbjct: 246 TYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVM 305

Query: 252 IERGVTPNVVTFNTLFNGY-----------------------------------CKEGTP 276
           ++  V P+VVT+N+L +GY                                   CK    
Sbjct: 306 MKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMV 365

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            + + L + MK +N +P+ I++++L++GL K G+I     +  +M       D    +SL
Sbjct: 366 DEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSL 425

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +  LC         L+ A  +F+KM  +    D  TY I+I  L KG +   A     H 
Sbjct: 426 IDALCKNCH-----LDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHL 480

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           +  G+     T+  +I   C  G  D+AL LL  M ++  IP+  ++D++I  L + +++
Sbjct: 481 LIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDEN 540

Query: 457 YDACALYGAALKQGVI 472
             A  L    + +G++
Sbjct: 541 DKAEKLLREMIARGLL 556



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 156/344 (45%), Gaps = 5/344 (1%)

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           Y N ND  +A  + + M      P    F  +++SL K  R   A+ +   +   G   +
Sbjct: 44  YNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSD 103

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + T N L+   C++G++  ++ +L  +   G  PDV T T ++ G C  G   +A++  +
Sbjct: 104 LVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHD 163

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           + +      + +++ TL NG CK G     + L++ +++R+  PD + Y+ +++ L K  
Sbjct: 164 DVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNK 223

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +  A +++ EM       +     +L+ G C+        L +A  +  +M  K    D
Sbjct: 224 LVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGC-----LIEAVALLNEMKLKNINPD 278

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             T+ I+I  LGK  K   A I L   ++    P  +T+N+++       ++  A  +  
Sbjct: 279 VYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFN 338

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M +    P   SY ++I  L + +   +A +L+     + VIP
Sbjct: 339 SMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIP 382



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 1/153 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D + K+  +    D+ D ++       V  ++ L+ AL      + A+  
Sbjct: 382 PNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIAL 441

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F +  +  + P+ +T++I+I   C       A++V   +   GYH ++ T+T++++  CK
Sbjct: 442 FKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCK 501

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           +G   EAL +L +M   GC PN  T++ ++  L
Sbjct: 502 AGLFDEALALLSKMEDNGCIPNAITFDIIICAL 534


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 209/408 (51%), Gaps = 8/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E ID+F  + +     S+ DF+ +L  +      +  +  F      G+  + ++++I
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I C C  + F  A  V+  M   GY P+V T + L+N  C+  R+ +A++++ +M  +G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +P++  YN ++ G C +G V +A E+   ++ DG++ D  TY +++ G C  GR ++A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L+ + + R + PNV+TF  + + + KEG   + + L + M +R   PD  +Y++L+NGL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G++  A  +   MV  G   D    N+L+ G C     +   +++  ++F +M ++ 
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC-----KSKRVDEGTKLFREMAQRG 344

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            V D  TY  +I+   +  + D A         M   P   T++ ++  LC   +++KAL
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSR---MDSRPNIRTYSILLYGLCMNWRVEKAL 401

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +L   M +       T+Y+++I  + ++    DA  L+ +   +G+ P
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 4/296 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + +++FD +++DG       +N L+  L        A +   +     + PN  
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +  +  F EA K+ + M      P+V T+  L+N LC  GR+ EA ++LD M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P++ TYN L+ G C   RV+E  ++   +   GL  D  TY  ++ G+ + GR 
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A E+ +    R   PN+ T++ L  G C      K + L + M+K     D  +Y+ +
Sbjct: 366 DAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKDLLEDAYQ 356
           ++G+ K G +  A  +F+ +   G + D     +++ G C K  W++ DLL    Q
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 146/306 (47%), Gaps = 7/306 (2%)

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           S  L+E +++  +M +    P+I  ++ +L  +      +    +  +++  G+  D+Y+
Sbjct: 47  SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  V++  C+  R   A+ ++ + ++ G  P+VVT ++L NG+C+       + L+  M+
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WE 346
           +    PD + Y+T+++G  K G +  AV +F  M R G   D    NSL+ GLC    W 
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW- 225

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
                 DA ++   M  +  V +  T+  VI    K  K  EA+            P   
Sbjct: 226 -----SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           T+N++I  LC  G++D+A  +L LM     +P   +Y+ LI    + ++  +   L+   
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340

Query: 467 LKQGVI 472
            ++G++
Sbjct: 341 AQRGLV 346



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 114/233 (48%), Gaps = 3/233 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K     E + +++ + +   +  V  +N L+  L M    + A +      + G  P+ 
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I  +C      E  K+   M   G   +  T+  ++    ++GR   A E+  +
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M     +PNI+TY+ LL GLC   RVE+A  +  N++   ++ D+ TY  V+ G CK+G 
Sbjct: 375 MDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             +A +L      +G+ P+VV++ T+ +G+C++    K   L + M++   LP
Sbjct: 432 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484


>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
 gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
          Length = 321

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 163/301 (54%), Gaps = 5/301 (1%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M + G  P V TF ILV+ LCK+ RL +A E+++ MG  GC PN   +N ++  LC  GR
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
             EAY  +  +++ G+ P + TY  ++DGFCK  + + A+E+L E   RG  PN VT+NT
Sbjct: 61  SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
             +G CK G     + L + M ++    D   Y+TL++GL + GK+  A S+  EM   G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   N++L  LC  S      + +A+++F++MT    + D  T+G+++    +G +
Sbjct: 181 CVPKPGCYNAILSWLCKGSR-----INEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHR 235

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+AL+ L      G  PR + +N +I AL   G++ +A  LL  M      P+  +Y +
Sbjct: 236 IDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYAL 295

Query: 446 L 446
           +
Sbjct: 296 M 296



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 148/296 (50%), Gaps = 5/296 (1%)

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC P + T+  L+ GLC   R+ +A+E++  +   G  P+   +  +MD  CK GR
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           S EA   +      GV+P +VT+N L +G+CKE    + + +L+ M  R   P+ ++Y+T
Sbjct: 61  SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
            L+GL K+GK+  A+++F+ M      +D     +L+ GLC     +   L +AY + ++
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLC-----QAGKLAEAYSLLDE 175

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M     V  PG Y  ++  L KG + +EA          G +P  +TF  ++   C   +
Sbjct: 176 MENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHR 235

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           ID ALLLL  M      P    Y+ LI  L++  +  +A  L    + +G+ P  +
Sbjct: 236 IDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSR 291



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 133/270 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA+ L +  ++ + + + G   +   FN ++ AL        A  F     S G++P   
Sbjct: 22  KANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETMRSMGVSPTIV 81

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I  +C +     A +++  M   G+ PN  T+   ++ LCK G++ +AL +   M
Sbjct: 82  TYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAM 141

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                + ++  Y  L+ GLC  G++ EAY +L  ++N G  P    Y A++   CK  R 
Sbjct: 142 TEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRI 201

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           NEA +L       G+ P+ +TF  +  GYC+       + LL+ MK     P ++ Y+TL
Sbjct: 202 NEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTL 261

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           ++ L + G++  A  + +EM+  G   + R
Sbjct: 262 IDALNRAGRVSEAYRLLQEMISRGLSPNSR 291



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 144/306 (47%), Gaps = 10/306 (3%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  F  L+  L   N    A +        G  PN+  F+ ++   C +    EA   I
Sbjct: 9   TVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFI 68

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           + M   G  P + T+ +L++  CK  +L  ALE+L +M   G +PN  TYN  L GLC  
Sbjct: 69  ETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKY 128

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G+V++A  +   +    ++ DVY YT ++DG C+ G+  EA  LL+E    G  P    +
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCY 188

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N + +  CK     +   L K M     LPD +++  ++ G  +  +I  A+ + ++M  
Sbjct: 189 NAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKS 248

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G    E + N+L+  L          + +AY++ ++M  +    +  TY ++     + 
Sbjct: 249 AGLAPREVIYNTLIDAL-----NRAGRVSEAYRLLQEMISRGLSPNSRTYALM-----RK 298

Query: 384 KKTDEA 389
           ++TD++
Sbjct: 299 QQTDDS 304



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 63/137 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L E   + D ++  G       +N +L  L   +    A K F   +  G+ P+  
Sbjct: 162 QAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWL 221

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF +M+  YC  +   +A  ++  M   G  P    +  L+++L ++GR+ EA  +L +M
Sbjct: 222 TFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEM 281

Query: 182 GRIGCKPNIQTYNCLLK 198
              G  PN +TY  + K
Sbjct: 282 ISRGLSPNSRTYALMRK 298


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 202/412 (49%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+  + +   ++K G   ++   N  +  LVM N  E A++F       G+ PN  
Sbjct: 130 RAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVV 189

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+ YC+ +   +A ++I  M   G  P+  ++  ++  LCK+ R++E ++V+++M
Sbjct: 190 TYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKM 249

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                  +  TYN L+  LC     +EA + L   +  G + D   Y+A++D +CK GR 
Sbjct: 250 EDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRM 309

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A E++NE   RG  P+VVT+  + NG+ + G   +   +L+ M K  C P+ +SY+  
Sbjct: 310 DQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAF 369

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L GL + G    A    +EM++   E      N++   + M  +  +  L DA  V  +M
Sbjct: 370 LKGLCQKGNSSEA----REMMK-ASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREM 424

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K     P    +++++L +  + DEA   +   + MG     + F  VI   C +  I
Sbjct: 425 IGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDI 484

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + AL LL  MY   K P   +Y  +I  L +  +  +A  L    LK+G+ P
Sbjct: 485 EAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDP 536



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 159/324 (49%), Gaps = 5/324 (1%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G       F  ++ S  ++G+L+ A++VL  M + G +PN+   N  +  L     +E+A
Sbjct: 113 GIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKA 172

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
              L  ++  G+ P+V TY  ++ G+C + R  +AMEL++E   +G +P+ V++ T+   
Sbjct: 173 LRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGF 232

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            CK     + + +++ M+    L D+++Y+TL++ L K      A+   +E  + GF+VD
Sbjct: 233 LCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVD 292

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
           +   ++++   C     ++  ++ A ++  +M  +  + D  TY  +I    +  +  +A
Sbjct: 293 KVGYSAIVDSYC-----KEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQA 347

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
              L    + G  P T+++   ++ LC +G   +A  ++    E    P+  +Y +++  
Sbjct: 348 RKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHG 407

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
             +  K  DAC +    + +G  P
Sbjct: 408 FRREGKLSDACDVVREMIGKGFFP 431



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 144/323 (44%), Gaps = 5/323 (1%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           Y  +   + ++++ L K+   + A  VL  M R G +   Q + C++      G++  A 
Sbjct: 79  YRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAM 138

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           ++L  ++  G++P++      +          +A+  L      G+ PNVVT+N L  GY
Sbjct: 139 QVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGY 198

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C        + L+  M  + C PDK+SY T++  L K  +IR  + + ++M       D+
Sbjct: 199 CDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQ 258

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N+L+  LC     +    ++A Q   +  K+    D   Y  ++ +  K  + D+A 
Sbjct: 259 VTYNTLIHMLC-----KHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAK 313

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             ++     G IP  +T+  +I      G++ +A  +L  MY+H   P+  SY   +  L
Sbjct: 314 EIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGL 373

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            Q   S +A  +  A+ +Q   P
Sbjct: 374 CQKGNSSEAREMMKASEEQWWTP 396



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 154/342 (45%), Gaps = 9/342 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + +   +   + K G   +   +   L  L        A +    +      PN+ 
Sbjct: 340 QAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAI 399

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S+++  +  +    +A  V+  M   G+ P      +L+ SLC+ GR+ EA + +++ 
Sbjct: 400 TYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEEC 459

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +GC  N   +  ++   C    +E A  +L ++      PD  TYT ++D   K GR 
Sbjct: 460 LNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRI 519

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYST 300
            EA EL  + +++G+ P  VT+ T+ + Y + G     + LL K++ ++ C   + +++ 
Sbjct: 520 EEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQEC---RTAFNQ 576

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++  L  +G +  A  +  +++R    +D    + L     M+S+  K +   AY+V  +
Sbjct: 577 VIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVL-----MESYLRKGIPLSAYKVACR 631

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
           M  +  + D      V + L +  K++EA       +E G+I
Sbjct: 632 MFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERGNI 673


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 183/377 (48%), Gaps = 5/377 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FD +++ G       +  L+  L    E + A K   E  +  L  +  T+++++  YC 
Sbjct: 387 FDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCK 446

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           +    EA +V + M   G  PNV T+T L + LCK G ++ A E+L +M   G + N  T
Sbjct: 447 RGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACT 506

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN L+ GLC  G +++A   + ++   GLKPDVYTYT ++D  CK G  + A +LL E +
Sbjct: 507 YNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEML 566

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           + G+ P +VT+N L NG+C  G    G  LL+ M ++N  P+  +Y++L+        ++
Sbjct: 567 DNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMK 626

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
               I+K M     E +E   N L++G C    + + + E  Y   E + K   +T   +
Sbjct: 627 STTEIYKGMCSRNVEPNENTYNILIKGHC----KARSMKEAQYFHNEMIEKGFRLT-ASS 681

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y  +IR L K KK  EA    H   + G       +N  I     E  ++  L L   + 
Sbjct: 682 YSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELV 741

Query: 433 EHAKIPSRTSYDMLITK 449
           E + + S+   D  + K
Sbjct: 742 EASIVKSKAEMDQDVVK 758



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 182/385 (47%), Gaps = 12/385 (3%)

Query: 65  PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           PL E I++F  +     + +V  +N LL  L      E A + F E +S    P+  T+ 
Sbjct: 246 PLDEAIELFQGLP----DKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYG 298

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           I+I  YC   +   A K++D M   G  PN T +T +V  LC  GR+ +AL V++ M   
Sbjct: 299 ILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHH 358

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
               +   Y  +L G C  G +  A      ++  GL  D  TYT +++G C+ G   EA
Sbjct: 359 KVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEA 418

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            ++L E + R +  + VT+  L +GYCK G   +   +   M +R   P+ ++Y+ L +G
Sbjct: 419 EKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDG 478

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K G ++ A  +  EM   G E++    NSL+ GLC   +     L+ A +    M   
Sbjct: 479 LCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY-----LDQAMRTMADMDAA 533

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY  +I  L K  + D A   L   ++ G  P  +T+N ++   C  G+++  
Sbjct: 534 GLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGG 593

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITK 449
             LL  M E    P+ T+Y+ L+ +
Sbjct: 594 KKLLEWMLEKNIHPNATTYNSLMKQ 618



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 162/323 (50%), Gaps = 14/323 (4%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           NV ++ IL+  LC +GR+++A ++ D+M      P++ TY  L+ G C +G +E A ++L
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLL 317

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
            ++   G++P+   YT+V+   C  GR ++A+ ++ + +   V  +   + T+ +G+C +
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G  +        M+++    D ++Y+TL+NGL + G+++ A  + +EM+    +VDE   
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
             L+ G C     ++  + +A+QV   M ++    +  TY  +   L K      A   L
Sbjct: 438 TVLVDGYC-----KRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELL 492

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL--- 450
           H     G      T+N++I  LC  G +D+A+  +  M      P   +Y  LI  L   
Sbjct: 493 HEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +L++++D   L    L  G+ P
Sbjct: 553 GELDRAHD---LLQEMLDNGIKP 572



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 135/295 (45%), Gaps = 3/295 (1%)

Query: 40  AESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           A  LD+ E   ++    +  R K   + E   + +++ + G   +V  +  L   L    
Sbjct: 427 ARRLDVDEVTYTVLVDGYCKRGK---MAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQG 483

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           + + A +   E S+ GL  N+ T++ +I   C      +A + +  M   G  P+V T+T
Sbjct: 484 DVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYT 543

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L+++LCKSG L  A ++L +M   G KP I TYN L+ G C  GRVE   ++L  +   
Sbjct: 544 TLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEK 603

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            + P+  TY ++M  +C         E+      R V PN  T+N L  G+CK  +  + 
Sbjct: 604 NIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEA 663

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
                 M ++       SYS L+  L K  K   A  +F +M + GF  +  + N
Sbjct: 664 QYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYN 718



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 2/169 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  L    D+   +  +G   ++  +N L+    M    E   K         + PN+ 
Sbjct: 551 KSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNAT 610

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +++ YC  N+     ++   M      PN  T+ IL+   CK+  +KEA    ++M
Sbjct: 611 TYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEM 670

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL--KPDVYTY 228
              G +    +Y+ L++ L    +  EA ++  +++ +G   +PDVY +
Sbjct: 671 IEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 192/389 (49%), Gaps = 10/389 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  + K     +V  FN ++  L  + +   A     +   +G++PN  T++ +I  YC
Sbjct: 142 VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201

Query: 132 NKN---DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
                   ++A  ++  M   G  PN  T+ IL++  CK   +  A+ V  +M R G +P
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP 261

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N+ TYN L+ GLC  G+V+EA  +   + +  L+P+V T+  +++GFCK    NEA+ L 
Sbjct: 262 NVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLF 321

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           N+  ++GV PN +T+ TL + YCK+G       L  +M  R   P+  +Y+ L+ GL + 
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G ++ A S+  EMV      D    N L+  LC K    K     A ++ ++M +K    
Sbjct: 382 GDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRK-----AVKLLDEMFEKGLNP 436

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
              TY  ++    +      ALI        G     +T N +I+  C +G+++ A  LL
Sbjct: 437 SHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLL 496

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             M E   +P+RT+Y+  I K + +EK +
Sbjct: 497 NEMLERGLVPNRTTYE--IIKEEMMEKGF 523



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 206/444 (46%), Gaps = 45/444 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF--FSEASSYGLAPNSWTFSIMIRC 129
           IF +I   G ++ V+     ++ L  +   +    F  F  A  YG   +  + + ++  
Sbjct: 70  IFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSG 129

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
              +++  +   V   M       NV +F I+VN LCK G+L  A +V++ M   G  PN
Sbjct: 130 LVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPN 189

Query: 190 IQTYNCLLKGLCYVGRV---------------------EEAYEMLMN------------- 215
           + TYN L+ G C +GR+                     E  Y +L++             
Sbjct: 190 VITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMR 249

Query: 216 ----VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
               ++  GL+P+V TY  +++G C  G+ +EA+ L ++ +   + PNVVT N L NG+C
Sbjct: 250 VFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFC 309

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           K  T  + + L   M+K+   P+ ++Y+TL++   K G++  A +++  M+  G   +  
Sbjct: 310 KNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVS 369

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             N L+ GLC K       ++ A  +  +M  K    D  TY I+I +L K  ++ +A+ 
Sbjct: 370 TYNCLIAGLCRKGD-----VKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVK 424

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            L    E G  P  +T+N ++   C EG +  AL++   M    K  +  ++++LI    
Sbjct: 425 LLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFC 484

Query: 452 QLEKSYDACALYGAALKQGVIPQR 475
              +  DA  L    L++G++P R
Sbjct: 485 LKGRLEDANGLLNEMLERGLVPNR 508


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 163/305 (53%), Gaps = 5/305 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +  ++     + +   A K F E    GL P+S TF+ +I  YC      +A +V +
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G  PNV T+T L++ LCK G L  A E+L +M +IG +PNI TYN ++ GLC  G
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            +EEA +++   +  GL  D  TYT +MD +CK G  ++A E+L E + +G+ P +VTFN
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L NG+C  G    G  LL  M  +   P+  ++++L+        ++ A +I+K+M   
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D +   +L++G C     +   +++A+ +F++M  K       TY ++I+   K K
Sbjct: 626 GVGPDGKTYENLVKGHC-----KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680

Query: 385 KTDEA 389
           K  EA
Sbjct: 681 KFLEA 685



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 189/407 (46%), Gaps = 5/407 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +F    + G  W+V+ +N ++  +  L   + A          G  P+  ++S ++  
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC   +  +  K+I+ M   G  PN   +  ++  LC+  +L EA E   +M R G  P+
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
              Y  L+ G C  G +  A +    + +  + PDV TYTA++ GFC++G   EA +L +
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E   +G+ P+ VTF  L NGYCK G       +   M +  C P+ ++Y+TL++GL K G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +  A  +  EM + G + +    NS++ GLC     +   +E+A ++  +        D
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLC-----KSGNIEEAVKLVGEFEAAGLNAD 525

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  ++    K  + D+A   L   +  G  P  +TFN ++   C  G ++    LL 
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            M      P+ T+++ L+ +         A A+Y     +GV P  K
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 193/409 (47%), Gaps = 6/409 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVM-LNEQETAVKFFSEASSYGLAPNSWTFS 124
           L+E   +F+ +   G   SV   N  L  L     +  TA+  F E    G+  N  +++
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           I+I   C      EA  ++  M   GY P+V +++ +VN  C+ G L +  ++++ M R 
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G KPN   Y  ++  LC + ++ EA E    +   G+ PD   YT ++DGFCK G    A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            +   E   R +TP+V+T+  + +G+C+ G  ++   L   M  +   PD ++++ L+NG
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             K G ++ A  +   M++ G   +     +L+ GLC    +E D L+ A ++  +M K 
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC----KEGD-LDSANELLHEMWKI 485

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               +  TY  ++  L K    +EA+  +      G    T+T+  ++ A C  G++DKA
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +L  M      P+  ++++L+          D   L    L +G+ P
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 133/273 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +K+   + + + + G + +V  +  L+  L    + ++A +   E    GL PN +
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C   +  EA K++      G + +  T+T L+++ CKSG + +A E+L +M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P I T+N L+ G C  G +E+  ++L  +   G+ P+  T+ +++  +C     
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A  +  +   RGV P+  T+  L  G+CK     +   L + MK +       +YS L
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
           + G LK  K   A  +F +M R G   D+ + +
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 89/192 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  + +  +I   +   G   ++  FN L+    +    E   K  +   + G+APN+ 
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +++ YC +N+   A  +   M   G  P+  T+  LV   CK+  +KEA  +  +M
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   ++ TY+ L+KG     +  EA E+   ++ +GL  D   +    D   K  R 
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRP 717

Query: 242 NEAMELLNEAIE 253
           +  ++ ++E IE
Sbjct: 718 DTIVDPIDEIIE 729


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 205/415 (49%), Gaps = 8/415 (1%)

Query: 37  LSTAESLDLKENPRSLQ-AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMAL 95
           L   E+L LK N  +     R + R  A  + E  +I   +  +G    V  +  L+ AL
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGR--AGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303

Query: 96  VMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV 155
               + + A + F +  +    P+  T+  ++  + +  D    ++    M  +G+ P+V
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
            TFTILV++LCK+G   EA + LD M   G  PN+ TYN L+ GL  V R+++A E+  N
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +++ G+KP  YTY   +D + K G S  A+E   +   +G+ PN+V  N       K G 
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   +   +K    +PD ++Y+ ++    K G+I  A+ +  EM+  G E D  ++NS
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+  L      + D +++A+++F +M +        TY  ++  LGK  K  EA+     
Sbjct: 544 LINTL-----YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            ++ G  P TITFN +   LC   ++  AL +LF M +   +P   +Y+ +I  L
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 147/305 (48%), Gaps = 7/305 (2%)

Query: 71   DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
            D+F  +K  G    V+ +N LL A     + +   + + E S++    N+ T +I+I   
Sbjct: 806  DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL 865

Query: 131  CNKNDFFEARKVI-DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
                +  +A  +  D M D  + P   T+  L++ L KSGRL EA ++ + M   GC+PN
Sbjct: 866  VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925

Query: 190  IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
               YN L+ G    G  + A  +   +  +G++PD+ TY+ ++D  C VGR +E +    
Sbjct: 926  CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985

Query: 250  EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK-KRNCLPDKISYSTLLNGLLKW 308
            E  E G+ P+VV +N + NG  K     + + L   MK  R   PD  +Y++L+  L   
Sbjct: 986  ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA 1045

Query: 309  GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
            G +  A  I+ E+ R G E +    N+L+RG  +    E      AY V++ M       
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH-----AYAVYQTMVTGGFSP 1100

Query: 369  DPGTY 373
            + GTY
Sbjct: 1101 NTGTY 1105



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 184/417 (44%), Gaps = 30/417 (7%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L+       A++ +      G  P+  T+S ++     + D      ++  M 
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PNV TFTI +  L ++G++ EA E+L +M   GC P++ TY  L+  LC   +++
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A E+   +K    KPD  TY  ++D F      +   +  +E  + G  P+VVTF  L 
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG-- 325
           +  CK G   +    L +M+ +  LP+  +Y+TL+ GLL+  ++  A+ +F  M   G  
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430

Query: 326 ----------------------FEVDERMM------NSLLRGLCMKSWEEKDLLEDAYQV 357
                                  E  E+M       N +     + S  +     +A Q+
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           F  +     V D  TY ++++   K  + DEA+  L   +E G  P  I  N++I  L  
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             ++D+A  +   M E    P+  +Y+ L+  L +  K  +A  L+   +++G  P 
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 178/365 (48%), Gaps = 7/365 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA    E  D  D ++  G   ++  +N L+  L+ ++  + A++ F    S G+ P ++
Sbjct: 375 KAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ + I  Y    D   A +  + M   G  PN+      + SL K+GR +EA ++   +
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             IG  P+  TYN ++K    VG ++EA ++L  +  +G +PDV    ++++   K  R 
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA ++     E  + P VVT+NTL  G  K G   + + L + M ++ C P+ I+++TL
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            + L K  ++  A+ +  +M+  G   D    N+++ GL +K+ + K    +A   F +M
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL-VKNGQVK----EAMCFFHQM 669

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEAL-IHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            KK+   D  T   ++  + K    ++A  I  +        P  + + ++I ++  E  
Sbjct: 670 -KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAG 728

Query: 421 IDKAL 425
           ID A+
Sbjct: 729 IDNAV 733



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 152/334 (45%), Gaps = 7/334 (2%)

Query: 115  GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
            G+ P   T++++I      +    A+ V   +   G  P+V T+  L+++  KSG++ E 
Sbjct: 780  GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839

Query: 175  LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMD 233
             E+  +M    C+ N  T+N ++ GL   G V++A ++  ++ +D    P   TY  ++D
Sbjct: 840  FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899

Query: 234  GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
            G  K GR  EA +L    ++ G  PN   +N L NG+ K G       L K M K    P
Sbjct: 900  GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959

Query: 294  DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
            D  +YS L++ L   G++   +  FKE+   G   D    N ++ GL      +   LE+
Sbjct: 960  DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL-----GKSHRLEE 1014

Query: 354  AYQVFEKMTKKVSVT-DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A  +F +M     +T D  TY  +I  LG     +EA    +     G  P   TFN +I
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074

Query: 413  QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +     GK + A  +   M      P+  +Y+ L
Sbjct: 1075 RGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 192/419 (45%), Gaps = 10/419 (2%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDF-NDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
            +KAS +++   I  +   +  +   + F  DL+ +++     + AV F     + G+  +
Sbjct: 688  VKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD 747

Query: 120  SWTFSI-MIRCYCNKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
              +  + +IR  C  N+   AR + +    D G  P + T+ +L+  L ++  ++ A +V
Sbjct: 748  GDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDV 807

Query: 178  LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
              Q+   GC P++ TYN LL      G+++E +E+   +     + +  T+  V+ G  K
Sbjct: 808  FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867

Query: 238  VGRSNEAMELLNEAI-ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
             G  ++A++L  + + +R  +P   T+  L +G  K G   +   L + M    C P+  
Sbjct: 868  AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927

Query: 297  SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
             Y+ L+NG  K G+   A ++FK MV+ G   D +  + L+  LCM        +++   
Sbjct: 928  IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR-----VDEGLH 982

Query: 357  VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH-AIEMGHIPRTITFNNVIQAL 415
             F+++ +     D   Y ++I  LGK  + +EAL+  +      G  P   T+N++I  L
Sbjct: 983  YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042

Query: 416  CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
               G +++A  +   +      P+  +++ LI       K   A A+Y   +  G  P 
Sbjct: 1043 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 190/454 (41%), Gaps = 45/454 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E I +   + ++G    V   N L+  L   +  + A K F       L P   
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++          EA ++ + M   G  PN  TF  L + LCK+  +  AL++L +M
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +GC P++ TYN ++ GL   G+V+EA      +K   + PD  T   ++ G  K    
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLI 693

Query: 242 NEAM--------------------ELLNEAIERGVTPNVVTFNT--LFNGYCKEGTPM-- 277
            +A                     +L+   +      N V+F+   + NG C++G  +  
Sbjct: 694 EDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILV 753

Query: 278 ------------KGVGLL--KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
                        G   L  K  K     P   +Y+ L+ GLL+   I  A  +F ++  
Sbjct: 754 PIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS 813

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D    N LL      ++ +   +++ ++++++M+      +  T+ IVI  L K 
Sbjct: 814 TGCIPDVATYNFLL-----DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868

Query: 384 KKTDEAL-IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
              D+AL ++     +    P   T+  +I  L   G++ +A  L   M ++   P+   
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           Y++LI    +  ++  ACAL+   +K+GV P  K
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 2/245 (0%)

Query: 61   IKASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
            +KA  + + +D++  +  D   + +   +  L+  L        A + F     YG  PN
Sbjct: 866  VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925

Query: 120  SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
               ++I+I  +    +   A  +   M   G  P++ T+++LV+ LC  GR+ E L    
Sbjct: 926  CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985

Query: 180  QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMDGFCKV 238
            ++   G  P++  YN ++ GL    R+EEA  +   +K   G+ PD+YTY +++      
Sbjct: 986  ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA 1045

Query: 239  GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
            G   EA ++ NE    G+ PNV TFN L  GY   G P     + + M      P+  +Y
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105

Query: 299  STLLN 303
              L N
Sbjct: 1106 EQLPN 1110



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 172/431 (39%), Gaps = 7/431 (1%)

Query: 45  LKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA 104
           LK   R    +R   R     +K   D   S+ +  +   +S   ++   L    + +++
Sbjct: 43  LKIGSRKKHWRRKSMRCSVVSMKSS-DFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSS 101

Query: 105 VKFF-SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
             +F S A +  L   + T + M+          E   V D M       +  T+  +  
Sbjct: 102 FSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFK 161

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           SL   G LK+A   L +M   G   N  +YN L+  L       EA E+   +  +G +P
Sbjct: 162 SLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRP 221

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            + TY+++M G  K    +  M LL E    G+ PNV TF        + G   +   +L
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           K M    C PD ++Y+ L++ L    K+  A  +F++M     + D     +LL      
Sbjct: 282 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL-----D 336

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
            + +   L+   Q + +M K   V D  T+ I++  L K     EA   L    + G +P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
              T+N +I  L    ++D AL L   M      P+  +Y + I    +   S  A   +
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456

Query: 464 GAALKQGVIPQ 474
                +G+ P 
Sbjct: 457 EKMKTKGIAPN 467


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 216/476 (45%), Gaps = 13/476 (2%)

Query: 1   MSSLVPSNSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDR 60
           +S L P+ +  F     R     P F       AA L          N   L        
Sbjct: 61  VSPLDPATALAFFECVARR----PGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCS 116

Query: 61  IKASPLKERIDIFDSIKKDGTN---WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA 117
             A  ++E +D   +I++ G      S   +N  L +L+  +  E   K +S     GL 
Sbjct: 117 GTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLL 176

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P++ T++ MI  YC K     A +    + ++G   +  T   L+   C++  L++A  +
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L  M  +GC+ N  +Y  L++GLC    V EA  ++  + +DG   +++TYT ++ G CK
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCK 296

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            GR ++A  LL+E   RGV P+V T+N + +GYCK G     +G+  LM++  C PD  +
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y++L+ GL   GK+  A  +    +  GF        +L+ G C     + + ++DA +V
Sbjct: 357 YNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYC-----KAERIDDALRV 410

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
              M       D   YG++I  L K  +  EA   L+     G  P  +T+ ++I   C 
Sbjct: 411 KSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCK 470

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            G +  AL +  LM      P+  +Y  LI  L Q +K + A AL     + G+ P
Sbjct: 471 VGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITP 526



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 201/414 (48%), Gaps = 13/414 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALV--MLNEQETAVKFFSEASSYGLAPN 119
           K+  +K+ + I   ++++G N     +N L+  L    L+E E   +  + A + G  P 
Sbjct: 331 KSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAE---ELLNGAIARGFTPT 387

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             TF+ +I  YC      +A +V   M  +    ++  + +L+N L K  RLKEA E L+
Sbjct: 388 VITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLN 447

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M   G  PN+ TY  ++ G C VG V  A E+   ++++G  P+ +TY +++ G  +  
Sbjct: 448 EMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDK 507

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           + ++AM L+ +  E G+TP V+T+ TL  G CK+        L ++M++    PD+ +Y+
Sbjct: 508 KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYN 567

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L + L K G+   A S    +VR G  + +    SL+ G     + +    + A  + E
Sbjct: 568 VLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDG-----FSKAGNTDFAAVLIE 619

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           KM  +    D  TY ++++ L K KK +EAL  L      G     + +  +I  +  EG
Sbjct: 620 KMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEG 679

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           K D A  L   M      PS T+Y + I+   ++ +  +A  L G   + GV P
Sbjct: 680 KHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTP 733



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 180/400 (45%), Gaps = 8/400 (2%)

Query: 48  NPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           NP        +  +    L E  ++ +     G   +V  F +L+         + A++ 
Sbjct: 351 NPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRV 410

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            S   S     +   + ++I     K    EA++ ++ MF NG  PNV T+T +++  CK
Sbjct: 411 KSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCK 470

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G +  ALEV   M   GC PN  TY  L+ GL    ++ +A  ++  ++ DG+ P V T
Sbjct: 471 VGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIT 530

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           YT ++ G CK    + A  L     + G+TP+   +N L +  CK G   +    L    
Sbjct: 531 YTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---V 587

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           ++  +  K++Y++L++G  K G    A  + ++MV  G + D    + LL+ LC     +
Sbjct: 588 RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALC-----K 642

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           +  L +A  + ++MT      +   Y I+I  + K  K D A    +  I  GH P   T
Sbjct: 643 QKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATT 702

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +   I + C  G+I++A  L+  M      P   +Y++ I
Sbjct: 703 YTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFI 742



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 184/435 (42%), Gaps = 50/435 (11%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++F  ++ +G + +   +  L+  L+   +   A+   ++    G+ P   T++ +I+ 
Sbjct: 478 LEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQG 537

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI----- 184
            C K++F  A ++ + M  NG  P+   + +L ++LCKSGR +EA   L + G +     
Sbjct: 538 QCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVT 597

Query: 185 ---------------------------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
                                      GCK ++ TY+ LL+ LC   ++ EA  +L  + 
Sbjct: 598 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMT 657

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G+K ++  YT ++    K G+ + A  L NE I  G  P+  T+    + YCK G   
Sbjct: 658 VSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIE 717

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   L+  M++    PD ++Y+  +NG    G I  A S  K MV    E +      LL
Sbjct: 718 EAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLL 777

Query: 338 RGLC--------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
           +                 M +W E +++   +Q+ E+M K        TY  +I    K 
Sbjct: 778 KHFLKMSLINAHYVDTSGMWNWIELNMV---WQLLERMMKHGLNPTVVTYSSIIAGFCKA 834

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + +EA + L H +     P    +  +I+  C      KA+  +  M E    P   SY
Sbjct: 835 TRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESY 894

Query: 444 DMLITKLDQLEKSYD 458
             LI  L   E  YD
Sbjct: 895 HYLIVGLCD-EGDYD 908



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 186/439 (42%), Gaps = 57/439 (12%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+   L + + +   +++DG    V  +  L+      +E + A + F      GL P+ 
Sbjct: 504 IQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 563

Query: 121 WTFSIMIRCYCNKNDFFEA-----RK---------------------------VIDCMFD 148
             ++++    C      EA     RK                           +I+ M +
Sbjct: 564 QAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVN 623

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G   ++ T+++L+ +LCK  +L EAL +LDQM   G K NI  Y  ++  +   G+ + 
Sbjct: 624 EGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDH 683

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +   + + G KP   TYT  +  +CK+GR  EA  L+ E    GVTP+VVT+N   N
Sbjct: 684 AKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFIN 743

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL----------------NGLLKWGKIR 312
           G    G   +    LK M   +C P+  +Y  LL                +G+  W ++ 
Sbjct: 744 GCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELN 803

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
               + + M++ G        +S++ G C     +   LE+A  + + M  K    +   
Sbjct: 804 MVWQLLERMMKHGLNPTVVTYSSIIAGFC-----KATRLEEACVLLDHMLGKDISPNEEI 858

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA----LLLL 428
           Y ++I+     K   +A+  +   IE G  P+  +++ +I  LC EG  D+A      LL
Sbjct: 859 YTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLL 918

Query: 429 FLMYEHAKIPSRTSYDMLI 447
            + Y H ++  +   D L+
Sbjct: 919 GMDYNHNEVAWKILNDGLL 937



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 107/260 (41%), Gaps = 16/260 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E   +   +++DG    V  +N  +     +   + A             PN W
Sbjct: 712 KIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCW 771

Query: 122 TFSIMIRCYC----------------NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           T+ ++++ +                 N  +     ++++ M  +G +P V T++ ++   
Sbjct: 772 TYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGF 831

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK+ RL+EA  +LD M      PN + Y  L+K  C +    +A   + ++   G +P +
Sbjct: 832 CKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQL 891

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            +Y  ++ G C  G  + A  L  + +      N V +  L +G  K G       LL  
Sbjct: 892 ESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAA 951

Query: 286 MKKRNCLPDKISYSTLLNGL 305
           M  R+C  D  SYS L + +
Sbjct: 952 MDNRHCRIDSESYSMLTDSI 971


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 211/467 (45%), Gaps = 46/467 (9%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     VD + KA  L E + + + + + G + ++  +  ++  L      E A + 
Sbjct: 75  PTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 134

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH----PNVTTFTILVN 163
           F +    G  P+++ ++ +I+  C      EA  +        +H    P+V T+T L++
Sbjct: 135 FVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLID 194

Query: 164 SLCKSGRLKEALEVLD-QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
            LCK+GR+ EA +V D +    G  P+  TY  ++ GLC +GRVEE  E    ++N G +
Sbjct: 195 GLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 254

Query: 223 PDVYTYTA-----------------------------------VMDGFCKVGRSNEAMEL 247
           PD  TY A                                   ++DG CK GR  EA   
Sbjct: 255 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 314

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
                ERG    VVT++ L +G+C EG     V L + M  R C P+ +SY+ ++ GL +
Sbjct: 315 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 374

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK+  A   F+++++     D    N+ L GLC +     D + D  ++FE M  + + 
Sbjct: 375 AGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQR----LDTVSDGVELFESMVSQGTS 430

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            +  +Y I++  + +    + AL      +  G  P  + FN +I+ LC  G++D+A L 
Sbjct: 431 PNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEA-LE 489

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +F   E    P   SY  L+  L + E+  +A  L      QG  P+
Sbjct: 490 VFRELERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPR 536



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 189/378 (50%), Gaps = 13/378 (3%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           F  ++  L      + A      A   G  P+  T+++ I   C      +A +++  M 
Sbjct: 10  FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 69

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +    P   T+T LV+ L K+GRL EA+ VL+QM   G  P ++TY  ++ GL   GRVE
Sbjct: 70  EKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 129

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER----GVTPNVVTF 263
           EA  + +++  +G +PD + YTA++ G CK G+  EA  L  EA  R       P+VVT+
Sbjct: 130 EARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTY 189

Query: 264 NTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
            +L +G CK G  ++   +      +R  +PD ++Y+++++GL K G++      F EM 
Sbjct: 190 TSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 249

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
             G+E D     +L+ G  MK+     ++  A++V+ +M +  +V    TY I++  L K
Sbjct: 250 NRGYEPDAVTYAALIDGF-MKA----KMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
             +  EA        E G +   +T++ ++   C EG +  A+ L   M +    P+  S
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 443 YDMLITKL---DQLEKSY 457
           Y+++I  L    +L K+Y
Sbjct: 365 YNIIIRGLCRAGKLAKAY 382



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 194/414 (46%), Gaps = 11/414 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   + +   + G       +N  +  L      + A +   +       P + T++ 
Sbjct: 23  LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 82

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++          EA  V++ M + G  P + T+T++++ L K+GR++EA  +   M   G
Sbjct: 83  LVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 142

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV----KNDGLKPDVYTYTAVMDGFCKVGRS 241
           C+P+   Y  L+KGLC  G+ EEAY +         +    PDV TYT+++DG CK GR 
Sbjct: 143 CRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRI 202

Query: 242 NEAMELL-NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            EA ++  +EA+ERG  P+ VT+ ++ +G CK G   +G      M+ R   PD ++Y+ 
Sbjct: 203 LEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAA 262

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G +K   I  A  ++++M++ G  V     N +L GLC     +   + +AY  F  
Sbjct: 263 LIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC-----KAGRVAEAYATFLA 317

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++  V    TY  ++           A+      ++ G  P  +++N +I+ LC  GK
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ-LEKSYDACALYGAALKQGVIP 473
           + KA      + +    P   +++  +  L Q L+   D   L+ + + QG  P
Sbjct: 378 LAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSP 431



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 10/362 (2%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           +P+   F+++I   C +    EA  V++     G  P+  T+ + ++ LCK+ R+ +A +
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +L +M    C P   TY  L+ GL   GR++EA  +L  +   G  P + TYT V+DG  
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR----NCL 292
           K GR  EA  +  + +  G  P+   +  L  G CK G P +   L K    R      +
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIF-KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
           PD ++Y++L++GL K G+I  A  +F  E V  GF  D     S++ GLC     +   +
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLC-----KLGRV 238

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           E+  + F +M  +    D  TY  +I    K K   +A       ++ G +  T+T+N +
Sbjct: 239 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNII 298

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           +  LC  G++ +A      M E   + +  +Y  L+           A  L+   L +G 
Sbjct: 299 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 358

Query: 472 IP 473
            P
Sbjct: 359 EP 360



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 144/292 (49%), Gaps = 10/292 (3%)

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P++  +  ++ GLC   R++EA+ +L      G +PD  TY   +DG CK  R ++A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +LL +  E+   P  VT+  L +G  K G   + + +L+ M ++   P   +Y+ +++GL
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK- 364
            K G++  A  IF +M+  G   D  +  +L++GLC KS +     E+AY ++++   + 
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLC-KSGKP----EEAYALYKEANARK 177

Query: 365 ---VSVTDPGTYGIVIRTLGKGKKTDEAL-IHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
               +V D  TY  +I  L K  +  EA  +    A+E G IP  +T+ ++I  LC  G+
Sbjct: 178 HHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGR 237

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           +++       M      P   +Y  LI    + +    A  +Y   L+ G +
Sbjct: 238 VEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTV 289



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 52/108 (48%)

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D   + +VI  L + K+ DEA   L  A+  G  P  +T+N  I  LC   ++D A  LL
Sbjct: 6   DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
             M E   +P+  +Y  L+  L +  +  +A A+    +++G  P  K
Sbjct: 66  KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLK 113


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 187/389 (48%), Gaps = 11/389 (2%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + +N L+ AL    +   A ++ S     G  P+++TF+ +I  YC       A  +   
Sbjct: 130 ATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCK 189

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G+  +  ++  L+   C++GR+ EALE+  +M     +P++ T+  L+KGLC  GR
Sbjct: 190 MPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLCDAGR 245

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            EE   ML  +K  G +P    Y A++D +C+  ++ EA ++LNE  + G+ P VVT   
Sbjct: 246 GEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTI 305

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + N YC+EG     V + + M+ + C P+  +Y+ ++ G    GK+  A+++  +M   G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECG 365

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            E D    N L+RG C+        +  A+++   M       D  TY ++I  L K  K
Sbjct: 366 VEPDVVTYNLLIRGQCIDGH-----IGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGK 420

Query: 386 TDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
            DEA   L   +E   I P ++TFN VI  LC  GK D A   L  M      P   +Y 
Sbjct: 421 VDEA-CSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYS 479

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
             I  L + + S +        L++ V P
Sbjct: 480 PFIENLCKTKGSQEGLFFIDEMLQKDVKP 508



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 184/391 (47%), Gaps = 8/391 (2%)

Query: 69  RIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
           RID    + ++ T   +     L+  L      E  +    +    G  P +  ++ ++ 
Sbjct: 214 RIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVD 273

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
            +C +    EA K+++ MFD+G  P V T TI+VN+ C+ GR+  A+ V + M   GC+P
Sbjct: 274 LWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEP 333

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N+ TYN +++G C  G+V +A  +L  ++  G++PDV TY  ++ G C  G    A  LL
Sbjct: 334 NVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLL 393

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
                 G+  +  T+N L +  CK G   +   L   ++ R   P+ ++++T++NGL K 
Sbjct: 394 RLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKA 453

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           GK   A +  + M+  G+  D    +  +  LC     ++ L        ++M +K    
Sbjct: 454 GKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLF-----FIDEMLQKDVKP 508

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
               Y IVI  L   +    A       +  G  P  +T+   ++A C EG++D+A  ++
Sbjct: 509 STVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVV 568

Query: 429 FLMYEHAKIPSRTSYDMLI---TKLDQLEKS 456
             M +   I    +Y+ LI   T + Q +++
Sbjct: 569 TEMKKCRTIVDAMAYNTLIDGHTSIGQTDRA 599



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 180/404 (44%), Gaps = 46/404 (11%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+F  +   G +     +  L+         + A++ F E +     P+ +T + +++  
Sbjct: 185 DLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGL 240

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C+     E   ++  M + G+ P    +  LV+  C+  + +EA ++L++M   G  P +
Sbjct: 241 CDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCV 300

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            T   ++   C  GR+  A  +  +++  G +P+V+TY A++ GFC  G+  +AM LL++
Sbjct: 301 VTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQ 360

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             E GV P+VVT+N L  G C +G       LL+LM+      D+ +Y+ L++ L K GK
Sbjct: 361 MRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGK 420

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A S+F  +   G   +    N+++ GLC                             
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLC----------------------------- 451

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
                      K  K D A   L + I  G+ P T T++  I+ LC      + L  +  
Sbjct: 452 -----------KAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDE 500

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYD-ACALYGAALKQGVIP 473
           M +    PS  +Y ++I +L   E++Y  A  ++G  + QG  P
Sbjct: 501 MLQKDVKPSTVNYTIVINRLFN-ERNYGLATRIWGQMVSQGCSP 543



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 191/429 (44%), Gaps = 50/429 (11%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +F+S++  G   +V  +N ++       +   A+    +    G+ P+  T++++IR 
Sbjct: 320 VRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRG 379

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C       A +++  M  NG   +  T+ +L+++LCK+G++ EA  + D +   G +PN
Sbjct: 380 QCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPN 439

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             T+N ++ GLC  G+ + A   L N+ + G  PD YTY+  ++  CK   S E +  ++
Sbjct: 440 SVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFID 499

Query: 250 EAIER-----------------------------------GVTPNVVTFNTLFNGYCKEG 274
           E +++                                   G +P+VVT+ T    YC EG
Sbjct: 500 EMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEG 559

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV-------RFGFE 327
              +   ++  MKK   + D ++Y+TL++G    G+   AV+I K M         F F 
Sbjct: 560 RLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFF 619

Query: 328 VDERMMNSLLRG--LCMKS---WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
           +  R +        + +K+   W+  + L D +++FE M K    +   TY  ++    +
Sbjct: 620 ILLRHLLQRRLAEHVPLKATSVWKTIE-LADVFELFELMKKNSVPSSARTYLSILEGFSE 678

Query: 383 GKKTDEALIHLHHAIEMGHIP-RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
            ++ DE +  L   ++  ++P     +N ++   C       A  LL  M  H  +P+  
Sbjct: 679 ERRLDE-VTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLI 737

Query: 442 SYDMLITKL 450
            Y  L++ L
Sbjct: 738 FYQYLLSGL 746



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 153/321 (47%), Gaps = 9/321 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P   T+  L+ +LC+   L+ A   L  M R G +P+  T+N L+ G C   ++E A+++
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G   D  +Y A+++GFC+ GR +EA+EL  E  +    P++ T   L  G C 
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCD 242

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   +G+ +L+ MK+    P   +Y+ L++   +  K   A  I  EM   G      M
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGL-----M 297

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
              +   + + ++  +  +  A +VFE M  K    +  TY  +++      K  +A+  
Sbjct: 298 PCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMAL 357

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L    E G  P  +T+N +I+  C +G I  A  LL LM  +     + +Y++LI  L +
Sbjct: 358 LDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCK 417

Query: 453 LEKSYDACALYGAALKQGVIP 473
             K  +AC+L+     +G+ P
Sbjct: 418 TGKVDEACSLFDGLEYRGIRP 438



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/409 (21%), Positives = 159/409 (38%), Gaps = 21/409 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   +FD ++  G   +   FN ++  L    + + A  F     S G AP+++
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTY 476

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S  I   C      E    ID M      P+   +TI++N L        A  +  QM
Sbjct: 477 TYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQM 536

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P++ TY   ++  C  GR++EA  ++  +K      D   Y  ++DG   +G++
Sbjct: 537 VSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQT 596

Query: 242 NEAMELLNEAIERGVTPNVVTF----NTLFNGYCKEGTPMKGVG------------LLKL 285
           + A+ +L         PN  TF      L      E  P+K               L +L
Sbjct: 597 DRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFEL 656

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           MKK +      +Y ++L G  +  ++    S+   M      ++E + N+L+   C    
Sbjct: 657 MKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFC---- 712

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            +  +  DA+ +   M     + +   Y  ++  L    + D A      +    +    
Sbjct: 713 -KLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDE 771

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
           I +  +I     +G  D    ++ ++ +    PS  +Y ML  +L   E
Sbjct: 772 IVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEELPTRE 820


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 202/425 (47%), Gaps = 12/425 (2%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
            SL+ Q     IK   L + ID+F  + +     SV DF  L+  +V +   +  +    
Sbjct: 48  ESLKLQSGFHEIKG--LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHK 105

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           +     +  N+++F+I+++C+C+ +    A      +   G+HP V TF  L++ LC   
Sbjct: 106 KMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVED 165

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           R+ EAL++  QM    CKPN+ T+  L+ GLC  GRV EA  +L  +  DGL+P+  TY 
Sbjct: 166 RISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYG 221

Query: 230 AVMDGFCKVGRSNEAMELLNEAIE-RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
            ++DG CK+G +  A+ LL +  E   + PNVV +NT+ +G  K+G       L   M++
Sbjct: 222 TIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQE 281

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           +   PD ++Y+ ++NG    G+   A  + +EM+      D    ++L+        +E 
Sbjct: 282 KEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFV----KEG 337

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
              E A +++++M  +  +    TY  +I    K  + D A    +     G  P  ITF
Sbjct: 338 KFFE-AEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITF 396

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           N +I   C   ++D  + LL  M E   + +  +Y  LI    Q+     A  L    + 
Sbjct: 397 NTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMIS 456

Query: 469 QGVIP 473
            GV P
Sbjct: 457 SGVCP 461



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 153/297 (51%), Gaps = 16/297 (5%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G +  +  FN L+         +  +K   E +  GL  N+ T++ +I  +C   D   A
Sbjct: 388 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 447

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI-----------GCKP 188
           + ++  M  +G  PNV T   L++ LC +G+LK+ALE+   M +            G +P
Sbjct: 448 QDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEP 507

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           ++QTYN L+ GL   G+  EA E+   + + G+ PD  TY++++DG CK  R +EA ++ 
Sbjct: 508 DVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +    +  +P+VVTFNTL  GYCK G    G+ L   M +R  + D I+Y TL+ G  K 
Sbjct: 568 DSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKV 627

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
             I  A+ IF+EM+  G   D   + ++L GL    W  K+ LE A  + E +   V
Sbjct: 628 DNIDGALDIFQEMISSGVYPDTITIRNMLTGL----W-SKEELERAVAMLEDLQMSV 679



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 185/397 (46%), Gaps = 16/397 (4%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++  L        A   F E     + P+  T++ MI  +C    + +A +++  M 
Sbjct: 256 YNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEML 315

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +   +P+V TF+ L+N+  K G+  EA E+ D+M      P+  TY+ ++ G C   R++
Sbjct: 316 ERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLD 375

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A  M       G  PD+ T+  ++ G+C+  R ++ ++LL+E  E G+  N +T+ TL 
Sbjct: 376 AAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 435

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF--- 324
           +G+C+ G       LL+ M      P+ ++ +TLL+GL   GK++ A+ +FK M +    
Sbjct: 436 HGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 325 --------GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
                   G E D +  N L+ GL      E   LE A +++E+M  +  V D  TY  +
Sbjct: 496 IDASRPFNGVEPDVQTYNILICGL----INEGKFLE-AEELYEEMPHRGIVPDTITYSSM 550

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I  L K  + DEA             P  +TFN +I   C  G +D  L L   M +   
Sbjct: 551 IDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +    +Y  LI    +++    A  ++   +  GV P
Sbjct: 611 VADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYP 647



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 215/494 (43%), Gaps = 97/494 (19%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L   +  F  I K G + +V  FN LL  L + +    A+  F +       PN  TF
Sbjct: 130 SKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PNVVTF 185

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + ++   C +    EA  ++D M ++G  PN  T+  +V+ +CK G    AL +L +M  
Sbjct: 186 TTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 245

Query: 184 IG------------------------------------CKPNIQTYNCLLKGLCYVGRVE 207
           +                                       P+I TYNC++ G C  GR  
Sbjct: 246 VSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWS 305

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER------------- 254
           +A ++L  +    + PDV T++A+++ F K G+  EA EL +E + R             
Sbjct: 306 DAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMI 365

Query: 255 ----------------------GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                                 G +P+++TFNTL  GYC+      G+ LL  M +   +
Sbjct: 366 DGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLV 425

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            + I+Y+TL++G  + G +  A  + +EM+  G   +    N+LL GLC     +   L+
Sbjct: 426 ANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLC-----DNGKLK 480

Query: 353 DAYQVFEKMTK-KVSVT----------DPGTYGIVIRTL---GKGKKTDEALIHLHHAIE 398
           DA ++F+ M K K+ +           D  TY I+I  L   GK  + +E    + H   
Sbjct: 481 DALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHR-- 538

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G +P TIT++++I  LC + ++D+A  +   M   +  P   +++ LIT   +     D
Sbjct: 539 -GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDD 597

Query: 459 ACALYGAALKQGVI 472
              L+    ++G++
Sbjct: 598 GLELFCEMGQRGIV 611



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 88/184 (47%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K ++DI  S   +G    V  +N L+  L+   +   A + + E    G+ P++ T+S M
Sbjct: 491 KSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I   C ++   EA ++ D M    + P+V TF  L+   CK+G + + LE+  +MG+ G 
Sbjct: 551 IDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
             +  TY  L+ G   V  ++ A ++   + + G+ PD  T   ++ G         A+ 
Sbjct: 611 VADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVA 670

Query: 247 LLNE 250
           +L +
Sbjct: 671 MLED 674



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/150 (20%), Positives = 62/150 (41%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  ++++ +   G       ++ ++  L   +  + A + F    S   +P+  TF+ +I
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLI 586

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             YC      +  ++   M   G   +  T+  L+    K   +  AL++  +M   G  
Sbjct: 587 TGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVY 646

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           P+  T   +L GL     +E A  ML +++
Sbjct: 647 PDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 1/134 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D + K S L E   +FDS+     +  V  FN L+         +  ++ 
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLEL 601

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F E    G+  ++ T+  +I  +   ++   A  +   M  +G +P+  T   ++  L  
Sbjct: 602 FCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWS 661

Query: 168 SGRLKEALEVLDQM 181
              L+ A+ +L+ +
Sbjct: 662 KEELERAVAMLEDL 675


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 199/389 (51%), Gaps = 5/389 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N ++      N+ ++A + F    S G +P+  T++IMI   C++     A +V+D
Sbjct: 131 VYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMD 190

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +  +G  P+V T+TIL+ +    GR+ EALE+ D++   G +P++ TYN +++G+C  G
Sbjct: 191 ELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEG 250

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
             + A + + ++   G  PDV +Y  ++  F    R  +   L+ + +  G  PNVVT +
Sbjct: 251 MEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHS 310

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L + +C+EG   + V +L++MK++   PD  SY  L++   K G++  A+   ++MV  
Sbjct: 311 ILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSD 370

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D    N++L  LC   +   DL   A  VFEK+ +         Y  +   L    
Sbjct: 371 GCLPDIVNYNTILATLC--KFGCADL---ALDVFEKLDEVGCPPTVRAYNTMFSALWSCG 425

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
              +AL  +   I  G  P  IT+N++I  LC +G +D+A+ LL  M      P+  S++
Sbjct: 426 NKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFN 485

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
           +++  + +  + ++   L    +++G +P
Sbjct: 486 IVLLGMCKAHRVFEGIELLITMVEKGCLP 514



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 185/407 (45%), Gaps = 40/407 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+   ++ D + KDG   SV  +  L+ A ++      A++ F E  S GL P+ +T++ 
Sbjct: 182 LELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNA 241

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +IR  C +     A   +  +   G +P+V ++ IL+ S     R ++   ++  M   G
Sbjct: 242 IIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSG 301

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C+PN+ T++ L+   C  GRV EA  +L  +K  GL PD Y+Y  ++  FCK GR + A+
Sbjct: 302 CEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAI 361

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E L + +  G  P++V +NT+    CK G     + + + + +  C P   +Y+T+ + L
Sbjct: 362 EYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSAL 421

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G    A+ +  EM+R G + DE   NSL+  LC                        
Sbjct: 422 WSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRD---------------------- 459

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
                   G+V          DEA+  L         P  I+FN V+  +C   ++ + +
Sbjct: 460 --------GLV----------DEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGI 501

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            LL  M E   +P+ TSY +LI  +       +A  L  +  + GVI
Sbjct: 502 ELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVI 548



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 145/288 (50%), Gaps = 6/288 (2%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+N  C++G+  E+L  L+ +   G KP++     L+KG      +++A  ++  ++  G
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
             PDVY+Y A++ GF K  + + A ++ +    RG +P+VVT+N +    C  G      
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            ++  + K  C P  I+Y+ L+   +  G+I  A+ +F E+V  G   D    N+++RG+
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C +  E++     A      ++ +    D  +Y I++R+     + ++    +   +  G
Sbjct: 247 CKEGMEDR-----ALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSG 301

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
             P  +T + +I + C EG++ +A+ +L +M E    P   SYD LI+
Sbjct: 302 CEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLIS 349


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 201/442 (45%), Gaps = 48/442 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N  L A V  +    AV  ++  +  G   + P   T++I+I 
Sbjct: 42  VFDELLRRGRGASIYGLNRAL-ADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIG 100

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
           C C           +  +   G+  +  TFT L+  LC   R  +A++ VL +M  +GC 
Sbjct: 101 CCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 160

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---------------------------- 219
           P++ +YN LLKGLC   R +EA E+L  + +D                            
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKA 220

Query: 220 ----------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
                     G+ PDV TY++++   CK    ++AME+LN  ++ GV P+ +T+N++ +G
Sbjct: 221 YSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 280

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YC  G P + +G LK M+     P+ ++YS+L+N L K G+   A  IF  M + G E D
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                +LL+G     +  K  L + + + + M +     D   + I+I    K +K D+A
Sbjct: 341 IATYRTLLQG-----YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           ++      + G  P  + +  VI  LC  G +D A+L    M +    P+   Y  LI  
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455

Query: 450 LDQLEKSYDACALYGAALKQGV 471
           L   +K   A  L    L +G+
Sbjct: 456 LCTCDKWDKAEELILEMLDRGI 477



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 198/408 (48%), Gaps = 7/408 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     ++ DG   +V  ++ L+  L        A K F   +  GL P+  T+  +
Sbjct: 288 KEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTL 347

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG  P+   F IL+ +  K  ++ +A+ V  +M + G 
Sbjct: 348 LQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 407

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN+  Y  ++  LC  G V++A      + ++GL P++  YT+++ G C   + ++A E
Sbjct: 408 NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEE 467

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E ++RG+  N + FN++ + +CKEG  ++   L  LM +    PD I+Y+TL++G  
Sbjct: 468 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCC 527

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A  +   MV  G + D     +L+ G C  S      ++DA  +F++M     
Sbjct: 528 LAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR-----MDDALALFKEMVSSGV 582

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             +  TY I+++ L   ++T  A        + G      T+N ++  LC     D+AL 
Sbjct: 583 SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALR 642

Query: 427 LLF-LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   L     ++ +RT ++++I  L +  +  +A  L+ A    G++P
Sbjct: 643 MFQNLCLTDLQLETRT-FNIMIGALLKCGRMDEAKDLFAAHSANGLVP 689



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 210/430 (48%), Gaps = 19/430 (4%)

Query: 58  VDRIKASPL-------KERIDIFDSIKKDGTNWS----VSDFNDLLMALVMLNEQETAVK 106
           VD I  +PL       K   D  D + +  T       V  +N+LL  L   N  + A++
Sbjct: 125 VDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALE 184

Query: 107 FF---SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
                ++    G  P+  +++ ++  +  + D  +A      M D G  P+V T++ ++ 
Sbjct: 185 LLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIA 244

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK+  + +A+EVL+ M + G  P+  TYN +L G C  G+ +EA   L  +++DG++P
Sbjct: 245 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEP 304

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V TY+++M+  CK GRS EA ++ +   +RG+ P++ T+ TL  GY  +G  ++   LL
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 364

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            LM +    PD   ++ L+    K  K+  A+ +F +M + G   +     +++  LC K
Sbjct: 365 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC-K 423

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           S      ++DA   FE+M  +    +   Y  +I  L    K D+A   +   ++ G   
Sbjct: 424 SGS----VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL 479

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            TI FN++I + C EG++ ++  L  LM      P   +Y+ LI       K  +A  L 
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 539

Query: 464 GAALKQGVIP 473
            + +  GV P
Sbjct: 540 ASMVSVGVKP 549



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 198/396 (50%), Gaps = 20/396 (5%)

Query: 61  IKASPLKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           I A   +E++D    +F  +++ G N +V  +  ++  L      + A+ +F +    GL
Sbjct: 383 ICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGL 442

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            PN   ++ +I   C  + + +A ++I  M D G   N   F  +++S CK GR+ E+ +
Sbjct: 443 TPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 502

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           + D M RIG KP+I TYN L+ G C  G+++EA ++L ++ + G+KPD+ TY  +++G+C
Sbjct: 503 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 562

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           +V R ++A+ L  E +  GV+PN++T+N +  G            L   + K     +  
Sbjct: 563 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS 622

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL--CMKSWEEKDLLEDA 354
           +Y+ +L+GL K      A+ +F+ +     +++ R  N ++  L  C +  E KDL    
Sbjct: 623 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL---- 678

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
              F   +    V D  TY ++   L   G  ++ D+  + +    E G    +   N++
Sbjct: 679 ---FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME---ENGCSADSRMLNSI 732

Query: 412 IQALCGEGKIDKALLLLFLMYE-HAKIPSRTSYDML 446
           ++ L   G I +A   LF++ E H  + + T+  +L
Sbjct: 733 VRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 768



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 185/389 (47%), Gaps = 9/389 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   + D + ++G       FN L+ A     + + A+  FS+   +GL PN   +  
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A    + M D G  PN+  +T L++ LC   +  +A E++ +M   G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              N   +N ++   C  GRV E+ ++   +   G+KPD+ TY  ++DG C  G+ +EA 
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +LL   +  GV P++VT+ TL NGYC+       + L K M      P+ I+Y+ +L GL
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
               +   A  ++  + + G +++    N +L GLC     + +L ++A ++F+ +    
Sbjct: 597 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC-----KNNLTDEALRMFQNLCLTD 651

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEA--LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
              +  T+ I+I  L K  + DEA  L   H A   G +P   T++ + + L  +G +++
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA--NGLVPDVRTYSLMAENLIEQGSLEE 709

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
              L   M E+         + ++ KL Q
Sbjct: 710 LDDLFLSMEENGCSADSRMLNSIVRKLLQ 738



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 170/360 (47%), Gaps = 44/360 (12%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P V T+ IL+   C++GRL      L  + + G + +  T+  LLKGLC   R  +A ++
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 213 LMNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAMELLN-EAIER--GVTPNVVTFNTLFN 268
           ++    + G  PDV++Y  ++ G C   RS EA+ELL+  A +R  G  P+VV++NT+ N
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G+ KEG   K       M  R  LPD ++YS+++  L K   +  A+ +   MV+ G   
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 329 DERMMNSLLRGLCMKSWEEKDLL-------------------------------EDAYQV 357
           D    NS+L G C  S + K+ +                                +A ++
Sbjct: 270 DCMTYNSILHGYC-SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 328

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQ 413
           F+ MTK+    D  TY    RTL +G  T  AL+ +H  +++    G  P    FN +I 
Sbjct: 329 FDSMTKRGLEPDIATY----RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A   + K+D+A+L+   M +H   P+   Y  +I  L +     DA   +   + +G+ P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 149/345 (43%), Gaps = 17/345 (4%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV--LDQMGRIGC---KPNIQT 192
           +AR V D +   G   ++     L  +L    R   A  V   ++M R G     P + T
Sbjct: 38  DARHVFDELLRRGRGASIYG---LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHT 94

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEA 251
           Y  L+   C  GR++  +  L NV   G + D  T+T ++ G C   R+++AM++ L   
Sbjct: 95  YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM---KKRNCLPDKISYSTLLNGLLKW 308
            E G  P+V ++N L  G C E    + + LL +M   +     PD +SY+T+LNG  K 
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G    A S + EM+  G   D    +S++  LC     +K     A +V   M K   + 
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDK-----AMEVLNTMVKNGVMP 269

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  TY  ++       +  EA+  L      G  P  +T+++++  LC  G+  +A  + 
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M +    P   +Y  L+          +  AL    ++ G+ P
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP 374


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 194/389 (49%), Gaps = 5/389 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V   N L+ A     + + A+      ++ GL P   TF+ +++  C    F +A++V  
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFR 251

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M      P+V +F IL+   C+ G ++EA++   +M + G  P++ +++CL+      G
Sbjct: 252 AMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRG 311

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +++ A   L  +K  GL PD   YT V+ GFC+ G  +EA+ + +E +  G  P+VVT+N
Sbjct: 312 KMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYN 371

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL NG CK+   +    LL  MK+R   PD  +++TL++G  + G    A+ +F  ++  
Sbjct: 372 TLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQ 431

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
               D    NSL+ G+C K       L  A ++++ M  +    +  TY I+I +  +  
Sbjct: 432 RLRPDVVAYNSLIDGMCRKGD-----LAKANELWDDMHAREIFPNHVTYSILIDSHCEKG 486

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + +EA   L   +  G++P  +T+N++I+  C  G + K    L  M +   +P   +++
Sbjct: 487 QVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFN 546

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            LI    + E  + A  ++    K+ V P
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKEMVQP 575



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 198/407 (48%), Gaps = 7/407 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F ++ +      V  FN L+     + E E A+KF+ E    G+ P+  +FS +I  +
Sbjct: 248 EVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLF 307

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             +     A   +  M   G  P+   +T+++   C++G + EAL V D+M  +GC P++
Sbjct: 308 STRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDV 367

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN LL GLC   R+ +A E+L  +K  G+ PD+ T+T ++ G+C+ G   +A++L + 
Sbjct: 368 VTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDT 427

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + + + P+VV +N+L +G C++G   K   L   M  R   P+ ++YS L++   + G+
Sbjct: 428 LLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQ 487

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A     EMV  G   +    NS+++G C     +K       Q  +KM +   + D 
Sbjct: 488 VEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKK-----GQQFLQKMMQDNILPDL 542

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLF 429
            T+  +I    K +    A  ++ + +E   + P  +T+N +I     +G +++A  +  
Sbjct: 543 ITFNTLIHGYIKEENMHGAF-NVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK 601

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            M      P R +Y  LI        S +A  L+   + +G  P  K
Sbjct: 602 KMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 193/416 (46%), Gaps = 5/416 (1%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           R +A  +   I + DS+   G    +  FN +L  L      + A + F       +AP+
Sbjct: 202 RFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPD 261

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             +F+I+I  +C   +  EA K    M   G  P+V +F+ L+      G++  A   L 
Sbjct: 262 VRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLR 321

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M  +G  P+   Y  ++ G C  G + EA  +   +   G  PDV TY  +++G CK  
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQH 381

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R  +A ELLNE  ERGVTP++ TF TL +GYC++G   K + L   +  +   PD ++Y+
Sbjct: 382 RLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYN 441

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           +L++G+ + G +  A  ++ +M        E   N +   + + S  EK  +E+A+   +
Sbjct: 442 SLIDGMCRKGDLAKANELWDDM-----HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLD 496

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M  K ++ +  TY  +I+   +     +    L   ++   +P  ITFN +I     E 
Sbjct: 497 EMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEE 556

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            +  A  +  +M +    P   +Y+M+I    +     +A  ++      G+ P R
Sbjct: 557 NMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDR 612



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 176/355 (49%), Gaps = 5/355 (1%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N++T +IM+  YC   +F +A  VI  M      P+V T  +L+++  ++G +  A+ ++
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D M   G KP I T+N +LKGLC   R ++A E+   +    + PDV ++  ++ GFC+V
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRV 275

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G   EAM+   E  +RGVTP+VV+F+ L   +   G        L+ MK    +PD + Y
Sbjct: 276 GEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIY 335

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + ++ G  + G +  A+ +  EMV  G   D    N+LL GLC     ++  L DA ++ 
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLC-----KQHRLLDAEELL 390

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            +M ++    D  T+  +I    +    ++AL      +     P  + +N++I  +C +
Sbjct: 391 NEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRK 450

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G + KA  L   M+     P+  +Y +LI    +  +  +A       + +G +P
Sbjct: 451 GDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLP 505



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 151/303 (49%), Gaps = 5/303 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E + + D +   G    V  +N LL  L   +    A +  +E    G+ P+  
Sbjct: 344 RAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLC 403

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  YC   +F +A ++ D +      P+V  +  L++ +C+ G L +A E+ D M
Sbjct: 404 TFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM 463

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 PN  TY+ L+   C  G+VEEA+  L  + + G  P++ TY +++ G+C+ G  
Sbjct: 464 HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +  + L + ++  + P+++TFNTL +GY KE        +  +M+K    PD ++Y+ +
Sbjct: 524 KKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMI 583

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG  + G +  A  +FK+M   G E D     SL+ G            ++A+Q+ ++M
Sbjct: 584 INGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNS-----KEAFQLHDEM 638

Query: 362 TKK 364
             +
Sbjct: 639 MHR 641



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 5/260 (1%)

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P  Q ++ L++      +  EA+E    + +  +        A++    + G  + A E 
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
               +      N  T N + + YCK     K   ++  M+KR   PD ++++ L++   +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G +  A+++   M   G +      NS+L+GLC     +K     A +VF  M +    
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDK-----AKEVFRAMDQCSVA 259

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  ++ I+I    +  + +EA+       + G  P  ++F+ +I      GK+D A   
Sbjct: 260 PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAY 319

Query: 428 LFLMYEHAKIPSRTSYDMLI 447
           L  M     +P    Y M+I
Sbjct: 320 LREMKGLGLVPDGVIYTMVI 339


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 194/389 (49%), Gaps = 5/389 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE  D+FD++   G N  V  +N +L               F      G+AP+ +
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 395

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+++I+ Y N     +A  + + M D+G  P+V T+  ++ +LC+ G++ +A+E  +QM
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+   YNCL++G C  G + +A E++  + N+G+  D+  ++++++  CK+GR 
Sbjct: 456 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  + +  +  G+ P+ V ++ L +GYC  G   K + +   M      P+ + Y TL
Sbjct: 516 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 575

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG  K G+I   +S+F+EM++ G +    + + ++ GL             A   F +M
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVP-----AKVKFHEM 630

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           T+     D  TY IV+R L K +  DEA+        M      IT N +I  +    ++
Sbjct: 631 TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRV 690

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++A  L   +     +PS  +Y ++IT L
Sbjct: 691 EEAKDLFASISRSRLVPSVVTYSIMITNL 719



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 206/437 (47%), Gaps = 30/437 (6%)

Query: 60  RIKASPLK--ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET-------AVKFFSE 110
           R++   L+  E  D+ D +++ GT     D N  L AL               AV  F+ 
Sbjct: 37  RVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNR 96

Query: 111 ASSYG-----LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           A+S       L+P S T++I++ C    +    A      +   G   N+     L+   
Sbjct: 97  AASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGF 156

Query: 166 CKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LK 222
           C++ R  EAL++L  +   +GC P++ +Y+ LLK LC  G+  +A ++L  +   G    
Sbjct: 157 CEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 216

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P+V  Y  V+DGF K G  N+A +L  E ++RG+ P++VT+N++ +  CK     K    
Sbjct: 217 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 276

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L+ M  +  LP+  +Y+ L+ G    G+ + AV +FKEM R     D   ++ L+  LC 
Sbjct: 277 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLC- 335

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM--- 399
               +   +++A  VF+ M  K    D  +Y I++     G  T   L+ +    ++   
Sbjct: 336 ----KYGKIKEARDVFDTMAMKGQNPDVFSYNIML----NGYATKGCLVDMTDLFDLMLG 387

Query: 400 -GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G  P   TFN +I+A    G +DKA+++   M +H   P   +Y  +I  L ++ K  D
Sbjct: 388 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 447

Query: 459 ACALYGAALKQGVIPQR 475
           A   +   + QGV P +
Sbjct: 448 AMEKFNQMIDQGVAPDK 464



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 177/369 (47%), Gaps = 8/369 (2%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           NW+   +N+L+       + + AV+ F E   + + P+  T S+++   C      EAR 
Sbjct: 289 NWT---YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V D M   G +P+V ++ I++N     G L +  ++ D M   G  P+  T+N L+K   
Sbjct: 346 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 405

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G +++A  +   +++ G+KPDV TY  V+   C++G+ ++AME  N+ I++GV P+  
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 465

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            +N L  G+C  G+ +K   L+  +       D + +S+++N L K G++  A +IF   
Sbjct: 466 AYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLT 525

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           V  G   D  + + L+ G C+    EK     A +VF+ M       +   Y  ++    
Sbjct: 526 VNVGLHPDAVVYSMLMDGYCLVGKMEK-----ALRVFDAMVSAGIEPNVVVYCTLVNGYC 580

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K  + DE L      ++ G  P TI ++ +I  L   G+   A +    M E        
Sbjct: 581 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDIC 640

Query: 442 SYDMLITKL 450
           +Y++++  L
Sbjct: 641 TYNIVLRGL 649



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 168/371 (45%), Gaps = 5/371 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F E    G+ P+  T++ ++   C      +A   +  M +    PN  T+  L+ 
Sbjct: 238 ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 297

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
               +G+ KEA+ V  +M R    P++ T + L+  LC  G+++EA ++   +   G  P
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV++Y  +++G+   G   +  +L +  +  G+ P+  TFN L   Y   G   K + + 
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 417

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M+     PD ++Y T++  L + GK+  A+  F +M+  G   D+   N L++G C  
Sbjct: 418 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 477

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                 LL+    + E M   + + D   +  +I  L K  +  +A       + +G  P
Sbjct: 478 G----SLLKAKELISEIMNNGMHL-DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 532

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             + ++ ++   C  GK++KAL +   M      P+   Y  L+    ++ +  +  +L+
Sbjct: 533 DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLF 592

Query: 464 GAALKQGVIPQ 474
              L++G+ P 
Sbjct: 593 REMLQRGIKPS 603



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 128/274 (46%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   I  +G +  +  F+ ++  L  L     A   F    + GL P++  +S+++  Y
Sbjct: 485 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGY 544

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A +V D M   G  PNV  +  LVN  CK GR+ E L +  +M + G KP+ 
Sbjct: 545 CLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPST 604

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             Y+ ++ GL   GR   A      +   G+  D+ TY  V+ G  K    +EA+ L  E
Sbjct: 605 ILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 664

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
                V  N++T NT+ +G  +     +   L   + +   +P  ++YS ++  L+K G 
Sbjct: 665 LRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGL 724

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           +  A  +F  M   G E + R++N ++R L  K+
Sbjct: 725 VEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKN 758



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 156/357 (43%), Gaps = 5/357 (1%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           +PN   ++ +I  +  + D  +A  +   M   G  P++ T+  +V++LCK+  + +A  
Sbjct: 216 SPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEA 275

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
            L QM      PN  TYN L+ G    G+ +EA  +   ++   + PDV T + +M   C
Sbjct: 276 FLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLC 335

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G+  EA ++ +    +G  P+V ++N + NGY  +G  +    L  LM      PD  
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 395

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +++ L+      G +  A+ IF EM   G + D     +++  LC         ++DA +
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK-----MDDAME 450

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
            F +M  +    D   Y  +I+         +A   +   +  G     + F+++I  LC
Sbjct: 451 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             G++  A  +  L       P    Y ML+     + K   A  ++ A +  G+ P
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 95/214 (44%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F  + + G   S   ++ ++  L        A   F E +  G+A +  
Sbjct: 581 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDIC 640

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I++R       F EA  +   +       N+ T   +++ + ++ R++EA ++   +
Sbjct: 641 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI 700

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R    P++ TY+ ++  L   G VEEA +M  +++N G +P+      V+    K    
Sbjct: 701 SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEI 760

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
             A   L++  ER  +   +T   L + +  +GT
Sbjct: 761 VRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGT 794



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/176 (21%), Positives = 73/176 (41%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           F  + + G    +  +N +L  L      + A+  F E  +  +  N  T + MI     
Sbjct: 627 FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 686

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
                EA+ +   +  +   P+V T++I++ +L K G ++EA ++   M   GC+PN + 
Sbjct: 687 TRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRL 746

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
            N +++ L     +  A   L  +       +  T   ++D F   G   E +  L
Sbjct: 747 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 202/406 (49%), Gaps = 8/406 (1%)

Query: 71  DIFDSIKK--DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
           + FD + +   G       F  L++        E A    +   + G   +S T ++++R
Sbjct: 165 EAFDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVR 224

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
            +C +  F     +   M + G  PN+  ++  ++ LC+ G +K+A  VL++M   G KP
Sbjct: 225 AFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKP 284

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           N+ T+  L+ GLC +G +E A+ + +  VK+   KP+V+TYT ++ G+CK G+   A  L
Sbjct: 285 NVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEML 344

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L   +E+G+ PN  T+ TL +G+CK G+  +   L+  MK    LP+  +Y+ ++ G  K
Sbjct: 345 LGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCK 404

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GKI+ A  + +     G  +D+     L+   C     ++  +  A  +F++M +K   
Sbjct: 405 KGKIQEAYKVLRMATSQGLHLDKVTYTILITEHC-----KQGHITCALDLFKQMAEKSCH 459

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  TY  +I    + ++ +++       + +G +P   T+ ++I   C  GK+  AL +
Sbjct: 460 PDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKV 519

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              M +H  +P   +Y  LI+ L +  +  +A AL+   L + ++P
Sbjct: 520 FERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVP 565



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 174/359 (48%), Gaps = 6/359 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+F  + + GT  ++ +++  +  L      + A     E    GL PN +T + +I   
Sbjct: 237 DLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296

Query: 131 CNKNDFFEA-RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           C       A R  +  +  + Y PNV T+T+++   CK G+L  A  +L +M   G  PN
Sbjct: 297 CKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPN 356

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TY  L+ G C  G  + A+E++  +K +G  P++YTY A++ GFCK G+  EA ++L 
Sbjct: 357 TNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLR 416

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
            A  +G+  + VT+  L   +CK+G     + L K M +++C PD  +Y+T++    +  
Sbjct: 417 MATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQR 476

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  +  +F + +  G    ++   S++ G C         L  A +VFE+M +   + D
Sbjct: 477 QMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYC-----RLGKLTSALKVFERMVQHGCLPD 531

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             TYG +I +L K  + +EA       ++   +P  +T   +    C   KI  A+  L
Sbjct: 532 SITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFL 590



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 168/363 (46%), Gaps = 41/363 (11%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+ P+  +F  ++   C +  F EA  ++  M+  G+  +  T T++V + C+ GR +  
Sbjct: 176 GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNV 235

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            ++  +M  +G  PN+  Y+  + GLC  G V++A+ +L  +   GLKP+VYT+T+++DG
Sbjct: 236 TDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295

Query: 235 FCKVGRSNEAMELLNEAIERG-VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
            CK+G    A  L  + ++     PNV T+  +  GYCKEG   +   LL  M ++   P
Sbjct: 296 LCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           +  +Y+TL++G  K G    A  +  +M   GF  +    N+++ G C     +K  +++
Sbjct: 356 NTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFC-----KKGKIQE 410

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           AY+V    T +    D  TY I+I        T+                          
Sbjct: 411 AYKVLRMATSQGLHLDKVTYTILI--------TEH------------------------- 437

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             C +G I  AL L   M E +  P   +Y  +I    Q  +   +  L+   L  G++P
Sbjct: 438 --CKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVP 495

Query: 474 QRK 476
            ++
Sbjct: 496 TKQ 498



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 147/309 (47%), Gaps = 9/309 (2%)

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK-GLCYVGRVEEAYEML--MNVKNDGLKP 223
           ++GRL+EA ++L ++   G    ++T N +L+ GL + G    A E    M     G++P
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRP 179

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D  ++ A++ G C+ GR  EA  LL     +G   +  T   +   +C++G       L 
Sbjct: 180 DHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLF 239

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           + M +    P+ ++YS  ++GL + G ++ A  + +EMV  G + +     SL+ GLC  
Sbjct: 240 RRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKI 299

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSV-TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
            W     +E A+++F K+ K  S   +  TY ++I    K  K   A + L   +E G  
Sbjct: 300 GW-----MERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLA 354

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P T T+  +I   C  G  D+A  L+  M     +P+  +Y+ +I    +  K  +A  +
Sbjct: 355 PNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKV 414

Query: 463 YGAALKQGV 471
              A  QG+
Sbjct: 415 LRMATSQGL 423



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 135/305 (44%), Gaps = 8/305 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K        ++ + +K +G   ++  +N ++       + + A K    A+S GL  +  
Sbjct: 369 KGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKV 428

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I  +C +     A  +   M +   HP++ T+T ++   C+  +++++ ++ D+ 
Sbjct: 429 TYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKC 488

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             IG  P  QTY  ++ G C +G++  A ++   +   G  PD  TY A++   CK  R 
Sbjct: 489 LSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRL 548

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L    +++ + P  VT  TL   YC+       V  L  + KR       +   L
Sbjct: 549 EEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQ---QAHTADAL 605

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  L   G +  A    K ++   + VD     S +      S  E +    A ++ EK+
Sbjct: 606 VRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFI-----NSCYESNRYALASEISEKI 660

Query: 362 TKKVS 366
           +K++S
Sbjct: 661 SKRIS 665


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 198/435 (45%), Gaps = 31/435 (7%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +++  + + G       ++ L+  L  + + + ++K  SE    G  P+   +S ++R  
Sbjct: 66  EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
                   A  + D M   G+HP+   F  L+  LC++G++K+A E   QM + GC+PN+
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             YN LL GLC  G++E+A  +   +K+    PDV TY  ++D  CK  R  E  +L   
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G  PNV+TF+TL +G C+ G   K + +   M +  C P+K +Y+TL++GL +  K
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKD-------------------- 349
           +  A  +F++M +     D    NSL+ G C + S +E +                    
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365

Query: 350 ----------LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
                      L  A ++  +M  K    D  TY I+I  L +  K DEAL       E 
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
             +   ++  + +  LC  G ID+A  +     +   +P+  ++ +L   L +L +  DA
Sbjct: 426 KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 485

Query: 460 CALYGAALKQGVIPQ 474
             L   A  + +  Q
Sbjct: 486 QKLMEPAKARDITAQ 500



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 192/404 (47%), Gaps = 6/404 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K +  +E   + + +   G N  V  FN ++      N  E A + +      G  P++
Sbjct: 21  VKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDN 80

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            ++ I+I          E+ K++  M   G  P++  ++ LV +L K+ R+  A  + D+
Sbjct: 81  VSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDE 140

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G  P+   +  L+ GLC  G+V++A E    +   G +P+V  Y  ++ G C  G+
Sbjct: 141 MIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQ 200

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  L  E      +P+VVT+NTL +  CK     +G  L + M+    +P+ I++ST
Sbjct: 201 LEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFST 260

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL + G++  A+ +F  M+  G + ++    +L+ GLC     EK +   A ++FEK
Sbjct: 261 LIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLC---RAEKVI--QARELFEK 315

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEA-LIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           MT+     D   Y  +I    K    DEA  ++   +   G  P  +TFN +I   C  G
Sbjct: 316 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 375

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           K+ +A  L+  M          +Y +LI  L +  K  +A  +Y
Sbjct: 376 KLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVY 419



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 196/398 (49%), Gaps = 12/398 (3%)

Query: 36  SLSTAESLDLKENPRSLQAQRFVDRIKASPLKERID----IFDSIKKDGTNWSVSDFNDL 91
           SL     + ++    S+QA  +   ++A     R+D    +FD + + G +     F +L
Sbjct: 99  SLKILSEMVMRGQTPSMQA--YSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYEL 156

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           ++ L    + + A + F +   +G  PN   +++++   C+     +A  +   M  +  
Sbjct: 157 ILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSC 216

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            P+V T+  L++++CK+ R++E  ++ + M   G  PN+ T++ L+ GLC  G +E+A E
Sbjct: 217 SPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALE 276

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +  ++   G KP+ YTYT ++ G C+  +  +A EL  +  +  + P+ V +N+L  GYC
Sbjct: 277 VFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYC 336

Query: 272 KEGTPMKGVGLLKLMKKRNCL-PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           K G+  +   L + M     L P  ++++TL++G  K GK+  A  +  EM   G   D 
Sbjct: 337 KRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADS 396

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                L+ GL   +      L++A +V+++M +K  + DP +    +  L K    D+A 
Sbjct: 397 CTYRILIAGLSRATK-----LDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAY 451

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
                  + G +P   TF  + ++L   G+++ A  L+
Sbjct: 452 AVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 167/328 (50%), Gaps = 6/328 (1%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M D     NV T++ ++ SL K  + +E+ +VL++M   GC P++  +N +++G      
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +E+A E+  ++   G KPD  +Y  ++ G  K+G+ +E++++L+E + RG TP++  +++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L     K         L   M +    PD++ +  L+ GL + GK++ A   FK+M + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            + +  + N LL GLC         LE A  +F +M       D  TY  ++  + K ++
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQ-----LEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARR 235

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            +E           G++P  ITF+ +I  LC  G+++KAL +   M E    P++ +Y  
Sbjct: 236 VEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTT 295

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           LI+ L + EK   A  L+   + Q  IP
Sbjct: 296 LISGLCRAEKVIQARELF-EKMTQACIP 322



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 163/348 (46%), Gaps = 11/348 (3%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           +A N +T+S +I+    +    E+ KV++ M   G +P+V  F  ++    +S  +++A 
Sbjct: 6   IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           EV   M   G KP+  +Y+ L+ GL  +G+++E+ ++L  +   G  P +  Y++++   
Sbjct: 66  EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
            K  R + A  L +E I  G  P+ + F  L  G C+ G         K M K  C P+ 
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
             Y+ LL+GL   G++  A ++F EM       D    N+LL  +C     +   +E+  
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVC-----KARRVEEGC 240

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++FE M     V +  T+  +I  L +  + ++AL      +E G  P   T+  +I  L
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT------KLDQLEKSY 457
           C   K+ +A  L   M +    P   +Y+ LI        +D+ EK Y
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLY 348



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 137/287 (47%), Gaps = 5/287 (1%)

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N+ TY+ ++K L    + EE+Y++L  +   G  PDV+ +  VM GF +     +A E+ 
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
              +E G  P+ V+++ L +G  K G   + + +L  M  R   P   +YS+L+  L K 
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
            ++  A S+F EM+R G   D  M   L+ GLC     +   ++DA + F++M K     
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLC-----QAGKVKDASERFKQMPKHGCQP 183

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +   Y +++  L    + ++A             P  +T+N ++ A+C   ++++   L 
Sbjct: 184 NVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLF 243

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
             M     +P+  ++  LI  L +  +   A  ++G+ L+ G  P +
Sbjct: 244 EAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNK 290


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 192/401 (47%), Gaps = 5/401 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FD +K+ G    +  FN +L   + LN+ ET    ++E     +    +TF+IMI   C 
Sbjct: 189 FDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCK 248

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           +    +A+  I  M + G  PNV T+  +++  C  GR++ A  VLD M   G +P+  T
Sbjct: 249 EGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYT 308

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y  L+ G+C  G++EEA  +L  +K  GL P   TY  ++DG+C  G   +A    +E +
Sbjct: 309 YGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMV 368

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
            R + P V T+N L +    EG   +  G++K M     +PD I+Y+ L+NG  + G  +
Sbjct: 369 RRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAK 428

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A ++  EM+  G +       SL+  L      +++ ++ A  +FEK+ ++ +  D   
Sbjct: 429 KAFNLHDEMISKGIQPTLVTYTSLIYVL-----SKRNRMKAADDLFEKIIREGASPDLIM 483

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           +  +I         D A   L    +   +P  +T+N ++Q  C EGK+++A  LL  M 
Sbjct: 484 FNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMK 543

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                P   SY+ LI+   +     DA  +    L  G  P
Sbjct: 544 RRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNP 584



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 181/388 (46%), Gaps = 40/388 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D +K  G       +  L+  +    + E A     +    GL P + T++ +I  YC
Sbjct: 293 VLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYC 352

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           NK D  +A    D M      P V+T+ +L+++L   G++ EA  ++  MG  G  P+  
Sbjct: 353 NKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSI 412

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G C  G  ++A+ +   + + G++P + TYT+++    K  R   A +L  + 
Sbjct: 413 TYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKI 472

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I  G +P+++ FN L +G+C  G   +   LLK M KRN +PD+++Y+TL+ G  + GK+
Sbjct: 473 IREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKV 532

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  + KEM R G   D    N+L+ G     + ++  + DA+ + ++M          
Sbjct: 533 EEARELLKEMKRRGIRPDHISYNTLISG-----YSKRGDINDAFTIRDEM---------- 577

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
                                    + +G  P  +T+N +IQ LC   + D A  LL  M
Sbjct: 578 -------------------------LSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEM 612

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDA 459
                 P  ++Y  LI  + +++ S +A
Sbjct: 613 VSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 171/392 (43%), Gaps = 40/392 (10%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           +S  F ++IR  C      +A +  D M + G  P + TF  +++   K  + +    + 
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV------------- 225
            +M R+  K  + T+N ++  LC  G++++A + + +++N G+KP+V             
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284

Query: 226 ----------------------YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
                                 YTY +++ G CK G+  EA  +L +  E G+ P  VT+
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           NTL +GYC +G  +K  G    M +R  LP   +Y+ L++ L   GK+  A  + K+M  
Sbjct: 345 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD 404

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D    N L+ G C     +K     A+ + ++M  K       TY  +I  L K 
Sbjct: 405 SGIVPDSITYNILINGYCRCGNAKK-----AFNLHDEMISKGIQPTLVTYTSLIYVLSKR 459

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            +   A       I  G  P  I FN +I   C  G +D+A  LL  M +   +P   +Y
Sbjct: 460 NRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTY 519

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           + L+    +  K  +A  L     ++G+ P  
Sbjct: 520 NTLMQGRCREGKVEEARELLKEMKRRGIRPDH 551



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 94/183 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + +K   D+F+ I ++G +  +  FN L+         + A     E     + P+  
Sbjct: 458 KRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEV 517

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +++  C +    EAR+++  M   G  P+  ++  L++   K G + +A  + D+M
Sbjct: 518 TYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEM 577

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             IG  P + TYN L++GLC   + + A E+L  + + G+ PD  TY ++++G  KV  S
Sbjct: 578 LSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDS 637

Query: 242 NEA 244
           +EA
Sbjct: 638 SEA 640


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 199/403 (49%), Gaps = 5/403 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +++  I   G   S+  FN ++  L    + + AV  F++   + L P+++T++ +I  +
Sbjct: 183 NVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGH 242

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A +V D M  +G +PN  T++ L+N LC  GR+ EA+++L++M   G +P +
Sbjct: 243 CRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTV 302

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY   +  LC +GRV++A  ++ ++   G  P V TYTA++ G  + G+   A+ + ++
Sbjct: 303 YTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHK 362

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            ++ G+ PN VT+N L N  C EG     + +   M+    L +  +Y+ ++ GL     
Sbjct: 363 MLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDD 422

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I  A+ +F +M++ G        N+L+     + +     L +A +    M +     D 
Sbjct: 423 IEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGY-----LNNATRFLYMMKESNCEPDE 477

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I    KG K D A    +  ++ G  P   T+  +I   C EGKID AL L   
Sbjct: 478 RTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFER 537

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M E+    S  +Y+ +I+ L +  +  +A        +QG+ P
Sbjct: 538 MEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQP 580



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 221/495 (44%), Gaps = 42/495 (8%)

Query: 1   MSSLVPSNSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDR 60
           +  +  S+S +F  T    +  + Q  K  +  +A    A+       P  L     ++ 
Sbjct: 147 LHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINI 206

Query: 61  I-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           + K   ++E + +F+ I +         +  L++      + + A + F      G  PN
Sbjct: 207 LCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPN 266

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           S T+S +I   CN+    EA  +++ M + G  P V T+T+ ++SLC  GR+ +A+ ++ 
Sbjct: 267 SVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVR 326

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            MG+ GC P++QTY  ++ GL   G++E A  M   +  +GL P+  TY A+++  C  G
Sbjct: 327 SMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEG 386

Query: 240 RSN-----------------------------------EAMELLNEAIERGVTPNVVTFN 264
           R                                     +AM + N+ ++ G +P VVT+N
Sbjct: 387 RFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYN 446

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL     K G        L +MK+ NC PD+ +Y  L++G  K GK+  A S F EM++ 
Sbjct: 447 TLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKC 506

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   ++    +++ G C     ++  ++ A  +FE+M +        TY  +I  L KG 
Sbjct: 507 GISPNQWTYTAMIDGYC-----KEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGN 561

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           +  EA        E G  P TIT+ ++I  LC     + A  +   M +   +P+  +Y 
Sbjct: 562 RFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYT 621

Query: 445 MLITKLDQLEKSYDA 459
            LI  L Q E   DA
Sbjct: 622 SLIYGLCQ-EGKVDA 635



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 174/337 (51%), Gaps = 5/337 (1%)

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A+ V   +F +G  P++ TF  ++N LCK G+++EA+ V +++ +    P+  TY  L+ 
Sbjct: 181 AQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLIL 240

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           G C   ++++A+E+   +  DG  P+  TY+ +++G C  GR  EAM++L E  E+G+ P
Sbjct: 241 GHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEP 300

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
            V T+    +  C  G     + L++ M K+ C P   +Y+ +++GL + GK+  A+ ++
Sbjct: 301 TVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMY 360

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
            +M++ G   +    N+L+  LC +          A ++F+ M    ++ +  TY  +I+
Sbjct: 361 HKMLKEGLVPNTVTYNALINELCTEGR-----FGIALKIFDWMEGHGTLANAQTYNQIIK 415

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L      ++A++  +  ++ G  P  +T+N +I      G ++ A   L++M E    P
Sbjct: 416 GLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEP 475

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
              +Y  LI+   +  K   A + +   LK G+ P +
Sbjct: 476 DERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQ 512



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 186/408 (45%), Gaps = 9/408 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  ++  I ++  + K+G   +   +N L+  L        A+K F     +G   N+ 
Sbjct: 349 RAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQ 408

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+     +D  +A  V + M  +G  P V T+  L+    K G L  A   L  M
Sbjct: 409 TYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMM 468

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C+P+ +TY  L+ G C  G+++ A      +   G+ P+ +TYTA++DG+CK G+ 
Sbjct: 469 KESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKI 528

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ L     E G + ++ T+N + +G  K     +       M ++   P+ I+Y++L
Sbjct: 529 DVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSL 588

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K      A  IF EM +     +     SL+ GLC          E      E++
Sbjct: 589 INGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQ---------EGKVDAAERL 639

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           T+        TY  ++  L +  +++EA   + +  E G  P    + +++ A C   K+
Sbjct: 640 TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKV 699

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           D AL +  LM      P    Y +LI  L  + ++ +A  ++ + LK+
Sbjct: 700 DCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKK 747



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 157/355 (44%), Gaps = 44/355 (12%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           ++A  FF E    G++PN WT++ MI  YC +     A  + + M +NG   ++ T+  +
Sbjct: 494 DSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAI 553

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ L K  R  EA +   +M   G +PN  TY  L+ GLC       A+++   ++    
Sbjct: 554 ISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNC 613

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P+ +TYT+++ G C+ G+ + A  L     E G  P + T++TL +G C+EG   +   
Sbjct: 614 LPNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTYSTLVSGLCREGRSNEASQ 669

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L++ MK++   P    Y +LL    K  K+  A+ IF  M   GF+    +   L+  LC
Sbjct: 670 LVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALC 729

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
             S       E+A  +F+ + KK   +D                                
Sbjct: 730 GVSRA-----EEALNIFQSLLKKQWNSD-------------------------------- 752

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
               I +  ++  L  EG  D  +  L+LM      PS  +Y +L  +L ++ KS
Sbjct: 753 ---LIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKS 804



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/188 (18%), Positives = 81/188 (43%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           A  +   I     + ++D  + + ++G   ++  ++ L+  L        A +       
Sbjct: 617 AHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKE 676

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
            GL+P+   +  ++  +C       A ++ + M   G+ P++  + +L+ +LC   R +E
Sbjct: 677 KGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEE 736

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           AL +   + +     ++  +  L+ GL   G  +   + L  +++    P ++TY  +  
Sbjct: 737 ALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILAR 796

Query: 234 GFCKVGRS 241
              KVG+S
Sbjct: 797 ELSKVGKS 804



 Score = 38.5 bits (88), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 7/129 (5%)

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRT-------LGKGKKTDEALIHLHHAIEMGHIPR 404
           ED  +        +S +D G +G  + +       LGK      A          G  P 
Sbjct: 137 EDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPS 196

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            +TFN +I  LC +GK+ +A+L+   +++    P   +Y  LI    +  K   A  ++ 
Sbjct: 197 LLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFD 256

Query: 465 AALKQGVIP 473
             +K G  P
Sbjct: 257 RMVKDGCNP 265


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 204/454 (44%), Gaps = 68/454 (14%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+S   + + + D ++  G   ++  +N ++  +   +  + A +  +  SSYG  P++ 
Sbjct: 184 KSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTV 243

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +++  C    + +   +   M +N   PN  TF +LV   C+ G ++ A+EVLD+M
Sbjct: 244 SYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRM 303

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  N    N ++  +C  GRV++A+E L N+ + G  PD  +YT V+ G C+ GR 
Sbjct: 304 SEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRW 363

Query: 242 NEAMELLNEAIERGVTPNVVTFNT-----------------------------------L 266
            +A ELLNE + +   PN VTFNT                                   L
Sbjct: 364 EDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNAL 423

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            NG+C +G   +    L+L     C P+ I+Y+TLL GL    ++  A  +  EM++   
Sbjct: 424 VNGFCVQG---RVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDC 480

Query: 327 EVDERMMNSLLRGLCMKSWEEKDL------------------------------LEDAYQ 356
            ++    N L+   C K + E+ +                               E+A +
Sbjct: 481 PLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALE 540

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +   +  K    D  TY  ++  L +  + +EA+   H   +MG  P+ + +N ++ ALC
Sbjct: 541 LLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALC 600

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              + D+A+     M  ++ +P+ ++Y +LI  L
Sbjct: 601 KRCETDRAIDFFAHMVSNSCMPNESTYVILIEGL 634



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 194/403 (48%), Gaps = 14/403 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +  + +  G    V  +N L+         + A +  +   S  + P+++T++ +IR  C
Sbjct: 92  VLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIA---SMPVPPDAYTYTPLIRGLC 148

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           ++    +A  ++D M      P+V T+T+L+ ++CKS    +A++VLD+M   GC PNI 
Sbjct: 149 DRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIV 208

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN ++ G+C   RV++A ++L  + + G +PD  +YT V+ G C   R  +   L  E 
Sbjct: 209 TYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEM 268

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +E    PN VTF+ L   +C+ G   + + +L  M +  C  +    + ++N + K G++
Sbjct: 269 VENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRV 328

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDP 370
             A      M  +G   D     ++L+GLC    W      EDA ++  +M +K    + 
Sbjct: 329 DDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRW------EDAKELLNEMVRKNCPPNE 382

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            T+   I  L +    D+A++ +    E G     +T+N ++   C +G++D AL L   
Sbjct: 383 VTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNS 442

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +      P+  +Y  L+T L   E+  DA A   A + Q   P
Sbjct: 443 LPCE---PNTITYTTLLTGLCHAER-LDAAAELLAEMMQNDCP 481



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 170/342 (49%), Gaps = 10/342 (2%)

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           ++D  EA ++++     G  P+V   T L+ +LC+ GR  +A  VL      G   ++  
Sbjct: 48  RDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFA 107

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN L+ G C  GR++ A  ++ ++    + PD YTYT ++ G C  GR  +A+ LL++ +
Sbjct: 108 YNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDML 164

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
            R   P+VVT+  L    CK     + + +L  M+ + C P+ ++Y+ ++NG+ +  ++ 
Sbjct: 165 RRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVD 224

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
            A  I   +  +GF+ D     ++L+GLC  K WE+ ++L      F +M +   V +  
Sbjct: 225 DARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVL------FCEMVENNCVPNEV 278

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           T+ +++R   +G   + A+  L    E G    T   N VI ++C +G++D A   L  M
Sbjct: 279 TFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM 338

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +   P   SY  ++  L +  +  DA  L    +++   P
Sbjct: 339 GSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPP 380



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 174/361 (48%), Gaps = 8/361 (2%)

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           L  L+  ++   A +    ++S G AP+ +  + +IR  C +    +A +V+     +G 
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
             +V  +  LV   C+ GRL  A  ++  M      P+  TY  L++GLC  GRV +A  
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALS 158

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +L ++     +P V TYT +++  CK     +AM++L+E   +G TPN+VT+N + NG C
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC 218

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           +E        +L  +      PD +SY+T+L GL    +      +F EMV      +E 
Sbjct: 219 REDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEV 278

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             + L+R  C        ++E A +V ++M++     +     IVI ++ K  + D+A  
Sbjct: 279 TFDMLVRFFC-----RGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFE 333

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            L++    G  P TI++  V++ LC  G+ + A  LL  M      P+  +++  I  L 
Sbjct: 334 FLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILC 393

Query: 452 Q 452
           Q
Sbjct: 394 Q 394



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 196/402 (48%), Gaps = 8/402 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + D + +     SV  +  LL A+   +    A+K   E  + G  PN  T++++I  
Sbjct: 157 LSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIING 216

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C ++   +AR++++ +   G+ P+  ++T ++  LC + R ++   +  +M    C PN
Sbjct: 217 MCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPN 276

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             T++ L++  C  G VE A E+L  +   G   +      V++  CK GR ++A E LN
Sbjct: 277 EVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLN 336

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
                G +P+ +++ T+  G C+ G       LL  M ++NC P++++++T +  L + G
Sbjct: 337 NMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKG 396

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            I  A+ + ++M  +G  V     N+L+ G C++       ++ A ++F  +  + +   
Sbjct: 397 LIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGR-----VDSALELFNSLPCEPNTI- 450

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  ++  L   ++ D A   L   ++       +TFN ++   C +G +++A+ L+ 
Sbjct: 451 --TYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQ 508

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
            M EH   P+  +++ L+  + +   S +A  L    + +G+
Sbjct: 509 QMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGI 550



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 172/376 (45%), Gaps = 43/376 (11%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++  I++ D + + G   + +  N ++ ++      + A +F +   SYG +P++ +++ 
Sbjct: 293 VERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTT 352

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C    + +A+++++ M      PN  TF   +  LC+ G + +A+ +++QM   G
Sbjct: 353 VLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYG 412

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG----------- 234
           C   I TYN L+ G C  GRV+ A E+  ++     +P+  TYT ++ G           
Sbjct: 413 CSVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAA 469

Query: 235 ------------------------FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
                                   FC+ G   EA+EL+ + +E G TPN++TFNTL +G 
Sbjct: 470 ELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGI 529

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
            ++    + + LL  +  +    D I+YS++++ L +  +I  AV +F  +   G     
Sbjct: 530 TEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKA 589

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
            M N +L  LC +   ++     A   F  M     + +  TY I+I  L +     EA 
Sbjct: 590 VMYNKILSALCKRCETDR-----AIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEAR 644

Query: 391 IHLHHAIEMGHIPRTI 406
             L      G + +++
Sbjct: 645 YVLSELCSRGVLSKSL 660


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 191/389 (49%), Gaps = 41/389 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    ++ +++ D ++ +G   +   +N ++ A+    + + A +  +   S G  PN+ 
Sbjct: 210 KGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTV 269

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +++ +C+   + +A +++D M      PN  T  +++N+LC+ G L++    L++M
Sbjct: 270 NYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKM 329

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC  N+ TYN ++ G+C  G V+ A E+L N+++ G KPD+ TY  V+ G C   R 
Sbjct: 330 SKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRW 389

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A EL+ +  +    P+  TFNT+ + +C++G  ++   + K M ++ C P+  +YST+
Sbjct: 390 EDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTI 449

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL K GK+  A+ +  EM   GF  D+                               
Sbjct: 450 IGGLTKAGKMEQALELLNEMANKGFNTDK------------------------------- 478

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                      Y ++  +L K  K +E +  +H   + G  P+T+ +N V+  LC  GK 
Sbjct: 479 ----------MYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKT 528

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           D A+ +L  M     +P  ++Y +LI  L
Sbjct: 529 DYAIDVLADMVSCGCMPDESTYIILIEGL 557



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 167/357 (46%), Gaps = 11/357 (3%)

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           L AL+   + + A++    +      P+    + ++R  C +    +A +V++     G 
Sbjct: 71  LSALIHRGDLDAALRLVGSSPR---PPDVPLANRLVRDLCRRGRPADAARVVEAC---GP 124

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
                T+  LV+  C++G L++A  V+  M       +   +N L+  LC  GRV +A  
Sbjct: 125 EATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALV 184

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +L  +   G  PDV TY  ++   CK     +A+EL++     G  PN VT+N + +  C
Sbjct: 185 VLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMC 244

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           +EG   +   LL  +  R C P+ ++Y+T+L G     +   A  I  EMVR     +E 
Sbjct: 245 REGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEA 304

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
            +N ++  LC      K LL+      EKM+K     +  TY  VI  + +    D AL 
Sbjct: 305 TLNVIINTLC-----RKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALE 359

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
            L +    G  P  +T+N V++ LC   + + A  L+  M ++ ++P  ++++ +I+
Sbjct: 360 LLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIIS 416



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 127/249 (51%), Gaps = 1/249 (0%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
            + + K G   +V  +N ++  +      ++A++  S   S+G  P+  T++ +++  C+
Sbjct: 326 LEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCS 385

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
            + + +A +++  M  N   P+ +TF  +++  C+ G + +A EV  QM   GC PN  T
Sbjct: 386 ADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTT 445

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y+ ++ GL   G++E+A E+L  + N G   D   Y  + +   K  +  E ++++++  
Sbjct: 446 YSTIIGGLTKAGKMEQALELLNEMANKGFNTD-KMYRVLTESLNKEDKIEEVVQVVHKLQ 504

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           + G++P  V +NT+  G C+ G     + +L  M    C+PD+ +Y  L+ GL   G  +
Sbjct: 505 DSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSK 564

Query: 313 PAVSIFKEM 321
            A  +   +
Sbjct: 565 EARELLSRL 573



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 117/227 (51%), Gaps = 1/227 (0%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++  +++  G    +  +N +L  L   +  E A +   + S     P++ TF+ +I  
Sbjct: 358 LELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISF 417

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C K    +A +V   M + G +PN TT++ ++  L K+G++++ALE+L++M   G   +
Sbjct: 418 WCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD 477

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
            + Y  L + L    ++EE  +++  +++ G+ P    Y  V+ G C+ G+++ A+++L 
Sbjct: 478 -KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLA 536

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + +  G  P+  T+  L  G   EG   +   LL  +  R+ L + +
Sbjct: 537 DMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSL 583


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 205/402 (50%), Gaps = 10/402 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +    ++ + +F  I + G   +V  +N LL AL+  N+ +     ++     GL PN +
Sbjct: 121 RVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVF 180

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+++  C  +    A K+   M + G  P+  T+T +V+SLCK+G++ +A E+    
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL---A 237

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           GR   KP++  YN L+ G+C  GR+E A ++L  + ++G+ P+V +Y+ +++  C  G  
Sbjct: 238 GRF--KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNV 295

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A  L  +   RG   N+ TF  L  G    G   + + L KLM +  C P+ ++Y+TL
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL 355

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL   G +  A+ +  +M R G   +    + L+ G      +  DL+  A + + +M
Sbjct: 356 IHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFA----KSGDLV-GASETWNRM 410

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  +  TY  ++  L K    D+A   +      G  P TITFN  I+ LCG G++
Sbjct: 411 ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRV 470

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           + A+ LL  M  H  +P+ T+Y+ L+  L ++ K  +A  L+
Sbjct: 471 EWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLF 512



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 205/469 (43%), Gaps = 73/469 (15%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++ ++KKDG   +V  +N LL AL   +  + A K F E S+ G  P++ T++ M+   C
Sbjct: 166 LYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLC 225

Query: 132 NKNDFFEAR------------------------------KVIDCMFDNGYHPNVTTFTIL 161
                 +AR                              K++  M DNG  PNV +++ +
Sbjct: 226 KAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCI 285

Query: 162 VNSLCKSG-----------------------------------RLKEALEVLDQMGRIGC 186
           +NSLC SG                                   +L EAL++   M + GC
Sbjct: 286 INSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC 345

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +PN+  YN L+ GLC  G +EEA ++   ++  G  P+V TY+ ++DGF K G    A E
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASE 405

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
             N  I  G  PNVVT+  + +  CK     +   L++ M    C P+ I+++T + GL 
Sbjct: 406 TWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLC 465

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKV 365
             G++  A+ + + M   G   +    N LL  L  M  +EE      A+ +F+++  + 
Sbjct: 466 GNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEE------AFGLFQEIEARN 519

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY  V+    +     EAL     A+  G  P +IT+N +I A C +GK+  A 
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAA 579

Query: 426 LLLFLMYEHAKI-PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L+  +    +  P   +Y  LI          +A A    A+ QG+ P
Sbjct: 580 QLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 196/417 (47%), Gaps = 9/417 (2%)

Query: 34  AASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLL 92
           A  +  A  L  +  P        +D + K   ++  I +   +  +G + +V  ++ ++
Sbjct: 227 AGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCII 286

Query: 93  MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
            +L +    E A   F++    G   N  TF+ +I+    +   +EA  +   M  +G  
Sbjct: 287 NSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE 346

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           PNV  +  L++ LC +G L+EAL+V DQM R GC PN+ TY+ L+ G    G +  A E 
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASET 406

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              + + G +P+V TYT ++D  CK    ++A  L+ +    G TPN +TFNT   G C 
Sbjct: 407 WNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCG 466

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     + LL+ M+   CLP+  +Y+ LL+ L +  K   A  +F+E+     + +   
Sbjct: 467 NGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVT 526

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA--L 390
            N++L G     +    ++ +A Q+F K   + +  D  TY  +I    K  K   A  L
Sbjct: 527 YNTVLYG-----FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL 581

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +    +++  H P  IT+ ++I   C    I++A+  L         P+  +++ L+
Sbjct: 582 VERVSSMKEWH-PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 148/274 (54%), Gaps = 1/274 (0%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E + + D +++ G   +V+ ++ L+       +   A + ++   S+G  PN  T++ 
Sbjct: 365 LEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTC 424

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           M+   C  + F +A  +++ M   G  PN  TF   +  LC +GR++ A+++L++M   G
Sbjct: 425 MVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHG 484

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PNI TYN LL  L  + + EEA+ +   ++   L+P++ TY  V+ GF + G   EA+
Sbjct: 485 CLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEAL 544

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNG 304
           +L  +A+ RG  P+ +T+NT+ + YCK+G       L+ ++   +   PD I+Y++L+ G
Sbjct: 545 QLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWG 604

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              W  I  A++   + +  G   +    N+L+R
Sbjct: 605 ACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 93/187 (49%), Gaps = 1/187 (0%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + + ++  G   +++ +N+LL AL  +N+ E A   F E  +  L PN  T++ ++  
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG-CKP 188
           +       EA ++       G  P+  T+  ++++ CK G++K A ++++++  +    P
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHP 593

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           +I TY  L+ G C    +EEA   L    N G+ P+  T+ A++  F         + +L
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHIL 653

Query: 249 NEAIERG 255
           ++ + +G
Sbjct: 654 DDILRKG 660


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 187/356 (52%), Gaps = 5/356 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P++ T +  I+ +C K    +A    D +   G+H +  ++  L+N LCK G  K A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           LE+L +      +P++  YN ++ G+C    V +A+++     +  + PDV+TY A++ G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           FC VG+  +A++L N+   + + P+V TF+ L +G+CK+G   +   +L +M K++  PD
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++YS+L++G     ++  A SIF  M   G   + +  N ++ G C     +  ++++A
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFC-----KIKMVDEA 492

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++F++M  K    D  TY  +I  L K  +   AL  +      G  P  IT+N+++ A
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           LC +  +DKA+ LL  +      P   +Y +L+  L Q  K  DA  ++   L +G
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 169/305 (55%), Gaps = 5/305 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+    ++ + + A+  F++ +S  + P+ +TFSI++  +C   +  EA+ V+ 
Sbjct: 368 VFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLA 427

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M      P+V T++ L++  C    + +A  + + M   G   N+Q+YN ++ G C + 
Sbjct: 428 MMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIK 487

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            V+EA ++   + +  + PDV TY++++DG CK GR + A+EL++E   RG  P+++T+N
Sbjct: 488 MVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYN 547

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           ++ +  CK+    K + LL  +K +   PD  +Y+ L+ GL + GK+  A  +F++++  
Sbjct: 548 SILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVK 607

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G+ +D      +++G C     +K L ++A  +  KM +   + D  TY I+I +L +  
Sbjct: 608 GYNLDVYAYTVMIQGFC-----DKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKD 662

Query: 385 KTDEA 389
           + D A
Sbjct: 663 ENDMA 667



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 195/390 (50%), Gaps = 15/390 (3%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + +   D +   G +     +  L+  L  + E + A++         + P+   ++ 
Sbjct: 279 IHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNT 338

Query: 126 MIRCYC---NKNDFFE--ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +I   C   + ND F+  + KV   +F     P+V T+  L++  C  G+LK+A+++ ++
Sbjct: 339 IIDGMCKDKHVNDAFDLYSEKVSKRIF-----PDVFTYNALISGFCIVGKLKDAIDLFNK 393

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M      P++ T++ L+ G C  G ++EA  +L  +    +KPDV TY+++MDG+C V  
Sbjct: 394 MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNE 453

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            N+A  + N    RGVT NV ++N + NG+CK     + + L K M  +   PD I+YS+
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL K G+I  A+ +  EM   G + D    NS+L  LC K   +K     A  +  K
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDK-----AITLLTK 568

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           +  +    D  TY I+++ L +  K ++A       +  G+      +  +IQ  C +G 
Sbjct: 569 LKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGL 628

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            D+AL LL  M E+  IP   +Y+++I  L
Sbjct: 629 FDEALALLSKMEENGCIPDAKTYEIIILSL 658



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 150/287 (52%), Gaps = 7/287 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE  ++   + K      V  ++ L+    ++NE   A   F+  S  G+  N  
Sbjct: 415 KDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQ 474

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++IMI  +C      EA K+   M      P+V T++ L++ LCKSGR+  ALE++D+M
Sbjct: 475 SYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEM 534

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P+I TYN +L  LC    V++A  +L  +K  G++PD+ TYT ++ G C+ G+ 
Sbjct: 535 HYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKL 594

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A ++  + + +G   +V  +  +  G+C +G   + + LL  M++  C+PD  +Y  +
Sbjct: 595 EDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEII 654

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEV---DERMMNSLLRGLCMKSW 345
           +  L +  +   A  + +EM+  G  V   D+ + + L+R    ++W
Sbjct: 655 ILSLFEKDENDMAEKLLREMIMRGLLVALTDDLVASILVR----RTW 697



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 130/285 (45%), Gaps = 6/285 (2%)

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLM-NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           I+ +   +K  C +   E + E     +  +G +PD  T T  + GFC  G+ ++A+   
Sbjct: 227 IEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFH 286

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           ++ I  G   + V++ TL NG CK G     + LL+    +   PD + Y+T+++G+ K 
Sbjct: 287 DKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKD 346

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
             +  A  ++ E V      D    N+L+ G C+        L+DA  +F KMT K  + 
Sbjct: 347 KHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGK-----LKDAIDLFNKMTSKNIIP 401

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  T+ I++    K     EA   L   ++    P  +T+++++   C   +++KA  + 
Sbjct: 402 DVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIF 461

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M       +  SY+++I    +++   +A  L+     + + P
Sbjct: 462 NTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFP 506


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 205/405 (50%), Gaps = 10/405 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +F  ++  G    +  +N ++  L   +    A+    +   +G  P+  T S +I  
Sbjct: 30  ISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 89

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C  N  F+A  ++  M + G+ P+V  +  +++  CK G + +A+E+ D+M R G + +
Sbjct: 90  FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 149

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L+ GLC  GR  +A  ++ ++    + P+V T+TAV+D F K G+ +EAM+L  
Sbjct: 150 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 209

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E   R V P+V T+N+L NG C  G   +   +L LM  + CLPD ++Y+TL+NG  K  
Sbjct: 210 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 269

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++     +F+EM + G   D    N++++G     + +    + A ++F +M  + ++  
Sbjct: 270 RVDEGTKLFREMAQRGLVGDTITYNTIIQG-----YFQAGRPDAAQEIFSRMDSRPNIR- 323

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKALLLL 428
             TY I++  L    + ++AL+ L   ++   I   I T+N VI  +C  G ++ A  L 
Sbjct: 324 --TYSILLYGLCMNWRVEKALV-LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 380

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +      P   SY  +I+   +  +   +  LY    + G++P
Sbjct: 381 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 200/390 (51%), Gaps = 8/390 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ DF+ +L  +      +  +  F      G+  + ++++I+I C C  + F  A  V+
Sbjct: 9   SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 68

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   GY P+V T + L+N  C+  R+ +A++++ +M  +G +P++  YN ++ G C +
Sbjct: 69  GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 128

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G V +A E+   ++ DG++ D  TY +++ G C  GR ++A  L+ + + R + PNV+TF
Sbjct: 129 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 188

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             + + + KEG   + + L + M +R   PD  +Y++L+NGL   G++  A  +   MV 
Sbjct: 189 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 248

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D    N+L+ G C     +   +++  ++F +M ++  V D  TY  +I+   + 
Sbjct: 249 KGCLPDVVTYNTLINGFC-----KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 303

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + D A         M   P   T++ ++  LC   +++KAL+L   M +       T+Y
Sbjct: 304 GRPDAAQEIFSR---MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 360

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +++I  + ++    DA  L+ +   +G+ P
Sbjct: 361 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 390



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 169/336 (50%), Gaps = 8/336 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + ID+   +++ G    V  +N ++     +     AV+ F      G+  ++ T++ ++
Sbjct: 98  DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 157

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C    + +A +++  M      PNV TFT +++   K G+  EA+++ ++M R    
Sbjct: 158 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 217

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++ TYN L+ GLC  GRV+EA +ML  +   G  PDV TY  +++GFCK  R +E  +L
Sbjct: 218 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 277

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E  +RG+  + +T+NT+  GY + G P     +   M  R   P+  +YS LL GL  
Sbjct: 278 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCM 334

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
             ++  A+ +F+ M +   E+D    N ++ G+C     +   +EDA+ +F  ++ K   
Sbjct: 335 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMC-----KIGNVEDAWDLFRSLSCKGLK 389

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
            D  +Y  +I    + ++ D++ +      E G +P
Sbjct: 390 PDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 143/291 (49%), Gaps = 4/291 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + +++FD +++DG       +N L+  L        A +   +     + PN  
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +  +  F EA K+ + M      P+V T+  L+N LC  GR+ EA ++LD M
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 246

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P++ TYN L+ G C   RV+E  ++   +   GL  D  TY  ++ G+ + GR 
Sbjct: 247 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 306

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A E+ +    R   PN+ T++ L  G C      K + L + M+K     D  +Y+ +
Sbjct: 307 DAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 363

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKDLL 351
           ++G+ K G +  A  +F+ +   G + D     +++ G C K  W++ DLL
Sbjct: 364 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLL 414



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 140/307 (45%), Gaps = 40/307 (13%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  F+ +++ + KS      + +   M   G   ++ +YN ++  LC   R   A  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           +  +   G +PDV T +++++GFC+  R  +A++L+++  E G  P+VV +NT+ +G CK
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL--------------------------- 305
            G     V L   M++     D ++Y++L+ GL                           
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 306 --------LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
                   +K GK   A+ +++EM R   + D    NSL+ GLCM        +++A Q+
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG-----RVDEAKQM 242

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            + M  K  + D  TY  +I    K K+ DE         + G +  TIT+N +IQ    
Sbjct: 243 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 302

Query: 418 EGKIDKA 424
            G+ D A
Sbjct: 303 AGRPDAA 309



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 114/233 (48%), Gaps = 3/233 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K     E + +++ + +   +  V  +N L+  L M    + A +      + G  P+ 
Sbjct: 196 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 255

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I  +C      E  K+   M   G   +  T+  ++    ++GR   A E+  +
Sbjct: 256 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 315

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M     +PNI+TY+ LL GLC   RVE+A  +  N++   ++ D+ TY  V+ G CK+G 
Sbjct: 316 MDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 372

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             +A +L      +G+ P+VV++ T+ +G+C++    K   L + M++   LP
Sbjct: 373 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 71/182 (39%), Gaps = 5/182 (2%)

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
           LP  + +S +L+ + K       +S+F  M   G   D    N ++  LC  S       
Sbjct: 7   LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS-----RF 61

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
             A  V  KM K     D  T   +I    +G +  +A+  +    EMG  P  + +N +
Sbjct: 62  VIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTI 121

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I   C  G ++ A+ L   M          +Y+ L+  L    +  DA  L    + + +
Sbjct: 122 IDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 181

Query: 472 IP 473
           +P
Sbjct: 182 VP 183


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 200/416 (48%), Gaps = 18/416 (4%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +++ + K   N  V  +  L+  L    + + A+  F E +  G+ PN   +SI++   C
Sbjct: 185 VYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLC 244

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                F+A+++   M  +G + ++ T+ +L+N  CKSG L +A  +L  + + G    + 
Sbjct: 245 QAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVI 304

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            Y CL+ GL    R EEA+     +  + +KPDV  YT ++ G  + GR  EA+ LL E 
Sbjct: 305 GYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEM 364

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            ERG+ P+ + +N L  G+C  G   +   L   + K +C P+  +YS L+ G+ K G I
Sbjct: 365 TERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLI 424

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM--TKKVS--- 366
             A  IFKEM + G        NSL+ GLC     + + LE+A  +F +M   +K S   
Sbjct: 425 NKAQHIFKEMEKLGCLPSVVTFNSLINGLC-----KANRLEEARLLFYQMEIVRKPSLFL 479

Query: 367 --------VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
                   V D  +  +++  L +     +A   L   ++ G +P   T+N +I   C  
Sbjct: 480 RLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKF 539

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           G I+ A  L   M     +P   +Y  LI  L +  ++ DA  ++   +K+G +P+
Sbjct: 540 GNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPE 595



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 199/415 (47%), Gaps = 15/415 (3%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R++Q       IK +  +    +   +K      S   F+ L+ A       E AV+ FS
Sbjct: 93  RTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFS 152

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
               +   P+ + F++++     K  F  A  V + M     +P+V T+ IL++ LCK+ 
Sbjct: 153 LMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTC 212

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           + ++AL + D+M   G  PN   Y+ +L GLC   ++ +A  +   ++  G   D+ TY 
Sbjct: 213 KTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYN 272

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++GFCK G  ++A  LL    + G    V+ +  L NG  +     +     + M + 
Sbjct: 273 VLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRE 332

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
           N  PD + Y+ ++ GL + G++  A+++  EM   G   D    N+L++G C     +  
Sbjct: 333 NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFC-----DMG 387

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE-MGHIPRTITF 408
            L++A  +  +++K     +  TY I+I  + K    ++A  H+   +E +G +P  +TF
Sbjct: 388 YLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQ-HIFKEMEKLGCLPSVVTF 446

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ-LEKSYDACAL 462
           N++I  LC   ++++A LL + M E  + PS      L  +L Q  +K +D  +L
Sbjct: 447 NSLINGLCKANRLEEARLLFYQM-EIVRKPS------LFLRLSQGTDKVFDIASL 494



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 157/337 (46%), Gaps = 58/337 (17%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+    E +  GL P++  ++ +I+ +C+     EA  +   +  +   PN  T++IL+ 
Sbjct: 357 ALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILIC 416

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA-------------- 209
            +CK+G + +A  +  +M ++GC P++ T+N L+ GLC   R+EEA              
Sbjct: 417 GMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPS 476

Query: 210 ----------------------------------YEMLMNVKNDGLKPDVYTYTAVMDGF 235
                                             Y++LM + + G+ PD+ TY  +++GF
Sbjct: 477 LFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGF 536

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK G  N A +L  E   +G  P+ VT+ TL +G  + G     + + + M K+ C+P+ 
Sbjct: 537 CKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPES 596

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVR--FGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
            +Y T++    +   I  A+S++ + +R   G+E DE++       +  +S++ ++ L+ 
Sbjct: 597 STYKTIMTWSCRENNISLALSVWMKYLRDFRGWE-DEKVR------VVAESFDNEE-LQT 648

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
           A +   +M  K    D   Y I +  L + K+  EA 
Sbjct: 649 AIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAF 685



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 125/307 (40%), Gaps = 65/307 (21%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI-------------------D 144
           A   F E    G  P+  TF+ +I   C  N   EAR +                    D
Sbjct: 427 AQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTD 486

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +FD      + +  +++  LC+SG + +A ++L Q+   G  P+I+TYN L+ G C  G
Sbjct: 487 KVFD------IASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFG 540

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            +  A+++   ++  G  PD  TY  ++DG  + GR+ +A+E+  + +++G  P   T+ 
Sbjct: 541 NINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYK 600

Query: 265 TLFNGYCKEGTPMKGVG-----------------------------------LLKL-MKK 288
           T+    C+E      +                                    LL++ +K 
Sbjct: 601 TIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKS 660

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           +N   D   Y+  L GL++  +   A +IF  +  F   +       L+  LCM   E  
Sbjct: 661 KNF--DLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMV--ENL 716

Query: 349 DLLEDAY 355
           D+  D +
Sbjct: 717 DMAMDVF 723



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 58/129 (44%)

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
           ++++ E  + E A + F  M       D   + +++  L + +    AL   +  ++   
Sbjct: 135 IEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNL 194

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P  +T+  +I  LC   K   AL+L   M +   +P++  Y ++++ L Q +K +DA  
Sbjct: 195 NPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQR 254

Query: 462 LYGAALKQG 470
           L+      G
Sbjct: 255 LFSKMRASG 263


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 194/407 (47%), Gaps = 5/407 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +   D +   G       +  LL  L  + E   AVK           PN   ++ 
Sbjct: 96  VKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNT 155

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G  P+  T+T L+   C  G+L  A  +LD+M    
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKN 215

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P +  YN L+  LC  G V+EA  +L  +  +G+KP V TY+ +MDG+C VG    A 
Sbjct: 216 INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAK 275

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +  ++ GV PNV ++N + NG CK     + + LL+ M  +N +PD ++Y++L++GL
Sbjct: 276 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 335

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I  A+++  EM   G   D     SLL  LC     +   L+ A  +F KM ++ 
Sbjct: 336 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALC-----KNQNLDKATALFMKMKERG 390

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
                 TY  +I  L KG +   A     H +  G      T+  +I  LC EG  D+AL
Sbjct: 391 IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL 450

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            +   M ++  IP+  +++++I  L + +++  A  L    + +G++
Sbjct: 451 AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 193/389 (49%), Gaps = 5/389 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           + +FN +L +L  + +  TA+    +    G+  N  T +I+I C+C+      +  V+ 
Sbjct: 10  IIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLG 69

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY P+  T   L+  LC  G +K++L   D++   G + +  +Y  LL GLC +G
Sbjct: 70  KILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIG 129

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A ++L  +++   +P+V  Y  ++DG CK    NEA +L +E   RG+ P+ +T+ 
Sbjct: 130 ETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYT 189

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL  G+C  G  M    LL  M  +N  P    Y+ L+N L K G ++ A ++   M + 
Sbjct: 190 TLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKE 249

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G +      ++L+ G C+        +++A Q+F  M +     +  +Y I+I  L K K
Sbjct: 250 GIKPGVVTYSTLMDGYCLVGE-----VQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCK 304

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + DEA+  L   +    +P T+T+N++I  LC  G+I  AL L+  M+   +     +Y 
Sbjct: 305 RVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 364

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            L+  L + +    A AL+    ++G+ P
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQP 393



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 136/267 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE  ++   + K+G    V  ++ L+    ++ E + A + F      G+ PN +
Sbjct: 232 KEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVY 291

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++IMI   C      EA  ++  M      P+  T+  L++ LCKSGR+  AL ++++M
Sbjct: 292 SYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM 351

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   ++ TY  LL  LC    +++A  + M +K  G++P +YTYTA++DG CK GR 
Sbjct: 352 HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRL 411

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A EL    + +G   +V T+  + +G CKEG   + + +   M+   C+P+ +++  +
Sbjct: 412 KNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEII 471

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           +  L +  +   A  +  EM+  G  V
Sbjct: 472 IRSLFEKDENDKAEKLLHEMIAKGLLV 498



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 154/325 (47%), Gaps = 9/325 (2%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + P +  F  ++ SL K  +   A+ +  QM   G + N  T N L+   C++G++  ++
Sbjct: 6   HTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSF 65

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L  +   G +PD  T   +M G C  G   +++   ++ + +G   + V++ TL NG 
Sbjct: 66  SVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGL 125

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G     V LL++++ R+  P+ + Y+T+++GL K   +  A  ++ EM   G   D 
Sbjct: 126 CKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDA 185

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGKGKKTDE 388
               +L+ G C+        L  A+ + ++M  K    +PG   Y I+I  L K     E
Sbjct: 186 ITYTTLIYGFCLLGQ-----LMGAFSLLDEMILK--NINPGVYIYNILINALCKEGNVKE 238

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   L    + G  P  +T++ ++   C  G++  A  +   M +    P+  SY+++I 
Sbjct: 239 AKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMIN 298

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L + ++  +A  L    L + ++P
Sbjct: 299 GLCKCKRVDEAMNLLREMLHKNMVP 323


>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 566

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 181/345 (52%), Gaps = 8/345 (2%)

Query: 109 SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCK 167
           S+AS +G +  ++ ++ ++  +       +A  + +     G Y P+V +F +++  +CK
Sbjct: 187 SKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCK 246

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL-KPDVY 226
            G +++ALE++++M   GC P+  T+N L+ GLC    V +  E+L  ++ DG+  P+V 
Sbjct: 247 VGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVV 306

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYT+V+ G+CK GR  +AM + N+ +  G +PNVVT+N L NGY K G     V + + M
Sbjct: 307 TYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQM 366

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
             R CLPD +++S+L++G  + G++  A+ I+ EM ++  + +      ++   C     
Sbjct: 367 ILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFC----- 421

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPG-TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
           +++   +A    +KM  +  +      Y  VI  L KG K DEA + L    E G  P  
Sbjct: 422 KQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDK 481

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            T+  +I   C +G+I +A+     M E    P     +  I+ L
Sbjct: 482 YTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCL 526



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 156/356 (43%), Gaps = 43/356 (12%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD-NGYHPNVTTFTILVNSL 165
             S  S   + P++ ++  +I   C      +A ++ D M D +GY PN    + L  S 
Sbjct: 114 LHSPHSQLAMPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSC 173

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL-KPD 224
             +G L  A  +L +  + GC      YN L+      GRV++A  +       G+  PD
Sbjct: 174 AAAGLLDAAAALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPD 233

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V+++  V+ G CKVG   +A+EL+    E G +P+ VT N L NG C+     KG  +L+
Sbjct: 234 VWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLR 293

Query: 285 LMKKRN-CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            +++   C+P+ ++Y+++++G  K G+                                 
Sbjct: 294 RLQRDGVCMPNVVTYTSVISGYCKAGR--------------------------------- 320

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                  +EDA  V+  M    +  +  TY ++I   GK      A+      I    +P
Sbjct: 321 -------MEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLP 373

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
             +TF+++I   C  G++D A+ +   M ++   P+  ++ ++I    +  +S +A
Sbjct: 374 DVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEA 429



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 4/251 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +A  + +  ++   +++DG    +V  +  ++         E A+  +++  + G +PN 
Sbjct: 281 RAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNV 340

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++++I  Y    +   A  V   M      P+V TF+ L++  C+ G+L +A+++  +
Sbjct: 341 VTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTE 400

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML--MNVKNDGLKPDVYTYTAVMDGFCKV 238
           M +   +PN  T+  ++   C   R  EA   L  MN++ D + P  + Y  V+D  CK 
Sbjct: 401 MAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTD-IAPQAFIYNPVIDVLCKG 459

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G+ +EA  +L E  E+G  P+  T+  L  G+C +G   + V     M +  C PD I  
Sbjct: 460 GKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVV 519

Query: 299 STLLNGLLKWG 309
           ++ ++ LLK G
Sbjct: 520 NSFISCLLKSG 530



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 1/216 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++ + +++ +   GT+ +V  +N L+          +AV  + +       P+  
Sbjct: 317 KAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVV 376

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS +I  YC      +A K+   M      PN  TF I++++ CK  R  EAL  L +M
Sbjct: 377 TFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKM 436

Query: 182 G-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             R    P    YN ++  LC  G+V+EA  +L+ ++  G +PD YTYT ++ G C  GR
Sbjct: 437 NMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGR 496

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
             EA+   ++ +E G +P+ +  N+  +   K G P
Sbjct: 497 IAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMP 532



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 1/168 (0%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  F+ L+       + + A+K ++E + Y + PN+ TF I+I  +C +N   EA   + 
Sbjct: 375 VVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLK 434

Query: 145 CM-FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
            M       P    +  +++ LCK G++ EA  +L +M   GC+P+  TY  L+ G C  
Sbjct: 435 KMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMK 494

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           GR+ EA      +   G  PD     + +    K G   E   ++  A
Sbjct: 495 GRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPGEVDHIMRIA 542


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 161/305 (52%), Gaps = 5/305 (1%)

Query: 85   VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
            V  +  ++     + +   A K F E    GL P+  TF+ ++  YC      +A +V +
Sbjct: 809  VLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHN 868

Query: 145  CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
             M   G  PNV T+T L++ LCK G L  A E+L +M +IG +PNI TYN ++ GLC  G
Sbjct: 869  HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 928

Query: 205  RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
             +EEA +++   +  GL  D  TYT +MD +CK G  ++A E+L E + +G+ P +VTFN
Sbjct: 929  NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFN 988

Query: 265  TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
             L NG+C  G    G  LL  M  +   P+  +++ L+        ++ A +I+K+M   
Sbjct: 989  VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSR 1048

Query: 325  GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
            G E D +   +L++G C         +++A+ +F++M  K       TY ++I+   K K
Sbjct: 1049 GVEPDGKTYENLVKGHC-----NARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRK 1103

Query: 385  KTDEA 389
            K  EA
Sbjct: 1104 KFVEA 1108



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 190/407 (46%), Gaps = 5/407 (1%)

Query: 70   IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
            I +F    + G  W+V+ +N ++  +  L     A          G  P+  ++S +I  
Sbjct: 654  IIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVING 713

Query: 130  YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            YC   +  +  K+I+ M   G  PN  T+  ++  LC+  +L EA E   +M   G  P+
Sbjct: 714  YCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPD 773

Query: 190  IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
               Y  L+ G C  G +  A +    + +  + PDV TYTA++ GFC++G   EA +L +
Sbjct: 774  TIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 833

Query: 250  EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
            E + RG+ P+++TF  L NGYCK G       +   M +  C P+ ++Y+TL++GL K G
Sbjct: 834  EMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 893

Query: 310  KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
             +  A  +  EM + G + +    NS++ GLC     +   +E+A ++  +        D
Sbjct: 894  DLDSANELLHEMWKIGLQPNIFTYNSIVNGLC-----KSGNIEEAVKLVGEFEAAGLNAD 948

Query: 370  PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
              TY  ++    K  + D+A   L   +  G  P  +TFN ++   C  G ++    LL 
Sbjct: 949  TVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 1008

Query: 430  LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
             M      P+ T+++ L+ +         A A+Y     +GV P  K
Sbjct: 1009 WMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGK 1055



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 202/431 (46%), Gaps = 7/431 (1%)

Query: 44   DLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM-LNEQE 102
            D   +PR      F   ++   L E   +F+ +   G   SV   N  L  L    N+  
Sbjct: 593  DWGSDPRVFDV-FFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTA 651

Query: 103  TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
            TA+  F E    G+  N  +++I+I   C      EA  ++  M   GY P+V +++ ++
Sbjct: 652  TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVI 711

Query: 163  NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
            N  C+ G L +  +++++M + G KPN  TY  ++  LC + ++ EA E    +   G+ 
Sbjct: 712  NGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGIL 771

Query: 223  PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
            PD   YT ++DGFCK G    A +   E   R +TP+V+T+  + +G+C+ G  ++   L
Sbjct: 772  PDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 831

Query: 283  LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
               M  R   PD I+++ L+NG  K G I+ A  +   M++ G   +     +L+ GLC 
Sbjct: 832  FHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC- 890

Query: 343  KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
               +E D L+ A ++  +M K     +  TY  ++  L K    +EA+  +      G  
Sbjct: 891  ---KEGD-LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 946

Query: 403  PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
              T+T+  ++ A C  G++DKA  +L  M      P+  ++++L+          D   L
Sbjct: 947  ADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1006

Query: 463  YGAALKQGVIP 473
                L +G+ P
Sbjct: 1007 LNWMLAKGIAP 1017



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 148/311 (47%), Gaps = 5/311 (1%)

Query: 88   FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            F +L+         + A +  +     G +PN  T++ +I   C + D   A +++  M+
Sbjct: 847  FTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 906

Query: 148  DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
              G  PN+ T+  +VN LCKSG ++EA++++ +    G   +  TY  L+   C  G ++
Sbjct: 907  KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 966

Query: 208  EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            +A E+L  +   GL+P + T+  +M+GFC  G   +  +LLN  + +G+ PN  TFN L 
Sbjct: 967  KAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026

Query: 268  NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              YC          + K M  R   PD  +Y  L+ G      ++ A  +F+EM   GF 
Sbjct: 1027 KQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFS 1086

Query: 328  VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            V     + L++G     ++ K  +E A ++F++M +     D   +     T  KGK+ D
Sbjct: 1087 VSVSTYSVLIKGF----FKRKKFVE-AREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPD 1141

Query: 388  EALIHLHHAIE 398
              +  +   IE
Sbjct: 1142 TIVDPIDEIIE 1152



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 130/273 (47%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            KA  +K+   + + + + G + +V  +  L+  L    + ++A +   E    GL PN +
Sbjct: 856  KAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 915

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T++ ++   C   +  EA K++      G + +  T+T L+++ CKSG + +A E+L +M
Sbjct: 916  TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEM 975

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               G +P I T+N L+ G C  G +E+  ++L  +   G+ P+  T+  ++  +C     
Sbjct: 976  LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNL 1035

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
              A  +  +   RGV P+  T+  L  G+C      +   L + MK +       +YS L
Sbjct: 1036 KAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVL 1095

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
            + G  K  K   A  IF +M R G   D+ + +
Sbjct: 1096 IKGFFKRKKFVEAREIFDQMRRDGLAADKEIFD 1128



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 88/192 (45%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K+  + +  +I   +   G   ++  FN L+    +    E   K  +   + G+APN+ 
Sbjct: 961  KSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 1020

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            TF+ +++ YC +N+   A  +   M   G  P+  T+  LV   C +  +KEA  +  +M
Sbjct: 1021 TFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEM 1080

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               G   ++ TY+ L+KG     +  EA E+   ++ DGL  D   +    D   K  R 
Sbjct: 1081 KGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRP 1140

Query: 242  NEAMELLNEAIE 253
            +  ++ ++E IE
Sbjct: 1141 DTIVDPIDEIIE 1152


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 179/344 (52%), Gaps = 8/344 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ DF+ LL ++  +    T +  + +  S+G+  N++T +I+I  +C+ N    A  V+
Sbjct: 9   SIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVL 68

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   GY P+  TFT L+  LC  G++ EAL++ D+M   G +P++ TY  L+ GLC  
Sbjct: 69  GDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKD 128

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            ++ EA  +  ++   G+ P+ +TY++++ G C +G   EA+ L    I R + P+ +TF
Sbjct: 129 RQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTF 188

Query: 264 NTLFNGYCKEGTPM---KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           NTL +  CKEG      K +GL + M ++  +PD ++Y+TL++GL   G++R A+++F E
Sbjct: 189 NTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 248

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           MV +G   D      L   LC     +   L +A  + + +       D   Y IV+  +
Sbjct: 249 MVVYGQIPDLVTYRILFDYLC-----KNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGM 303

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            +  + + A          G  P   T+  +I  LC +G + +A
Sbjct: 304 CRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEA 347



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 155/323 (47%), Gaps = 8/323 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + ++  +   G   +    N L+ +   LN    A     +    G  P++ TF+ +IR 
Sbjct: 30  LSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRG 89

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C +    EA ++ D M   G+ P+V T+  L+N LCK  +L EAL +   M   G  PN
Sbjct: 90  LCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPN 149

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR---SNEAME 246
             TY+ L+ GLC +G  +EA  +   + +  + PD  T+  ++D  CK G     ++AM 
Sbjct: 150 NFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMG 209

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L  E  ++G+ P+ VT+NTL +G C  G     + L   M     +PD ++Y  L + L 
Sbjct: 210 LFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLC 269

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K  ++  A+ + K +     + D  + + ++ G+C ++ E    LE A  +F K++ K  
Sbjct: 270 KNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMC-RAGE----LEAARDLFSKLSSKGL 324

Query: 367 VTDPGTYGIVIRTLGKGKKTDEA 389
             D  TY I+I  L +     EA
Sbjct: 325 HPDVRTYTIMINGLCQQGLLAEA 347



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 140/276 (50%), Gaps = 2/276 (0%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  F+ L+ S+ +       L +  QM   G   N  T N L+   C++ R+  A+ +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L ++   G +P   T+T ++ G C  G+  EA++L ++    G  P+V+T+ TL NG CK
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
           +    + + L   M  +   P+  +YS+L++GL   G  + A+ +F  M+      D+  
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N+L+  LC +   +  +++ A  +FE+M+++  + D  TY  +I  L    +  +A+  
Sbjct: 188 FNTLVDALCKEGMIQ--IMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 245

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            H  +  G IP  +T+  +   LC   ++ +A++LL
Sbjct: 246 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLL 281



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 131/259 (50%), Gaps = 3/259 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +FD +  +G    V  +  L+  L    +   A+  FS+  + G++PN++T+S 
Sbjct: 96  IGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSS 155

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK---EALEVLDQMG 182
           +I   C    + EA ++   M      P+  TF  LV++LCK G ++   +A+ + ++M 
Sbjct: 156 LIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMS 215

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           + G  P+  TYN L+ GLC+VGR+ +A  +   +   G  PD+ TY  + D  CK  R  
Sbjct: 216 QQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLA 275

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EAM LL       + P++  ++ + +G C+ G       L   +  +   PD  +Y+ ++
Sbjct: 276 EAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMI 335

Query: 303 NGLLKWGKIRPAVSIFKEM 321
           NGL + G +  A  +F EM
Sbjct: 336 NGLCQQGLLAEASKLFGEM 354



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 10/286 (3%)

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R+   P+I  ++ LL  +  +        +   + + G+  + YT   +++ FC + R
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A  +L + ++ G  P+  TF TL  G C EG   + + L   M      PD ++Y T
Sbjct: 61  LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFE 359
           L+NGL K  ++  A+S+F +M+  G   +    +SL+ GLC +  W+E      A ++F 
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKE------AIRLFY 174

Query: 360 KMTKKVSVTDPGTYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
            M  +  + D  T+  ++  L   G  +  D+A+       + G IP T+T+N +I  LC
Sbjct: 175 AMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLC 234

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
             G++  A+ L   M  + +IP   +Y +L   L +  +  +A  L
Sbjct: 235 HVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVL 280



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 3/193 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALV---MLNEQETAVKFFSEASSYGLAPNSWTF 123
           KE I +F ++           FN L+ AL    M+   + A+  F E S  GL P++ T+
Sbjct: 167 KEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTY 226

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +I   C+     +A  +   M   G  P++ T+ IL + LCK+ RL EA+ +L  +  
Sbjct: 227 NTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEG 286

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P+I  Y+ ++ G+C  G +E A ++   + + GL PDV TYT +++G C+ G   E
Sbjct: 287 TNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAE 346

Query: 244 AMELLNEAIERGV 256
           A +L  E  E  +
Sbjct: 347 ASKLFGEMDENDI 359



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 8/254 (3%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P +  ++ ++    ++   +  + L  +    G+  N  T N L N +C          +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L  + K    P   +++TL+ GL   GKI  A+ +F +M   GF+ D     +L+ GLC 
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLC- 126

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
              +++ L E A  +F  M  K    +  TY  +I  L       EA+   +  I    +
Sbjct: 127 ---KDRQLTE-ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIM 182

Query: 403 PRTITFNNVIQALCGEGKI---DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           P  +TFN ++ ALC EG I   DKA+ L   M +   IP   +Y+ LI  L  + +  DA
Sbjct: 183 PDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDA 242

Query: 460 CALYGAALKQGVIP 473
            AL+   +  G IP
Sbjct: 243 IALFHEMVVYGQIP 256



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 5/183 (2%)

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P  + +S LL  + +       +S++K+M  FG   +   +N L+   C       + L 
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFC-----HLNRLG 62

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A+ V   + K        T+  +IR L    K  EAL         G  P  +T+  +I
Sbjct: 63  FAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLI 122

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             LC + ++ +AL L   M      P+  +Y  LI  L  L    +A  L+ A + + ++
Sbjct: 123 NGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIM 182

Query: 473 PQR 475
           P +
Sbjct: 183 PDQ 185


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 209/451 (46%), Gaps = 15/451 (3%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFND 90
           F A      E ++    P        VD + K   +    D+ + +KK G   S+  +N 
Sbjct: 301 FEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNA 360

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+ ++    + + A   F+     GL PN  T+SI+I  +C +     A   +  M + G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
               V  ++ L++  CK G+L+ A  + D+M   G KPN+  Y  L+ G C  G +  A+
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +   G+ P+ YT+TA++ G C   R  EA +L  E +E  V PN VT+N L  G+
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CKEG  ++   LL  M ++  +PD  +Y  L++GL   G++  A     ++     +++E
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600

Query: 331 --------RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
                       +L+ GLC     +  L++ A  +  +M    S+ +  TY   +  L  
Sbjct: 601 IEGCLPNVVTYTALINGLC-----KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTS 655

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
               ++A I LH  +  G +  T+T+N +I+  C  G+I +A  +L  M +    P   S
Sbjct: 656 EGNIEKA-IQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCIS 714

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           Y  +I +  +     +A  L+ + L +GV P
Sbjct: 715 YSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 745



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 190/401 (47%), Gaps = 40/401 (9%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +   + +L  L+ + +   A+  F E  S GL P+ + ++ ++R  C   DF  AR+VI 
Sbjct: 180 IRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIG 239

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV- 203
            M  +G   +V T+ + +  LCK+ R+ EA+E+ + +   G + ++ TY  L+ GLC V 
Sbjct: 240 RMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVE 299

Query: 204 ----------------------------------GRVEEAYEMLMNVKNDGLKPDVYTYT 229
                                             G +  A++++  VK  G+ P ++ Y 
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           A+++  CK G+ +EA  L N    +G+ PN VT++ L + +CK G     +  L  M + 
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
                   YS+L++G  K GK+R A S+F EM+  G + +  +  SL+ G C     ++ 
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC-----KEG 474

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            L +A++++ +MT K    +  T+  +I  L    +  EA       +E   IP  +T+N
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            +I+  C EG   +A  LL  M E   +P   +Y  LI+ L
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 188/392 (47%), Gaps = 15/392 (3%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E ++I + +   G    V  +  L++ L  + E E   +  +E   +G  P+    S ++
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                K +   A  +++ +   G  P++  +  L+NS+CK G+L EA  + + MG  G  
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  TY+ L+   C  G+++ A   L  +   G+K  VY Y++++ G CK+G+   A  L
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E I  G+ PNVV + +L +GYCKEG       L   M  +   P+  +++ L++GL  
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
             ++  A  +F EMV +    +E   N L+ G C +    +     A+++ ++M +K  V
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVR-----AFELLDEMVEKGLV 562

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLH---------HAIEMGHIPRTITFNNVIQALCGE 418
            D  TY  +I  L    +  EA   ++         + IE G +P  +T+  +I  LC  
Sbjct: 563 PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIE-GCLPNVVTYTALINGLCKI 621

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           G +DKA LL   M     +P++ +Y   +  L
Sbjct: 622 GLMDKAELLCREMLASNSLPNQNTYACFLDYL 653



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 175/354 (49%), Gaps = 5/354 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   ++  G + SV+ +N  +  L        AV+  +  S  GL  +  T+  ++   
Sbjct: 236 EVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGL 295

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +F    ++++ M + G+ P+    + LV+ L K G +  A ++++++ + G  P++
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             YN L+  +C  G+++EA  +  N+ + GL P+  TY+ ++D FCK G+ + A+  L +
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             E G+   V  +++L +G+CK G       L   M      P+ + Y++L++G  K G+
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A  ++ EM   G   +     +L+ GLC       + + +A ++F +M +   + + 
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLC-----HANRMAEANKLFGEMVEWNVIPNE 530

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            TY ++I    K   T  A   L   +E G +P T T+  +I  LC  G++ +A
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA 584



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 154/325 (47%), Gaps = 42/325 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L     ++  +   G + +   F  L+  L   N    A K F E   + + PN  
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD-- 179
           T++++I  +C + +   A +++D M + G  P+  T+  L++ LC +GR+ EA E ++  
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591

Query: 180 -----QMGRI-GCKPNIQTYNCLLKGLCYVGRVEEA----YEMLM--------------- 214
                ++  I GC PN+ TY  L+ GLC +G +++A     EML                
Sbjct: 592 QGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLD 651

Query: 215 ---------------NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
                          +V  +G   +  TY  ++ GFCK+GR  EA E+L   I+ G++P+
Sbjct: 652 YLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPD 711

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            ++++T+   YC+ G   + + L + M  R   PD ++Y+ L+ G    G++  A  +  
Sbjct: 712 CISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRD 771

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKS 344
           +M+R G + +    NSL+ G C+ S
Sbjct: 772 DMMRRGVKPNRATYNSLIHGTCLMS 796



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 79/179 (44%)

Query: 28  KLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSD 87
           K+ +   A L   E L     P       F+D + +    E+      +  +G   +   
Sbjct: 620 KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVT 679

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+     L   + A +        G++P+  ++S +I  YC + D  EA K+ + M 
Sbjct: 680 YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESML 739

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
           + G +P+   +  L+   C +G L +A E+ D M R G KPN  TYN L+ G C +  V
Sbjct: 740 NRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSV 798


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 190/383 (49%), Gaps = 6/383 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAV-KFFSEASSYGLAPNSWTFS 124
           +++ I     +KK+  +  V   + LL  ++ LN+Q     +F+ E   YG  PN + F+
Sbjct: 171 IEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFN 230

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           I++  +C   D   AR V D +   G  P+V +F  L++  C+S  ++E   +   M   
Sbjct: 231 ILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESE 290

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
              P++ TY+ L+ GLC   RVEEA  +   +   GL P+  T+T ++DG CK G+ + A
Sbjct: 291 RISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLA 350

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           +       +RG+ P+++T+N L NG C++G   +   LL  M      PDKI+++TL++G
Sbjct: 351 LRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDG 410

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             K G +  A+ I   MV  G E+D+    +L+ GLC         + DA ++ + M   
Sbjct: 411 CCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLC-----RDGRVRDAERMLKDMLSA 465

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY +VI    K          L      G +P  +T+N ++   C +G++  A
Sbjct: 466 GHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNA 525

Query: 425 LLLLFLMYEHAKIPSRTSYDMLI 447
            +LL  M     +P+  ++++L+
Sbjct: 526 KMLLHAMLNMEVVPNDITFNILL 548



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 171/328 (52%), Gaps = 5/328 (1%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           + D GY PNV  F IL++  CK G +  A  V D++ R G +P++ ++N L+ G C    
Sbjct: 217 VLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKN 276

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           VEE + +   ++++ + PDV+TY+A+++G CK  R  EA  L +E  E G+ PN VTF T
Sbjct: 277 VEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTT 336

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G CK G     +   ++MK R   PD I+Y+ L+NGL + G ++ A  +  EM+  G
Sbjct: 337 LIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNG 396

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
           F+ D+    +L+ G C    ++ D+ + A ++ ++M ++    D   +  +I  L +  +
Sbjct: 397 FKPDKITFTTLMDGCC----KDGDM-DSALEIKDRMVEEGIELDDVAFTALISGLCRDGR 451

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             +A   L   +  GH P   T+  VI   C +G +     LL  M    ++P   +Y+ 
Sbjct: 452 VRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNA 511

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           L+    +  +  +A  L  A L   V+P
Sbjct: 512 LMNGFCKQGQMKNAKMLLHAMLNMEVVP 539



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 150/308 (48%), Gaps = 9/308 (2%)

Query: 11  IFTNTNRRN-HNKIPQFNKLVVFAAASLSTAESLDLKE-------NPRSLQAQRFVDRI- 61
           +F   +RR     +  FN L+     S +  E   LK        +P        ++ + 
Sbjct: 248 VFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLC 307

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S ++E   +FD + + G   +   F  L+       + + A++ F      G+ P+  
Sbjct: 308 KESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLI 367

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C   D  EARK+++ M  NG+ P+  TFT L++  CK G +  ALE+ D+M
Sbjct: 368 TYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRM 427

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + +   +  L+ GLC  GRV +A  ML ++ + G KPD  TYT V+D FCK G  
Sbjct: 428 VEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDV 487

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
               +LL E    G  P VVT+N L NG+CK+G       LL  M     +P+ I+++ L
Sbjct: 488 KMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNIL 547

Query: 302 LNGLLKWG 309
           L+G  K G
Sbjct: 548 LDGHCKHG 555



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 132/257 (51%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  ++ L+  L   +  E A   F E    GL PN  TF+ +I   C       A +  +
Sbjct: 296 VFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFE 355

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M D G  P++ T+  L+N LC+ G LKEA ++L++M   G KP+  T+  L+ G C  G
Sbjct: 356 IMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDG 415

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            ++ A E+   +  +G++ D   +TA++ G C+ GR  +A  +L + +  G  P+  T+ 
Sbjct: 416 DMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYT 475

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            + + +CK+G    G  LLK M++   +P  ++Y+ L+NG  K G+++ A  +   M+  
Sbjct: 476 MVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNM 535

Query: 325 GFEVDERMMNSLLRGLC 341
               ++   N LL G C
Sbjct: 536 EVVPNDITFNILLDGHC 552



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 3/238 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           F+ +K  G    +  +N L+  L    + + A K  +E    G  P+  TF+ ++   C 
Sbjct: 354 FEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCK 413

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
             D   A ++ D M + G   +   FT L++ LC+ GR+++A  +L  M   G KP+  T
Sbjct: 414 DGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPT 473

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y  ++   C  G V+   ++L  ++ DG  P V TY A+M+GFCK G+   A  LL+  +
Sbjct: 474 YTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAML 533

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
              V PN +TFN L +G+CK G+    V       ++  + D  SY+ L+N  +K  K
Sbjct: 534 NMEVVPNDITFNILLDGHCKHGS---SVDFKIFNGEKGLVSDYASYTALVNESIKISK 588



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 98/203 (48%), Gaps = 3/203 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LKE   + + +  +G       F  L+       + ++A++        G+  +   F+ 
Sbjct: 382 LKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTA 441

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A +++  M   G+ P+  T+T++++  CK G +K   ++L +M R G
Sbjct: 442 LISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDG 501

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P + TYN L+ G C  G+++ A  +L  + N  + P+  T+  ++DG CK G S +  
Sbjct: 502 RVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD-F 560

Query: 246 ELLNEAIERGVTPNVVTFNTLFN 268
           ++ N   E+G+  +  ++  L N
Sbjct: 561 KIFNG--EKGLVSDYASYTALVN 581



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 7/184 (3%)

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEEKDLL 351
           P+   ++ L++G  K G +  A  +F E+ R G        N+L+ G C  K+ EE  +L
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           +   +     ++++S  D  TY  +I  L K  + +EA        EMG +P  +TF  +
Sbjct: 284 KSVME-----SERIS-PDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTL 337

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I   C  GKID AL    +M +    P   +Y+ LI  L +     +A  L    +  G 
Sbjct: 338 IDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGF 397

Query: 472 IPQR 475
            P +
Sbjct: 398 KPDK 401


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 194/389 (49%), Gaps = 5/389 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE  D+FD++   G N  V  +N +L               F      G+AP+ +
Sbjct: 349 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 408

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+++I+ Y N     +A  + + M D+G  P+V T+  ++ +LC+ G++ +A+E  +QM
Sbjct: 409 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 468

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+   YNCL++G C  G + +A E++  + N+G+  D+  ++++++  CK+GR 
Sbjct: 469 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 528

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  + +  +  G+ P+ V ++ L +GYC  G   K + +   M      P+ + Y TL
Sbjct: 529 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 588

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG  K G+I   +S+F+EM++ G +    + + ++ GL             A   F +M
Sbjct: 589 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVP-----AKMKFHEM 643

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           T+     D  TY IV+R L K +  DEA+        M      IT N +I  +    ++
Sbjct: 644 TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRV 703

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++A  L   +     +P+  +Y ++IT L
Sbjct: 704 EEAKDLFASISRSRLVPNVVTYSIMITNL 732



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 206/437 (47%), Gaps = 30/437 (6%)

Query: 60  RIKASPLK--ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET-------AVKFFSE 110
           R++   L+  E  D+ D +++ GT     D N  L AL               AV  F+ 
Sbjct: 50  RVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNR 109

Query: 111 ASSYG-----LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           A+S       L+P S T++I++ C    +    A      +   G   N+     L+   
Sbjct: 110 AASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGF 169

Query: 166 CKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LK 222
           C++ R  EAL++L  +   +GC P++ +Y+ LLK LC  G+  +A ++L  +   G    
Sbjct: 170 CEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 229

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P+V  Y  V+DGF K G  N+A +L  E ++RG+ P++VT+N++ +  CK     K    
Sbjct: 230 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 289

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L+ M  +  LP+  +Y+ L+ G    G+ + AV +FKEM R     D   ++ L+  LC 
Sbjct: 290 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLC- 348

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM--- 399
               +   +++A  VF+ M  K    D  +Y I++     G  T   L+ +    ++   
Sbjct: 349 ----KYGKIKEARDVFDTMAMKGQNPDVFSYNIML----NGYATKGCLVDMTDLFDLMLG 400

Query: 400 -GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G  P   TFN +I+A    G +DKA+++   M +H   P   +Y  +I  L ++ K  D
Sbjct: 401 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 460

Query: 459 ACALYGAALKQGVIPQR 475
           A   +   + QGV P +
Sbjct: 461 AMEKFNQMIDQGVAPDK 477



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 177/369 (47%), Gaps = 8/369 (2%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           NW+   +N+L+       + + AV+ F E   + + P+  T S+++   C      EAR 
Sbjct: 302 NWT---YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 358

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V D M   G +P+V ++ I++N     G L +  ++ D M   G  P+  T+N L+K   
Sbjct: 359 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 418

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G +++A  +   +++ G+KPDV TY  V+   C++G+ ++AME  N+ I++GV P+  
Sbjct: 419 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 478

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            +N L  G+C  G+ +K   L+  +       D + +S+++N L K G++  A +IF   
Sbjct: 479 AYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLT 538

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           V  G   D  + + L+ G C+    EK     A +VF+ M       +   Y  ++    
Sbjct: 539 VNVGLHPDAVVYSMLMDGYCLVGKMEK-----ALRVFDAMVSAGIEPNVVVYCTLVNGYC 593

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K  + DE L      ++ G  P TI ++ +I  L   G+   A +    M E        
Sbjct: 594 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDIC 653

Query: 442 SYDMLITKL 450
           +Y++++  L
Sbjct: 654 TYNIVLRGL 662



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 168/371 (45%), Gaps = 5/371 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F E    G+ P+  T++ ++   C      +A   +  M +    PN  T+  L+ 
Sbjct: 251 ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 310

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
               +G+ KEA+ V  +M R    P++ T + L+  LC  G+++EA ++   +   G  P
Sbjct: 311 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 370

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV++Y  +++G+   G   +  +L +  +  G+ P+  TFN L   Y   G   K + + 
Sbjct: 371 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 430

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M+     PD ++Y T++  L + GK+  A+  F +M+  G   D+   N L++G C  
Sbjct: 431 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 490

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                 LL+    + E M   + + D   +  +I  L K  +  +A       + +G  P
Sbjct: 491 G----SLLKAKELISEIMNNGMHL-DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 545

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             + ++ ++   C  GK++KAL +   M      P+   Y  L+    ++ +  +  +L+
Sbjct: 546 DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLF 605

Query: 464 GAALKQGVIPQ 474
              L++G+ P 
Sbjct: 606 REMLQRGIKPS 616



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 129/274 (47%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   I  +G +  +  F+ ++  L  L     A   F    + GL P++  +S+++  Y
Sbjct: 498 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGY 557

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A +V D M   G  PNV  +  LVN  CK GR+ E L +  +M + G KP+ 
Sbjct: 558 CLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPST 617

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             Y+ ++ GL   GR   A      +   G+  D+ TY  V+ G  K    +EA+ L  E
Sbjct: 618 ILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 677

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
                V  N++T NT+ +G  +     +   L   + +   +P+ ++YS ++  L+K G 
Sbjct: 678 LRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGL 737

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           +  A  +F  M   G E + R++N ++R L  K+
Sbjct: 738 VEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKN 771



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 156/357 (43%), Gaps = 5/357 (1%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           +PN   ++ +I  +  + D  +A  +   M   G  P++ T+  +V++LCK+  + +A  
Sbjct: 229 SPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEA 288

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
            L QM      PN  TYN L+ G    G+ +EA  +   ++   + PDV T + +M   C
Sbjct: 289 FLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLC 348

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G+  EA ++ +    +G  P+V ++N + NGY  +G  +    L  LM      PD  
Sbjct: 349 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 408

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +++ L+      G +  A+ IF EM   G + D     +++  LC         ++DA +
Sbjct: 409 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK-----MDDAME 463

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
            F +M  +    D   Y  +I+         +A   +   +  G     + F+++I  LC
Sbjct: 464 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 523

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             G++  A  +  L       P    Y ML+     + K   A  ++ A +  G+ P
Sbjct: 524 KLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 580



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 111/259 (42%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ + +FD++   G   +V  +  L+     +   +  +  F E    G+ P++  +SI
Sbjct: 563 MEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 622

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I           A+     M ++G   ++ T+ I++  L K+    EA+ +  ++  + 
Sbjct: 623 IIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN 682

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            K NI T N ++ G+    RVEEA ++  ++    L P+V TY+ ++    K G   EA 
Sbjct: 683 VKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAE 742

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +     G  PN    N +     K+   ++    L  + +RN   + ++   L++  
Sbjct: 743 DMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 802

Query: 306 LKWGKIRPAVSIFKEMVRF 324
              G  R  +        F
Sbjct: 803 SSKGTCREQIRFLPAKYHF 821


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 203/440 (46%), Gaps = 43/440 (9%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I   D + K    ++V  +N L+     L     A  +F E    GL P   T++ +I  
Sbjct: 247 IGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISG 306

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YCN+ ++ +A KV + M   G  PN  TFT +++ LC++  + EA+ +  +M      P+
Sbjct: 307 YCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPS 366

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN +++G C  G + EA+ +L  +   G  PD YTY  ++ G C VGR +EA E ++
Sbjct: 367 EVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVD 426

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +  +     N + ++ L +GYCKEG     V   ++M +R    D + Y+ L++G  +  
Sbjct: 427 DLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREH 486

Query: 310 KIRPAVSIFKEMVRFGFE-----------------------------VDERMM------N 334
             R    + KEM   G                               VDE  +       
Sbjct: 487 DTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYT 546

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT-DPGTYGIVIRTLGKGKKTDEALIHL 393
           +L+ GLC      K  L D  ++  K T    VT +  TYG  +  L +G   ++A + L
Sbjct: 547 ALINGLC------KAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKA-VQL 599

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
           HHA+  G +  T+++N +I+  C  GKI++A  LL  M ++  +P   +Y  +I +  + 
Sbjct: 600 HHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKR 659

Query: 454 EKSYDACALYGAALKQGVIP 473
               +A  L+   L +G+ P
Sbjct: 660 SNLQEAIKLWHTMLDKGLKP 679



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 189/419 (45%), Gaps = 34/419 (8%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FD +   G   +V  +  L+       E   A K ++E ++ G++PN++TF+ +I   C 
Sbjct: 285 FDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCR 344

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
            N   EA ++   M +    P+  T+ +++   C+SG + EA  +LD+M   G  P+  T
Sbjct: 345 ANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYT 404

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y  L+ GLC VGRV EA E + ++  D  K +   Y+A++ G+CK GR  +A+      +
Sbjct: 405 YRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMV 464

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           ERGV  ++V +  L +G  +E       GLLK M      PD + Y+ +++   K G ++
Sbjct: 465 ERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLK 524

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL--------------------- 351
            A  ++  MV  G   +     +L+ GLC     +K  L                     
Sbjct: 525 EAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFL 584

Query: 352 ---------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
                    E A Q+   M K    T   +Y I+IR   +  K +EA   LH   +   +
Sbjct: 585 DHLTRGGNMEKAVQLHHAMLKGFLATTV-SYNILIRGFCRLGKIEEATKLLHGMTDNDIL 643

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKSYD 458
           P  IT++ +I   C    + +A+ L   M +    P   +Y  L+       +LEK+++
Sbjct: 644 PDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFE 702



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 171/391 (43%), Gaps = 41/391 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +++ +   G + +   F  ++  L   N    A++ F E     + P+  T+++MI  +C
Sbjct: 319 VYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHC 378

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +  EA  ++D M   G+ P+  T+  L++ LC  GR+ EA E +D + +   K N  
Sbjct: 379 RSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNM 438

Query: 192 TYNCLLKGLCYVGRVEEA-----------------------------------YEMLMNV 216
            Y+ L+ G C  GR ++A                                   + +L  +
Sbjct: 439 CYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEM 498

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            N GL+PD   YT ++D   K G   EA  L +  ++ G  PNVVT+  L NG CK G  
Sbjct: 499 HNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLM 558

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            K   L K     +  P+ I+Y   L+ L + G +  AV +   M++ GF       N L
Sbjct: 559 DKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNIL 617

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +RG C         +E+A ++   MT    + D  TY  +I    K     EA+   H  
Sbjct: 618 IRGFC-----RLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTM 672

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
           ++ G  P T+ ++ ++   C  G+++KA  L
Sbjct: 673 LDKGLKPDTLAYSFLVHGCCIAGELEKAFEL 703



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 154/353 (43%), Gaps = 8/353 (2%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
            NE E     F E    GL  N  T+SI+I  +C + +   A   +D M        V  
Sbjct: 208 FNEAEL---LFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP 264

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           +  L+N  CK G    A    D+M   G  P + TY  L+ G C  G   +A+++   + 
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G+ P+ YT+TA++ G C+     EA+ L  E  ER + P+ VT+N +  G+C+ G   
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   LL  M  +  +PD  +Y  L++GL   G++  A     ++ +   +++    ++L+
Sbjct: 385 EAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALV 444

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            G C     ++   +DA      M ++    D   Y I+I    +   T      L    
Sbjct: 445 HGYC-----KEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMH 499

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             G  P  + + N+I      G + +A  L  +M +   +P+  +Y  LI  L
Sbjct: 500 NHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGL 552



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 180/406 (44%), Gaps = 34/406 (8%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V   + LL  L+        +  F +  S  + P+ + +S ++R  C   DF +A+++I 
Sbjct: 96  VRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIH 155

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV--------------------------L 178
            M  N    ++  + +L++ LCKS R+ EALE+                           
Sbjct: 156 WMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLF 215

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            +MG  G   N  TY+ L+   C  G ++ A   L  +    ++  VY Y ++++G+CK+
Sbjct: 216 KEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKL 275

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G ++ A    +E I++G+TP VVT+ +L +GYC EG   K   +   M  +   P+  ++
Sbjct: 276 GNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTF 335

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + +++GL +   +  A+ +F EM        E   N ++ G C         + +A+ + 
Sbjct: 336 TAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHC-----RSGNISEAFHLL 390

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           ++M  K  V D  TY  +I  L    +  EA   +    +  H    + ++ ++   C E
Sbjct: 391 DEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKE 450

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
           G+   A+    +M E         Y +LI   D   + +D  AL+G
Sbjct: 451 GRFKDAVSACRVMVERGVAMDLVCYAILI---DGTAREHDTRALFG 493



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 154/341 (45%), Gaps = 9/341 (2%)

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           F EA  +   M + G   N  T++IL++S C+ G +  A+  LD+M +   +  +  YN 
Sbjct: 208 FNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNS 267

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G C +G    A      + + GL P V TYT+++ G+C  G  ++A ++ NE   +G
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           ++PN  TF  + +G C+     + + L   MK+R  +P +++Y+ ++ G  + G I  A 
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAF 387

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
            +  EMV  GF  D      L+ GLC   +  E K+ ++D ++   K+           Y
Sbjct: 388 HLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMC-------Y 440

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             ++    K  +  +A+      +E G     + +  +I     E        LL  M+ 
Sbjct: 441 SALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHN 500

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           H   P    Y  +I +  +     +A  L+   + +G +P 
Sbjct: 501 HGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPN 541



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 175/402 (43%), Gaps = 33/402 (8%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMA-----------LVMLNEQETAVKFFSEASSYGLAP 118
           I I  SI +   +W ++ FND  ++           L+ML+  ++ +          L P
Sbjct: 41  ISILTSILRGKQSWRIA-FNDPFISRNLKPSHVDKVLMMLSLNDSRL-----MKDCNLMP 94

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
              T S ++        F +   + D +      P++  ++ +V SLC+     +A E++
Sbjct: 95  EVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMI 154

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
             M    CK +I  YN L+ GLC   R+ EA E+   +   GL+ +V TY          
Sbjct: 155 HWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY---------Y 205

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G+ NEA  L  E  E+G+  N +T++ L + +C+ G     +G L  M K +       Y
Sbjct: 206 GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPY 265

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQV 357
           ++L+NG  K G    A   F EM+  G         SL+ G C +  W +      A++V
Sbjct: 266 NSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHK------AFKV 319

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           + +MT K    +  T+  +I  L +     EA+       E   +P  +T+N +I+  C 
Sbjct: 320 YNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCR 379

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
            G I +A  LL  M     +P   +Y  LI+ L  + +  +A
Sbjct: 380 SGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEA 421



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 117/229 (51%), Gaps = 5/229 (2%)

Query: 100 EQETAVKF--FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           E +T   F    E  ++GL P++  ++ MI  +    +  EA  + D M D G  PNV T
Sbjct: 485 EHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVT 544

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           +T L+N LCK+G + +A E+L +   +    PN  TY C L  L   G +E+A + L + 
Sbjct: 545 YTALINGLCKAGLMDKA-ELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQ-LHHA 602

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
              G      +Y  ++ GFC++G+  EA +LL+   +  + P+ +T++T+    CK    
Sbjct: 603 MLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNL 662

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
            + + L   M  +   PD ++YS L++G    G++  A  +  EM+R G
Sbjct: 663 QEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRG 711



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 2/215 (0%)

Query: 49  PRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +DR  KA  LKE   ++D +  +G   +V  +  L+  L      + A   
Sbjct: 505 PDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELL 564

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E     + PN  T+   +       +  +A ++   M   G+     ++ IL+   C+
Sbjct: 565 SKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCR 623

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G+++EA ++L  M      P+  TY+ ++   C    ++EA ++   + + GLKPD   
Sbjct: 624 LGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLA 683

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           Y+ ++ G C  G   +A EL +E I RG+  N VT
Sbjct: 684 YSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 190/385 (49%), Gaps = 5/385 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + +   D +   G + +   +  L+  L  + +   A++         + PN   ++ 
Sbjct: 158 IHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT 217

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G  P+V T+  L++  C  G++K+A ++ ++M    
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ T+N L+ G C   R++EA  +L  +   G+KPDV+TY ++MD +C V   N+A 
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAK 337

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + N   +RGV PN+ +++ + +G+CK     + + L K M   N +PD ++Y++L++GL
Sbjct: 338 HIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGL 397

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GKI  A+ +  EM   G   D+   NS+L  LC     +K     A  +  KM  + 
Sbjct: 398 CKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDK-----AIALLTKMKDEG 452

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY  ++  L K  + ++A I     +  G+I     +  +IQ  C  G  D++L
Sbjct: 453 IQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESL 512

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL 450
            LL  M E+  IP+  +Y+++I  L
Sbjct: 513 DLLSKMEENGCIPNAVTYEIIICSL 537



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 190/390 (48%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+  F  +L +LV  N   T V    +    G+  +    SI+I C+        +  V+
Sbjct: 71  SIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVL 130

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   GY PNV T T L+  LC  G++ +AL+  D++  +G   N  +Y  L+ GLC V
Sbjct: 131 AKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKV 190

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G+   A ++L  V    ++P+V  Y  ++D  CKV   NEA +L +E + +G++P+VVT+
Sbjct: 191 GQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTY 250

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N L +G+C  G       L   M   N  P+  +++ L++G  K  +++ A ++   M++
Sbjct: 251 NALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMK 310

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G + D    NSL+   C+     K     A  +F  ++++    +  +Y I+I    K 
Sbjct: 311 QGIKPDVFTYNSLMDRYCLVKEVNK-----AKHIFNTISQRGVNPNIHSYSIMIHGFCKI 365

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           KK DEA+           IP  +T+N++I  LC  GKI  AL L+  M++      + +Y
Sbjct: 366 KKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITY 425

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + ++  L +  +   A AL      +G+ P
Sbjct: 426 NSILDALCKNHQVDKAIALLTKMKDEGIQP 455



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 188/359 (52%), Gaps = 7/359 (1%)

Query: 33  AAASLSTAESLDLK-ENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFND 90
            +A+L     +D K   P  +     +D + K   + E  D++  +   G +  V  +N 
Sbjct: 193 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNA 252

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    ++ + + A   F++     + PN +TF+I++  +C +    EA+ V+  M   G
Sbjct: 253 LISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQG 312

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             P+V T+  L++  C    + +A  + + + + G  PNI +Y+ ++ G C + +V+EA 
Sbjct: 313 IKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAM 372

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +  + + PDV TY +++DG CK+G+ + A++L++E  +RGV  + +T+N++ +  
Sbjct: 373 NLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDAL 432

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK     K + LL  MK     PD  +Y+TL++GL K G++  A  +F++++  G+ +D 
Sbjct: 433 CKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDV 492

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
            +  ++++G C        L +++  +  KM +   + +  TY I+I +L    + D+A
Sbjct: 493 NIYTAMIQGFC-----SHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKA 546



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 219/465 (47%), Gaps = 24/465 (5%)

Query: 12  FTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRS--LQAQRFVDR-IKASPLKE 68
           F   +   HN +  FN+L+               ++NP+    Q  + +   +K++    
Sbjct: 45  FHENDDNKHNLVSSFNRLL--------------HQKNPKPSIFQFGKILGSLVKSNHYST 90

Query: 69  RIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
            + +   ++ +G    +   + L+     L +   +    ++    G  PN  T + +I+
Sbjct: 91  VVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIK 150

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
             C K    +A +  D +   G+H N  ++  L+N LCK G+   AL++L ++     +P
Sbjct: 151 GLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQP 210

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N+  YN ++  +C V  V EA+++   + + G+ PDV TY A++ GFC VG+  +A +L 
Sbjct: 211 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLF 270

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           N+ I   + PNV TFN L +G+CKE    +   +L +M K+   PD  +Y++L++     
Sbjct: 271 NKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLV 330

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSV 367
            ++  A  IF  + + G   +    + ++ G C +K  +E      A  +F++M     +
Sbjct: 331 KEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDE------AMNLFKEMHCNNII 384

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  TY  +I  L K  K   AL  +    + G     IT+N+++ ALC   ++DKA+ L
Sbjct: 385 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 444

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           L  M +    P   +Y  L+  L +  +  DA  ++   L +G I
Sbjct: 445 LTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 98/195 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +++F  +  +     V  +N L+  L  L +   A+K   E    G+  +  
Sbjct: 364 KIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKI 423

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C  +   +A  ++  M D G  P++ T+T LV+ LCK+GRL++A  V + +
Sbjct: 424 TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDL 483

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   ++  Y  +++G C  G  +E+ ++L  ++ +G  P+  TY  ++        +
Sbjct: 484 LVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDEN 543

Query: 242 NEAMELLNEAIERGV 256
           ++A +LL E I RG+
Sbjct: 544 DKAEKLLREMITRGL 558



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 117/266 (43%), Gaps = 7/266 (2%)

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            ++  L++ KN   KP ++ +  ++    K    +  + L  +    G+T ++V  + L 
Sbjct: 57  SSFNRLLHQKNP--KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILI 114

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           N + + G       +L  + K    P+ I+ +TL+ GL   G+I  A+    ++V  GF 
Sbjct: 115 NCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFH 174

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           +++    +L+ GLC            A Q+  ++  K+   +   Y  +I ++ K K  +
Sbjct: 175 LNKVSYGTLINGLCKVGQTSA-----ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 229

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA       +  G  P  +T+N +I   C  GK+  A  L   M      P+  ++++L+
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +  +  +A  +    +KQG+ P
Sbjct: 290 DGFCKERRLKEAKNVLAMMMKQGIKP 315


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 202/389 (51%), Gaps = 15/389 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    ++ +++ D ++ +G   +   +N L+  +    + + A++      S+G  P++ 
Sbjct: 54  KGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTV 113

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +++  C+   + +A +++  M      PN  TF +++ SLC+ G L++A+++L++M
Sbjct: 114 NYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKM 173

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC  NI TYN ++ GLC    V+ A  +L  +K+ G KPD+ TY  ++ G C   R 
Sbjct: 174 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARW 233

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A EL++   + G  P+ VTFNTL    C++G  +  + + K M  + C P+ I+YST+
Sbjct: 234 VDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTI 293

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K  K+  A+ +F EM   GF  D+      +  L  +   + D +E+A Q   K+
Sbjct: 294 ISGLAKATKLDQALELFNEMGHKGFNPDK------IYQLLAECLNDDDTIEEAIQTVRKL 347

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                      Y  ++  L +  KT+ A+  + + +  G +P  +T+  +I+ L  EG +
Sbjct: 348 QDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYL 407

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++A  LL       K+ SR   D+L+  L
Sbjct: 408 NEARELLI------KLCSR---DVLVNSL 427



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 186/400 (46%), Gaps = 45/400 (11%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L    +   A+    +    G AP+  T++I++   C    + +A ++ID M 
Sbjct: 10  YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 69

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PN  T+ +L++ +C  G + +ALE+L  +   GCKP+   YN +LKGLC   R  
Sbjct: 70  AEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWG 129

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A E++  +  +   P+  T+  V+   C+ G   +A++LL +  + G T N+VT+N + 
Sbjct: 130 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 189

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG C++      +GLL  MK   C PD ++Y+TLL GL    +   A  +   M + G  
Sbjct: 190 NGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCL 249

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    N+L+  LC     +K L+ DA +VF++M  K    +  TY  +I  L K  K D
Sbjct: 250 PDNVTFNTLIGFLC-----QKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 304

Query: 388 EALIHLHHAIEMGH-------------------------------------IPRTITFNN 410
           +AL   +   EMGH                                      P T+ +N 
Sbjct: 305 QALELFN---EMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 361

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++  LC  GK + A+ ++  M     +P   +Y +LI  L
Sbjct: 362 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL 401



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 171/362 (47%), Gaps = 42/362 (11%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN++T++ +I   C +    +A  V+D M   G  P+V T+ IL+ + CK    ++A+E+
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           +D M   GC PN  TYN L+ G+C  G V++A E+L N+ + G KP    Y  V+ G C 
Sbjct: 65  IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R  +A EL+ E +     PN  TFN +    C++G   + + LL+ M K  C  + ++
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQ 356
           Y+ ++NGL +   +  A+ +  +M  +G + D    N+LL+GLC  + W       DA +
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWV------DAEE 238

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           + + MT+                                    G +P  +TFN +I  LC
Sbjct: 239 LMDNMTQN-----------------------------------GCLPDNVTFNTLIGFLC 263

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            +G +  A+ +   M +    P+  +Y  +I+ L +  K   A  L+     +G  P + 
Sbjct: 264 QKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI 323

Query: 477 PQ 478
            Q
Sbjct: 324 YQ 325



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 5/287 (1%)

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +PN  TYN L+  LC  G+V +A  +L ++   G  PDV TY  +++  CK     +AME
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L++     G TPN VT+N L +G C EG     + LL+ +    C P  ++Y+T+L GL 
Sbjct: 64  LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
              +   A  +  EM+R     +E   N ++  LC      K LL+ A Q+ EKM+K   
Sbjct: 124 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLC-----RKGLLQQAIQLLEKMSKHGC 178

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             +  TY  +I  L + +  D A+  L      G  P  +T+N +++ LC   +   A  
Sbjct: 179 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEE 238

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L+  M ++  +P   +++ LI  L Q     DA  ++     +G  P
Sbjct: 239 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTP 285



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 126/254 (49%), Gaps = 7/254 (2%)

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           ++P+ YTY  ++   C+ G+  +A+ +L++ + RG  P+VVT+N L    CK     + +
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            L+ LM+   C P+ ++Y+ L++G+   G +  A+ + + +   G +      N++L+GL
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 341 C-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           C  + W       DA ++  +M ++    +  T+ +VI +L +     +A+  L    + 
Sbjct: 123 CSAERW------GDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKH 176

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G     +T+N +I  LC +  +D A+ LL  M  +   P   +Y+ L+  L    +  DA
Sbjct: 177 GCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDA 236

Query: 460 CALYGAALKQGVIP 473
             L     + G +P
Sbjct: 237 EELMDNMTQNGCLP 250



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 43/276 (15%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ I + + + K G   ++  +N ++  L      + A+   S+  SYG  P+  T++ 
Sbjct: 163 LQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNT 222

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C+   + +A +++D M  NG  P+  TF  L+  LC+ G + +A+EV  QM   G
Sbjct: 223 LLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKG 282

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEA-----------------YEMLMNVKND--------- 219
           C PN  TY+ ++ GL    ++++A                 Y++L    ND         
Sbjct: 283 CTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQ 342

Query: 220 --------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
                   G+ P    Y A++ G C+ G++  A++++   +  G  P+ +T+  L  G  
Sbjct: 343 TVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLA 402

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            EG          L + R  L    S   L+N L+K
Sbjct: 403 YEG---------YLNEARELLIKLCSRDVLVNSLIK 429


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 199/411 (48%), Gaps = 16/411 (3%)

Query: 65  PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           PL E I +F    ++  + +V   N LL AL+     + A + F E SS    P+  T+ 
Sbjct: 239 PLDEAIALF----RELPDKNVCSHNILLKALLSAGRLKDACQHFDEMSS---PPDVVTYG 291

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            M+  YC + +   A K++D M   G   N T +T ++  LC  G++ +AL VL+ M   
Sbjct: 292 TMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMH 351

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G   +   +  ++ G C  G +  A  +   ++  GL  D  T+TA+++G C+ G   EA
Sbjct: 352 GVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEA 411

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             +L E +++G+  +VVT+  L +GYCK G  ++   +   M  R   P+ ++Y+ L +G
Sbjct: 412 DRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDG 471

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K G +R A  +  EM   G E++    NSL+ GLC     +   LE A ++  +M   
Sbjct: 472 LCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLC-----KFGNLEQAMRIMTEMEAA 526

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              TD  TY  +I TL K  + D A   L   ++ G  P   T+N ++   C  G+++  
Sbjct: 527 GHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGG 586

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITK--LDQLEKSYDACALYGAALKQGVIP 473
             LL  M E    P+  +Y+ L+ +  +D+  KS     +Y     Q V P
Sbjct: 587 KKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKS--TTEIYKGMHSQEVAP 635



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 166/320 (51%), Gaps = 5/320 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ ++K G          L+  L    E + A +   E    GL  +  T++++I  YC
Sbjct: 379 LFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYC 438

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            + +  EA +V + M      PNV T+T L + LCK G ++ A E+L +M   G + N+ 
Sbjct: 439 KRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVY 498

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ GLC  G +E+A  ++  ++  G + DVYTYT ++D  CK G  + A  +L E 
Sbjct: 499 TYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEM 558

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+ P++ T+N L NG+C  G    G  LL+ M ++N  P+ ++Y++L+        +
Sbjct: 559 LDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNM 618

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           +    I+K M       +E   N L++G C    + +++ E  Y   E + K + +T   
Sbjct: 619 KSTTEIYKGMHSQEVAPNENTYNILIKGHC----KARNMKEALYFHQEMIEKGLRLT-AS 673

Query: 372 TYGIVIRTLGKGKKTDEALI 391
           +Y  +IR L K KK  EA +
Sbjct: 674 SYSALIRLLNKKKKFSEARV 693



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 185/387 (47%), Gaps = 8/387 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           + A  LK+    FD +    +   V  +  ++    +  E E AVK   E ++ GL  N+
Sbjct: 266 LSAGRLKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNA 322

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             ++ +I   CNK    +A +V++ M  +G   +   FT +++  C  G L  A  + ++
Sbjct: 323 TVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEE 382

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + G   +  T+  L+ GLC  G ++EA  +L  + + GL  DV TYT ++DG+CK G 
Sbjct: 383 MQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGN 442

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA  + NE + R V PNVVT+  L +G CK+G       LL  M  +    +  +Y++
Sbjct: 443 MVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNS 502

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NGL K+G +  A+ I  EM   G   D     +L+  LC KS E     + A+ + ++
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLC-KSGE----FDRAHNMLQE 557

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  K       TY +++       + +     L   +E    P  +T+N++++  C +  
Sbjct: 558 MLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKN 617

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +     +   M+     P+  +Y++LI
Sbjct: 618 MKSTTEIYKGMHSQEVAPNENTYNILI 644



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 199/411 (48%), Gaps = 9/411 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+  + + D +   G   + + +  ++  L    +   A++   + + +G+A ++  F+ 
Sbjct: 303 LENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTT 362

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C+K D   AR++ + M   G   +  T T L+N LC++G LKEA  VL +M   G
Sbjct: 363 VISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKG 422

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              ++ TY  L+ G C  G + EA+ +   +    + P+V TYTA+ DG CK G    A 
Sbjct: 423 LDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAAN 482

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL+E   +G+  NV T+N+L NG CK G   + + ++  M+      D  +Y+TL++ L
Sbjct: 483 ELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTL 542

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+   A ++ +EM+  G +      N L+ G CM        +E   ++ E M +K 
Sbjct: 543 CKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGR-----VEGGKKLLEWMLEKN 597

Query: 366 SVTDPGTYGIVIRT--LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
              +  TY  +++   + K  K+   +    H+ E+   P   T+N +I+  C    + +
Sbjct: 598 VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVA--PNENTYNILIKGHCKARNMKE 655

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           AL     M E     + +SY  LI  L++ +K  +A   +     +G+  +
Sbjct: 656 ALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAE 706



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 5/316 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  LKE   +   +   G +  V  +  L+           A +  +E     +APN  
Sbjct: 404 RAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVV 463

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +    C + D   A +++  M + G   NV T+  L+N LCK G L++A+ ++ +M
Sbjct: 464 TYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + ++ TY  L+  LC  G  + A+ ML  + + G+KP + TY  +M+GFC  GR 
Sbjct: 524 EAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRV 583

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
               +LL   +E+ V PNVVT+N+L   YC +        + K M  +   P++ +Y+ L
Sbjct: 584 EGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNIL 643

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G  K   ++ A+   +EM+  G  +     ++L+R L      +K    +A   F+KM
Sbjct: 644 IKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLL-----NKKKKFSEARVFFDKM 698

Query: 362 TKKVSVTDPGTYGIVI 377
             +    +P  Y   +
Sbjct: 699 RNEGLTAEPDVYSFYM 714


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 200/416 (48%), Gaps = 18/416 (4%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +++ + K   N  V  +  L+  L    + + A+  F E +  G+ PN   +SI++   C
Sbjct: 185 VYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLC 244

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                F+A+++   M  +G + ++ T+ +L+N  CKSG L +A  +L  + + G    + 
Sbjct: 245 QAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVI 304

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            Y CL+ GL    R EEA+     +  + +KPDV  YT ++ G  + GR  EA+ LL E 
Sbjct: 305 GYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEM 364

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            ERG+ P+ + +N L  G+C  G   +   L   + K +C P+  +YS L+ G+ K G I
Sbjct: 365 TERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLI 424

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM--TKKVS--- 366
             A  IFKEM + G        NSL+ GLC     + + LE+A  +F +M   +K S   
Sbjct: 425 NKAQHIFKEMEKLGCLPSVVTFNSLINGLC-----KANRLEEARLLFYQMEIVRKPSLFL 479

Query: 367 --------VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
                   V D  +  +++  L +     +A   L   ++ G +P   T+N +I   C  
Sbjct: 480 RLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKF 539

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           G I+ A  L   M     +P   +Y  LI  L +  ++ DA  ++   +K+G +P+
Sbjct: 540 GNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPE 595



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 198/415 (47%), Gaps = 15/415 (3%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R++Q       IK +  +    +   +K      S   F+ L+ A       E AV+ F 
Sbjct: 93  RTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFG 152

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
               +   P+ + F++++     K  F  A  V + M     +P+V T+ IL++ LCK+ 
Sbjct: 153 LMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTC 212

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           + ++AL + D+M   G  PN   Y+ +L GLC   ++ +A  +   ++  G   D+ TY 
Sbjct: 213 KTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYN 272

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++GFCK G  ++A  LL    + G    V+ +  L NG  +     +     + M + 
Sbjct: 273 VLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRE 332

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
           N  PD + Y+ ++ GL + G++  A+++  EM   G   D    N+L++G C     +  
Sbjct: 333 NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFC-----DMG 387

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE-MGHIPRTITF 408
            L++A  +  +++K     +  TY I+I  + K    ++A  H+   +E +G +P  +TF
Sbjct: 388 YLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQ-HIFKEMEKLGCLPSVVTF 446

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ-LEKSYDACAL 462
           N++I  LC   ++++A LL + M E  + PS      L  +L Q  +K +D  +L
Sbjct: 447 NSLINGLCKANRLEEARLLFYQM-EIVRKPS------LFLRLSQGTDKVFDIASL 494



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 157/337 (46%), Gaps = 58/337 (17%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+    E +  GL P++  ++ +I+ +C+     EA  +   +  +   PN  T++IL+ 
Sbjct: 357 ALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILIC 416

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA-------------- 209
            +CK+G + +A  +  +M ++GC P++ T+N L+ GLC   R+EEA              
Sbjct: 417 GMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPS 476

Query: 210 ----------------------------------YEMLMNVKNDGLKPDVYTYTAVMDGF 235
                                             Y++LM + + G+ PD+ TY  +++GF
Sbjct: 477 LFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGF 536

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK G  N A +L  E   +G  P+ VT+ TL +G  + G     + + + M K+ C+P+ 
Sbjct: 537 CKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPES 596

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVR--FGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
            +Y T++    +   I  A+S++ + +R   G+E DE++       +  +S++ ++ L+ 
Sbjct: 597 STYKTIMTWSCRENNISLALSVWMKYLRDFRGWE-DEKVR------VVAESFDNEE-LQT 648

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
           A +   +M  K    D   Y I +  L + K+  EA 
Sbjct: 649 AIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAF 685



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 125/307 (40%), Gaps = 65/307 (21%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI-------------------D 144
           A   F E    G  P+  TF+ +I   C  N   EAR +                    D
Sbjct: 427 AQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTD 486

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +FD      + +  +++  LC+SG + +A ++L Q+   G  P+I+TYN L+ G C  G
Sbjct: 487 KVFD------IASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFG 540

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            +  A+++   ++  G  PD  TY  ++DG  + GR+ +A+E+  + +++G  P   T+ 
Sbjct: 541 NINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYK 600

Query: 265 TLFNGYCKEGTPMKGVG-----------------------------------LLKL-MKK 288
           T+    C+E      +                                    LL++ +K 
Sbjct: 601 TIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKS 660

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           +N   D   Y+  L GL++  +   A +IF  +  F   +       L+  LCM   E  
Sbjct: 661 KNF--DLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMV--ENL 716

Query: 349 DLLEDAY 355
           D+  D +
Sbjct: 717 DMAMDVF 723



 Score = 38.5 bits (88), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 58/129 (44%)

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
           ++++ E  + E A + F  M       D   + +++  L + +    AL   +  ++   
Sbjct: 135 IEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNL 194

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P  +T+  +I  LC   K   AL+L   M +   +P++  Y ++++ L Q +K +DA  
Sbjct: 195 NPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQR 254

Query: 462 LYGAALKQG 470
           L+      G
Sbjct: 255 LFSKMRASG 263


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 223/469 (47%), Gaps = 29/469 (6%)

Query: 19  NHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKK 78
           +H     F+ L    AA L  + S           A R  D ++A     R+D F S   
Sbjct: 115 SHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAF---SRMDEFQS--- 168

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
                +   +N +L ALV       A+  ++   + G APN  T+++++   C +    +
Sbjct: 169 ---RPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGD 225

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A K+ D M D G  PNV  +T+L++SLC +G++ EA+++L  M   GC P+  TYN  L 
Sbjct: 226 ALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLS 285

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC VGRV EA++ L+ +++ G    +  Y+ ++DG  +  R +E        +ER ++P
Sbjct: 286 GLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP 345

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           +VV +  +  G  + G     +  L +MKK+  +PD   Y+T+L  L   G +  A ++ 
Sbjct: 346 DVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLR 405

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
            EM++    +D      ++ GLC     ++ L+++A Q+F++M +        TY  +I 
Sbjct: 406 SEMLQNNLVLDSTTQTIMICGLC-----KRGLVDEAMQIFDEMGEHGCDPTVMTYNALID 460

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPR-----TITFNNV---------IQALCGEGKIDKA 424
              +  + +EA + L H +EMG+ P      T+  N V         +  +C  G++ KA
Sbjct: 461 GFYREGRLEEARM-LFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKA 519

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             LL  + +   +P   +Y+ LI  L +      A  L+     +G+ P
Sbjct: 520 YKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISP 568



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 195/409 (47%), Gaps = 9/409 (2%)

Query: 23  IPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTN 82
           IP  ++L +F    L +A S  L+  P    A   + R+ +   +   D     +  G  
Sbjct: 79  IPAASRLRLF----LFSALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLP 134

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
            S S F  L+ A         AV+ FS    +   P ++ ++ +++   +      A  +
Sbjct: 135 ASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALAL 194

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
            + M   G  PN  T+ +L++ LCK G   +AL++ D+M   G  PN++ Y  LL  LC 
Sbjct: 195 YNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCN 254

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            G+++EA ++L ++K+ G  PD  TY A + G CKVGR NEA + L    + G    +  
Sbjct: 255 AGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKG 314

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           ++ L +G  +     +G G  K M +RN  PD + Y+ ++ G  + G+I  A+S    M 
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
           + GF  D    N++L+ LC    +  D LE A+ +  +M +   V D  T  I+I  L K
Sbjct: 375 KKGFVPDTFCYNTVLKVLC----DHGD-LERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
               DEA+       E G  P  +T+N +I     EG++++A +L   M
Sbjct: 430 RGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 187/406 (46%), Gaps = 46/406 (11%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A+ F       G  P+++ ++ +++  C+  D   A  +   M  N    + TT TI+
Sbjct: 364 EDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIM 423

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +  LCK G + EA+++ D+MG  GC P + TYN L+ G    GR+EEA  ML +    G 
Sbjct: 424 ICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA-RMLFHKMEMGN 482

Query: 222 KPDVY--------------TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            P ++              +   ++   C+ G+  +A +LL   I+ GV P+VVT+NTL 
Sbjct: 483 NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG CK       V L K ++ +   PD+I+Y TL++GLL+  +   A+ +F+ +++ G  
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS 602

Query: 328 VDERMMNSLLRGLC-MKS-------W-----------EEKDLLEDAYQVFE--------- 359
               + NS++R LC MK        W            E ++L +A++  E         
Sbjct: 603 PSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVR 662

Query: 360 ---KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
              K+ ++        Y I +  L + ++TD+AL   H   E G          +I  LC
Sbjct: 663 ELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLC 722

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
            +  ++ A+ ++      + I S+   + L+  L    +  DA AL
Sbjct: 723 WDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQAL 768



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 46/267 (17%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A K        G+ P+  T++ +I   C   +   A ++   +   G  P+  T+  L++
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLID 578

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY------------- 210
            L ++ R  +A+ +   + + G  P++  YN +++ LC + ++ +A              
Sbjct: 579 GLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNF 638

Query: 211 ----EMLMNVK--------NDGLKPDVYT-----------YTAVMDGFCKVGRSNEAMEL 247
               E+L N          +DG++  +             YT  + G C+V R+++A+ +
Sbjct: 639 PVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRI 698

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG-LLKLMKKRNCLPDKISYSTLLNGLL 306
            +   E G+         L N  C +      V  +L  + K   L   +      N LL
Sbjct: 699 FHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVG-----NRLL 753

Query: 307 KWGKI----RPAVSIFKEMVRFGFEVD 329
           +W  I    + A ++   M   G+++D
Sbjct: 754 RWLCICYRRQDAQALAWRMHLVGYDMD 780


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 198/403 (49%), Gaps = 6/403 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + + G       F  L++      + E      +    YG + ++ T ++++R  C
Sbjct: 168 VFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLC 227

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            K  F +  +    M + G  PNV  +T  ++ LCK   +K+A  VL++M   G KPN+ 
Sbjct: 228 EKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVY 287

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           T+  L+ GLC +G  E A+ + +  +K+   KP+V+TYT ++ G+C+ G+   A  LL  
Sbjct: 288 THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVR 347

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +E+G+ PN  T+ TL  G+CK G+  +   L+  MK+   LP+  +Y+ +++G  K GK
Sbjct: 348 MVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGK 407

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I+ A  + +     G + D+     L+   C     ++  +  A  +F++M +     D 
Sbjct: 408 IQEAYKVLRMATSQGLKFDKITYTILITEHC-----KQGHITYALDLFDRMVENGCCPDI 462

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             Y  +I T  + ++ +E+       + +G +P   T+ ++I   C  G+   AL +   
Sbjct: 463 EAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFER 522

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M ++       +Y  LI+ L +  +  +A ALY   L + ++P
Sbjct: 523 MVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP 565



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 189/399 (47%), Gaps = 10/399 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            K+  + F  + + GT  +V ++   +  L      + A     E    GL PN +T + 
Sbjct: 232 FKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 291

Query: 126 MIRCYCNKNDFFEA-RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           +I   C       A R  +  +  + Y PNV T+T+++   C+ G+L  A  +L +M   
Sbjct: 292 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 351

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G KPN  TY  L+ G C  G  + A+E++  +K +G  P++YTY AV+DGFCK G+  EA
Sbjct: 352 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 411

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            ++L  A  +G+  + +T+  L   +CK+G     + L   M +  C PD  +Y++L++ 
Sbjct: 412 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIST 471

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             +  ++  +   F + +  G    ++   S++ G C      +  L  A +VFE+M + 
Sbjct: 472 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVG---RSTL--ALRVFERMVQN 526

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TYG +I  L K  + +EA       ++   +P  +T   +    C   K   A
Sbjct: 527 GCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIA 586

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           + +L  + +  ++    + D+++ KL  L    DA +L+
Sbjct: 587 VSVLDRLDKRQQVH---TVDVVVRKLSAL-GDVDAASLF 621



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 168/362 (46%), Gaps = 12/362 (3%)

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           E  S+GL     T + ++R       F  ARKV D M   G  P+  +F  LV   C+ G
Sbjct: 136 EMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREG 195

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +++E   +L  M R G   +  T   +++ LC  GR ++  E    +   G  P+V  YT
Sbjct: 196 KVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYT 255

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL-LKLMKK 288
           A +DG CK     +A  +L E + RG+ PNV T  TL +G CK G   +   L LKL+K 
Sbjct: 256 AWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKS 315

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
            +  P+  +Y+ ++ G  + GK+  A  +   MV  G + +     +L+ G C     + 
Sbjct: 316 SSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHC-----KG 370

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
              + A+++  KM ++  + +  TY  VI    K  K  EA   L  A   G     IT+
Sbjct: 371 GSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITY 430

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT------KLDQLEKSYDACAL 462
             +I   C +G I  AL L   M E+   P   +Y  LI+      ++++ +K +D C +
Sbjct: 431 TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 490

Query: 463 YG 464
            G
Sbjct: 491 IG 492



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 138/305 (45%), Gaps = 8/305 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K        ++ + +K++G   ++  +N ++       + + A K    A+S GL  +  
Sbjct: 369 KGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKI 428

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I  +C +     A  + D M +NG  P++  +T L+++ C+  +++E+ +  D+ 
Sbjct: 429 TYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKC 488

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             IG  P  QTY  ++ G C VGR   A  +   +  +G   D  TY A++ G CK  R 
Sbjct: 489 LMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRL 548

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L    +++ + P  VT  TL   YC+       V +L  + KR  +    +   +
Sbjct: 549 EEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVH---TVDVV 605

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  L   G +  A    K+++   + VD       +      S  E +    A ++ EK 
Sbjct: 606 VRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFI-----NSCYENNRYALASEMSEKF 660

Query: 362 TKKVS 366
           +KK+S
Sbjct: 661 SKKIS 665



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 142/347 (40%), Gaps = 41/347 (11%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           M+  +       EA  ++  M  +G    V T   ++    ++G    A +V D M R G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+ +++  L+   C  G+VEE   +L  +   G   D  T T V+   C+ GR  +  
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E     +E G  PNVV                                   +Y+  ++GL
Sbjct: 237 EFFRRMLETGTPPNVV-----------------------------------NYTAWIDGL 261

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K   ++ A  + +EMV  G + +     +L+ GLC   W E+     A+++F K+ K  
Sbjct: 262 CKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER-----AFRLFLKLIKSS 316

Query: 366 SVT-DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           S   +  TY ++I    +  K   A + L   +E G  P T T+  +I   C  G  D+A
Sbjct: 317 SYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRA 376

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
             L+  M +   +P+  +Y+ +I    +  K  +A  +   A  QG+
Sbjct: 377 FELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGL 423


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 211/441 (47%), Gaps = 31/441 (7%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A   ++   + + +++ G   SV  FN +L  L    + + A+  F E       PNS T
Sbjct: 332 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSST 390

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I   C      EA +++D M      PN+ T  I+V+ LCK+ +L+EA ++ +   
Sbjct: 391 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 450

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           + GC P+  TY  L+ GL   G+V+EAY +   + + G   +   YT+++  F   GR  
Sbjct: 451 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 510

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +  ++  E I RG  P++   NT  +   K G   KG  + + ++    LPD  SYS L+
Sbjct: 511 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 570

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-----------MKSWEEK--- 348
           +GL K G+ R   +IF  M + GF +D R  N+++ G C           ++  +EK   
Sbjct: 571 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 630

Query: 349 ----------------DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
                           D L++AY +FE+   K    +   Y  +I   GK  + DEA + 
Sbjct: 631 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 690

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L   ++ G  P   T+N+++ AL    +I++AL+    M E    P+  +Y +LI  L +
Sbjct: 691 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 750

Query: 453 LEKSYDACALYGAALKQGVIP 473
           ++K   A   +    KQG++P
Sbjct: 751 VQKYNKAFVFWQDMQKQGLVP 771



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 199/408 (48%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   I D ++      ++   N ++  L    + E A K F  AS  G  P+  T+  
Sbjct: 404 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 463

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I     K    EA ++ + M D G++ N   +T L+ +    GR ++  ++  ++ R G
Sbjct: 464 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRG 523

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CKP++   N  +  +   G VE+   +  ++++ G  PDV +Y+ ++ G  K G++ E  
Sbjct: 524 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 583

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + +   ++G   +   +N + +G+CK G   K   +L+ MK++   P   +Y  +++GL
Sbjct: 584 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 643

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++  A  +F+E    G E++  + +SL+ G     + +   +++AY + E+M KK 
Sbjct: 644 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG-----FGKVGRIDEAYLILEEMMKKG 698

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  T+  ++  L K ++ +EAL+      EM   P T T++ +I  LC   K +KA 
Sbjct: 699 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 758

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +    M +   +P+  +Y  +I+ L ++    DA +L+      G IP
Sbjct: 759 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIP 806



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 158/318 (49%), Gaps = 5/318 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF  + + G    ++  N  +  +    E E     F +  SYG  P+  ++SI+I    
Sbjct: 515 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 574

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 E   +   M   G+  +   +  +V+  CKSG++ +A E+L++M     +P + 
Sbjct: 575 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVA 634

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  ++ GL  + R++EAY +    K+ G++ +V  Y++++DGF KVGR +EA  +L E 
Sbjct: 635 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 694

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+TPNV T+N+L +   K     + +   + MK+  C P+  +YS L+NGL +  K 
Sbjct: 695 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKY 754

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A   +++M + G   +     +++ GL      +   + DAY +FE+      + D  
Sbjct: 755 NKAFVFWQDMQKQGLVPNVVTYTTMISGLA-----KVGNITDAYSLFERFKANGGIPDAA 809

Query: 372 TYGIVIRTLGKGKKTDEA 389
           ++  +I  +    +  EA
Sbjct: 810 SFNALIEGMSNANRAMEA 827



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 192/416 (46%), Gaps = 6/416 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  L     VDR+ KA  L+E   IF+S  + G N     +  L+  L    + + A + 
Sbjct: 421 PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 480

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F +    G   N   ++ +IR +       +  K+   +   G  P++T     ++ + K
Sbjct: 481 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFK 540

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G +++   + + +   G  P++++Y+ L+ GL   G+  E   +   +K  G   D   
Sbjct: 541 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 600

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y AV+DGFCK G+ ++A E+L E  E+ V P V T+  + +G  K     +   L +  K
Sbjct: 601 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 660

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            +    + + YS+L++G  K G+I  A  I +EM++ G   +    NSLL  L +K+ E 
Sbjct: 661 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDAL-VKAEE- 718

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
              + +A   F+ M +     +  TY I+I  L + +K ++A +      + G +P  +T
Sbjct: 719 ---INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 775

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +  +I  L   G I  A  L      +  IP   S++ LI  +    ++ +A  ++
Sbjct: 776 YTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVF 831



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 201/426 (47%), Gaps = 13/426 (3%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP  +     +D + K   + E   +F+ +   G N +   +  L+    +   +E   K
Sbjct: 455 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 514

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F E    G  P+    +  + C     +  + R + + +   G+ P+V +++IL++ L 
Sbjct: 515 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 574

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K+G+ +E   +   M + G   + + YN ++ G C  G+V +AYE+L  +K   ++P V 
Sbjct: 575 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVA 634

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY A++DG  K+ R +EA  L  EA  +G+  NVV +++L +G+ K G   +   +L+ M
Sbjct: 635 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 694

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            K+   P+  ++++LL+ L+K  +I  A+  F+ M       +    + L+ GLC     
Sbjct: 695 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKY 754

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
            K     A+  ++ M K+  V +  TY  +I  L K     +A          G IP   
Sbjct: 755 NK-----AFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 809

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS-RTSYDMLITKLDQLEKS--YDACALY 463
           +FN +I+ +    +  +A    + ++E  ++   R +    I+ LD L KS   +  A+ 
Sbjct: 810 SFNALIEGMSNANRAMEA----YQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIV 865

Query: 464 GAALKQ 469
           GA L++
Sbjct: 866 GAVLRE 871



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 106/466 (22%), Positives = 190/466 (40%), Gaps = 64/466 (13%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++   +++ G    V  F  L+ AL    +   A+    E     L P+   +++ I C
Sbjct: 199 LELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDC 258

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +    +   A K    +   G  P+  ++T ++  LCK+GRL EA E+  QM      P 
Sbjct: 259 FGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC 318

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY----------------------- 226
              YN ++ G    GR E+AY++L  ++  G  P V                        
Sbjct: 319 AYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE 378

Query: 227 -----------TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
                      TY  ++D  C  GR  EA  +L+E     + PN++T N + +  CK   
Sbjct: 379 VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 438

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   + +   +R C PD ++Y +L++GL K G++  A  +F++M+  G   +  +  S
Sbjct: 439 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 498

Query: 336 LLRGLCMKSWEE------KDLL------------------------EDAYQVFEKMTKKV 365
           L+R   +   +E      K+L+                        E    +FE +    
Sbjct: 499 LIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 558

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            + D  +Y I+I  L K  +  E     H   + G       +N V+   C  GK+ KA 
Sbjct: 559 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 618

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
            +L  M E    P+  +Y  ++  L ++++  +A  L+  A  +G+
Sbjct: 619 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGI 664



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 178/383 (46%), Gaps = 6/383 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L  ALV     + AV   +        P    ++++I           A +++  M + G
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           Y   V  FT LV +L + G++ +AL ++D++     +P+I  YN  +      G V+ A+
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           +    +K  GLKPD  +YT+++   CK GR  EA EL  +       P    +NT+  GY
Sbjct: 270 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
              G       LL+ +++R C+P  +S++++L  L K  K+  A+S+F E+++   E + 
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNS 388

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N ++  LC+        +E+AY++ ++M       +  T  I++  L K +K +EA 
Sbjct: 389 STYNIIIDMLCLGGR-----VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 443

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                A + G  P  +T+ ++I  L  +G++D+A  L   M +     +   Y  LI   
Sbjct: 444 KIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNF 503

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
               +  D   ++   +++G  P
Sbjct: 504 FIHGRKEDGHKIFKELIRRGCKP 526



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 158/337 (46%), Gaps = 6/337 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           + S +  L+ AL      E A++   +    G       F+ ++R    +    +A  ++
Sbjct: 178 AFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALV 237

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D +  +   P++  + + ++   K+G +  A +   ++   G KP+  +Y  ++  LC  
Sbjct: 238 DEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKA 297

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           GR+ EA E+   ++ +   P  Y Y  ++ G+   GR  +A +LL    ERG  P+VV+F
Sbjct: 298 GRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSF 357

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N++     K+    + + L ++MKK +  P+  +Y+ +++ L   G++  A  I  EM  
Sbjct: 358 NSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEH 416

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                +   +N ++  LC     +   LE+AY++FE  +++    D  TY  +I  LGK 
Sbjct: 417 ASLFPNLLTVNIMVDRLC-----KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKK 471

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            + DEA       ++ GH    + + ++I+     G+
Sbjct: 472 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 508



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 134/288 (46%), Gaps = 10/288 (3%)

Query: 174 ALE-VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           ALE VL++M  +G     Q    L   L    R+++A   +  ++    +P    YT ++
Sbjct: 127 ALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLI 186

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
               +  R   A+ELL +  E G    V  F TL     +EG     + L+  +K     
Sbjct: 187 GALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLE 246

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD + Y+  ++   K G +  A   F E+   G + D+    S++  LC     +   L 
Sbjct: 247 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLC-----KAGRLG 301

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +A ++F +M  + SV     Y  +I   G   + ++A   L    E G IP  ++FN+++
Sbjct: 302 EAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSIL 361

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKSY 457
             L  + K+D+AL L  +M + A+ P+ ++Y+++I  L    ++E++Y
Sbjct: 362 TCLGKKRKVDEALSLFEVMKKDAE-PNSSTYNIIIDMLCLGGRVEEAY 408


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 191/366 (52%), Gaps = 10/366 (2%)

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
           S   AP+++T++ +IR  C +    +A  V D M   G  P+V T++IL+++ CK    K
Sbjct: 153 SVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYK 212

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           +A+ +LD+M   GC+P+I TYN L+  +C  G V EA ++L ++ + G KPD  TYT V+
Sbjct: 213 QAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVL 272

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
              C   R  EA +LL +       P+ VTFN +    C++G   +   +L  M +  C 
Sbjct: 273 KSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCT 332

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFK----EMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           PD I+YS++++GL K  ++  A+ + K    EMV      D+   N+++  LC     +K
Sbjct: 333 PDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLC-----QK 387

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT-LGKGKKTDEALIHLHHAIEMGHIPRTIT 407
            L + A +V ++M++   + D  TY  ++   L K  KT+EAL  L+  +  G  P T T
Sbjct: 388 GLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTT 447

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           + ++   L  E ++++A+ +   +      P +  Y+ ++  L +  ++  A   +   +
Sbjct: 448 YKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMV 507

Query: 468 KQGVIP 473
             G +P
Sbjct: 508 SNGCMP 513



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 185/364 (50%), Gaps = 8/364 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+ AL +      A+  F +    G +P+  T+SI++   C ++ + +A  ++D M 
Sbjct: 163 YNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMR 222

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P++ T+ +L+N++C  G + EAL+VL+ +   GCKP+  TY  +LK LC   R E
Sbjct: 223 SKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWE 282

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA ++L  + ++   PD  T+ AV+   C+ G    A ++L +  E G TP+++T++++ 
Sbjct: 283 EADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIM 342

Query: 268 NGYCKEGTPMKGVGLLK----LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           +G CKE    + + LLK     M  +NC+PD+++++T++  L + G    A+ +  EM  
Sbjct: 343 DGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSE 402

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D    N ++ G   KS +     E+A  +   M       D  TY  +   L + 
Sbjct: 403 HGCIPDITTYNCIVDGFLCKSCKT----EEALDLLNLMVSNGLCPDTTTYKSLAFGLSRE 458

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + + A+        MG  P  + +N ++  LC + + D A+     M  +  +P  ++Y
Sbjct: 459 DEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTY 518

Query: 444 DMLI 447
            +L+
Sbjct: 519 IILV 522



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 186/366 (50%), Gaps = 10/366 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +FD +   G + SV  ++ LL A    +  + AV    E  S G  P+  T++++I
Sbjct: 178 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLI 237

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C++ D  EA KV++ +   G  P+  T+T ++ SLC S R +EA ++L +M    C 
Sbjct: 238 NAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCA 297

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM-- 245
           P+  T+N ++  LC  G V  A ++L  +   G  PD+ TY+++MDG CK  R +EA+  
Sbjct: 298 PDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKL 357

Query: 246 --ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
             ELL E + +   P+ VTFNT+    C++G   + + ++  M +  C+PD  +Y+ +++
Sbjct: 358 LKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVD 417

Query: 304 GLL-KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           G L K  K   A+ +   MV  G   D     SL  GL       +D +E A  +F ++ 
Sbjct: 418 GFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGL-----SREDEMERAIGMFRRVQ 472

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
                 D   Y  ++  L K  +TD A+    + +  G +P   T+  +++ +  EG ++
Sbjct: 473 AMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLE 532

Query: 423 KALLLL 428
           +A  LL
Sbjct: 533 EAKELL 538



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 166/325 (51%), Gaps = 10/325 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S  K+ + + D ++  G    +  +N L+ A+    +   A+K  +   SYG  P++ 
Sbjct: 207 KESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAV 266

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +++  C+   + EA K++  MF N   P+  TF  ++ SLC+ G +  A +VL QM
Sbjct: 267 TYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQM 326

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAY----EMLMNVKNDGLKPDVYTYTAVMDGFCK 237
              GC P+I TY+ ++ GLC   RV+EA     E+L  + +    PD  T+  ++   C+
Sbjct: 327 SEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQ 386

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY-CKEGTPMKGVGLLKLMKKRNCLPDKI 296
            G  + A+++++E  E G  P++ T+N + +G+ CK     + + LL LM      PD  
Sbjct: 387 KGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTT 446

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y +L  GL +  ++  A+ +F+ +   G   D+ + N++L GLC K W   DL   A  
Sbjct: 447 TYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLC-KKW-RTDL---AID 501

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLG 381
            F  M     + D  TY I++  + 
Sbjct: 502 FFAYMVSNGCMPDESTYIILVEGIA 526



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 177/382 (46%), Gaps = 41/382 (10%)

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +R    + +   A +++  +  +G  P V    IL+  LC  GR+ +A  V++ +G    
Sbjct: 68  LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGP--- 124

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
              I TYN ++ G C  G ++ A  M+ +V      PD +TY  ++   C  G   +A+ 
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDALA 181

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           + ++ + RG +P+VVT++ L +  CKE    + V LL  M+ + C PD ++Y+ L+N + 
Sbjct: 182 VFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKD---------------- 349
             G +  A+ +   +  +G + D      +L+ LC  + WEE D                
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEV 301

Query: 350 -------------LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH-- 394
                         +  A +V  +M++     D  TY  ++  L K ++ DEA+  L   
Sbjct: 302 TFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKEL 361

Query: 395 --HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK-LD 451
               +    IP  +TFN +I +LC +G  D+A+ ++  M EH  IP  T+Y+ ++   L 
Sbjct: 362 LAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLC 421

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           +  K+ +A  L    +  G+ P
Sbjct: 422 KSCKTEEALDLLNLMVSNGLCP 443



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 36/165 (21%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY-CNKNDFFEARKVIDCM 146
           FN ++ +L      + A+K   E S +G  P+  T++ ++  + C      EA  +++ M
Sbjct: 377 FNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLM 436

Query: 147 FDNGYHPNVTTFT-------------------------------ILVNS----LCKSGRL 171
             NG  P+ TT+                                +L N+    LCK  R 
Sbjct: 437 VSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRT 496

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
             A++    M   GC P+  TY  L++G+ Y G +EEA E+L N+
Sbjct: 497 DLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 178/375 (47%), Gaps = 44/375 (11%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    +   + L+     L+  +  +   S+    GL P+  TF+ ++   C +    + 
Sbjct: 92  GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             + D M   G  PNV T+ +++NSL KSG+  EAL  L QM ++GC PN+  Y+ L+ G
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C  G+++EA  +   + + G  P+VYTYT++M+G+CK+ R  EA++LL+E + +G+ P+
Sbjct: 212 YCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPD 271

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           +VTF T+ +G C+ G P+    L + +      P+ ++Y  LL+GL K G +  A ++F+
Sbjct: 272 IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ 331

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVI 377
           EM R                                          S   P    Y I+I
Sbjct: 332 EMQR------------------------------------------STVKPNLVIYTILI 349

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
            +L K  K  +        I+ G  P   T+  ++ ALC EG I +A  L   M E    
Sbjct: 350 DSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCT 409

Query: 438 PSRTSYDMLITKLDQ 452
           P + +Y+++I    Q
Sbjct: 410 PDKCAYNVIIQGFLQ 424



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 153/309 (49%), Gaps = 5/309 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +   I K G   S+  F  LL  L M  + +  +  + +    GL PN +T++++I  
Sbjct: 117 LSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINS 176

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
                   EA   +  M   G  PNV  ++ L++  C  G++ EA  V D M   GC PN
Sbjct: 177 LSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPN 236

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY  L+ G C + R+EEA ++L      GL PD+ T+T ++ G C+ GR   A +L  
Sbjct: 237 VYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFR 296

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
                G TPN++T+  L +G CK G   +   L + M++    P+ + Y+ L++ L K G
Sbjct: 297 YICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCG 356

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           KI+    +F  ++  G + +     +L+  LC     ++ L+ +A+++F KM +     D
Sbjct: 357 KIKDGKELFSRLIDEGLKPNVYTYTALVGALC-----KEGLIIEAHKLFRKMEEDGCTPD 411

Query: 370 PGTYGIVIR 378
              Y ++I+
Sbjct: 412 KCAYNVIIQ 420



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 138/268 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+    E +     ++K G   +V +++ L+    +  + + A   F    S G  PN +
Sbjct: 179 KSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVY 238

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  YC      EA +++D     G  P++ TFT +++ LC++GR   A ++   +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PNI TY  LL GLC  G +EEA+ +   ++   +KP++  YT ++D  CK G+ 
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +  EL +  I+ G+ PNV T+  L    CKEG  ++   L + M++  C PDK +Y+ +
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVI 418

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           + G L+      A  + +EMV  GF  D
Sbjct: 419 IQGFLQHKDPSMARQLVEEMVNRGFSAD 446



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 162/321 (50%), Gaps = 5/321 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +  F+ L +S+ + G  +  + +  ++  +G + +I + + L+   C++ RV+    +
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   GL+P + T+T +++G C  G+ ++ M L ++ + RG+ PNV T+N + N   K
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   + +G LK M+K  C+P+ ++YSTL++G    G++  A S+F  MV  G   +   
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             SL+ G C     + + +E+A Q+ ++  +K  V D  T+  +I  L +  +   A   
Sbjct: 240 YTSLMNGYC-----KIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQL 294

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
             +    GH P  +T+  ++  LC  G +++A  L   M      P+   Y +LI  L +
Sbjct: 295 FRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCK 354

Query: 453 LEKSYDACALYGAALKQGVIP 473
             K  D   L+   + +G+ P
Sbjct: 355 CGKIKDGKELFSRLIDEGLKP 375



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 156/326 (47%), Gaps = 5/326 (1%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G   ++ + +IL+N  C   R+   L VL ++ ++G +P+I T+  LL GLC  G++++ 
Sbjct: 92  GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             +  ++   GL+P+VYTY  +++   K G++NEA+  L +  + G  PNVV ++TL +G
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YC  G   +   +  LM  + C P+  +Y++L+NG  K  +I  AV +  E +R G   D
Sbjct: 212 YCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPD 271

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                +++ GLC            A Q+F  +       +  TYG+++  L K    +EA
Sbjct: 272 IVTFTTIISGLCRAGRPLA-----AQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEA 326

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
                        P  + +  +I +LC  GKI     L   + +    P+  +Y  L+  
Sbjct: 327 FALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGA 386

Query: 450 LDQLEKSYDACALYGAALKQGVIPQR 475
           L +     +A  L+    + G  P +
Sbjct: 387 LCKEGLIIEAHKLFRKMEEDGCTPDK 412



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 118/236 (50%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   +FD +   G   +V  +  L+     +   E AV+   E    GL P+  TF+ 
Sbjct: 218 MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C       A+++   +  +G+ PN+ T+ +L++ LCK G L+EA  +  +M R  
Sbjct: 278 IISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST 337

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KPN+  Y  L+  LC  G++++  E+   + ++GLKP+VYTYTA++   CK G   EA 
Sbjct: 338 VKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAH 397

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +L  +  E G TP+   +N +  G+ +   P     L++ M  R    D  + + L
Sbjct: 398 KLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 1/215 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E + + D   + G    +  F  ++  L        A + F    ++G  PN  
Sbjct: 249 KIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIM 308

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ +++   C   +  EA  +   M  +   PN+  +TIL++SLCK G++K+  E+  ++
Sbjct: 309 TYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRL 368

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KPN+ TY  L+  LC  G + EA+++   ++ DG  PD   Y  ++ GF +    
Sbjct: 369 IDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDP 428

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           + A +L+ E + RG + +  T   L N +     P
Sbjct: 429 SMARQLVEEMVNRGFSADAAT-RALLNDFPTNDIP 462



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 108/232 (46%), Gaps = 5/232 (2%)

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A+      + R   P +V F+ LF+   + G     V L K ++      D  S S L
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +N      ++   +S+  ++++ G E       +LL GLCM+       ++    +++ M
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGK-----MDQVMMLYDDM 158

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +    +  TY ++I +L K  K +EAL  L    ++G +P  + ++ +I   C  G++
Sbjct: 159 LVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQM 218

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           D+A  +  LM      P+  +Y  L+    ++E+  +A  L    L++G++P
Sbjct: 219 DEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVP 270


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 174/357 (48%), Gaps = 5/357 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           LL  ++  N   T   F+SE   YG  P    ++I+I  +C +    +A+ + + +   G
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             P   +F  L+N LCKS  L E   +   M      P++ TY+ L+ GLC  GR++ A 
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           ++   ++  GL+P+  T+TA++DG C+  R + AM   ++ +  GV P++V +NTL NG 
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G   K   L+  M+     PDKI+Y+TL++G  K G +  A+ I K M   G  +D 
Sbjct: 374 CKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 433

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +L+ G C         + DA +   +M +     D  TY +VI    K        
Sbjct: 434 VAFTALISGFC-----RDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGF 488

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             L      GH P  IT+N ++  LC +G++  A +LL  M      P   +Y++L+
Sbjct: 489 KLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILL 545



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 184/347 (53%), Gaps = 12/347 (3%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F+E    GL P + +F+ +I   C   +  E  ++   M +N  +P+V T+++L++ LCK
Sbjct: 246 FNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK 305

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            GRL  A ++ D+M + G +PN  T+  L+ G C   R++ A      +   G+KPD+  
Sbjct: 306 EGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVM 365

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  +++G CKVG  N+A +L++E    G+ P+ +T+ TL +GYCKEG     + + K M 
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +   + D ++++ L++G  + G++R A    +EMV  G + D+     ++ G C     +
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYC-----K 480

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
           K  ++  +++ ++M  +++   PG  TY +++  L K  +   A + L   + +G  P  
Sbjct: 481 KGNVKMGFKLLKEM--QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDD 538

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           IT+N +++  C  GK +    LL L  E   I     Y  L+++ ++
Sbjct: 539 ITYNILLEGHCKNGKAED---LLKLRNEKGLIVDYAYYTSLVSEYNK 582



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 153/316 (48%), Gaps = 36/316 (11%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF+ I+K G   +   FN L+  L      +   +         + P+ +T+S++I   C
Sbjct: 245 IFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLC 304

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +     A ++ D M   G  PN  TFT L++  C+S R+  A+    QM  +G KP++ 
Sbjct: 305 KEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLV 364

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL---- 247
            YN LL GLC VG V +A +++  ++  G+KPD  TYT ++DG+CK G    AME+    
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 424

Query: 248 -------------------------------LNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                                          L E +E G+ P+  T+  + +GYCK+G  
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 484

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
             G  LLK M+     P  I+Y+ L+NGL K G+++ A  + + M+  G   D+   N L
Sbjct: 485 KMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNIL 544

Query: 337 LRGLCMKSWEEKDLLE 352
           L G C K+ + +DLL+
Sbjct: 545 LEGHC-KNGKAEDLLK 559



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 3/266 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD +++ G   +   F  L+         ++A+  + +  + G+ P+   ++ ++   C
Sbjct: 315 LFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLC 374

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              D  +ARK++D M   G  P+  T+T L++  CK G L+ A+E+   M   G   +  
Sbjct: 375 KVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV 434

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            +  L+ G C  GRV +A   L  +   G+KPD  TYT V+DG+CK G      +LL E 
Sbjct: 435 AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              G  P V+T+N L NG CK+G       LL+ M      PD I+Y+ LL G  K GK 
Sbjct: 495 QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKA 554

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLL 337
              + +  E    G  VD     SL+
Sbjct: 555 EDLLKLRNEK---GLIVDYAYYTSLV 577



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 94/171 (54%), Gaps = 3/171 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E+A++     +  G+  ++  F+ +I  +C      +A + +  M + G  P+  T+T++
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++  CK G +K   ++L +M   G KP + TYN L+ GLC  G+++ A  +L  + N G+
Sbjct: 475 IDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGV 534

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
            PD  TY  +++G CK G++ + ++L N   E+G+  +   + +L + Y K
Sbjct: 535 TPDDITYNILLEGHCKNGKAEDLLKLRN---EKGLIVDYAYYTSLVSEYNK 582



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/212 (21%), Positives = 84/212 (39%), Gaps = 7/212 (3%)

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           F+ L   Y   G     +   +L++  N          LL+ ++         + + E++
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
            +GF    +  N L+   C     ++  + DA  +F ++ K+       ++  +I  L K
Sbjct: 216 EYGFPPKVQYYNILINKFC-----KEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 383 GKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
            +  DE    L   +E   I P   T++ +I  LC EG++D A  L   M +    P+  
Sbjct: 271 SRNLDEGF-RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++  LI    +  +   A   Y   L  GV P
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKP 361


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 192/389 (49%), Gaps = 5/389 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE  D+FD++   G N  V  +N +L               F      G+AP   
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVIC 395

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+++I+ Y N     +A  + + M D+G  PNV T+T ++ +LC+ G++ +A+E  +QM
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM 455

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+   Y+CL++G C  G + +A E++  + N+G+  D+  ++++++  CK+GR 
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  + +  +  G+ P  V ++ L +GYC  G   K + +   M      P+ + Y TL
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG  K G+I   +S+F+EM++ G +    + N ++ GL      E      A   F +M
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF-----EAGRTVPAKVKFHEM 630

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           T+     +  TY IV+R L K +  DEA+        M      IT N +I  +    ++
Sbjct: 631 TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 690

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++A  L   +     +P   +Y ++IT L
Sbjct: 691 EEAKDLFASISRSGLVPCVVTYSIMITNL 719



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 205/437 (46%), Gaps = 30/437 (6%)

Query: 60  RIKASPLK--ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET-------AVKFFSE 110
           R++   L+  E  D+ D +++ GT     D N  L A+               AV  F+ 
Sbjct: 37  RVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAAIARAPSSAACRSGPALAVALFNR 96

Query: 111 ASSYG-----LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           A+S       L+P S T++I++ C    +    A      +   G   ++     L+   
Sbjct: 97  AASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGF 156

Query: 166 CKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LK 222
           C++ R  EAL++L  +   +GC P++ +Y+ LLK LC  G+  +A ++L  +   G    
Sbjct: 157 CEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 216

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           PDV  Y  V+DGF K G  N+A +L  E ++RG+ P+ VT++++ +  CK     K    
Sbjct: 217 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L+ M  +  LP+  +Y+ L+ G    G+ + AV +FKEM R     D    N L+  LC 
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLC- 335

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM--- 399
               +   +++A  VF+ M  K    D  +Y I++     G  T   L+ +    ++   
Sbjct: 336 ----KYGKIKEARDVFDTMAMKGQNPDVFSYNIML----NGYATKGCLVDMTDLFDLMLG 387

Query: 400 -GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G  P   TFN +I+A    G +DKA+++   M +H   P+  +Y  +I  L ++ K  D
Sbjct: 388 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDD 447

Query: 459 ACALYGAALKQGVIPQR 475
           A   +   + QGV P +
Sbjct: 448 AMEKFNQMIDQGVAPDK 464



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 194/424 (45%), Gaps = 40/424 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  D+F  + + G       ++ ++ AL      + A  F  +  + G+ PN+W
Sbjct: 231 KEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNW 290

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  Y +   + EA +V   M      P+V TF +L+ SLCK G++KEA +V D M
Sbjct: 291 TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTM 350

Query: 182 GRIGCKPNIQTYNCLLKGL----CYV-------------------------------GRV 206
              G  P++ +YN +L G     C V                               G +
Sbjct: 351 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGML 410

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           ++A  +   +++ G+KP+V TYT V+   C++G+ ++AME  N+ I++GV P+   ++ L
Sbjct: 411 DKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             G+C  G+ +K   L+  +       D + +S+++N L K G++  A +IF   V  G 
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
                + + L+ G C+    EK     A +VF+ M       +   YG ++    K  + 
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEK-----ALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRI 585

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           DE L      ++ G  P TI +N +I  L   G+   A +    M E     ++ +Y ++
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 645

Query: 447 ITKL 450
           +  L
Sbjct: 646 LRGL 649



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 192/407 (47%), Gaps = 5/407 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE + +F  +++      V  FN L+ +L    + + A   F   +  G  P+ ++++IM
Sbjct: 306 KEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIM 365

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  Y  K    +   + D M  +G  P + TF +L+ +    G L +A+ + ++M   G 
Sbjct: 366 LNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 425

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           KPN+ TY  ++  LC +G++++A E    + + G+ PD Y Y  ++ GFC  G   +A E
Sbjct: 426 KPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKE 485

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L++E +  G+  ++V F+++ N  CK G  M    +  L       P  + YS L++G  
Sbjct: 486 LISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYC 545

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A+ +F  MV  G E ++ +  +L+ G C     +   +++   +F +M +K  
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC-----KIGRIDEGLSLFREMLQKGI 600

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                 Y I+I  L +  +T  A +  H   E G      T++ V++ L      D+A+ 
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 660

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L   +          + + +I  + Q  +  +A  L+ +  + G++P
Sbjct: 661 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 707



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 186/359 (51%), Gaps = 5/359 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + + IF+ ++  G   +V  +  ++ AL  + + + A++ F++    G+AP+ + +  
Sbjct: 410 LDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+ +C      +A+++I  + +NG H ++  F+ ++N+LCK GR+ +A  + D    +G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P    Y+ L+ G C VG++E+A  +   + + G++P+   Y  +++G+CK+GR +E +
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  E +++G+ P+ + +N + +G  + G  +        M +     +K +YS +L GL
Sbjct: 590 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 649

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K      A+ +FKE+     ++D   +N+++ G+      +   +E+A  +F  +++  
Sbjct: 650 FKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF-----QTRRVEEAKDLFASISRSG 704

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            V    TY I+I  L K    +EA          G  P +   N+V++ L  + +I +A
Sbjct: 705 LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 171/371 (46%), Gaps = 5/371 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F E    G+ P+  T+S ++   C      +A   +  M + G  PN  T+  L+ 
Sbjct: 238 ACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIY 297

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
               +G+ KEA+ V  +M R    P++ T+N L+  LC  G+++EA ++   +   G  P
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV++Y  +++G+   G   +  +L +  +  G+ P + TFN L   Y   G   K + + 
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIF 417

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M+     P+ ++Y+T++  L + GK+  A+  F +M+  G   D+   + L++G C  
Sbjct: 418 NEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTH 477

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                 LL+    + E M   + + D   +  +I  L K  +  +A       + +G  P
Sbjct: 478 G----SLLKAKELISEIMNNGMHL-DIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 532

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             + ++ ++   C  GK++KAL +   M      P+   Y  L+    ++ +  +  +L+
Sbjct: 533 TAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLF 592

Query: 464 GAALKQGVIPQ 474
              L++G+ P 
Sbjct: 593 REMLQKGIKPS 603



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 94/214 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F  + + G   S   +N ++  L        A   F E +  G+A N  
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 640

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI++R       F EA  +   +       ++ T   ++  + ++ R++EA ++   +
Sbjct: 641 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 700

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  P + TY+ ++  L   G VEEA +M  +++N G +PD      V+    K    
Sbjct: 701 SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 760

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
             A   L++  ER  +   +T   L + +  +GT
Sbjct: 761 VRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGT 794



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/147 (21%), Positives = 63/147 (42%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A+  F E  +  +  +  T + MI          EA+ +   +  +G  P V T++I+
Sbjct: 656 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIM 715

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + +L K G ++EA ++   M   GC+P+ +  N +++ L     +  A   L  +     
Sbjct: 716 ITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF 775

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELL 248
             +  T   ++D F   G   E +  L
Sbjct: 776 SLEHLTTMLLVDLFSSKGTCREHIRFL 802


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 223/469 (47%), Gaps = 29/469 (6%)

Query: 19  NHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKK 78
           +H     F+ L    AA L  + S           A R  D ++A     R+D F S   
Sbjct: 115 SHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAF---SRMDEFQS--- 168

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
                +   +N +L ALV       A+  ++   + G APN  T+++++   C +    +
Sbjct: 169 ---RPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGD 225

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A K+ D M D G  PNV  +T+L++SLC +G++ EA+++L  M   GC P+  TYN  L 
Sbjct: 226 ALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLS 285

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC VGRV EA++ L+ +++ G    +  Y+ ++DG  +  R +E        +ER ++P
Sbjct: 286 GLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP 345

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           +VV +  +  G  + G     +  L +MKK+  +PD   Y+T+L  L   G +  A ++ 
Sbjct: 346 DVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLR 405

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
            EM++    +D      ++ GLC     ++ L+++A Q+F++M +        TY  +I 
Sbjct: 406 SEMLQNNLVLDSTTQTIMICGLC-----KRGLVDEAMQIFDEMGEHGCDPTVMTYNALID 460

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPR-----TITFNNV---------IQALCGEGKIDKA 424
              +  + +EA + L H +EMG+ P      T+  N V         +  +C  G++ KA
Sbjct: 461 GFYREGRLEEARM-LFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKA 519

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             LL  + +   +P   +Y+ LI  L +      A  L+     +G+ P
Sbjct: 520 YKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISP 568



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 195/409 (47%), Gaps = 9/409 (2%)

Query: 23  IPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTN 82
           IP  ++L +F    L +A S  L+  P    A   + R+ +   +   D     +  G  
Sbjct: 79  IPAASRLRLF----LFSALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLP 134

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
            S S F  L+ A         AV+ FS    +   P ++ ++ +++   +      A  +
Sbjct: 135 ASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALAL 194

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
            + M   G  PN  T+ +L++ LCK G   +AL++ D+M   G  PN++ Y  LL  LC 
Sbjct: 195 YNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCN 254

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            G+++EA ++L ++K+ G  PD  TY A + G CKVGR NEA + L    + G    +  
Sbjct: 255 AGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKG 314

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           ++ L +G  +     +G G  K M +RN  PD + Y+ ++ G  + G+I  A+S    M 
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
           + GF  D    N++L+ LC    +  D LE A+ +  +M +   V D  T  I+I  L K
Sbjct: 375 KKGFVPDTFCYNTVLKVLC----DHGD-LERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
               DEA+       E G  P  +T+N +I     EG++++A +L   M
Sbjct: 430 RGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 187/406 (46%), Gaps = 46/406 (11%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A+ F       G  P+++ ++ +++  C+  D   A  +   M  N    + TT TI+
Sbjct: 364 EDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIM 423

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +  LCK G + EA+++ D+MG  GC P + TYN L+ G    GR+EEA  ML +    G 
Sbjct: 424 ICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA-RMLFHKMEMGN 482

Query: 222 KPDVY--------------TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            P ++              +   ++   C+ G+  +A +LL   I+ GV P+VVT+NTL 
Sbjct: 483 NPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG CK       V L K ++ +   PD+I+Y TL++GLL+  +   A+ +F+ +++ G  
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS 602

Query: 328 VDERMMNSLLRGLC-MKS-------W-----------EEKDLLEDAYQVFE--------- 359
               + NS++R LC MK        W            E ++L +A++  E         
Sbjct: 603 PSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVR 662

Query: 360 ---KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
              K+ ++        Y I +  L + ++TD+AL   H   E G          +I  LC
Sbjct: 663 ELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLC 722

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
            +  ++ A+ ++      + I S+   + L+  L    +  DA AL
Sbjct: 723 WDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQAL 768



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 46/267 (17%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A K        G+ P+  T++ +I   C   +   A ++   +   G  P+  T+  L++
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLID 578

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY------------- 210
            L ++ R  +A+ +   + + G  P++  YN +++ LC + ++ +A              
Sbjct: 579 GLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNF 638

Query: 211 ----EMLMNVK--------NDGLKPDVYT-----------YTAVMDGFCKVGRSNEAMEL 247
               E+L N          +DG++  +             YT  + G C+V R+++A+ +
Sbjct: 639 PVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRI 698

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG-LLKLMKKRNCLPDKISYSTLLNGLL 306
            +   E G+         L N  C +      V  +L  + K   L   +      N LL
Sbjct: 699 FHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVG-----NRLL 753

Query: 307 KWGKI----RPAVSIFKEMVRFGFEVD 329
           +W  I    + A ++   M   G+++D
Sbjct: 754 RWLCICYRRQDAQALAWRMHLVGYDMD 780


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 208/413 (50%), Gaps = 21/413 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N  L A V  +    AV  ++  +  G   + P+  T+ I+I 
Sbjct: 37  VFDELLRRGRGASIYGLNRAL-ADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
           C C           +  +   G+  +   FT L+  LC   R  +A++ VL +M  +GC 
Sbjct: 96  CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---GLKPDVYTYTAVMDGFCKVGRSNEA 244
           PN+ +YN LLKGLC   R +EA E+L  + +D   G  PDV +YT V++GF K G S++A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
               +E ++RG+ P+VVT+N++    CK     K + +L  M K   +PD ++Y+++L+G
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
               G+ + A+   K+M   G E D    + L+  LC     +     +A ++F+ MTK+
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLC-----KNGRCMEARKIFDSMTKR 330

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGK 420
               +  TYG    TL +G  T  AL+ +H  +++    G  P    F+ +I A   +GK
Sbjct: 331 GLKPEITTYG----TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGK 386

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +D+A+L+   M +    P+  +Y  +I  L +  +  DA   +   + +G+ P
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 188/391 (48%), Gaps = 14/391 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IFDS+ K G    ++ +  LL                      G+ P+ + FSI+I  Y 
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N+    +A  V   M   G +PN  T+  ++  LCKSGR+++A+   +QM   G  P   
Sbjct: 383 NQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            YN L+ GLC   + E A E+++ + + G+  +   + +++D  CK GR  E+ +L    
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  GV PNV+T+NTL NGYC  G   + + LL  M      P+ ++YSTL+NG  K  ++
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ +FKEM   G   D    N +L+GL             A +++ ++T+  +  +  
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA-----AKELYVRITESGTQIELS 617

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY I++  L K K TD+AL    +   M       TFN +I AL   G+ D+A  L    
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677

Query: 432 YEHAKIPSRTSYDM---------LITKLDQL 453
             +  +P+  +Y +         L+ +LDQL
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 201/410 (49%), Gaps = 11/410 (2%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     ++ DG    V  ++ L+  L        A K F   +  GL P   T+  +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG HP+   F+IL+ +    G++ +A+ V  +M + G 
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGL 402

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN  TY  ++  LC  GRVE+A      + ++GL P    Y +++ G C   +   A E
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E ++RG+  N + FN++ + +CKEG  ++   L +LM +    P+ I+Y+TL+NG  
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A+ +   MV  G + +    ++L+ G C  S      +EDA  +F++M     
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR-----MEDALVLFKEMESSGV 577

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY I+++ L + ++T  A        E G      T+N ++  LC     D AL 
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 427 L---LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   L LM    K+ +RT ++++I  L ++ ++ +A  L+ A    G++P
Sbjct: 638 MFQNLCLM--DLKLEART-FNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 684



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 211/467 (45%), Gaps = 58/467 (12%)

Query: 58  VDRIKASPL-------KERIDIFDSIKKDGTNW----SVSDFNDLLMALVMLNEQETAVK 106
           VD I  +PL       K   D  D + +  T      +V  +N LL  L   N  + A++
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALE 179

Query: 107 FF---SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
                ++    G  P+  +++ +I  +  + D  +A      M D G  P+V T+  ++ 
Sbjct: 180 LLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIA 239

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK+  + +A+EVL+ M + G  P+  TYN +L G C  G+ +EA   L  +++DG++P
Sbjct: 240 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEP 299

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV TY+ +MD  CK GR  EA ++ +   +RG+ P + T+ TL  GY  +G  ++  GLL
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359

Query: 284 KLMKKRNCLPDK-----------------------------------ISYSTLLNGLLKW 308
            LM +    PD                                    ++Y  ++  L K 
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEEKDLLEDAYQVFEKMTKKVSV 367
           G++  A+  F++M+  G      + NSL+ GLC    WE  + L     + E + + + +
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL-----ILEMLDRGICL 474

Query: 368 TDPGTYGIVIRTLGKGKKTD-EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                  I+     +G+  + E L  L   + +G  P  IT+N +I   C  GK+D+A+ 
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFEL--MVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LL  M      P+  +Y  LI    ++ +  DA  L+      GV P
Sbjct: 533 LLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 152/319 (47%), Gaps = 5/319 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  +++ +  F+ +  +G +     +N L+  L   N+ E A +   E    G+  N+ 
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  +C +    E+ K+ + M   G  PNV T+  L+N  C +G++ EA+++L  M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G KPN  TY+ L+ G C + R+E+A  +   +++ G+ PD+ TY  ++ G  +  R+
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A EL     E G    + T+N + +G CK       + + + +   +   +  +++ +
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM 657

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ LLK G+   A  +F       F  +  + N     L  ++   + LLE+  Q+F  M
Sbjct: 658 IDALLKVGRNDEAKDLF-----VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 712

Query: 362 TKKVSVTDPGTYGIVIRTL 380
                  D G    ++R L
Sbjct: 713 EDNGCTVDSGMLNFIVREL 731



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 147/344 (42%), Gaps = 48/344 (13%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK---PNIQTYN 194
           +AR V D +   G   ++      +  + +      A+   ++M R G     P++ TY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEAIE 253
            L+   C  GR++  +  L NV   G + D   +T ++ G C   R+++AM++ L    E
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM---KKRNCLPDKISYSTLLNGLLKWGK 310
            G  PNV ++N L  G C E    + + LL +M   +     PD +SY+T++NG  K G 
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
                                                    + AY  + +M  +  + D 
Sbjct: 212 S----------------------------------------DKAYSTYHEMLDRGILPDV 231

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I  L K +  D+A+  L+  ++ G +P  +T+N+++   C  G+  +A+  L  
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           M      P   +Y +L+  L +  +  +A  ++ +  K+G+ P+
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 117/243 (48%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ + + G   +V  +N L+    +  + + A+K  S   S GL PN+ T+S +I  YC
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             +   +A  +   M  +G  P++ T+ I++  L ++ R   A E+  ++   G +  + 
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN +L GLC     ++A +M  N+    LK +  T+  ++D   KVGR++EA +L    
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              G+ PN  T+  +      +G   +   L   M+   C  D    + ++  LL+ G+I
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737

Query: 312 RPA 314
             A
Sbjct: 738 TRA 740



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/262 (20%), Positives = 120/262 (45%), Gaps = 8/262 (3%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + E + +   +   G   +   ++ L+     ++  E A+  F E  S G++P+  T
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+++          A+++   + ++G    ++T+ I+++ LCK+    +AL++   + 
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLC 643

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
            +  K   +T+N ++  L  VGR +EA ++ +   ++GL P+ +TY  + +     G   
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           E  +L     + G T +    N +     + G   +    L ++ +++    + S ++L 
Sbjct: 704 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH-FSLEASTASLF 762

Query: 303 NGLLKWGKIRPAVSIFKEMVRF 324
             LL  GK       ++E  RF
Sbjct: 763 IDLLSGGK-------YQEYYRF 777


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 217/435 (49%), Gaps = 35/435 (8%)

Query: 51  SLQAQRFV----DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           SLQA   V     R  ++  +  +D+F S+ +   + +   FN L+           A+ 
Sbjct: 170 SLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALA 229

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
             S    +GL+P++ T++ ++  +C K    EAR ++  M  +G  P   T+  LV++  
Sbjct: 230 TLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFA 289

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK-PDV 225
           + G +K+A +V++ M   G +P+++TYN L  GLC  G+V+EA+ +   ++  G   PDV
Sbjct: 290 RLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDV 349

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            TY  ++D   K   S++A+ LL E  ++GV P +VT N +    CKEG   + +G L+ 
Sbjct: 350 VTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEK 409

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKS 344
           + +    PD I+Y+TL++   K G +  A ++  EMV  G ++D   +N++L  LC MK 
Sbjct: 410 IAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKR 469

Query: 345 WEEKDLL-----------------------------EDAYQVFEKMTKKVSVTDPGTYGI 375
           +E+ + L                             E A +++++M ++  +    TY  
Sbjct: 470 YEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNT 529

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I+ L + ++  EA+  L+  +E G +P   T+N +I A C EG ++ A      M E++
Sbjct: 530 LIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENS 589

Query: 436 KIPSRTSYDMLITKL 450
             P   + + L+  L
Sbjct: 590 FKPDVVTCNTLMNGL 604



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 193/395 (48%), Gaps = 6/395 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA-PNSWTFS 124
           +K+   + +S+   G    +  +N L M L    + + A +   E    G A P+  T++
Sbjct: 294 IKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYN 353

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            ++          +A ++++ M D G  P + T  I+V SLCK G+L+EAL  L+++   
Sbjct: 354 TLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEE 413

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  P++ TYN L+   C  G V +A+ ++  +   GLK D +T   V+   CK+ R  +A
Sbjct: 414 GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDA 473

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            ELL+   +RG  P+ V++ T+   Y KE  P   + L   M +R  +P   +Y+TL+ G
Sbjct: 474 EELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKG 533

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L +  +++ A+    E V  G   DE   N ++   C    +E D LE+A++   KM + 
Sbjct: 534 LCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYC----KEGD-LENAFRFHNKMVEN 588

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  T   ++  L    K D+AL      +E G     IT+N +IQ++C  G +D A
Sbjct: 589 SFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTA 648

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           L     M      P   +Y+++++ L +  +S +A
Sbjct: 649 LHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 194/410 (47%), Gaps = 45/410 (10%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQ--ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           ++ G   S+   N +L AL        + ++  F       L PN +TF++++  +C+K 
Sbjct: 163 RRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKG 222

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL----------------------- 171
              +A   +  M   G  P+  T+  L+N+ C+ G L                       
Sbjct: 223 TLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYN 282

Query: 172 ------------KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
                       K+A +V++ M   G +P+++TYN L  GLC  G+V+EA+ +   ++  
Sbjct: 283 TLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERL 342

Query: 220 GLK-PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           G   PDV TY  ++D   K   S++A+ LL E  ++GV P +VT N +    CKEG   +
Sbjct: 343 GTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEE 402

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            +G L+ + +    PD I+Y+TL++   K G +  A ++  EMV  G ++D   +N++L 
Sbjct: 403 ALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLY 462

Query: 339 GLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            LC MK +      EDA ++     ++  V D  +YG V+    K    + AL      I
Sbjct: 463 NLCKMKRY------EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMI 516

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           E   IP   T+N +I+ LC   ++ +A+  L    E   +P  T+Y+++I
Sbjct: 517 ERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIII 566



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 138/301 (45%), Gaps = 5/301 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E +   + I ++G    V  +N L+ A         A     E    GL  +++
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T + ++   C    + +A +++      G+ P+  ++  ++ +  K    + AL + DQM
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P+I TYN L+KGLC + R++EA + L      GL PD  TY  ++  +CK G  
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDL 575

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A    N+ +E    P+VVT NTL NG C  G   K + L +   ++    D I+Y+TL
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTL 635

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  + K G +  A+  F +M   G + D    N +L  L      E    E+A+ +  K+
Sbjct: 636 IQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSAL-----SEAGRSEEAHNMLHKL 690

Query: 362 T 362
            
Sbjct: 691 A 691



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 11/249 (4%)

Query: 230 AVMDGFCKVGRSNEAMELLNE-AIERGVTPNVVTFNTLFNGYCKEGT--PMKGVGLLKLM 286
           A +  + ++   + A +LL+     RGV P++   N + +   +  +  P   + + + +
Sbjct: 140 AALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSL 199

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            +    P+  +++ L++     G +  A++    M  FG   D    N+LL   C     
Sbjct: 200 IELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHC----- 254

Query: 347 EKDLLEDAYQVFEKMTKK-VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            K +L +A  +  +M +  ++ T P TY  ++    +     +A   +      G  P  
Sbjct: 255 RKGMLGEARALLARMKRDGIAPTQP-TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDL 313

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYE-HAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            T+N +   LC  GK+D+A  L   M      +P   +Y+ L+    +   S DA  L  
Sbjct: 314 RTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLE 373

Query: 465 AALKQGVIP 473
               +GV P
Sbjct: 374 EMRDKGVKP 382


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 206/441 (46%), Gaps = 37/441 (8%)

Query: 65  PLKERIDIFDS-IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           P   R  ++   + +D    +   F     AL  L   + A+      + +G  P++  +
Sbjct: 138 PRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLY 197

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
             +I   C++    EA  +++ M   G   +V TF  +V  +C  GR++EA  ++D+M  
Sbjct: 198 QTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMT 257

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN------------------------- 218
            GC P + TY  LL+GLC V + +EA  ML  V                           
Sbjct: 258 KGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATEL 317

Query: 219 ------DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
                  G +PD +TY+ +M G CK+GR   A+ LL E  ++G  PNVVT+  + + +CK
Sbjct: 318 YETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 377

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G       LL+ M  +    +   Y+ ++  L K G++  A+ + +EM   G   D   
Sbjct: 378 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 437

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N+++  LC       + +E+A  +FE + ++  V +  TY  +I  L +  +  +A+  
Sbjct: 438 YNTIIYHLC-----NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 492

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
               I  G     +++N +I+A+C +G +D++L+LL  M E    P+  SY++LI++L +
Sbjct: 493 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 552

Query: 453 LEKSYDACALYGAALKQGVIP 473
             +  DA  L    L QG+ P
Sbjct: 553 ERRVRDALELSKQMLNQGLAP 573



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 187/406 (46%), Gaps = 48/406 (11%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V+ F+D++  +  L     A +      + G  P   T+  +++  C      EA
Sbjct: 224 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA 283

Query: 140 RKVIDCMFDNGYHP--NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           R ++      G  P  NV  F  ++      G+L EA E+ + MG  GC+P+  TY+ L+
Sbjct: 284 RAML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILM 337

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            GLC +GR+  A  +L  ++  G  P+V TYT V+  FCK G  ++   LL E   +G+T
Sbjct: 338 HGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLT 397

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD----------------------- 294
            N   +N +    CK+G   + +GL++ M+ + C PD                       
Sbjct: 398 LNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 457

Query: 295 ------------KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
                        I+Y+T+++ LL+ G+ + AV + KEM+  G  +D    N L++ +C 
Sbjct: 458 FENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 517

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
               ++ L+     + E+M +K    +  +Y I+I  L K ++  +AL      +  G  
Sbjct: 518 DGNVDRSLV-----LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLA 572

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           P  +T+N +I  LC  G +  AL LL  ++     P   +Y++LI+
Sbjct: 573 PDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 618



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 170/332 (51%), Gaps = 5/332 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++++++   G       ++ L+  L  L    +AV+   E    G APN  T++I
Sbjct: 311 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTI 370

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  +C    + + R +++ M   G   N   +  ++ +LCK GR+ EA+ ++ +M   G
Sbjct: 371 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 430

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P+I +YN ++  LC   ++EEA  M  N+  +G+  +  TY  ++    + GR  +A+
Sbjct: 431 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 490

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  E I  G + +VV++N L    CK+G   + + LL+ M ++   P+ +SY+ L++ L
Sbjct: 491 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 550

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++R A+ + K+M+  G   D    N+L+ GLC   W     +  A  + EK+  + 
Sbjct: 551 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW-----MHAALNLLEKLHNEN 605

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
              D  TY I+I    K +  D+A + L+ A+
Sbjct: 606 VHPDIITYNILISWHCKVRLLDDAAMLLNRAM 637


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 199/403 (49%), Gaps = 6/403 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + + G +     F  L++      + E      +    YG + ++ T ++++R  C
Sbjct: 60  VFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLC 119

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            K  F +  +    M + G  PNV  +T  ++ LCK   +K+A  VL++M   G KPN+ 
Sbjct: 120 EKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVY 179

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           T+  L+ GLC +G  E A+ + +  +K+   KP+V+TYT ++ G+C+ G+   A  LL  
Sbjct: 180 THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVR 239

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +E+G+ PN  T+ TL  G+CK G+  +   L+  MK+   LP+  +Y+ +++G  K GK
Sbjct: 240 MVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGK 299

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I+ A  + +     G + D+     L+   C     ++  +  A  +F++M +     D 
Sbjct: 300 IQEAYKVLRMATSQGLKFDKITYTILITEHC-----KQGHITYALDLFDRMVENGCCPDI 354

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             Y  +I T  + ++ +E+       + +G +P   T+ ++I   C  G+   AL +   
Sbjct: 355 EAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFER 414

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M ++       +Y  LI+ L +  +  +A ALY   L + ++P
Sbjct: 415 MVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP 457



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 189/399 (47%), Gaps = 10/399 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            K+  + F  + + GT  +V ++   +  L      + A     E    GL PN +T + 
Sbjct: 124 FKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 183

Query: 126 MIRCYCNKNDFFEA-RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           +I   C       A R  +  +  + Y PNV T+T+++   C+ G+L  A  +L +M   
Sbjct: 184 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 243

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G KPN  TY  L+ G C  G  + A+E++  +K +G  P++YTY AV+DGFCK G+  EA
Sbjct: 244 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 303

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            ++L  A  +G+  + +T+  L   +CK+G     + L   M +  C PD  +Y++L++ 
Sbjct: 304 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIST 363

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             +  ++  +   F + +  G    ++   S++ G C      +  L  A +VFE+M + 
Sbjct: 364 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVG---RSTL--ALRVFERMVQN 418

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TYG +I  L K  + +EA       ++   +P  +T   +    C   K   A
Sbjct: 419 GCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIA 478

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           + +L  + +  ++    + D+++ KL  L    DA +L+
Sbjct: 479 VSVLDRLDKRQQVH---TVDVVVRKLSAL-GDVDAASLF 513



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 12/362 (3%)

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           E  S+GL     T + ++R       F  ARKV D M   G  P    F  LV   C+ G
Sbjct: 28  EMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREG 87

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +++E   +L  M R G   +  T   +++ LC  GR ++  E    +   G  P+V  YT
Sbjct: 88  KVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYT 147

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL-LKLMKK 288
           A +DG CK     +A  +L E + RG+ PNV T  TL +G CK G   +   L LKL+K 
Sbjct: 148 AWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKS 207

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
            +  P+  +Y+ ++ G  + GK+  A  +   MV  G + +     +L+ G C     + 
Sbjct: 208 SSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHC-----KG 262

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
              + A+++  KM ++  + +  TY  VI    K  K  EA   L  A   G     IT+
Sbjct: 263 GSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITY 322

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT------KLDQLEKSYDACAL 462
             +I   C +G I  AL L   M E+   P   +Y  LI+      ++++ +K +D C +
Sbjct: 323 TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 382

Query: 463 YG 464
            G
Sbjct: 383 IG 384



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 138/305 (45%), Gaps = 8/305 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K        ++ + +K++G   ++  +N ++       + + A K    A+S GL  +  
Sbjct: 261 KGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKI 320

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I  +C +     A  + D M +NG  P++  +T L+++ C+  +++E+ +  D+ 
Sbjct: 321 TYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKC 380

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             IG  P  QTY  ++ G C VGR   A  +   +  +G   D  TY A++ G CK  R 
Sbjct: 381 LMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRL 440

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L    +++ + P  VT  TL   YC+       V +L  + KR  +    +   +
Sbjct: 441 EEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVH---TVDVV 497

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  L   G +  A    K+++   + VD       +      S  E +    A ++ EK 
Sbjct: 498 VRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFI-----NSCYENNRYALASEMSEKF 552

Query: 362 TKKVS 366
           +KK+S
Sbjct: 553 SKKIS 557



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 140/347 (40%), Gaps = 41/347 (11%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           M+  +       EA  ++  M  +G    V T   ++    ++G    A +V D M R G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P  + +  L+   C  G+VEE   +L  +   G   D  T T V+   C+ GR  +  
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E     +E G  PNVV                                   +Y+  ++GL
Sbjct: 129 EFFRRMLETGTPPNVV-----------------------------------NYTAWIDGL 153

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K   ++ A  + +EMV  G + +     +L+ GLC   W E+     A+++F K+ K  
Sbjct: 154 CKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER-----AFRLFLKLIKSS 208

Query: 366 SVT-DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           S   +  TY ++I    +  K   A + L   +E G  P T T+  +I   C  G  D+A
Sbjct: 209 SYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRA 268

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
             L+  M +   +P+  +Y+ +I    +  K  +A  +   A  QG+
Sbjct: 269 FELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGL 315



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 57/123 (46%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           +  K   +   +D+FD + ++G    +  +  L+       + E + KFF +    GL P
Sbjct: 328 EHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLP 387

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
              T++ MI  YC       A +V + M  NG   +  T+  L++ LCK  RL+EA  + 
Sbjct: 388 TKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALY 447

Query: 179 DQM 181
           + M
Sbjct: 448 EGM 450


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 211/441 (47%), Gaps = 31/441 (7%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A   ++   + + +++ G   SV  FN +L  L    + + A+  F E       PNS T
Sbjct: 198 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSST 256

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I   C      EA +++D M      PN+ T  I+V+ LCK+ +L+EA ++ +   
Sbjct: 257 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 316

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           + GC P+  TY  L+ GL   G+V+EAY +   + + G   +   YT+++  F   GR  
Sbjct: 317 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 376

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +  ++  E I RG  P++   NT  +   K G   KG  + + ++    LPD  SYS L+
Sbjct: 377 DGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 436

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-----------MKSWEEK--- 348
           +GL K G+ R   +IF  M + GF +D R  N+++ G C           ++  +EK   
Sbjct: 437 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 496

Query: 349 ----------------DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
                           D L++AY +FE+   K    +   Y  +I   GK  + DEA + 
Sbjct: 497 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 556

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L   ++ G  P   T+N+++ AL    +I++AL+    M E    P+  +Y +LI  L +
Sbjct: 557 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 616

Query: 453 LEKSYDACALYGAALKQGVIP 473
           ++K   A   +    KQG++P
Sbjct: 617 VQKYNKAFVFWQDMQKQGLVP 637



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 209/439 (47%), Gaps = 6/439 (1%)

Query: 36  SLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMA 94
           +LS  E +     P S      +D +     ++E   I D ++      ++   N ++  
Sbjct: 239 ALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDR 298

Query: 95  LVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPN 154
           L    + E A K F  AS  G  P+  T+  +I     K    EA ++ + M D G++ N
Sbjct: 299 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 358

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
              +T L+ +    GR ++  +V  ++ R GCKP++   N  +  +   G VE+   +  
Sbjct: 359 PVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 418

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
           ++++ G  PDV +Y+ ++ G  K G++ E   + +   ++G   +   +N + +G+CK G
Sbjct: 419 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 478

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              K   +L+ MK++   P   +Y  +++GL K  ++  A  +F+E    G E++  + +
Sbjct: 479 KVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYS 538

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           SL+ G     + +   +++AY + E+M KK    +  T+  ++  L K ++ +EAL+   
Sbjct: 539 SLIDG-----FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 593

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
              EM   P T T++ +I  LC   K +KA +    M +   +P+  +Y  +I+ L ++ 
Sbjct: 594 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 653

Query: 455 KSYDACALYGAALKQGVIP 473
              DA +L+      G IP
Sbjct: 654 NITDAYSLFERFKANGGIP 672



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 158/318 (49%), Gaps = 5/318 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  + + G    ++  N  +  +    E E     F +  SYG  P+  ++SI+I    
Sbjct: 381 VFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 440

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 E   +   M   G+  +   +  +V+  CKSG++ +A E+L++M     +P + 
Sbjct: 441 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVA 500

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  ++ GL  + R++EAY +    K+ G++ +V  Y++++DGF KVGR +EA  +L E 
Sbjct: 501 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 560

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+TPNV T+N+L +   K     + +   + MK+  C P+  +YS L+NGL +  K 
Sbjct: 561 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKY 620

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A   +++M + G   +     +++ GL      +   + DAY +FE+      + D  
Sbjct: 621 NKAFVFWQDMQKQGLVPNVVTYTTMISGLA-----KVGNITDAYSLFERFKANGGIPDAA 675

Query: 372 TYGIVIRTLGKGKKTDEA 389
           ++  +I  +    +  EA
Sbjct: 676 SFNALIEGMSNANRAMEA 693



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 190/412 (46%), Gaps = 6/412 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  L     VDR+ KA  L+E   IF+S  + G N     +  L+  L    + + A + 
Sbjct: 287 PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 346

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F +    G   N   ++ +IR +       +  KV   +   G  P++T     ++ + K
Sbjct: 347 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFK 406

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G +++   + + +   G  P++++Y+ L+ GL   G+  E   +   +K  G   D   
Sbjct: 407 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 466

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y AV+DGFCK G+ ++A E+L E  E+ V P V T+  + +G  K     +   L +  K
Sbjct: 467 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 526

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            +    + + YS+L++G  K G+I  A  I +EM++ G   +    NSLL  L +K+ E 
Sbjct: 527 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDAL-VKAEE- 584

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
              + +A   F+ M +     +  TY I+I  L + +K ++A +      + G +P  +T
Sbjct: 585 ---INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 641

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           +  +I  L   G I  A  L      +  IP   S++ LI  +    ++ +A
Sbjct: 642 YTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 693



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 175/369 (47%), Gaps = 6/369 (1%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP  +     +D + K   + E   +F+ +   G N +   +  L+    +   +E   K
Sbjct: 321 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 380

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F E    G  P+    +  + C     +  + R + + +   G+ P+V +++IL++ L 
Sbjct: 381 VFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 440

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K+G+ +E   +   M + G   + + YN ++ G C  G+V +AYE+L  +K   ++P V 
Sbjct: 441 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVA 500

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY A++DG  K+ R +EA  L  EA  +G+  NVV +++L +G+ K G   +   +L+ M
Sbjct: 501 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 560

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            K+   P+  ++++LL+ L+K  +I  A+  F+ M       +    + L+ GLC     
Sbjct: 561 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKY 620

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
            K     A+  ++ M K+  V +  TY  +I  L K     +A          G IP   
Sbjct: 621 NK-----AFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 675

Query: 407 TFNNVIQAL 415
           +FN +I+ +
Sbjct: 676 SFNALIEGM 684



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/502 (22%), Positives = 202/502 (40%), Gaps = 65/502 (12%)

Query: 35  ASLSTAESLDLKENPRSLQAQRFVDRIKASPLKER-IDIFDSIKKDGTNWSVSDFNDLLM 93
           A L+ A    LK  P        +  +  +   ER +++   +++ G    V  F  L+ 
Sbjct: 29  AVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVR 88

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
           AL    +   A+    E     L P+   +++ I C+    +   A K    +   G  P
Sbjct: 89  ALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKP 148

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           +  ++T ++  LCK+GRL EA E+  QM      P    YN ++ G    GR E+AY++L
Sbjct: 149 DDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLL 208

Query: 214 MNVKNDGLKPDVY----------------------------------TYTAVMDGFCKVG 239
             ++  G  P V                                   TY  ++D  C  G
Sbjct: 209 ERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGG 268

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R  EA  +L+E     + PN++T N + +  CK     +   + +   +R C PD ++Y 
Sbjct: 269 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 328

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE------KDLL-- 351
           +L++GL K G++  A  +F++M+  G   +  +  SL+R   +   +E      K+L+  
Sbjct: 329 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRR 388

Query: 352 ----------------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                                 E    +FE +     + D  +Y I+I  L K  +  E 
Sbjct: 389 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 448

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
               H   + G       +N V+   C  GK+ KA  +L  M E    P+  +Y  ++  
Sbjct: 449 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 508

Query: 450 LDQLEKSYDACALYGAALKQGV 471
           L ++++  +A  L+  A  +G+
Sbjct: 509 LAKIDRLDEAYMLFEEAKSKGI 530



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 178/384 (46%), Gaps = 6/384 (1%)

Query: 90  DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
           DL  ALV     + AV   +        P    ++++I           A +++  M + 
Sbjct: 15  DLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEV 74

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           GY   V  FT LV +L + G++ +AL ++D++     +P+I  YN  +      G V+ A
Sbjct: 75  GYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMA 134

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            +    +K  GLKPD  +YT+++   CK GR  EA EL  +       P    +NT+  G
Sbjct: 135 CKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMG 194

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           Y   G       LL+ +++R C+P  +S++++L  L K  K+  A+S+F E+++   E +
Sbjct: 195 YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPN 253

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N ++  LC+        +E+AY++ ++M       +  T  I++  L K +K +EA
Sbjct: 254 SSTYNIIIDMLCLGGR-----VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA 308

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
                 A + G  P  +T+ ++I  L  +G++D+A  L   M +     +   Y  LI  
Sbjct: 309 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 368

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
                +  D   ++   +++G  P
Sbjct: 369 FFIHGRKEDGHKVFKELIRRGCKP 392



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 84/185 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   +F+  K  G   +V  ++ L+     +   + A     E    GL PN +
Sbjct: 511 KIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 570

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++       +  EA      M +    PN  T++IL+N LC+  +  +A      M
Sbjct: 571 TWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDM 630

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  PN+ TY  ++ GL  VG + +AY +    K +G  PD  ++ A+++G     R+
Sbjct: 631 QKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRA 690

Query: 242 NEAME 246
            EA +
Sbjct: 691 MEAYQ 695


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 211/441 (47%), Gaps = 31/441 (7%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A   ++   + + +++ G   SV  FN +L  L    + + A+  F E       PNS T
Sbjct: 66  AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSST 124

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I   C      EA +++D M      PN+ T  I+V+ LCK+ +L+EA ++ +   
Sbjct: 125 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 184

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           + GC P+  TY  L+ GL   G+V+EAY +   + + G   +   YT+++  F   GR  
Sbjct: 185 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 244

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +  ++  E I RG  P++   NT  +   K G   KG  + + ++    LPD  SYS L+
Sbjct: 245 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 304

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-----------MKSWEEK--- 348
           +GL K G+ R   +IF  M + GF +D R  N+++ G C           ++  +EK   
Sbjct: 305 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 364

Query: 349 ----------------DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
                           D L++AY +FE+   K    +   Y  +I   GK  + DEA + 
Sbjct: 365 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 424

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L   ++ G  P   T+N+++ AL    +I++AL+    M E    P+  +Y +LI  L +
Sbjct: 425 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 484

Query: 453 LEKSYDACALYGAALKQGVIP 473
           ++K   A   +    KQG++P
Sbjct: 485 VQKYNKAFVFWQDMQKQGLVP 505



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 209/439 (47%), Gaps = 6/439 (1%)

Query: 36  SLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMA 94
           +LS  E +     P S      +D +     ++E   I D ++      ++   N ++  
Sbjct: 107 ALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDR 166

Query: 95  LVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPN 154
           L    + E A K F  AS  G  P+  T+  +I     K    EA ++ + M D G++ N
Sbjct: 167 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN 226

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
              +T L+ +    GR ++  ++  ++ R GCKP++   N  +  +   G VE+   +  
Sbjct: 227 PVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFE 286

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
           ++++ G  PDV +Y+ ++ G  K G++ E   + +   ++G   +   +N + +G+CK G
Sbjct: 287 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG 346

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              K   +L+ MK++   P   +Y  +++GL K  ++  A  +F+E    G E++  + +
Sbjct: 347 KVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYS 406

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           SL+ G     + +   +++AY + E+M KK    +  T+  ++  L K ++ +EAL+   
Sbjct: 407 SLIDG-----FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 461

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
              EM   P T T++ +I  LC   K +KA +    M +   +P+  +Y  +I+ L ++ 
Sbjct: 462 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 521

Query: 455 KSYDACALYGAALKQGVIP 473
              DA +L+      G IP
Sbjct: 522 NITDAYSLFERFKANGGIP 540



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 158/318 (49%), Gaps = 5/318 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF  + + G    ++  N  +  +    E E     F +  SYG  P+  ++SI+I    
Sbjct: 249 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 308

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 E   +   M   G+  +   +  +V+  CKSG++ +A E+L++M     +P + 
Sbjct: 309 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVA 368

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  ++ GL  + R++EAY +    K+ G++ +V  Y++++DGF KVGR +EA  +L E 
Sbjct: 369 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 428

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+TPNV T+N+L +   K     + +   + MK+  C P+  +YS L+NGL +  K 
Sbjct: 429 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKY 488

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A   +++M + G   +     +++ GL      +   + DAY +FE+      + D  
Sbjct: 489 NKAFVFWQDMQKQGLVPNVVTYTTMISGLA-----KVGNITDAYSLFERFKANGGIPDAA 543

Query: 372 TYGIVIRTLGKGKKTDEA 389
           ++  +I  +    +  EA
Sbjct: 544 SFNALIEGMSNANRAMEA 561



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 190/412 (46%), Gaps = 6/412 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  L     VDR+ KA  L+E   IF+S  + G N     +  L+  L    + + A + 
Sbjct: 155 PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 214

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F +    G   N   ++ +IR +       +  K+   +   G  P++T     ++ + K
Sbjct: 215 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFK 274

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G +++   + + +   G  P++++Y+ L+ GL   G+  E   +   +K  G   D   
Sbjct: 275 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 334

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y AV+DGFCK G+ ++A E+L E  E+ V P V T+  + +G  K     +   L +  K
Sbjct: 335 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 394

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            +    + + YS+L++G  K G+I  A  I +EM++ G   +    NSLL  L +K+ E 
Sbjct: 395 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDAL-VKAEE- 452

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
              + +A   F+ M +     +  TY I+I  L + +K ++A +      + G +P  +T
Sbjct: 453 ---INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 509

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           +  +I  L   G I  A  L      +  IP   S++ LI  +    ++ +A
Sbjct: 510 YTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 561



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 175/369 (47%), Gaps = 6/369 (1%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP  +     +D + K   + E   +F+ +   G N +   +  L+    +   +E   K
Sbjct: 189 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 248

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F E    G  P+    +  + C     +  + R + + +   G+ P+V +++IL++ L 
Sbjct: 249 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 308

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K+G+ +E   +   M + G   + + YN ++ G C  G+V +AYE+L  +K   ++P V 
Sbjct: 309 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVA 368

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY A++DG  K+ R +EA  L  EA  +G+  NVV +++L +G+ K G   +   +L+ M
Sbjct: 369 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 428

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            K+   P+  ++++LL+ L+K  +I  A+  F+ M       +    + L+ GLC     
Sbjct: 429 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKY 488

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
            K     A+  ++ M K+  V +  TY  +I  L K     +A          G IP   
Sbjct: 489 NK-----AFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 543

Query: 407 TFNNVIQAL 415
           +FN +I+ +
Sbjct: 544 SFNALIEGM 552



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 160/387 (41%), Gaps = 64/387 (16%)

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G  P+  ++T ++  LCK+GRL EA E+  QM      P    YN ++ G    GR E+
Sbjct: 12  QGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFED 71

Query: 209 AYEMLMNVKNDGLKPDVY----------------------------------TYTAVMDG 234
           AY++L  ++  G  P V                                   TY  ++D 
Sbjct: 72  AYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDM 131

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            C  GR  EA  +L+E     + PN++T N + +  CK     +   + +   +R C PD
Sbjct: 132 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 191

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE------K 348
            ++Y +L++GL K G++  A  +F++M+  G   +  +  SL+R   +   +E      K
Sbjct: 192 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK 251

Query: 349 DLL------------------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           +L+                        E    +FE +     + D  +Y I+I  L K  
Sbjct: 252 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 311

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           +  E     H   + G       +N V+   C  GK+ KA  +L  M E    P+  +Y 
Sbjct: 312 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 371

Query: 445 MLITKLDQLEKSYDACALYGAALKQGV 471
            ++  L ++++  +A  L+  A  +G+
Sbjct: 372 AIVDGLAKIDRLDEAYMLFEEAKSKGI 398



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 127/265 (47%), Gaps = 6/265 (2%)

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A++    +K  GLKPD  +YT+++   CK GR  EA EL  +       P    +NT+  
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           GY   G       LL+ +++R C+P  +S++++L  L K  K+  A+S+F E+++   E 
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +    N ++  LC+        +E+AY++ ++M       +  T  I++  L K +K +E
Sbjct: 121 NSSTYNIIIDMLCLGG-----RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEE 175

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A      A + G  P  +T+ ++I  L  +G++D+A  L   M +     +   Y  LI 
Sbjct: 176 AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 235

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
                 +  D   ++   +++G  P
Sbjct: 236 NFFIHGRKEDGHKIFKELIRRGCKP 260



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 84/185 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   +F+  K  G   +V  ++ L+     +   + A     E    GL PN +
Sbjct: 379 KIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 438

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++       +  EA      M +    PN  T++IL+N LC+  +  +A      M
Sbjct: 439 TWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDM 498

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  PN+ TY  ++ GL  VG + +AY +    K +G  PD  ++ A+++G     R+
Sbjct: 499 QKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRA 558

Query: 242 NEAME 246
            EA +
Sbjct: 559 MEAYQ 563


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 188/383 (49%), Gaps = 5/383 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN++L +LV      T +  F +    G+ P+  T SI+I C+C++     A  V   + 
Sbjct: 60  FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G+HPN  T   L+  LC  G +K+AL   DQ+   G + +  +Y  L+ GLC  G  +
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
               +L  ++   +KPDV  Y  +++  CK     +A ++ +E I +G++P+VVT+ TL 
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 239

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G+C  G   +   LL  MK +N  P+  +++ L++ L K GK++ A  +   M++   +
Sbjct: 240 HGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIK 299

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    NSL+ G     +   D ++ A  VF  M ++    D   Y  +I  L K K  D
Sbjct: 300 PDVFTYNSLIDG-----YFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA+           IP  +T+N++I  LC    +++A+ L   M E    P   SY +L+
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414

Query: 448 TKLDQLEKSYDACALYGAALKQG 470
             L +  +  DA  ++   L +G
Sbjct: 415 DGLCKSGRLEDAKEIFQRLLAKG 437



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 177/359 (49%), Gaps = 5/359 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +   D +   G       +  L+  L    E +   +   +   + + P+   ++ 
Sbjct: 143 IKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNT 202

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A  V   M   G  P+V T+T L++  C  G LKEA  +L++M    
Sbjct: 203 IINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKN 262

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ T+N L+  L   G+++EA  +L  +    +KPDV+TY +++DG+  V     A 
Sbjct: 263 INPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAK 322

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +     +RGVTP+V  +  + NG CK     + + L + MK +N +PD ++Y++L++GL
Sbjct: 323 YVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGL 382

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K   +  A+++ K M   G + D      LL GLC KS      LEDA ++F+++  K 
Sbjct: 383 CKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLC-KSGR----LEDAKEIFQRLLAKG 437

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              +   Y ++I  L K    DEAL       + G +P  +TF+ +I+AL  + + DKA
Sbjct: 438 YHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKA 496



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 132/261 (50%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LKE   + + +K    N +V  FN L+ AL    + + A    +      + P+ +T++ 
Sbjct: 248 LKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNS 307

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  Y   ++   A+ V   M   G  P+V  +T ++N LCK+  + EA+ + ++M    
Sbjct: 308 LIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKN 367

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+I TYN L+ GLC    +E A  +   +K  G++PDVY+YT ++DG CK GR  +A 
Sbjct: 368 MIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAK 427

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+    + +G   NV  +  L N  CK G   + + L   M+ + C+PD +++  ++  L
Sbjct: 428 EIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRAL 487

Query: 306 LKWGKIRPAVSIFKEMVRFGF 326
            +  +   A  I +EM+  G 
Sbjct: 488 FEKDENDKAEKILREMIARGL 508



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 141/321 (43%), Gaps = 5/321 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P    F  +++SL  +      + +  Q    G  P++ T + L+   C+   +  A+ +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
             N+   G  P+  T   ++ G C  G   +A+   ++ + +G   + V++ TL NG CK
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G       LL+ ++  +  PD + Y+T++N L K   +  A  ++ EM+  G   D   
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             +L+ G C+        L++A+ +  +M  K    +  T+ I+I  L K  K  EA I 
Sbjct: 235 YTTLIHGFCIMGH-----LKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKIL 289

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L   ++    P   T+N++I       ++  A  + + M +    P    Y  +I  L +
Sbjct: 290 LAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCK 349

Query: 453 LEKSYDACALYGAALKQGVIP 473
            +   +A +L+     + +IP
Sbjct: 350 TKMVDEAMSLFEEMKHKNMIP 370



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 1/246 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        +D + K   +KE   +   + K      V  +N L+    +++E + A  
Sbjct: 264 NPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKY 323

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F   +  G+ P+   ++ MI   C      EA  + + M      P++ T+  L++ LC
Sbjct: 324 VFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLC 383

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K+  L+ A+ +  +M   G +P++ +Y  LL GLC  GR+E+A E+   +   G   +V+
Sbjct: 384 KNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVH 443

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            YT +++  CK G  +EA++L ++  ++G  P+ VTF+ +     ++    K   +L+ M
Sbjct: 444 AYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM 503

Query: 287 KKRNCL 292
             R  L
Sbjct: 504 IARGLL 509


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 195/415 (46%), Gaps = 9/415 (2%)

Query: 15  TNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIF 73
           ++ R H+K   FN L     A  S    L +   P ++   R +  I K         + 
Sbjct: 34  SHNRFHSKSLNFNTL---DDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLS 90

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           + +   G    V   N L+ +   LN    A    ++    GL P++ TF+ +IR  C +
Sbjct: 91  NQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVE 150

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
               +A  + D M   G+ PNV T+  L+N LCK G    A+ +L  M +  C+P++  Y
Sbjct: 151 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 210

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
             ++  LC   +V EA+ +   +   G+ PD++TYT+++   C +        LLN+ I 
Sbjct: 211 TSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMIN 270

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
             + P+VV F+T+ +  CKEG   +   ++ +M  R   P+ ++Y+ L++G     ++  
Sbjct: 271 SKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDE 330

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           AV +F  MV  G+  +    N+L+ G C     +K     A  +FE+M +K  + +  TY
Sbjct: 331 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK-----ATYLFEEMCQKELIPNTVTY 385

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             ++  L    +  +A+   H  +  G IP   T+  ++  LC +  +D+A+ LL
Sbjct: 386 NTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALL 440



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 193/405 (47%), Gaps = 5/405 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + +FD +  +G   +V  +  L+  L  +     A++           P+   ++ 
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G  P++ T+T L++SLC     K    +L+QM    
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 272

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++  ++ ++  LC  G++ EA++++  +   G++P+V TY A+MDG C     +EA+
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 332

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +  +  G  PNV+++NTL NGYCK     K   L + M ++  +P+ ++Y+TL++GL
Sbjct: 333 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGL 392

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+++ A+++F EMV  G   D      LL  LC KS      L++A  + + +    
Sbjct: 393 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSH-----LDEAMALLKTIEGSN 447

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D   Y IVI  + +  + + A     +    G  P   T+  +I  LC  G +D+A 
Sbjct: 448 MDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEAN 507

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
            L   M  +   P   +Y+ +   L Q +++  A  L    L +G
Sbjct: 508 KLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 552



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 174/364 (47%), Gaps = 6/364 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  ++F  +   G +  +  +  L+ +L  L E +      ++  +  + P+  
Sbjct: 219 KDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVV 278

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            FS ++   C +    EA  V+D M   G  PNV T+  L++  C    + EA++V D M
Sbjct: 279 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 338

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN+ +YN L+ G C + R+++A  +   +    L P+  TY  +M G C VGR 
Sbjct: 339 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRL 398

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L +E +  G  P++ T+  L +  CK+    + + LLK ++  N  PD   Y+ +
Sbjct: 399 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 458

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G+ + G++  A  IF  +   G   + R    ++ GLC      + LL++A ++F +M
Sbjct: 459 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC-----RRGLLDEANKLFMEM 513

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  D  TY  + + L + K+   A+  L   +  G      T   +++ LC + K+
Sbjct: 514 DGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC-DDKL 572

Query: 422 DKAL 425
           D+++
Sbjct: 573 DQSV 576



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 162/351 (46%), Gaps = 30/351 (8%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P+   F  L+ S+ K+ +      + +QM   G  P++ T N L+   C++ R   A+ +
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   GL+PD  T+T ++ G C  G+  +A+ L ++ I  G  PNVVT+ TL NG CK
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     + LL+ M++ NC PD + Y+++++ L K  ++  A ++F +MV  G   D   
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 333 MNSLLRGLC-MKSWEEKDLL-----------------------------EDAYQVFEKMT 362
             SL+  LC +  W+    L                              +A+ V + M 
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            +    +  TY  ++       + DEA+      +  G+ P  I++N +I   C   ++D
Sbjct: 305 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 364

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           KA  L   M +   IP+  +Y+ L+  L  + +  DA AL+   +  G IP
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIP 415



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 86/188 (45%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ I +F  +   G    ++ +  LL  L   +  + A+          + P+   ++I
Sbjct: 398 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 457

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C   +   AR +   +   G  PNV T+TI++N LC+ G L EA ++  +M   G
Sbjct: 458 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 517

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P+  TYN + +GL        A ++L  +   G   DV T T +++  C         
Sbjct: 518 CSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVK 577

Query: 246 ELLNEAIE 253
           ++L+E ++
Sbjct: 578 QILSEFVQ 585



 Score = 41.6 bits (96), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 26/119 (21%), Positives = 53/119 (44%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+   DIF ++   G   +V  +  ++  L      + A K F E    G +P+  
Sbjct: 464 RAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGC 523

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T++ + +      +   A +++  M   G+  +V+T T+LV  LC     +   ++L +
Sbjct: 524 TYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 582


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 176/352 (50%), Gaps = 5/352 (1%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFSI+I          +A  +      NG   ++ T+T +V+ L K+ +++EA+ +++++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P I TYN LL GLC +GR+EEA ++L  + ++G  PDV TYT+++DG  K  RS
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +L  E   RG+  + V +  L  G  + G   +   + K M  + C+PD ++ ST+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K G+I  AV IFK M   G   +E + ++L+ GLC     +   ++ A ++  +M
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC-----KARKMDCALEMLAQM 235

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K     D  TY I+I  L K      A       +E G  P   T+N +I   C  G  
Sbjct: 236 KKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNT 295

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           D A  +   M      P+  +Y  LI+ L +  +   A   Y    ++G  P
Sbjct: 296 DAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPP 347



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 178/363 (49%), Gaps = 7/363 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E ID+   I  +G    V  +  L+  L        A K F E +S GLA ++ 
Sbjct: 81  KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTV 140

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +IR         +A  V   M   G  P+V T + +++ LCK+GR+  A+ +   M
Sbjct: 141 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 200

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN   Y+ L+ GLC   +++ A EML  +K     PD  TY  ++DG CK G  
Sbjct: 201 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 260

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A    +E +E G  P+V T+N L +G+CK G      G+   M    C P+ ++Y TL
Sbjct: 261 AAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTL 320

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K  ++  A   ++ M   G   D  + +SL+ GLC KS +    LE    +F++M
Sbjct: 321 ISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC-KSGK----LEGGCMLFDEM 375

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            ++  V +  T   +I  L K  + DEA + L +AI    +P    +N++I AL   GK+
Sbjct: 376 -ERSGVANSQTRTRLIFHLCKANRVDEA-VSLFNAIRKEGMPHPYAYNSIISALIKSGKV 433

Query: 422 DKA 424
           ++ 
Sbjct: 434 NEG 436



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 195/411 (47%), Gaps = 6/411 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA  L +   +      +G    +  +  ++  L    + + AV    + ++ G  P  
Sbjct: 10  VKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTI 69

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ ++   C      EA  ++  + DNG  P+V T+T L++ L K  R  EA ++  +
Sbjct: 70  ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKE 129

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G   +   Y  L++GL   G++ +A  +   + + G  PDV T + ++DG CK GR
Sbjct: 130 MASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGR 189

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A+ +      RG+ PN V ++ L +G CK       + +L  MKK  C PD I+Y+ 
Sbjct: 190 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 249

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL K G +  A + F EM+  G + D    N L+ G C     +      A  VF+ 
Sbjct: 250 LIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDA-----ACGVFDD 304

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M+      +  TYG +I  L K ++  +A ++  H  E G  P +  +++++  LC  GK
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           ++    +LF   E + + +  +   LI  L +  +  +A +L+ A  K+G+
Sbjct: 365 LEGG-CMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 414



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 128/260 (49%), Gaps = 2/260 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +   + IF S++  G   +   ++ L+  L    + + A++  ++       P++ 
Sbjct: 186 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 245

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I   C   D   AR   D M + G  P+V T+ IL++  CK+G    A  V D M
Sbjct: 246 TYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 305

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C PN+ TY  L+ GLC   ++ +A     ++K  G  PD + Y++++DG CK G+ 
Sbjct: 306 SSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKL 365

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
                L +E +ER    N  T   L    CK     + V L   ++K   +P   +Y+++
Sbjct: 366 EGGCMLFDE-MERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSI 423

Query: 302 LNGLLKWGKIRPAVSIFKEM 321
           ++ L+K GK+    ++++EM
Sbjct: 424 ISALIKSGKVNEGQAVYQEM 443


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 199/395 (50%), Gaps = 21/395 (5%)

Query: 62  KASPLKERIDIFDSIKK-----DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           KA  L++ + +   +       D T  +V     ++ +L + +  + A +   E    G+
Sbjct: 161 KAGRLRDAVQVLQEMVSARHVPDNTTLTV-----VVQSLCLGDRVDDARELVEEMLHRGM 215

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVI-DCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           A N+ T+S ++   C      EA  ++   +   G+ P++ T++ +++ LCK+GRL++A+
Sbjct: 216 AANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 275

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           ++ ++M    C P   TYN L+ G C  G ++EA  +L  + +D   PDV TYT +M  F
Sbjct: 276 DIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAF 332

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK+GR ++A EL  + +   ++P+VVTF +L +G C EG     + LL+ + +R C P  
Sbjct: 333 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 392

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
            +Y+ +++G  K  ++R A  +  +    GF  +    N L+ G C     ++     A 
Sbjct: 393 YTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ-----AL 447

Query: 356 QVFEKMTKKVSV--TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           Q  +++  +     T    Y I++  L +  +TD+A+      I+ G++P   TF  V+ 
Sbjct: 448 QYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVF 507

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           ALC   +  +A  LL  M ++   P   + D +++
Sbjct: 508 ALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVS 542



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 204/450 (45%), Gaps = 47/450 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E + +   +K  G N      N ++  L        A+  + + +     P+  
Sbjct: 92  KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFL 150

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++          +A +V+  M    + P+ TT T++V SLC   R+ +A E++++M
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGR 240
              G   N  TY+ L+ GLC   R++EA  +L+  V   G  PD+ TY+ V+DG CK GR
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGR 270

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A+++  E       P  +T+N+L  GYC+ G   + + LL  M   NC PD I+Y+T
Sbjct: 271 LRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTT 327

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++   K G++  A  +F++MV      D     SL+ GLC +       +EDA ++ E+
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR-----MEDALELLEE 382

Query: 361 MTKKVS-----------------------------------VTDPGTYGIVIRTLGKGKK 385
           +T++                                     V +  TY I++    +  +
Sbjct: 383 ITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGR 442

Query: 386 TDEALIHLHHA-IEMGHIPRTITFNNVI-QALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           TD+AL +L     E G  P ++    +I  ALC +G+ D A+     M +   +P+  ++
Sbjct: 443 TDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 502

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
             ++  L +  +   A  L    +K G  P
Sbjct: 503 ATVVFALCKAHQPQQAHELLEEMIKYGHTP 532



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 204/438 (46%), Gaps = 44/438 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + + G     + +N L+  L      + A+    +  S G+ P +   +++I   C
Sbjct: 68  LFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLC 126

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A  V   M D  + P+  T+T LV+ L K+GRL++A++VL +M      P+  
Sbjct: 127 RAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNT 185

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME-LLNE 250
           T   +++ LC   RV++A E++  + + G+  +  TY+A++DG CK  R +EA+  LL E
Sbjct: 186 TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGE 245

Query: 251 AIERGVTPNVV--------------------------------TFNTLFNGYCKEGTPMK 278
              RG TP++V                                T+N+L  GYC+ G   +
Sbjct: 246 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDE 305

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            + LL  M   NC PD I+Y+TL++   K G++  A  +F++MV      D     SL+ 
Sbjct: 306 AIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVD 365

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           GLC +       +EDA ++ E++T++       TY  V+    K  +  +A   +     
Sbjct: 366 GLCGEGR-----MEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRS 420

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL---EK 455
            G +P T+T+N ++   C  G+ D+AL  L  +      P  TS  M    LD L    +
Sbjct: 421 RGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGG-PCPTSVAMYAIILDALCRDGR 479

Query: 456 SYDACALYGAALKQGVIP 473
           + DA   Y   +++G +P
Sbjct: 480 TDDAVQFYEEMIQRGYVP 497



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 161/331 (48%), Gaps = 18/331 (5%)

Query: 68  ERID-----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           ER+D     +   + + G    +  ++ ++  L        AV  F E S    AP + T
Sbjct: 233 ERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSC---APTAIT 289

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  YC   D  EA +++  M D+   P+V T+T L+++ CK GRL +A E+  QM 
Sbjct: 290 YNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMV 349

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
                P++ T+  L+ GLC  GR+E+A E+L  +   G  P +YTY  V+DG+CK  +  
Sbjct: 350 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVR 409

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN--CLPDKISYST 300
           +A EL+ +   RG  PN VT+N L  G C+ G   + +  L  +      C      Y+ 
Sbjct: 410 KAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI 469

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +L+ L + G+   AV  ++EM++ G+        +++  LC     ++     A+++ E+
Sbjct: 470 ILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQ-----AHELLEE 524

Query: 361 MTKKVSVTDPGTYGIVIRTL---GKGKKTDE 388
           M K      PGT   V+      G  +K DE
Sbjct: 525 MIKYGHTPGPGTCDAVVSAYCRAGMIQKADE 555



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 164/368 (44%), Gaps = 11/368 (2%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
              E    GL+P+    + ++   C+  D   A  + D M + G   N TT+  L++ LC
Sbjct: 33  LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPLC 91

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K+  L EA+ +L  M   G  P    +N ++ GLC  GR+  A  +   + ND   PD  
Sbjct: 92  KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFL 150

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYT ++ G  K GR  +A+++L E +     P+  T   +    C          L++ M
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF-KEMVRFGFEVDERMMNSLLRGLCMKSW 345
             R    + I+YS L++GL K  ++  AV++   E+ R GF  D    ++++ GLC    
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGR 270

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                L DA  +FE+M+   +     TY  +I    +    DEA+  L   ++    P  
Sbjct: 271 -----LRDAVDIFEEMSCAPTAI---TYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDV 322

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           IT+  ++ A C  G++D A  L   M  +   P   ++  L+  L    +  DA  L   
Sbjct: 323 ITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEE 382

Query: 466 ALKQGVIP 473
             ++G  P
Sbjct: 383 ITRRGCPP 390



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 40/297 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L++ +DIF+ +    T  +   +N L+       + + A++   +      AP+  
Sbjct: 267 KAGRLRDAVDIFEEMSCAPTAIT---YNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVI 323

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  +C      +A ++   M  N   P+V TFT LV+ LC  GR+++ALE+L+++
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383

Query: 182 GRIGCKPNIQTYNC-----------------------------------LLKGLCYVGRV 206
            R GC P I TYNC                                   L+ G C  GR 
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443

Query: 207 EEAYEMLMNVKNDG--LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           ++A + L  + ++G      V  Y  ++D  C+ GR+++A++   E I+RG  P   TF 
Sbjct: 444 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 503

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+    CK   P +   LL+ M K    P   +   +++   + G I+ A  +  E+
Sbjct: 504 TVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 146/304 (48%), Gaps = 12/304 (3%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKE-ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
           M D GY  + +TF +++  L  S +L+     +LD++   G  P+    N +L  LC   
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A  +   +   G   +  TY  ++   CK    +EAM LL +   RG+ P  +  N
Sbjct: 61  DTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            +  G C+ G     +G+ + M   +  PD ++Y+ L++GL K G++R AV + +EMV  
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
               D   +  +++ LC+      D ++DA ++ E+M  +    +  TY  ++  L K +
Sbjct: 179 RHVPDNTTLTVVVQSLCL-----GDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCE 233

Query: 385 KTDEAL-IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           + DEA+ + L      G  P  +T++ VI  LC  G++  A   + +  E +  P+  +Y
Sbjct: 234 RLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA---VDIFEEMSCAPTAITY 290

Query: 444 DMLI 447
           + LI
Sbjct: 291 NSLI 294



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/189 (19%), Positives = 80/189 (42%), Gaps = 37/189 (19%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ +++ + I + G   ++  +N ++      N+   A +  ++  S G  PN+ T++I
Sbjct: 373 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNI 432

Query: 126 MIRCYCNKNDFFEARKVID-----------------------C--------------MFD 148
           ++   C      +A + +D                       C              M  
Sbjct: 433 LVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQ 492

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            GY P   TF  +V +LCK+ + ++A E+L++M + G  P   T + ++   C  G +++
Sbjct: 493 RGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQK 552

Query: 209 AYEMLMNVK 217
           A E+   ++
Sbjct: 553 ADELASELR 561


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 209/455 (45%), Gaps = 53/455 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + +F  +K  G   + S  N LL+ L  + +  +A+K F E  +    P S 
Sbjct: 44  KGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSA 103

Query: 122 TFSIMIR-------------------------------------CYCNK--NDFFEARKV 142
           + +I++R                                     C+ NK  N   +A + 
Sbjct: 104 SHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEF 163

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
              M  +G  P++ ++ IL+++L  SGR+ EA  +   M    C P+I TYN L+ G C 
Sbjct: 164 FKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCK 220

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           +G+  EA  ++  +   G +P+V+TY+ +++ +CK+ +  EA E+  + IE    PN VT
Sbjct: 221 IGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVT 280

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL-KWGKIRPAVSIFKEM 321
           FNTL  G+CK G     + L   M+K  C    ++Y+TL++ L  K G +  AV +F ++
Sbjct: 281 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 340

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G        NSL++G C     +   L +A Q F++M  K +  +  TY I+I  L 
Sbjct: 341 EGAGLTPTIVTYNSLIQGFC-----DARRLSEAMQYFDEMEGKCA-PNVITYSILIDGLC 394

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K ++  EA   L      G+ P  +T+  +I   C  G++  ALL    M      P+  
Sbjct: 395 KVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTV 454

Query: 442 SYDMLITKLDQLEKSYDA----CALYGAALKQGVI 472
            ++ LI  L + E++ D     C ++    K  VI
Sbjct: 455 IFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVI 489



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 185/397 (46%), Gaps = 27/397 (6%)

Query: 46  KENPRSLQAQRFVDRIKAS---PLKERIDIFDSIKKDGTNWS--------------VSDF 88
           K   R  QA  F   +KAS   P  E   I  S   D    +              +  +
Sbjct: 152 KSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTY 211

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N L+     + +   A     E    G  PN +T+SI+I CYC  +   EA +V   M +
Sbjct: 212 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV-GRVE 207
           +   PN  TF  L+   CK+G L++A+++  +M +IGCK  I TYN L+  LC   G V 
Sbjct: 272 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVY 331

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A ++   ++  GL P + TY +++ GFC   R +EAM+  +E +E    PNV+T++ L 
Sbjct: 332 TAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDE-MEGKCAPNVITYSILI 390

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G CK     +    L+ MK     P  ++Y  L+NG  K G+++ A+  F++M   G  
Sbjct: 391 DGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCA 450

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +  + N+L+ GLC     + +   D  ++   M  +    D  TY  +I  L    + +
Sbjct: 451 PNTVIFNTLIDGLC-----KAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVE 505

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +A         M   P   TFN +I+ LC + K+++A
Sbjct: 506 DAQRLFDG---MACAPNVTTFNFLIRGLCAQKKVEEA 539



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 33/212 (15%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D+F+ ++  G   ++  +N L+           A+++F E      APN  T+SI+I  
Sbjct: 334 VDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDG 392

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C      EA K ++ M  +GY P V T+  L+N  CK G LK AL   ++M   GC PN
Sbjct: 393 LCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPN 452

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM----------------- 232
              +N L+ GLC   R  +   +L ++  +G KPDV TY  ++                 
Sbjct: 453 TVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFD 512

Query: 233 ---------------DGFCKVGRSNEAMELLN 249
                           G C   +  EA  +L+
Sbjct: 513 GMACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 3/118 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   LK  +  F+ +K  G   +   FN L+  L         ++      + G  P+  
Sbjct: 430 KCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVI 489

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           T++ +I   C+ N   +A+++ D M      PNVTTF  L+  LC   +++EA  +LD
Sbjct: 490 TYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 5/128 (3%)

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           N+LL GL   S  + D    A ++F+++   +   +  TY ++IR   KG +  +A+   
Sbjct: 1   NALLSGLV--SARKHD---QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVF 55

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
                 G +P   T N ++  LC  G++  AL L   M     +P+  S+++L+      
Sbjct: 56  SDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMA 115

Query: 454 EKSYDACA 461
            +  DA A
Sbjct: 116 GRVRDALA 123


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 186/356 (52%), Gaps = 7/356 (1%)

Query: 80  GTNWS--VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           G N+   V  ++ ++ AL     ++ A   F E    G+ P   +++ +I  +C    + 
Sbjct: 235 GINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWE 294

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA+++ + M + G  PNV TF +L++ LCK G++ EA ++L+ M + G  PN+ TYN L+
Sbjct: 295 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 354

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
           +G C VG +  A E+ +++ + G +PDV  YT +++G+CK  +  EAM+L N  ++ G  
Sbjct: 355 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 414

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+V T+  L  G  + G       L  +MK      D   Y   LNGL K G +  A+ +
Sbjct: 415 PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMEL 474

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F ++  +  ++D    N L+ GLC     +   LE A+++FEK+ ++    D  TY I+I
Sbjct: 475 FNKLKSYNIKLDIECFNCLIDGLC-----KAGKLETAWELFEKLPQEELQPDVVTYNIMI 529

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
               +G +  +A I      + G  P  IT+  +I+      K++K + LL +M +
Sbjct: 530 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 585



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 200/468 (42%), Gaps = 83/468 (17%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +S F  LL  L  +         +++    G++P+  T +I++ C CN N   E   V+ 
Sbjct: 96  LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMA 155

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY P++ T+T L+  LC   R+ +A  +  +M ++GC PN  TY  L+KGLC  G
Sbjct: 156 GILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTG 215

Query: 205 -----------------------------------------RVEEAYEMLMNVKNDGLKP 223
                                                    R +EA ++   +K  G+ P
Sbjct: 216 NISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTP 275

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            V +YT+++ GFC  G+  EA  L NE + +GV PNVVTFN L +  CKEG  ++   LL
Sbjct: 276 TVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLL 335

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           ++M +R  +P+ ++Y++L+ G    G +  A  +F  M   G E D      L+ G C  
Sbjct: 336 EVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKT 395

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           S      +E+A +++  M +     D  TYG ++  L +G K  +A   L   +++  IP
Sbjct: 396 SK-----VEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAK-KLFGVMKVYGIP 449

Query: 404 RTI------------------------------------TFNNVIQALCGEGKIDKALLL 427
             +                                     FN +I  LC  GK++ A  L
Sbjct: 450 GDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWEL 509

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
              + +    P   +Y+++I +  +  +   A  L+    K G  P +
Sbjct: 510 FEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDK 557



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 157/331 (47%), Gaps = 5/331 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  D+F+ +K  G   +V  +  L+       + E A + F+E  + G+ PN  TF+++I
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLI 319

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    EA+ +++ M   G  PN+ T+  L+   C  G L  A E+   M   GC+
Sbjct: 320 DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCE 379

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++  Y  L+ G C   +VEEA ++   +   G +PDV TY A++ G  + G+  +A +L
Sbjct: 380 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 439

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
                  G+  ++  +    NG CK G   + + L   +K  N   D   ++ L++GL K
Sbjct: 440 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 499

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK+  A  +F+++ +   + D    N ++   C      K     A  +F+KM K    
Sbjct: 500 AGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVK-----ANILFQKMEKNGCT 554

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
            D  TY  +IR   + KK ++ +  LH  ++
Sbjct: 555 PDKITYATLIRGFFESKKLEKVVELLHMMVQ 585



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 149/331 (45%), Gaps = 13/331 (3%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +++FT L++ L K     +   + +QM   G  P+  T N LL  LC V RV E   +
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           +  +   G  PD+ TYT ++ G C   R ++A  L     + G TPN +T+ TL  G C+
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 273 EGTPMKGVGLLKLMKKRNCL------PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            G     + L + M   + L      P  ISYS +++ L K  +   A  +F+EM   G 
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 327 EVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   SL+ G C    WEE      A ++F +M  +    +  T+ ++I  L K  K
Sbjct: 274 TPTVISYTSLIHGFCCGGKWEE------AKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGK 327

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             EA   L   I+ G +P  +T+N++I+  C  G ++ A  L   M      P    Y +
Sbjct: 328 VIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTV 387

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           LI    +  K  +A  LY   L+ G  P  K
Sbjct: 388 LINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 418



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 15/291 (5%)

Query: 166 CKSGRLK--EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           CK+G +   +A +    M      P + ++  LL GL  +    + + +   ++  G+ P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D  T   +++  C V R  E + ++   + RG  P++VT+ TL  G C E    K   L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR----FGFEVDERMMNS--LL 337
             M+K  C P+ I+Y TL+ GL + G I  A+ + +EM+     +G      +++   ++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 338 RGLCMKSWEEKDLLED-AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
             LC      KD  ED A  +FE+M  +       +Y  +I     G K +EA    +  
Sbjct: 250 DALC------KDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +  G  P  +TFN +I  LC EGK+ +A  LL +M +   +P+  +Y+ LI
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 354


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 208/413 (50%), Gaps = 21/413 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N  L A V  +    AV  ++  +  G   + P+  T+ I+I 
Sbjct: 37  VFDELLRRGRGASIYGLNRAL-ADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
           C C           +  +   G+  +   FT L+  LC   R  +A++ VL +M  +GC 
Sbjct: 96  CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---GLKPDVYTYTAVMDGFCKVGRSNEA 244
           PN+ +YN LLKGLC   R +EA E+L  + +D   G  PDV +YT V++GF K G S++A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
               +E ++RG+ P+VVT+N++    CK     K + +L  M K   +PD ++Y+++L+G
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
               G+ + A+   K+M   G E D    + L+  LC     +     +A ++F+ MTK+
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLC-----KNGRCMEARKIFDSMTKR 330

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGK 420
               +  TYG    TL +G  T  AL+ +H  +++    G  P    F+ +I A   +GK
Sbjct: 331 GLKPEITTYG----TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +D+A+L+   M +    P+  +Y  +I  L +  +  DA   +   + +G+ P
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 202/410 (49%), Gaps = 11/410 (2%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     ++ DG    V  ++ L+  L        A K F   +  GL P   T+  +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG HP+   F+IL+ +  K G++ +A+ V  +M + G 
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN  TY  ++  LC  GRVE+A      + ++GL P    Y +++ G C   +   A E
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E ++RG+  N + FN++ + +CKEG  ++   L +LM +    P+ I+Y+TL+NG  
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A+ +   MV  G + +    ++L+ G C  S      +EDA  +F++M     
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR-----MEDALVLFKEMESSGV 577

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY I+++ L + ++T  A        E G      T+N ++  LC     D AL 
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 427 L---LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   L LM    K+ +RT ++++I  L ++ ++ +A  L+ A    G++P
Sbjct: 638 MFQNLCLM--DLKLEART-FNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 684



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 187/391 (47%), Gaps = 14/391 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IFDS+ K G    ++ +  LL                      G+ P+ + FSI+I  Y 
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    +A  V   M   G +PN  T+  ++  LCKSGR+++A+   +QM   G  P   
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            YN L+ GLC   + E A E+++ + + G+  +   + +++D  CK GR  E+ +L    
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  GV PNV+T+NTL NGYC  G   + + LL  M      P+ ++YSTL+NG  K  ++
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ +FKEM   G   D    N +L+GL             A +++ ++T+  +  +  
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA-----AKELYVRITESGTQIELS 617

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY I++  L K K TD+AL    +   M       TFN +I AL   G+ D+A  L    
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677

Query: 432 YEHAKIPSRTSYDM---------LITKLDQL 453
             +  +P+  +Y +         L+ +LDQL
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 213/467 (45%), Gaps = 58/467 (12%)

Query: 58  VDRIKASPL-------KERIDIFDSIKKDGTNW----SVSDFNDLLMALVMLNEQETAVK 106
           VD I  +PL       K   D  D + +  T      +V  +N LL  L   N  + A++
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALE 179

Query: 107 FF---SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
                ++    G  P+  +++ +I  +  + D  +A      M D G  P+V T+  ++ 
Sbjct: 180 LLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIA 239

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK+  + +A+EVL+ M + G  P+  TYN +L G C  G+ +EA   L  +++DG++P
Sbjct: 240 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEP 299

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV TY+ +MD  CK GR  EA ++ +   +RG+ P + T+ TL  GY  +G  ++  GLL
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF----------------- 326
            LM +    PD   +S L+    K GK+  A+ +F +M + G                  
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419

Query: 327 -EVDERMM-----------------NSLLRGLCM-KSWEEKDLLEDAYQVFEKMTKKVSV 367
             V++ M+                 NSL+ GLC    WE  + L     + E + + + +
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL-----ILEMLDRGICL 474

Query: 368 TDPGTYGIVIRTLGKGKKTD-EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                  I+     +G+  + E L  L   + +G  P  IT+N +I   C  GK+D+A+ 
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFEL--MVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LL  M      P+  +Y  LI    ++ +  DA  L+      GV P
Sbjct: 533 LLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 176/372 (47%), Gaps = 41/372 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + +F  +++ G N +   +  ++  L      E A+ +F +    GL+P + 
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C  N +  A ++I  M D G   N   F  +++S CK GR+ E+ ++ + M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            RIG KPN+ TYN L+ G C  G+++EA ++L  + + GLKP+  TY+ +++G+CK+ R 
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L  E    GV+P+++T+N                                    +
Sbjct: 563 EDALVLFKEMESSGVSPDIITYN-----------------------------------II 587

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L GL +  +   A  ++  +   G +++    N +L GLC     +  L +DA Q+F+ +
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC-----KNKLTDDALQMFQNL 642

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  +  T+ I+I  L K  + DEA          G +P   T+  + + + G+G +
Sbjct: 643 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 702

Query: 422 DKALLLLFLMYE 433
           ++ L  LFL  E
Sbjct: 703 EE-LDQLFLSME 713



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 147/344 (42%), Gaps = 48/344 (13%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK---PNIQTYN 194
           +AR V D +   G   ++      +  + +      A+   ++M R G     P++ TY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEAIE 253
            L+   C  GR++  +  L NV   G + D   +T ++ G C   R+++AM++ L    E
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM---KKRNCLPDKISYSTLLNGLLKWGK 310
            G  PNV ++N L  G C E    + + LL +M   +     PD +SY+T++NG  K G 
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
                                                    + AY  + +M  +  + D 
Sbjct: 212 S----------------------------------------DKAYSTYHEMLDRGILPDV 231

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I  L K +  D+A+  L+  ++ G +P  +T+N+++   C  G+  +A+  L  
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           M      P   +Y +L+  L +  +  +A  ++ +  K+G+ P+
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 4/141 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +++  I + GT   +S +N +L  L      + A++ F       L   + TF+IMI   
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661

Query: 131 --CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
               +ND  EA+ +      NG  PN  T+ ++  ++   G L+E  ++   M   GC  
Sbjct: 662 LKVGRND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTV 719

Query: 189 NIQTYNCLLKGLCYVGRVEEA 209
           +    N +++ L   G +  A
Sbjct: 720 DSGMLNFIVRELLQRGEITRA 740


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 205/402 (50%), Gaps = 10/402 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +    ++ + +F  I + G   +V  +N LL AL+  N+ +     ++     GL PN +
Sbjct: 121 RVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVF 180

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+++  C  +    A K+   M + G  P+  T+T +V+SLCK+G++ +A E+    
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL---A 237

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           GR   KP++  YN L+ G+C  GR+E A ++L  + ++G+ P+V +Y+ +++  C  G  
Sbjct: 238 GRF--KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNV 295

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A  L  +   RG   N+ TF  L  G    G   + + L KLM +  C P+ ++Y+TL
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL 355

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL   G +  A+ +  +M R G   +    + L+ G      +  DL+  A + + +M
Sbjct: 356 IHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFA----KSGDLV-GASETWNRM 410

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  +  TY  ++  L K    D+A   +      G  P T+TFN  I+ LCG G++
Sbjct: 411 ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRV 470

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           + A+ LL  M  H  +P+ T+Y+ L+  L ++ K  +A  L+
Sbjct: 471 EWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLF 512



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 196/417 (47%), Gaps = 9/417 (2%)

Query: 34  AASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLL 92
           A  +  A  L  +  P        +D + K   ++  I +   +  +G + +V  ++ ++
Sbjct: 227 AGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCII 286

Query: 93  MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
            +L +    E A   F++    G   N  TF+ +I+    +   +EA  +   M  +G  
Sbjct: 287 NSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE 346

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           PNV  +  L++ LC +G L+EAL+V DQM R GC PN+ TY+ L+ G    G +  A E 
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASET 406

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              + + G +P+V TYT ++D  CK    ++A  L+ +    G TPN +TFNT   G C 
Sbjct: 407 WNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCG 466

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     + LL+ M+   CLP+  +Y+ LL+ L +  K   A  +F+E+     + +   
Sbjct: 467 NGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVT 526

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA--L 390
            N++L G     +    ++ +A Q+F K   + +  D  TY  +I    K  K   A  L
Sbjct: 527 YNTVLYG-----FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL 581

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +    +++  H P  IT+ ++I   C    I++A+  L         P+  +++ L+
Sbjct: 582 VERVSSMKEWH-PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 205/469 (43%), Gaps = 73/469 (15%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++ ++KKDG   +V  +N LL AL   +  + A K F E S+ G  P++ T++ M+   C
Sbjct: 166 LYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLC 225

Query: 132 NKNDFFEAR------------------------------KVIDCMFDNGYHPNVTTFTIL 161
                 +AR                              K++  M DNG  PNV +++ +
Sbjct: 226 KAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCI 285

Query: 162 VNSLCKSG-----------------------------------RLKEALEVLDQMGRIGC 186
           +NSLC SG                                   +L EAL++   M + GC
Sbjct: 286 INSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC 345

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +PN+  YN L+ GLC  G +EEA ++   ++  G  P+V TY+ ++DGF K G    A E
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASE 405

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
             N  I  G  PNVVT+  + +  CK     +   L++ M    C P+ ++++T + GL 
Sbjct: 406 TWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLC 465

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKV 365
             G++  A+ + + M   G   +    N LL  L  M  +EE      A+ +F+++  + 
Sbjct: 466 GNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEE------AFGLFQEIEARN 519

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY  V+    +     EAL     A+  G  P +IT+N +I A C +GK+  A 
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAA 579

Query: 426 LLLFLMYEHAKI-PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L+  +    +  P   +Y  LI          +A A    A+ QG+ P
Sbjct: 580 QLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 6/314 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E +D++  + +DG   +V  +N L+  L      E A++   +    G  PN  T+SI
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +    D   A +  + M  +G  PNV T+T +V+ LCK+    +A  ++++M   G
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN  T+N  +KGLC  GRVE A ++L  ++  G  P++ TY  ++D   ++ +  EA 
Sbjct: 450 CTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  E   R + PN+VT+NT+  G+ + G   + + L      R   PD I+Y+T+++  
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569

Query: 306 LKWGKIRPAVSIFKEMVRFG-FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
            K GK++ A  + + +     +  D     SL+ G C  +W     +E+A    +K   +
Sbjct: 570 CKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGAC--NWMN---IEEAMAFLDKAINQ 624

Query: 365 VSVTDPGTYGIVIR 378
               +  T+  ++R
Sbjct: 625 GICPNFATWNALVR 638



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 93/187 (49%), Gaps = 1/187 (0%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + + ++  G   +++ +N+LL AL  +N+ E A   F E  +  L PN  T++ ++  
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG-CKP 188
           +       EA ++       G  P+  T+  ++++ CK G++K A ++++++  +    P
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHP 593

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           +I TY  L+ G C    +EEA   L    N G+ P+  T+ A++  F         + +L
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHIL 653

Query: 249 NEAIERG 255
           ++ + +G
Sbjct: 654 DDILRKG 660


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 194/388 (50%), Gaps = 10/388 (2%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           + +DG    V  +  ++  L    + + A +   E    G+ P+ +TFS +I  +CN   
Sbjct: 104 VTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARK 163

Query: 136 FFEARKVI-DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
             EA K+  + +  + + P+V T+T L++  CKSG L++A+++L  M    C PN+ TY+
Sbjct: 164 VDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYS 223

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            LL GLC  G +++A ++   + + G  P+V TYT ++ G C   + + A  L++E    
Sbjct: 224 SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT 283

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
              P+ V++N L +GYC+ G   +   L K M  ++CLPD+I+Y+ L+ G     ++  A
Sbjct: 284 CCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEA 343

Query: 315 VSIFKEM-VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
             + + M    G + D    + ++ G     +       +A +  ++M  +    +  TY
Sbjct: 344 RFLLENMKTAAGIDPDVVTYSIVVAG-----YSRAKRFVEAAEFIQEMIARNVAPNAVTY 398

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             +I  L K  + D A+  L + +     P   TFN+VI ALC  G +D+A  LL  M  
Sbjct: 399 SSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA 458

Query: 434 HAKIPSRTSYDMLI---TKLDQLEKSYD 458
           H   P   +Y  L+   ++  ++E +Y+
Sbjct: 459 HGLEPGMVTYTTLLEGFSRTGRMEIAYE 486



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 192/397 (48%), Gaps = 45/397 (11%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD-NGYHPNVTTFTILVNSLCKSGRLKEA 174
           +AP+  T+S +I  +C + +   A +++  M   +G  P+V T+T +V+ LC+ G++  A
Sbjct: 73  VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRA 132

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-KNDGLKPDVYTYTAVMD 233
            E++ +M   G +P+  T++ L+ G C   +V+EA ++   +  +   KPDV TYTA++D
Sbjct: 133 CEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALID 192

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           GFCK G   +AM++L     R   PNVVT+++L +G CK G   + + L + M  + C+P
Sbjct: 193 GFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVP 252

Query: 294 -----------------------------------DKISYSTLLNGLLKWGKIRPAVSIF 318
                                              D +SY+ LL+G  + G+I  A  +F
Sbjct: 253 NVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLF 312

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIV 376
           KEM       D      L+RG C  S      LE+A  + E M K  +  DP   TY IV
Sbjct: 313 KEMATKSCLPDRITYTCLVRGFCNASR-----LEEARFLLENM-KTAAGIDPDVVTYSIV 366

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +    + K+  EA   +   I     P  +T++++I  LC  G++D A+ +L  M     
Sbjct: 367 VAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRV 426

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            PS  +++ +I  L +L    +A  L  A    G+ P
Sbjct: 427 EPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEP 463



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 171/327 (52%), Gaps = 9/327 (2%)

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            P V T+TI+++  CK+ +LK+AL   ++M R    PN +TYN ++ GLC      +AYE
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 212 MLMNVKN-DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-GVTPNVVTFNTLFNG 269
           +L  +++   + PD+ TY+ V++GFCK G  + A E+L E + R G+ P+VVT+ ++ +G
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV-RFGFEV 328
            C++G   +   +++ MK +   PDK ++S L+ G     K+  A+ ++KE++    ++ 
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D     +L+ G C KS      LE A ++   M  +  V +  TY  ++  L K    D+
Sbjct: 183 DVVTYTALIDGFC-KSGN----LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQ 237

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           AL         G +P  +T+  +I  LC   K+D A LL+  M      P   SY+ L+ 
Sbjct: 238 ALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLD 297

Query: 449 KLDQLEKSYDACALYGAALKQGVIPQR 475
              +L +  +A  L+     +  +P R
Sbjct: 298 GYCRLGRIEEAKQLFKEMATKSCLPDR 324



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 166/337 (49%), Gaps = 15/337 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L + +D+F  +   G   +V  +  L+  L   ++ + A     E ++    P++ 
Sbjct: 231 KAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTV 290

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ ++  YC      EA+++   M      P+  T+T LV   C + RL+EA  +L+ M
Sbjct: 291 SYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 350

Query: 182 -GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
               G  P++ TY+ ++ G     R  EA E +  +    + P+  TY++++DG CK GR
Sbjct: 351 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 410

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + AME+L   + + V P+V TFN++    C+ G   +   LL  M      P  ++Y+T
Sbjct: 411 VDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 470

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFE-------VDERMMNSLLRGLCMKSWEEKDLLED 353
           LL G  + G++  A  +F+ M +   +       V E+  ++L+RGLC K+ E    ++ 
Sbjct: 471 LLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLC-KARE----IDK 525

Query: 354 AYQVFEKM-TKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
           A  V E++ +++    +     IV   L  G +T+EA
Sbjct: 526 AMAVVEELRSRECEPAEEDCLAIVDGLLRAG-RTEEA 561



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 119/222 (53%), Gaps = 7/222 (3%)

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           ++ G+ P+  T+SI++  Y     F EA + I  M      PN  T++ L++ LCK+GR+
Sbjct: 352 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 411

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
             A+EVL  M     +P++ T+N ++  LC +G ++EA+++L+ +   GL+P + TYT +
Sbjct: 412 DHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTL 471

Query: 232 MDGFCKVGRSNEAMELLN----EAIERGVTPNVV---TFNTLFNGYCKEGTPMKGVGLLK 284
           ++GF + GR   A EL      +A +     N+V    F+ L  G CK     K + +++
Sbjct: 472 LEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVE 531

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            ++ R C P +     +++GLL+ G+   A  +   + + G 
Sbjct: 532 ELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 87/176 (49%), Gaps = 7/176 (3%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L      + A++      +  + P+  TF+ +I   C   D  EA K++  M 
Sbjct: 398 YSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMA 457

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI-------QTYNCLLKGL 200
            +G  P + T+T L+    ++GR++ A E+ + M +   K +        Q ++ L++GL
Sbjct: 458 AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGL 517

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           C    +++A  ++  +++   +P      A++DG  + GR+ EA +L+N   + G+
Sbjct: 518 CKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/207 (19%), Positives = 91/207 (43%), Gaps = 8/207 (3%)

Query: 23  IPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGT 81
           +  +++   F  A+    E +     P ++     +D + KA  +   +++  ++     
Sbjct: 367 VAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRV 426

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
             SV  FN ++ AL  L + + A K     +++GL P   T++ ++  +        A +
Sbjct: 427 EPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE 486

Query: 142 VIDCMFDNGYHPNVT-------TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
           + + M       +          F+ L+  LCK+  + +A+ V++++    C+P  +   
Sbjct: 487 LFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCL 546

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGL 221
            ++ GL   GR EEA +++ ++   GL
Sbjct: 547 AIVDGLLRAGRTEEAGKLINSISKVGL 573


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 187/358 (52%), Gaps = 20/358 (5%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           + +F  +L +LV +N   TA+    +    G+A N  T +I+I C+        +  V  
Sbjct: 60  IFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFA 119

Query: 145 CMFDNGYHPNVTTFTILV-------------NSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +   GY PNV T T L+             N LCK G+ + AL++L ++     +PN+ 
Sbjct: 120 NILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVV 179

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            YN ++  +C V  V EA+++   + ++G+ PDV TY+A++ GF  VG+  +A++L N+ 
Sbjct: 180 MYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKM 239

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I   + P+V TFN L +G+CK+G   +G  +  +M K+   P+ ++Y +L++G     ++
Sbjct: 240 ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQV 299

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
             A SIF  M + G   D +  N ++ G C +K  +E      A  +F+KM  K  + + 
Sbjct: 300 NKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDE------AMNLFKKMHCKNIIPNV 353

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            TY  +I  L K  K   AL  +    + G  P  IT+++++ ALC   ++DKA+ LL
Sbjct: 354 VTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL 411



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 189/389 (48%), Gaps = 12/389 (3%)

Query: 45  LKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA 104
           L +NP S     F + +K       I +   IK  G    VS +  L+  L  + +   A
Sbjct: 108 LGQNPLSFSV--FANILKKGYDPNVITLTTLIK--GLCLKVS-YGTLINGLCKVGQARAA 162

Query: 105 VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
           ++         + PN   ++ +I   C      EA  +   M   G  P+V T++ L++ 
Sbjct: 163 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISG 222

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
               G+LK+A+++ ++M     KP++ T+N L+ G C  G+++E   +   +   G+KP+
Sbjct: 223 FFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 282

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V TY ++MDG+C V + N+A  + N   + GV P+  ++N + NG+CK     + + L K
Sbjct: 283 VVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFK 342

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            M  +N +P+ ++Y++L++GL K GKI  A+ +  EM   G   D    +S+L  LC   
Sbjct: 343 KMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNH 402

Query: 345 WEEKDL-----LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
             +K +     L+D  QVFE +  K    D   Y ++I+        +EAL  L    + 
Sbjct: 403 QVDKAIALLTKLKD--QVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDN 460

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLL 428
           G IP   T+  +I +L  + + D A  LL
Sbjct: 461 GRIPDAKTYEIIILSLFKKDENDMAEKLL 489



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 174/370 (47%), Gaps = 34/370 (9%)

Query: 33  AAASLSTAESLDLK-ENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFND 90
           A A+L     +D K   P  +     +D + K   + E  D++  +  +G +  V  ++ 
Sbjct: 159 ARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSA 218

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    ++ + + A+  F++     + P+ +TF+I++  +C      E + V   M   G
Sbjct: 219 LISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG 278

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PNV T+  L++  C   ++ +A  + + M + G  P+ Q+YN ++ G C + +V+EA 
Sbjct: 279 IKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAM 338

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +    + P+V TYT+++DG CK G+ + A++L++E  +RGV P+++T++++ +  
Sbjct: 339 NLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDAL 398

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK     K + LL  +K +                           +F+++   G+ +D 
Sbjct: 399 CKNHQVDKAIALLTKLKDQ---------------------------VFEDLFVKGYNLDV 431

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                +++G C+K      L  +A  +  KM     + D  TY I+I +L K  + D A 
Sbjct: 432 YAYTVMIQGFCVKG-----LFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAE 486

Query: 391 IHLHHAIEMG 400
             L   I  G
Sbjct: 487 KLLREMIARG 496



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 152/353 (43%), Gaps = 43/353 (12%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +  F  ++ SL K      A+ +  QM   G   N+ T N L+     +G+   ++ +
Sbjct: 58  PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117

Query: 213 LMNVKNDGLKPDVYT-------------YTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
             N+   G  P+V T             Y  +++G CKVG++  A++LL     + V PN
Sbjct: 118 FANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPN 177

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VV +NT+ +  CK     +   L   M      PD ++YS L++G    GK++ A+ +F 
Sbjct: 178 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFN 237

Query: 320 EMVRFGFEVDERMMNSLLRGLC---------------MKSWEEKDL-----LEDAYQVFE 359
           +M+    + D    N L+ G C               MK   + ++     L D Y + +
Sbjct: 238 KMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVK 297

Query: 360 KMTKKVSV----------TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
           ++ K  S+           D  +Y I+I    K KK DEA+           IP  +T+ 
Sbjct: 298 QVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYT 357

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           ++I  LC  GKI  AL L+  M++    P   +Y  ++  L +  +   A AL
Sbjct: 358 SLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 410



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/229 (18%), Positives = 98/229 (42%), Gaps = 8/229 (3%)

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           ++  TP +  F  +     K       + L + M+ +    + ++ + L+N   + G+  
Sbjct: 53  QKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNP 112

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMK--------SWEEKDLLEDAYQVFEKMTKK 364
            + S+F  +++ G++ +   + +L++GLC+K           +      A Q+  ++  K
Sbjct: 113 LSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGK 172

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +   +   Y  +I ++ K K  +EA       +  G  P  +T++ +I      GK+  A
Sbjct: 173 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDA 232

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + L   M      P   ++++L+    +  K  +   ++   +KQG+ P
Sbjct: 233 IDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP 281


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 204/429 (47%), Gaps = 36/429 (8%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           + +D    +   F+    AL  L   + A+      + +G  P++  +  +I   C +  
Sbjct: 163 VHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGG 222

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA  ++D MF  G   +V TF  +V+ LC  GRL+EA  ++D+M   GC PN  TY  
Sbjct: 223 VNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGF 282

Query: 196 LLKGLCYVGRVEEAYEMLMNVK-------------------------------NDGLKPD 224
           LLKGLC   +VEEA  ML  V                                + G  PD
Sbjct: 283 LLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPD 342

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
            +TY+ ++ G CK+GR   AM+LL E  ++G  P++VT+  L + +C+ G       +L+
Sbjct: 343 AHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLE 402

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           +M  +    +   Y+ ++  + K  ++  A+   +EM   G++ D    N+++  LC   
Sbjct: 403 VMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLC--- 459

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
               + +E+A  +FE +  +  V +  TY  +I  L +     +A+   +  +  G    
Sbjct: 460 --NNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLD 517

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            +++N +I+ALC +G +D++++LL  M E    P+  SY++LI++L +  +  DA  L  
Sbjct: 518 IVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSK 577

Query: 465 AALKQGVIP 473
             L Q + P
Sbjct: 578 EMLNQELTP 586



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 201/451 (44%), Gaps = 54/451 (11%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   + D +   G +  V+ FND++  L  L     A +        G  PN+ T+  
Sbjct: 223 VNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGF 282

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHP--NVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           +++  C  +   EAR ++      G  P  NV  F  ++      G+LKEA E+ + MG 
Sbjct: 283 LLKGLCLASQVEEARTML------GRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGS 336

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG---- 239
            GC P+  TY+ L+ GLC +GR+  A ++L  +++ G  P + TYT ++  FC+ G    
Sbjct: 337 KGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDN 396

Query: 240 -------------------------------RSNEAMELLNEAIERGVTPNVVTFNTLFN 268
                                          R ++AM  + E   +G  P++ T+NT+  
Sbjct: 397 IRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIY 456

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
             C      +   L + +     + + I+Y+TL++ LL+ G  + A+S+  +MV  G  +
Sbjct: 457 HLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSL 516

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D    N L++ LC     ++ ++     +  +M +K    +  +Y ++I  L K ++  +
Sbjct: 517 DIVSYNGLIKALCRDGNVDRSIM-----LLSEMAEKGIKPNNVSYNLLISELCKTRRVRD 571

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE---HAKIPSRTSYDM 445
           AL      +     P  +T+N +I  LC  G +  AL LL  ++    HA I    +Y++
Sbjct: 572 ALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADI---ITYNI 628

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           LI+   +    +DA  L   A+  G+ P  +
Sbjct: 629 LISWHCKARLLHDASMLLNRAVTSGITPNER 659



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 175/348 (50%), Gaps = 5/348 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LKE  ++++++   G       ++ L+  L  L    +A+K   E    G AP+  T++I
Sbjct: 324 LKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTI 383

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  +C    +   R +++ M D G   N+  +  ++ ++CK  R+ +A+  + +M   G
Sbjct: 384 LLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQG 443

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KP+I TYN ++  LC   ++EEA  +  N+ ++G+  +  TY  ++    + G   +A+
Sbjct: 444 YKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAI 503

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L N+ +  G + ++V++N L    C++G   + + LL  M ++   P+ +SY+ L++ L
Sbjct: 504 SLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISEL 563

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++R A+ + KEM+      D    N+L+ GLC   W     +  A  + EK+  + 
Sbjct: 564 CKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGW-----MHAALNLLEKLHNED 618

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
              D  TY I+I    K +   +A + L+ A+  G  P   T+  ++Q
Sbjct: 619 VHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQ 666



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 138/273 (50%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + + +   G + ++  +N ++ A+      + A++F  E  S G  P+  T++ +I   C
Sbjct: 400 MLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLC 459

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N N   EA  + + +   G   N  T+  L+++L ++G  ++A+ + + M   GC  +I 
Sbjct: 460 NNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIV 519

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           +YN L+K LC  G V+ +  +L  +   G+KP+  +Y  ++   CK  R  +A+EL  E 
Sbjct: 520 SYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEM 579

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           + + +TP++VT+NTL NG CK G     + LL+ +   +   D I+Y+ L++   K   +
Sbjct: 580 LNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLL 639

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
             A  +    V  G   +ER    +++    KS
Sbjct: 640 HDASMLLNRAVTSGITPNERTWGIMVQNFVRKS 672



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 109/204 (53%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+++  +G   +   +N L+ AL+     + A+   ++   +G + +  +++ +I+  C
Sbjct: 470 LFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALC 529

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +   +  ++  M + G  PN  ++ +L++ LCK+ R+++ALE+  +M      P+I 
Sbjct: 530 RDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIV 589

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ GLC +G +  A  +L  + N+ +  D+ TY  ++   CK    ++A  LLN A
Sbjct: 590 TYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRA 649

Query: 252 IERGVTPNVVTFNTLFNGYCKEGT 275
           +  G+TPN  T+  +   + ++ T
Sbjct: 650 VTSGITPNERTWGIMVQNFVRKST 673



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 137/331 (41%), Gaps = 34/331 (10%)

Query: 174 ALEVLDQM-GRIGCKPNIQTYNCLLKGL----CYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           AL +LDQ+  R    P+ ++YN +L       C+   +     M   V  D + P  +T+
Sbjct: 119 ALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRM---VHRDRVPPTTFTF 175

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           +      C++GR++EA+ +L      G  P+ V + T+ +  C +G   +   LL  M  
Sbjct: 176 SIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFL 235

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
             C  D  +++ +++GL   G++R A  +   M+  G   +      LL+GLC+ S  E+
Sbjct: 236 MGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEE 295

Query: 349 DL--------------------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
                                       L++A +++E M  K    D  TY I+I  L K
Sbjct: 296 ARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCK 355

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
             +   A+  L    + G  P  +T+  ++ + C  G  D    +L +M +     +   
Sbjct: 356 LGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEG 415

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           Y+ +I  + +  +  DA         QG  P
Sbjct: 416 YNGMICAVCKDRRMDDAMRFMQEMKSQGYKP 446


>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
 gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
          Length = 321

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 162/301 (53%), Gaps = 5/301 (1%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M + G  P V TF ILV+ LCK+ RL +A E+++ M   GC PN   +N ++  LC  GR
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
             EAY  +  +++ G+ P + TY  ++DGFCK  + + A+E+L E   RG  PN VT+NT
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
             +G CK G     + L + M ++    D   Y+TL++GL + GK+  A S+  EM   G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   N++L  LC  S      + +A+++F++MT    + D  T+G+++    +G +
Sbjct: 181 CVPKPGCYNAILSWLCKGSR-----INEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHR 235

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+AL+ L      G  PR + +N +I AL   G++ +A  LL  M      P+  +Y +
Sbjct: 236 IDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYAL 295

Query: 446 L 446
           +
Sbjct: 296 M 296



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 148/296 (50%), Gaps = 5/296 (1%)

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC P + T+  L+ GLC   R+ +A+E++  +   G  P+   +  +MD  CK GR
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           S EA   +      GV+P +VT+N L +G+CKE    + + +L+ M  R   P+ ++Y+T
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
            L+GL K+GK+  A+++F+ M      +D     +L+ GLC     +   L +AY + ++
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLC-----QAGKLAEAYSLLDE 175

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M     V  PG Y  ++  L KG + +EA          G +P  +TF  ++   C   +
Sbjct: 176 MENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHR 235

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           ID ALLLL  M      P    Y+ LI  L++  +  +A  L    + +G+ P  +
Sbjct: 236 IDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSR 291



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 133/270 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA+ L +  ++ + + + G   +   FN ++ AL        A  +     S G++P   
Sbjct: 22  KANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETMRSMGVSPTIV 81

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I  +C +     A +++  M   G+ PN  T+   ++ LCK G++ +AL +   M
Sbjct: 82  TYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAM 141

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                + ++  Y  L+ GLC  G++ EAY +L  ++N G  P    Y A++   CK  R 
Sbjct: 142 TEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRI 201

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           NEA +L       G+ P+ +TF  +  GYC+       + LL+ MK     P ++ Y+TL
Sbjct: 202 NEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTL 261

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           ++ L + G++  A  + +EM+  G   + R
Sbjct: 262 IDALNRAGRVSEAYRLLQEMISRGLSPNSR 291



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 145/306 (47%), Gaps = 10/306 (3%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  F  L+  L   N    A +     +  G  PN+  F+ ++   C +    EA   I
Sbjct: 9   TVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYI 68

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           + M   G  P + T+ IL++  CK  +L  ALE+L +M   G +PN  TYN  L GLC  
Sbjct: 69  ETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKY 128

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G+V++A  +   +    ++ DVY YT ++DG C+ G+  EA  LL+E    G  P    +
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCY 188

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N + +  CK     +   L K M     LPD +++  ++ G  +  +I  A+ + ++M  
Sbjct: 189 NAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKS 248

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G    E + N+L+  L          + +AY++ ++M  +    +  TY ++     + 
Sbjct: 249 AGLAPREVIYNTLIDAL-----NRAGRVSEAYRLLQEMISRGLSPNSRTYALM-----RK 298

Query: 384 KKTDEA 389
           ++TD++
Sbjct: 299 QQTDDS 304



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 63/137 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L E   + D ++  G       +N +L  L   +    A K F   +  G+ P+  
Sbjct: 162 QAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWL 221

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF +M+  YC  +   +A  ++  M   G  P    +  L+++L ++GR+ EA  +L +M
Sbjct: 222 TFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEM 281

Query: 182 GRIGCKPNIQTYNCLLK 198
              G  PN +TY  + K
Sbjct: 282 ISRGLSPNSRTYALMRK 298


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 193/389 (49%), Gaps = 5/389 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE  D+FD++   G N  V  +  +L               F      G+AP+ +
Sbjct: 338 KYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 397

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+++I+ Y N     +A  + + M D+G  P+V T+  ++ +LC+ G++ +A+E  +QM
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+   Y+CL++G C  G + +A E++  + N+G++ D+  + ++++  CK+GR 
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  + +  +  G+ P+ V +N L +GYC  G   K + +   M      P+ + Y TL
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG  K G+I   +S+F+EM++ G +    + N ++ GL      E      A   F +M
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF-----EAGRTVPAKVKFHEM 632

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           T+     +  TY IV+R L K +  DEA+        M      IT N +I  +    ++
Sbjct: 633 TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 692

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++A  L   +     +P   +Y ++IT L
Sbjct: 693 EEAKDLFASISRSGLVPCAVTYSIMITNL 721



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 209/437 (47%), Gaps = 30/437 (6%)

Query: 60  RIKASPLK--ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET-------AVKFFSE 110
           R++   L+  E  D+ D +++ GT     D N  L AL               AV  F+ 
Sbjct: 39  RVREGTLRPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNR 98

Query: 111 ASSYG-----LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           A+S       L+P S+T++I++ C    +    A      +   G   +    + L+   
Sbjct: 99  AASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGF 158

Query: 166 CKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LK 222
           C++ R  EAL++L  +   +GC P++ +YN LLK LC  G+  +A ++L  +   G    
Sbjct: 159 CEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCS 218

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           PDV  Y  V+DGF K G  N+A +L  E ++RG+ P++VT++++ +  CK     K    
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L+ M  +  LPD  +Y+ L+ G    G+ + AV +FKEM R     D   +N+L+  LC 
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLC- 337

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM--- 399
               +   +++A  VF+ M  K    D  +Y I++     G  T   L+ +    ++   
Sbjct: 338 ----KYGKIKEARDVFDTMAMKGQNPDVFSYTIML----NGYATKGCLVDMTDLFDLMLG 389

Query: 400 -GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G  P   TFN +I+A    G +DKA+++   M +H   P   +Y  +I  L ++ K  D
Sbjct: 390 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449

Query: 459 ACALYGAALKQGVIPQR 475
           A   +   + QGV+P +
Sbjct: 450 AMEKFNQMIDQGVVPDK 466



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 176/369 (47%), Gaps = 8/369 (2%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           NW+   +N+L+       + + AV+ F E     + P+    + ++   C      EAR 
Sbjct: 291 NWT---YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V D M   G +P+V ++TI++N     G L +  ++ D M   G  P+I T+N L+K   
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 407

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G +++A  +   +++ G+KP V TY  V+   C++G+ ++AME  N+ I++GV P+  
Sbjct: 408 NCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKY 467

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            ++ L  G+C  G+ +K   L+  +       D + + +++N L K G++  A +IF   
Sbjct: 468 AYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLT 527

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           V  G   D  + N L+ G C+    EK     A +VF+ M       +   YG ++    
Sbjct: 528 VNVGLHPDAVVYNMLMDGYCLVGKMEK-----ALRVFDAMVSAGIEPNVVGYGTLVNGYC 582

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K  + DE L      ++ G  P TI +N +I  L   G+   A +    M E     ++ 
Sbjct: 583 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 642

Query: 442 SYDMLITKL 450
           +Y +++  L
Sbjct: 643 TYSIVLRGL 651



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/406 (23%), Positives = 183/406 (45%), Gaps = 7/406 (1%)

Query: 71  DIFDSIKKDGTNWS--VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
           D+   + + GT  S  V  +N ++       +   A   F E    G+ P+  T+S ++ 
Sbjct: 205 DLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVH 264

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
             C      +A   +  M + G  P+  T+  L+     +G+ KEA+ V  +M R    P
Sbjct: 265 ALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP 324

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           ++   N L+  LC  G+++EA ++   +   G  PDV++YT +++G+   G   +  +L 
Sbjct: 325 DVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLF 384

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +  +  G+ P++ TFN L   Y   G   K + +   M+     P  ++Y T++  L + 
Sbjct: 385 DLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRI 444

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           GK+  A+  F +M+  G   D+   + L++G C        LL+    + E M   + + 
Sbjct: 445 GKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG----SLLKAKELISEIMNNGMRL- 499

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D   +G +I  L K  +  +A       + +G  P  + +N ++   C  GK++KAL + 
Sbjct: 500 DIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 559

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             M      P+   Y  L+    ++ +  +  +L+   L++G+ P 
Sbjct: 560 DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 605



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 125/274 (45%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   I  +G    +  F  ++  L  L     A   F    + GL P++  +++++  Y
Sbjct: 487 ELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGY 546

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A +V D M   G  PNV  +  LVN  CK GR+ E L +  +M + G KP+ 
Sbjct: 547 CLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPST 606

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             YN ++ GL   GR   A      +   G+  +  TY+ V+ G  K    +EA+ L  E
Sbjct: 607 ILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE 666

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
                V  +++T NT+  G  +     +   L   + +   +P  ++YS ++  LLK G 
Sbjct: 667 LRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGL 726

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           +  A  +F  M   G E D R++N ++R L  K+
Sbjct: 727 VEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKN 760



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 103/241 (42%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +IFD     G +     +N L+    ++ + E A++ F    S G+ PN   +  ++  Y
Sbjct: 522 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      E   +   M   G  P+   + I+++ L ++GR   A     +M   G   N 
Sbjct: 582 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 641

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY+ +L+GL      +EA  +   ++   +K D+ T   ++ G  +  R  EA +L   
Sbjct: 642 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 701

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G+ P  VT++ +     KEG   +   +   M+   C PD    + ++  LLK  +
Sbjct: 702 ISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 761

Query: 311 I 311
           I
Sbjct: 762 I 762



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/265 (20%), Positives = 114/265 (43%), Gaps = 12/265 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ + +FD++   G   +V  +  L+     +   +  +  F E    G+ P++  ++I
Sbjct: 552 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 611

Query: 126 MIRCYCNKNDFFEARKVIDC------MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           +I      +  FEA + +        M ++G   N  T++I++  L K+    EA+ +  
Sbjct: 612 II------DGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFK 665

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           ++  +  K +I T N ++ G+    RVEEA ++  ++   GL P   TY+ ++    K G
Sbjct: 666 ELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEG 725

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
              EA ++ +     G  P+    N +     K+   ++    L  + +RN   + ++  
Sbjct: 726 LVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAM 785

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRF 324
            L++     G  R  +        F
Sbjct: 786 LLVDLFSSKGTCREQIRFLPAKYHF 810



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 93/214 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F  + + G   S   +N ++  L        A   F E +  G+A N  
Sbjct: 583 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 642

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI++R       F EA  +   +       ++ T   ++  + ++ R++EA ++   +
Sbjct: 643 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 702

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  P   TY+ ++  L   G VEEA +M  +++N G +PD      V+    K    
Sbjct: 703 SRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 762

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
             A   L++  ER  +   +T   L + +  +GT
Sbjct: 763 VRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGT 796


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 212/457 (46%), Gaps = 39/457 (8%)

Query: 50  RSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFF 108
           R     + ++R+ K     E +   + + K G    V     L+  L      E AV+  
Sbjct: 76  RDTHHMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVM 135

Query: 109 SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS 168
                YG  P+S+ ++ +I  +C  + F  A +VI  M   G+ P+V T+ IL+ SLC  
Sbjct: 136 EILEQYG-DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCAR 194

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G+L  AL+V+DQ+    C P + TY  L++     G +++A  +L  + + GL+PD+YTY
Sbjct: 195 GKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTY 254

Query: 229 TAVMDGFCKVGRSNEAME--------------------------------LLNEAIERGV 256
             ++ G CK G  + A E                                L+++ I +G 
Sbjct: 255 NVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGC 314

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            PN+VT++ L +  C++G   + V +L++MK++   PD   Y  L++   K GK+  A+ 
Sbjct: 315 EPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIG 374

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
              +M+  G+  D    N+++  LC     +K   ++A  +F+K+ +     +  +Y  +
Sbjct: 375 FVDDMISAGWLPDIVNYNTIMGSLC-----KKGRADEALNIFKKLEEVGCPPNASSYNTM 429

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
              L        AL  +   +  G  P  IT+N++I +LC +G +D+A+ LL  M     
Sbjct: 430 FGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEW 489

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            P+  SY++++  L +  +  DA  +    +  G  P
Sbjct: 490 QPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQP 526



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 119/244 (48%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E   +  S+    G  PN  T+S++I   C      EA  V+  M + G +P+   +  L
Sbjct: 300 EAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPL 359

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +++ CK G++  A+  +D M   G  P+I  YN ++  LC  GR +EA  +   ++  G 
Sbjct: 360 ISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGC 419

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P+  +Y  +       G    A+ ++ E +  GV P+ +T+N+L +  C++G   + +G
Sbjct: 420 PPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIG 479

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           LL  M++    P  ISY+ +L GL K  +I  A+ +   MV  G + +E     L+ G+ 
Sbjct: 480 LLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVG 539

Query: 342 MKSW 345
              W
Sbjct: 540 YAGW 543



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 119/243 (48%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   ++  ++ L+ +L    +   AV         GL P+++ +  +I  +C +     A
Sbjct: 313 GCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLA 372

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
              +D M   G+ P++  +  ++ SLCK GR  EAL +  ++  +GC PN  +YN +   
Sbjct: 373 IGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGA 432

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           L   G    A  M++ + ++G+ PD  TY +++   C+ G  +EA+ LL +       P 
Sbjct: 433 LWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPT 492

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           V+++N +  G CK    +  + +L +M    C P++ +Y+ L+ G+   G    AV + K
Sbjct: 493 VISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAK 552

Query: 320 EMV 322
            +V
Sbjct: 553 SLV 555


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 223/469 (47%), Gaps = 29/469 (6%)

Query: 19  NHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKK 78
           +H     F+ L    AA L  + S           A R  D ++A     R+D F S   
Sbjct: 115 SHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAF---SRMDEFQS--- 168

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
                +   +N +L ALV       A+  ++   + G APN  T+++++   C +    +
Sbjct: 169 ---RPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGD 225

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A K+ D M D G  PNV  +T+L++SLC +G++ EA+++L  M   GC P+  TYN  L 
Sbjct: 226 ALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLS 285

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC VGRV EA++ L+ +++ G    +  Y+ ++DG  +  R +E        +ER ++P
Sbjct: 286 GLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP 345

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           +VV +  +  G  + G     +  L +MKK+  +PD   Y+T+L  L   G +  A ++ 
Sbjct: 346 DVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLR 405

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
            EM++    +D      ++ GLC     ++ L+++A Q+F++M +        TY  +I 
Sbjct: 406 SEMLQNNLVLDSTTQTIMICGLC-----KRGLVDEAMQIFDEMGEHGCDPTVMTYNALID 460

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPR-----TITFNNV---------IQALCGEGKIDKA 424
              +  + +EA + L H +EMG+ P      T+  N V         +  +C  G++ KA
Sbjct: 461 GFYREGRLEEARM-LFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKA 519

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             LL  + +   +P   +Y+ LI  L +      A  L+     +G+ P
Sbjct: 520 YKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISP 568



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 195/409 (47%), Gaps = 9/409 (2%)

Query: 23  IPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTN 82
           IP  ++L +F    L +A S  L+  P    A   + R+ +   +   D     +  G  
Sbjct: 79  IPAASRLRLF----LFSALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLP 134

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
            S S F  L+ A         AV+ FS    +   P ++ ++ +++   +      A  +
Sbjct: 135 ASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALAL 194

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
            + M   G  PN  T+ +L++ LCK G   +AL++ D+M   G  PN++ Y  LL  LC 
Sbjct: 195 YNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCN 254

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            G+++EA ++L ++K+ G  PD  TY A + G CKVGR NEA + L    + G    +  
Sbjct: 255 AGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKG 314

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           ++ L +G  +     +G G  K M +RN  PD + Y+ ++ G  + G+I  A+S    M 
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
           + GF  D    N++L+ LC    +  D LE A+ +  +M +   V D  T  I+I  L K
Sbjct: 375 KKGFVPDTFCYNTVLKVLC----DHGD-LERAHTLRSEMLQNNLVLDSTTQTIMICGLCK 429

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
               DEA+       E G  P  +T+N +I     EG++++A +L   M
Sbjct: 430 RGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 186/406 (45%), Gaps = 46/406 (11%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A+ F       G  P+++ ++ +++  C+  D   A  +   M  N    + TT TI+
Sbjct: 364 EDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIM 423

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +  LCK G + EA+++ D+MG  GC P + TYN L+ G    GR+EEA  ML +    G 
Sbjct: 424 ICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA-RMLFHKMEMGN 482

Query: 222 KPDVY--------------TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            P ++              +   ++   C+ G+  +A +LL   I+ GV P+VVT+NTL 
Sbjct: 483 NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLI 542

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG CK       V L K ++ +   PD+I+Y TL++GLL+  +   A+ +F+ +++ G  
Sbjct: 543 NGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSS 602

Query: 328 VDERMMNSLLRGLC-MKSWE------------------EKDLLEDAYQVFE--------- 359
               + NS++R LC MK                     E ++L +A++  E         
Sbjct: 603 PSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVR 662

Query: 360 ---KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
              K+ ++        Y I +  L + ++TD+AL   H   E G          +I  LC
Sbjct: 663 ELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLC 722

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
            +  ++ A+ ++      + I S+   + L+  L    +  DA AL
Sbjct: 723 WDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQAL 768



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 46/267 (17%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A K        G+ P+  T++ +I   C   +   A ++   +   G  P+  T+  L++
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLID 578

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY------------- 210
            L ++ R  +A+ +   + + G  P++  YN +++ LC + ++ +A              
Sbjct: 579 GLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNF 638

Query: 211 ----EMLMNVK--------NDGLKPDVYT-----------YTAVMDGFCKVGRSNEAMEL 247
               E+L N          +DG++  +             YT  + G C+V R+++A+ +
Sbjct: 639 PVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRI 698

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG-LLKLMKKRNCLPDKISYSTLLNGLL 306
            +   E G+         L N  C +      V  +L  + K   L   +      N LL
Sbjct: 699 FHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVG-----NRLL 753

Query: 307 KWGKI----RPAVSIFKEMVRFGFEVD 329
           +W  I    + A ++   M   G+++D
Sbjct: 754 RWLCICYRRQDAQALAWRMHLVGYDMD 780


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 199/387 (51%), Gaps = 8/387 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           F+ LL A+V +    TA+  FS+  S G+ P+  T +I+I CYC++     A  ++  + 
Sbjct: 58  FDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTIL 117

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEV-LDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
             G+ PN+ TF  L+N  C +G + +A+   LD M + G   +  +Y  L+ GLC  G+ 
Sbjct: 118 KMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAK-GYPLDEFSYGSLINGLCKNGQT 176

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            +A ++L  ++ D ++P++ TY+ V+DG CK     +A+ L +    RG+  +VV +N+L
Sbjct: 177 RDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSL 236

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G C  G   +   LL +M + N  PD  +++ L++ L K G+I  A  +F  M++ G 
Sbjct: 237 IHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGE 296

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + D    N+L+ G C+ +      + +A ++F +M K+    D   Y ++I    K    
Sbjct: 297 KPDIVTYNALMEGFCLSNN-----VSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMV 351

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           DEA++          +P   T+N++I  LC  G++     L+  M +  + P   +Y++ 
Sbjct: 352 DEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIF 411

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           +    + +    A +L+   + QG+ P
Sbjct: 412 LDAFCKSKPYEKAISLF-RQIVQGIWP 437



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 184/385 (47%), Gaps = 6/385 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+  L    +   A++   +     + PN  T+S +I   C      +A ++   + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G   +V  +  L++  C  G+ +EA  +L  M R    P+  T+N L+  LC  GR+ 
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  +   +   G KPD+ TY A+M+GFC     +EA EL N  ++RG+ P+V+ +N L 
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NGYCK     + + L K ++ +N +P+  +Y++L++GL K G++     +  EM   G  
Sbjct: 343 NGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQS 402

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    N  L   C     EK     A  +F ++ + +   D   Y +++    KG+K  
Sbjct: 403 PDIVTYNIFLDAFCKSKPYEK-----AISLFRQIVQGIW-PDFYMYDVIVENFCKGEKLK 456

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            A   L H +  G  P   T+  +I ALC +   D+A+ LL  M ++   P   +++ +I
Sbjct: 457 IAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETII 516

Query: 448 TKLDQLEKSYDACALYGAALKQGVI 472
             L +  ++  A  L    +++G++
Sbjct: 517 GALQERNETDKAEKLRLEMIERGLV 541



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 2/284 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        VD + K   + E   +F  + K G    +  +N L+    + N    A +
Sbjct: 262 NPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARE 321

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F+     GL P+   ++++I  YC  +   EA  +   +      PN+ T+  L++ LC
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLC 381

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K GR+    E++D+M   G  P+I TYN  L   C     E+A  +   +   G+ PD Y
Sbjct: 382 KLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFY 440

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            Y  +++ FCK  +   A E L   +  G  PNV T+  + N  CK+ +  + + LL  M
Sbjct: 441 MYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKM 500

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
              +C PD +++ T++  L +  +   A  +  EM+  G   DE
Sbjct: 501 DDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDE 544



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/281 (18%), Positives = 107/281 (38%), Gaps = 65/281 (23%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P ++ +  ++    ++G    A+ L ++   +G+TP++ T   L N YC +         
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQA-------- 104

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
                        +S+               A S+   +++ GF+ +    N+L+ G C+
Sbjct: 105 ------------HLSF---------------AFSLLGTILKMGFQPNMVTFNTLINGFCI 137

Query: 343 KSWEEK------DLL------------------------EDAYQVFEKMTKKVSVTDPGT 372
                K      DL+                         DA Q+ +KM + +   +  T
Sbjct: 138 NGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLIT 197

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y  VI  L K +   +AL         G +   + +N++I   C  G+  +A  LL +M 
Sbjct: 198 YSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMV 257

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                P   ++++L+  L +  +  +A  ++   +K+G  P
Sbjct: 258 RGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKP 298


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 195/365 (53%), Gaps = 10/365 (2%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           ++ +++ D ++ +G   +   +N L+  +    + + A++      S+G  P++  ++ +
Sbjct: 219 RQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTV 278

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++  C+   + +A +++  M      PN  TF +++ SLC+ G L++A+++L++M + GC
Sbjct: 279 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 338

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
             NI TYN ++ GLC    V+ A  +L  +K+ G KPD+ TY  ++ G C   +  +A E
Sbjct: 339 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEE 398

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L++   + G  P+ VTFNTL    C++G  +  + + K M  + C P+ I+YST+++GL 
Sbjct: 399 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 458

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K  K+  A+ +F EM   GF  D+      +  L  +   + D +E+A Q   K+    S
Sbjct: 459 KATKLDQALELFNEMGHKGFNPDK------IYQLLAECLNDDDTIEEAIQTVRKLQD--S 510

Query: 367 VTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              P T  Y  ++  L +  KT+ A+  + + +  G +P  +T+  +I+ L  EG +++A
Sbjct: 511 GISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEA 570

Query: 425 LLLLF 429
             LL 
Sbjct: 571 RELLI 575



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 186/400 (46%), Gaps = 45/400 (11%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L    +   A+    +    G AP+  T++I++   C    + +A ++ID M 
Sbjct: 170 YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 229

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PN  T+ +L++ +C  G + +ALE+L  +   GCKP+   YN +LKGLC   R  
Sbjct: 230 AEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWG 289

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A E++  +  +   P+  T+  V+   C+ G   +A++LL +  + G T N+VT+N + 
Sbjct: 290 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 349

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG C++      +GLL  MK   C PD ++Y+TLL GL    +   A  +   M + G  
Sbjct: 350 NGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCL 409

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    N+L+  LC     +K L+ DA +VF++M  K    +  TY  +I  L K  K D
Sbjct: 410 PDNVTFNTLIGFLC-----QKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 464

Query: 388 EALIHLHHAIEMGH-------------------------------------IPRTITFNN 410
           +AL   +   EMGH                                      P T+ +N 
Sbjct: 465 QALELFN---EMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 521

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++  LC  GK + A+ ++  M     +P   +Y +LI  L
Sbjct: 522 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL 561



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 170/359 (47%), Gaps = 42/359 (11%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN++T++ +I   C +    +A  V+D M   G  P+V T+ IL+ + CK    ++A+E+
Sbjct: 165 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 224

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           +D M   GC PN  TYN L+ G+C  G V++A E+L N+ + G KP    Y  V+ G C 
Sbjct: 225 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 284

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R  +A EL+ E +     PN  TFN +    C++G   + + LL+ M K  C  + ++
Sbjct: 285 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 344

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQ 356
           Y+ ++NGL +   +  A+ +  +M  +G + D    N+LL+GLC  + W       DA +
Sbjct: 345 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWV------DAEE 398

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           + + MT+                                    G +P  +TFN +I  LC
Sbjct: 399 LMDNMTQN-----------------------------------GCLPDNVTFNTLIGFLC 423

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            +G +  A+ +   M +    P+  +Y  +I+ L +  K   A  L+     +G  P +
Sbjct: 424 QKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK 482



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 182/385 (47%), Gaps = 20/385 (5%)

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           L ALV   + + A++    +      P++   + ++R  C +    +A +V+      G 
Sbjct: 78  LSALVHRGDLDAALRLVESSPR---PPDAALANRLVRDLCRRGRPDDAERVVGAC---GP 131

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
              V  +  L +  C++GRL +A  V+   G +  +PN  TYN L+  LC  G+V +A  
Sbjct: 132 AATVVAYGALTDGYCRAGRLGDARRVV---GGMPVQPNAYTYNPLIHTLCERGQVRDALS 188

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +L ++   G  PDV TY  +++  CK     +AMEL++     G TPN VT+N L +G C
Sbjct: 189 VLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMC 248

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL---KWGKIRPAVSIFKEMVRFGFEV 328
            EG     + LL+ +    C P  ++Y+T+L GL    +WG    A  +  EM+R     
Sbjct: 249 GEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGD---ADELVTEMLRENCPP 305

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +E   N ++  LC      K LL+ A Q+ EKM+K     +  TY  +I  L + +  D 
Sbjct: 306 NEATFNVVIYSLC-----RKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDG 360

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A+  L      G  P  +T+N +++ LC   +   A  L+  M ++  +P   +++ LI 
Sbjct: 361 AMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIG 420

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L Q     DA  ++     +G  P
Sbjct: 421 FLCQKGLMVDAIEVFKQMPDKGCTP 445



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 43/276 (15%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ I + + + K G   ++  +N ++  L      + A+   S+  SYG  P+  T++ 
Sbjct: 323 LQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNT 382

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C+   + +A +++D M  NG  P+  TF  L+  LC+ G + +A+EV  QM   G
Sbjct: 383 LLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKG 442

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEA-----------------YEMLMNVKND--------- 219
           C PN  TY+ ++ GL    ++++A                 Y++L    ND         
Sbjct: 443 CTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQ 502

Query: 220 --------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
                   G+ P    Y A++ G C+ G++  A++++   +  G  P+ +T+  L  G  
Sbjct: 503 TVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLA 562

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            EG          L + R  L    S   L+N L+K
Sbjct: 563 YEG---------YLNEARELLIKLCSRDVLVNSLIK 589


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 198/434 (45%), Gaps = 42/434 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E I+IF  +++D    +V  +  ++ AL     +  A+  FSE    G  PN  T+++
Sbjct: 55  VDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTV 114

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI   C +    E R+++D M + G  P+V T+  L++  CK G ++ A E+LD M    
Sbjct: 115 MINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174

Query: 186 CKPNIQ-----------------------------------TYNCLLKGLCYVGRVEEAY 210
           C PN +                                   TYN L+ G C +G ++ AY
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAY 234

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L  +  +G+ PD +TY+  +D  CK GR  EA  L N   E+G+  N V +  L +GY
Sbjct: 235 RLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGY 294

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G       LL  M   +CLP+  +Y+ L++GL K  K++ A+ + + M++ G +   
Sbjct: 295 CKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTV 354

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                L+  +     +E D  + A+++ ++M       D   Y   I          EA 
Sbjct: 355 PTYTILIVAM----LKEGD-FDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE 409

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             +    E G +P  +T+  VI A  G G ++ A  +L  M++    PS  +Y  LI  L
Sbjct: 410 DMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469

Query: 451 --DQLEKSYDACAL 462
             ++L K Y   AL
Sbjct: 470 LKEELTKKYKNVAL 483



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 195/402 (48%), Gaps = 5/402 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ + K G   +   + +L+  L  +   +  +  F +       P   T+++++    
Sbjct: 26  VFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALF 85

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA  +   M + G  PN+ T+T+++N++CK  +L+E   +LD+M   G  P++ 
Sbjct: 86  ESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVP 145

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G C  G VE A E+L  + ++   P+  TY  ++ GFC+    + AM LL++ 
Sbjct: 146 TYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKM 205

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +E  +TP+VVT+N+L +G CK G       LL LM +   +PD+ +YS  ++ L K G+I
Sbjct: 206 LESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRI 265

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +F  +   G + +E +  +L+ G C     +   ++DA  + ++M  +  + +  
Sbjct: 266 EEANVLFNSLKEKGIKANEVIYTALIDGYC-----KAGKMDDANSLLDRMLTEDCLPNSS 320

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L K +K  EAL+ +   I+ G      T+  +I A+  EG  D A  +L  M
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQM 380

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                 P    Y   I          +A  +     ++GV+P
Sbjct: 381 VSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMP 422



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 182/392 (46%), Gaps = 15/392 (3%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV  +N L+     +   ++A +  +  +  G+ P+ WT+S+ I   C K    EA  + 
Sbjct: 213 SVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLF 272

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           + + + G   N   +T L++  CK+G++ +A  +LD+M    C PN  TYN L+ GLC  
Sbjct: 273 NSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKE 332

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            +V+EA  ++ ++   GLK  V TYT ++    K G  + A  +L++ +  G  P+V  +
Sbjct: 333 RKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIY 392

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
               + +C  G   +   ++ +M +R  +PD ++Y+ +++     G + PA  + K M  
Sbjct: 393 TAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFD 452

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD--PGTYGIVIRTLG 381
            G +      + L+          K LL++      K  K V++ D  P  +   +  + 
Sbjct: 453 TGCDPSHHTYSCLI----------KHLLKEE---LTKKYKNVALCDSIPNVFFADVADVW 499

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K  K + AL      +E G  P   T+  +I  LC  G++  A  L   M E    PS  
Sbjct: 500 KMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEA 559

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            Y+ L+    +L    DA  L GA ++ G +P
Sbjct: 560 IYNSLLNCCCELGIYGDAVRLVGAMMEHGHLP 591



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 158/340 (46%), Gaps = 12/340 (3%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S      +D + K   ++E + + +S+ + G   +V  +  L++A++   + + A + 
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRI 376

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             +  S G  P+ + ++  I  +C + +  EA  ++  MF+ G  P+  T+T+++++   
Sbjct: 377 LDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGG 436

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G L  A +VL +M   GC P+  TY+CL+K L      EE  +   NV      P+V+ 
Sbjct: 437 LGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL----LKEELTKKYKNVALCDSIPNVF- 491

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           +  V D + K+ +   A+EL  + +E G +PN+ T+  L  G CK G       L   M 
Sbjct: 492 FADVADVW-KMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMN 550

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +R   P +  Y++LLN   + G    AV +   M+  G       +N L  GL  +  +E
Sbjct: 551 ERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKE 610

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           K     A  VF  + +     D   + I+I  L K   +D
Sbjct: 611 K-----AKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSD 645



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/177 (18%), Positives = 83/177 (46%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           D  K    +  +++F+ + + G + +++ +  L++ L  +     A K F   +  G++P
Sbjct: 497 DVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSP 556

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           +   ++ ++ C C    + +A +++  M ++G+ P + +  +L   L + G  ++A  V 
Sbjct: 557 SEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVF 616

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
             + + G   +   +  L+ GL   G  +   E+L  ++  G +    TY  +++G 
Sbjct: 617 SNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 203/403 (50%), Gaps = 27/403 (6%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  FN L+      ++   A+  F + +  G  P   TF+ ++   C ++   EA     
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD--- 71

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +F     PNV TFT L+N LC+ GR+ EA+ +LD+M   G +PN  TY  ++ G+C +G
Sbjct: 72  -LFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 205 RVEEAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
               A  +L  ++    +KPDV  Y+A++DG  K GR  +A  L  E  ++G+ P++VT+
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           + + NG+C  G   +   LL+ M  R   PD +++S L+N L+K G +  A  + +EM+ 
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG-----------T 372
            G   +    N+LL GLC     +   L+DA ++F+ M K +   D             T
Sbjct: 251 SGVCPNVVTCNTLLDGLC-----DSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQT 305

Query: 373 YGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
           Y I+I  L   GK  + +E    + H    G +P T+T++++I  LC + ++D+A  +  
Sbjct: 306 YNILISGLINEGKFLEAEELYEEMPHR---GIVPDTVTYSSMINGLCKQSRLDEATQMFD 362

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            M   +  P+  +++ LIT   +     D   L+    ++G++
Sbjct: 363 SMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIV 405



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 201/422 (47%), Gaps = 21/422 (4%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L   +  F  + K G + ++  FN LL  L + +    A+  F +       PN  TF
Sbjct: 29  SKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTF 84

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + ++   C +    EA  ++D M ++G  PN  T+  +V+ +CK G    AL +L +M  
Sbjct: 85  TTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 144

Query: 184 IG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           +   KP++  Y+ ++ GL   GR  +A  + + +++ G+ PD+ TY+ +++GFC  G+ +
Sbjct: 145 LSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWS 204

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA  LL E + R ++P+VVTF+ L N   KEG       LL+ M      P+ ++ +TLL
Sbjct: 205 EAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLL 264

Query: 303 NGLLKWGKIRPAVSIFKEMVRF-----------GFEVDERMMNSLLRGLCMKSWEEKDLL 351
           +GL   GK++ A+ +FK M +            G E D +  N L+ GL      E   L
Sbjct: 265 DGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI----NEGKFL 320

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           E A +++E+M  +  V D  TY  +I  L K  + DEA             P  +TFN +
Sbjct: 321 E-AEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTL 379

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I   C  G +D  L L   M     + +  +Y  LI    ++     +  ++   +  GV
Sbjct: 380 ITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439

Query: 472 IP 473
            P
Sbjct: 440 YP 441



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 155/306 (50%), Gaps = 31/306 (10%)

Query: 72  IFDSIKKDGTNWSVSD----------FNDLLMALVMLN------EQETAVKFFSEASSYG 115
           I D + KDG +    +          F D++    M+N      +   A +   E     
Sbjct: 158 IIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRK 217

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           ++P+  TFS +I     + D   A+ ++  M  +G  PNV T   L++ LC SG+LK+AL
Sbjct: 218 ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDAL 277

Query: 176 EVLDQMGRI-----------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           E+   M +            G +P++QTYN L+ GL   G+  EA E+   + + G+ PD
Sbjct: 278 EMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 337

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
             TY+++++G CK  R +EA ++ +    +  +PN+VTFNTL  GYCK G    G+ L  
Sbjct: 338 TVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFC 397

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            M +R  + + I+Y TL+ G  K G I  ++ IF+EM+  G   D   + ++L GL    
Sbjct: 398 EMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL---- 453

Query: 345 WEEKDL 350
           W +++L
Sbjct: 454 WSKEEL 459



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 166/333 (49%), Gaps = 23/333 (6%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           ++ +F IL+   C   +L  AL    ++ ++G  P + T+N LL GLC   RV EA ++ 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +     KP+V T+T +M+G C+ GR  EA+ LL+  +E G+ PN +T+ T+ +G CK 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 274 GTPMKGVGLLKLMKKRNCL-PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
           G  +  + LL+ M++ + + PD + YS +++GL K G+   A ++F EM   G   D   
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 333 MNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
            + ++ G C    W E   L     + E + +K+S  D  T+  +I  L K    + A  
Sbjct: 190 YSCMINGFCSSGKWSEAQRL-----LQEMLVRKIS-PDVVTFSGLINALVKEGDLNSAQD 243

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE--------HA---KIPSR 440
            L   I  G  P  +T N ++  LC  GK+  AL +   M +        HA     P  
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +Y++LI+ L    K  +A  LY     +G++P
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 123/248 (49%), Gaps = 11/248 (4%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  F+ L+ ALV   +  +A     E  S G+ PN  T + ++   C+     +A ++  
Sbjct: 222 VVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFK 281

Query: 145 CMFD-----------NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
            M             NG  P+V T+ IL++ L   G+  EA E+ ++M   G  P+  TY
Sbjct: 282 AMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTY 341

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           + ++ GLC   R++EA +M  ++ +    P++ T+  ++ G+CK G  ++ +EL  E   
Sbjct: 342 SSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGR 401

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RG+  N +T+ TL  G+ K G     + + + M      PD I+   +L GL    +++ 
Sbjct: 402 RGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 461

Query: 314 AVSIFKEM 321
           A+++ +E+
Sbjct: 462 ALAMLEEL 469



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 100/214 (46%), Gaps = 12/214 (5%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKK-----------DGTNWSVSDFNDLLMALV 96
           P  +     +D +  +  LK+ +++F +++K           +G    V  +N L+  L+
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI 314

Query: 97  MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
              +   A + + E    G+ P++ T+S MI   C ++   EA ++ D M    + PN+ 
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           TF  L+   CK+G + + LE+  +MGR G   N  TY  L++G   VG +  + ++   +
Sbjct: 375 TFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEM 434

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            + G+ PD  T   ++ G         A+ +L E
Sbjct: 435 ISSGVYPDTITIRNMLTGLWSKEELKRALAMLEE 468



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 53/120 (44%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S L E   +FDS+     + ++  FN L+         +  ++ F E    G+  N+ 
Sbjct: 350 KQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAI 409

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +IR +    +   +  +   M  +G +P+  T   ++  L     LK AL +L+++
Sbjct: 410 TYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 203/403 (50%), Gaps = 27/403 (6%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  FN L+      ++   A+  F + +  G  P   TF+ ++   C ++   EA     
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD--- 71

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +F     PNV TFT L+N LC+ GR+ EA+ +LD+M   G +PN  TY  ++ G+C +G
Sbjct: 72  -LFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 205 RVEEAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
               A  +L  ++    +KPDV  Y+A++DG  K GR  +A  L  E  ++G+ P++VT+
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           + + NG+C  G   +   LL+ M  R   PD +++S L+N L+K G +  A  + +EM+ 
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG-----------T 372
            G   +    N+LL GLC     +   L+DA ++F+ M K +   D             T
Sbjct: 251 SGVCPNVVTCNTLLDGLC-----DSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQT 305

Query: 373 YGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
           Y I+I  L   GK  + +E    + H    G +P T+T++++I  LC + ++D+A  +  
Sbjct: 306 YNILISGLINEGKFLEAEELYEEMPHR---GIVPDTVTYSSMINGLCKQSRLDEATQMFD 362

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            M   +  P+  +++ LIT   +     D   L+    ++G++
Sbjct: 363 SMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIV 405



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 201/422 (47%), Gaps = 21/422 (4%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L   +  F  + K G + ++  FN LL  L + +    A+  F +       PN  TF
Sbjct: 29  SKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTF 84

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + ++   C +    EA  ++D M ++G  PN  T+  +V+ +CK G    AL +L +M  
Sbjct: 85  TTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 144

Query: 184 IG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           +   KP++  Y+ ++ GL   GR  +A  + + +++ G+ PD+ TY+ +++GFC  G+ +
Sbjct: 145 LSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWS 204

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA  LL E + R ++P+VVTF+ L N   KEG       LL+ M      P+ ++ +TLL
Sbjct: 205 EAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLL 264

Query: 303 NGLLKWGKIRPAVSIFKEMVRF-----------GFEVDERMMNSLLRGLCMKSWEEKDLL 351
           +GL   GK++ A+ +FK M +            G E D +  N L+ GL      E   L
Sbjct: 265 DGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI----NEGKFL 320

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           E A +++E+M  +  V D  TY  +I  L K  + DEA             P  +TFN +
Sbjct: 321 E-AEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTL 379

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I   C  G +D  L L   M     + +  +Y  LI    ++     +  ++   +  GV
Sbjct: 380 ITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGV 439

Query: 472 IP 473
            P
Sbjct: 440 YP 441



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 155/306 (50%), Gaps = 31/306 (10%)

Query: 72  IFDSIKKDGTNWSVSD----------FNDLLMALVMLN------EQETAVKFFSEASSYG 115
           I D + KDG +    +          F D++    M+N      +   A +   E     
Sbjct: 158 IIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRK 217

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           ++P+  TFS +I     + D   A+ ++  M  +G  PNV T   L++ LC SG+LK+AL
Sbjct: 218 ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDAL 277

Query: 176 EVLDQMGRI-----------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           E+   M +            G +P++QTYN L+ GL   G+  EA E+   + + G+ PD
Sbjct: 278 EMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 337

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
             TY+++++G CK  R +EA ++ +    +  +PN+VTFNTL  GYCK G    G+ L  
Sbjct: 338 TVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFC 397

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            M +R  + + I+Y TL+ G  K G I  ++ IF+EM+  G   D   + ++L GL    
Sbjct: 398 EMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL---- 453

Query: 345 WEEKDL 350
           W +++L
Sbjct: 454 WSKEEL 459



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 166/333 (49%), Gaps = 23/333 (6%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           ++ +F IL+   C   +L  AL    ++ ++G  P + T+N LL GLC   RV EA ++ 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +     KP+V T+T +M+G C+ GR  EA+ LL+  +E G+ PN +T+ T+ +G CK 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 274 GTPMKGVGLLKLMKKRNCL-PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
           G  +  + LL+ M++ + + PD + YS +++GL K G+   A ++F EM   G   D   
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 333 MNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
            + ++ G C    W E   L     + E + +K+S  D  T+  +I  L K    + A  
Sbjct: 190 YSCMINGFCSSGKWSEAQRL-----LQEMLVRKIS-PDVVTFSGLINALVKEGDLNSAQD 243

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE--------HA---KIPSR 440
            L   I  G  P  +T N ++  LC  GK+  AL +   M +        HA     P  
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +Y++LI+ L    K  +A  LY     +G++P
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 123/248 (49%), Gaps = 11/248 (4%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  F+ L+ ALV   +  +A     E  S G+ PN  T + ++   C+     +A ++  
Sbjct: 222 VVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFK 281

Query: 145 CMFD-----------NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
            M             NG  P+V T+ IL++ L   G+  EA E+ ++M   G  P+  TY
Sbjct: 282 AMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTY 341

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           + ++ GLC   R++EA +M  ++ +    P++ T+  ++ G+CK G  ++ +EL  E   
Sbjct: 342 SSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGR 401

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RG+  N +T+ TL  G+ K G     + + + M      PD I+   +L GL    +++ 
Sbjct: 402 RGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKK 461

Query: 314 AVSIFKEM 321
           A+++ +E+
Sbjct: 462 ALAMLEEL 469



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 12/214 (5%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKK-----------DGTNWSVSDFNDLLMALV 96
           P  +     +D +  +  LK+ +++F +++K           +G    V  +N L+  L+
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI 314

Query: 97  MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
              +   A + + E    G+ P++ T+S MI   C ++   EA ++ D M    + PN+ 
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           TF  L+   CK+G + + LE+  +MGR G   N  TY  L++G   VG +  + ++   +
Sbjct: 375 TFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEM 434

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            + G+ PD  T   ++ G        +A+ +L E
Sbjct: 435 ISSGVYPDTITIRNMLTGLWSKEELKKALAMLEE 468



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 54/120 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S L E   +FDS+     + ++  FN L+         +  ++ F E    G+  N+ 
Sbjct: 350 KQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAI 409

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +IR +    +   +  +   M  +G +P+  T   ++  L     LK+AL +L+++
Sbjct: 410 TYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 210/420 (50%), Gaps = 11/420 (2%)

Query: 62  KASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSE---ASSYGLA 117
           KA   ++ +D+FD +  +     +   FN +L  ++       A++F++    A    ++
Sbjct: 137 KAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSIS 196

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN  TF+++I+  C      +A +V   M      P+V T+  L++ LCK+ R+ EA+ +
Sbjct: 197 PNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSL 256

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           LD+M   GC P+  T+N L+ GLC  G +  A +++ N+   G  P+  TY  ++ G C 
Sbjct: 257 LDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCL 316

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G+  +A+ LL+  +     PNVVT+ T+ NG  K+G  + G  +L LM++R    ++  
Sbjct: 317 KGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYV 376

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           YSTL++GL K GK + A+ +FKEM   G+E++  + ++++ GLC          +DA +V
Sbjct: 377 YSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKP-----DDAVEV 431

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
             +MT K    +  T   +++   +   +  A+       +       + ++ +I  LC 
Sbjct: 432 LSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCK 491

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
           +GK+ +A+++   M      P   +Y  +I  L       DA  LY   L QG  P  +P
Sbjct: 492 DGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQG--PDSQP 549



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 186/396 (46%), Gaps = 11/396 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + I +F  +        V  +  L+  L   +  + AV    E    G  P+  
Sbjct: 211 KVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPV 270

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+++I   C K D   A K++D MF  G  PN  T+  L++ LC  G+L++A+ +LD+M
Sbjct: 271 TFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRM 330

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C PN+ TY  ++ GL   GR  +   +L  ++  G   + Y Y+ ++ G  K G+S
Sbjct: 331 VSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKS 390

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EAM L  E   +G   N + ++ + +G C++G P   V +L  M  + C P+  + S+L
Sbjct: 391 QEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSL 450

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G  + G    AV ++K+M +  F  +E   + L+ GLC     +   +++A  V+ +M
Sbjct: 451 MKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLC-----KDGKVKEAMMVWTQM 505

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG--HIPRTITFNNVIQALCGEG 419
             K    D   Y  +I  L      ++A+   +  +  G    P  +T+N ++  LC + 
Sbjct: 506 LGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQS 565

Query: 420 KIDKALLLLFLMYEHAKIPSRTS----YDMLITKLD 451
            I +A+ LL  M +    P   +      ML  KLD
Sbjct: 566 SISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLD 601



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 172/383 (44%), Gaps = 48/383 (12%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCM------------------FDNGYHPNVT------- 156
           TF  +I  Y N  DF    KV+D M                  +   + P          
Sbjct: 92  TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRM 151

Query: 157 -----------TFTILVNSLCKSGRLKEALEVLDQMGRIGCK-----PNIQTYNCLLKGL 200
                      +F  ++N + + G    ALE  + +  IG K     PN+ T+N ++K +
Sbjct: 152 ACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHV--IGAKGVSISPNVLTFNLVIKAM 209

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C VG V++A ++  ++     +PDVYTY  +MDG CK  R +EA+ LL+E    G  P+ 
Sbjct: 210 CKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSP 269

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           VTFN L NG CK+G   +   L+  M  + C+P++++Y+TL++GL   GK+  A+S+   
Sbjct: 270 VTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDR 329

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           MV       + + N +  G  +    ++    D   V   M ++    +   Y  +I  L
Sbjct: 330 MVS-----SKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGL 384

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K  K+ EA+         G+   TI ++ VI  LC +GK D A+ +L  M      P+ 
Sbjct: 385 FKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNA 444

Query: 441 TSYDMLITKLDQLEKSYDACALY 463
            +   L+    +   S+ A  ++
Sbjct: 445 YTCSSLMKGFFEAGNSHRAVEVW 467



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 141/305 (46%), Gaps = 21/305 (6%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L    + + A+  F E +  G   N+  +S +I   C      +A +V+  M 
Sbjct: 377 YSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMT 436

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  PN  T + L+    ++G    A+EV   M +     N   Y+ L+ GLC  G+V+
Sbjct: 437 NKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 496

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG--VTPNVVTFNT 265
           EA  +   +   G KPDV  Y+++++G    G   +AM+L NE + +G    P+VVT+N 
Sbjct: 497 EAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNI 556

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L N  CK+ +  + + LL  M  R C PD ++ +  L  L +  K+ P         + G
Sbjct: 557 LLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLRE--KLDPP--------QDG 606

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            E  + ++  LL+         +  +  A ++ E M +K+      T+  V+  L K KK
Sbjct: 607 REFLDELVVRLLK---------RQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKK 657

Query: 386 TDEAL 390
               +
Sbjct: 658 VQAVI 662



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 149/363 (41%), Gaps = 46/363 (12%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMG---------------------------- 182
           Y    +TF  L+N+    G  K   +VLD+M                             
Sbjct: 86  YRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAV 145

Query: 183 --------RIGCKPNIQTYNCLLKGLCYVG---RVEEAYEMLMNVKNDGLKPDVYTYTAV 231
                      CK   +++N +L  +   G   R  E Y  ++  K   + P+V T+  V
Sbjct: 146 DLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLV 205

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           +   CKVG  ++A+++  +   R   P+V T+ TL +G CK     + V LL  M+   C
Sbjct: 206 IKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGC 265

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P  ++++ L+NGL K G +  A  +   M   G   +E   N+L+ GLC+K       L
Sbjct: 266 FPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGK-----L 320

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK-GKKTDEALIHLHHAIEMGHIPRTITFNN 410
           E A  + ++M     V +  TYG +I  L K G+  D A + L    E G+      ++ 
Sbjct: 321 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACV-LALMEERGYCVNEYVYST 379

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I  L  EGK  +A+ L   M       +   Y  +I  L +  K  DA  +      +G
Sbjct: 380 LISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKG 439

Query: 471 VIP 473
             P
Sbjct: 440 CTP 442


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 198/428 (46%), Gaps = 19/428 (4%)

Query: 31  VFAAASLSTAESLDLKEN---PRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSD 87
            F  ASL++  SL  +     P +L   + V R  +SP +    + DS+        +S 
Sbjct: 75  AFTPASLASLHSLAARHRIPPPSALLLSKLVRRF-SSPAEAAGFLRDSLASGAPAPDISI 133

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN LL AL          + F+      + P+  T+ I++   C      +A KV+D M 
Sbjct: 134 FNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMS 193

Query: 148 DNGYH--PNVTTFTILVNSLCKSGRLKEALEVLDQMGRI--GCKPNIQTYNCLLKGLCYV 203
             G    P++     +V+ LCK GRL++A+  +D+  R   GC PN  TYNCL    C V
Sbjct: 194 SPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRV 253

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP----N 259
           G +  A +++  ++ +G+ P+V T   ++ G C+VGR   A+E   E  +R V P    N
Sbjct: 254 GDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFRE--KRTVWPEARGN 311

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VT++TL + +         + L   M      PD + Y T+++GL + G++  A +   
Sbjct: 312 AVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAA 371

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            M + GF++D +  N L+ G C      K  L +AY++ E+M       D  TY  ++  
Sbjct: 372 SMKKAGFKLDAKAYNILIGGFC-----RKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSG 426

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           L K          L H I+ G  P  +TF  ++   C  GK D+AL +   M E    P+
Sbjct: 427 LCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPN 486

Query: 440 RTSYDMLI 447
              Y+ LI
Sbjct: 487 TVIYNTLI 494



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 157/295 (53%), Gaps = 7/295 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY--GLAPNSWTFSIMIRC 129
           I   ++K+G   +V   N ++  L  +     A++FF E  +       N+ T+S +   
Sbjct: 262 IVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASA 321

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           + + N+   A ++   M D+G+ P+   +  +++ L ++GRL +A      M + G K +
Sbjct: 322 FLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLD 381

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
            + YN L+ G C   ++ EAYE+L  +K  GL+PDVYTY  ++ G CK G  +   ELL 
Sbjct: 382 AKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLG 441

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             I+ G  P+VVTF TL +GYCK G   + + + + M +    P+ + Y+TL++ L K  
Sbjct: 442 HMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSR 501

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           ++  A+ +F EM       +    N+LL+GL     ++K + E A+++ ++M ++
Sbjct: 502 EVDVAIKLFDEMREKNVPANVTTYNALLKGL-----QDKKMAEKAFELMDRMREE 551



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 91/193 (47%)

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           S+KK G       +N L+       +   A +   E    GL P+ +T++ ++   C   
Sbjct: 372 SMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAG 431

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
           DF    +++  M D+G  P+V TF  LV+  CK+G+  EAL +   M     +PN   YN
Sbjct: 432 DFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYN 491

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+  LC    V+ A ++   ++   +  +V TY A++ G      + +A EL++   E 
Sbjct: 492 TLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREE 551

Query: 255 GVTPNVVTFNTLF 267
             TPN VT + L 
Sbjct: 552 RCTPNYVTVDVLM 564


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 193/408 (47%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K  + +F    + G  W+ + +N +  +L  L     A +   +    G  P+  ++S 
Sbjct: 234 IKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYST 293

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC   +     K+I+ M   G  PN  T+  ++  LCK+G++ EA  VL +M   G
Sbjct: 294 VINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG 353

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+   Y  L+ G C +G V  AY +   ++   + PD  TYTAV+ G C+ GR  EA 
Sbjct: 354 IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEAD 413

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L +E + + + P+ VT+  L +GYCKEG   +   L   M +    P+ ++Y+ L +GL
Sbjct: 414 KLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGL 473

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G++  A  +  EM R G E++    NSL+ GLC     +   ++ A ++ + M    
Sbjct: 474 CKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLC-----KAGNIDQAVKLMKDMEVAG 528

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY  ++    K ++   A   L   ++    P  +TFN ++   C  G ++   
Sbjct: 529 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 588

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            LL  M E   +P+ T+Y+ LI +            +Y     +GV+P
Sbjct: 589 KLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 636



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 157/318 (49%), Gaps = 5/318 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD ++K   +     +  ++  L        A K F E     L P+  T++ +I  YC
Sbjct: 380 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 439

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    EA  + + M   G  PN+ T+T L + LCK G +  A E+L +M R G + NI 
Sbjct: 440 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 499

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ GLC  G +++A +++ +++  G  PD  TYT +MD +CK      A ELL + 
Sbjct: 500 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 559

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           ++R + P VVTFN L NG+C  G    G  LLK M ++  +P+  +Y++L+        +
Sbjct: 560 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 619

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           R    I++ M   G   D    N L++G C     +   +++A+ +   M  K       
Sbjct: 620 RATTEIYRGMCAKGVVPDGNTYNILIKGHC-----KARNMKEAWFLHRDMVGKGFNLTVS 674

Query: 372 TYGIVIRTLGKGKKTDEA 389
           +Y  +I+   K KK  EA
Sbjct: 675 SYNALIKGFYKRKKFLEA 692



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 127/273 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE   + + + + G   ++  +  L   L    E +TA +   E    GL  N +
Sbjct: 440 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 499

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C   +  +A K++  M   G+HP+  T+T L+++ CKS  +  A E+L QM
Sbjct: 500 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 559

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                +P + T+N L+ G C  G +E+  ++L  +   G+ P+  TY +++  +C     
Sbjct: 560 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 619

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
               E+      +GV P+  T+N L  G+CK     +   L + M  +       SY+ L
Sbjct: 620 RATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNAL 679

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
           + G  K  K   A  +F++M R G   D  + N
Sbjct: 680 IKGFYKRKKFLEARELFEQMRREGLVADREIYN 712



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 113/252 (44%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   + + G   ++  +N L+  L      + AVK   +    G  P++ T++ ++  Y
Sbjct: 484 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 543

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +   A +++  M D    P V TF +L+N  C SG L++  ++L  M   G  PN 
Sbjct: 544 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 603

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L+K  C    +    E+   +   G+ PD  TY  ++ G CK     EA  L  +
Sbjct: 604 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 663

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + +G    V ++N L  G+ K    ++   L + M++   + D+  Y+   +     GK
Sbjct: 664 MVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGK 723

Query: 311 IRPAVSIFKEMV 322
           +   + +  E +
Sbjct: 724 MELTLELCDEAI 735



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 84/182 (46%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  FN L+    M    E   K        G+ PN+ T++ +I+ YC +N+     ++ 
Sbjct: 567 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY 626

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G  P+  T+ IL+   CK+  +KEA  +   M   G    + +YN L+KG    
Sbjct: 627 RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 686

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            +  EA E+   ++ +GL  D   Y    D     G+    +EL +EAIE+ +  ++ T 
Sbjct: 687 KKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTK 746

Query: 264 NT 265
           NT
Sbjct: 747 NT 748


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/541 (25%), Positives = 225/541 (41%), Gaps = 96/541 (17%)

Query: 21  NKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLK--ERIDIFDSIKK 78
           N +P  + +     +SL T  S     NP   Q   F+   K   +     +  F  + +
Sbjct: 6   NTVPSASSIRNSNLSSLFTHSSAIPSPNP---QIAFFLRHCKTGNVTATHALHFFHLMMR 62

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
                S+S FN LL  L  +         +++    GL+ +  T +I++ C CN N   E
Sbjct: 63  STPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLRE 122

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
                  +   GY PN+ T+  L+  LC   R+ EA  +  +M ++GC P++ TY  L+K
Sbjct: 123 GFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIK 182

Query: 199 GLCYVGRVEEAYEMLMNVKND------GLKPDVYTYTAVMDGFCKVGRSNEAMELL---- 248
           GLC  G +  A ++   + ND        KP+V TY  ++DG CKVGR +EA +L     
Sbjct: 183 GLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMK 242

Query: 249 ------NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL----------------- 285
                 NE +++G+ P++VTFN L +  CKEG  ++   LL +                 
Sbjct: 243 TQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLI 302

Query: 286 ------------------MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
                             M  + C PD ISY+ L+NG  K  K+  A+ ++ EM+  G  
Sbjct: 303 EGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKR 362

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +    +SLL+G+ +        ++DA ++F  M       +  TYGI +  L K     
Sbjct: 363 PNVITYDSLLKGIFLAGK-----VDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF 417

Query: 388 EALI----------------------------HLHHAIEM-------GHIPRTITFNNVI 412
           EA+                              L  A E+       GH P  +T+  +I
Sbjct: 418 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 477

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
              C EG++DKA +L+  M  +   P   +Y+ L+    +  K  +   L     ++ V 
Sbjct: 478 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 537

Query: 473 P 473
           P
Sbjct: 538 P 538



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 201/411 (48%), Gaps = 22/411 (5%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA----SSYGL--APN 119
           + E   +F  ++K G    V  +  L+  L        A+K   E     S Y +   PN
Sbjct: 155 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCM----------FDNGYHPNVTTFTILVNSLCKSG 169
             T++I++   C      EA+++ + M           D G  P++ TF +L+++LCK G
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG 274

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           ++ EA ++L  M   G  P++ TYN L++G C VG +  A E+ +++ + G +PDV +Y 
Sbjct: 275 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 334

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++G+ K  +  EAM+L NE +  G  PNV+T+++L  G    G       L  +MK  
Sbjct: 335 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 394

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
               +  +Y   L+GL K   +  A+ +F E+    F+++   +N L+ GLC     +  
Sbjct: 395 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLC-----KAG 449

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            LE A+++FEK++ +    +  TY I+I    +  + D+A + +      G  P  IT+N
Sbjct: 450 KLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYN 509

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
            +++      K+++ + LL  M +    P   +  +++  L + EK Y  C
Sbjct: 510 TLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEK-YQEC 559



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 166/344 (48%), Gaps = 11/344 (3%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R  +A++  + +K   +     I + +   G    +  FN L+  L    +   A K   
Sbjct: 230 REDEAKQLFEEMKTQGM-----IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG 284

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
                G+ P+  T++ +I  +C   D   AR++   M   G  P+V ++ +L+N   K+ 
Sbjct: 285 VMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTL 344

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +++EA+++ ++M  +G +PN+ TY+ LLKG+   G+V++A ++   +K  G+  + YTY 
Sbjct: 345 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG 404

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
             +DG CK     EAM+L  E         +   N L +G CK G       L + +   
Sbjct: 405 IFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE 464

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P+ ++Y+ +++G  + G++  A  + ++M   G   D    N+L+RG     + E +
Sbjct: 465 GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG-----FYESN 519

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            LE+  Q+  +M +K    D  T  IV+  L K +K  E L HL
Sbjct: 520 KLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECL-HL 562


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 191/388 (49%), Gaps = 6/388 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++     + + + A +   +A   G  P+ +T+  +I   C   D   A  + +   
Sbjct: 296 YNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEAL 355

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P++  +  L+  L + G + +AL++++ M + G  P+I TYN ++ GLC +G V 
Sbjct: 356 GKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVS 415

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +L      G  PD++T+  ++DG+CK  + + A+ +L+     GVTP+V+T+N++ 
Sbjct: 416 DANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSIL 475

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG CK   P   +   K++ ++ CLP+ I+Y+ L+  L K  K+  A+ + +E+   G  
Sbjct: 476 NGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLI 535

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP-GTYGIVIRTLGKGKKT 386
            D     +++ G C         L++AYQ+F +M ++  +     TY I+I    +    
Sbjct: 536 PDPVSFGTVISGFC-----NNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDM 590

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D A    H   + G  P + T+  +I   C  G ++     L    E   +PS T++  +
Sbjct: 591 DMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRV 650

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQ 474
           I  L    + ++A  +    ++ GV+P+
Sbjct: 651 INCLCVQHRVHEAVGIVHLMVRTGVVPE 678



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 209/419 (49%), Gaps = 12/419 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   ++E +D+F+ +       S+  +N ++  LV       A K +      G+AP+  
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVC 147

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I I+ +C       A ++++ M   G   N   +  +++   +     EA E+ ++M
Sbjct: 148 TFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKM 207

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG-- 239
            R+G  P+I T+N L+  LC  G ++E  ++L  V  +G+ P+++T+   + G C+ G  
Sbjct: 208 LRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVL 267

Query: 240 -----RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
                +  EA   L++ + +G+ P+  T+NT+  GY K G       +LK  K +  +PD
Sbjct: 268 EGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPD 327

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
           + +Y +L+ G+ + G I  A+++F+E +  G +    + N+L++GL      ++ L+  A
Sbjct: 328 EFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGL-----SQQGLVLKA 382

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            Q+   M+K+    D  TY +VI  L K     +A   L+ AI  G++P   TFN +I  
Sbjct: 383 LQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDG 442

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            C   K+D A+ +L  M+ H   P   +Y+ ++  L +  K  D    +   +++G +P
Sbjct: 443 YCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLP 501



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 5/230 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I I DS+   G    V  +N +L  L    + E  ++ F      G  PN  T++I+I  
Sbjct: 453 IGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIES 512

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV---LDQMGRIGC 186
            C      EA  +++ + + G  P+  +F  +++  C +G L EA ++   ++Q  RI C
Sbjct: 513 LCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRI-C 571

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
              + TYN ++        ++ A ++   + + G  PD YTY  ++DGFCKVG  N   +
Sbjct: 572 H-TVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYD 630

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
            L + IE G  P++ TF  + N  C +    + VG++ LM +   +P+ +
Sbjct: 631 FLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAV 680


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 190/392 (48%), Gaps = 7/392 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +VS FN LL      ++ E       E  S G+  N  T  +++   C + D  +A    
Sbjct: 127 NVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYF 186

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           + +  N   P + T+T+LV+ LCK+ +++ A +V ++M R G KP+I  Y+ L+ GL   
Sbjct: 187 NSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKA 246

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           GRV+EA +++  +   G  P    YT+++ G CK GR  EA++ + E   R + P V T+
Sbjct: 247 GRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTY 306

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           + +  GY   G   K   +++ M  R+C PD ISY+  +  L   G+   A  +F+ MV 
Sbjct: 307 SFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVE 366

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G + D      ++   C     ++  +  A  V   M K     +   Y +++    K 
Sbjct: 367 KGCKPDMHTYGIIIDNFC-----KEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKS 421

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK--IPSRT 441
            + +EAL      ++ G +P T+T+N VI ALC   K+D+AL LL  M    +   PS  
Sbjct: 422 SRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIV 481

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +Y M+I  L ++     A  L    +  GVIP
Sbjct: 482 TYSMIIHGLGKVGMEERAFDLLAEMIDNGVIP 513



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 195/388 (50%), Gaps = 9/388 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + +  F+S+  +    ++  +  L+  L   ++ E A   F E    G  P+   +S 
Sbjct: 179 LDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSS 238

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I          EARK++D M   G  P    +T +V  LCK GR++EA++ + +M R  
Sbjct: 239 LIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRR 298

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +P + TY+ ++ G   +G+VE+A+ ++  + +    PD  +YT  ++    +GR  EA 
Sbjct: 299 LRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAE 358

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++    +E+G  P++ T+  + + +CKEG+      +L+LM K    P++  Y+ +++G 
Sbjct: 359 KVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGF 418

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKK 364
           +K  ++  A+ +++ +++ G        N+++  LC +K  +E      A ++  +M ++
Sbjct: 419 VKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDE------ALELLREMQRR 472

Query: 365 VSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
               +P   TY ++I  LGK    + A   L   I+ G IP   T+ ++IQ L G GK+ 
Sbjct: 473 KEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVS 532

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +A+ LL  M +    P   +Y  L+  L
Sbjct: 533 RAMELLEEMLKAGIFPDDHTYGTLVQIL 560



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 117/259 (45%), Gaps = 37/259 (14%)

Query: 49  PRSLQAQRFVDRIKASPLKERID-IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++    F++ + +   +E  + +F+++ + G    +  +  ++           A   
Sbjct: 336 PDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHV 395

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
                   + PN + +++++  +   +   EA ++   +  +G  P+  T+  ++N+LCK
Sbjct: 396 LRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCK 455

Query: 168 SGRLKEALEVLDQMGRIG--CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
             ++ EALE+L +M R     +P+I TY+ ++ GL  VG  E A+++L  + ++G+ PD 
Sbjct: 456 LKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDC 515

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGV----------------------------- 256
           +TYT+++      G+ + AMELL E ++ G+                             
Sbjct: 516 FTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSDVDAAWDLLQEM 575

Query: 257 -----TPNVVTFNTLFNGY 270
                TPN  TF  +  G+
Sbjct: 576 MRNGHTPNEFTFKAVEKGF 594


>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
 gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
          Length = 491

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 205/400 (51%), Gaps = 16/400 (4%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFF---SEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
            W+    N +L  L   N+   A++FF   S   SY   P+S+  +I I       D   
Sbjct: 64  QWTPQLVNTILKRL--WNDGPKALQFFNLLSHHPSYSHHPSSYDHAIDISARLR--DSPS 119

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
            R ++  M      P   TF I+      +G+   A++V   M + GC  ++Q++N +L 
Sbjct: 120 LRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILD 179

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
            LC   RVE AY  L  V     + D  +Y  +++G+C + R+N+A+E+L E ++RG+TP
Sbjct: 180 VLCKSKRVEMAYN-LFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTP 238

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           N+ ++NT+  GY + G   +       MKKR+C  D I+Y+T+++G    G+I+ A  +F
Sbjct: 239 NLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVF 298

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
             MV+ G        N+ ++ LC     +KD +++A  +FE+M  K  V +  TY +VIR
Sbjct: 299 DTMVKKGVLPSVATYNAFIQVLC-----KKDNVDNAIVIFEEMVVKGYVPNSITYNLVIR 353

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L    + + A+  +    + G  P   T+N VI+  C EG+IDKAL L   M     +P
Sbjct: 354 GLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLP 413

Query: 439 SRTSYDMLITKLDQLEKSYD---ACALYGAALKQGVIPQR 475
           +  +Y++LI+ +   +KS D   A  L    + +G +P++
Sbjct: 414 NLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRK 453



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 160/319 (50%), Gaps = 9/319 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           AVK F     +G   +  +F+ ++   C K+   E    +  +F   +  +  ++ ++VN
Sbjct: 155 AVKVFLSMHQFGCFQDLQSFNTILDVLC-KSKRVEMAYNLFKVFKGKFRADCVSYNVMVN 213

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             C   R  +ALE+L +M + G  PN+ +YN +LKG    G++ EA++  + +K    + 
Sbjct: 214 GWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEI 273

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV TYT V+ GF   G    A ++ +  +++GV P+V T+N      CK+      + + 
Sbjct: 274 DVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIF 333

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           + M  +  +P+ I+Y+ ++ GL   G++  A+     M   G E + +  N ++R  C  
Sbjct: 334 EEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFC-- 391

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM---G 400
              ++  ++ A  +F+KMT    + +  TY I+I  +   KK+D+ L+  +  IEM   G
Sbjct: 392 ---DEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRG 448

Query: 401 HIPRTITFNNVIQALCGEG 419
            +PR  TFN V+  L   G
Sbjct: 449 FVPRKFTFNRVLNGLLLTG 467



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 3/259 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++   + K G   +++ +N +L       +   A  FF E        +  T++ +I  
Sbjct: 225 LEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHG 284

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +    +   ARKV D M   G  P+V T+   +  LCK   +  A+ + ++M   G  PN
Sbjct: 285 FGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPN 344

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN +++GLC+ G +E A E +  +K+DG +P+V TY  V+  FC  G  ++A++L  
Sbjct: 345 SITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQ 404

Query: 250 EAIERGVTPNVVTFNTLFNGYC---KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           +       PN+ T+N L +      K    +    LL  M  R  +P K +++ +LNGLL
Sbjct: 405 KMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLL 464

Query: 307 KWGKIRPAVSIFKEMVRFG 325
             G    A  I +   R G
Sbjct: 465 LTGNQGFAKEILRLQSRCG 483



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 3/238 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E  D F  +KK      V  +  ++    +  E + A K F      G+ P+  
Sbjct: 252 RAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVA 311

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++  I+  C K++   A  + + M   GY PN  T+ +++  LC  G ++ A+E + +M
Sbjct: 312 TYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRM 371

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC+PN+QTYN +++  C  G +++A ++   + +    P++ TY  ++       +S
Sbjct: 372 KDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKS 431

Query: 242 NE---AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           ++   A  LL E ++RG  P   TFN + NG    G       +L+L  +   L  KI
Sbjct: 432 DDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQGFAKEILRLQSRCGRLTRKI 489


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 180/342 (52%), Gaps = 6/342 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + K   + +  D++  +   G + +V  ++ L+     + + + A+  
Sbjct: 195 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDL 254

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F++     + P+ +TF+I++  +C      E + V   M   G  PNV T+  L++  C 
Sbjct: 255 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 314

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              + +A  +L  M + G  P+IQ+YN L+ G C + +V+EA  +   + +  + PDV T
Sbjct: 315 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT 374

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y +++DG CK+G+ + A++L++E  +RGV P+++T++++ +  CK     K + LL  +K
Sbjct: 375 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 434

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            +   P+  +Y+ L++GL K G++  A +IF++++  G+ +       ++ G C      
Sbjct: 435 DQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFC-----N 489

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
           K L ++A  +  KM     + D  TY I+IR+L    + D+A
Sbjct: 490 KGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKA 531



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 165/321 (51%), Gaps = 5/321 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   +SE  S G++PN  T+S +I  +       +A  + + M      P+V TF ILV+
Sbjct: 216 AFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVD 275

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             CK G++KE   V   M + G KPN+ TY  L+ G C V  V +A  +L  +   G+ P
Sbjct: 276 GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNP 335

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D+ +Y  ++DGFCK+ + +EAM L  E   + + P+VVT+N+L +G CK G     + L+
Sbjct: 336 DIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLV 395

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M  R   PD I+YS++L+ L K  ++  A+++  ++   G   +      L+ GLC  
Sbjct: 396 DEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLC-- 453

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   LEDA+ +FE +  K       TY ++I         DEAL  L    +   IP
Sbjct: 454 ---KGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIP 510

Query: 404 RTITFNNVIQALCGEGKIDKA 424
             +T+  +I++L  + + DKA
Sbjct: 511 DAVTYEIIIRSLFDKDENDKA 531



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 198/413 (47%), Gaps = 14/413 (3%)

Query: 47  ENPRSLQAQR-----FVDRIKASPLKERID----IFDSIKKDGTNWSVSDFNDLLMALVM 97
           ++P  L         F   IK   LK +I       D++   G       +  L+  L  
Sbjct: 115 QHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCK 174

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           + E   A+          + PN   +S +I   C      +A  +   M   G  PNV T
Sbjct: 175 VGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 234

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           ++ L++     G+LK+A+++ ++M     KP++ T+N L+ G C  G+++E   +   + 
Sbjct: 235 YSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMM 294

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G+KP+V TY ++MDG+C V   N+A  +L    +RGV P++ ++N L +G+CK     
Sbjct: 295 KQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVD 354

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           + + L K M  ++ +PD ++Y++L++GL K GKI  A+ +  EM   G   D    +S+L
Sbjct: 355 EAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSIL 414

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
             LC     +K     A  +  K+  +    +  TY I+I  L KG + ++A       +
Sbjct: 415 DALCKNHQVDK-----AIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL 469

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             G+     T+  +I   C +G  D+AL LL  M +++ IP   +Y+++I  L
Sbjct: 470 VKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 188/357 (52%), Gaps = 7/357 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN+ TF+ +I+  C K    +A    D +   G+  +   +  L++ LCK G  + A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L++L ++     +PN+  Y+ ++ G+C    V +A+++   + + G+ P+V TY+A++ G
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           F  VG+  +A++L N+ I   + P+V TFN L +G+CK+G   +G  +  +M K+   P+
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 301

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLED 353
            ++Y +L++G     ++  A SI   M + G   D +  N L+ G C +K  +E      
Sbjct: 302 VVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDE------ 355

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A  +F++M  K  + D  TY  +I  L K  K   AL  +    + G  P  IT+++++ 
Sbjct: 356 AMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILD 415

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           ALC   ++DKA+ LL  + +    P+  +Y +LI  L +  +  DA  ++   L +G
Sbjct: 416 ALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 472



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 176/407 (43%), Gaps = 58/407 (14%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N   +S +   + N ND  +A  +   +      P    F  ++ SL KS      L + 
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 179 DQM----------------GRIGCKPNIQTYNCLLKGLCYVGRVEE-------------- 208
            QM                  +G  PN  T+  L+KGLC  G++ +              
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 209 ---------------------AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
                                A ++L  V  + ++P+V  Y+ ++DG CK    N+A +L
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E + +G++PNVVT++ L +G+   G     + L   M   N  PD  +++ L++G  K
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK++   ++F  M++ G + +     SL+ G C+     K     A  +   M+++   
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNK-----AKSILYTMSQRGVN 334

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH-IPRTITFNNVIQALCGEGKIDKALL 426
            D  +Y I+I    K KK DEA+ +L   +   H IP  +T+N++I  LC  GKI  AL 
Sbjct: 335 PDIQSYNILIDGFCKIKKVDEAM-NLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALK 393

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L+  M++    P   +Y  ++  L +  +   A AL      QG+ P
Sbjct: 394 LVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRP 440



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 1/195 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +++F  +        V  +N L+  L  L +   A+K   E    G+ P+  
Sbjct: 349 KIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDII 408

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S ++   C  +   +A  ++  + D G  PN+ T+TIL++ LCK GRL++A  + + +
Sbjct: 409 TYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDL 468

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G    + TY  ++ G C  G  +EA  +L  +K++   PD  TY  ++        +
Sbjct: 469 LVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDEN 528

Query: 242 NEAMELLNEAIERGV 256
           ++A E L E I RG+
Sbjct: 529 DKA-EKLREMITRGL 542


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 204/415 (49%), Gaps = 24/415 (5%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE---ASSYGLAPNSWTFSIMIRC 129
           FD +    T  S+ D N  L +    +    A+  F      +   + PN  T+S++I C
Sbjct: 42  FDELLHRPTTSSIVDLNRAL-SDAARHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDC 100

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV-LDQMGRIGCKP 188
                    A   +  +  +G+     TF+ L+ +LC   R  EA+++ L +M  +GC P
Sbjct: 101 CSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTP 160

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEML--MNVKND---GLKPDVYTYTAVMDGFCKVGRS-N 242
           N+ +Y  LLKGLC   R ++A  +L  M V +D   G  PDV +Y  V++G  + GR  +
Sbjct: 161 NVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLD 220

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
            A  L ++ +++G++P+VVT+N++ +   K     K   +L  M K   +P++I++++LL
Sbjct: 221 TAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLL 280

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +G    GK   A+ +FK M R G E D    N+L+  LC           +A ++F+ M 
Sbjct: 281 HGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRS-----MEARKIFDSMV 335

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGE 418
           K+    +  TYG    TL  G  T+ +L+ +HH ++M    G  P    FN +I      
Sbjct: 336 KRGHKPNSATYG----TLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKH 391

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           GK+D A+LL   M      P   +Y +++  L  + K  DA A +G  + +G+ P
Sbjct: 392 GKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTP 446



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 204/411 (49%), Gaps = 15/411 (3%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + I +F  + +DG    V  +N L+  L        A K F      G  PNS T+  ++
Sbjct: 291 DAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLL 350

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             Y  +    +   ++D M  NG  P+   F IL+ +  K G++ +A+ +  +M R G  
Sbjct: 351 HGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLN 410

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TY  ++  LC VG+V++A      + ++GL PD   +  ++ G C   + ++A EL
Sbjct: 411 PDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEEL 470

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E I RG+ PN + FNTL N  CKEG   +   +  LM + +   D I+Y+TL++G   
Sbjct: 471 AVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCL 530

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK+  A  + + MV  G + +E   N+++ G C     +   +EDA+ +F +M  K   
Sbjct: 531 HGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYC-----KNGRIEDAFSLFRQMASK--G 583

Query: 368 TDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            +PG  TY  +++ L + ++T  A       I+ G      T+N ++  LC     D AL
Sbjct: 584 VNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDAL 643

Query: 426 LL---LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   L+L+  H  + +RT ++++I  L +  +  +A  L+ + L +G++P
Sbjct: 644 RIFQNLYLIDFH--LENRT-FNIMIDALLKGGRHDEAKDLFASLLARGLVP 691



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 194/430 (45%), Gaps = 36/430 (8%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFF-----SEASSYGLAPNSWTFSIMIRCYCNKN 134
           G   +V  +  LL  L   N  + A+        ++ +  G  P+  +++ +I     + 
Sbjct: 157 GCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREG 216

Query: 135 DFFE-ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
              + A  + D M D G  P+V T+  ++++L K+  + +A  VL +M + G  PN  T+
Sbjct: 217 RQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITH 276

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N LL G C  G+  +A  +   +  DG++PDV+TY  +M   CK GRS EA ++ +  ++
Sbjct: 277 NSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVK 336

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RG  PN  T+ TL +GY  EG+ +K   LL +M +    PD   ++ L+    K GK+  
Sbjct: 337 RGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDD 396

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A+ +F +M R G   D      ++  LCM    +  + +    + E +T    V     +
Sbjct: 397 AMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIH 456

Query: 374 GIVIR------------TLGKGKKTDEALIH--LHHAIEMGHIPRT-------------- 405
           G+  R             +G+G   +    +  L+H  + G + R               
Sbjct: 457 GLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQR 516

Query: 406 --ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             IT+N +I   C  GK+D+A  LL  M      P+  +Y+ +I    +  +  DA +L+
Sbjct: 517 DVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLF 576

Query: 464 GAALKQGVIP 473
                +GV P
Sbjct: 577 RQMASKGVNP 586



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 170/351 (48%), Gaps = 11/351 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D + ++G       FN L+       + + A+  FS+    GL P++ T+ I++   C
Sbjct: 365 LLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALC 424

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A      +   G  P+   F  L++ LC   +  +A E+  +M   G  PN  
Sbjct: 425 MVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNI 484

Query: 192 TYNCLLKGLC---YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
            +N LL  LC    V R +  +++++ V    ++ DV TY  ++DG+C  G+ +EA +LL
Sbjct: 485 FFNTLLNHLCKEGMVARAKNIFDLMVRVD---VQRDVITYNTLIDGYCLHGKVDEAAKLL 541

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
              +  GV PN VT+NT+ NGYCK G       L + M  +   P  ++YST+L GL + 
Sbjct: 542 EGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQA 601

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
            +   A  ++  M++ G + D    N +L GLC     + +  +DA ++F+ +       
Sbjct: 602 RRTAAAKELYLWMIKSGIKFDIGTYNIILLGLC-----QNNCTDDALRIFQNLYLIDFHL 656

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +  T+ I+I  L KG + DEA       +  G +P  +T+  ++++L  +G
Sbjct: 657 ENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 707



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 133/311 (42%), Gaps = 35/311 (11%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           F  +  +G       F +L+  L   ++ + A +   E    G+ PN+  F+ ++   C 
Sbjct: 436 FGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCK 495

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           +     A+ + D M       +V T+  L++  C  G++ EA ++L+ M   G KPN  T
Sbjct: 496 EGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVT 555

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN ++ G C  GR+E+A+ +   + + G+ P + TY+ ++ G  +  R+  A EL    I
Sbjct: 556 YNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMI 615

Query: 253 ERGVTPNVVTFNTLFNGYC-----------------------------------KEGTPM 277
           + G+  ++ T+N +  G C                                   K G   
Sbjct: 616 KSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHD 675

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   L   +  R  +P+ ++Y  ++  L++ G +     +F  + + G   + RM+N+L+
Sbjct: 676 EAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALV 735

Query: 338 RGLCMKSWEEK 348
             L  K    K
Sbjct: 736 GKLLQKGEVRK 746



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 35/285 (12%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN LL  L        A   F       +  +  T++ +I  YC      EA K+++ M 
Sbjct: 486 FNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMV 545

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G  PN  T+  ++N  CK+GR+++A  +  QM   G  P I TY+ +L+GL    R  
Sbjct: 546 LDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTA 605

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFC------------------------------- 236
            A E+ + +   G+K D+ TY  ++ G C                               
Sbjct: 606 AAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMI 665

Query: 237 ----KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
               K GR +EA +L    + RG+ PNVVT+  +     ++G   +   L   ++K  C 
Sbjct: 666 DALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCT 725

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
            +    + L+  LL+ G++R A     ++    F ++     SL+
Sbjct: 726 ANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 115/289 (39%), Gaps = 38/289 (13%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +IFD + +      V  +N L+    +  + + A K        G+ PN  T++ MI  Y
Sbjct: 504 NIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGY 563

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A  +   M   G +P + T++ ++  L ++ R   A E+   M + G K +I
Sbjct: 564 CKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDI 623

Query: 191 QTYNCLLKGLC---------------YV--------------------GRVEEAYEMLMN 215
            TYN +L GLC               Y+                    GR +EA ++  +
Sbjct: 624 GTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFAS 683

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +   GL P+V TY  +M    + G   E  +L     + G T N    N L     ++G 
Sbjct: 684 LLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGE 743

Query: 276 PMK-GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             K GV L K+ +    L    + S +L  L+  GK    ++   E  R
Sbjct: 744 VRKAGVYLSKIDENNFSLEASTAESLVL--LVSSGKYDQHINAIPEKYR 790



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 16/245 (6%)

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM---KKRNCLPDKIS 297
           S+ A    +E + R  T ++V  N   +   +  +P   + L + M    +    P+ I+
Sbjct: 35  SHHAHHAFDELLHRPTTSSIVDLNRALSDAARH-SPAVAISLFRRMVMVARPKVPPNLIT 93

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           YS +++   + G +  A +    ++R G+  +    + LL+ LC    ++K   E     
Sbjct: 94  YSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALC----DKKRTSEAMDIA 149

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM------GHIPRTITFNNV 411
             +M       +  +Y I+++ L    ++ +AL HL H + +      G+ P  +++N V
Sbjct: 150 LRRMPVLGCTPNVFSYTILLKGLCDENRSQQAL-HLLHTMMVADDTRGGYPPDVVSYNTV 208

Query: 412 IQALCGEGK-IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           I  L  EG+ +D A  L   M +    P   +Y+ +I+ L +      A  +    +K G
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268

Query: 471 VIPQR 475
            +P R
Sbjct: 269 AMPNR 273



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/205 (20%), Positives = 91/205 (44%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++   +F  +   G N  +  ++ +L  L        A + +      G+  +  
Sbjct: 565 KNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIG 624

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I++   C  N   +A ++   ++   +H    TF I++++L K GR  EA ++   +
Sbjct: 625 TYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASL 684

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN+ TY  ++K L   G +EE  ++ ++++ +G   +     A++    + G  
Sbjct: 685 LARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEV 744

Query: 242 NEAMELLNEAIERGVTPNVVTFNTL 266
            +A   L++  E   +    T  +L
Sbjct: 745 RKAGVYLSKIDENNFSLEASTAESL 769


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 189/389 (48%), Gaps = 6/389 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++      N  E+A          G +P+  T +IMI  +C K     A KV + + 
Sbjct: 47  YNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELL 106

Query: 148 -DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            DN   P + T+TIL+ +    G + EAL++LD+M   G +P+  TYN + +GLC  G+V
Sbjct: 107 KDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKV 166

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           + A+E +  + + G KPDV TY  ++      G+ +E  + ++E   RG  PNVVT++ L
Sbjct: 167 DRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSIL 226

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +  C++G   + V L+K+MK++   PD   Y  L+    + GK+  A+     M+  GF
Sbjct: 227 ISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGF 286

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             D    N+++  LC     +      A ++F K+ +     +  +Y  ++  L      
Sbjct: 287 LPDIVNYNTIMAALCKNGNGDH-----AVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDR 341

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
             AL  +   +  G  P  IT+N++I  LC +G +D+A+ LL  M      P+  SY  +
Sbjct: 342 YRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTV 401

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +  L +  +  DA  +  A ++ G  P  
Sbjct: 402 LLGLCKAHRIDDAIEVLAAMIENGCQPNE 430



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 180/364 (49%), Gaps = 6/364 (1%)

Query: 70  IDIFDSIKKDGT-NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
           + +F+ + KD     ++  +  L+ A ++    + A+K   E  S GL P+++T++++ R
Sbjct: 99  LKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITR 158

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
             C +     A + +  +   G  P+V T+ IL+ +L   G+  E  + + ++   GC+P
Sbjct: 159 GLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEP 218

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N+ TY+ L+  LC  G++EE+  ++  +K  GL PD Y Y  ++  FC+ G+ + A+E L
Sbjct: 219 NVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFL 278

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +  I  G  P++V +NT+    CK G     V +   + +  C P+  SY+T+L+ L   
Sbjct: 279 DCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSS 338

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G    A+ +  +M+  G + D    NSL+  LC        ++++A  +   M       
Sbjct: 339 GDRYRALGMISQMLSKGIDPDVITYNSLISCLC-----RDGMVDEAIGLLADMLSGRFQP 393

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +  +Y  V+  L K  + D+A+  L   IE G  P   T+  +I+ +   G   +A+ L 
Sbjct: 394 NIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELA 453

Query: 429 FLMY 432
             +Y
Sbjct: 454 NSLY 457



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 177/358 (49%), Gaps = 7/358 (1%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+    + +I+ + N  +  +A +V+  +  +G  P+V  +  +++  CK+ R++ A  V
Sbjct: 8   PDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTV 66

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFC 236
           LD+M R G  P++ T+N ++   C  G+++ A ++    +K++  KP + TYT +++ + 
Sbjct: 67  LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
             G  +EA++LL+E + RG+ P+  T+N +  G CKEG   +    ++ +  R C PD I
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y+ LL  LL  GK         E+   G E +    + L+  LC         +E++  
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGK-----IEESVN 241

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           + + M +K    D   Y  +I    +  K D A+  L   I  G +P  + +N ++ ALC
Sbjct: 242 LVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALC 301

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             G  D A+ +   + E    P+ +SY+ +++ L      Y A  +    L +G+ P 
Sbjct: 302 KNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPD 359



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 162/322 (50%), Gaps = 6/322 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D +   G       +N +   L    + + A +F    +S G  P+  T++I
Sbjct: 131 IDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNI 190

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++R   N+  + E  K +  +F  G  PNV T++IL++SLC+ G+++E++ ++  M   G
Sbjct: 191 LLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKG 250

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+   Y+ L+   C  G+++ A E L  +  DG  PD+  Y  +M   CK G  + A+
Sbjct: 251 LTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAV 310

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+  +  E G  PNV ++NT+ +     G   + +G++  M  +   PD I+Y++L++ L
Sbjct: 311 EIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCL 370

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G +  A+ +  +M+   F+ +     ++L GLC     +   ++DA +V   M +  
Sbjct: 371 CRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLC-----KAHRIDDAIEVLAAMIENG 425

Query: 366 SVTDPGTYGIVIRTLG-KGKKT 386
              +  TY ++I  +G  G +T
Sbjct: 426 CQPNETTYTLLIEGIGFSGSRT 447



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 131/263 (49%), Gaps = 7/263 (2%)

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +P++     L+KG      +++A  ++  ++  G KPDV+ Y AV+ GFCK  R   A  
Sbjct: 7   QPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKT 65

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGL 305
           +L+    +G +P+VVT N +   +C +G     + +  +L+K  NC P  I+Y+ L+   
Sbjct: 66  VLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAY 125

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
           +  G I  A+ +  EM+  G E D    N + RGLC +   ++     A++    +  + 
Sbjct: 126 ILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDR-----AFEFVRTLNSRG 180

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY I++R L    K DE    +      G  P  +T++ +I +LC +GKI++++
Sbjct: 181 CKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESV 240

Query: 426 LLLFLMYEHAKIPSRTSYDMLIT 448
            L+ +M E    P    YD LI 
Sbjct: 241 NLVKVMKEKGLTPDAYCYDPLIA 263


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 194/405 (47%), Gaps = 7/405 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D+F  I+  G       +   + A V L   +  ++F       G+ PN + ++++I  
Sbjct: 161 VDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGG 220

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C +    +A K+ D M +     ++ T+  L++  CK G L  A ++ ++M      PN
Sbjct: 221 LCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPN 280

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           I T+N LL GLC + +++EA  +L  ++ +G  PD YTY+ + DG  +    N AMEL  
Sbjct: 281 IITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYE 340

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +A E+G+  N  T + L NG CK+G   K   +LK   +   + D++ Y+T +NG  + G
Sbjct: 341 QATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG 400

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVT 368
            +  A+   + M  FG   +    NSL+   C MK       ++ A +  +KM +K    
Sbjct: 401 DMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKE------MDKAEEWVKKMAEKGVTP 454

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
              TY  +I   GK    D     L    E+G  P  +++ ++I  LC +GKI +A ++L
Sbjct: 455 SVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVL 514

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M     +P+   Y+MLI     + K  DA   +   ++  + P
Sbjct: 515 RDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISP 559



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 204/419 (48%), Gaps = 16/419 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L     + + +K+     ++  FN LL  L  + + + A     E    G  P+ +
Sbjct: 258 KVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGY 317

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+       +D   A ++ +   + G   N  T +IL+N LCK G++++A E+L + 
Sbjct: 318 TYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKF 377

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +   YN  + G C +G + +A   +  +++ GL+P+  T+ +++D FC +   
Sbjct: 378 TENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEM 437

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A E + +  E+GVTP+V T+NTL +GY K  T  +   +L+ M++    P+ +SY +L
Sbjct: 438 DKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSL 497

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +N L K GKI  A  + ++M+  G   + ++ N L+ G CM        ++DA + F++M
Sbjct: 498 INCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGK-----VKDALRFFDEM 552

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +        TY ++I  L K  K  EA   L      GH P  IT+N++I      G +
Sbjct: 553 MRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNV 612

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLIT-----KLDQLEKSYDACALYGAALKQGVIPQR 475
            K L L   M      P+  +Y  LI+      ++ +EK      LY   L+  ++P R
Sbjct: 613 SKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEK------LYNEMLQMNLLPDR 665



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 160/323 (49%), Gaps = 9/323 (2%)

Query: 141 KVIDCMFD---NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           KV+D   +   +G+  +   +   + +  K   LK  +E LD M + G +PN+  YN L+
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            GLC   R+ +A +M   + N  L   + TY  ++DG+CKVG  + A ++     E+ V 
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PN++TFN+L +G CK     +   LLK M+    +PD  +YS L +GLL+      A+ +
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           +++    G  ++    + LL GLC +   EK     A ++ +K T+   V D   Y   +
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEK-----AEEILKKFTENGLVADEVIYNTFV 393

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               +    ++A++ +      G  P +ITFN++I   C   ++DKA   +  M E    
Sbjct: 394 NGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVT 453

Query: 438 PSRTSYDMLITKLDQLEKSYDAC 460
           PS  +Y+ LI    +L  ++D C
Sbjct: 454 PSVETYNTLIDGYGKL-CTFDRC 475



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 187/401 (46%), Gaps = 9/401 (2%)

Query: 76  IKKDGTNWSVSD---FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           +KK   N  V+D   +N  +     + +   A+       S+GL PNS TF+ +I  +C+
Sbjct: 374 LKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCD 433

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
             +  +A + +  M + G  P+V T+  L++   K        ++L+QM  IG KPN+ +
Sbjct: 434 MKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVS 493

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y  L+  LC  G++ EA  +L ++   G+ P+   Y  ++DG C VG+  +A+   +E +
Sbjct: 494 YGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMM 553

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
              ++P +VT+N L +G CK+G   +    L  +      PD I+Y++L++G    G + 
Sbjct: 554 RSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVS 613

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
             + +++ M   G +   R  + L+ G        K+ +E   +++ +M +   + D   
Sbjct: 614 KCLGLYETMKNLGIKPTVRTYHPLISGC------SKEGIELVEKLYNEMLQMNLLPDRVV 667

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y  +I    +   T +A       ++ G  P  +T+N++I     EGK+     L+  M 
Sbjct: 668 YNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMK 727

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                P   +YD+L+     L+    A   Y   ++   +P
Sbjct: 728 AKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLP 768



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 125/255 (49%), Gaps = 5/255 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+    M+ + + A++FF E     ++P   T++++I   C K    EA   +  + 
Sbjct: 529 YNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQIT 588

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG--R 205
            +G+ P+V T+  L++    +G + + L + + M  +G KP ++TY+ L+ G    G   
Sbjct: 589 SSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIEL 648

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           VE+ Y  ++ +    L PD   Y A++  + ++G + +A  L    +++G+ P+ +T+N+
Sbjct: 649 VEKLYNEMLQM---NLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNS 705

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L  G+ +EG       L+  MK +   P   +Y  L+ G         A   ++EMV   
Sbjct: 706 LILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENN 765

Query: 326 FEVDERMMNSLLRGL 340
           F  +  + N L  GL
Sbjct: 766 FLPNASICNELTAGL 780



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 65/155 (41%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E   K ++E     L P+   ++ MI CY    +  +A  +   M D G HP+  T+  L
Sbjct: 647 ELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSL 706

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +    + G+L    ++++ M      P   TY+ L+KG C +     AY     +  +  
Sbjct: 707 ILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNF 766

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
            P+      +  G  + GR  E   + +E   +G+
Sbjct: 767 LPNASICNELTAGLEQEGRLQEVQVICSEMNVKGI 801


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 198/447 (44%), Gaps = 78/447 (17%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R+L A R  D        + + +  S++  G    V  +  L+  L    E + AV+   
Sbjct: 123 RALCADRLAD--------QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMG 174

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           E    G+ PN   +S +++ YC    + +  KV   M + G  P+V  +T L++SLCK G
Sbjct: 175 EMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVG 234

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           + K+A  V+D M R G +PN+ TYN L+  +C  G V+EA  +L  +   G+ PDV TY 
Sbjct: 235 KAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYN 294

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERG---VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            ++ G   V   +EAM LL E + RG   V PNVVTFN++  G C  G   +   +  +M
Sbjct: 295 TLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMM 353

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           ++  C+ + ++Y+ L+ GLL+  K+R A+ +  EM   G E D    + L++G C K W+
Sbjct: 354 EETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC-KMWQ 412

Query: 347 -------------------------------EKDLLEDAYQVFEKMTKKV---------- 365
                                          E+ ++E A  +F +M              
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTM 472

Query: 366 ------------------SVTDPG------TYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                             S+ D G      TY IVI    K    + A   L      G 
Sbjct: 473 IHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGF 532

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLL 428
           +P    F+++IQ    +G+I+K L L+
Sbjct: 533 LPDVAVFDSLIQGYSTKGEINKVLELI 559



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 204/394 (51%), Gaps = 19/394 (4%)

Query: 65  PLKERIDIFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETA---VKFFSEASSYGLAP 118
           PL E   + D++       SV D   +N +L AL      + A   ++  S        P
Sbjct: 60  PLGEATSLLDALP------SVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRP 113

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N+ ++++++R  C      +A  ++  M   G   +V T+  L+  LC +  + +A+E++
Sbjct: 114 NAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELM 173

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            +M   G +PN+  Y+ LL+G C  GR E+  ++ + +   G++PDV  YT ++D  CKV
Sbjct: 174 GEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G++ +A  +++  + RG+ PNVVT+N L N  CKEG+  + +G+LK M ++   PD ++Y
Sbjct: 234 GKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTY 293

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM--NSLLRGLCMKSWEEKDLLEDAYQ 356
           +TL+ GL    ++  A+ + +EMVR    V   ++  NS+++GLC     +   +  A+Q
Sbjct: 294 NTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLC-----DIGRMRQAFQ 348

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           V   M +   + +  TY ++I  L +  K  +A+  +     +G  P + T++ +I+  C
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC 408

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              ++D+A  LL  M +    P    Y  L+  +
Sbjct: 409 KMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM 442



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 165/325 (50%), Gaps = 10/325 (3%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMG---RIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           +  ++  ++ +LC+ G    A  +L  M       C+PN  +Y  L++ LC     ++A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L ++++ G++ DV TY  ++ G C     ++A+EL+ E  E G+ PNVV +++L  GY
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G       +   M ++   PD + Y+ L++ L K GK + A  +   MVR G E + 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N L+  +C     ++  +++A  V +KM++K    D  TY  +I+ L    + DEA+
Sbjct: 256 VTYNVLINCMC-----KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310

Query: 391 IHLHHAIEMGHI--PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
             L   +   +I  P  +TFN+VIQ LC  G++ +A  +  +M E   + +  +Y++LI 
Sbjct: 311 WLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIG 370

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L ++ K   A  L       G+ P
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEP 395



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 170/330 (51%), Gaps = 17/330 (5%)

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            PN  ++T+L+ +LC      +A+ +L  M   G + ++ TY  L++GLC    V++A E
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           ++  +   G++P+V  Y++++ G+CK GR  +  ++  E  E+G+ P+VV +  L +  C
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           K G   K  G++ +M +R   P+ ++Y+ L+N + K G ++ A+ + K+M   G   D  
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 332 MMNSLLRGLCMKSWEEKDLLE--DAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTD 387
             N+L++GL        D+LE  +A  + E+M +  ++  P   T+  VI+ L    +  
Sbjct: 292 TYNTLIKGL-------SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMR 344

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A        E G +   +T+N +I  L    K+ KA+ L+  M      P   +Y +LI
Sbjct: 345 QAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILI 404

Query: 448 ---TKLDQLEKSYDACALYGAALKQGVIPQ 474
               K+ Q++++ D   L      +G+ P+
Sbjct: 405 KGFCKMWQVDRAED---LLSTMRDRGIEPE 431



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 156/327 (47%), Gaps = 37/327 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA--SSYGLAPN 119
           K   +KE I +   + + G    V  +N L+  L  + E + A+    E       + PN
Sbjct: 267 KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPN 326

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             TF+ +I+  C+     +A +V   M + G   N+ T+ +L+  L +  ++++A+E++D
Sbjct: 327 VVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMD 386

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP---------------- 223
           +M  +G +P+  TY+ L+KG C + +V+ A ++L  +++ G++P                
Sbjct: 387 EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQG 446

Query: 224 ------------------DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
                             DV  Y+ ++ G CK G    A ELL   ++ G+TP+ VT++ 
Sbjct: 447 MMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSI 506

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + N + K G      G+LK M     LPD   + +L+ G    G+I   + + +EM+   
Sbjct: 507 VINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKN 566

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLE 352
             +D +++++L   L + S E K LL+
Sbjct: 567 IALDSKIISTLSTSL-VASNEGKALLQ 592


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 221/444 (49%), Gaps = 43/444 (9%)

Query: 70  IDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
           +D+F  +++  G    +  +N LL A V   +       F+   + G+APN  T++++I+
Sbjct: 98  LDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIK 157

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR----- 183
             C K +F +AR  ++ M+  G+ P+V +++ ++N L K+G+L +ALE+ D+M       
Sbjct: 158 MSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAP 217

Query: 184 -IGC------------------------------KPNIQTYNCLLKGLCYVGRVEEAYEM 212
            + C                               PN++T+N ++ GL   GRV++  ++
Sbjct: 218 DVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +K +  + D+YTY++++ G C  G  ++A  + NE +ER    +VVT+NT+  G+C+
Sbjct: 278 WDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCR 337

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   + + L ++M++RN + + +SY+ L+ GLL+ GKI  A  I++ M   G+  D   
Sbjct: 338 CGKIKESLELWRIMEQRNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTT 396

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
               + GLC+  +  K     A  V +++  K    D   Y  +I  L K ++ +EA   
Sbjct: 397 YGIFIHGLCVNGYVNK-----ALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNL 451

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           +    + G    +   N +I  L  + ++  A LL+  M ++  +P+  SY++LI  L +
Sbjct: 452 VKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCE 511

Query: 453 LEKSYDACALYGAALKQGVIPQRK 476
             K  +A A     L+ G+ P  K
Sbjct: 512 AGKFGEASAFVKEMLENGLKPDLK 535



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 124/239 (51%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+    E  S G   + + ++ +I C C K    EA  ++  M  +G   N      L+ 
Sbjct: 413 ALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIG 472

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            L +  RL +A  ++  MG+ GC P + +YN L+ GLC  G+  EA   +  +  +GLKP
Sbjct: 473 GLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKP 532

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D+ TY+ ++ G C+  +   A+EL ++ ++ G+ P+V+  N L +G C  G     + ++
Sbjct: 533 DLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVM 592

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
             M+ RNC  + ++Y+TL+ G  K      A  I+  M + G + D    N++L+GLC+
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCL 651



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 129/271 (47%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +   ++  G +  V  +  ++  L      E A     E S +G+  NS   + +I  
Sbjct: 414 LGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGG 473

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
               +   +A  ++  M  NG  P V ++ IL+  LC++G+  EA   + +M   G KP+
Sbjct: 474 LIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPD 533

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           ++TY+ LL GLC   ++E A E+       GL+PDV  +  ++ G C VG+ ++AM ++ 
Sbjct: 534 LKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMA 593

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
               R  T N+VT+NTL  GY K     +   +   M K    PD ISY+T+L GL    
Sbjct: 594 NMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCH 653

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           ++  A+  F +    G        N L+R +
Sbjct: 654 RVSYAIEFFDDARNHGIFPTVYTWNILVRAV 684



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 98/416 (23%), Positives = 182/416 (43%), Gaps = 31/416 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + I+D +K++     +  ++ L+  L      + A   F+E        +  
Sbjct: 267 KCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVV 326

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ M+  +C      E+ ++   M +     N+ ++ IL+  L ++G++ EA  +   M
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIM-EQRNSVNIVSYNILIKGLLENGKIDEATMIWRLM 385

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +  TY   + GLC  G V +A  ++  V++ G   DVY Y +++D  CK  R 
Sbjct: 386 PAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRL 445

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L+ E  + GV  N    N L  G  ++        L++ M K  CLP  +SY+ L
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNIL 505

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC---------------MKSWE 346
           + GL + GK   A +  KEM+  G + D +  + LL GLC               ++S  
Sbjct: 506 ICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGL 565

Query: 347 EKDL---------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
           E D+               L+DA  V   M  +    +  TY  ++    K + ++ A +
Sbjct: 566 EPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATV 625

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              +  +MG  P  I++N +++ LC   ++  A+        H   P+  ++++L+
Sbjct: 626 IWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILV 681



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+ S L +   +   + K+G   +V  +N L+  L    +   A  F  E    GL P+ 
Sbjct: 475 IRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDL 534

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+SI++   C       A ++      +G  P+V    IL++ LC  G+L +A+ V+  
Sbjct: 535 KTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMAN 594

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M    C  N+ TYN L++G   V     A  +   +   GL+PD+ +Y  ++ G C   R
Sbjct: 595 MEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHR 654

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTL 266
            + A+E  ++A   G+ P V T+N L
Sbjct: 655 VSYAIEFFDDARNHGIFPTVYTWNIL 680


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 198/447 (44%), Gaps = 78/447 (17%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R+L A R  D        + + +  S++  G    V  +  L+  L    E + AV+   
Sbjct: 123 RALCADRLAD--------QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMG 174

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           E    G+ PN   +S +++ YC    + +  KV   M + G  P+V  +T L++SLCK G
Sbjct: 175 EMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVG 234

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           + K+A  V+D M R G +PN+ TYN L+  +C  G V+EA  +L  +   G+ PDV TY 
Sbjct: 235 KAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYN 294

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERG---VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            ++ G   V   +EAM LL E + RG   V PNVVTFN++  G C  G   +   +  +M
Sbjct: 295 TLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMM 353

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           ++  C+ + ++Y+ L+ GLL+  K+R A+ +  EM   G E D    + L++G C K W+
Sbjct: 354 EETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC-KMWQ 412

Query: 347 -------------------------------EKDLLEDAYQVFEKMTKKV---------- 365
                                          E+ ++E A  +F +M              
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTM 472

Query: 366 ------------------SVTDPG------TYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                             S+ D G      TY IVI    K    + A   L      G 
Sbjct: 473 IHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGF 532

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLL 428
           +P    F+++IQ    +G+I+K L L+
Sbjct: 533 LPDVAVFDSLIQGYSTKGEINKVLELI 559



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 204/394 (51%), Gaps = 19/394 (4%)

Query: 65  PLKERIDIFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETA---VKFFSEASSYGLAP 118
           PL E   + D++       SV D   +N +L AL      + A   ++  S        P
Sbjct: 60  PLGEATSLLDALP------SVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRP 113

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N+ ++++++R  C      +A  ++  M   G   +V T+  L+  LC +  + +A+E++
Sbjct: 114 NAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELM 173

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            +M   G +PN+  Y+ LL+G C  GR E+  ++ + +   G++PDV  YT ++D  CKV
Sbjct: 174 GEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G++ +A  +++  + RG+ PNVVT+N L N  CKEG+  + +G+LK M ++   PD ++Y
Sbjct: 234 GKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTY 293

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM--NSLLRGLCMKSWEEKDLLEDAYQ 356
           +TL+ GL    ++  A+ + +EMVR    V   ++  NS+++GLC     +   +  A+Q
Sbjct: 294 NTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLC-----DIGRMRQAFQ 348

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           V   M +   + +  TY ++I  L +  K  +A+  +     +G  P + T++ +I+  C
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC 408

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              ++D+A  LL  M +    P    Y  L+  +
Sbjct: 409 KMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM 442



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 165/325 (50%), Gaps = 10/325 (3%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMG---RIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           +  ++  ++ +LC+ G    A  +L  M       C+PN  +Y  L++ LC     ++A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L ++++ G++ DV TY  ++ G C     ++A+EL+ E  E G+ PNVV +++L  GY
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G       +   M ++   PD + Y+ L++ L K GK + A  +   MVR G E + 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N L+  +C     ++  +++A  V +KM++K    D  TY  +I+ L    + DEA+
Sbjct: 256 VTYNVLINCMC-----KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310

Query: 391 IHLHHAIEMGHI--PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
             L   +   +I  P  +TFN+VIQ LC  G++ +A  +  +M E   + +  +Y++LI 
Sbjct: 311 WLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIG 370

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L ++ K   A  L       G+ P
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEP 395



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 170/329 (51%), Gaps = 17/329 (5%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           PN  ++T+L+ +LC      +A+ +L  M   G + ++ TY  L++GLC    V++A E+
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           +  +   G++P+V  Y++++ G+CK GR  +  ++  E  E+G+ P+VV +  L +  CK
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   K  G++ +M +R   P+ ++Y+ L+N + K G ++ A+ + K+M   G   D   
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292

Query: 333 MNSLLRGLCMKSWEEKDLLE--DAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDE 388
            N+L++GL        D+LE  +A  + E+M +  ++  P   T+  VI+ L    +  +
Sbjct: 293 YNTLIKGL-------SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQ 345

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI- 447
           A        E G +   +T+N +I  L    K+ KA+ L+  M      P   +Y +LI 
Sbjct: 346 AFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIK 405

Query: 448 --TKLDQLEKSYDACALYGAALKQGVIPQ 474
              K+ Q++++ D   L      +G+ P+
Sbjct: 406 GFCKMWQVDRAED---LLSTMRDRGIEPE 431



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 156/327 (47%), Gaps = 37/327 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA--SSYGLAPN 119
           K   +KE I +   + + G    V  +N L+  L  + E + A+    E       + PN
Sbjct: 267 KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPN 326

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             TF+ +I+  C+     +A +V   M + G   N+ T+ +L+  L +  ++++A+E++D
Sbjct: 327 VVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMD 386

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP---------------- 223
           +M  +G +P+  TY+ L+KG C + +V+ A ++L  +++ G++P                
Sbjct: 387 EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQG 446

Query: 224 ------------------DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
                             DV  Y+ ++ G CK G    A ELL   ++ G+TP+ VT++ 
Sbjct: 447 MMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSI 506

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + N + K G      G+LK M     LPD   + +L+ G    G+I   + + +EM+   
Sbjct: 507 VINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKN 566

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLE 352
             +D +++++L   L + S E K LL+
Sbjct: 567 IALDSKIISTLSTSL-VASNEGKALLQ 592


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 194/386 (50%), Gaps = 8/386 (2%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  FN +L +LV +N   TA+  F +    G+ P+  T +I++ CYC+         ++ 
Sbjct: 10  ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILT 69

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY PN  TFT L+  +C +G+  EAL   D +   G K +  +Y  L+ GLC +G
Sbjct: 70  KILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG 129

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A +ML   +   +  DV  Y+ ++D  CK     +A  L +E I +G+ PNV TF+
Sbjct: 130 ETRAAMQML---RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFS 186

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +  CK+    + + LL +M K+   P+ ++Y  +++G     ++  A++IF  MV+ 
Sbjct: 187 ILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQE 246

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G E +    N ++ GLC     +K  +++A  +F++M  K    D  TY I+I  L K  
Sbjct: 247 GVEPNVWCYNIIINGLC-----KKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLG 301

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           K   +L  +     +G     IT+N+++ ALC    +D+A+ L+  + +    P+  +Y 
Sbjct: 302 KISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYT 361

Query: 445 MLITKLDQLEKSYDACALYGAALKQG 470
            LI  L +  +  DA  ++   L +G
Sbjct: 362 TLIDGLCKDGRLEDAYVIFQEILTEG 387



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 170/318 (53%), Gaps = 8/318 (2%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++K   N  V  ++ ++ +L        A + +SE  + G+ PN +TFSI++   C    
Sbjct: 138 LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRK 197

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             +A  ++  M   G  PNV T+  +++  C   ++ +AL + + M + G +PN+  YN 
Sbjct: 198 GKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNI 257

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           ++ GLC   RV+EA  +   +    + PDV TY  ++DG CK+G+ + ++EL++E    G
Sbjct: 258 IINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIG 317

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
            T +++T+N+L +  CK     + + L+K +K +   P+  +Y+TL++GL K G++  A 
Sbjct: 318 KTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAY 377

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            IF+E++  G+ +     N ++ GLC     +K L ++A  +  +M     + D  +Y  
Sbjct: 378 VIFQEILTEGYHITVWTYNVMINGLC-----KKGLFDEALALLSRMEDNACIPDAVSYET 432

Query: 376 VIRTL---GKGKKTDEAL 390
           +I  L   G+  KT++ L
Sbjct: 433 IIYALSEKGETVKTNKLL 450



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 139/260 (53%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K+ +++   + K G   +V  +  ++    ++N+   A+  F+     G+ PN W ++I+
Sbjct: 199 KQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNII 258

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I   C K    EA  +   M     +P+V T+ IL++ LCK G++  +LE++D+M  IG 
Sbjct: 259 INGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGK 318

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
             +I TYN LL  LC    +++A  ++  +K+ G++P+V TYT ++DG CK GR  +A  
Sbjct: 319 TVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYV 378

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           +  E +  G    V T+N + NG CK+G   + + LL  M+   C+PD +SY T++  L 
Sbjct: 379 IFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALS 438

Query: 307 KWGKIRPAVSIFKEMVRFGF 326
           + G+      +   M+  G 
Sbjct: 439 EKGETVKTNKLLCAMIVRGL 458



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 136/283 (48%), Gaps = 8/283 (2%)

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M +I   P I  +N +L  L  +     A  +   ++ +G+KP + T T +M+ +C  G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
                 +L + ++ G  PN +TF TL  G C  G   + +     +       D++SY+ 
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NGL K G+ R A+ + +   +     D  M ++++  LC     +   + DAY+++ +
Sbjct: 121 LMNGLCKMGETRAAMQMLR---KTWVNADVVMYSTIIDSLC-----KGKFVTDAYRLYSE 172

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  K    +  T+ I++  L K +K  +A+  L   ++ G  P  +T+  ++   C   +
Sbjct: 173 MIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQ 232

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           ++KAL +  +M +    P+   Y+++I  L + ++  +A  L+
Sbjct: 233 VNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLF 275



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 140/303 (46%), Gaps = 8/303 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +  F  ++ SL K      A+ +  Q+   G KP+I T   L+   C+ G +   + +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +P+  T+T ++ G C  G++ EA+   +  +  G   + V++  L NG CK
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G        +++++K     D + YST+++ L K   +  A  ++ EM+  G   +   
Sbjct: 128 MGETRAA---MQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            + L+  LC K  + K     A  +   M KK    +  TYG ++       + ++AL  
Sbjct: 185 FSILVDALC-KDRKGK----QAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNI 239

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            +  ++ G  P    +N +I  LC + ++D+A+ L   M+     P   +Y++LI  L +
Sbjct: 240 FNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCK 299

Query: 453 LEK 455
           L K
Sbjct: 300 LGK 302



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 98/196 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +++F  +     N  V  +N L+  L  L +  T+++   E  S G   +  
Sbjct: 264 KKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDII 323

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C  +   +A  ++  + D G  PNV T+T L++ LCK GRL++A  +  ++
Sbjct: 324 TYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEI 383

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G    + TYN ++ GLC  G  +EA  +L  ++++   PD  +Y  ++    + G +
Sbjct: 384 LTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGET 443

Query: 242 NEAMELLNEAIERGVT 257
            +  +LL   I RG++
Sbjct: 444 VKTNKLLCAMIVRGLS 459


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 182/373 (48%), Gaps = 10/373 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A K F +    G  P++ T++ +I  +   +   EARK++D M   G  P   T+  +V+
Sbjct: 197 ACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVH 256

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             CK   + EA EV+ QM   GC+P +  +  LL      GR EEAY++L  +   G  P
Sbjct: 257 GFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP 316

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV  YT+++D     GR  EA  + +  IE+G  P+ +T+ T+   + K G       +L
Sbjct: 317 DVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEIL 376

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           +LM K    PD  +Y++L++G +K  ++  A  ++  MV  G + +    N L+ GL   
Sbjct: 377 ELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKD 436

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGT---YGIVIRTLGKGKKTDEALIHLHHAIEMG 400
              ++     A+ +F++M +K  V  P T   Y I+I  LGK  +  EA +     I+ G
Sbjct: 437 GKTDR-----AFSLFKEMLEKEEV--PPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRG 489

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
            IP   T+ ++I +L   G+I +A  L+  M +    P   +Y  LIT L        A 
Sbjct: 490 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAW 549

Query: 461 ALYGAALKQGVIP 473
            ++   +K+G  P
Sbjct: 550 DVFQEMMKRGCAP 562



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 190/395 (48%), Gaps = 6/395 (1%)

Query: 81  TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEAR 140
            +  V  +  ++  L      + A + F E  + G +PN   ++ +I          +  
Sbjct: 104 ASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGL 163

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           K  + M  +   P  TT+T++++ LCK+  L +A +V +QM + GC P+  TY  L+ G 
Sbjct: 164 KNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF 223

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
               +++EA ++L  +   G +P   TY +++ GFCK+   NEA E++ +  ERG  P +
Sbjct: 224 SKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGL 283

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
             F +L + Y  +G   +   +L  M  R C PD I Y++L++ L   G++  A  +F  
Sbjct: 284 FIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDS 343

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M+  G   D     +L  G  ++++ +   +E A ++ E M K     D   Y  ++   
Sbjct: 344 MIEKGCAPD-----ALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGY 398

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI-PS 439
            K ++ D+A       +  G  P  +TFN ++  L  +GK D+A  L   M E  ++ P+
Sbjct: 399 VKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPT 458

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             SY +LI  L +  +  +A   +   + +G+IP+
Sbjct: 459 LVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPE 493



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 201/428 (46%), Gaps = 10/428 (2%)

Query: 51  SLQAQRFVDRIKASPLKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           SL    +   IK     +RID    +F+ +K  G + +V  +  ++  L+     E  +K
Sbjct: 105 SLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLK 164

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F E S     P   T++++I   C      +A KV + M   G  P+  T+T L++   
Sbjct: 165 NFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFS 224

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K+ ++ EA ++LD M   G +P   TY  ++ G C +  + EA E++  ++  G +P ++
Sbjct: 225 KASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLF 284

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            +T+++  +   GR+ EA ++L E   RG  P+V+ + +L +     G   +   +   M
Sbjct: 285 IFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 344

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            ++ C PD ++Y T++    K G +  A  I + M + G   D    NSL+ G     + 
Sbjct: 345 IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG-----YV 399

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT- 405
           + + ++ A+ V+++M       +  T+ +++  L K  KTD A       +E   +P T 
Sbjct: 400 KLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTL 459

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           +++  +I  L   G++ +A L    M +   IP   +Y  LI  L +  +  +A  L   
Sbjct: 460 VSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVED 519

Query: 466 ALKQGVIP 473
            +K GV P
Sbjct: 520 MVKLGVNP 527



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 182/425 (42%), Gaps = 36/425 (8%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN------- 132
           G   ++  +N ++  L  +++ + A KFF+     G  P+   F+ +I  +C        
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 133 -----------KNDFFEARKVIDCM-----FDNGYHPNVT--------TFTILVNSLCKS 168
                      + D F    VI         D GY   VT        ++T ++  L  S
Sbjct: 62  HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
            R+ EA E+ +++   GC PN+  Y  ++ GL   GR+E+  +    +      P   TY
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           T V+DG CK     +A ++  + +++G  P+ +T+ TL +G+ K     +   LL +M  
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 241

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           +   P  ++Y ++++G  K   I  A  +  +M   G E    +  SLL       +  K
Sbjct: 242 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL-----SYYLSK 296

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
              E+AYQV  +MT +    D   Y  +I  L    +  EA       IE G  P  +T+
Sbjct: 297 GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTY 356

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
             +IQ     G ++ A  +L LM +    P   +Y+ L+    +LE+   A  +Y   + 
Sbjct: 357 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA 416

Query: 469 QGVIP 473
            G+ P
Sbjct: 417 SGIKP 421



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 141/288 (48%), Gaps = 38/288 (13%)

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
           +GC+P I +YN ++ GL  + +++EAY+   ++ ++G +PDV  +T ++ GFCK G+   
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEG----------------------TPMKGVG 281
             +LLN+A++R   P+V  + ++ +GYCK G                      T +KG+ 
Sbjct: 61  GHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA 119

Query: 282 ----------LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
                     L + +K   C P+ ++Y+ +++GLLK G+I   +  F+EM          
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
               ++ GLC     +  +L DA +VFE+M +K  V D  TY  +I    K  K DEA  
Sbjct: 180 TYTVVIDGLC-----KAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARK 234

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
            L   +  G  P  +T+ +++   C    I++A  ++  M E    P 
Sbjct: 235 LLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPG 282



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 36/311 (11%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E  ++   +++ G    +  F  LL   +     E A +  +E ++ G AP+   ++ 
Sbjct: 264 INEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTS 323

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I    +     EAR V D M + G  P+  T+  ++ +  K G ++ A E+L+ M + G
Sbjct: 324 LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG 383

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT------------------ 227
             P+   YN L+ G   + RV++A+ +   +   G+KP+  T                  
Sbjct: 384 VGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAF 443

Query: 228 ------------------YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
                             YT ++DG  K GR +EA     E I+RG+ P   T+ +L   
Sbjct: 444 SLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYS 503

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
             K G   +   L++ M K    PD  +YS L+ GL+    +  A  +F+EM++ G   +
Sbjct: 504 LAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPN 563

Query: 330 ERMMNSLLRGL 340
           E     L RG 
Sbjct: 564 EVTYKVLRRGF 574



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 1/240 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FDS+ + G       +  ++     +   E A +     +  G+ P+ + ++ ++  Y 
Sbjct: 340 VFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYV 399

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNI 190
                 +A  V D M  +G  PN  TF +L++ L K G+   A  +  +M  +    P +
Sbjct: 400 KLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTL 459

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  L+ GL   GRV EA+     + + G+ P+ +TYT+++    K GR  EA +L+ +
Sbjct: 460 VSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVED 519

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            ++ GV P+V  ++ L  G            + + M KR C P++++Y  L  G    G+
Sbjct: 520 MVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 579



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 1/205 (0%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I + + K G       +N L+   V L   + A   +    + G+ PN+ TF++++   
Sbjct: 374 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 433

Query: 131 CNKNDFFEARKVIDCMFD-NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
                   A  +   M +     P + ++TIL++ L K+GR+ EA     +M   G  P 
Sbjct: 434 FKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPE 493

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TY  L+  L   GR+ EA +++ ++   G+ PDV  Y+A++ G       + A ++  
Sbjct: 494 CHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQ 553

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEG 274
           E ++RG  PN VT+  L  G+   G
Sbjct: 554 EMMKRGCAPNEVTYKVLRRGFRAAG 578



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 6/195 (3%)

Query: 68  ERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNSWT 122
           ER+D    ++D +   G   +   FN L+  L    + + A   F E      + P   +
Sbjct: 402 ERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVS 461

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I          EA      M D G  P   T+T L+ SL K+GR+ EA ++++ M 
Sbjct: 462 YTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV 521

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           ++G  P++Q Y+ L+ GL     V+ A+++   +   G  P+  TY  +  GF   GR+ 
Sbjct: 522 KLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRAL 581

Query: 243 EAMELLNEAIERGVT 257
           + +E + +   +GV 
Sbjct: 582 D-LEAVKQHFSQGVA 595


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 193/395 (48%), Gaps = 6/395 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G       F  L++        E A    +     G + +S T ++++R +C +  F + 
Sbjct: 176 GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDV 235

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             +   M + G  PNV  +T  V+ LCK G +K+A  VL++M   G KPN+ T+  L+ G
Sbjct: 236 PGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295

Query: 200 LCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           LC +G  E A+ + +  VK+   KP+V+TYT ++ G+CK G+   A  LL   +E+G+ P
Sbjct: 296 LCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           N  T+ TL +G+C+ G+  +   L+  MK    LP+  +Y+ ++ G  K GKI+ A  + 
Sbjct: 356 NTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVL 415

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           +     G   D+     L+   C     ++  +  A  +F +M +     D  TY  +I 
Sbjct: 416 RMATSQGLCPDKVTYTMLITEHC-----KQGHITYALDLFNQMAENSCHPDIDTYTTIIA 470

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
              + ++ +++       + +G +P   T+ ++I   C  GK   AL +   M +H  +P
Sbjct: 471 MYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLP 530

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              +Y  LI+ L +  +  +A AL+   L + ++P
Sbjct: 531 DPITYGALISGLCKESRLEEARALFETMLDKHMVP 565



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 185/393 (47%), Gaps = 10/393 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  + + G   +V ++   +  L      + A     E    GL PN +T + +I   C
Sbjct: 238 LFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLC 297

Query: 132 NKNDFFEA-RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
                  A R  +  +  + Y PNV T+T+++   CK G+L  A  +L +M   G  PN 
Sbjct: 298 KIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNT 357

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  L+ G C  G  + A+E++  +K +G  P++YTY A++ GFCK G+  +A ++L  
Sbjct: 358 NTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRM 417

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
           A  +G+ P+ VT+  L   +CK+G     + L   M + +C PD  +Y+T++    +  +
Sbjct: 418 ATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQ 477

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  +  +F + +  G    ++   S++ G C            A +VFE+M +   + DP
Sbjct: 478 MEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKS-----TSALKVFERMVQHGCLPDP 532

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TYG +I  L K  + +EA       ++   +P  +T   +    C   + DK  + +  
Sbjct: 533 ITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYC---RRDKTTIAVSF 589

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +    K     + D L+ KL  ++ + DA +L+
Sbjct: 590 LDGLDKRQQAHAADALVRKLSAVD-NLDAASLF 621



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 184/412 (44%), Gaps = 43/412 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E  D+   ++  G    V   N +L   V L ++             G+ P++ +F  
Sbjct: 129 LREATDMLLELRSHGLPLVVETANWVLR--VGLRQRHHFAHARQAFDGMGVRPDARSFRA 186

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C +  F EA  ++  M+  G+  +  T T++V + C+ GR ++   +  +M  +G
Sbjct: 187 LVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMG 246

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+  Y   + GLC  G V++A+ +L  +   GLKP+VYT+T+++DG CK+G +  A 
Sbjct: 247 NPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAF 306

Query: 246 ELLNEAIERG-VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            L  + ++     PNV T+  +  GYCKEG   +   LL  M ++   P+  +Y+TL++G
Sbjct: 307 RLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDG 366

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             + G    A  +  +M   GF  +    N+++ G C     +K  ++ AY+V       
Sbjct: 367 HCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFC-----KKGKIQQAYKV------- 414

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
                                       L  A   G  P  +T+  +I   C +G I  A
Sbjct: 415 ----------------------------LRMATSQGLCPDKVTYTMLITEHCKQGHITYA 446

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           L L   M E++  P   +Y  +I    Q  +   +  L+   L  G++P ++
Sbjct: 447 LDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQ 498



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 136/297 (45%), Gaps = 8/297 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
            ++ + +K +G   ++  +N ++       + + A K    A+S GL P+  T++++I  
Sbjct: 377 FELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITE 436

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C +     A  + + M +N  HP++ T+T ++   C+  +++++ ++ D+   IG  P 
Sbjct: 437 HCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPT 496

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
            QTY  ++ G C VG+   A ++   +   G  PD  TY A++ G CK  R  EA  L  
Sbjct: 497 KQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFE 556

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             +++ + P  VT  TL   YC+       V  L  + KR       +   L+  L    
Sbjct: 557 TMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQ---QAHAADALVRKLSAVD 613

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
            +  A    K ++   + VD     S +      S  E +    A ++ EK++K++S
Sbjct: 614 NLDAASLFLKNVLDKHYAVDHATYTSFI-----NSCYESNRYALASEISEKISKRIS 665


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 198/420 (47%), Gaps = 30/420 (7%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+  L   ++ + A ++     + G  P+ +T++ +I  YC ++   EA +++ 
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
                G+ P+  T+  L+N LC  G ++ ALE+ ++      KP++  YN L+KGLC  G
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            +  A +++  +  DG  PD++TY  V++G CK+G  ++A  ++N+AI +G  P+V TFN
Sbjct: 304 LILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFN 363

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           T+ +GYCK       + L++ M      PD I+Y+++LNGL K GK +     F+EM+  
Sbjct: 364 TMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILK 423

Query: 325 GFEVDERMMNSLLRGLC-MKSWEEKDL-----------------------------LEDA 354
           G   +    N L+   C +   EE                                L+ A
Sbjct: 424 GCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGA 483

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           Y +F+K+ +K       T+ I+I           A       I  G+ P   T+  ++  
Sbjct: 484 YLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDG 543

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            C    +D+A + L  M     +PS  ++  ++  L    +  +A A+    ++ GV+P+
Sbjct: 544 SCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPE 603



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 187/376 (49%), Gaps = 6/376 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + +      V+ FN++L AL    +   +    ++    G++ N +T +I IR  C
Sbjct: 102 LFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLC 161

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA  +++ M D    P+V T+  L+  LCK  +++EA + L +M   GC P+  
Sbjct: 162 EGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDF 220

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN ++ G C    ++EA E+L +    G  PD  TY ++++G C  G    A+EL NEA
Sbjct: 221 TYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEA 280

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             + + P++V +N+L  G C++G  +  + ++  M +  C PD  +Y+ ++NGL K G I
Sbjct: 281 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNI 340

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +  + +  G+  D    N+++ G C     ++  L+ A Q+ E+M       D  
Sbjct: 341 SDAAVVMNDAIVKGYLPDVFTFNTMIDGYC-----KRLKLDSALQLVERMWMYGIAPDAI 395

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  V+  L K  K  E        I  G  P  IT+N +I+  C   ++++A  ++  M
Sbjct: 396 TYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRM 455

Query: 432 YEHAKIPSRTSYDMLI 447
            +   +P   S++ LI
Sbjct: 456 SQDGLVPDTISFNTLI 471



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 183/372 (49%), Gaps = 6/372 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E AV       +Y +AP+  T++ ++R  C  +   EA + +  M + G  P+  T+  +
Sbjct: 167 EEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTI 225

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++  CK   L+EA E+L      G  P+  TY  L+ GLC  G VE A E+    +   L
Sbjct: 226 IDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDL 285

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           KPD+  Y +++ G C+ G    A++++NE +E G  P++ T+N + NG CK G       
Sbjct: 286 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAV 345

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           ++     +  LPD  +++T+++G  K  K+  A+ + + M  +G   D    NS+L GLC
Sbjct: 346 VMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLC 405

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
            K+ + K++ E     FE+M  K    +  TY I+I    K  + +EA   +    + G 
Sbjct: 406 -KAGKAKEVNE----TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGL 460

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           +P TI+FN +I   C  G +D A LL   + E     +  ++++LI           A  
Sbjct: 461 VPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 520

Query: 462 LYGAALKQGVIP 473
           ++G  + +G  P
Sbjct: 521 IFGEMISKGYKP 532



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 192/416 (46%), Gaps = 31/416 (7%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++ ALV     + A K +    S G+AP++ T ++ I+ +C       A +++  + 
Sbjct: 13  YNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLP 72

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G       +  +V  L   G   +A  + D+M R    P++ T+N +L  LC  G + 
Sbjct: 73  ERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIM 132

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           E+  +L  V   G+  + +T    + G C+ GR  EA+ L+ E+++  + P+VVT+NTL 
Sbjct: 133 ESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALV-ESMDAYIAPDVVTYNTLM 191

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G CK+    +    L+ M  + C+PD  +Y+T+++G  K   ++ A  + K+ +  GF 
Sbjct: 192 RGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFV 251

Query: 328 VDERMMNSLLRGLCMKS-----------WEEKDLLED-------------------AYQV 357
            D     SL+ GLC +             + KDL  D                   A QV
Sbjct: 252 PDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 311

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
             +M +     D  TY IVI  L K     +A + ++ AI  G++P   TFN +I   C 
Sbjct: 312 MNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCK 371

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             K+D AL L+  M+ +   P   +Y+ ++  L +  K+ +    +   + +G  P
Sbjct: 372 RLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRP 427



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 164/341 (48%), Gaps = 5/341 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++  +++F+  +       +  +N L+  L        A++  +E    G  P+ WT++I
Sbjct: 270 VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNI 329

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C   +  +A  V++     GY P+V TF  +++  CK  +L  AL+++++M   G
Sbjct: 330 VINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYG 389

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TYN +L GLC  G+ +E  E    +   G +P+  TY  +++ FCK+ +  EA 
Sbjct: 390 IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 449

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            ++    + G+ P+ ++FNTL +G+C+ G       L + + ++       +++ L+   
Sbjct: 450 GVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAY 509

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
                ++ A  IF EM+  G++ D      L+ G C  +  ++     AY    +M  K 
Sbjct: 510 SSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDR-----AYVHLAEMVSKG 564

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
            V    T+G V+ +L    +  EA+  +H  + MG +P  +
Sbjct: 565 FVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV 605



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 6/301 (1%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G  P    +  ++++L  +    +A +V  +M   G  P+ +T+   +K  C  GR   A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             +L ++   G       Y  V+ G    G   +A  L +E + R V P+V TFN + + 
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            C++G  M+   LL  + KR    +K + +  + GL + G++  AV++ + M  +    D
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPD 183

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N+L+RGLC  S      +++A Q   +M  +  + D  TY  +I    K     EA
Sbjct: 184 VVTYNTLMRGLCKDSK-----VQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEA 238

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
              L  AI  G +P  +T+ ++I  LC EG +++AL L          P    Y+ L+  
Sbjct: 239 TELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKG 298

Query: 450 L 450
           L
Sbjct: 299 L 299



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 6/270 (2%)

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC P    YN ++  L      ++A+++ + + + G+ PD  T+T  +  FC  GR
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A+ LL    ERG     + + T+  G    G       L   M +R+  PD  +++ 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +L+ L + G I  + ++  ++++ G  V++   N  +RGLC     E   LE+A  + E 
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLC-----EGGRLEEAVALVES 175

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M   ++  D  TY  ++R L K  K  EA  +L   +  G IP   T+N +I   C    
Sbjct: 176 MDAYIA-PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDM 234

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           + +A  LL        +P R +Y  LI  L
Sbjct: 235 LQEATELLKDAIFKGFVPDRVTYCSLINGL 264



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 6/256 (2%)

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G  P    Y A+MD        ++A ++    +  GV P+  T       +C  G P   
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + LL+ + +R C    ++Y T++ GL   G    A  +F EM+R     D    N++L  
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC K     D++E    +  K+ K+    +  T  I IR L +G + +EA + L  +++ 
Sbjct: 125 LCQKG----DIMESG-ALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEA-VALVESMDA 178

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
              P  +T+N +++ LC + K+ +A   L  M     IP   +Y+ +I    + +   +A
Sbjct: 179 YIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEA 238

Query: 460 CALYGAALKQGVIPQR 475
             L   A+ +G +P R
Sbjct: 239 TELLKDAIFKGFVPDR 254



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 8/239 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA   KE  + F+ +   G   +   +N L+     +N+ E A       S  GL P++ 
Sbjct: 406 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTI 465

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F+ +I  +C   D   A  +   + + GY     TF IL+ +      ++ A ++  +M
Sbjct: 466 SFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM 525

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP++ TY  L+ G C    V+ AY  L  + + G  P + T+  V++      R 
Sbjct: 526 ISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRV 585

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           +EA+ +++  +  GV P VV  +T+ +   KE    K + + +LMKK +     ISY T
Sbjct: 586 SEAVAIIHIMVRMGVVPEVV--DTILSTDKKEIAAPK-ILVEELMKKGH-----ISYPT 636


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 202/412 (49%), Gaps = 6/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+    +FD +  +G   +V  +  L+       E   A + + E +  G++PN++
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTY 496

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C+ N   EA K+   M +    PN  T+ +L+   CK G    A E+LD+M
Sbjct: 497 TFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEM 556

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TY  L+ GLC  GRV EA E + +++ +  K +   ++A++ G+CK GR 
Sbjct: 557 VEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRL 616

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A++   E + RGV  ++V ++ L  G  ++      + LLK M  +   PD + Y+T+
Sbjct: 617 DDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTM 676

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++   K G ++ A  ++  MV  G   +     +L+ GLC     +  L++ A  +  +M
Sbjct: 677 IDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLC-----KIGLMDKAELLCREM 731

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
               S+ +  TY   +  L      ++A I LH  +  G +  T+T+N +I+  C  G+I
Sbjct: 732 LASNSLPNQNTYACFLDYLTSEGNIEKA-IQLHDVLLEGFLANTVTYNILIRGFCKLGRI 790

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +A  +L  M +    P   SY  +I +  +     +A  L+ + L +GV P
Sbjct: 791 QEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 842



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 191/420 (45%), Gaps = 6/420 (1%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFND 90
           F A      E ++    P        VD + K   +    D+ + +KK G   S+  +N 
Sbjct: 301 FEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNA 360

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+ ++    + + A   F+     GL PN  T+SI+I  +C +     A   +  M + G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
               V  ++ L++  CK G+L+ A  + D+M   G KPN+  Y  L+ G C  G +  A+
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +   G+ P+ YT+TA++ G C   R  EA +L  E +E  V PN VT+N L  G+
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CKEG  ++   LL  M ++  +PD  +Y  L++GL   G++  A     ++     +++E
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              ++LL G C     ++  L+DA     +M  +    D   Y ++I  + + +     +
Sbjct: 601 MCFSALLHGYC-----KEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSII 655

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             L    + G  P  + +  +I A    G +  A  L  +M     +P+  +Y  LI  L
Sbjct: 656 DLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGL 715



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 190/401 (47%), Gaps = 40/401 (9%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +   + +L  L+ + +   A+  F E  S GL P+ + ++ ++R  C   DF  AR+VI 
Sbjct: 180 IRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIG 239

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV- 203
            M  +G   +V T+ + +  LCK+ R+ EA+E+ + +   G + ++ TY  L+ GLC V 
Sbjct: 240 RMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVE 299

Query: 204 ----------------------------------GRVEEAYEMLMNVKNDGLKPDVYTYT 229
                                             G +  A++++  VK  G+ P ++ Y 
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           A+++  CK G+ +EA  L N    +G+ PN VT++ L + +CK G     +  L  M + 
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
                   YS+L++G  K GK+R A S+F EM+  G + +  +  SL+ G C     ++ 
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC-----KEG 474

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            L +A++++ +MT K    +  T+  +I  L    +  EA       +E   IP  +T+N
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            +I+  C EG   +A  LL  M E   +P   +Y  LI+ L
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 172/358 (48%), Gaps = 5/358 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E ++I + +   G    V  +  L++ L  + E E   +  +E   +G  P+    S ++
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                K +   A  +++ +   G  P++  +  L+NS+CK G+L EA  + + MG  G  
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  TY+ L+   C  G+++ A   L  +   G+K  VY Y++++ G CK+G+   A  L
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E I  G+ PNVV + +L +GYCKEG       L   M  +   P+  +++ L++GL  
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
             ++  A  +F EMV +    +E   N L+ G C +    +     A+++ ++M +K  V
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVR-----AFELLDEMVEKGLV 562

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            D  TY  +I  L    +  EA   ++           + F+ ++   C EG++D AL
Sbjct: 563 PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDAL 620



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 175/354 (49%), Gaps = 5/354 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   ++  G + SV+ +N  +  L        AV+  +  S  GL  +  T+  ++   
Sbjct: 236 EVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGL 295

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +F    ++++ M + G+ P+    + LV+ L K G +  A ++++++ + G  P++
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             YN L+  +C  G+++EA  +  N+ + GL P+  TY+ ++D FCK G+ + A+  L +
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             E G+   V  +++L +G+CK G       L   M      P+ + Y++L++G  K G+
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A  ++ EM   G   +     +L+ GLC       + + +A ++F +M +   + + 
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLC-----HANRMAEANKLFGEMVEWNVIPNE 530

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            TY ++I    K   T  A   L   +E G +P T T+  +I  LC  G++ +A
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA 584



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 140/283 (49%), Gaps = 1/283 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L + +D    +   G    +  ++ L+  ++   ++ + +    +    GL P++ 
Sbjct: 612 KEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNV 671

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ MI       +   A  + D M   G  PNV T+T L+N LCK G + +A  +  +M
Sbjct: 672 LYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREM 731

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 PN  TY C L  L   G +E+A + L +V  +G   +  TY  ++ GFCK+GR 
Sbjct: 732 LASNSLPNQNTYACFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRI 790

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA E+L   I+ G++P+ ++++T+   YC+ G   + + L + M  R   PD ++Y+ L
Sbjct: 791 QEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFL 850

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           + G    G++  A  +  +M+R G + +    NSL+ G C+ S
Sbjct: 851 IYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMS 893



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 79/179 (44%)

Query: 28  KLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSD 87
           K+ +   A L   E L     P       F+D + +    E+      +  +G   +   
Sbjct: 717 KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVT 776

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+     L   + A +        G++P+  ++S +I  YC + D  EA K+ + M 
Sbjct: 777 YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESML 836

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
           + G +P+   +  L+   C +G L +A E+ D M R G KPN  TYN L+ G C +  V
Sbjct: 837 NRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSV 895


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 213/424 (50%), Gaps = 32/424 (7%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FD ++  G + SV  +  LL A +   +   A   F      G APN+ T+S ++   C 
Sbjct: 513 FDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCK 572

Query: 133 KNDFFEARKVIDCMF---DN--------GYH-----PNVTTFTILVNSLCKSGRLKEALE 176
             +  +A +V   M    DN        G H     PNV T+  L++ LCK+ ++ +A E
Sbjct: 573 AGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 632

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +LD M   GC+PN   Y+ L+ G C VG+++ A E+   +   G  P V+TYT+++D   
Sbjct: 633 LLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMF 692

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K  R + A+++L++ +E   TPNVVT+  + +G C+ G   K + LL +M+KR C P+ +
Sbjct: 693 KDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVV 752

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y++L++GL K GK+  ++ +F +M+  G   +      L+   C        LL++A+ 
Sbjct: 753 TYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAG-----LLDEAHS 807

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +  +M +         Y  V++  G  KK   +L  L      G +     +  +I +  
Sbjct: 808 LLSEMKQTYWPKYVQGYCSVVQ--GFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFS 865

Query: 417 GEGKIDKALLLLFLMYEHAK---IPSRTSYDMLITKL---DQLEKSYDACALYGAALKQG 470
             G+++KAL L   M E +    I S+ +Y  LI  L    QLEK+++   LY    ++G
Sbjct: 866 KAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFE---LYSEITRKG 922

Query: 471 VIPQ 474
           V+P+
Sbjct: 923 VVPE 926



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 209/509 (41%), Gaps = 87/509 (17%)

Query: 52  LQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA 111
           L  Q     ++AS   E I     ++ +    +V  +  LL   +   +     +  S  
Sbjct: 276 LCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMM 335

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS--- 168
            + G  PN   F+ ++  YCN  D+  A K+++ M   G  P    + I + S+C     
Sbjct: 336 MNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEEL 395

Query: 169 --------------------------------------GRLKEALEVLDQMGRIGCKPNI 190
                                                 G+  +A +++  M R G  P+ 
Sbjct: 396 PSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDT 455

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY+ ++  LC   +VE+A+ +   +K+ G+ PDVYTYT ++D FCKVG   +A    +E
Sbjct: 456 STYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDE 515

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G +P+VVT+  L + Y K     +   +   M    C P+ I+YS L++GL K G+
Sbjct: 516 MESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGE 575

Query: 311 IRPAVSIFKEMV--------RFGFEVDER--------MMNSLLRGLC--MKSWEEKDL-- 350
            + A  ++ +M+         F FE +             +L+ GLC   K  + ++L  
Sbjct: 576 SQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLD 635

Query: 351 --------------------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
                                     L++A +VF +M+K   +    TY  +I  + K +
Sbjct: 636 VMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDR 695

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + D A+  L   +E    P  +T+  +I  LC  G+  KAL LL +M +    P+  +Y 
Sbjct: 696 RLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYT 755

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            LI  L +  K   +  L+   + QG  P
Sbjct: 756 SLIDGLGKSGKVDMSLQLFTQMITQGCAP 784



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 163/332 (49%), Gaps = 10/332 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + +  ++ D +  +G   +   ++ L+     + + + A + F   S  G  P   
Sbjct: 623 KAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVH 682

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I           A KV+  M ++   PNV T+T +++ LC+ G  ++AL++L  M
Sbjct: 683 TYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMM 742

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC PN+ TY  L+ GL   G+V+ + ++   +   G  P+  TY  +++  C  G  
Sbjct: 743 EKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLL 802

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA  LL+E  +      V  + ++  G+ K+   +  +GLL+ ++    +     Y  L
Sbjct: 803 DEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKF--IASLGLLEELESHGMVSIAPVYGLL 860

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVD---ERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           ++   K G++  A+ + KEM+     ++   +    SL++ LC+ S      LE A++++
Sbjct: 861 IDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQ-----LEKAFELY 915

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
            ++T+K  V +   +  +I+ L K  K +EAL
Sbjct: 916 SEITRKGVVPELSAFICLIKGLIKVNKWNEAL 947



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/396 (21%), Positives = 163/396 (41%), Gaps = 16/396 (4%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +K  G   S + +N L+  L    + +   +   E S  G   + +T     +  C +  
Sbjct: 198 LKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGR 257

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           + +A  +I+      +  +    T +++ L ++    EA+  L +M    C PN+ TY  
Sbjct: 258 WSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRT 314

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           LL G     ++     ++  + N+G  P+   + +++  +C       A +LLN     G
Sbjct: 315 LLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCG 374

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK-------RNCLPDKISYSTLLNGLLKW 308
             P  V +N      C  G  +    LL L +K        +C+ +K++ +     L   
Sbjct: 375 CPPGYVVYNIFIGSICS-GEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGM 433

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           GK   A  I K M+R GF  D    + ++  LC     E   +E A+ +F++M     + 
Sbjct: 434 GKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLC-----EAMKVEKAFLLFQEMKSVGVIP 488

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  TY I+I +  K    ++A         +G  P  +T+  ++ A     ++ +A  + 
Sbjct: 489 DVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIF 548

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
             M +    P+  +Y  L+  L +  +S  AC +Y 
Sbjct: 549 HRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYA 584



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 140/321 (43%), Gaps = 16/321 (4%)

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           ++V   C+ G   +ALE L ++   G +P+  TYN L++ L   G+++  + +   +   
Sbjct: 177 VIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSEL 236

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-GVTPNVVTFNTLFNGYCKEGTPMK 278
           G   D +T        CK GR ++A+ +    IER     + V    + +G  +     +
Sbjct: 237 GFCTDKFTVGCFAQALCKEGRWSDALVM----IEREDFKLDTVLCTQMISGLMEASLFDE 292

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            +  L  M+  +C+P+ ++Y TLL G LK  ++     I   M+  G   +  + NSL+ 
Sbjct: 293 AISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVH 352

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA-LIHLHHAI 397
             C      +D    AY++  +M           Y I I ++  G++     L+ L   +
Sbjct: 353 SYC----NARD-YPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKV 407

Query: 398 EMGHIPRTITFN-----NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
               +  +   N     N  + LCG GK DKA  ++ LM     +P  ++Y  +IT L +
Sbjct: 408 YEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCE 467

Query: 453 LEKSYDACALYGAALKQGVIP 473
             K   A  L+      GVIP
Sbjct: 468 AMKVEKAFLLFQEMKSVGVIP 488



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 103/226 (45%), Gaps = 36/226 (15%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           ++ + +   ++K G N +V  +  L+  L    + + +++ F++  + G APN  T+ ++
Sbjct: 733 QKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVL 792

Query: 127 IRCYCNKNDFFEARKVIDCM-------FDNGYHPNVTTFT-------------------- 159
           I   C      EA  ++  M       +  GY   V  F+                    
Sbjct: 793 INHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVS 852

Query: 160 ------ILVNSLCKSGRLKEALEVLDQMGRIGCKPNI---QTYNCLLKGLCYVGRVEEAY 210
                 +L++S  K+GRL++ALE+  +M  +    NI    TY  L++ LC   ++E+A+
Sbjct: 853 IAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAF 912

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           E+   +   G+ P++  +  ++ G  KV + NEA++L     + GV
Sbjct: 913 ELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 10/186 (5%)

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
            N +    C+ G   K +  L  +K     P   +Y+ L+  L   G++     + KEM 
Sbjct: 175 LNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMS 234

Query: 323 RFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
             GF  D+  +    + LC +  W       DA  + E+   K+   D      +I  L 
Sbjct: 235 ELGFCTDKFTVGCFAQALCKEGRW------SDALVMIEREDFKL---DTVLCTQMISGLM 285

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           +    DEA+  LH       IP  +T+  ++     + ++     ++ +M      P+ +
Sbjct: 286 EASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPS 345

Query: 442 SYDMLI 447
            ++ L+
Sbjct: 346 LFNSLV 351


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 184/358 (51%), Gaps = 5/358 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +    + + G    +  +  ++  +      E A +  S   SYGL PN   ++ +++  
Sbjct: 252 EALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGI 311

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C+ + + +A +++  M+      +  TF ILV+  C++G +   +E+L+QM   GC P++
Sbjct: 312 CSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDV 371

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  ++ G C  G ++EA  +L N+ + G KP+  +YT V+ G C   R  +A EL++ 
Sbjct: 372 ITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSR 431

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            I++G  PN VTFNT+ N  CK+G   + + LLK M    C PD ISYST+++GL K GK
Sbjct: 432 MIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGK 491

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
              A+ +   M+  G   +    +S+   L       +  ++   Q+F+ +      +D 
Sbjct: 492 TEEALELLNVMINKGITPNVITYSSMAFAL-----AREGRIDKVIQMFDNIQDATIRSDA 546

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             Y  VI +L K ++TD A+  L + +  G +P   T+  +I+ L  EG + +A  LL
Sbjct: 547 VLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLL 604



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 205/413 (49%), Gaps = 17/413 (4%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + +++   G+     + N ++ A+      +  ++   +   +G   +  +++ +++  C
Sbjct: 173 VLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLC 232

Query: 132 NKNDFFEARKVIDCMF----------DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
               + +  +++D M            +G  P++  +  +++ +CK G  + A E+L +M
Sbjct: 233 AAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRM 292

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KPN+  YN +LKG+C   R E+A E+L  +       D  T+  ++D FC+ G  
Sbjct: 293 PSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLV 352

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +  +ELL + +E G  P+V+T+ T+ NG+CKEG   + V LLK M    C P+ ISY+ +
Sbjct: 353 DRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIV 412

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L GL    +   A  +   M++ G   +    N+++  LC     +K L+E A ++ ++M
Sbjct: 413 LKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLC-----KKGLVEQAIELLKQM 467

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  D  +Y  VI  LGK  KT+EAL  L+  I  G  P  IT++++  AL  EG+I
Sbjct: 468 LVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRI 527

Query: 422 DKALLLLFLMYEHAKIPSRTS-YDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           DK ++ +F   + A I S    Y+ +I+ L +  ++  A       +  G +P
Sbjct: 528 DK-VIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMP 579



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/448 (22%), Positives = 201/448 (44%), Gaps = 53/448 (11%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D   ++   G    V D+N ++     + + E A +    A++  + PN++T+  ++R  
Sbjct: 70  DAVRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRL---AAAVPVPPNAYTYFPVVRGL 126

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +    +A  V+D M      P    + +++ S C+SG    AL VL+ +   G   + 
Sbjct: 127 CGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDT 186

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
              N ++  +C  G V+E  EML  +   G + D+ +Y AV+ G C   R  +  EL++E
Sbjct: 187 GNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDE 246

Query: 251 AI----------ERGVTPNVVTFNTLFNGYCKEG-------------------------T 275
            +          + G TP++  + T+ +G CKEG                         T
Sbjct: 247 MVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNT 306

Query: 276 PMKGVG----------LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
            +KG+           LL  M ++NC  D ++++ L++   + G +   + + ++M+  G
Sbjct: 307 VLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 366

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              D     +++ G C     ++ L+++A  + + M       +  +Y IV++ L   ++
Sbjct: 367 CMPDVITYTTVINGFC-----KEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTER 421

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             +A   +   I+ G +P  +TFN +I  LC +G +++A+ LL  M  +   P   SY  
Sbjct: 422 WVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYST 481

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           +I  L +  K+ +A  L    + +G+ P
Sbjct: 482 VIDGLGKAGKTEEALELLNVMINKGITP 509



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 133/265 (50%), Gaps = 8/265 (3%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            VDR+        I++ + + + G    V  +  ++         + AV       S G 
Sbjct: 351 LVDRV--------IELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGC 402

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            PN+ +++I+++  C+   + +A +++  M   G  PN  TF  ++N LCK G +++A+E
Sbjct: 403 KPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIE 462

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +L QM   GC P++ +Y+ ++ GL   G+ EEA E+L  + N G+ P+V TY+++     
Sbjct: 463 LLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALA 522

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + GR ++ +++ +   +  +  + V +N + +  CK       +  L  M    C+P++ 
Sbjct: 523 REGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNES 582

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEM 321
           +Y+ L+ GL   G +  A  +  E+
Sbjct: 583 TYTALIKGLASEGLLCEAQDLLSEL 607



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 11/281 (3%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
            + L+ SLC +GR  +A+  LD  G       +  YN ++ G C VG+VE A  +   V 
Sbjct: 55  LSALIRSLCVAGRTADAVRALDAAGNAA---GVVDYNAMVAGYCRVGQVEAARRLAAAVP 111

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
              + P+ YTY  V+ G C  GR  +A+ +L+E   R   P    ++ +    C+ G   
Sbjct: 112 ---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYS 168

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
             + +L+ +  +    D  + + ++N +   G +   + + +++  FG E D    N++L
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVL 228

Query: 338 RGLC-MKSWEEKDLLED----AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
           +GLC  K W + + L D     ++   +M +     D   Y  +I  + K    + A   
Sbjct: 229 KGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
           L      G  P  + +N V++ +C   + +KA  LL  MY+
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQ 329



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 107/224 (47%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +  ++   G   +   +  +L  L        A +  S     G  PN  TF+ 
Sbjct: 387 IDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNT 446

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C K    +A +++  M  NG +P++ +++ +++ L K+G+ +EALE+L+ M   G
Sbjct: 447 IINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKG 506

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ TY+ +   L   GR+++  +M  N+++  ++ D   Y AV+   CK   ++ A+
Sbjct: 507 ITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAI 566

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           + L   +  G  PN  T+  L  G   EG   +   LL  +  R
Sbjct: 567 DFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 180/367 (49%), Gaps = 5/367 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ DF  +L ++  +    T +    +  S+G+  N +T +++I  +C+ N    A  V+
Sbjct: 73  SIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVL 132

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   G  P+  +FT L+  LC  G++ EAL + D+M   G +P++  Y  L+ GLC  
Sbjct: 133 AKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKT 192

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G    A  +L +++    +PDV  Y  ++   CK  +  +A  L +E I +G++PN+VT 
Sbjct: 193 GHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTC 252

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L    C  G       LL  M     +P+ IS +T+++ L K G +  A  +   M +
Sbjct: 253 NSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQ 312

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E D     +L+ G C++S      +++A +VF+ M  K    +  +Y  +I    K 
Sbjct: 313 SGVEPDVVTYTALIDGHCLRSE-----MDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKI 367

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           ++ D+A+           IP T+T+N +I  LC  G++  A+ L   M    +IP   +Y
Sbjct: 368 ERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTY 427

Query: 444 DMLITKL 450
            +L+  L
Sbjct: 428 RILLDYL 434



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 185/394 (46%), Gaps = 5/394 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   +V   N L+ +   LN    A    ++    G  P++ +F+ +I+  C +    EA
Sbjct: 104 GIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEA 163

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             + D M   G+ P+V  +  L+N LCK+G    A+ +L  M +  C+P++  Y  L+  
Sbjct: 164 LHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHS 223

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC   +  +A+ +   +   G+ P++ T  +++   C +G       LLNE ++  + PN
Sbjct: 224 LCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPN 283

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            ++  T+ +  CKEG   +   ++ +M +    PD ++Y+ L++G     ++  AV +F 
Sbjct: 284 AISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFD 343

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            MV  G   +    N+L+ G C     + + ++ A  +FE+M ++  + +  TY  +I  
Sbjct: 344 MMVHKGCAPNVFSYNTLINGYC-----KIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHG 398

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           L    +  +A+      +  G IP  +T+  ++  LC    +DKA+ LL  +      P 
Sbjct: 399 LCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPD 458

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              Y ++I  + +  +  DA  L+     +G+ P
Sbjct: 459 IQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKP 492



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 179/359 (49%), Gaps = 5/359 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +  S++K      V  +  L+ +L    +Q  A   FSE  + G++PN  T + ++  
Sbjct: 199 IRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYA 258

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            CN  ++     +++ M D+   PN  + T +V++LCK G + +A +V+D M + G +P+
Sbjct: 259 LCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPD 318

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY  L+ G C    ++EA ++   + + G  P+V++Y  +++G+CK+ R ++AM L  
Sbjct: 319 VVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFE 378

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E   + + PN VT+NTL +G C  G     + L + M     +PD ++Y  LL+ L K  
Sbjct: 379 EMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNC 438

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +  A+++ K +     + D ++   ++ G+C ++ E    LEDA  +F  ++ K    +
Sbjct: 439 HLDKAMALLKAIEGSNLDPDIQIYTIVIDGMC-RAGE----LEDARDLFSNLSSKGLKPN 493

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             TY I+   L K    DEA        E        T+N + Q      +  +A+ LL
Sbjct: 494 VWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLL 552



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 176/370 (47%), Gaps = 5/370 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           +  ++F  +   G + ++   N L+ AL  L E +      +E     + PN+ + + ++
Sbjct: 232 QAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVV 291

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    +A  V+D MF +G  P+V T+T L++  C    + EA++V D M   GC 
Sbjct: 292 DALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCA 351

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN+ +YN L+ G C + R+++A  +   +    L P+  TY  ++ G C VGR  +A+ L
Sbjct: 352 PNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIAL 411

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E +  G  P++VT+  L +  CK     K + LLK ++  N  PD   Y+ +++G+ +
Sbjct: 412 FREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCR 471

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G++  A  +F  +   G + +    N +  GLC     ++ LL++A ++F +M +    
Sbjct: 472 AGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLC-----KRGLLDEATKLFMEMDENACS 526

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  TY  + +   +  +T  A+  L   +  G      T   ++  L  +G        
Sbjct: 527 ADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHK 586

Query: 428 LFLMYEHAKI 437
           L  M+ H +I
Sbjct: 587 LEDMFPHLRI 596



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 185/405 (45%), Gaps = 5/405 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +FD +  +G    V  +  L+  L        A++           P+   +  
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A  +   M   G  PN+ T   LV +LC  G  K    +L++M    
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  +   ++  LC  G V +A++++  +   G++PDV TYTA++DG C     +EA+
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAV 339

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +  + +G  PNV ++NTL NGYCK     K + L + M ++  +P+ ++Y+TL++GL
Sbjct: 340 KVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGL 399

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+++ A+++F+EMV  G   D      LL  LC         L+ A  + + +    
Sbjct: 400 CHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCH-----LDKAMALLKAIEGSN 454

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D   Y IVI  + +  + ++A     +    G  P   T+N +   LC  G +D+A 
Sbjct: 455 LDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEAT 514

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
            L   M E+A      +Y+ +     +  ++  A  L    L +G
Sbjct: 515 KLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARG 559



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 30/351 (8%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  F  ++ S+ K  R    L +  +M   G   N+ T N L+   C++ RV  A+ +
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +PD  ++T ++ G C  G+  EA+ L ++ I  G  P+VV + TL NG CK
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     + LL+ M+K NC PD + Y TL++ L K  +   A ++F EM+  G   +   
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 333 MNSLLRGLC-MKSWE-----------------------------EKDLLEDAYQVFEKMT 362
            NSL+  LC +  W+                             ++ ++  A+ V + M 
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +     D  TY  +I       + DEA+      +  G  P   ++N +I   C   ++D
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           KA+ L   M     IP+  +Y+ LI  L  + +  DA AL+   +  G IP
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIP 422



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 125/243 (51%), Gaps = 1/243 (0%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E + +FD +   G   +V  +N L+     +   + A+  F E     L PN+ T+
Sbjct: 333 SEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTY 392

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +I   C+     +A  +   M   G  P++ T+ IL++ LCK+  L +A+ +L  +  
Sbjct: 393 NTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEG 452

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P+IQ Y  ++ G+C  G +E+A ++  N+ + GLKP+V+TY  +  G CK G  +E
Sbjct: 453 SNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDE 512

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A +L  E  E   + +  T+NT+  G+ +     + + LL+ M  R    D +S +TLL 
Sbjct: 513 ATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCD-VSTTTLLV 571

Query: 304 GLL 306
           G+L
Sbjct: 572 GML 574



 Score = 38.5 bits (88), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 54/120 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L++  D+F ++   G   +V  +N +   L      + A K F E      + +  
Sbjct: 471 RAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGC 530

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ + + +   N+   A ++++ M   G+  +V+T T+LV  L   G  +     L+ M
Sbjct: 531 TYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDM 590


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 198/397 (49%), Gaps = 13/397 (3%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+  FN LL AL  +         + +    GL+PN +T +I+I C CN N   E    +
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   GY P+V T+T L+  LC   R+ EA  +  +M ++GC PN+ TY  L+KGLC  
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209

Query: 204 GRVEEAYEMLMNVKND------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
           G +  A ++   + N         KP++++Y  ++D  CK+G+  EA  L NE +++GV 
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+VVTF+ L +  CKEG  ++    L+ M  R  +PD  ++++L+ G    G +  A  +
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKEL 329

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F  M   G+E D      L+ G C K++     +E+A +++ +M +     D  T+ +++
Sbjct: 330 FLSMPSKGYEPDVISYTVLIYGYC-KTFN----VEEAMKLYNEMLRVGKWPDMKTFCVLL 384

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV-IQALCGEGKIDKALLLLFLMYEHAK 436
           + L    K  +A   L   ++   +P+ +   +V +  LC  G + +A+ L   +  +  
Sbjct: 385 KGLFLAGKVGDAK-KLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNM 443

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                S++ LI  L +  K   A  L+    ++G+ P
Sbjct: 444 KLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP 480



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 192/387 (49%), Gaps = 15/387 (3%)

Query: 57  FVDRIKASPLKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-- 110
           +   IK   ++ RI     +F  ++K G   +V  +  L+  L        A+K   E  
Sbjct: 164 YTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEML 223

Query: 111 --ASSYGL--APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
              S Y +   PN ++++I+I   C    + EA+++ + M D G  P+V TF+ L+++LC
Sbjct: 224 NGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLC 283

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K G + EA + L+ M   G  P++ T+  L++G C VG ++ A E+ +++ + G +PDV 
Sbjct: 284 KEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVI 343

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           +YT ++ G+CK     EAM+L NE +  G  P++ TF  L  G    G       L  ++
Sbjct: 344 SYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVV 403

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           K      +    S  L+GL K G +  A+ +F E+  +  ++D    N L+ GLC     
Sbjct: 404 KPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLC----- 458

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
           +   LE A+++FEK++++    D  TY I+I    K  + D A I      E G  P  +
Sbjct: 459 KARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLL 518

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYE 433
           T++ ++       K+++ + LL  M +
Sbjct: 519 TYSALLHGFYKNNKLEEVVKLLHKMIQ 545



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 165/343 (48%), Gaps = 6/343 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P        +D + K    KE   +F+ +   G    V  F+ L+  L        A KF
Sbjct: 235 PNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKF 294

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
                  G+ P+ +TF+ +I  +C   D   A+++   M   GY P+V ++T+L+   CK
Sbjct: 295 LETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCK 354

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +  ++EA+++ ++M R+G  P+++T+  LLKGL   G+V +A ++   VK   +  ++Y 
Sbjct: 355 TFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYI 414

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
            +  +DG CK G   EAMEL NE     +  ++ +FN L +G CK         L + + 
Sbjct: 415 CSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLS 474

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +    PD ++Y  ++NG  K G++  A  +F+ M   G   +    ++LL G     + +
Sbjct: 475 QEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHG-----FYK 529

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
            + LE+  ++  KM +K        Y IV   + K +K  E L
Sbjct: 530 NNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWL 572



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 71/145 (48%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++ F+E  SY +  +  +F+ +I   C       A ++ + +   G  P+V T+ I++N
Sbjct: 431 AMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMIN 490

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             CK+G++  A  +   M   GC PN+ TY+ LL G     ++EE  ++L  +    +  
Sbjct: 491 GFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSL 550

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELL 248
               YT V D   K  +  E +++L
Sbjct: 551 AASIYTIVEDMVSKDEKCREWLDIL 575


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 207/434 (47%), Gaps = 6/434 (1%)

Query: 41  ESLDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E +D    P  +     +D  +K   L+    + D + +DG   +V  +N LL  L    
Sbjct: 220 EMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAG 279

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
             +       E +SY + P+ +T+SI+        D      +       G      T +
Sbjct: 280 RMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCS 339

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           IL+N LCK G++ +A +VL+ +   G  P    YN L+ G C V  ++ A+ +   +K+ 
Sbjct: 340 ILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSR 399

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            ++PD  TY A+++G CK+    EA +L+ E  + GV P+V TFNTL + Y + G   K 
Sbjct: 400 HIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKC 459

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             +L  M+ +    + IS+ +++    K GKI  AV+I  +M+      + ++ NS++  
Sbjct: 460 FTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSII-- 517

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
               ++ E    E A+ + EKM          TY ++++ L K  + DEA   +++    
Sbjct: 518 ---DAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQ 574

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P  +++N +I A C +G  D+AL LL  M+++   P+  +Y  L++ L    + +D 
Sbjct: 575 GLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDM 634

Query: 460 CALYGAALKQGVIP 473
             LY   + + V P
Sbjct: 635 ECLYQHMVHKNVEP 648



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 170/332 (51%), Gaps = 9/332 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P++++++++I          +A KV D M D G  PN  T+  +++   K G L+    +
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
            DQM + G KPN+ TYN LL GLC  GR++E   ++  + +  + PD +TY+ + DG  +
Sbjct: 253 RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G S   + L  E++++GV     T + L NG CK+G   K   +L+++     +P    
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+TL+NG  +   ++ A SIF++M       D    N+L+ GLC     + +++ +A  +
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLC-----KMEMITEAEDL 427

Query: 358 FEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
             +M K  S  DP   T+  +I   G+  + ++    L    + G     I+F +V++A 
Sbjct: 428 VMEMEK--SGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAF 485

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           C  GKI +A+ +L  M     +P+   Y+ +I
Sbjct: 486 CKNGKIPEAVAILDDMIHKDVVPNAQVYNSII 517



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 178/386 (46%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++  L    +   A+K F E    G+APN  T++ MI  +    D     ++ D M 
Sbjct: 198 YNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQML 257

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G  PNV T+ +L++ LC++GR+ E   ++D+M      P+  TY+ L  GL   G   
Sbjct: 258 QDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSR 317

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
               +       G+    YT + +++G CK G+  +A ++L   +  G+ P    +NTL 
Sbjct: 318 TMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLI 377

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NGYC+         + + MK R+  PD I+Y+ L+NGL K   I  A  +  EM + G +
Sbjct: 378 NGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVD 437

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N+L+      ++     LE  + V   M  K   ++  ++G V++   K  K  
Sbjct: 438 PSVETFNTLI-----DAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA+  L   I    +P    +N++I A    G  ++A LL+  M       S  +Y++L+
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLL 552

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L +  +  +A  L      QG+ P
Sbjct: 553 KGLCKNSQIDEAEELIYNLTNQGLRP 578



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 157/346 (45%), Gaps = 12/346 (3%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+  + ++++    +     + R     +   G  P+   +   V +   +G L EAL +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 178 LDQMGRI--GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           L +MGR      P+  +YN ++ GL   G+  +A ++   + + G+ P+  TY  ++DG 
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
            K G       L ++ ++ G  PNVVT+N L +G C+ G   +   L+  M   + LPD 
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
            +YS L +GL + G  R  +S+F E ++ G  +     + LL GLC      K     A 
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAK-----AE 355

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQA 414
           QV E +     V     Y  +I    + +    A   +   ++  HI P  IT+N +I  
Sbjct: 356 QVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAF-SIFEQMKSRHIRPDHITYNALING 414

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT---KLDQLEKSY 457
           LC    I +A  L+  M +    PS  +++ LI    +  QLEK +
Sbjct: 415 LCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCF 460



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 4/268 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E  D+   ++K G + SV  FN L+ A     + E      S+    G+  N  +F  
Sbjct: 421 ITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS 480

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++ +C      EA  ++D M      PN   +  ++++  +SG  ++A  ++++M   G
Sbjct: 481 VVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSG 540

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              +I TYN LLKGLC   +++EA E++ N+ N GL+PDV +Y  ++   C  G ++ A+
Sbjct: 541 VSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRAL 600

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL E  +  + P + T++ L +     G       L + M  +N  P    Y T     
Sbjct: 601 ELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENE 660

Query: 306 LKWGKIRPAVS----IFKEMVRFGFEVD 329
            K   ++  +S     F +  R   E+D
Sbjct: 661 SKVASLKKEMSEKGIAFDDTERTNLELD 688



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 87/221 (39%), Gaps = 42/221 (19%)

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           R+ LP   S + LL  LL  G+     + F  +V  G   D    N  ++  C+ + +  
Sbjct: 117 RSPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQA-CVAAGD-- 173

Query: 349 DLLEDAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
             L++A  +  +M +      P   +Y +VI  L +  K  +AL      ++ G  P  I
Sbjct: 174 --LDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQI 231

Query: 407 TFNNVI-----------------------------------QALCGEGKIDKALLLLFLM 431
           T+N +I                                     LC  G++D+   L+  M
Sbjct: 232 TYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEM 291

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             ++ +P   +Y +L   L +   S    +L+G +LK+GVI
Sbjct: 292 TSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVI 332



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM--YEHAKIPSRTSYDMLITKLDQLE 454
           +  G  P T  +N  +QA    G +D+AL +L  M   E A  P   SY+++I  L +  
Sbjct: 150 VAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSG 209

Query: 455 KSYDACALYGAALKQGVIPQR 475
           K  DA  ++   + +GV P +
Sbjct: 210 KGSDALKVFDEMVDRGVAPNQ 230


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 183/379 (48%), Gaps = 5/379 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V DFN L   +  +    TA+      S  G+ PN  T +I+I C C  N       V+ 
Sbjct: 78  VKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLG 137

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            MF  G  P++ TFT +VN LC  G + +A+  +D +  +G + +  T   ++ GLC VG
Sbjct: 138 LMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVG 197

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A   L  ++      DV  Y AV+DG CK G   EA +L ++   +G+ P++ T+N
Sbjct: 198 HSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYN 257

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +G C      +   LL  M ++  +PD  +++ +    LK G I  A SIF  M   
Sbjct: 258 CLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHM 317

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G E D    +S++   CM      + ++DA +VF+ M +K  + +  TY  +I    + K
Sbjct: 318 GIEHDVVTYSSIIGVHCM-----LNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIK 372

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             ++A+  L   +  G  P  +T+N +I   C  GK   A  L F+M++H ++P   +  
Sbjct: 373 NMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCA 432

Query: 445 MLITKLDQLEKSYDACALY 463
           +++  L +     +A +L+
Sbjct: 433 IILDGLFKCHFHSEAMSLF 451



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 199/415 (47%), Gaps = 25/415 (6%)

Query: 53  QAQRFVDRIK----ASPLKERIDIFDSIKKDG----------------TNWSVSDFNDLL 92
           QA RFVD +K     S    R  I + + K G                 N  V+ +N ++
Sbjct: 166 QAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVV 225

Query: 93  MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
             L        A   FS+ +  G+ P+ +T++ +I   CN + + EA  ++  M   G  
Sbjct: 226 DGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIM 285

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P+V TF ++     K+G +  A  +   MG +G + ++ TY+ ++   C + ++++A E+
Sbjct: 286 PDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEV 345

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G  P++ TYT+++ G+C++   N+AM  L E +  G+ PN+VT+NTL  G+CK
Sbjct: 346 FDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCK 405

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G P+    L  +M K   LPD  + + +L+GL K      A+S+F+E+ +   ++D  +
Sbjct: 406 AGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIII 465

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            + +L G+C         L DA ++F  ++ K    D  TY I+I  L K    D+A   
Sbjct: 466 YSIILNGMC-----SSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDL 520

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           L    E G  P   T+N  +Q L    +I K+   L  M       + T+  +LI
Sbjct: 521 LMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLI 575



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 177/403 (43%), Gaps = 30/403 (7%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G   S+  F  ++  L +      A++F       G   + +T   +I   C      
Sbjct: 141 KIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSS 200

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
            A   +  M +   + +VT +  +V+ LCK G + EA ++  QM   G +P++ TYNCL+
Sbjct: 201 AALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLI 260

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            GLC   R +EA  +L N+   G+ PDV T+  +   F K G  + A  + +     G+ 
Sbjct: 261 HGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIE 320

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            +VVT++++   +C        + +  LM ++ CLP+ ++Y++L++G  +   +  A+  
Sbjct: 321 HDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYF 380

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLL------------------------ 351
             EMV  G + +    N+L+ G C   K    K+L                         
Sbjct: 381 LGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFK 440

Query: 352 ----EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
                +A  +F ++ K  S  D   Y I++  +    K ++AL    +    G     +T
Sbjct: 441 CHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVT 500

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +N +I  LC EG +D A  LL  M E+   P   +Y++ +  L
Sbjct: 501 YNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGL 543



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 116/238 (48%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +++FD + + G   ++  +  L+     +     A+ F  E  + GL PN  T++ 
Sbjct: 339 MKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNT 398

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C       A+++   M  +G  P++ T  I+++ L K     EA+ +  ++ ++ 
Sbjct: 399 LIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMN 458

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              +I  Y+ +L G+C  G++ +A E+   + + G+K DV TY  +++G CK G  ++A 
Sbjct: 459 SDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAE 518

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           +LL +  E G  P+  T+N    G  +     K    L  MK +    +  +   L+N
Sbjct: 519 DLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLIN 576



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 1/158 (0%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           +L  L   +    A+  F E        +   +SI++   C+     +A ++   +   G
Sbjct: 434 ILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKG 493

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +V T+ I++N LCK G L +A ++L +M   GC P+  TYN  ++GL     + ++ 
Sbjct: 494 VKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKST 553

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           + LM +K  G + +  T T ++  +    + N A ++ 
Sbjct: 554 KYLMFMKGKGFRANA-TTTKLLINYFSANKENRAFQVF 590



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/242 (21%), Positives = 97/242 (40%), Gaps = 5/242 (2%)

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           +D    V   + A++  ++ +     P V  FN LF    K       + L+K M     
Sbjct: 50  LDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGV 109

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P+  +++ ++N L +        S+   M + G E       +++ GLC++       +
Sbjct: 110 KPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGN-----V 164

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
             A +  + +      +D  T G +I  L K   +  AL +L    E         +N V
Sbjct: 165 AQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAV 224

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           +  LC +G + +A  L   M      P   +Y+ LI  L   ++  +A  L    +++G+
Sbjct: 225 VDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGI 284

Query: 472 IP 473
           +P
Sbjct: 285 MP 286


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 193/391 (49%), Gaps = 9/391 (2%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           + +FN +L +LV LN   TA+ F  +     + P+ +TF+I+I C+C+      A  V+ 
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +F  G+HP+  T T L+  LC +G+++EAL   D +   G   +  +Y  L+ GLC  G
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A ++L  +    ++P+V  Y  ++D  CK      A +L +E I + + P+VVT+ 
Sbjct: 184 ETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYT 243

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL  G    G   + VGL   M  +N  PD  +++ L++GL K G+++ A ++   M++ 
Sbjct: 244 TLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQ 303

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G + +    NSL+ G  +   E K     A  VF  M ++    D  +Y I+I  L K K
Sbjct: 304 GVDSNIVTYNSLMDGYFLVKQENK-----ATFVFNTMARRGVTPDVQSYSIMINGLCKTK 358

Query: 385 KTDEA--LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
             DEA  L    H+  M   P T+T+N++I  L   G+I  A  L+  M+   +     +
Sbjct: 359 MVDEAVNLFKEMHSKSMA--PNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVIT 416

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           Y  L+  L +  +   A  L      QG+ P
Sbjct: 417 YSSLLDALCKNHQVDKAITLITKIKDQGIQP 447



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 194/411 (47%), Gaps = 17/411 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E +   D +   G +     +  L+  L    E   A++   +     + PN   ++ 
Sbjct: 150 VREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNT 209

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C       A  +   M      P+V T+T L+      GRLKEA+ + +QM    
Sbjct: 210 IIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKN 269

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KP++ T+N L+ GLC  G +++A  +L  +   G+  ++ TY ++MDG+  V + N+A 
Sbjct: 270 IKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKAT 329

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + N    RGVTP+V +++ + NG CK     + V L K M  ++  P+ ++Y++L++GL
Sbjct: 330 FVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGL 389

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
           LK+G+I  A  +  EM   G   D    +SLL  LC             +QV + +T   
Sbjct: 390 LKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKN-----------HQVDKAITLIT 438

Query: 366 SVTDPG------TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            + D G      TY I++  L K  +  +A       +  G+      +N ++  LC EG
Sbjct: 439 KIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEG 498

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
             D+AL L+  M ++  IP   +Y+ L+  L + +K+  A  L    + QG
Sbjct: 499 LFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 186/371 (50%), Gaps = 22/371 (5%)

Query: 47  ENPRSLQAQRFVDRIKASP-LKERIDIFDSIKKDGTNWSVSD----------------FN 89
           E   +LQ  R +D +   P +     I DS+ KD      SD                + 
Sbjct: 184 ETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYT 243

Query: 90  DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
            L+   +++   + AV  F++     + P+ +TF+I++   C + +  +AR V+  M   
Sbjct: 244 TLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQ 303

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G   N+ T+  L++      +  +A  V + M R G  P++Q+Y+ ++ GLC    V+EA
Sbjct: 304 GVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEA 363

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             +   + +  + P+  TY +++DG  K GR ++A +L+NE   RG   +V+T+++L + 
Sbjct: 364 VNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDA 423

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            CK     K + L+  +K +   P+  +Y+ L++GL K G+++ A +++++++  G+ +D
Sbjct: 424 LCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLD 483

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
            +M N ++ GLC     ++ L ++A  +  KM     + D  TY  ++R L +  K D+A
Sbjct: 484 VKMYNVMVNGLC-----KEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKA 538

Query: 390 LIHLHHAIEMG 400
           +  L   I  G
Sbjct: 539 VKLLREMIVQG 549



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 148/277 (53%), Gaps = 1/277 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K+  ++   + K G + ++  +N L+    ++ ++  A   F+  +  G+ P+  
Sbjct: 286 KEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQ 345

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++SIMI   C      EA  +   M      PN  T+  L++ L K GR+ +A +++++M
Sbjct: 346 SYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEM 405

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   ++ TY+ LL  LC   +V++A  ++  +K+ G++P++YTYT ++DG CK GR 
Sbjct: 406 HNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRL 465

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  +  + + +G   +V  +N + NG CKEG   + + L+  M+   C+PD ++Y TL
Sbjct: 466 KDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETL 525

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERM-MNSLL 337
           +  L +  K   AV + +EM+  G  V   +  NS+L
Sbjct: 526 VRALFENDKNDKAVKLLREMIVQGSAVGSNISSNSML 562


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 166/312 (53%), Gaps = 9/312 (2%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           A + ++++ ++   C      +A  +   M  +    P+V +++IL++  CK   L  A 
Sbjct: 118 ASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAE 177

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           ++  QM  + C PN+ TYN  L GL   GR+ +A  +   + + G  PDV TY+ ++ GF
Sbjct: 178 KLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGF 237

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
               + ++A EL    I RG  PN VT+N L +G CKE  P +   L + M +R C PDK
Sbjct: 238 SLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDK 297

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           ++Y+TLL G    GKI  AV +F EMV  G + D    N LL+G   ++ +  +    A 
Sbjct: 298 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGF-FRAGKPGE----AR 352

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH--IPRTITFNNVIQ 413
           Q+F+ M  +    D  ++ I+I  L K K+ D+A + +   +E  H   P  +T+N++I 
Sbjct: 353 QLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDA-VEVFERMEQDHGCSPDLVTYNSLIF 411

Query: 414 ALCGEGKIDKAL 425
            LCGE ++ +A+
Sbjct: 412 GLCGEQRLSEAM 423



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 167/321 (52%), Gaps = 7/321 (2%)

Query: 62  KASPLKERIDIFDS-IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           KA  + +   IF + + +      V  ++ L+     ++E   A K + +       PN 
Sbjct: 133 KAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 192

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++  +     K    +A+ V + M   G  P+V T++ L++    + +  +A E+ + 
Sbjct: 193 TTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEA 252

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC+PN  TYNCLL GLC   + +EA+E+   +   G  PD  TYT ++ GFC VG+
Sbjct: 253 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGK 312

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A+E+ +E + +G  P+VV +N L  G+ + G P +   L ++M  R C PD +S++ 
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNI 372

Query: 301 LLNGLLKWGKIRPAVSIFKEMVR-FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           +++GL K  ++  AV +F+ M +  G   D    NSL+ GLC    E++  L +A +VF+
Sbjct: 373 MIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLC---GEQR--LSEAMKVFK 427

Query: 360 KMTKKVSVTDPGTYGIVIRTL 380
           ++ +     DP  + +++  +
Sbjct: 428 EIDRLKLSPDPHAFNVLLEAM 448



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 169/345 (48%), Gaps = 8/345 (2%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T   +I+  C       A  +++ M   GY P++ T ++L+N LCK+ +++EA E L  M
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110

Query: 182 GR-IGCKP-NIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKV 238
            R I  +  +  +YN LL  LC   +V +A+ +    V    + PDV +Y+ ++DGFCK+
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
                A +L  + I+    PNV T+N   NG  ++G      G+ + M    C PD I+Y
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITY 230

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           STL++G     K   A  +F+ M+  G   +    N LL GLC +S       ++A+++F
Sbjct: 231 STLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKP-----DEAHELF 285

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            KM ++    D  TY  ++       K ++A+      +  GH P  + +N +++     
Sbjct: 286 RKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA 345

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           GK  +A  L  +M      P   S++++I  L + ++  DA  ++
Sbjct: 346 GKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVF 390



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 159/316 (50%), Gaps = 8/316 (2%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML--MNVKN 218
           ++  LCK+GR+  AL +L+ M + G  P++ T++ L+  LC   +++EA E L  MN   
Sbjct: 55  VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI-ERGVTPNVVTFNTLFNGYCKEGTPM 277
                  ++Y ++++  CK  + ++A  + +  + ER V P+VV+++ L +G+CK     
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   L K M   NC+P+  +Y+  LNGL++ G+I  A  +++EM+  G   D    ++L+
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            G  +    ++     A+++FE M  +    +  TY  ++  L K  K DEA       +
Sbjct: 235 HGFSLARKHDQ-----AHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
           E G  P  +T+  ++   C  GKI++A+ +   M      P   +Y+ L+    +  K  
Sbjct: 290 ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 349

Query: 458 DACALYGAALKQGVIP 473
           +A  L+   + +   P
Sbjct: 350 EARQLFQVMVSRECKP 365



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 148/327 (45%), Gaps = 13/327 (3%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ---TYNCLLKGLCYVGRVEEAY 210
           N   +T  +  LCKSG++++A E    M             T + +++ LC  GRV+ A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT---PNVVTFNTLF 267
            +L  +   G  PD+ T++ +++  CK  +  EA E L + + R ++    +  ++N+L 
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFL-QGMNRTISTRASSCFSYNSLL 128

Query: 268 NGYCKEGTPMKGVGLLKLM-KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
           N  CK     +   +   M  +R+ +PD +SYS L++G  K  ++  A  ++K+M+    
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             +    N+ L GL  K       + DA  V+E+M       D  TY  +I      +K 
Sbjct: 189 VPNVTTYNAFLNGLMRKGR-----IADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKH 243

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D+A       I  G  P  +T+N ++  LC E K D+A  L   M E    P + +Y  L
Sbjct: 244 DQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTL 303

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           +     + K   A  ++   + +G  P
Sbjct: 304 LYGFCNVGKIEQAVEVFDEMVSKGHDP 330



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 126/240 (52%), Gaps = 3/240 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +++ +   G +  V  ++ L+    +  + + A + F    S G  PN+ T++ ++   C
Sbjct: 214 VYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLC 273

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            ++   EA ++   M + G  P+  T+T L+   C  G++++A+EV D+M   G  P++ 
Sbjct: 274 KESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 333

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            YNCLLKG    G+  EA ++   + +   KPD  ++  ++DG  K  R ++A+E+  E 
Sbjct: 334 AYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVF-ER 392

Query: 252 IER--GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +E+  G +P++VT+N+L  G C E    + + + K + +    PD  +++ LL  +   G
Sbjct: 393 MEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 1/180 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S   E  ++F  + + G +     +  LL     + + E AV+ F E  S G  P+  
Sbjct: 274 KESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 333

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +++ +       EAR++   M      P+  +  I+++ L K+ RL +A+EV ++M
Sbjct: 334 AYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393

Query: 182 GR-IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            +  GC P++ TYN L+ GLC   R+ EA ++   +    L PD + +  +++     G 
Sbjct: 394 EQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 209/477 (43%), Gaps = 65/477 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+    + + +++ G + +V  +N L+  L      E A  +  E   YGL P+ +
Sbjct: 255 KVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGF 314

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I   C +    +A+ ++D M   G  PNV  ++ L++   + G   EA +++ +M
Sbjct: 315 TYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEM 374

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRV----------------------------------- 206
              G +PN  TY+ L++GLC +GR+                                   
Sbjct: 375 SAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNK 434

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           EEA+ +L  ++  G+ P+VYTY+ +++G C++G S  A  LL + I  G+ PN   +  L
Sbjct: 435 EEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPL 494

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +GYC+EG+       LK M + N  PD   Y++L+ GL   GK+  A+  + EM+  GF
Sbjct: 495 ISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGF 554

Query: 327 EVDERMMNSLLRGLCMKSWEEK------------------------------DLLEDAYQ 356
           + ++     L+ G  M    EK                              D LE    
Sbjct: 555 QPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSS 614

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
             + M +K  + D   YGIVI  L        A+  L    + G +P ++ + ++I   C
Sbjct: 615 TLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFC 674

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               ++KA+ LL  M +    P  + Y+ LI    + +    A  ++ + + +G+ P
Sbjct: 675 KAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPP 731



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 177/359 (49%), Gaps = 5/359 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GLAP+    + +++     +      KV   M   G  P+V T++ L+ + CK   L+ A
Sbjct: 203 GLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESA 262

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            +V+++M   GC  N+ TYN L+ GLC  G +EEA+     +++ GL PD +TY A+++G
Sbjct: 263 KKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIING 322

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK GR ++A  LL+E    G+ PNVV ++TL +G+ ++G   +   ++K M      P+
Sbjct: 323 LCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPN 382

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
           KI+Y  L+ GL K G++  A  I K+M + G+  D    N ++ G   +  +     E+A
Sbjct: 383 KITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNK-----EEA 437

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           + +  +M K     +  TY I+I  L +  +++ A   L   I  G  P    +  +I  
Sbjct: 438 FLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISG 497

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            C EG    A   L  M      P    Y+ LI  L  + K  +A   Y   L++G  P
Sbjct: 498 YCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQP 556



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 188/405 (46%), Gaps = 38/405 (9%)

Query: 105 VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
           V+ F E +  G++P+ +T+S +I  YC   D   A+KV++ M + G   NV T+  L+  
Sbjct: 230 VRGFMEGA--GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGG 287

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           LC++G ++EA     +M   G  P+  TY  ++ GLC  GR ++A  +L  +   GL P+
Sbjct: 288 LCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPN 347

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V  Y+ ++DGF + G ++EA +++ E    GV PN +T++ L  G CK G   +   +LK
Sbjct: 348 VVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            M K   + D ++Y+ ++ G L+      A  +  EM + G   +    + ++ GLC   
Sbjct: 408 QMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIG 467

Query: 345 WEEK--DLLED----------------------------AYQVFEKMTKKVSVTDPGTYG 374
             E+   LLE                             A +  +KMT++    D   Y 
Sbjct: 468 ESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYN 527

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            +I  L    K DEA+ +    +E G  P   T+  +I      G ++KA  LL  M   
Sbjct: 528 SLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNS 587

Query: 435 AKIPSRTSYDMLIT---KLDQLEKSYDACALYGAALKQGVIPQRK 476
              P+   Y  ++    K D LEK     +   + L++G++P  +
Sbjct: 588 GLNPNDFIYAQILEGYFKSDNLEK---VSSTLKSMLEKGLMPDNR 629



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 174/382 (45%), Gaps = 27/382 (7%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E I+ +D + + G   +   +  L+    M    E A +   +  + GL PN + ++ 
Sbjct: 539 MDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQ 598

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  Y   ++  +    +  M + G  P+   + I++++L  SG ++ A+ VL  + + G
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNG 658

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+   Y  L+ G C    +E+A  +L  +   G++P +  Y A++DGFCK    + A 
Sbjct: 659 LVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHAR 718

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + N  I +G+ PN VT+ TL +GYCK G     + L   M      PD   YS L  G 
Sbjct: 719 NIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGC 778

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G ++ A+ I +EM+  G+ +     N+L+ G C     ++  L++  +    M  K 
Sbjct: 779 SNSGDLQQALFITEEMIARGYAIISS-FNTLVHGFC-----KRGKLQETVKFLHVMMDKD 832

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEA---LIHLHHA-----------------IEMGHIPRT 405
            V    T   ++  LG+  K  EA    + L                    I  G +P  
Sbjct: 833 IVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLD 892

Query: 406 ITFNNVIQALCGEGKIDKALLL 427
           +  +N+IQ+ C +G +DKAL+L
Sbjct: 893 V-IHNMIQSHCKQGYLDKALML 913



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 164/375 (43%), Gaps = 5/375 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I   + K G       +N ++   +  + +E A    +E    G++PN +T+SI+I   C
Sbjct: 405 ILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLC 464

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +   A  +++ M  +G  PN   +  L++  C+ G    A E L +M R    P++ 
Sbjct: 465 QIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLY 524

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            YN L+ GL  VG+++EA E    +   G +P+ +TY  ++ G+   G   +A +LL++ 
Sbjct: 525 CYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM 584

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  G+ PN   +  +  GY K     K    LK M ++  +PD   Y  +++ L   G +
Sbjct: 585 LNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHM 644

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           + AVS+   + + G   D  +  SL+ G C  +  EK     A  + ++M KK       
Sbjct: 645 QAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEK-----AVGLLDEMAKKGIEPGIS 699

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            Y  +I    K      A    +  I  G  P  +T+  +I   C  G I  A+ L   M
Sbjct: 700 CYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEM 759

Query: 432 YEHAKIPSRTSYDML 446
                 P    Y +L
Sbjct: 760 LTEGVAPDAFVYSVL 774



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/427 (21%), Positives = 185/427 (43%), Gaps = 31/427 (7%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           +E   + + ++K G + +V  ++ ++  L  + E E A     +  + GL PN++ ++ +
Sbjct: 435 EEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPL 494

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I  YC +  F  A + +  M      P++  +  L+  L   G++ EA+E  D+M   G 
Sbjct: 495 ISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGF 554

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +PN  TY  L+ G    G +E+A ++L  + N GL P+ + Y  +++G+ K     +   
Sbjct: 555 QPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSS 614

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
            L   +E+G+ P+   +  + +     G     V +L +++K   +PD + Y +L++G  
Sbjct: 615 TLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFC 674

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC------------------------- 341
           K   +  AV +  EM + G E      N+L+ G C                         
Sbjct: 675 KAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCV 734

Query: 342 -----MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
                +  + +   + DA  ++ +M  +    D   Y ++           +AL      
Sbjct: 735 TYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEM 794

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           I  G+   + +FN ++   C  GK+ + +  L +M +   +PS  + + ++  L +  K 
Sbjct: 795 IARGYAIIS-SFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKL 853

Query: 457 YDACALY 463
            +A  ++
Sbjct: 854 SEAHTIF 860



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 159/336 (47%), Gaps = 42/336 (12%)

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  P V    +LV++  K+GR+++  EV+  M  +G  P+++  N LLK L     ++
Sbjct: 168 DQGRRPVV--LDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALD 225

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
             +++   ++  G+ PDVYTY+ +++ +CKV     A +++ E  E G + NVVT+NTL 
Sbjct: 226 LLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLI 285

Query: 268 -----------------------------------NGYCKEGTPMKGVGLLKLMKKRNCL 292
                                              NG CK G P +   LL  M     +
Sbjct: 286 GGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLM 345

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+ + YSTL++G ++ G    A  I KEM   G + ++   ++L+RGLC     +   + 
Sbjct: 346 PNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLC-----KLGRMG 400

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A ++ ++MTK   + D  TY +VI    +    +EA + L+   + G  P   T++ +I
Sbjct: 401 RASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIII 460

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
             LC  G+ ++A  LL  M      P+   Y  LI+
Sbjct: 461 NGLCQIGESERASGLLEQMIADGLKPNAFVYAPLIS 496



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 162/374 (43%), Gaps = 58/374 (15%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQM------------------------------- 181
           P    F  L  SLC +G   +A  +LDQM                               
Sbjct: 118 PAPDAFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVVLD 177

Query: 182 ---------GRI-------------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
                    GR+             G  P+++  N LLK L     ++  +++   ++  
Sbjct: 178 VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGA 237

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G+ PDVYTY+ +++ +CKV     A +++ E  E G + NVVT+NTL  G C+ G   + 
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
            G  K M+    +PD  +Y  ++NGL K G+   A  +  EM   G      M N ++  
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGL-----MPNVVVYS 352

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
             +  +  +   ++A+++ ++M+      +  TY  +IR L K  +   A   L    ++
Sbjct: 353 TLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKI 412

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G++  T+T+N VI+    +   ++A LLL  M +    P+  +Y ++I  L Q+ +S  A
Sbjct: 413 GYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERA 472

Query: 460 CALYGAALKQGVIP 473
             L    +  G+ P
Sbjct: 473 SGLLEQMIADGLKP 486



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 22/233 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA+ +++ + + D + K G    +S +N L+      ++   A   F+     GL PN  
Sbjct: 675 KAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCV 734

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  YC   D  +A  + + M   G  P+   +++L      SG L++AL + ++M
Sbjct: 735 TYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEM 794

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G    I ++N L+ G C  G+++E  + L  + +  + P + T   ++ G  + G+ 
Sbjct: 795 IARG-YAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKL 853

Query: 242 NEAM--------------------ELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
           +EA                      L  + I +G+ P  V  N +   +CK+G
Sbjct: 854 SEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHN-MIQSHCKQG 905



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 107/279 (38%), Gaps = 33/279 (11%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV------------------TFN 264
           PD + + AV    C  G   +A  LL++ I    TP +V                    +
Sbjct: 120 PDAFAHLAV--SLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVVLD 177

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L + Y K G    G  ++ LMK     P         NGLLK      A+ +  ++  F
Sbjct: 178 VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSL----RCCNGLLKDLLRADALDLLWKVRGF 233

Query: 325 ----GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
               G   D    ++L+   C    + +DL E A +V E+M +     +  TY  +I  L
Sbjct: 234 MEGAGISPDVYTYSTLIEAYC----KVRDL-ESAKKVVEEMRETGCSLNVVTYNTLIGGL 288

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            +    +EA  +     + G +P   T+  +I  LC  G+ D+A  LL  M     +P+ 
Sbjct: 289 CRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNV 348

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
             Y  LI    +   + +A  +       GV P +   D
Sbjct: 349 VVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYD 387


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 203/390 (52%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ DF+ LL+A+  L + E  +  F      G++ + ++FS +I C+C  +    A   +
Sbjct: 72  SIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCL 131

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G+ P++ TF  LVN  C   R++EA+ ++DQ+  +G +PN+  YN ++  LC  
Sbjct: 132 GKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEN 191

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            +V+ A ++L +++  G++PDV TY +++      G+   +  +L++ +  G+ P+V+TF
Sbjct: 192 RQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITF 251

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           + + + + KEG  ++       M +R+  P+ ++Y++L+NGL   G +  A  +   MV 
Sbjct: 252 SAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVS 311

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            GF  +    N+L+ G C     +   ++DA ++   M+      D  TY  + +   + 
Sbjct: 312 KGFFPNAVTYNTLVNGYC-----KSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQA 366

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + + A   L   +  G +P   TFN ++  LC  GKI+KAL+ L  + +   +    +Y
Sbjct: 367 GQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITY 426

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +++I  + +  K  DA  L+ +   +GV P
Sbjct: 427 NIIIKGMCKANKVEDAWYLFCSLALKGVSP 456



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 202/405 (49%), Gaps = 6/405 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +F  I+  G +  +  F+ L+      +    A+    +    G  P+  TF  ++  
Sbjct: 93  ISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNG 152

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C+ N   EA  ++D +   GY PNV  +  +++SLC++ ++  AL+VL+ M ++G +P+
Sbjct: 153 FCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPD 212

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TYN L+  L + G+   +  +L ++   G+ PDV T++A++D F K G+  EA +  +
Sbjct: 213 VITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYD 272

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E I+R V PN+VT+N+L NG C  G   +   +L  M  +   P+ ++Y+TL+NG  K  
Sbjct: 273 EMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSK 332

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A+ I   M   G + D    N+L +G C     +      A +V  +M     + D
Sbjct: 333 RVDDAMKILCVMSHDGVDGDTFTYNTLYQGYC-----QAGQFNAAEKVLARMVSCGVLPD 387

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             T+ +++  L +  K ++AL+ L    +   +   IT+N +I+ +C   K++ A  L  
Sbjct: 388 IYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFC 447

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK-QGVIP 473
            +      P   +Y  ++  L +     +A  LY    K  G++P
Sbjct: 448 SLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 161/308 (52%), Gaps = 5/308 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E + + D I   G   +V  +N ++ +L    + +TA+   +     G+ P+  T++ 
Sbjct: 159 IQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNS 218

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I    +   +  + +++  M   G HP+V TF+ +++   K G+L EA +  D+M +  
Sbjct: 219 LITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRS 278

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PNI TYN L+ GLC  G ++EA ++L  + + G  P+  TY  +++G+CK  R ++AM
Sbjct: 279 VDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAM 338

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++L      GV  +  T+NTL+ GYC+ G       +L  M     LPD  +++ LL+GL
Sbjct: 339 KILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGL 398

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + GKI  A+   +++ +    V     N +++G+C     + + +EDA+ +F  +  K 
Sbjct: 399 CEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMC-----KANKVEDAWYLFCSLALKG 453

Query: 366 SVTDPGTY 373
              D  TY
Sbjct: 454 VSPDVITY 461



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 113/231 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E    +D + +   + ++  +N L+  L +    + A K  +   S G  PN+ 
Sbjct: 260 KEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAV 319

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  YC      +A K++  M  +G   +  T+  L    C++G+   A +VL +M
Sbjct: 320 TYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARM 379

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+I T+N LL GLC  G++E+A   L +++       + TY  ++ G CK  + 
Sbjct: 380 VSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKV 439

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
            +A  L      +GV+P+V+T+ T+  G  ++   ++   L + MKK + L
Sbjct: 440 EDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGL 490



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 138/305 (45%), Gaps = 7/305 (2%)

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           S +  +AL +   M      P+I  ++ LL  +  + + E    +  +++  G+  D+Y+
Sbjct: 51  SIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYS 110

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           ++ ++D FC+  R + A+  L + ++ G  P++VTF +L NG+C      + + L+  + 
Sbjct: 111 FSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIV 170

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WE 346
                P+ + Y+T+++ L +  ++  A+ +   M + G   D    NSL+  L     W 
Sbjct: 171 GLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWG 230

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
                  + ++   M +     D  T+  +I   GK  +  EA       I+    P  +
Sbjct: 231 V------SARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIV 284

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           T+N++I  LC  G +D+A  +L  M      P+  +Y+ L+    + ++  DA  +    
Sbjct: 285 TYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVM 344

Query: 467 LKQGV 471
              GV
Sbjct: 345 SHDGV 349


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 216/435 (49%), Gaps = 35/435 (8%)

Query: 51  SLQAQRFV----DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           SLQA   V     R  ++  +  +D+F S+ +   + +   FN L+           A+ 
Sbjct: 170 SLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALA 229

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
             S    +GL+P++ T++ ++  +C K    EAR ++  M  +G  P   T+  LV++  
Sbjct: 230 TLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFA 289

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN-DGLKPDV 225
           + G +K+A +V++ M   G +P+++TYN L  GLC  G+V+EA+ +   ++      PDV
Sbjct: 290 RLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDV 349

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            TY  ++D   K   S++A+ LL E  ++GV P +VT N +    CKEG   + +G L+ 
Sbjct: 350 VTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEK 409

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKS 344
           + +    PD I+Y+TL++   K G +  A ++  EMV  G ++D   +N++L  LC MK 
Sbjct: 410 IAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKR 469

Query: 345 WEEKDLL-----------------------------EDAYQVFEKMTKKVSVTDPGTYGI 375
           +E+ + L                             E A +++++M ++  +    TY  
Sbjct: 470 YEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNT 529

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I+ L + ++  EA+  L+  +E G +P   T+N +I A C EG ++ A      M E++
Sbjct: 530 LIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENS 589

Query: 436 KIPSRTSYDMLITKL 450
             P   + + L+  L
Sbjct: 590 FKPDVVTCNTLMNGL 604



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 196/430 (45%), Gaps = 41/430 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   +   +K+DG   +   +N L+ A   L   + A K     ++YG  P+  T+++
Sbjct: 259 LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV 318

Query: 126 MIRCYCNKNDFFEARKVID--------------------------C----------MFDN 149
           +    C      EA ++ D                          C          M D 
Sbjct: 319 LAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G  P + T  I+V SLCK G+L+EAL  L+++   G  P++ TYN L+   C  G V +A
Sbjct: 379 GVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKA 438

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
           + ++  +   GLK D +T   V+   CK+ R  +A ELL+   +RG  P+ V++ T+   
Sbjct: 439 FTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAA 498

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           Y KE  P   + L   M +R  +P   +Y+TL+ GL +  +++ A+    E+V  G   D
Sbjct: 499 YFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPD 558

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
           E   N ++   C    +E D LE+A++   KM +     D  T   ++  L    K D+A
Sbjct: 559 ETTYNIIIHAYC----KEGD-LENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKA 613

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           L      +E G     IT+N +IQ++C  G +D AL     M      P   +Y+++++ 
Sbjct: 614 LKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673

Query: 450 LDQLEKSYDA 459
           L +  +S +A
Sbjct: 674 LSEAGRSEEA 683



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 192/410 (46%), Gaps = 45/410 (10%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQ--ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           ++ G   S+   N +L AL        + ++  F       L PN +TF++++  +C+K 
Sbjct: 163 RRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKG 222

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
              +A   +  M   G  P+  T+  L+N+ C+ G L EA  +L +M R G  P   TYN
Sbjct: 223 TLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYN 282

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR-------------- 240
            L+     +G +++A +++ ++   G +PD+ TY  +  G C+ G+              
Sbjct: 283 TLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERL 342

Query: 241 ----------------------SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
                                 S++A+ LL E  ++GV P +VT N +    CKEG   +
Sbjct: 343 STALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEE 402

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            +G L+ + +    PD I+Y+TL++   K G +  A ++  EMV  G ++D   +N++L 
Sbjct: 403 ALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLY 462

Query: 339 GLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            LC MK +      EDA ++     ++  V D  +YG V+    K    + AL      I
Sbjct: 463 NLCKMKRY------EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMI 516

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           E   IP   T+N +I+ LC   ++ +A+  L  + E   +P  T+Y+++I
Sbjct: 517 ERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIII 566



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 174/400 (43%), Gaps = 16/400 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E +   + I ++G    V  +N L+ A         A     E    GL  +++
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T + ++   C    + +A +++      G+ P+  ++  ++ +  K    + AL + DQM
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P+I TYN L+KGLC + R++EA + L  +   GL PD  TY  ++  +CK G  
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDL 575

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A    N+ +E    P+VVT NTL NG C  G   K + L +   ++    D I+Y+TL
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTL 635

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  + K G +  A+  F +M   G + D    N +L  L      E    E+A+ +  K+
Sbjct: 636 IQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSAL-----SEAGRSEEAHNMLHKL 690

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH------HAIEMGHIPRTITFNNVIQAL 415
                ++      ++     K    DEA +  H       + E        T+   +  L
Sbjct: 691 ADSGKLSQSFACPLL-----KPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGL 745

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
           C  G++ +A  +L  M +       ++Y  L+  L + +K
Sbjct: 746 CTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 11/249 (4%)

Query: 230 AVMDGFCKVGRSNEAMELLNE-AIERGVTPNVVTFNTLFNGYCKEGT--PMKGVGLLKLM 286
           A +  + ++   + A +LL+     RGV P++   N + +   +  +  P   + + + +
Sbjct: 140 AALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSL 199

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            +    P+  +++ L++     G +  A++    M  FG   D    N+LL   C     
Sbjct: 200 IELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHC----- 254

Query: 347 EKDLLEDAYQVFEKMTKK-VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            K +L +A  +  +M +  ++ T P TY  ++    +     +A   +      G  P  
Sbjct: 255 RKGMLGEARALLARMKRDGIAPTQP-TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDL 313

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYE-HAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            T+N +   LC  GK+D+A  L   M      +P   +Y+ L+    +   S DA  L  
Sbjct: 314 RTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLE 373

Query: 465 AALKQGVIP 473
               +GV P
Sbjct: 374 EMRDKGVKP 382


>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g09900-like [Glycine max]
          Length = 603

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 201/395 (50%), Gaps = 18/395 (4%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N L+       E E A++     S   ++PN   +  ++R  C++    +  +V+D    
Sbjct: 197 NVLIGGYCXSGEVEEALRVLDCMS---VSPNGINYDTILRSLCDRCKLKQGMEVLDRQLQ 253

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
              +P+V T+T L+++ CK  R+ +A+++L +M    CKPN+ TYN L+KG+C  GR++E
Sbjct: 254 IKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDE 313

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
               L N+ + G +PDV +YT V+      GR  +AM+LL   + +G + NVVTFNTL N
Sbjct: 314 VIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLIN 373

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
             C++G   K   +L+++ K  C P+ ISY+  + G              + MV  G   
Sbjct: 374 FLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFC-----NEKSXYLEIMVSRGCYP 428

Query: 329 DERMMNSLLRGLCMKSWEEKDL-LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           D    N LL  LC      KD  ++DA ++ ++++ K    D  TY I+I  L K  KTD
Sbjct: 429 DIVTYNILLAALC------KDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTD 482

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            AL  L  A   G  P  ITF +V+  +  +GK+ +A+ +   +      P+  +Y+++I
Sbjct: 483 LALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLII 542

Query: 448 TKLDQLEKSYDACALYGAA---LKQGVIPQRKPQD 479
             L + +++   C    A    L +G+  +  P++
Sbjct: 543 MGLCKTQQTSRGCKPTEATYNILVKGITSEGXPKE 577



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 184/392 (46%), Gaps = 23/392 (5%)

Query: 92  LMALVMLNEQETAVKFFSEASSYG-LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L  L+   E + A +F    ++ G + P     + +I  +C       A +++  + ++G
Sbjct: 120 LHVLIKNGELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATRIMGILEESG 179

Query: 151 YHPNVTTFT---------ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
              ++T +          +L+   C SG ++EAL VLD M      PN   Y+ +L+ LC
Sbjct: 180 AVIDITIYNFFCLPKKNNVLIGGYCXSGEVEEALRVLDCMS---VSPNGINYDTILRSLC 236

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
              ++++  E+L         PDV TYT ++D  CK  R  +AM+LL E + +   PNVV
Sbjct: 237 DRCKLKQGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVV 296

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+N L  G C EG   + +  LK +      PD ISY+ +L+ L   G+   A+ +   M
Sbjct: 297 TYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASM 356

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +  G  ++    N+L+  LC     +K LL  A+ V E + K V   +  +Y   I    
Sbjct: 357 LCKGCSLNVVTFNTLINFLC-----QKGLLGKAFNVLEMIXKHVCTPNSISYNPSI---- 407

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
            G   +E   +L   +  G  P  +T+N ++ ALC + K+D A+ +L  +      P   
Sbjct: 408 -GGFCNEKSXYLEIMVSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVI 466

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +Y ++I  L ++ K+  A  L   A  +G+ P
Sbjct: 467 TYSIIIDGLLKVGKTDLALELLEEACTKGLKP 498



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 175/383 (45%), Gaps = 24/383 (6%)

Query: 55  QRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY 114
           +   DR K   LK+ +++ D   +      V  + +L+ A    +    A+K   E  S 
Sbjct: 233 RSLCDRCK---LKQGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSK 289

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
              PN  T++ +I+  CN+    E  + +  +   GY P+V ++TI+++SL   GR  +A
Sbjct: 290 ECKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDA 349

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           +++L  M   GC  N+ T+N L+  LC  G + +A+ +L  +      P+  +Y   + G
Sbjct: 350 MKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGG 409

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           FC     NE    L   + RG  P++VT+N L    CK+      V +LK +  +   PD
Sbjct: 410 FC-----NEKSXYLEIMVSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPD 464

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            I+YS +++GLLK GK   A+ + +E    G + +     S++ G+       K  + +A
Sbjct: 465 VITYSIIIDGLLKVGKTDLALELLEEACTKGLKPNLITFTSVVGGI-----SRKGKVHEA 519

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++F  +       +   Y ++I  L K ++T             G  P   T+N +++ 
Sbjct: 520 IKIFHFLEGLGIRPNAFAYNLIIMGLCKTQQTSR-----------GCKPTEATYNILVKG 568

Query: 415 LCGEGKIDKALLLLFLMYEHAKI 437
           +  EG   +A  L   +Y    +
Sbjct: 569 ITSEGXPKEASKLWSELYSKGPV 591


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 193/389 (49%), Gaps = 5/389 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE  D+FD++   G N +V  +  +L               F      G+AP+ +
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 395

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+++I+ Y N     +A  + + M D+G  P+V T+  ++ +LC+ G++ +A+E  +QM
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+   Y+CL++G C  G + +A E++  + N+G+  D+  ++++++  CK+GR 
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  + +  +  G+ P  V ++ L +GYC  G   K + +   M      P+ + Y TL
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG  K G+I   +S+F+EM++ G +    + N ++ GL      E      A   F +M
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF-----EAGRTVPAKVKFHEM 630

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           T+     +  TY IV+R L K +  DEA+        M      IT N +I  +    ++
Sbjct: 631 TESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRV 690

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++A  L   +     +P   +Y ++IT L
Sbjct: 691 EEAKDLFASISRSGLVPCVVTYSIMITNL 719



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 181/369 (49%), Gaps = 8/369 (2%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           NW+   +N+L+       + + AV+ F E   + + P+  T S+++   C      EAR 
Sbjct: 289 NWT---YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V D M   G +PNV ++TI++N     G L +  ++ D M   G  P+I T+N L+K   
Sbjct: 346 VFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 405

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G +++A  +   +++ G+KPDV TY  V+   C++G+ ++AME  N+ I++GV P+  
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 465

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            ++ L  G+C  G+ +K   L+  +       D + +S+++N L K G++  A +IF   
Sbjct: 466 AYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLT 525

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           V  G      + + L+ G C+    EK     A +VF+ M       +   YG ++    
Sbjct: 526 VNVGLHPTAVVYSMLMDGYCLVGKMEK-----ALRVFDAMVSAGIEPNDVVYGTLVNGYC 580

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K  + DE L      ++ G  P TI +N +I  L   G+   A +    M E     ++ 
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 640

Query: 442 SYDMLITKL 450
           +Y++++  L
Sbjct: 641 TYNIVLRGL 649



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 206/437 (47%), Gaps = 30/437 (6%)

Query: 60  RIKASPLK--ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET-------AVKFFSE 110
           R++   L+  E  D+ D +++ GT     D N  L AL               AV  F+ 
Sbjct: 37  RVREGTLRPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNR 96

Query: 111 ASSYG-----LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           A+S       L+P S T++I++ C    +    A      +   G   N+     L+   
Sbjct: 97  AASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGF 156

Query: 166 CKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LK 222
           C++ R  EAL++L  +   +GC P++ +Y+ LLK LC  G+  +A ++L  +   G    
Sbjct: 157 CEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCS 216

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           PDV  Y+ V+DGF K G  N+A +L  E ++RG+ P+ VT++++ +  CK     K    
Sbjct: 217 PDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L+ M  +  LP+  +Y+ L+ G    G+ + AV +FKEM R     D   ++ L+  LC 
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLC- 335

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM--- 399
               +   +++A  VF+ M  K    +  +Y I++     G  T   L+ +    ++   
Sbjct: 336 ----KYGKIKEARDVFDTMAMKGQNPNVFSYTIML----NGYATKGCLVDMTDLFDLMLG 387

Query: 400 -GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G  P   TFN +I+A    G +DKA+++   M +H   P   +Y  +I  L ++ K  D
Sbjct: 388 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 447

Query: 459 ACALYGAALKQGVIPQR 475
           A   +   + QGV P +
Sbjct: 448 AMEKFNQMIDQGVAPDK 464



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 193/407 (47%), Gaps = 5/407 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE + +F  +++      V   + L+ +L    + + A   F   +  G  PN ++++IM
Sbjct: 306 KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIM 365

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  Y  K    +   + D M  +G  P++ TF +L+ +    G L +A+ + ++M   G 
Sbjct: 366 LNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 425

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           KP++ TY  ++  LC +G++++A E    + + G+ PD Y Y  ++ GFC  G   +A E
Sbjct: 426 KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKE 485

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L++E +  G+  ++V F+++ N  CK G  M    +  L       P  + YS L++G  
Sbjct: 486 LISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYC 545

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A+ +F  MV  G E ++ +  +L+ G C     +   +++   +F +M +K  
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC-----KIGRIDEGLSLFREMLQKGI 600

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                 Y I+I  L +  +T  A +  H   E G      T+N V++ L      D+A+ 
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIF 660

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L   +       +  + + +I  + Q  +  +A  L+ +  + G++P
Sbjct: 661 LFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 707



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 157/357 (43%), Gaps = 5/357 (1%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           +P+   +S +I  +  + D  +A  +   M   G  P+  T++ +V++LCK+  + +A  
Sbjct: 216 SPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEA 275

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
            L QM   G  PN  TYN L+ G    G+ +EA  +   ++   + PDV T + +M   C
Sbjct: 276 FLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLC 335

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G+  EA ++ +    +G  PNV ++  + NGY  +G  +    L  LM      PD  
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 395

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +++ L+      G +  A+ IF EM   G + D     +++  LC         ++DA +
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK-----MDDAME 450

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
            F +M  +    D   Y  +I+         +A   +   +  G     + F+++I  LC
Sbjct: 451 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             G++  A  +  L       P+   Y ML+     + K   A  ++ A +  G+ P
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 124/274 (45%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   I  +G +  +  F+ ++  L  L     A   F    + GL P +  +S+++  Y
Sbjct: 485 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGY 544

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A +V D M   G  PN   +  LVN  CK GR+ E L +  +M + G KP+ 
Sbjct: 545 CLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPST 604

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             YN ++ GL   GR   A      +   G+  +  TY  V+ G  K    +EA+ L  E
Sbjct: 605 ILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKE 664

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
                V  N++T NT+  G  +     +   L   + +   +P  ++YS ++  L+K G 
Sbjct: 665 LRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGL 724

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           +  A  +F  M   G E D R++N ++R L  K+
Sbjct: 725 VEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKN 758



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 94/214 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F  + + G   S   +N ++  L        A   F E +  G+A N  
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 640

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I++R       F EA  +   +       N+ T   ++  + ++ R++EA ++   +
Sbjct: 641 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASI 700

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  P + TY+ ++  L   G VEEA +M  +++N G +PD      V+    K    
Sbjct: 701 SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 760

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
             A   L++  ER  +   +T   L + +  +GT
Sbjct: 761 VRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGT 794



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/176 (21%), Positives = 73/176 (41%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           F  + + G   +   +N +L  L      + A+  F E  +  +  N  T + MI     
Sbjct: 627 FHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQ 686

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
                EA+ +   +  +G  P V T++I++ +L K G ++EA ++   M   GC+P+ + 
Sbjct: 687 TRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 746

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
            N +++ L     +  A   L  +       +  T   ++D F   G   E +  L
Sbjct: 747 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 194/367 (52%), Gaps = 6/367 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    ++ +++ D ++ +G   +   +N ++  +    + + A +  +   SYG  PN+ 
Sbjct: 199 KGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTV 258

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +++       + +  ++I  MF     P+  T +++++SLC+ G  + A+ +L++M
Sbjct: 259 NYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKM 318

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +  C  NI TYN ++ GLC  G V+ A  +L N++ DG KP+++TY  ++ G C   R 
Sbjct: 319 SKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERW 378

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A +L+ +  +    P+++TFNT+    C++G  M+ V + K M ++ C P+ ++YS++
Sbjct: 379 EDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSV 438

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL K GK+  ++ +  EM   GF  +   +N  L   C+    E+D L +A Q+  K+
Sbjct: 439 IEGLAKTGKMEQSLELLNEMGSKGFNPE---INYHLLAECLN---EEDKLVEAIQMVHKL 492

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                      Y  ++  L +  KTD+A+  L + +  G +P   T++ +IQ L  EG +
Sbjct: 493 QDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYM 552

Query: 422 DKALLLL 428
            +A  LL
Sbjct: 553 KEARELL 559



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 185/401 (46%), Gaps = 39/401 (9%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S   +N L+ AL +  +   A+         G AP+  T++I++   C    + +A ++I
Sbjct: 151 SAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELI 210

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M   G  P   T+ ++++ +C+ G +  A E+L+ +   GC PN   YN +LKGL   
Sbjct: 211 DLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTA 270

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           GR E+  E++  + ++   P   T + V+   C+ G    A+ LL +  +   T N+VT+
Sbjct: 271 GRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTY 330

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N + +G C++G     + LL  M+   C P+  +Y+ L+ GL    +   A  +  +M +
Sbjct: 331 NAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQ 390

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                D    N+++  LC     +K L   A +VF++M +K    +  TY  VI  L K 
Sbjct: 391 TDCLPDILTFNTIIGFLC-----QKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKT 445

Query: 384 KKTDEAL--------------IHLH-------------HAIEMGH-------IPRTITFN 409
            K +++L              I+ H              AI+M H        P+ + +N
Sbjct: 446 GKMEQSLELLNEMGSKGFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYN 505

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            ++  LC  GK D+A+ +L  M     +P  ++Y +LI  L
Sbjct: 506 TILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGL 546



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 180/358 (50%), Gaps = 8/358 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+++ ++ ++   C +    +A  ++D M   G  P+V T+ IL+ + CK    ++A+E+
Sbjct: 150 PSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMEL 209

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           +D M   GC P   TYN ++ G+C  G V+ A E+L ++ + G  P+   Y  V+ G   
Sbjct: 210 IDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRT 269

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            GR  +  EL+ E       P+  T + + +  C+EG   + + LL+ M K +C  + ++
Sbjct: 270 AGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVT 329

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQ 356
           Y+ +++GL + G +  A+ +   M   G + +    N L++GLC  + W      EDA  
Sbjct: 330 YNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERW------EDAED 383

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +  KM++   + D  T+  +I  L +   T +A+       E G  P ++T+++VI+ L 
Sbjct: 384 LMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLA 443

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             GK++++L LL  M      P   +Y +L   L++ +K  +A  +       G+ PQ
Sbjct: 444 KTGKMEQSLELLNEMGSKGFNP-EINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQ 500



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 176/382 (46%), Gaps = 14/382 (3%)

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           L +LV   E + A++      S    P+    + ++R  C +    +A +V++     G 
Sbjct: 63  LSSLVHRGELDAALRVVE---SSLCPPDVALANRLVRDLCRRGRPADAARVVEAC---GS 116

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
                T++ L +  C+ GRL EA  V+D M  +   P+   YN L+  LC  G+V +A  
Sbjct: 117 AATAVTYSALADGYCRVGRLDEARRVVDGMPVL---PSAYAYNPLMHALCVRGQVRDALV 173

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +L N+   G  PDV TY  +++  CK     +AMEL++     G TP  VT+N + +G C
Sbjct: 174 LLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMC 233

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           +EG       LL  +    C P+ ++Y+T+L GL   G+      +  EM        E 
Sbjct: 234 REGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEA 293

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
            ++ ++  LC     ++ L + A ++ EKM+K     +  TY  V+  L +    D AL 
Sbjct: 294 TLSVVISSLC-----QEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALY 348

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            L +    G  P   T+N +++ LC   + + A  L+  M +   +P   +++ +I  L 
Sbjct: 349 LLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLC 408

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           Q   +  A  ++    ++G  P
Sbjct: 409 QKGLTMQAVEVFKQMPEKGCCP 430



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 136/268 (50%), Gaps = 1/268 (0%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           +  I + + + K     ++  +N ++  L      + A+   S   + G  PN +T++I+
Sbjct: 309 QRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNIL 368

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++  CN   + +A  ++  M      P++ TF  ++  LC+ G   +A+EV  QM   GC
Sbjct: 369 VKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGC 428

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN  TY+ +++GL   G++E++ E+L  + + G  P++  Y  + +   +  +  EA++
Sbjct: 429 CPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEI-NYHLLAECLNEEDKLVEAIQ 487

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           ++++  + G++P  V +NT+  G C+ G   + + +L  M    C+PD+ +YS L+ GL 
Sbjct: 488 MVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLA 547

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMN 334
             G ++ A  +   +      VD  + N
Sbjct: 548 HEGYMKEARELLSTLSSRDVIVDNLIKN 575


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 188/405 (46%), Gaps = 69/405 (17%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N +L+ L      E A + F +      APN +TF+IMI   C + D  EAR ++  M  
Sbjct: 167 NHILLCLARERSSELAWRLFEQLP----APNVFTFNIMIDFLCKEGDLAEARALLARMKA 222

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G  P+V T+  L++   K G L+E  +++ +M   GC+P++ TYN L+   C  GR+E 
Sbjct: 223 IGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMER 282

Query: 209 AYEMLMNVKND-----------------------------------GLKPDVYTYTAVMD 233
           AY     +K +                                   G+KP+  TYT ++D
Sbjct: 283 AYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVD 342

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G CK GR ++A+ L NE +++GV  NVVT+  L +G CKEG   +   + +LM++     
Sbjct: 343 GTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRA 402

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--MKSWEEKDLL 351
           +++ Y+TL++G   +     A+S+  EM   G E+D  +  +L+ GLC   K  E K LL
Sbjct: 403 NELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLL 462

Query: 352 ----------------------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                                        +A  + +KM       +  TY  ++  L K 
Sbjct: 463 NKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKA 522

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
              DEA+ H +  +++G  P    +  ++  LC  G++DKA+LLL
Sbjct: 523 GSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLL 567



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 178/390 (45%), Gaps = 5/390 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           F  +K++G   +V  F+  + A         A+K F++    G+ PN  T++ ++   C 
Sbjct: 287 FAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCK 346

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
                +A  + + M   G   NV T+T+LV+ LCK G++ EA +V   M R G + N   
Sbjct: 347 AGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELL 406

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y  L+ G       E A  +L  +K+ G++ DV  Y A++ G C + + +EA  LLN+  
Sbjct: 407 YTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMD 466

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           E G+ PN V +  + +   K     + + LL+ M      P+ ++Y  L++GL K G I 
Sbjct: 467 ECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSID 526

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A+S F +MV  G E + +   +L+ GLC     +K +L     + E + K +S+ +   
Sbjct: 527 EAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVL----LLDEMIDKGMSLDNVVC 582

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
             ++   L +G   D A       I  G       +   +   C    I +A  +L  M 
Sbjct: 583 TSLMDGHLKQGNLQD-AFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMI 641

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           E+   P    Y+ LI K  +L    +A  L
Sbjct: 642 ENGITPDAVVYNCLINKCQKLGNMEEAAIL 671



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 166/366 (45%), Gaps = 5/366 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   +   ++  G    V  +N L+         E A  +F+E    G+  N  
Sbjct: 241 KCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVV 300

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS  +  +C      EA K+   M   G  PN  T+T LV+  CK+GRL +AL + ++M
Sbjct: 301 TFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEM 360

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G   N+ TY  L+ GLC  G+V EA ++   ++  G++ +   YT ++ G      S
Sbjct: 361 VQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNS 420

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+ LL+E  ++G+  +V  +  L  G C      +   LL  M +    P+ + Y+ +
Sbjct: 421 ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNI 480

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++   K  K   A+++ ++M+  GF  +     +L+ GLC     +   +++A   F KM
Sbjct: 481 MDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLC-----KAGSIDEAISHFNKM 535

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  +   Y  ++  L K  + D+A++ L   I+ G     +   +++     +G +
Sbjct: 536 VDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNL 595

Query: 422 DKALLL 427
             A  L
Sbjct: 596 QDAFAL 601



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 2/253 (0%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS-IMIR 128
           + +   +K  G    VS +  L+  L  L + + A    ++    GL PN+  ++ IM  
Sbjct: 424 LSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDA 483

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
           C+  + +  EA  ++  M D+G+ PN+ T+  LV+ LCK+G + EA+   ++M  +G +P
Sbjct: 484 CFKARKES-EAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEP 542

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N+Q Y  L+ GLC  GR+++A  +L  + + G+  D    T++MDG  K G   +A  L 
Sbjct: 543 NVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALK 602

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
            + I  G+  ++  +     G+C      +   +L  M +    PD + Y+ L+N   K 
Sbjct: 603 AKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKL 662

Query: 309 GKIRPAVSIFKEM 321
           G +  A  +  EM
Sbjct: 663 GNMEEAAILQNEM 675


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 188/418 (44%), Gaps = 40/418 (9%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + +D+F  + +      + DF+ L   +    + +  +    +    G+A N +T SIMI
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
            C C       A   +  +   GY P+  TF+ L+N LC  GR+ EALE++D+M  +G K
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 188 PNIQTYNCLLKGLCYVGRVEEAY-----------------------------------EM 212
           P + T N L+ GLC  G+V +A                                    E+
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  ++   +K D   Y+ ++DG CK G  + A  L NE   +G   +++ + TL  G+C 
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G    G  LL+ M KR   PD +++S L++  +K GK+R A  + KEM++ G   D   
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             SL+ G C     +++ L+ A  + + M  K    +  T+ I+I    K    D+ L  
Sbjct: 355 YTSLIDGFC-----KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                  G +  T+T+N +IQ  C  GK++ A  L   M      P   SY +L+  L
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 187/417 (44%), Gaps = 40/417 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E +++ D + + G   ++   N L+  L +  +   AV         G  PN  T+  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C       A +++  M +     +   ++I+++ LCK G L  A  + ++M   G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 186 CKPNIQTYNCLLKGLCYVGR-----------------------------------VEEAY 210
            K +I  Y  L++G CY GR                                   + EA 
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E+   +   G+ PD  TYT+++DGFCK  + ++A  +L+  + +G  PN+ TFN L NGY
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK      G+ L + M  R  + D ++Y+TL+ G  + GK+  A  +F+EMV      D 
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                LL GLC     EK     A ++FEK+ K     D G Y I+I  +    K D+A 
Sbjct: 458 VSYKILLDGLCDNGEPEK-----ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                    G  P   T+N +I  LC +G + +A LL   M E    P+  +Y++LI
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 170/380 (44%), Gaps = 29/380 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L    ++F+ ++  G    +  +  L+         +   K   +     + P+  
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            FS +I C+  +    EA ++   M   G  P+  T+T L++  CK  +L +A  +LD M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PNI+T+N L+ G C    +++  E+   +   G+  D  TY  ++ GFC++G+ 
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A EL  E + R V P++V++  L +G C  G P K + + + ++K     D   Y+ +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKDLLEDAYQVFEK 360
           ++G+    K+  A  +F  +   G + D +  N ++ GLC K S  E DLL      F K
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL------FRK 552

Query: 361 MTKKVSVTDPGTYGIVIRT-LGKGKKTDE---------------------ALIHLHHAIE 398
           M +     +  TY I+IR  LG+G  T                       AL  L   ++
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLK 612

Query: 399 MGHIPRTITFNNVIQALCGE 418
            GH P   TF  +++  C E
Sbjct: 613 AGHEPDVFTFTTLLRPFCLE 632



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 170/390 (43%), Gaps = 25/390 (6%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L+E  ++   + + G +     +  L+      N+ + A        S G  PN 
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+I+I  YC  N   +  ++   M   G   +  T+  L+   C+ G+L+ A E+  +
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M     +P+I +Y  LL GLC  G  E+A E+   ++   ++ D+  Y  ++ G C   +
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++A +L      +GV P+V T+N +  G CK+G+  +   L + M++    P+  +Y+ 
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVD-----------ERMM-----------NSLLR 338
           L+   L  G    +  + +E+ R GF VD            RM+            +LLR
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLR 627

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
             C+   EE   + DA  +F+ M       +  TY  VI+ L  G    +    L    E
Sbjct: 628 PFCL---EENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFE 684

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            G  P  +T +  I  LC +     A+LLL
Sbjct: 685 RGCQPNAVTKSTFISGLCKQDLHGSAILLL 714



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 24/245 (9%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++IF+ I+K      +  +N ++  +   ++ + A   F      G+ P+  T++IMI  
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS------LCKSGRLKE---------- 173
            C K    EA  +   M ++G+ PN  T+ IL+ +        KS +L E          
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596

Query: 174 ------ALEVLDQMGRIGCKPNIQTYNCLLKGLCYV--GRVEEAYEMLMNVKNDGLKPDV 225
                 AL  L +M + G +P++ T+  LL+  C      V +A  +  N+K  G KP+V
Sbjct: 597 ASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNV 656

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            TY  V+ G       ++   +L++  ERG  PN VT +T  +G CK+      + LL+ 
Sbjct: 657 VTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRK 716

Query: 286 MKKRN 290
           M+  N
Sbjct: 717 MENDN 721


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 201/429 (46%), Gaps = 43/429 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + +D+F  + +     S+ +FN LL A+  +N+ +  +       +  ++ + ++++I
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI- 184
           +I C+C ++    A  V+  M   GY P++ T + L+N  C   R+ EA+ ++DQM  + 
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 185 ----------------------------------GCKPNIQTYNCLLKGLCYVGRVEEAY 210
                                             GC+P++ TY  ++ GLC  G ++ A 
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L  ++   ++ DV  YT ++D  C     N+A+ L  E   +G+ PNVVT+N+L    
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C  G       LL  M +R   P+ +++S L++  +K GK+  A  ++ EM++   + D 
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              +SL+ G CM      D L++A  +FE M  K    +  TY  +I+   K K+ +E +
Sbjct: 361 FTYSSLINGFCM-----HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML---I 447
                  + G +  T+T+N +IQ L   G  D A  +   M      P   +Y +L   +
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475

Query: 448 TKLDQLEKS 456
            K  +LEK+
Sbjct: 476 CKYGKLEKA 484



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 211/442 (47%), Gaps = 15/442 (3%)

Query: 26  FNKLV--VFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDI------FDSIK 77
           FN L+  +F     S A +L  +   R  Q   F      + L +R DI         ++
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K      V  +  ++ AL        A+  F+E  + G+ PN  T++ +IRC CN   + 
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +A +++  M +   +PNV TF+ L+++  K G+L EA ++ D+M +    P+I TY+ L+
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G C   R++EA  M   + +    P+V TY  ++ GFCK  R  E MEL  E  +RG+ 
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            N VT+NTL  G  + G       + K M      PD I+YS LL+GL K+GK+  A+ +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F+ + +   E D    N ++ G+C     +   +ED + +F  ++ K    +   Y  +I
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMC-----KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               +    +EA        E G +P + T+N +I+A   +G    +  L+  M     +
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602

Query: 438 PSRTSYDMLITKLD--QLEKSY 457
              ++  M+I  L   +LEKSY
Sbjct: 603 GDASTISMVINMLHDGRLEKSY 624



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 196/386 (50%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+  L + N+   AV       + G  P+ +T+  ++   C + D   A  ++  M 
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                 +V  +T ++++LC    + +AL +  +M   G +PN+ TYN L++ LC  GR  
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +L ++    + P+V T++A++D F K G+  EA +L +E I+R + P++ T+++L 
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG+C      +   + +LM  ++C P+ ++Y+TL+ G  K  ++   + +F+EM + G  
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +    N+L++GL    ++  D  + A ++F+KM       D  TY I++  L K  K +
Sbjct: 428 GNTVTYNTLIQGL----FQAGD-CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +AL+   +  +    P   T+N +I+ +C  GK++    L   +      P+   Y  +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
           +   +     +A AL+    + G +P
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLP 568



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 174/362 (48%), Gaps = 8/362 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + +++F  +   G   +V  +N L+  L        A +  S+     + PN  TFS 
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +  +    EA K+ D M      P++ T++ L+N  C   RL EA  + + M    
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN+ TYN L+KG C   RVEE  E+   +   GL  +  TY  ++ G  + G  + A 
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++  + +  GV P+++T++ L +G CK G   K + + + ++K    PD  +Y+ ++ G+
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GK+     +F  +   G + +  +  +++ G C      K L E+A  +F +M +  
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC-----RKGLKEEADALFREMKEDG 565

Query: 366 SVTDPGTYGIVIRT-LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           ++ + GTY  +IR  L  G K   A + +      G +    T + VI  L  +G+++K+
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAEL-IKEMRSCGFVGDASTISMVINML-HDGRLEKS 623

Query: 425 LL 426
            L
Sbjct: 624 YL 625



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 156/321 (48%), Gaps = 5/321 (1%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           ++ AS   ++ ++ K NP  +     +D  +K   L E   ++D + K   +  +  ++ 
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    M +  + A   F    S    PN  T++ +I+ +C      E  ++   M   G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              N  T+  L+  L ++G    A ++  +M   G  P+I TY+ LL GLC  G++E+A 
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   ++   ++PD+YTY  +++G CK G+  +  +L      +GV PNV+ + T+ +G+
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C++G   +   L + MK+   LP+  +Y+TL+   L+ G    +  + KEM   GF  D 
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDA 605

Query: 331 R----MMNSLLRGLCMKSWEE 347
                ++N L  G   KS+ E
Sbjct: 606 STISMVINMLHDGRLEKSYLE 626



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 147/304 (48%), Gaps = 5/304 (1%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +L +A+++  +M +    P+I  +N LL  +  + + +    +   ++N  +  D+Y+Y 
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++ FC+  +   A+ +L + ++ G  P++VT ++L NGYC      + V L+  M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P+ ++++TL++GL    K   AV++   MV  G + D     +++ GLC +   + D
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG--DID 237

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
           L   A  + +KM K     D   Y  +I  L   K  ++AL         G  P  +T+N
Sbjct: 238 L---ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           ++I+ LC  G+   A  LL  M E    P+  ++  LI    +  K  +A  LY   +K+
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354

Query: 470 GVIP 473
            + P
Sbjct: 355 SIDP 358



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 2/118 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++  D+F S+   G   +V  +  ++        +E A   F E    G  PNS 
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL-KEALEVL 178
           T++ +IR      D   + ++I  M   G+  + +T ++++N L   GRL K  LE+L
Sbjct: 572 TYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSYLEML 628


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 201/429 (46%), Gaps = 43/429 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + +D+F  + +     S+ +FN LL A+  +N+ +  +       +  ++ + ++++I
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI- 184
           +I C+C ++    A  V+  M   GY P++ T + L+N  C   R+ EA+ ++DQM  + 
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 185 ----------------------------------GCKPNIQTYNCLLKGLCYVGRVEEAY 210
                                             GC+P++ TY  ++ GLC  G ++ A 
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L  ++   ++ DV  YT ++D  C     N+A+ L  E   +G+ PNVVT+N+L    
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C  G       LL  M +R   P+ +++S L++  +K GK+  A  ++ EM++   + D 
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              +SL+ G CM      D L++A  +FE M  K    +  TY  +I+   K K+ +E +
Sbjct: 345 FTYSSLINGFCM-----HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 399

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML---I 447
                  + G +  T+T+N +IQ L   G  D A  +   M      P   +Y +L   +
Sbjct: 400 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 459

Query: 448 TKLDQLEKS 456
            K  +LEK+
Sbjct: 460 CKYGKLEKA 468



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 211/442 (47%), Gaps = 15/442 (3%)

Query: 26  FNKLV--VFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDI------FDSIK 77
           FN L+  +F     S A +L  +   R  Q   F      + L +R DI         ++
Sbjct: 172 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 231

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K      V  +  ++ AL        A+  F+E  + G+ PN  T++ +IRC CN   + 
Sbjct: 232 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 291

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +A +++  M +   +PNV TF+ L+++  K G+L EA ++ D+M +    P+I TY+ L+
Sbjct: 292 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 351

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G C   R++EA  M   + +    P+V TY  ++ GFCK  R  E MEL  E  +RG+ 
Sbjct: 352 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 411

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            N VT+NTL  G  + G       + K M      PD I+YS LL+GL K+GK+  A+ +
Sbjct: 412 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 471

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F+ + +   E D    N ++ G+C     +   +ED + +F  ++ K    +   Y  +I
Sbjct: 472 FEYLQKSKMEPDIYTYNIMIEGMC-----KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 526

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               +    +EA        E G +P + T+N +I+A   +G    +  L+  M     +
Sbjct: 527 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 586

Query: 438 PSRTSYDMLITKLD--QLEKSY 457
              ++  M+I  L   +LEKSY
Sbjct: 587 GDASTISMVINMLHDGRLEKSY 608



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 196/386 (50%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+  L + N+   AV       + G  P+ +T+  ++   C + D   A  ++  M 
Sbjct: 172 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 231

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                 +V  +T ++++LC    + +AL +  +M   G +PN+ TYN L++ LC  GR  
Sbjct: 232 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 291

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +L ++    + P+V T++A++D F K G+  EA +L +E I+R + P++ T+++L 
Sbjct: 292 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 351

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG+C      +   + +LM  ++C P+ ++Y+TL+ G  K  ++   + +F+EM + G  
Sbjct: 352 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 411

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +    N+L++GL    ++  D  + A ++F+KM       D  TY I++  L K  K +
Sbjct: 412 GNTVTYNTLIQGL----FQAGD-CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 466

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +AL+   +  +    P   T+N +I+ +C  GK++    L   +      P+   Y  +I
Sbjct: 467 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 526

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
           +   +     +A AL+    + G +P
Sbjct: 527 SGFCRKGLKEEADALFREMKEDGTLP 552



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 174/362 (48%), Gaps = 8/362 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + +++F  +   G   +V  +N L+  L        A +  S+     + PN  TFS 
Sbjct: 255 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 314

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +  +    EA K+ D M      P++ T++ L+N  C   RL EA  + + M    
Sbjct: 315 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 374

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN+ TYN L+KG C   RVEE  E+   +   GL  +  TY  ++ G  + G  + A 
Sbjct: 375 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 434

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++  + +  GV P+++T++ L +G CK G   K + + + ++K    PD  +Y+ ++ G+
Sbjct: 435 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 494

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GK+     +F  +   G + +  +  +++ G C      K L E+A  +F +M +  
Sbjct: 495 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC-----RKGLKEEADALFREMKEDG 549

Query: 366 SVTDPGTYGIVIRT-LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           ++ + GTY  +IR  L  G K   A + +      G +    T + VI  L  +G+++K+
Sbjct: 550 TLPNSGTYNTLIRARLRDGDKAASAEL-IKEMRSCGFVGDASTISMVINML-HDGRLEKS 607

Query: 425 LL 426
            L
Sbjct: 608 YL 609



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 156/321 (48%), Gaps = 5/321 (1%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           ++ AS   ++ ++ K NP  +     +D  +K   L E   ++D + K   +  +  ++ 
Sbjct: 290 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 349

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    M +  + A   F    S    PN  T++ +I+ +C      E  ++   M   G
Sbjct: 350 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 409

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              N  T+  L+  L ++G    A ++  +M   G  P+I TY+ LL GLC  G++E+A 
Sbjct: 410 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 469

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   ++   ++PD+YTY  +++G CK G+  +  +L      +GV PNV+ + T+ +G+
Sbjct: 470 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 529

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C++G   +   L + MK+   LP+  +Y+TL+   L+ G    +  + KEM   GF  D 
Sbjct: 530 CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDA 589

Query: 331 R----MMNSLLRGLCMKSWEE 347
                ++N L  G   KS+ E
Sbjct: 590 STISMVINMLHDGRLEKSYLE 610



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 147/304 (48%), Gaps = 5/304 (1%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +L +A+++  +M +    P+I  +N LL  +  + + +    +   ++N  +  D+Y+Y 
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++ FC+  +   A+ +L + ++ G  P++VT ++L NGYC      + V L+  M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P+ ++++TL++GL    K   AV++   MV  G + D     +++ GLC +   + D
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG--DID 221

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
           L   A  + +KM K     D   Y  +I  L   K  ++AL         G  P  +T+N
Sbjct: 222 L---ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 278

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           ++I+ LC  G+   A  LL  M E    P+  ++  LI    +  K  +A  LY   +K+
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338

Query: 470 GVIP 473
            + P
Sbjct: 339 SIDP 342



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 2/118 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++  D+F S+   G   +V  +  ++        +E A   F E    G  PNS 
Sbjct: 496 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 555

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL-KEALEVL 178
           T++ +IR      D   + ++I  M   G+  + +T ++++N L   GRL K  LE+L
Sbjct: 556 TYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSYLEML 612


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 188/418 (44%), Gaps = 40/418 (9%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + +D+F  + +      + DF+ L   +    + +  +    +    G+A N +T SIMI
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
            C C       A   +  +   GY P+  TF+ L+N LC  GR+ EALE++D+M  +G K
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 188 PNIQTYNCLLKGLCYVGRVEEAY-----------------------------------EM 212
           P + T N L+ GLC  G+V +A                                    E+
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  ++   +K D   Y+ ++DG CK G  + A  L NE   +G   +++ + TL  G+C 
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G    G  LL+ M KR   PD +++S L++  +K GK+R A  + KEM++ G   D   
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             SL+ G C     +++ L+ A  + + M  K    +  T+ I+I    K    D+ L  
Sbjct: 355 YTSLIDGFC-----KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                  G +  T+T+N +IQ  C  GK++ A  L   M      P   SY +L+  L
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 187/417 (44%), Gaps = 40/417 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E +++ D + + G   ++   N L+  L +  +   AV         G  PN  T+  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C       A +++  M +     +   ++I+++ LCK G L  A  + ++M   G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 186 CKPNIQTYNCLLKGLCYVGR-----------------------------------VEEAY 210
            K +I  Y  L++G CY GR                                   + EA 
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E+   +   G+ PD  TYT+++DGFCK  + ++A  +L+  + +G  PN+ TFN L NGY
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK      G+ L + M  R  + D ++Y+TL+ G  + GK+  A  +F+EMV      D 
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                LL GLC     EK     A ++FEK+ K     D G Y I+I  +    K D+A 
Sbjct: 458 VSYKILLDGLCDNGEPEK-----ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                    G  P   T+N +I  LC +G + +A LL   M E    P+  +Y++LI
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 174/353 (49%), Gaps = 10/353 (2%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           IK D   +S+     ++  L      + A   F+E    G   +   ++ +IR +C    
Sbjct: 243 IKLDAVKYSI-----IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           + +  K++  M      P+V  F+ L++   K G+L+EA E+  +M + G  P+  TY  
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G C   ++++A  ML  + + G  P++ T+  +++G+CK    ++ +EL  +   RG
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           V  + VT+NTL  G+C+ G       L + M  R   PD +SY  LL+GL   G+   A+
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            IF+++ +   E+D  + N ++ G+C  S      ++DA+ +F  +  K    D  TY I
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASK-----VDDAWDLFCSLPLKGVKPDVKTYNI 532

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +I  L K     EA +      E GH P   T+N +I+A  GEG   K+  L+
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 156/330 (47%), Gaps = 8/330 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L    ++F+ ++  G    +  +  L+         +   K   +     + P+  
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            FS +I C+  +    EA ++   M   G  P+  T+T L++  CK  +L +A  +LD M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PNI+T+N L+ G C    +++  E+   +   G+  D  TY  ++ GFC++G+ 
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A EL  E + R V P++V++  L +G C  G P K + + + ++K     D   Y+ +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKDLLEDAYQVFEK 360
           ++G+    K+  A  +F  +   G + D +  N ++ GLC K S  E DLL      F K
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL------FRK 552

Query: 361 MTKKVSVTDPGTYGIVIRT-LGKGKKTDEA 389
           M +     +  TY I+IR  LG+G  T  A
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSA 582



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 127/269 (47%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L+E  ++   + + G +     +  L+      N+ + A        S G  PN 
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+I+I  YC  N   +  ++   M   G   +  T+  L+   C+ G+L+ A E+  +
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M     +P+I +Y  LL GLC  G  E+A E+   ++   ++ D+  Y  ++ G C   +
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++A +L      +GV P+V T+N +  G CK+G+  +   L + M++    P+  +Y+ 
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           L+   L  G    +  + +E+ R GF VD
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVD 596



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 1/113 (0%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           AS + +  D+F S+   G    V  +N ++  L        A   F +    G +PN  T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           ++I+IR +  + D  ++ K+I+ +   G+  + +T  ++V+ L   GRLK++ 
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSF 616


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 188/407 (46%), Gaps = 5/407 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE + + + +   G       +  LL  L        A  FF      G+ P   T+ I+
Sbjct: 286 KEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGIL 345

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I  Y  K    E    +D M +NG  P+   F I  ++  K G + +A+++ ++M + G 
Sbjct: 346 IHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGL 405

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN+  Y  L+  LC +GRV++A      + N+G+ P++  + +++ G C V +   A E
Sbjct: 406 SPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEE 465

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E +++G+ PN V FNTL    C  G  M+G  L+ LM+     PD  SY+ L++G  
Sbjct: 466 LVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYC 525

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             G+   A  +F  MV  G    E   N+LL G C  S      ++DAY +F +M +K  
Sbjct: 526 LTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR-----IDDAYCLFREMLRKGV 580

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                TY  ++  L + K+  EA     + I  G      T+N ++  LC    +D+A  
Sbjct: 581 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFK 640

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   +       +  ++ ++I  L +  +  DA  L+ A    G++P
Sbjct: 641 MFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVP 687



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 190/385 (49%), Gaps = 5/385 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E     D + ++G +     FN    A       + A+  F++   +GL+PN   +  
Sbjct: 355 LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 414

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A    + M + G  PN+  F  LV  LC   + + A E++ +M   G
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN   +N L+  LC VGRV E   ++  +++ G++PD ++YT ++ G+C  GR++EA 
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAE 534

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +  +  G++P  VT+NTL +GYC          L + M ++   P  ++Y+T+L+GL
Sbjct: 535 KVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 594

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            +  +   A  ++  M+  G + D    N +L GLC     + + +++A+++F+ +  K 
Sbjct: 595 FQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLC-----KSNCVDEAFKMFQSLCSKG 649

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  T+ I+I  L KG + ++A+         G +P  +T+  V + L  EG +++  
Sbjct: 650 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFD 709

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL 450
            L   M ++   P+    + L+ +L
Sbjct: 710 SLFSAMEKNGTAPNSQMLNALVRRL 734



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 198/479 (41%), Gaps = 78/479 (16%)

Query: 50  RSLQAQRFVD---RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVML---NEQET 103
           R L+ +R +    R ++  L + + +FD +       SV  FN LL A+      +  E 
Sbjct: 11  RCLELERIIAERARSRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASEL 70

Query: 104 AVKFFSE---ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           AV  F+      S  +APN  T+SI+I  +C              +   G+  +      
Sbjct: 71  AVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQ 130

Query: 161 LVNSLCKSGRLKEALEVLDQ-MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           L+  LC   R+ EA++VL Q M  +GC P+  +Y  LLKGLC   R EEA E+L  + +D
Sbjct: 131 LLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADD 190

Query: 220 --------------------------------------GLKPDVYTYTAVMDGFCKVGRS 241
                                                 G+ PDV TYT V+DG CK    
Sbjct: 191 HGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLF 250

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A  +  + I+ G  PN  T+N L +GY   G   + V +L+ M  R   PD  +Y +L
Sbjct: 251 DRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSL 310

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK------------------ 343
           LN L K G+ R A   F  M+R G +        L+ G   K                  
Sbjct: 311 LNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGL 370

Query: 344 ------------SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
                       ++ +  +++ A  +F KM +     +   YG +I  L K  + D+A +
Sbjct: 371 SPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEV 430

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             +  I  G  P  + FN+++  LC   K ++A  L++ M +    P+   ++ LI  L
Sbjct: 431 KFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNL 489



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 169/349 (48%), Gaps = 13/349 (3%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN  ++SI+I  +  +    +   +   M D G  P+V T+T +++ LCK+     A  V
Sbjct: 197 PNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGV 256

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
             QM   G KPN  TYNCL+ G   +G+ +E  +ML  +   GLKPD YTY ++++  CK
Sbjct: 257 FQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCK 316

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            GR  EA    +  I +G+ P V T+  L +GY  +G   +    L LM +    PD   
Sbjct: 317 NGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHI 376

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           ++   +   K G I  A+ IF +M + G   +     +L+  LC     +   ++    +
Sbjct: 377 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 436

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            E +T  + V +   YG+   T+ K ++ +E +  +   ++ G  P  + FN +I  LC 
Sbjct: 437 NEGVTPNIVVFNSLVYGLC--TVDKWERAEELVYEM---LDQGICPNAVFFNTLICNLCN 491

Query: 418 EGKIDKALLLLFLMYEHAKI-PSRTSYDMLIT------KLDQLEKSYDA 459
            G++ +   L+ LM EH  + P   SY  LI+      + D+ EK +D 
Sbjct: 492 VGRVMEGRRLIDLM-EHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDG 539



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 175/396 (44%), Gaps = 34/396 (8%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F E    G+ P+  T++ +I   C    F  A  V   M DNG+ PN  T+  L++   
Sbjct: 221 LFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYL 280

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
             G+ KE +++L++M   G KP+  TY  LL  LC  GR  EA     ++   G+KP V 
Sbjct: 281 SIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVS 340

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY  ++ G+   G  +E    L+  +E G++P+   FN  F+ Y K G   K + +   M
Sbjct: 341 TYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM 400

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSW 345
           ++    P+ ++Y  L++ L K G++  A   F +M+  G   +  + NSL+ GLC +  W
Sbjct: 401 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 460

Query: 346 EEKDLLEDAYQVFEK------------------------------MTKKVSV-TDPGTYG 374
           E  +  E  Y++ ++                              + + V V  D  +Y 
Sbjct: 461 ERAE--ELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYT 518

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            +I       +TDEA       + +G  P  +T+N ++   C   +ID A  L   M   
Sbjct: 519 PLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRK 578

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
              P   +Y+ ++  L Q ++  +A  LY   +  G
Sbjct: 579 GVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 614



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 125/266 (46%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D ++  G       +  L+    +    + A K F    S GL+P   T++ ++  YC
Sbjct: 501 LIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYC 560

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           + +   +A  +   M   G  P V T+  +++ L ++ R  EA E+   M   G K +I 
Sbjct: 561 SASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIY 620

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN +L GLC    V+EA++M  ++ + GL+ ++ T+T ++    K GR  +AM+L    
Sbjct: 621 TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 680

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              G+ PNVVT+  +     +EG+  +   L   M+K    P+    + L+  LL  G I
Sbjct: 681 PANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 740

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLL 337
             A +   ++    F V+    + L+
Sbjct: 741 SRAGAYLSKLDERNFSVEASTTSLLM 766



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 92/206 (44%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           AS + +   +F  + + G    V  +N +L  L        A + +    + G   + +T
Sbjct: 562 ASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYT 621

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I++   C  N   EA K+   +   G   N+ TFTI++ +L K GR ++A+++   + 
Sbjct: 622 YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIP 681

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G  PN+ TY  + + L   G +EE   +   ++ +G  P+     A++      G  +
Sbjct: 682 ANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDIS 741

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFN 268
            A   L++  ER  +    T + L +
Sbjct: 742 RAGAYLSKLDERNFSVEASTTSLLMS 767



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 6/192 (3%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
             E  +++ ++   GT   +  +N +L  L   N  + A K F    S GL  N  TF+I
Sbjct: 600 FSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 659

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI          +A  +   +  NG  PNV T+ ++  +L + G L+E   +   M + G
Sbjct: 660 MIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 719

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN Q  N L++ L + G +  A   L  +       +  T + +M  F      + A 
Sbjct: 720 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAK 779

Query: 246 EL------LNEA 251
            L      LNEA
Sbjct: 780 SLPEKYHFLNEA 791



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 50/120 (41%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K++ + E   +F S+   G   ++  F  ++ AL+    +E A+  F+   + GL PN  
Sbjct: 631 KSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVV 690

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ ++      +    E   +   M  NG  PN      LV  L   G +  A   L ++
Sbjct: 691 TYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 750


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 209/426 (49%), Gaps = 20/426 (4%)

Query: 60  RIKASPLKERIDIFDS--------IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA 111
           R+   PL   ID  D         +  +     + +FN +L +LV +N  + A+ F  + 
Sbjct: 20  RLHIQPLPSFIDNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQM 79

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
              G+ P  +TF+I+I C+ +      A  ++  +   GY P+  T   L+  LC +G++
Sbjct: 80  ELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKV 139

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL---KPDVYTY 228
           KEAL   D + R     +  +Y  L+ GLC  G    A ++L  +  +GL   +PDV  Y
Sbjct: 140 KEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMY 197

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           TA++D FCK     +A +L +E I + + PNVVTFN+L  G+C  G   + VGLL  M  
Sbjct: 198 TAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSL 257

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
            N  P+  +++ L++GL K G+++ A S+   M++ G E +     SL+ G  +     K
Sbjct: 258 NNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNK 317

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTIT 407
                A  VF  ++ +    +  +Y ++I  L K K  DEA + L   + + ++ P T+T
Sbjct: 318 -----AKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEA-VKLFKEMHLKNMTPNTVT 371

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           ++++I  LC  G+I     L+  +    +  +  +Y+ L+  L +  +   A AL     
Sbjct: 372 YSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMK 431

Query: 468 KQGVIP 473
            +G+ P
Sbjct: 432 DEGIQP 437



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 192/398 (48%), Gaps = 6/398 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA-PNSWTFS 124
           +KE ++  D + +   +     +  L+  L    E   A++   +     L  P+   ++
Sbjct: 139 VKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYT 198

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +I  +C      +A  +   M     +PNV TF  L+   C  G+LKEA+ +L++M   
Sbjct: 199 AIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLN 258

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
              PN+ T+N L+ GLC  G V++A  +L  +   G++P+V TYT++MDG+  V   N+A
Sbjct: 259 NVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKA 318

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             + N    RGVTPNV +++ + NG CK     + V L K M  +N  P+ ++YS+L++G
Sbjct: 319 KHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDG 378

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K G+I     +  E+   G   +    NSLL GLC     +K     A  +  KM  +
Sbjct: 379 LCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDK-----AIALLTKMKDE 433

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY  ++  L K  +  +A       +  G+      +  +I  LC EG  D+A
Sbjct: 434 GIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEA 493

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           L LL  M ++  +P   +Y+ LI+ L +  K+  A  L
Sbjct: 494 LSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKL 531



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 146/276 (52%), Gaps = 1/276 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        +D + K   +K+   +   + K G   +V  +  L+    ++ E   A  
Sbjct: 261 NPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKH 320

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F+  S  G+ PN  ++S+MI   C      EA K+   M      PN  T++ L++ LC
Sbjct: 321 VFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLC 380

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSGR+ +  +++D++   G   NI TYN LL GLC   +V++A  +L  +K++G++PD+ 
Sbjct: 381 KSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMS 440

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYT ++DG CK GR  +A  +  + + +G   N+  +  + NG CKEG   + + LL  M
Sbjct: 441 TYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQM 500

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           +   C+PD ++Y TL++ L K  K   AV + +EM+
Sbjct: 501 EDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMI 536



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 115/218 (52%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F++I   G   +V  ++ ++  L      + AVK F E     + PN+ T+S +I   C
Sbjct: 321 VFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLC 380

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +   +ID + + G   N+ T+  L+N LCK+ ++ +A+ +L +M   G +P++ 
Sbjct: 381 KSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMS 440

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+ GLC  GR+++A  +  ++   G   ++  YT +++G CK G  +EA+ LL++ 
Sbjct: 441 TYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQM 500

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            + G  P+ VT+ TL +   K     K V LL+ M  R
Sbjct: 501 EDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 175/360 (48%), Gaps = 5/360 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  ++     L     A K F E     + P+  T++ +I   C      EAR++ + M 
Sbjct: 350 YTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEML 409

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+  T+T L++  CK+G +KEA  V +QM + G  PN+ TY  L  GLC  G ++
Sbjct: 410 VKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEID 469

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A E+L  +   GL+P+VYTY  +++G CK+G   + ++L+ E    G  P+ +T+ TL 
Sbjct: 470 VANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLM 529

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           + YCK G   K   LL++M  +   P  ++++ L+NG    G +     + + M+  G  
Sbjct: 530 DAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIM 589

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +    NSL++  C+     K+ +    ++++ M  +  + D  TY I+I+   K +   
Sbjct: 590 PNATTFNSLMKQYCI-----KNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA       +E G+     T++ +I+      K  +A  L   M +H  +  +  YD+ +
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 207/417 (49%), Gaps = 11/417 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + + + D +K  G       +N++++ L    E   A +       +G+ P++  ++ 
Sbjct: 293 LDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTT 352

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C   +   A K+ D M      P++ T+T +++ +CKSG++ EA E+ ++M   G
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +P+  TY  L+ G C  G ++EA+ +   +   GL P+V TYTA+ DG CK G  + A 
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVAN 472

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL+E   +G+ PNV T+NT+ NG CK G   + V L++ M      PD I+Y+TL++  
Sbjct: 473 ELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G++  A  + + M+    +      N L+ G CM       +LED  ++ E M +K 
Sbjct: 533 CKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSG-----MLEDGERLIEWMLEKG 587

Query: 366 SVTDPGTYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            + +  T+  +++        + T E    +H   + G +P + T+N +I+  C    + 
Sbjct: 588 IMPNATTFNSLMKQYCIKNNMRATTEIYKAMH---DRGVMPDSNTYNILIKGHCKARNMK 644

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           +A  L   M E     +  +YD LI    + +K  +A  L+    K G++ ++   D
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYD 701



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 161/341 (47%), Gaps = 40/341 (11%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD +++      +  +  ++  +    +   A + F+E    GL P+  T++ +I  YC
Sbjct: 369 LFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYC 428

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +  EA  V + M   G  PNV T+T L + LCK+G +  A E+L +M R G +PN+ 
Sbjct: 429 KAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVY 488

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL--- 248
           TYN ++ GLC +G +E+  +++  +   G  PD  TYT +MD +CK+G   +A ELL   
Sbjct: 489 TYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM 548

Query: 249 --------------------------------NEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                                              +E+G+ PN  TFN+L   YC +   
Sbjct: 549 LNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNM 608

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                + K M  R  +PD  +Y+ L+ G  K   ++ A  + KEMV  G+ V     ++L
Sbjct: 609 RATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDAL 668

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           +RG     ++ K  +E A ++FE+M K   V +   Y I +
Sbjct: 669 IRGF----YKRKKFVE-ARKLFEEMRKHGLVAEKDIYDIFV 704



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 199/412 (48%), Gaps = 13/412 (3%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K  + +F+   + G  W+    N +L  L  L +   A     + +  G  P+  ++ +
Sbjct: 223 IKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGV 282

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  YC   +  +  K++D +   G  P+   +  ++  LCK+G + EA ++L  M + G
Sbjct: 283 VVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWG 342

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+   Y  ++ G C +G V  A ++   ++   + PD+ TYT+V+ G CK G+  EA 
Sbjct: 343 VFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAR 402

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+ NE + +G+ P+ VT+  L +GYCK G   +   +   M ++   P+ ++Y+ L +GL
Sbjct: 403 EMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGL 462

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I  A  +  EM R G + +    N+++ GLC     +   +E   ++ E+M    
Sbjct: 463 CKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLC-----KIGNIEQTVKLMEEMDLAG 517

Query: 366 SVTDPGTYGIVIRT---LGKGKKTDEAL-IHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
              D  TY  ++     +G+  K  E L I L+  ++    P  +TFN ++   C  G +
Sbjct: 518 FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQ----PTLVTFNVLMNGFCMSGML 573

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +    L+  M E   +P+ T+++ L+ +            +Y A   +GV+P
Sbjct: 574 EDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMP 625



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 183/359 (50%), Gaps = 9/359 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMI-RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
           A K F +   YG+  +  + ++ + R  CN      A KV +   + G   N  +  I++
Sbjct: 190 AQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVL 249

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
           + LC+ G+++EA  +L QM   G  P++ +Y  ++ G C +G +++  +++  +K  GLK
Sbjct: 250 HCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLK 309

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           PD Y Y  ++   CK G   EA +LL    + GV P+ V + T+ +G+CK G       L
Sbjct: 310 PDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKL 369

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
              M+++  +PD ++Y+++++G+ K GK+  A  +F EM+  G E DE    +L+ G C 
Sbjct: 370 FDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYC- 428

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
           K+ E    +++A+ V  +M +K    +  TY  +   L K  + D A   LH     G  
Sbjct: 429 KAGE----MKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQ 484

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYD 458
           P   T+N ++  LC  G I++ + L+  M      P   +Y  L+    K+ ++ K+++
Sbjct: 485 PNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHE 543



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 109/233 (46%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   + + G   +V  +N ++  L  +   E  VK   E    G  P++ T++ ++  Y
Sbjct: 473 ELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +  +A +++  M +    P + TF +L+N  C SG L++   +++ M   G  PN 
Sbjct: 533 CKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNA 592

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            T+N L+K  C    +    E+   + + G+ PD  TY  ++ G CK     EA  L  E
Sbjct: 593 TTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKE 652

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
            +E+G +    T++ L  G+ K    ++   L + M+K   + +K  Y   ++
Sbjct: 653 MVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 73/163 (44%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+    M    E   +        G+ PN+ TF+ +++ YC KN+     ++   M 
Sbjct: 560 FNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMH 619

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  P+  T+ IL+   CK+  +KEA  +  +M   G      TY+ L++G     +  
Sbjct: 620 DRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFV 679

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           EA ++   ++  GL  +   Y   +D   + G     +EL +E
Sbjct: 680 EARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDE 722


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 217/482 (45%), Gaps = 34/482 (7%)

Query: 26  FNKLVVFAAASLSTAESLDLKEN-PRSLQAQRFVDR--IKASPLKERIDIFDSIKKDGTN 82
           F K   F    L TA+SL    N  ++ +  R + R   +   L E + +   ++  G  
Sbjct: 120 FEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLT 179

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
            S    N +L   V L   E A   F E S  G+ P+S ++ +M+          EA + 
Sbjct: 180 PSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRW 239

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           +  M   G+ P+  T T+++ +LC++G +  A+    +M  +G KPN+  +  L+ GLC 
Sbjct: 240 LTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 299

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV-TPNVV 261
            G +++A+EML  +  +G KP+VYT+TA++DG CK G + +A  L  + +      PNV 
Sbjct: 300 KGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVH 359

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+ ++  GYCKE    +   L   MK++   P+  +Y+TL+NG  K G    A  +   M
Sbjct: 360 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLM 419

Query: 322 VRFGFEVDERMMNSLLRGLCMKSW--EEKDLLEDAYQV---------------------- 357
              GF  +    N+ +  LC KS   E  +LL  A+                        
Sbjct: 420 GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI 479

Query: 358 ------FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
                 F +M K     D     I+I    + KK  E+       + +G IP   T+ ++
Sbjct: 480 NQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSM 539

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I   C EG ID AL     M  H  +P   +Y  LI+ L +     +AC LY A + +G+
Sbjct: 540 ISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 599

Query: 472 IP 473
            P
Sbjct: 600 SP 601



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 182/412 (44%), Gaps = 10/412 (2%)

Query: 43  LDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
           +DL   P  +     +D + K   +K+  ++ + + ++G   +V     L+  L      
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338

Query: 102 ETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           E A + F +   S    PN  T++ MI  YC ++    A  +   M + G  PNV T+T 
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+N  CK+G    A E+++ MG  G  PNI TYN  +  LC   R  EAYE+L    + G
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           L+ D  TYT ++   CK    N+A+       + G   ++   N L   +C++    +  
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            L +L+     +P K +Y+++++   K G I  A+  F  M R G   D     SL+ GL
Sbjct: 519 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C KS     ++++A +++E M  +       T   +     K   +  A+I L   ++  
Sbjct: 579 CKKS-----MVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMI-LLEPLDKK 632

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
              RT+    +++ LC E K+  A L    + E      R +     T   +
Sbjct: 633 LWIRTV--RTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSE 682


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 199/413 (48%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++A  L+E  + F  +++ G + S++  N LL  LV     + A + + E    G+  N 
Sbjct: 198 VQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNV 257

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T +IM+   C    F      +  M   G   ++ T+  L+N+ C+ G ++EA ++L+ 
Sbjct: 258 YTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNS 317

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
               G +P + TYN +L GLC +G+ + A ++L+ +   GL P+  TY  ++   C+   
Sbjct: 318 FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDN 377

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA E+ +E   RGV P++V+F++L     + G   + +   + M++   +PD + Y+ 
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTI 437

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G  + G +  A+ +  EM+  G  +D    N+ L GLC     +K +  DA  +F +
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLC-----KKKMFADADMLFNE 492

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++  V D  T+  +IR   K    D+AL      +     P  +T+N +I   C  G+
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + +A  L   M     IP   SY  ++          +A  L    L++G+ P
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 200/441 (45%), Gaps = 30/441 (6%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   + +S    G    +  +N +L  L  + + + A     E    GL PN+ T++ 
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C +++  EA+++ D M   G  P++ +F+ L+  L ++G L +AL    +M R G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+   Y  L+ G C  G + +A +M   +   G   DV TY   ++G CK     +A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L NE +ERG+ P+  TF TL  GYCK+G   K + L + M + N  PDK++Y+TL++G 
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC------------------------ 341
            K G++  A  ++ +M+R     D     ++L G C                        
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 342 ------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
                 +K +     +  AY+   KM     + D  +Y  +I    K    ++A I ++ 
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
             + G     IT+N ++   C EGK+ +A  +L  M E    P   +Y  LI      + 
Sbjct: 668 MEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDN 727

Query: 456 SYDACALYGAALKQGVIPQRK 476
             +A   +   L++G++P  +
Sbjct: 728 MKEAFRFHDEMLQRGLVPDDR 748



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 168/386 (43%), Gaps = 40/386 (10%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           + +++R Y       E  +    +   G   ++     L+  L ++G +  A E+  ++ 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           R G + N+ T N ++  LC   + E     L +++  G+  D+ TY  +++ +C+ G   
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEG-----------------TP--------- 276
           EA +LLN    RG+ P ++T+N +  G CK G                 TP         
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 277 ---------MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
                    ++   +   M +R  LPD +S+S+L+  L + G +  A+  F+EM R G  
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D  +   L+ G C         L DA ++ ++M  +    D  TY   +  L K K   
Sbjct: 430 PDNVIYTILIDGFC-----RNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A +  +  +E G +P   TF  +I+  C +G +DKAL L   M      P + +Y+ LI
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +  +   A  L+   +++ +IP
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIP 570


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 196/420 (46%), Gaps = 30/420 (7%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+  L   ++ + A ++     + G  P+ +T++ +I  YC      EA +++ 
Sbjct: 280 VVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLK 339

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
                G+ P+  T+  L+N LC  G ++ ALE+ ++      KP++  YN L+KGLC  G
Sbjct: 340 DAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 399

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            +  A +++  +  +G  PD++TY  +++G CK+G  ++A  ++N+AI +G  P+V TFN
Sbjct: 400 LILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFN 459

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL +GYCK       + L++ M      PD I+Y+++LNGL K GK +     F+EM+  
Sbjct: 460 TLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILK 519

Query: 325 GFEVDERMMNSLLRGLC-MKSWEEKDL-----------------------------LEDA 354
           G   +    N L+   C +   EE                                L+ A
Sbjct: 520 GCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGA 579

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           Y +F+K+ +K       T+ I+I           A       I  G+ P   T+  ++  
Sbjct: 580 YLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDG 639

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           LC    +D+A   L  M     +PS  ++  ++  L    +  +A A+    ++ GV+P+
Sbjct: 640 LCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPE 699



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 184/372 (49%), Gaps = 6/372 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E AV       +Y +AP+  T++ ++R  C  +   EA + +  M + G  P+  T+  +
Sbjct: 263 EEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTI 321

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++  CKSG L+EA E+L      G  P+  TY  L+ GLC  G +E A E+    +   L
Sbjct: 322 IDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDL 381

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           KPD+  Y +++ G C+ G    A++++NE +E G  P++ T+N + NG CK G       
Sbjct: 382 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAV 441

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           ++     +  LPD  +++TL++G  K  K+  A+ + + M  +G   D    NS+L GLC
Sbjct: 442 VMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLC 501

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
            K+ + K++ E     FE+M  K    +  TY I+I    K  + +EA   +    + G 
Sbjct: 502 -KAGKAKEVNE----TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGL 556

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           +P  ++FN +I   C  G +D A LL   + E     +  ++++LI           A  
Sbjct: 557 VPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 616

Query: 462 LYGAALKQGVIP 473
           ++G  + +G  P
Sbjct: 617 IFGEMISKGYKP 628



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 210/469 (44%), Gaps = 31/469 (6%)

Query: 35  ASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMA 94
           A+L++A S    ++ + L         +A  L+  +D F+ +       +   +N ++ A
Sbjct: 56  AALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDA 115

Query: 95  LVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPN 154
           LV     + A K +    + G+AP++ T ++ ++ +C       A +++  + + G    
Sbjct: 116 LVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAK 175

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
              +  +V  L   G    A  + D+M      P++ T+N +L  LC  G V E+  +L 
Sbjct: 176 PAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLA 235

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            V   G+  + +T    + G C+ GR  EA+ L+ E +   V P+VVT+NTL  G CK+ 
Sbjct: 236 KVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALV-ERMGAYVAPDVVTYNTLMRGLCKDS 294

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              +    L  M  + C+PD  +Y+T+++G  K G ++ A  + K+ V  GF  D     
Sbjct: 295 KVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYC 354

Query: 335 SLLRGLCMKS-----------WEEKDLLED-------------------AYQVFEKMTKK 364
           SL+ GLC +             + KDL  D                   A QV  +M ++
Sbjct: 355 SLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEE 414

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY I+I  L K     +A + ++ AI  G++P   TFN +I   C   K+D A
Sbjct: 415 GCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSA 474

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L L+  M+ +   P   +Y+ ++  L +  K+ +    +   + +G  P
Sbjct: 475 LQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRP 523



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 165/341 (48%), Gaps = 5/341 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++  +++F+  +       +  +N L+  L        A++  +E    G  P+ WT++I
Sbjct: 366 IERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNI 425

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C   +  +A  V++     GY P+V TF  L++  CK  +L  AL+++++M   G
Sbjct: 426 IINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYG 485

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ TYN +L GLC  G+ +E  E    +   G +P+  TY  +++ FCK+ +  EA 
Sbjct: 486 IAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 545

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            ++    + G+ P+ V+FNTL +G+C+ G       L + + ++       +++ L+   
Sbjct: 546 GVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAY 605

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
                ++ A  IF EM+  G++ D      L+ GLC  +  ++     AY    +M  K 
Sbjct: 606 SSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDR-----AYAHLAEMISKG 660

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
            V    T+G ++  L    +  EA+  +H  + MG +P  +
Sbjct: 661 FVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 132/314 (42%), Gaps = 41/314 (13%)

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + +  ++GRL+ A++  ++M    C P    YN ++  L      ++A+++ + +   G+
Sbjct: 78  IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PD  T+T  +  FC  GR + A+ LL    ERG       + T+  G    G       
Sbjct: 138 APDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARH 197

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L   M  R+  PD  +++ +L+ L + G +  + ++  ++++ G   ++   N  +RGLC
Sbjct: 198 LFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLC 257

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                E   LE+A  + E+M   V+                                   
Sbjct: 258 -----EDGRLEEAVALVERMGAYVA----------------------------------- 277

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P  +T+N +++ LC + K+ +A   L  M     IP   +Y+ +I    +     +A  
Sbjct: 278 -PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATE 336

Query: 462 LYGAALKQGVIPQR 475
           L   A+ +G +P R
Sbjct: 337 LLKDAVFKGFVPDR 350



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 92/200 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA   KE  + F+ +   G   +   +N L+     +N+ E A          GL P++ 
Sbjct: 502 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAV 561

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F+ +I  +C   D   A  +   + + GY     TF IL+ +      ++ A ++  +M
Sbjct: 562 SFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM 621

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP++ TY  L+ GLC    V+ AY  L  + + G  P + T+  +++      R 
Sbjct: 622 ISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRV 681

Query: 242 NEAMELLNEAIERGVTPNVV 261
           +EA+ +++  +  GV P VV
Sbjct: 682 SEAVAIIHIMVRMGVVPEVV 701


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 199/410 (48%), Gaps = 11/410 (2%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     ++ DG    V  +N L+  L        A K F   +  GL P   T+  +
Sbjct: 175 KEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTL 234

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG HPN   F+ILV +  K  +++EA+ V  +M + G 
Sbjct: 235 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL 294

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN  TY  ++  LC  GRVE+A      + ++GL P    Y +++ G C   +   A E
Sbjct: 295 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 354

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E ++RG+  N + FN++ + +CKEG  ++   L  LM +    PD I+YSTL++G  
Sbjct: 355 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 414

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A  +   MV  G + D    ++L+ G C  S      ++DA  +F +M     
Sbjct: 415 LAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISR-----MKDALVLFREMESSGV 469

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY I+++ L + ++T  A        + G      T+N ++  LC     D AL 
Sbjct: 470 SPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALR 529

Query: 427 L---LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   L LM    K+ +RT ++++I  L ++ ++ +A  L+ A    G++P
Sbjct: 530 MFQNLCLM--DLKLEART-FNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 576



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 201/441 (45%), Gaps = 47/441 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG--LAPNSWTFSIMIRC 129
           +FD + + G    V  +N LL  L   N  + A++     +  G    P+  ++S +I  
Sbjct: 39  VFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +  + D  +     + M D    PNV T+  ++ +LCK+  + +A+EVL  M + G  P+
Sbjct: 98  FFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 157

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN ++ G C  G+ +EA   L  +++DG++PDV TY ++MD  CK GR  EA ++ +
Sbjct: 158 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 217

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL------------------------ 285
              +RG+ P + T+ TL  GY  +G  ++  GLL L                        
Sbjct: 218 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 277

Query: 286 -----------MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
                      M+++   P+ ++Y  ++  L K G++  A+  F++M+  G      + N
Sbjct: 278 KVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 337

Query: 335 SLLRGLCM-KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD-EALIH 392
           SL+ GLC    WE  + L     + E + + + +       I+     +G+  + E L  
Sbjct: 338 SLIHGLCTCNKWERAEEL-----ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 392

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L   + +G  P  IT++ +I   C  GK+D+A  LL  M      P   +Y  LI    +
Sbjct: 393 L--MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCK 450

Query: 453 LEKSYDACALYGAALKQGVIP 473
           + +  DA  L+      GV P
Sbjct: 451 ISRMKDALVLFREMESSGVSP 471



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 180/397 (45%), Gaps = 41/397 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IFDS+ K G    ++ +  LL                      G+ PN + FSI++  Y 
Sbjct: 215 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 274

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    EA  V   M   G +PN  T+  ++  LCKSGR+++A+   +QM   G  P   
Sbjct: 275 KQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 334

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGL------------------------------ 221
            YN L+ GLC   + E A E+++ + + G+                              
Sbjct: 335 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 394

Query: 222 -----KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                KPD+ TY+ ++DG+C  G+ +EA +LL   +  G+ P+ VT++TL NGYCK    
Sbjct: 395 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRM 454

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
              + L + M+     PD I+Y+ +L GL +  +   A  ++  + + G +++    N +
Sbjct: 455 KDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNII 514

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           L GLC     +  L +DA ++F+ +       +  T+ I+I  L K  + DEA       
Sbjct: 515 LHGLC-----KNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 569

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
              G +P   T+  + + + G+G +++ L  LFL  E
Sbjct: 570 SSNGLVPNYWTYRLMAENIIGQGLLEE-LDQLFLSME 605



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 107/234 (45%), Gaps = 43/234 (18%)

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR--NCLPDKISYST 300
           +A  + +E + RG+ P+V ++N L NG C E    + + LL +M     +C PD +SYST
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++NG  K G +    S + EM+      D+R+  +++                       
Sbjct: 94  VINGFFKEGDLDKTYSTYNEML------DQRISPNVV----------------------- 124

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
                      TY  +I  L K +  D+A+  L   ++ G +P  +T+N+++   C  G+
Sbjct: 125 -----------TYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 173

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             +A++ L  M      P   +Y+ L+  L +  +  +A  ++ +  K+G+ P+
Sbjct: 174 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 4/141 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +++  I K G    +S +N +L  L      + A++ F       L   + TF+IMI   
Sbjct: 494 ELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDAL 553

Query: 131 --CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
               +ND  EA+ +      NG  PN  T+ ++  ++   G L+E  ++   M   GC  
Sbjct: 554 LKVGRND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTV 611

Query: 189 NIQTYNCLLKGLCYVGRVEEA 209
           +    N +++ L   G +  A
Sbjct: 612 DSGMLNFIVRELLQRGEITRA 632


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 199/413 (48%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++A  L+E  + F  +++ G + S++  N LL  LV     + A + + E    G+  N 
Sbjct: 198 VQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNV 257

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T +IM+   C    F      +  M   G   ++ T+  L+N+ C+ G ++EA ++L+ 
Sbjct: 258 YTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNS 317

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
               G +P + TYN +L GLC +G+ + A ++L+ +   GL P+  TY  ++   C+   
Sbjct: 318 FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDN 377

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA E+ +E   RGV P++V+F++L     + G   + +   + M++   +PD + Y+ 
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTI 437

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G  + G +  A+ +  EM+  G  +D    N+ L GLC     +K +  DA  +F +
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLC-----KKKMFADADMLFNE 492

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++  V D  T+  +IR   K    D+AL      +     P  +T+N +I   C  G+
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + +A  L   M     IP   SY  ++          +A  L    L++G+ P
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 200/441 (45%), Gaps = 30/441 (6%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   + +S    G    +  +N +L  L  + + + A     E    GL PN+ T++ 
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C +++  EA+++ D M   G  P++ +F+ L+  L ++G L +AL    +M R G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+   Y  L+ G C  G + +A +M   +   G   DV TY   ++G CK     +A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L NE +ERG+ P+  TF TL  GYCK+G   K + L + M + N  PDK++Y+TL++G 
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC------------------------ 341
            K G++  A  ++ +M+R     D     ++L G C                        
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 342 ------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
                 +K +     +  AY+   KM     + D  +Y  +I    K    ++A I ++ 
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
             + G     IT+N ++   C EGK+ +A  +L  M E    P   +Y  LI      + 
Sbjct: 668 MEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDN 727

Query: 456 SYDACALYGAALKQGVIPQRK 476
             +A   +   L++G++P  +
Sbjct: 728 MKEAFRFHDEMLQRGLVPDDR 748



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 168/386 (43%), Gaps = 40/386 (10%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           + +++R Y       E  +    +   G   ++     L+  L ++G +  A E+  ++ 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           R G + N+ T N ++  LC   + E     L +++  G+  D+ TY  +++ +C+ G   
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEG-----------------TP--------- 276
           EA +LLN    RG+ P ++T+N +  G CK G                 TP         
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 277 ---------MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
                    ++   +   M +R  LPD +S+S+L+  L + G +  A+  F+EM R G  
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D  +   L+ G C         L DA ++ ++M  +    D  TY   +  L K K   
Sbjct: 430 PDNVIYTILIDGFC-----RNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A +  +  +E G +P   TF  +I+  C +G +DKAL L   M      P + +Y+ LI
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +  +   A  L+   +++ +IP
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIP 570


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 196/417 (47%), Gaps = 15/417 (3%)

Query: 56  RFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA-VK-FFSEASS 113
           +F D  KA  L   + I   IK D        +N+++     L EQ T+ VK   SE   
Sbjct: 388 KFGDMEKADALLNEM-IMVGIKPD-----TQTYNNMIEGY--LKEQNTSRVKDLLSEMKK 439

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
             L P ++T  ++I   C      +A +V + M   G  PN   +T L+    + GR +E
Sbjct: 440 SNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQE 499

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A+ +L  M + G +P++  YN ++ GLC   ++EEA + L+ +   GLKP+VYTY A++ 
Sbjct: 500 AVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIH 559

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G+CK G    A     E +  G+ PN V    L +GYCKEG+  +   + + M  R+  P
Sbjct: 560 GYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHP 619

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D  +YS L++GLL+ GK++ A+ +  E +  G   D    NS++ G C +    K     
Sbjct: 620 DVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGK----- 674

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A+Q+ E M +K    +  TY  +I  L K  + + A          G     +T+  +I 
Sbjct: 675 AFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIID 734

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
             C  G + KA  L   M      P    Y  LI    +   +  A +L+  ++++G
Sbjct: 735 GYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG 791



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 161/316 (50%), Gaps = 6/316 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  ++E  D    + + G   +V  +  L+       E + A ++F E    G+APN  
Sbjct: 528 KSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDV 587

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
             + +I  YC +    EA  +  CM     HP+V T++ L++ L ++G+L+ A+E+L + 
Sbjct: 588 VCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ TYN ++ G C  G + +A+++   +   G+ P++ TY A+++G CK G  
Sbjct: 648 LEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEI 707

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A EL +    +G+  N VT+ T+ +GYCK G   K   L   M  +   PD   YS L
Sbjct: 708 ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSAL 767

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K G    A+S+F E V+ GF      +N+L+ G C KS +    + +A Q+ E M
Sbjct: 768 IDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFC-KSGK----VIEANQLLEDM 821

Query: 362 TKKVSVTDPGTYGIVI 377
             K    D  TY I+I
Sbjct: 822 VDKHVKPDHVTYTILI 837



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 194/414 (46%), Gaps = 5/414 (1%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
             +A   KE   +   +++ G + S+  +N ++  L    E + A +        GL  +
Sbjct: 246 HFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVAD 305

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            +T+SI+I  +  +    EA+ +++ MF  G  P    +T L++   + G   EA  V +
Sbjct: 306 VFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKE 365

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M   G K N+ TYN L+KG+C  G +E+A  +L  +   G+KPD  TY  +++G+ K  
Sbjct: 366 EMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQ 425

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
            ++   +LL+E  +  + P   T   + NG C+ G+      + ++M      P+ + Y+
Sbjct: 426 NTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYT 485

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL+ G ++ G+ + AV I K M + G + D    NS++ GLC KS +    +E+A     
Sbjct: 486 TLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLC-KSRK----MEEAKDYLV 540

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M ++    +  TYG +I    K  +   A  +    +  G  P  +    +I   C EG
Sbjct: 541 EMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEG 600

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              +A  +   M   +  P   +Y  LI  L +  K   A  L    L++G++P
Sbjct: 601 STTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVP 654



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 185/411 (45%), Gaps = 41/411 (9%)

Query: 50  RSLQAQRFVDRIKASPL-KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFF 108
           R +  +  +D  K   L  E +  F   K++G    +   N LL  L+  N+ E   +F+
Sbjct: 165 RGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFY 224

Query: 109 SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS 168
           +      +  + +T++ +I  +    +  E ++++  M + G  P++ T+ +++  LC++
Sbjct: 225 NGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRA 284

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G + EA E+   M + G   ++ TY+ L+ G     R  EA  ML  + + GLKP    Y
Sbjct: 285 GEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAY 344

Query: 229 TAVMDGFCKVGRSNEAME-----------------------------------LLNEAIE 253
           TA++DGF + G S EA                                     LLNE I 
Sbjct: 345 TALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM 404

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
            G+ P+  T+N +  GY KE    +   LL  MKK N +P   +   ++NGL + G I  
Sbjct: 405 VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIED 464

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A  +F+ MV  G + +  +  +L++G       ++   ++A ++ + M KK    D   Y
Sbjct: 465 ASRVFEIMVSLGVKPNAVIYTTLIKGHV-----QEGRFQEAVRILKVMDKKGVQPDVLCY 519

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             VI  L K +K +EA  +L   IE G  P   T+  +I   C  G++  A
Sbjct: 520 NSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVA 570



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 182/420 (43%), Gaps = 39/420 (9%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K     E   IF  +     +  V  ++ L+  L+   + + A++  SE    GL P+ +
Sbjct: 598  KEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVF 657

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T++ +I  +C +    +A ++ + M   G  PN+ T+  L+N LCK+G ++ A E+ D +
Sbjct: 658  TYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGI 717

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV---------- 231
               G   N  TY  ++ G C  G + +A+ +   +   G+ PD + Y+A+          
Sbjct: 718  PGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNT 777

Query: 232  ------------------------MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
                                    MDGFCK G+  EA +LL + +++ V P+ VT+  L 
Sbjct: 778  EKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILI 837

Query: 268  NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            + +CK G   +       M+KRN +P+ ++Y+ LL+G    G+     ++F EM+    E
Sbjct: 838  DYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIE 897

Query: 328  VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
             D    + ++     +    K L     ++ + M KK          ++I  L + +   
Sbjct: 898  PDGVTWSVMIDAHLKEGDHVKTL-----KLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVS 952

Query: 388  EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            E L  L    E G      T + +++     GK+D A  +L  M     +P  T  + LI
Sbjct: 953  EVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 171/407 (42%), Gaps = 36/407 (8%)

Query: 98  LNEQETAVKFFSEAS-SYGLAPNSWTFSIMIRCYCNKNDFFEARKVID--CMFDNGYHPN 154
           +N+ +  + FF+      G +    +FSI+    CN   F  A  V++   M  +G +  
Sbjct: 78  VNDPKRLLDFFNWVQFQMGFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSE 137

Query: 155 V----------------------------TTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +                              F +L++   K G   EA+       R G 
Sbjct: 138 ILDSLIKSCKEFDLNNVNGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGF 197

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
              +   N LL  L    ++E  +     +    +  DVYTYT +++   + G + E   
Sbjct: 198 VVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKR 257

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           LL E  E+G +P++VT+N +  G C+ G   +   L KLM K+  + D  +YS L++G  
Sbjct: 258 LLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFG 317

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K  +   A  + +EM   G +       +L+ G  M+  +      +A++V E+M  +  
Sbjct: 318 KQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGF-MRQGDSG----EAFRVKEEMLARGV 372

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             +  TY  +++ + K    ++A   L+  I +G  P T T+NN+I+    E    +   
Sbjct: 373 KLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKD 432

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LL  M +   +P+  +  M+I  L +     DA  ++   +  GV P
Sbjct: 433 LLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKP 479



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 113/277 (40%), Gaps = 36/277 (12%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K+  L +   +FD +   G       ++ L+         E A+  F E+   G A  S 
Sbjct: 738  KSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTS- 796

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            + + ++  +C      EA ++++ M D    P+  T+TIL++  CK+G LKEA +    M
Sbjct: 797  SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDM 856

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG------- 234
             +    PN  TY  LL G    GR  E + +   +    ++PD  T++ ++D        
Sbjct: 857  QKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDH 916

Query: 235  ----------------------------FCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                                         C+    +E +++L +  E+G+  ++ T +TL
Sbjct: 917  VKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTL 976

Query: 267  FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
               + K G       +LK M +   +PD    + L+N
Sbjct: 977  VRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLIN 1013


>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
 gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
          Length = 381

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 187/381 (49%), Gaps = 41/381 (10%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ D ++ +G   +V  +N ++ A+    + + A +  +   S G  PN+  ++ +++ 
Sbjct: 1   MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C+   + +A +++D M      PN  T  ++VN+L + G L++    L++M + GC  N
Sbjct: 61  LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTAN 120

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TYN ++ G+C  G V+ A E+L N+++ G KPD+ TY  ++ G C   +  +A EL+ 
Sbjct: 121 VVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMI 180

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +  +    P+ VTFNT+ +  C++G  ++   + K M ++ C P+  +YST++ GL K G
Sbjct: 181 KMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAG 240

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K+  A+ +  EM   G+  D+                                       
Sbjct: 241 KMEQALELLNEMASKGYNTDK--------------------------------------- 261

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
              Y ++  +L K  K +E +  +H   + G  P+T+ FN V+  LC  GK D A+ +L 
Sbjct: 262 --MYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLA 319

Query: 430 LMYEHAKIPSRTSYDMLITKL 450
            M  +  +P   +Y +LI  L
Sbjct: 320 DMVSYGCMPDELTYIILIEGL 340



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 40/296 (13%)

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           +E++D M   GC+PN+ TYN ++  +C  G V++A E+L ++ + G KP+   Y  V+ G
Sbjct: 1   MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            C + R  +A ELL+E +     PN  T N + N   ++G   K    L+ M K  C  +
Sbjct: 61  LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTAN 120

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++Y+ +++G+ + G +  A+ +   M  FG + D    N+LL+GLC       D  EDA
Sbjct: 121 VVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLC-----SADQWEDA 175

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++  KM++                                      +P  +TFN +I  
Sbjct: 176 EELMIKMSQN-----------------------------------DCLPDNVTFNTIISF 200

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           LC +G I +A  +   M E    P+ T+Y  +I  L +  K   A  L      +G
Sbjct: 201 LCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKG 256



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 118/258 (45%), Gaps = 34/258 (13%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
            + + K G   +V  +N ++  +      ++A++  S   S+G  P+  T++ +++  C+
Sbjct: 109 LEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCS 168

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
            + + +A +++  M  N   P+  TF  +++ LC+ G + +A EV  QM   GC PN  T
Sbjct: 169 ADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTT 228

Query: 193 YNCLLKGLCYVGRVEEAYEML----------------------------------MNVKN 218
           Y+ ++ GL   G++E+A E+L                                    +++
Sbjct: 229 YSTIIGGLAKAGKMEQALELLNEMASKGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQD 288

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            G+ P    +  V+   C+ G+++ A+++L + +  G  P+ +T+  L  G   EG   +
Sbjct: 289 SGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQE 348

Query: 279 GVGLLKLMKKRNCLPDKI 296
              L+  +  R+ L + +
Sbjct: 349 ARELVSRLCSRDVLSNSL 366



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 34/229 (14%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++  +++  G    +  +N LL  L   ++ E A +   + S     P++ TF+ +I  
Sbjct: 141 LELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISF 200

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR------ 183
            C K    +A +V   M + G +PN TT++ ++  L K+G++++ALE+L++M        
Sbjct: 201 LCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTD 260

Query: 184 ----------------------------IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
                                        G  P    +N +L  LC  G+ + A ++L +
Sbjct: 261 KMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLAD 320

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           + + G  PD  TY  +++G    G   EA EL++    R V  N +  N
Sbjct: 321 MVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSRDVLSNSLIKN 369



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 75/146 (51%), Gaps = 1/146 (0%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           +  ++F  + + G N + + ++ ++  L    + E A++  +E +S G   +   + ++ 
Sbjct: 209 QAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTDKM-YQLLT 267

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                ++   E  +V+  + D+G  P    F  ++  LC++G+   A++VL  M   GC 
Sbjct: 268 ESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCM 327

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEML 213
           P+  TY  L++GL Y G ++EA E++
Sbjct: 328 PDELTYIILIEGLSYEGYLQEARELV 353



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 38/74 (51%)

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P  +T+N +I A+C EG +D+A  LL  +      P+  +Y+ ++  L  +E+  DA
Sbjct: 11  GCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDA 70

Query: 460 CALYGAALKQGVIP 473
             L    +++   P
Sbjct: 71  EELLDEMVRENCPP 84


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 178/344 (51%), Gaps = 5/344 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           + +F  LL ++  +    T +    +  S+G+ P+ +T +I+I  +C+ N    A  V+ 
Sbjct: 56  IFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLA 115

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   G+ P+  TFT LV  LC  G++ EAL+V D+M   G +PN+ TY  L+ GLC   
Sbjct: 116 KILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDR 175

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           ++ EA  +   +   G+ PD++TY +++   C +        LLNE ++  + PNVV+ N
Sbjct: 176 QLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLN 235

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            + +  CKEG   +   ++ +M +    PD ++Y+ L++G     ++  AV +F  MVR 
Sbjct: 236 IVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRN 295

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   +    N+L+ G C     +   ++ A  +FE+M ++  + +  TY  +I  L    
Sbjct: 296 GCVCNVVSYNTLINGYC-----KIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVG 350

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +  +A+   +  +  G IP  +T++ ++  LC   ++ +A+ LL
Sbjct: 351 RLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALL 394



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 176/358 (49%), Gaps = 5/358 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E +++F  +   G +  +  +N L+ AL  L E +      +E     + PN  
Sbjct: 173 KDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVV 232

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           + +I++   C +    EA  V+D M   G  P+V T+  L++  C    + EA++V D M
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM 292

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R GC  N+ +YN L+ G C + R+++A  +   +    L P+  TY+ ++ G C VGR 
Sbjct: 293 VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRL 352

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L NE +  G  PN+VT++ L +  CK     + + LLK ++  N  PD   Y+  
Sbjct: 353 QDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIA 412

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G+ + G +  A  +F  +   G + D    N ++RGLC     ++ LL++A ++F +M
Sbjct: 413 IDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLC-----KRGLLDEASKLFREM 467

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            +   + +  TY  + + L +  KT  A+  L   +  G      T   +++ L  +G
Sbjct: 468 DENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 190/408 (46%), Gaps = 40/408 (9%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           LN  + A+   ++    G  P++ TF+ ++R  C      EA  V D M   G+ PNV T
Sbjct: 104 LNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVT 163

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV-------------- 203
           +  L+N LCK  +L EAL +  +M   G  P+I TYN L+  LC +              
Sbjct: 164 YGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 223

Query: 204 ---------------------GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
                                G+V EA++++  +   G++PDV TY A+MDG C     +
Sbjct: 224 KSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMD 283

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA+++ +  +  G   NVV++NTL NGYCK     K + L + M ++  +P+ ++YSTL+
Sbjct: 284 EAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLI 343

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +GL   G+++ A+++F EMV  G   +    + LL  LC     +   L +A  + + + 
Sbjct: 344 HGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLC-----KNHRLAEAMALLKAIE 398

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
                 D   Y I I  + +    + A     +    G  P   T N +I+ LC  G +D
Sbjct: 399 GSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLD 458

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +A  L   M E+  + +  +Y+ +   L Q  K+  A  L    L +G
Sbjct: 459 EASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARG 506



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 197/393 (50%), Gaps = 7/393 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E +D+FD +  +G   +V  +  L+  L    +   A+  FSE  + G++P+ +T++ 
Sbjct: 142 IGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNS 201

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   CN  ++     +++ M  +   PNV +  I+V++LCK G++ EA +V+D M + G
Sbjct: 202 LIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGG 261

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +P++ TY  L+ G C    ++EA ++   +  +G   +V +Y  +++G+CK+ R ++AM
Sbjct: 262 VEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAM 321

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  E   + + PN +T++TL +G C  G     + L   M     +P+ ++YS LL+ L
Sbjct: 322 YLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYL 381

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++  A+++ K +     + D ++ N  + G+C         LE A  +F  +  + 
Sbjct: 382 CKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGD-----LEAARDLFSNLAPRG 436

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  T+ I+IR L K    DEA        E G +    T+N + Q L    K  +A+
Sbjct: 437 LQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAI 496

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL--DQLEKS 456
            LL  M         ++  +L+  L  D L++S
Sbjct: 497 QLLEEMLARGFSADVSTTALLVKMLSDDGLDQS 529



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 152/321 (47%), Gaps = 5/321 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +  F  L+ S+ K       L +  +M   G  P++ T   ++   C++ RV+ A  +
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +PD  T+T ++ G C VG+  EA+++ ++ +  G  PNVVT+ TL NG CK
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
           +    + + L   M  +   PD  +Y++L++ L    + +   ++  EMV+     +   
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
           +N ++  LC     ++  + +A+ V + M +     D  TY  ++       + DEA+  
Sbjct: 234 LNIVVDALC-----KEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKV 288

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
               +  G +   +++N +I   C   +IDKA+ L   M     IP+  +Y  LI  L  
Sbjct: 289 FDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCH 348

Query: 453 LEKSYDACALYGAALKQGVIP 473
           + +  DA AL+   +  G IP
Sbjct: 349 VGRLQDAIALFNEMVACGQIP 369



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 130/260 (50%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E + +FD + ++G   +V  +N L+     +   + A+  F E     L PN+ T+
Sbjct: 280 SEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTY 339

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           S +I   C+     +A  + + M   G  PN+ T++IL++ LCK+ RL EA+ +L  +  
Sbjct: 340 STLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEG 399

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P++Q YN  + G+C  G +E A ++  N+   GL+PDV+T+  ++ G CK G  +E
Sbjct: 400 SNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDE 459

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A +L  E  E G   N  T+NT+  G  +     + + LL+ M  R    D  + + L+ 
Sbjct: 460 ASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVK 519

Query: 304 GLLKWGKIRPAVSIFKEMVR 323
            L   G  +    I  E +R
Sbjct: 520 MLSDDGLDQSVKQILCEFMR 539


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 173/357 (48%), Gaps = 5/357 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           LL  ++  N   T   F+SE   YG  P    ++I+I  +C +    +A+ + + +   G
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             P   +F  L+N LCKS  L E   +   M      P++ TY+ L+ GLC  GR++ A 
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           ++   ++  GL+P+  T+TA++DG  +  R + AM   ++ +  GV P++V +NTL NG 
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G   K   L+  MK     PDKI+Y+TL++G  K G +  A+ I K M   G  +D 
Sbjct: 374 CKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 433

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +L+ G C         + DA +   +M +     D  TY +VI    K        
Sbjct: 434 VAFTALISGFC-----RDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGF 488

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             L      GH P  IT+N ++  LC +G++  A +LL  M      P   +Y++L+
Sbjct: 489 KLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILL 545



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 183/347 (52%), Gaps = 12/347 (3%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F+E    GL P + +F+ +I   C   +  E  ++   M +N  +P+V T+++L++ LCK
Sbjct: 246 FNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK 305

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            GRL  A ++ D+M + G +PN  T+  L+ G     R++ A      +   G+KPD+  
Sbjct: 306 EGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVM 365

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  +++G CKVG  N+A +L++E    G+ P+ +T+ TL +GYCKEG     + + K M 
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +   + D ++++ L++G  + G++R A    +EMV  G + D+     ++ G C     +
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYC-----K 480

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
           K  ++  +++ ++M  +++   PG  TY +++  L K  +   A + L   + +G  P  
Sbjct: 481 KGNVKMGFKLLKEM--QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDD 538

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           IT+N +++  C  GK +    LL L  E   I     Y  L+++ ++
Sbjct: 539 ITYNILLEGHCKNGKAED---LLKLRNEKGLIVDYAYYTSLVSEYNK 582



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 152/316 (48%), Gaps = 36/316 (11%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF+ I+K G   +   FN L+  L      +   +         + P+ +T+S++I   C
Sbjct: 245 IFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLC 304

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +     A ++ D M   G  PN  TFT L++   +S R+  A+    QM  +G KP++ 
Sbjct: 305 KEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLV 364

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL---- 247
            YN LL GLC VG V +A +++  +K  G+KPD  TYT ++DG+CK G    AME+    
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 424

Query: 248 -------------------------------LNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                                          L E +E G+ P+  T+  + +GYCK+G  
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 484

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
             G  LLK M+     P  I+Y+ L+NGL K G+++ A  + + M+  G   D+   N L
Sbjct: 485 KMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNIL 544

Query: 337 LRGLCMKSWEEKDLLE 352
           L G C K+ + +DLL+
Sbjct: 545 LEGHC-KNGKAEDLLK 559



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 3/266 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD +++ G   +   F  L+         ++A+  + +  + G+ P+   ++ ++   C
Sbjct: 315 LFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLC 374

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              D  +ARK++D M   G  P+  T+T L++  CK G L+ A+E+   M   G   +  
Sbjct: 375 KVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV 434

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            +  L+ G C  GRV +A   L  +   G+KPD  TYT V+DG+CK G      +LL E 
Sbjct: 435 AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              G  P V+T+N L NG CK+G       LL+ M      PD I+Y+ LL G  K GK 
Sbjct: 495 QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKA 554

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLL 337
              + +  E    G  VD     SL+
Sbjct: 555 EDLLKLRNEK---GLIVDYAYYTSLV 577



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 94/171 (54%), Gaps = 3/171 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E+A++     +  G+  ++  F+ +I  +C      +A + +  M + G  P+  T+T++
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++  CK G +K   ++L +M   G KP + TYN L+ GLC  G+++ A  +L  + N G+
Sbjct: 475 IDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGV 534

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
            PD  TY  +++G CK G++ + ++L N   E+G+  +   + +L + Y K
Sbjct: 535 TPDDITYNILLEGHCKNGKAEDLLKLRN---EKGLIVDYAYYTSLVSEYNK 582



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/212 (21%), Positives = 84/212 (39%), Gaps = 7/212 (3%)

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           F+ L   Y   G     +   +L++  N          LL+ ++         + + E++
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
            +GF    +  N L+   C     ++  + DA  +F ++ K+       ++  +I  L K
Sbjct: 216 EYGFPPKVQYYNILINKFC-----KEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 383 GKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
            +  DE    L   +E   I P   T++ +I  LC EG++D A  L   M +    P+  
Sbjct: 271 SRNLDEGF-RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++  LI    +  +   A   Y   L  GV P
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKP 361


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 207/433 (47%), Gaps = 41/433 (9%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   ++  ++ L+   V L + E A       S  G++ N  T++++I+ YC +    EA
Sbjct: 222 GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEA 281

Query: 140 RKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
            KV+  M +     P+   + +L++  C++G++ +A+ +LD+M R+G K N+   N L+ 
Sbjct: 282 EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLIN 341

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           G C  G + EA  ++  + +  LKPD Y+Y  ++DG+C+ G ++EA  L ++ ++ G+ P
Sbjct: 342 GYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEP 401

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
            V+T+NTL  G C+ G     + +  LM KR   PD++ YSTLL+GL K      A +++
Sbjct: 402 TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLW 461

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           K+++  GF       N+++ GLC     +   + +A ++F+KM       D  TY  +I 
Sbjct: 462 KDILARGFTKSRITFNTMISGLC-----KMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 516

Query: 379 TLGKGKKTDEAL--------------IHLHHAI------------------EM---GHIP 403
              K     +A               I +++++                  EM   G  P
Sbjct: 517 GYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 576

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             +T+  +I   C EG +DKA    F M E+    +      +++ L +L +  +A  L 
Sbjct: 577 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM 636

Query: 464 GAALKQGVIPQRK 476
              +  G  P  +
Sbjct: 637 QKMVDHGFFPDHE 649



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 194/409 (47%), Gaps = 6/409 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K  + +FD++ K G   S+   N LL  LV   E  TA   + +    G+ P+ +  SIM
Sbjct: 139 KNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIM 198

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  +C      EA   +  M + G  PN+ T+  L+N     G ++ A  VL  M   G 
Sbjct: 199 VNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGV 258

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAM 245
             N+ TY  L+KG C   +++EA ++L  ++ +  L PD   Y  ++DG+C+ G+ ++A+
Sbjct: 259 SRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAV 318

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL+E +  G+  N+   N+L NGYCK G   +  G++  M   N  PD  SY+TLL+G 
Sbjct: 319 RLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGY 378

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G    A ++  +M++ G E      N+LL+GLC          +DA Q++  M K+ 
Sbjct: 379 CREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC-----RVGAFDDALQIWHLMMKRG 433

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D   Y  ++  L K +  + A       +  G     ITFN +I  LC  GK+ +A 
Sbjct: 434 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 493

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            +   M +    P   +Y  LI    +      A  + GA  ++ + P 
Sbjct: 494 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPS 542



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 197/434 (45%), Gaps = 27/434 (6%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  ++ D + ++G   +V  +N LL  L  +   + A++ +      G+AP+   +S ++
Sbjct: 386 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLL 445

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                  +F  A  +   +   G+  +  TF  +++ LCK G++ EA E+ D+M  +GC 
Sbjct: 446 DGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 505

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TY  L+ G C    V +A+++   ++ + + P +  Y +++ G  K  R  E  +L
Sbjct: 506 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDL 565

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L E   RG+TPN+VT+  L +G+CKEG   K       M +     + I  ST+++GL +
Sbjct: 566 LTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYR 625

Query: 308 WGKIRPAVSIFKEMVRFGFEVDER---------------------------MMNSLLRGL 340
            G+I  A  + ++MV  GF  D                             + N+++  +
Sbjct: 626 LGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNI 685

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            +    +   ++DA + F  ++ K  V D  TY  +I         DEA       +  G
Sbjct: 686 AIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRG 745

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
            +P  +T+N +I  LC    +D+A  L   +++    P+  +Y+ LI    ++     A 
Sbjct: 746 LVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAF 805

Query: 461 ALYGAALKQGVIPQ 474
            L    +++G+ P 
Sbjct: 806 KLKDKMIEEGISPS 819



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 177/363 (48%), Gaps = 8/363 (2%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           +  +P    F ++++ Y  K     A  V D M   G  P++ +   L+N+L K+G    
Sbjct: 118 FAFSPT--VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 175

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A  V  QM R+G  P++   + ++   C  G+V+EA   +  ++N G++P++ TY ++++
Sbjct: 176 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 235

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL- 292
           G+  +G    A  +L    E+GV+ NVVT+  L  GYCK+    +   +L+ M++   L 
Sbjct: 236 GYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 295

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD+ +Y  L++G  + GKI  AV +  EM+R G + +  + NSL+ G C     ++  + 
Sbjct: 296 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC-----KRGEIH 350

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +A  V  +M       D  +Y  ++    +   T EA       ++ G  P  +T+N ++
Sbjct: 351 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 410

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           + LC  G  D AL +  LM +    P    Y  L+  L ++E    A  L+   L +G  
Sbjct: 411 KGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 470

Query: 473 PQR 475
             R
Sbjct: 471 KSR 473



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 180/439 (41%), Gaps = 72/439 (16%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + AV+   E    GL  N +  + +I  YC + +  EA  VI  M D    P+  ++  L
Sbjct: 315 DDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 374

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++  C+ G   EA  + D+M + G +P + TYN LLKGLC VG  ++A ++   +   G+
Sbjct: 375 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGV 434

Query: 222 KPDVYTYTAVMDGF-----------------------------------CKVGRSNEAME 246
            PD   Y+ ++DG                                    CK+G+  EA E
Sbjct: 435 APDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 494

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           + ++  + G +P+ +T+ TL +GYCK     +   +   M++    P    Y++L++GL 
Sbjct: 495 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF 554

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K  ++     +  EM   G   +     +L+ G     W ++ +L+ A+  + +MT+   
Sbjct: 555 KSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDG-----WCKEGMLDKAFSSYFEMTENGL 609

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH------------------------- 401
             +      ++  L +  + DEA + +   ++ G                          
Sbjct: 610 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 669

Query: 402 -------IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
                  +P  I +N  I  LC  GK+D A     ++     +P   +Y  LI       
Sbjct: 670 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 729

Query: 455 KSYDACALYGAALKQGVIP 473
              +A  L    L++G++P
Sbjct: 730 NVDEAFRLRDEMLRRGLVP 748



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 82/153 (53%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E+    L PN+  ++I I   C      +AR+    +   G+ P+  T+  L++    
Sbjct: 668 LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSA 727

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G + EA  + D+M R G  PNI TYN L+ GLC    V+ A  +   +   GL P+V T
Sbjct: 728 AGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVT 787

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           Y  ++DG+CK+G  + A +L ++ IE G++P++
Sbjct: 788 YNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N  +  L    + + A +FFS  S  G  P+++T+  +I  Y    +  EA ++ D M 
Sbjct: 683 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 742

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PN+ T+  L+N LCKS  +  A  +  ++ + G  PN+ TYN L+ G C +G ++
Sbjct: 743 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 802

Query: 208 EAYEMLMNVKNDGLKPDV 225
            A+++   +  +G+ P +
Sbjct: 803 AAFKLKDKMIEEGISPSI 820



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 44/90 (48%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A +   E    GL PN  T++ +I   C   +   A+++   +   G  PNV T+  L
Sbjct: 732 DEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTL 791

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           ++  CK G +  A ++ D+M   G  P+IQ
Sbjct: 792 IDGYCKIGNMDAAFKLKDKMIEEGISPSIQ 821


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 207/433 (47%), Gaps = 41/433 (9%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   ++  ++ L+   V L + E A       S  G++ N  T++++I+ YC +    EA
Sbjct: 256 GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEA 315

Query: 140 RKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
            KV+  M +     P+   + +L++  C++G++ +A+ +LD+M R+G K N+   N L+ 
Sbjct: 316 EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLIN 375

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           G C  G + EA  ++  + +  LKPD Y+Y  ++DG+C+ G ++EA  L ++ ++ G+ P
Sbjct: 376 GYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEP 435

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
            V+T+NTL  G C+ G     + +  LM KR   PD++ YSTLL+GL K      A +++
Sbjct: 436 TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLW 495

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           K+++  GF       N+++ GLC     +   + +A ++F+KM       D  TY  +I 
Sbjct: 496 KDILARGFTKSRITFNTMISGLC-----KMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550

Query: 379 TLGKGKKTDEAL--------------IHLHHAI------------------EM---GHIP 403
              K     +A               I +++++                  EM   G  P
Sbjct: 551 GYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 610

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             +T+  +I   C EG +DKA    F M E+    +      +++ L +L +  +A  L 
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM 670

Query: 464 GAALKQGVIPQRK 476
              +  G  P  +
Sbjct: 671 QKMVDHGFFPDHE 683



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 194/409 (47%), Gaps = 6/409 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K  + +FD++ K G   S+   N LL  LV   E  TA   + +    G+ P+ +  SIM
Sbjct: 173 KNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIM 232

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  +C      EA   +  M + G  PN+ T+  L+N     G ++ A  VL  M   G 
Sbjct: 233 VNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGV 292

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAM 245
             N+ TY  L+KG C   +++EA ++L  ++ +  L PD   Y  ++DG+C+ G+ ++A+
Sbjct: 293 SRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAV 352

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL+E +  G+  N+   N+L NGYCK G   +  G++  M   N  PD  SY+TLL+G 
Sbjct: 353 RLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGY 412

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G    A ++  +M++ G E      N+LL+GLC          +DA Q++  M K+ 
Sbjct: 413 CREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC-----RVGAFDDALQIWHLMMKRG 467

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D   Y  ++  L K +  + A       +  G     ITFN +I  LC  GK+ +A 
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            +   M +    P   +Y  LI    +      A  + GA  ++ + P 
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPS 576



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 197/434 (45%), Gaps = 27/434 (6%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  ++ D + ++G   +V  +N LL  L  +   + A++ +      G+AP+   +S ++
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLL 479

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                  +F  A  +   +   G+  +  TF  +++ LCK G++ EA E+ D+M  +GC 
Sbjct: 480 DGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 539

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TY  L+ G C    V +A+++   ++ + + P +  Y +++ G  K  R  E  +L
Sbjct: 540 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDL 599

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L E   RG+TPN+VT+  L +G+CKEG   K       M +     + I  ST+++GL +
Sbjct: 600 LTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYR 659

Query: 308 WGKIRPAVSIFKEMVRFGFEVDER---------------------------MMNSLLRGL 340
            G+I  A  + ++MV  GF  D                             + N+++  +
Sbjct: 660 LGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNI 719

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            +    +   ++DA + F  ++ K  V D  TY  +I         DEA       +  G
Sbjct: 720 AIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRG 779

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
            +P  +T+N +I  LC    +D+A  L   +++    P+  +Y+ LI    ++     A 
Sbjct: 780 LVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAF 839

Query: 461 ALYGAALKQGVIPQ 474
            L    +++G+ P 
Sbjct: 840 KLKDKMIEEGISPS 853



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 177/363 (48%), Gaps = 8/363 (2%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           +  +P    F ++++ Y  K     A  V D M   G  P++ +   L+N+L K+G    
Sbjct: 152 FAFSPT--VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 209

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A  V  QM R+G  P++   + ++   C  G+V+EA   +  ++N G++P++ TY ++++
Sbjct: 210 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 269

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL- 292
           G+  +G    A  +L    E+GV+ NVVT+  L  GYCK+    +   +L+ M++   L 
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 329

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD+ +Y  L++G  + GKI  AV +  EM+R G + +  + NSL+ G C     ++  + 
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC-----KRGEIH 384

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +A  V  +M       D  +Y  ++    +   T EA       ++ G  P  +T+N ++
Sbjct: 385 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 444

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           + LC  G  D AL +  LM +    P    Y  L+  L ++E    A  L+   L +G  
Sbjct: 445 KGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 504

Query: 473 PQR 475
             R
Sbjct: 505 KSR 507



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 188/442 (42%), Gaps = 37/442 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +     + + I+  + K G       ++ LL  L  +   E A   + +  + G   +  
Sbjct: 449 RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI 508

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ MI   C      EA ++ D M D G  P+  T+  L++  CK+  + +A +V   M
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R    P+I+ YN L+ GL    R+ E  ++L  +   GL P++ TY A++DG+CK G  
Sbjct: 569 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK-------------- 287
           ++A     E  E G++ N++  +T+ +G  + G   +   L++ M               
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 688

Query: 288 ------------------KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
                             K   LP+ I Y+  + GL K GK+  A   F  +   GF  D
Sbjct: 689 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                +L+ G     +     +++A+++ ++M ++  V +  TY  +I  L K +  D A
Sbjct: 749 NFTYCTLIHG-----YSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 803

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
               H   + G  P  +T+N +I   C  G +D A  L   M E    PS  +Y  LI  
Sbjct: 804 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALING 863

Query: 450 LDQLEKSYDACALYGAALKQGV 471
           L +      +  L    +K GV
Sbjct: 864 LCKHGDIERSMKLLNQMIKAGV 885



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 179/439 (40%), Gaps = 72/439 (16%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + AV+   E    GL  N +  + +I  YC + +  EA  VI  M D    P+  ++  L
Sbjct: 349 DDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 408

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++  C+ G   EA  + D+M + G +P + TYN LLKGLC VG  ++A ++   +   G+
Sbjct: 409 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGV 468

Query: 222 KPDVYTYTAVMDGF-----------------------------------CKVGRSNEAME 246
            PD   Y+ ++DG                                    CK+G+  EA E
Sbjct: 469 APDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 528

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           + ++  + G +P+ +T+ TL +GYCK     +   +   M++    P    Y++L++GL 
Sbjct: 529 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF 588

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K  ++     +  EM   G        N +  G  +  W ++ +L+ A+  + +MT+   
Sbjct: 589 KSRRLVEVTDLLTEMGIRGLTP-----NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH------------------------- 401
             +      ++  L +  + DEA + +   ++ G                          
Sbjct: 644 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 703

Query: 402 -------IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
                  +P  I +N  I  LC  GK+D A     ++     +P   +Y  LI       
Sbjct: 704 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763

Query: 455 KSYDACALYGAALKQGVIP 473
              +A  L    L++G++P
Sbjct: 764 NVDEAFRLRDEMLRRGLVP 782



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 113/214 (52%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E+    L PN+  ++I I   C      +AR+    +   G+ P+  T+  L++    
Sbjct: 702 LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSA 761

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G + EA  + D+M R G  PNI TYN L+ GLC    V+ A  +   +   GL P+V T
Sbjct: 762 AGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVT 821

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++DG+CK+G  + A +L ++ IE G++P+VVT++ L NG CK G   + + LL  M 
Sbjct: 822 YNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMI 881

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           K       I Y TL+ G ++ G+++    ++  M
Sbjct: 882 KAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 111/205 (54%), Gaps = 1/205 (0%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N  +  L    + + A +FFS  S  G  P+++T+  +I  Y    +  EA ++ D M 
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PN+ T+  L+N LCKS  +  A  +  ++ + G  PN+ TYN L+ G C +G ++
Sbjct: 777 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 836

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A+++   +  +G+ P V TY+A+++G CK G    +M+LLN+ I+ GV   ++ + TL 
Sbjct: 837 AAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLV 896

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCL 292
            GY + G   K   L  +M  R CL
Sbjct: 897 QGYIRSGEMQKIHKLYDMMHIR-CL 920



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/423 (21%), Positives = 173/423 (40%), Gaps = 62/423 (14%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  I   G   S   FN ++  L  + +   A + F +    G +P+  T+  +I  YC
Sbjct: 494 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYC 553

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             ++  +A KV   M      P++  +  L++ L KS RL E  ++L +MG  G  PNI 
Sbjct: 554 KASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIV 613

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+ G C  G +++A+     +  +GL  ++   + ++ G  ++GR +EA  L+ + 
Sbjct: 614 TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM 673

Query: 252 IERG--------------------------------VTPNVVTFNTLFNGYCKEGTPMKG 279
           ++ G                                + PN + +N    G CK G     
Sbjct: 674 VDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDA 733

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
                ++  +  +PD  +Y TL++G    G +  A  +  EM+R G   +    N+L+ G
Sbjct: 734 RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALING 793

Query: 340 LC-----------MKSWEEKDL-------------------LEDAYQVFEKMTKKVSVTD 369
           LC                +K L                   ++ A+++ +KM ++     
Sbjct: 794 LCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 853

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  +I  L K    + ++  L+  I+ G   + I +  ++Q     G++ K   L  
Sbjct: 854 VVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYD 913

Query: 430 LMY 432
           +M+
Sbjct: 914 MMH 916



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 156/366 (42%), Gaps = 72/366 (19%)

Query: 44  DLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQE 102
           DL  +P  +  +  +D   KAS + +   +  +++++  + S+  +N L+  L       
Sbjct: 535 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLV 594

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNK-------NDFFE------ARKVIDC---- 145
                 +E    GL PN  T+  +I  +C +       + +FE      +  +I C    
Sbjct: 595 EVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMV 654

Query: 146 ------------------MFDNGYHP--------------------------------NV 155
                             M D+G+ P                                N 
Sbjct: 655 SGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNN 714

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
             + I +  LCK+G++ +A      +   G  P+  TY  L+ G    G V+EA+ +   
Sbjct: 715 IVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 774

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +   GL P++ TY A+++G CK    + A  L ++  ++G+ PNVVT+NTL +GYCK G 
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN- 334
                 L   M +    P  ++YS L+NGL K G I  ++ +  +M++ G  VD +++  
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAG--VDSKLIEY 892

Query: 335 -SLLRG 339
            +L++G
Sbjct: 893 CTLVQG 898



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 82/157 (52%), Gaps = 2/157 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + E   + D + + G   ++  +N L+  L      + A + F +    GL PN  T
Sbjct: 762 AGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVT 821

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  YC   +   A K+ D M + G  P+V T++ L+N LCK G ++ ++++L+QM 
Sbjct: 822 YNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMI 881

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEM--LMNVK 217
           + G    +  Y  L++G    G +++ +++  +M+++
Sbjct: 882 KAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIR 918


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 219/484 (45%), Gaps = 34/484 (7%)

Query: 21  NKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDG 80
           +K   F +L +  A +    ++LD          + F +  K   LKE +++   ++  G
Sbjct: 132 SKFRHFMRLYIVCATTFLNNDNLDRATEVMQCMVRSFSEIGK---LKEAVNMVIEMQNHG 188

Query: 81  TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEAR 140
                   N ++   + L   + A K F E     + P+S ++ +M+  YC      +  
Sbjct: 189 LVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVD 248

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           + +  M + GY  +  T T+++++  + G +  A     +  ++G  PN+  ++ L+ GL
Sbjct: 249 RWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGL 308

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-GVTPN 259
           C +G +++A+EML  +   G KP+VYT+TA++DG CK G + +A  L  + +      PN
Sbjct: 309 CKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPN 368

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           V T+  + NGYCKE    +   LL  MK++  +P+  +Y+ L++G  K G    A  +  
Sbjct: 369 VYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMD 428

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSW--EEKDLL-------------------------- 351
            M + GF  +    N+++ GLC K    E   LL                          
Sbjct: 429 LMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQT 488

Query: 352 --EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
             + A  +F +M K     D  TY ++I T  + KK +E+      A+ +G +P   T+ 
Sbjct: 489 DNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYT 548

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           ++I   C +G I  A+     M ++   P   +Y  LI+ L    K  +AC LY   +  
Sbjct: 549 SMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDN 608

Query: 470 GVIP 473
           G+ P
Sbjct: 609 GLSP 612



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 177/385 (45%), Gaps = 10/385 (2%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G N ++ +F+ L+  L  +   + A +   E    G  PN +T + +I   C K    +A
Sbjct: 293 GLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKA 352

Query: 140 -RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
            R  +  +  + Y PNV T+T ++N  CK  +L  A  +L +M   G  PN  TY CL+ 
Sbjct: 353 FRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLID 412

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           G C  G    AYE++  +  +G  P+++TY A++DG CK GR  EA +LL   ++ G+  
Sbjct: 413 GHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHA 472

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           + VT+  L + +C++    + + +   M K    PD  +Y+ L+    +  K+  +  +F
Sbjct: 473 DKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLF 532

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           +E V  G    +    S++ G C         +  A + F KM       D  TYG +I 
Sbjct: 533 EEAVGLGLLPTKETYTSMICGYC-----RDGHISSAIKFFHKMRDYGCKPDSITYGALIS 587

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L    K DEA       I+ G  P  +T   +    C +G  D A  ++ L     K+ 
Sbjct: 588 GLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQG--DSATAMIILERLEKKLW 645

Query: 439 SRTSYDMLITKLDQLEKSYDACALY 463
            RT  + LI KL   EK     AL+
Sbjct: 646 IRT-VNTLIRKLCS-EKKVGVAALF 668



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 171/388 (44%), Gaps = 45/388 (11%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP  +     ++ + K   +K+  ++ + + + G   +V     L+  L      E A +
Sbjct: 295 NPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFR 354

Query: 107 FFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
            F +   S    PN +T++ MI  YC +     A  ++  M + G  PN  T+T L++  
Sbjct: 355 LFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGH 414

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM-----NVKND- 219
           CK+G    A E++D MG+ G  PNI TYN ++ GLC  GR  EAY++L       +  D 
Sbjct: 415 CKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADK 474

Query: 220 -----------------------------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
                                        GL+PD++TY  ++  FC+  +  E+ +L  E
Sbjct: 475 VTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEE 534

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
           A+  G+ P   T+ ++  GYC++G     +     M+   C PD I+Y  L++GL    K
Sbjct: 535 AVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESK 594

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A  +++ M+  G    E    +L    C +      ++     + E++ KK+ +   
Sbjct: 595 LDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMI-----ILERLEKKLWIR-- 647

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIE 398
            T   +IR L   KK   A +  H  ++
Sbjct: 648 -TVNTLIRKLCSEKKVGVAALFFHKLLD 674



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 155/339 (45%), Gaps = 6/339 (1%)

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A KV D M D    P+ T++ ++V   C+ GR+ +    L  M   G   +  T   ++ 
Sbjct: 212 AEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMIS 271

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
                G V  A+         GL P++  ++++++G CK+G   +A E+L E + +G  P
Sbjct: 272 TFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKP 331

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGL-LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           NV T   L +G CK+G   K   L LKL++  N  P+  +Y+ ++NG  K  K+  A  +
Sbjct: 332 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEML 391

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
              M   G   +      L+ G C     +      AY++ + M K+    +  TY  +I
Sbjct: 392 LIRMKEQGLVPNTNTYTCLIDGHC-----KAGNFGRAYELMDLMGKEGFTPNIFTYNAII 446

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L K  +  EA   L   ++ G     +T+  +I   C +    +AL +   M++    
Sbjct: 447 DGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQ 506

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           P   +Y++LI    + +K  ++  L+  A+  G++P ++
Sbjct: 507 PDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKE 545



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 130/268 (48%), Gaps = 3/268 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA       ++ D + K+G   ++  +N ++  L        A K        GL  +  
Sbjct: 416 KAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKV 475

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I  +C + D  +A  +   MF  G  P++ T+ +L+ + C+  +++E+ ++ ++ 
Sbjct: 476 TYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEA 535

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G  P  +TY  ++ G C  G +  A +    +++ G KPD  TY A++ G C   + 
Sbjct: 536 VGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKL 595

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA +L    I+ G++P  VT  TL   YCK+G     + +L+ ++K+  +    + +TL
Sbjct: 596 DEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIR---TVNTL 652

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           +  L    K+  A   F +++     VD
Sbjct: 653 IRKLCSEKKVGVAALFFHKLLDKDLNVD 680


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 220/494 (44%), Gaps = 69/494 (13%)

Query: 48  NPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        +D  IK   ++E + I D +   G   +V  +N ++  +    E   A+ 
Sbjct: 343 NPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMS 402

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F+E    G+ P++WT++++I  Y   +D  +A +++  M      P+  T+++L++ LC
Sbjct: 403 LFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLC 462

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTY--------------------------------- 193
            S  L++A EVLDQM R G KPN+  Y                                 
Sbjct: 463 HSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLF 522

Query: 194 --NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
             NCL+ GLC   +VEEA  +L+++   G+KP+ +TY A ++ + K G    A     + 
Sbjct: 523 CYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDM 582

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  G+ PN V +  L  G+C  G  ++ +   K M ++  +PD  +YS +++ L K GK 
Sbjct: 583 LSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKT 642

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL--------------------- 350
           + A+ +F + ++ G   D  + NSL+ G C +   EK                       
Sbjct: 643 KEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTL 702

Query: 351 -----------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
                      L +A+++F++M  K    D   Y I+I   GK    ++AL  L H  + 
Sbjct: 703 INDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKAL-SLFHEAQQ 761

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
             +     FN++I + C  GK+ +A  L   M +    P+  +Y +LI    + E   +A
Sbjct: 762 KSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEA 821

Query: 460 CALYGAALKQGVIP 473
             L+     + +IP
Sbjct: 822 EQLFLDMETRNIIP 835



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 171/359 (47%), Gaps = 5/359 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL P+  T+++++  +C +    EA+ + + M  +G +PN  T+T L++   K G ++EA
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L + D+M   G K N+ TYN ++ G+   G + +A  +   +   G++PD +TY  ++DG
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDG 425

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           + K     +A ELL E   R +TP+  T++ L +G C      K   +L  M +    P+
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
              Y TL+   ++  +   A+ + K M+  G   D    N L+ GLC         +E+A
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC-----RAKKVEEA 540

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
             +   M +K    +  TYG  I    K  +   A  +    +  G +P  + +  +I+ 
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKG 600

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            C  G   +AL     M E   IP   +Y  +I  L +  K+ +A  ++   LK GV+P
Sbjct: 601 HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVP 659



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 165/356 (46%), Gaps = 5/356 (1%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN +T++  I   C      EA +V   M + G  P+  T+T+LV+  CK  R KEA  +
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
            + M   G  PN  TY  L+ G    G +EEA  +   +   GLK +V TY A++ G  K
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G   +AM L NE +  G+ P+  T+N L +GY K     K   LL  MK R   P   +
Sbjct: 394 AGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           YS L++GL     ++ A  +  +M+R G +      N  + G  +K++ ++   E A ++
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKP-----NVFMYGTLIKAYVQESRYEMAIEL 508

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            + M     + D   Y  +I  L + KK +EA + L    E G  P   T+   I     
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            G+I  A      M     +P+   Y +LI     +  + +A + +   L++G+IP
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP 624



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 193/409 (47%), Gaps = 7/409 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE   IF+S+   G N +   +  L+   +     E A++   E  + GL  N  T++ M
Sbjct: 328 KEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAM 387

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I       +  +A  + + M   G  P+  T+ +L++   KS  + +A E+L +M     
Sbjct: 388 IGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P+  TY+ L+ GLC+   +++A E+L  +  +G+KP+V+ Y  ++  + +  R   A+E
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           LL   I  GV P++  +N L  G C+     +   LL  M ++   P+  +Y   +N   
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G+I+ A   FK+M+  G   +  +   L++G C    +  + +E A   F+ M +K  
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHC----DVGNTVE-ALSTFKCMLEKGL 622

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           + D   Y  +I +L K  KT EA+      ++ G +P    +N++I   C EG I+KA  
Sbjct: 623 IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQ 682

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKS--YDACALYGAALKQGVIP 473
           L   M  +   P+   Y+ LI      +     +A  L+   + +G+ P
Sbjct: 683 LYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISP 731



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 191/387 (49%), Gaps = 46/387 (11%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           E + A ++F +  S G+ PN+  ++I+I+ +C+  +  EA     CM + G  P++  ++
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYS 630

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            +++SL K+G+ KEA+ V  +  + G  P++  YN L+ G C  G +E+A ++   + ++
Sbjct: 631 AIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690

Query: 220 GLKPDVYTYTAVMD--GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           G+ P++  Y  +++  G+CK G   EA +L +E I +G++P+   +  L +G  KEG   
Sbjct: 691 GINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 750

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM-NSL 336
           K + L    ++++ +    ++++L++   K GK+  A  +F +MV      D+++  N +
Sbjct: 751 KALSLFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMV------DKKLTPNIV 803

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMT-------------------------KKVSV---- 367
              + + ++ + +++E+A Q+F  M                          K +S+    
Sbjct: 804 TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDM 863

Query: 368 ------TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  D   YG++     K  K+ EAL  L+ ++  G       F+ +I  LC E +I
Sbjct: 864 EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQI 923

Query: 422 DKALLLLFLM-YEHAKIPSRTSYDMLI 447
              L LL  M  E   + S+T   +L+
Sbjct: 924 STVLELLSEMGKEELSLSSKTCNTLLL 950



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 157/370 (42%), Gaps = 39/370 (10%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY---- 193
           EA  V       G+ P +     L+  L K+  +    +V   M      P++ TY    
Sbjct: 190 EASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVI 249

Query: 194 ------------------------------NCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
                                         N  + GLC  G V+EA E+   +   GL P
Sbjct: 250 KAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGP 309

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D +TYT ++DGFCK  RS EA  +       G+ PN  T+  L +G+ KEG   + + + 
Sbjct: 310 DGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIK 369

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M  R    + ++Y+ ++ G+ K G++  A+S+F EM+  G E D    N L+ G  +K
Sbjct: 370 DEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGY-LK 428

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           S +    +  A ++  +M  +     P TY ++I  L       +A   L   I  G  P
Sbjct: 429 SHD----MAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
               +  +I+A   E + + A+ LL +M  +  +P    Y+ LI  L + +K  +A  L 
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544

Query: 464 GAALKQGVIP 473
               ++G+ P
Sbjct: 545 VDMGEKGIKP 554



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 161/356 (45%), Gaps = 12/356 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    KE + +F    K G    V  +N L+       + E A + + E    G+ PN  
Sbjct: 638 KNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIV 697

Query: 122 TFSIMIR--CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            ++ +I    YC   +  EA K+ D M   G  P+   + IL++   K G L++AL +  
Sbjct: 698 VYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFH 757

Query: 180 --QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
             Q   +G   ++  +N L+   C  G+V EA E+  ++ +  L P++ TYT ++D + K
Sbjct: 758 EAQQKSVG---SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGK 814

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
                EA +L  +   R + PN +T+ +L   Y + G   K + L K M+ R    D I+
Sbjct: 815 AEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIA 874

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y  + +   K GK   A+ +  + +  G ++++ + ++L+  LC    +EK  +    ++
Sbjct: 875 YGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC----KEKQ-ISTVLEL 929

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
             +M K+       T   ++    K    DEA   L     +G +P +++  + I 
Sbjct: 930 LSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS 985



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 6/320 (1%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N+T F I ++     G L EA  V       G  P +   N L++ L     +   +++ 
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
            ++    + PDVYTYT V+   CKVG   +   +L+E +E+   PN+ T+N    G C+ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSE-MEKECKPNLFTYNAFIGGLCQT 289

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   + + + KLM ++   PD  +Y+ L++G  K  + + A  IF+ M   G   +    
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            +L+ G       ++  +E+A ++ ++M  +    +  TY  +I  + K  +  +A+   
Sbjct: 350 TALIDGFI-----KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLF 404

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
           +  +  G  P T T+N +I        + KA  LL  M      PS  +Y +LI+ L   
Sbjct: 405 NEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHS 464

Query: 454 EKSYDACALYGAALKQGVIP 473
                A  +    ++ GV P
Sbjct: 465 SDLQKANEVLDQMIRNGVKP 484



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 6/167 (3%)

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G +  A S+F   +  GF       N+L+R L      + +++   ++V+  M +   V 
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLL-----KANMMGLFWKVYGSMVEAKIVP 240

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  TY  VI+   K     +  + L   +E    P   T+N  I  LC  G +D+AL + 
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSE-MEKECKPNLFTYNAFIGGLCQTGAVDEALEVK 299

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            LM E    P   +Y +L+    + ++S +A  ++ +    G+ P R
Sbjct: 300 KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 189/403 (46%), Gaps = 5/403 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           + FD +K  G    V   ND+L   +  N  E A   ++E     +  +  TF+IMI   
Sbjct: 142 ECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVL 201

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +    +A++ I  M   G  PNV T+  +++  C  GR++ A  + D M   G KP+ 
Sbjct: 202 CKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDS 261

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY   + G+C  G++EEA  ML  +K  GL+P   TY  ++DG+C  G    A +  ++
Sbjct: 262 YTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDK 321

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G+ P V T+N L +    +    +  G++K M ++  +PD ++Y+ L+NG  + G 
Sbjct: 322 MVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGN 381

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           ++ A ++  EM+  G +       SL+  L      ++  ++ A  +FEK+ +K    D 
Sbjct: 382 VKKAFTLHDEMISKGIQPTRVTYTSLIYVL-----SKRGRMKQADDLFEKIVRKGIFPDL 436

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             +  +I         D A   L    +M  +P  +TFN ++Q  C EGK++ A  L+  
Sbjct: 437 IMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEE 496

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M      P   SY+ LI+   +     DA  +    L  G  P
Sbjct: 497 MKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNP 539



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 191/390 (48%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV  FN ++  L    + + A +F     + G+ PN  T++ +I  YC++     AR + 
Sbjct: 190 SVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIF 249

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M   G  P+  T+   ++ +CK G+L+EA  +L++M  IG +P   TYN L+ G C  
Sbjct: 250 DLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNK 309

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G +E A++    +  +GL P V TY  ++       + +EA  ++ E  E+G+ P+ VT+
Sbjct: 310 GNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTY 369

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N L NGYC+ G   K   L   M  +   P +++Y++L+  L K G+++ A  +F+++VR
Sbjct: 370 NILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVR 429

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D  M N+L+ G C         ++ A+ + ++M +   V D  T+  +++   + 
Sbjct: 430 KGIFPDLIMFNALIDGHCANGN-----MDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCRE 484

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            K + A   +      G  P  I++N +I      G +  A  +   M      P+  +Y
Sbjct: 485 GKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTY 544

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + LI  L + E+   A  L    + +G+ P
Sbjct: 545 NALIQGLCKNEEGDHAEQLLKEMISKGITP 574



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 162/334 (48%), Gaps = 6/334 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S     F+  + K   L+E   + + +K+ G   +   +N L+         E A  +
Sbjct: 259 PDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDY 318

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             +    GL P   T++++I          EA  +I  M + G  P+  T+ IL+N  C+
Sbjct: 319 RDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCR 378

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G +K+A  + D+M   G +P   TY  L+  L   GR+++A ++   +   G+ PD+  
Sbjct: 379 CGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIM 438

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           + A++DG C  G  + A  +L E  +  V P+ VTFNTL  G C+EG       L++ MK
Sbjct: 439 FNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMK 498

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            R   PD ISY+TL++G  K G ++ A  +  EM+  GF       N+L++GLC    EE
Sbjct: 499 SRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKN--EE 556

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
            D    A Q+ ++M  K    +  TY  +I  +G
Sbjct: 557 GD---HAEQLLKEMISKGITPNDNTYLSLIEGIG 587



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 137/318 (43%), Gaps = 40/318 (12%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           + +L+ + C+  R  +A E  D M   G  P++   N +L       R E+A+ +   + 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
              +K  V T+  +++  CK G+  +A E +      G+ PNVVT+NT+ +GYC  G   
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
               +  LMK R   PD  +Y + ++G+ K GK+  A  + ++M   G        N+L+
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            G C      K  LE A+   +KM ++                                 
Sbjct: 304 DGYC-----NKGNLEMAFDYRDKMVRE--------------------------------- 325

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             G +P   T+N +I AL  + K+D+A  ++  M E   +P   +Y++LI    +     
Sbjct: 326 --GLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVK 383

Query: 458 DACALYGAALKQGVIPQR 475
            A  L+   + +G+ P R
Sbjct: 384 KAFTLHDEMISKGIQPTR 401


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 193/414 (46%), Gaps = 5/414 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++  +D+   +++ G   S   FN L+  L    E + A     E +  GL  + +
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  YC K    EA  + + M   G  P V +   ++   CK G++ +A + L  M
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +    P+I +YN L+ G C +G + EA+ +L  ++   L  ++ TY  ++DG C++G  
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A++L  + I RG+ P+VVT+  L NG CK G  +        M      PD+ +Y+  
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G LK G    A  + +EM+  GF  D    N  + GLC     +   LE+A ++ +KM
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLC-----KLGNLEEAGELLQKM 543

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +   V D  TY   +    +     E     +  +  G  P  +T+  +I A    G++
Sbjct: 544 IRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRL 603

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           D A+     M E   +P+  +Y++LI    ++ K   AC  +    ++G+ P +
Sbjct: 604 DWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNK 657



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 204/433 (47%), Gaps = 32/433 (7%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ + ++     V + N +L  L   N    A++ +     YG+ P   T++ M+  +C
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +   A  ++  M + G +P+  TF +L+N L K G L++A  ++ +M + G + +  
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G C  G + EA  +   +   G+ P V ++  +M GFCK G+ ++A + L++ 
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++ + P+++++NTL  G+C+ G   +   LL  ++ RN   + ++Y+TL++GL + G +
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLED---------------- 353
             A+ + ++M+  G   D      L+ G C        K+  ++                
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488

Query: 354 ------------AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                       A+++ E+M  K    D  TY + +  L K    +EA   L   I  GH
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGH 548

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD-AC 460
           +P  +T+ + + A    G + +   + + M    + P+  +Y +LI     L    D A 
Sbjct: 549 VPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLI-HAHALNGRLDWAM 607

Query: 461 ALYGAALKQGVIP 473
           A +    ++GV+P
Sbjct: 608 AYFLEMQEKGVVP 620



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 155/323 (47%), Gaps = 7/323 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   + D ++    ++++  +N L+  L  L + ETA+K   +  + G+ P+  T+++
Sbjct: 393 IGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTV 452

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C   +   A++  D M   G  P+   +T  +    K G   +A ++ ++M   G
Sbjct: 453 LVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKG 512

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ TYN  + GLC +G +EEA E+L  +  DG  PD  TYT+ M    + G   E  
Sbjct: 513 FPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGR 572

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+  + + RG TP VVT+  L + +   G     +     M+++  +P+ I+Y+ L+NG 
Sbjct: 573 EIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGF 632

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKK 364
            K  K+  A   F EM   G   ++     L+   C M  W+E      A +++ +M  K
Sbjct: 633 CKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQE------ALRLYAQMLGK 686

Query: 365 VSVTDPGTYGIVIRTLGKGKKTD 387
               D  T+G +++ L K  K  
Sbjct: 687 RIRPDSCTHGALLKKLDKDYKVQ 709



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 152/350 (43%), Gaps = 11/350 (3%)

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           ++I  Y N    ++   V + M  N + P+V     ++  L     L +ALEV   MG  
Sbjct: 176 VLIGGYLN----YQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEY 231

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G +P + TYN +L   C  G V+ A +++  ++  G  P   T+  +++G  K G   +A
Sbjct: 232 GIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQA 291

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L+ E  + G+  +  T+N L  GYCK+G  ++ + L + M  R   P   S++T++ G
Sbjct: 292 KGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYG 351

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTK 363
             K GK+  A     +M++     D    N+L+ G C + +  E  +L D  + F  ++ 
Sbjct: 352 FCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELR-FRNLSF 410

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
            +      TY  +I  L +    + AL      I  G  P  +T+  ++   C  G +  
Sbjct: 411 NIV-----TYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLM 465

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A      M      P + +Y   I    +L  +  A  L    L +G  P
Sbjct: 466 AKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPP 515



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 1/255 (0%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           + FD +   G       +   ++  + L +   A K   E  + G  P+  T+++ +   
Sbjct: 468 EFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGL 527

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +  EA +++  M  +G+ P+  T+T  +++  ++G L+E  E+   M   G  P +
Sbjct: 528 CKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTV 587

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  L+      GR++ A    + ++  G+ P+V TY  +++GFCKV + ++A +   E
Sbjct: 588 VTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIE 647

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             E+G+ PN  T+  L N  C  G   + + L   M  +   PD  ++  LL  L K  K
Sbjct: 648 MQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYK 707

Query: 311 IRPAVSIFKEMVRFG 325
           ++ AV   + ++  G
Sbjct: 708 VQ-AVQFIESLILDG 721



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 99/212 (46%)

Query: 56  RFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           R V  +K     +   + + +   G    V  +N  +  L  L   E A +   +    G
Sbjct: 488 RIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDG 547

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
             P+  T++  +  +       E R++   M   G  P V T+T+L+++   +GRL  A+
Sbjct: 548 HVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAM 607

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
               +M   G  PN+ TYN L+ G C V ++++A +  + ++  G+ P+ YTYT +++  
Sbjct: 608 AYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINEN 667

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           C +G+  EA+ L  + + + + P+  T   L 
Sbjct: 668 CNMGKWQEALRLYAQMLGKRIRPDSCTHGALL 699


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 203/415 (48%), Gaps = 8/415 (1%)

Query: 37  LSTAESLDLKENPRSLQ-AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMAL 95
           L   E+L LK N  +     R + R  A  + E  +I   +  +G    V  +  L+ AL
Sbjct: 248 LKEMETLGLKPNVYTFTICIRVLGR--AGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 305

Query: 96  VMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV 155
               + + A + F++  +    P+  T+  ++  + +  D     +    M  +G+ P+V
Sbjct: 306 CTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDV 365

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
            TFTILV++LCK+G   EA   LD M   G  PN+ TYN L+ GL  V R+++A E+  N
Sbjct: 366 VTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDN 425

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +++ G+KP  YTY   +D + K G S  A+E   +   +G+ PN+V  N       K G 
Sbjct: 426 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 485

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   +   +K    +PD ++Y+ ++    K G+I  A+ +  EMV    E D  ++NS
Sbjct: 486 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNS 545

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+  L      + D +++A+++F +M +        TY  ++  LGK  K  EA+     
Sbjct: 546 LINTL-----YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 600

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            ++ G  P TITFN +   LC   ++  AL +LF M +   +P   +Y+ +I  L
Sbjct: 601 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 655



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 149/305 (48%), Gaps = 7/305 (2%)

Query: 71   DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
            D+F  +K  G    V+ +N LL A     + +   + + E S++   PN+ T +I+I   
Sbjct: 808  DVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGL 867

Query: 131  CNKNDFFEARKVI-DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
                +  +A  +  D M D  + P   T+  L++ L KSGRL EA ++ + M   GC+PN
Sbjct: 868  VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPN 927

Query: 190  IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
               YN L+ G    G  + A  +   +  +G++PD+ TY+ ++D  C VGR +E +    
Sbjct: 928  CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFR 987

Query: 250  EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK-RNCLPDKISYSTLLNGLLKW 308
            E  E G+ P+VV +N + NG  K     + + L   MKK R   PD  +Y++L+  L   
Sbjct: 988  ELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIA 1047

Query: 309  GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
            G +  A  I+ E+ R G E +    N+L+RG  +    E      AY V++ M       
Sbjct: 1048 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH-----AYAVYQTMVTGGFSP 1102

Query: 369  DPGTY 373
            + GTY
Sbjct: 1103 NTGTY 1107



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 173/390 (44%), Gaps = 30/390 (7%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+  T+S ++     + D      ++  M   G  PNV TFTI +  L ++G++ EA
Sbjct: 220 GFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 279

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            E+L +M   GC P++ TY  L+  LC   +++ A E+   +K    KPD  TY  ++D 
Sbjct: 280 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDR 339

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           F      +   +  +E  + G  P+VVTF  L +  CK G   +    L +M+ +  LP+
Sbjct: 340 FSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPN 399

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFG------------------------FEVDE 330
             +Y+TL+ GLL+  ++  A+ IF  M   G                         E  E
Sbjct: 400 LHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 459

Query: 331 RMM------NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           +M       N +     + S  +     +A Q+F  +     V D  TY ++++   K  
Sbjct: 460 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 519

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + DEA+  L   +E    P  I  N++I  L    ++D+A  +   M E    P+  +Y+
Sbjct: 520 EIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 579

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            L+  L +  K  +A  L+   +++G  P 
Sbjct: 580 TLLAGLGKNGKIQEAIELFEGMVQKGCPPN 609



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 154/334 (46%), Gaps = 7/334 (2%)

Query: 115  GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
            G+ P   T++++I      +    A+ V   + + G  P+V T+  L+++  KSG++ E 
Sbjct: 782  GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDEL 841

Query: 175  LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMD 233
             E+  +M    C+PN  T+N ++ GL   G V++A ++  ++ +D    P   TY  ++D
Sbjct: 842  FEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 901

Query: 234  GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
            G  K GR  EA +L     + G  PN   +N L NG+ K G       L K M K    P
Sbjct: 902  GLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 961

Query: 294  DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
            D  +YS L++ L   G++   +  F+E+   G   D    N ++ GL      +   LE+
Sbjct: 962  DLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGL-----GKFHRLEE 1016

Query: 354  AYQVFEKMTKKVSVT-DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A  +F +M K   +T D  TY  +I  LG     +EA    +     G  P   TFN +I
Sbjct: 1017 ALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1076

Query: 413  QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +     GK + A  +   M      P+  +Y+ L
Sbjct: 1077 RGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 137/547 (25%), Positives = 219/547 (40%), Gaps = 120/547 (21%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           ESL +K  P +     F+D   K+      ++ F+ +K  G   ++   N  L +L    
Sbjct: 427 ESLGVK--PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 484

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
               A + F      GL P+S T+++M++CY    +  EA K++  M +N   P+V    
Sbjct: 485 RDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVN 544

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV--- 216
            L+N+L K+ R+ EA ++  +M  +  KP + TYN LL GL   G+++EA E+   +   
Sbjct: 545 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 604

Query: 217 -----------------KND---------------GLKPDVYTYTAVMDGFCKVGRSNEA 244
                            KND               G  PDV+TY  ++ G  K G+  EA
Sbjct: 605 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 664

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLN 303
           M   ++ +++ V P+ VT  TL  G  K G       ++   +      P  + +  L+ 
Sbjct: 665 MCFFHQ-MKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMG 723

Query: 304 GLLKWGKIRPAVS----------------IFKEMVRFGFEVDE----RMM---------- 333
            +L    I  AVS                I   ++R+ F+ +     RM+          
Sbjct: 724 SILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGV 783

Query: 334 -------NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
                  N L+ GL      E D++E A  VF ++     + D  TY  ++   GK  K 
Sbjct: 784 QPKLPTYNLLIGGLL-----EADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKI 838

Query: 387 DEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLF-LMYEHAKIPSRTSYD 444
           DE L  ++  +      P TIT N VI  L   G +D AL L + LM +    P+  +Y 
Sbjct: 839 DE-LFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 897

Query: 445 MLITKLDQLEKSYDA-----------------------------------CALYGAALKQ 469
            LI  L +  + Y+A                                   CAL+   +K+
Sbjct: 898 PLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 957

Query: 470 GVIPQRK 476
           GV P  K
Sbjct: 958 GVRPDLK 964



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 176/365 (48%), Gaps = 7/365 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA    E     D ++  G   ++  +N L+  L+ ++  + A++ F    S G+ P ++
Sbjct: 377 KAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAY 436

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ + I  Y    D   A +  + M   G  PN+      + SL K+GR +EA ++   +
Sbjct: 437 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 496

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             IG  P+  TYN ++K    VG ++EA ++L  +  +  +PDV    ++++   K  R 
Sbjct: 497 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRV 556

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA ++     E  + P VVT+NTL  G  K G   + + L + M ++ C P+ I+++TL
Sbjct: 557 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 616

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            + L K  ++  A+ +  +M+  G   D    N+++ GL +K+ + K    +A   F +M
Sbjct: 617 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL-VKNGQVK----EAMCFFHQM 671

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEAL-IHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            KK+   D  T   ++  + K    ++A  I  +        P  + + +++ ++  E  
Sbjct: 672 -KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAG 730

Query: 421 IDKAL 425
           ID A+
Sbjct: 731 IDNAV 735



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 180/391 (46%), Gaps = 9/391 (2%)

Query: 88   FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            + DL+ +++     + AV F     + G+  +  +  + I  Y  K++     +++   F
Sbjct: 718  WEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKF 777

Query: 148  --DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
              D G  P + T+ +L+  L ++  ++ A +V  Q+   GC P++ TYN LL      G+
Sbjct: 778  TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGK 837

Query: 206  VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI-ERGVTPNVVTFN 264
            ++E +E+   +     +P+  T+  V+ G  K G  ++A++L  + + +R  +P   T+ 
Sbjct: 838  IDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 897

Query: 265  TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
             L +G  K G   +   L + M    C P+   Y+ L+NG  K G+   A ++FK MV+ 
Sbjct: 898  PLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 957

Query: 325  GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
            G   D +  + L+  LCM        +++    F ++ +     D   Y ++I  LGK  
Sbjct: 958  GVRPDLKTYSVLVDCLCMVGR-----VDEGLHYFRELKESGLNPDVVCYNLIINGLGKFH 1012

Query: 385  KTDEALIHLHHAIE-MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + +EAL+  +   +  G  P   T+N++I  L   G +++A  +   +      P+  ++
Sbjct: 1013 RLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1072

Query: 444  DMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            + LI       K   A A+Y   +  G  P 
Sbjct: 1073 NALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1103



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 2/245 (0%)

Query: 61   IKASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
            +KA  + + +D++  +  D   + +   +  L+  L        A + F   S YG  PN
Sbjct: 868  VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPN 927

Query: 120  SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
               ++I+I  +    +   A  +   M   G  P++ T+++LV+ LC  GR+ E L    
Sbjct: 928  CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFR 987

Query: 180  QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMDGFCKV 238
            ++   G  P++  YN ++ GL    R+EEA  +   +K   G+ PD+YTY +++      
Sbjct: 988  ELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIA 1047

Query: 239  GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
            G   EA ++ NE    G+ PNV TFN L  GY   G P     + + M      P+  +Y
Sbjct: 1048 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1107

Query: 299  STLLN 303
              L N
Sbjct: 1108 EQLPN 1112



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 153/381 (40%), Gaps = 6/381 (1%)

Query: 95  LVMLNEQETAVKFF-SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
           L+   + +++  +F S A +  L   + T + M+          E   V D M       
Sbjct: 94  LMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKR 153

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           +  T+  +   L   G L++A   L +M   G   N  +YN L+  L       EA E+ 
Sbjct: 154 DTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 213

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +  DG +P + TY+++M G  K       M LL E    G+ PNV TF        + 
Sbjct: 214 RRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRA 273

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +   +LK M    C PD ++Y+ L++ L    K+  A  +F +M     + D    
Sbjct: 274 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTY 333

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            +LL       + +   L+   Q + +M K   V D  T+ I++  L K     EA   L
Sbjct: 334 ITLL-----DRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKL 388

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
               + G +P   T+N +I  L    ++D AL +   M      P+  +Y + I    + 
Sbjct: 389 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKS 448

Query: 454 EKSYDACALYGAALKQGVIPQ 474
             S  A   +     +G+ P 
Sbjct: 449 GDSVSALETFEKMKTKGIAPN 469


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 201/420 (47%), Gaps = 48/420 (11%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +F+S+       +  +FN +L +LV      T +    +    G+ PN  TF+I+I C
Sbjct: 53  VSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINC 112

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C       A  V+  +   GY P++ T    +   C  G++ +AL   D++  +G   +
Sbjct: 113 FCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLD 172

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVK------------------------NDG----- 220
             +Y  L+ GLC VG    A ++L  V                         ND      
Sbjct: 173 QVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYS 232

Query: 221 ------LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
                 + PDV TY+A++ GF  VG+  +A++L N+ I   + P+V TFN L +G+CKEG
Sbjct: 233 EMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEG 292

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              K   +L +M  ++  P+  +++TL++G  K  K++   ++F  M++ G + +     
Sbjct: 293 RLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYC 352

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL---I 391
           SL+ G C+     K     A ++F  M+++    +  +Y I+I    K KK D+A+   I
Sbjct: 353 SLMDGYCLVKQVNK-----AKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFI 407

Query: 392 HLHHAIEMGH-IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            +HH     H IP  +T+N++I  LC  GKI  A  L+  M++  + P+  +Y+ ++  L
Sbjct: 408 EMHHK----HIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNAL 463



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 135/244 (55%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   +SE  +  ++P+  T+S +IR +       +A  + + M      P+V TF ILV+
Sbjct: 227 AFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVD 286

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             CK GRLK+A  VLD M     KPN+ T+N L+ G C   +++E   +   +   G+KP
Sbjct: 287 GFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKP 346

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V TY ++MDG+C V + N+A ++ N   +RGVT NV ++N + NG+CK     K + L 
Sbjct: 347 NVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLF 406

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M  ++ +PD ++Y++L++GL K GKI  A  +  EM   G   +    NS+L  L  K
Sbjct: 407 IEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTK 466

Query: 344 SWEE 347
             ++
Sbjct: 467 LKDQ 470



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 156/304 (51%), Gaps = 17/304 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  D++  +     +  V  ++ L+    ++ + + A+  F++     + P+ +
Sbjct: 220 KDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVY 279

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I++  +C +    +A+ V+D M      PNV+TF  LV+  CK  ++KE   V   M
Sbjct: 280 TFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMM 339

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G KPN+ TY  L+ G C V +V +A ++   +   G+  +V++Y  +++GFCK+ + 
Sbjct: 340 MKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKV 399

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++AM+L  E   + + P+VVT+N+L +G CK G       L+  M  R   P+ I+Y+++
Sbjct: 400 DKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSI 459

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           LN LL   K +            G + +      L++GLC     +   LE A +VFE +
Sbjct: 460 LNALLTKLKDQ------------GIQPNMHTDTILIKGLC-----QSGKLEAARKVFEDL 502

Query: 362 TKKV 365
             K+
Sbjct: 503 LVKI 506



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 169/375 (45%), Gaps = 5/375 (1%)

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
           N+ + AV  F+          ++ F+ ++        +     +   M   G +PN  TF
Sbjct: 47  NDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTF 106

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
            IL+N  C+ G +  A  VL ++ ++G +P+I T N  +KG C  G++ +A      +  
Sbjct: 107 NILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVA 166

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            G   D  +Y  +++G CKVG +  A++LL     + V  N V +NT+ +G  K+     
Sbjct: 167 LGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVND 226

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              L   M  +   PD ++YS L+ G    GK++ A+ +F +M+    + D    N L+ 
Sbjct: 227 AFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVD 286

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           G C     ++  L+ A  V + M  +    +  T+  ++    K +K  E        ++
Sbjct: 287 GFC-----KEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMK 341

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G  P  +T+ +++   C   +++KA  +   M +     +  SY+++I    +++K   
Sbjct: 342 QGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDK 401

Query: 459 ACALYGAALKQGVIP 473
           A  L+     + +IP
Sbjct: 402 AMKLFIEMHHKHIIP 416


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 191/386 (49%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+     +N  + A +      S   +P++ T++IMI   C++     A KV++ + 
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +   P V T+TIL+ +    G + EAL+++D+M   G KP++ TYN +++G+C  G V+
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A+EM+ N++  G +PDV +Y  ++      G+  E  +L+ +       PNVVT++ L 
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              C++G   + + LLKLMK++   PD  SY  L+    + G++  A+   + M+  G  
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    N++L  LC     ++     A ++F K+ +     +  +Y  +   L       
Sbjct: 401 PDIVNYNTVLATLCKNGKADQ-----ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            AL  +   +  G  P  IT+N++I  LC EG +D+A  LL  M      PS  +Y++++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +  +  DA  +  + +  G  P
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRP 541



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 175/382 (45%), Gaps = 38/382 (9%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + + +  D    +V  +  L+ A ++    + A+K   E  S GL P+ +T++ +IR 
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C +     A +++  +   G  P+V ++ IL+ +L   G+ +E  +++ +M    C PN
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY+ L+  LC  G++EEA  +L  +K  GL PD Y+Y  ++  FC+ GR + A+E L 
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             I  G  P++V +NT+    CK G   + + +   + +  C P+  SY+T+ + L   G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------------MKSWE--------- 346
               A+ +  EM+  G + DE   NS++  LC              M+S E         
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512

Query: 347 -------EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
                  +   +EDA  V E M       +  TY ++I  +G      EA+   +  + +
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572

Query: 400 GHIP--------RTITFNNVIQ 413
             I         RT    NV+Q
Sbjct: 573 DAISEYSFKRLHRTFPLLNVLQ 594



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 169/347 (48%), Gaps = 14/347 (4%)

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   ++ E+  +++ M   GY+P+V   T L+        + +A+ V++ + + G +P++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             YN L+ G C + R+++A  +L  +++    PD  TY  ++   C  G+ + A+++LN+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +     P V+T+  L      EG   + + L+  M  R   PD  +Y+T++ G+ K G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSV-T 368
           +  A  + + +   G E D    N LLR L  +  WEE + L         MTK  S   
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL---------MTKMFSEKC 329

Query: 369 DPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           DP   TY I+I TL +  K +EA+  L    E G  P   +++ +I A C EG++D A+ 
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L  M     +P   +Y+ ++  L +  K+  A  ++G   + G  P
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 41/314 (13%)

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           C+SG   E+L +L+ M R G  P++     L+KG   +  + +A  ++  ++  G +PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           + Y A+++GFCK+ R ++A  +L+    +  +P+ VT+N +    C  G     + +L  
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           +   NC P  I+Y+ L+   +  G +  A+ +  EM+  G + D                
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD---------------- 262

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                      +F             TY  +IR + K    D A   + +    G  P  
Sbjct: 263 -----------MF-------------TYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           I++N +++AL  +GK ++   L+  M+     P+  +Y +LIT L +  K  +A  L   
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358

Query: 466 ALKQGVIPQRKPQD 479
             ++G+ P     D
Sbjct: 359 MKEKGLTPDAYSYD 372



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 6/182 (3%)

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +F+  C+ G  ++ + LL+ M ++   PD I  + L+ G      I  AV + + + +FG
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            + D    N+L+ G C     + + ++DA +V ++M  K    D  TY I+I +L    K
Sbjct: 155 -QPDVFAYNALINGFC-----KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D AL  L+  +     P  IT+  +I+A   EG +D+AL L+  M      P   +Y+ 
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268

Query: 446 LI 447
           +I
Sbjct: 269 II 270


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 217/482 (45%), Gaps = 34/482 (7%)

Query: 26   FNKLVVFAAASLSTAESLDLKEN-PRSLQAQRFVDR--IKASPLKERIDIFDSIKKDGTN 82
            F K   F    L TA+SL    N  ++ +  R + R   +   L E + +   ++  G  
Sbjct: 721  FEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLT 780

Query: 83   WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
             S    N +L   V L   E A   F E S  G+ P+S ++ +M+          EA + 
Sbjct: 781  PSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRW 840

Query: 143  IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
            +  M   G+ P+  T T+++ +LC++G +  A+    +M  +G KPN+  +  L+ GLC 
Sbjct: 841  LTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 900

Query: 203  VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV-TPNVV 261
             G +++A+EML  +  +G KP+VYT+TA++DG CK G + +A  L  + +      PNV 
Sbjct: 901  KGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVH 960

Query: 262  TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            T+ ++  GYCKE    +   L   MK++   P+  +Y+TL+NG  K G    A  +   M
Sbjct: 961  TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLM 1020

Query: 322  VRFGFEVDERMMNSLLRGLCMKSW--EEKDLLEDAYQ----------------------- 356
               GF  +    N+ +  LC KS   E  +LL  A+                        
Sbjct: 1021 GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI 1080

Query: 357  -----VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
                  F +M K     D     I+I    + KK  E+       + +G IP   T+ ++
Sbjct: 1081 NQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSM 1140

Query: 412  IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
            I   C EG ID AL     M  H  +P   +Y  LI+ L +     +AC LY A + +G+
Sbjct: 1141 ISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 1200

Query: 472  IP 473
             P
Sbjct: 1201 SP 1202



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 181/408 (44%), Gaps = 10/408 (2%)

Query: 43   LDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
            +DL   P  +     +D + K   +K+  ++ + + ++G   +V     L+  L      
Sbjct: 880  IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 939

Query: 102  ETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
            E A + F +   S    PN  T++ MI  YC ++    A  +   M + G  PNV T+T 
Sbjct: 940  EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 999

Query: 161  LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
            L+N  CK+G    A E+++ MG  G  PNI TYN  +  LC   R  EAYE+L    + G
Sbjct: 1000 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 1059

Query: 221  LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
            L+ D  TYT ++   CK    N+A+       + G   ++   N L   +C++    +  
Sbjct: 1060 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 1119

Query: 281  GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
             L +L+     +P K +Y+++++   K G I  A+  F  M R G   D     SL+ GL
Sbjct: 1120 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 1179

Query: 341  CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            C KS     ++++A +++E M  +       T   +     K   +  A+I L   ++  
Sbjct: 1180 CKKS-----MVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMI-LLEPLDKK 1233

Query: 401  HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
               RT+    +++ LC E K+  A L    + E      R +     T
Sbjct: 1234 LWIRTV--RTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTT 1279


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 208/428 (48%), Gaps = 8/428 (1%)

Query: 37  LSTAESLDLKENPRSLQ-AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMAL 95
           L   ESL LK N  +     R + R  A  + E   I   ++ DG    V  +  L+ AL
Sbjct: 252 LEEMESLGLKPNIYTYTICIRVLGR--AGRIDEACRIMKRMEDDGCGPDVVTYTVLIDAL 309

Query: 96  VMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV 155
               + + A++ F +  +    P+  T+  M+  + +  D    ++    M  +GY P+V
Sbjct: 310 CTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDV 369

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
            TFTILVN+LCK+G + EA  +LD M + G  PN+ TYN L+ GL  V R+++A ++  N
Sbjct: 370 ITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNN 429

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           ++  G+ P  YTY   +D + K GRS++A+E   +   RG+ PN+V  N       + G 
Sbjct: 430 METLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGR 489

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   +   +K     PD ++Y+ ++    K G++  A+ +  +M     E D  ++NS
Sbjct: 490 LREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINS 549

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+  L      +   +++A+++F ++          TY  +I  LGK  +   A+     
Sbjct: 550 LINTL-----YKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFAS 604

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
               G  P TITFN ++  LC   ++D AL +L+ M     +P   +++ +I  L   ++
Sbjct: 605 MTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKR 664

Query: 456 SYDACALY 463
             DA  L+
Sbjct: 665 VSDAIWLF 672



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 196/435 (45%), Gaps = 36/435 (8%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           F  +++ G + +   +N L+  L+       A++ +      GL P+  TFS ++     
Sbjct: 182 FGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGK 241

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           + D    + +++ M   G  PN+ T+TI +  L ++GR+ EA  ++ +M   GC P++ T
Sbjct: 242 RRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVT 301

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y  L+  LC  G++++A E+ + +K    KPD  TY  ++D F   G      E  +E  
Sbjct: 302 YTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEME 361

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
             G  P+V+TF  L N  CK G   +   LL +M+K+  LP+  +Y+TL++GLL+  ++ 
Sbjct: 362 ADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLD 421

Query: 313 PAVSIFKEMVRFG------------------------FEVDERMMNSLLRGLC------- 341
            A+ +F  M   G                         E  E+M    +RG+        
Sbjct: 422 DALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMK---IRGIAPNIVACN 478

Query: 342 --MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
             + S  E   L +A  +F ++       D  TY ++++   K  + DEA+  L    E 
Sbjct: 479 ASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSEN 538

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
              P  I  N++I  L   G++D+A  +   + +    P+  +Y+ LI  L +  +   A
Sbjct: 539 QCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRA 598

Query: 460 CALYGAALKQGVIPQ 474
             L+ +    G  P 
Sbjct: 599 MELFASMTGNGCPPN 613



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 197/457 (43%), Gaps = 76/457 (16%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E   + D ++K G   ++  +N L+  L+ +N  + A+  F+   + G+ P ++
Sbjct: 381 KAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAY 440

Query: 122 TFSIMIRCY---------------------------CNKNDFF--------EARKVIDCM 146
           T+ + I  Y                           CN + +         EA+ + + +
Sbjct: 441 TYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRL 500

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
             NG  P+  T+ +++    K+G++ EA+E+L  M    C+P+I   N L+  L   GRV
Sbjct: 501 KSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRV 560

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA++M   +K+  L P V TY  ++ G  K G+   AMEL       G  PN +TFNT+
Sbjct: 561 DEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTI 620

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV---- 322
            +  CK       + +L  M   NC+PD ++++T+++GL+   ++  A+ +F +M     
Sbjct: 621 LDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLT 680

Query: 323 -------------------------------RFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
                                          R G  VD R    L+ G+  ++  EK +L
Sbjct: 681 PDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTIL 740

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL-IHLHHAIEMGHIPRTITFNN 410
                V  ++ K  SV  P     +I+ L K K+   A  + +    E+G  P   ++N 
Sbjct: 741 FGDRLVCGRVCKDGSVLMP-----IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNF 795

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +I+   G    + A  L   M      P   +Y++L+
Sbjct: 796 LIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLL 832



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 154/327 (47%), Gaps = 8/327 (2%)

Query: 98   LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
            L  Q   ++F  E    G+ P   +++ +I  +   ++   A  +   M + G  P+V T
Sbjct: 771  LVAQSVFIRFTKE---LGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFT 827

Query: 158  FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
            + +L+++  KSG++ E  E+ +QM    CKPN  T+N ++  L     +++A ++  ++ 
Sbjct: 828  YNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLV 887

Query: 218  NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
            +    P   TY  ++DG  K GR  EA EL  E ++ G  PN   +N L NG+ K G   
Sbjct: 888  SGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVN 947

Query: 278  KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
                L K M +    PD  SY++L+  L + G++  A+  F+++ + G  +D    N ++
Sbjct: 948  TACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMI 1007

Query: 338  RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
             GL          +E+A  ++++M  +    D  TY  +I  LG     ++A        
Sbjct: 1008 DGL-----GRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQ 1062

Query: 398  EMGHIPRTITFNNVIQALCGEGKIDKA 424
             +G  P   T+N +I+     G  D A
Sbjct: 1063 FIGLEPNVFTYNALIRGYSMSGNSDSA 1089



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 157/332 (47%), Gaps = 5/332 (1%)

Query: 77   KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
            K+ G   ++  +N L+   + ++  E A   F+E  + G AP+ +T+++++  +      
Sbjct: 782  KELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKI 841

Query: 137  FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
             E  ++ + M  +   PN  T  I++ +L KS  L +AL++   +      P   TY  L
Sbjct: 842  NELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPL 901

Query: 197  LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
            L GL   GR+EEA E+   + + G +P+   Y  +++GF K G  N A EL    +  G+
Sbjct: 902  LDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961

Query: 257  TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
             P++ ++ +L    C+ G     +   + +K+     D I+Y+ +++GL +  +I  A++
Sbjct: 962  RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021

Query: 317  IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
            ++ EM   G   D    NSL+  L +       ++E A +++E++       +  TY  +
Sbjct: 1022 LYDEMQSRGINPDLFTYNSLILNLGVAG-----MVEQAGKLYEELQFIGLEPNVFTYNAL 1076

Query: 377  IRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
            IR       +D A       +  G  P T TF
Sbjct: 1077 IRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 119/243 (48%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            +K++ L + +D+F  +     + +   +  LL  L+     E A + F E   YG  PN+
Sbjct: 871  VKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNN 930

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
              ++I+I  +    D   A ++   M   G  P++ ++T LV  LC++GR+ +AL   ++
Sbjct: 931  AIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEK 990

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            + + G   +   YN ++ GL    R+EEA  +   +++ G+ PD++TY +++      G 
Sbjct: 991  LKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGM 1050

Query: 241  SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              +A +L  E    G+ PNV T+N L  GY   G       + K M    C P+  +++ 
Sbjct: 1051 VEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQ 1110

Query: 301  LLN 303
            L N
Sbjct: 1111 LPN 1113



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 99/452 (21%), Positives = 184/452 (40%), Gaps = 43/452 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E I++   + ++     +   N L+  L      + A K F       LAP   
Sbjct: 521 KAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVV 580

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I     +     A ++   M  NG  PN  TF  +++ LCK+  +  AL++L +M
Sbjct: 581 TYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKM 640

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             + C P++ T+N ++ GL    RV +A  +   +K   L PD  T   ++ G  K G  
Sbjct: 641 TTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKK-MLTPDCVTLCTLLPGVVKNGLM 699

Query: 242 NEAMELLNEAIER---------------GVTPNVVTFNTLFNG-------YCKEGTPMKG 279
            +A ++  + + R               G+     T  T+  G        CK+G+ +  
Sbjct: 700 EDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMP 759

Query: 280 V---------------GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           +                 ++  K+    P   SY+ L+ G L       A ++F EM   
Sbjct: 760 IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D    N LL      +  +   + + ++++E+M       +  T+ I+I  L K  
Sbjct: 820 GCAPDVFTYNLLL-----DAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSN 874

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             D+AL   +  +     P   T+  ++  L   G++++A  L   M ++   P+   Y+
Sbjct: 875 SLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYN 934

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           +LI    +      AC L+   +++G+ P  K
Sbjct: 935 ILINGFGKTGDVNTACELFKRMVREGIRPDLK 966



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 124/264 (46%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K+  + E  ++++ +       +    N ++  LV  N  + A+  F +  S   +P   
Sbjct: 837  KSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPC 896

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T+  ++          EA+++ + M D G  PN   + IL+N   K+G +  A E+  +M
Sbjct: 897  TYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRM 956

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             R G +P++++Y  L+  LC  GRV++A      +K  GL  D   Y  ++DG  +  R 
Sbjct: 957  VREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRI 1016

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             EA+ L +E   RG+ P++ T+N+L       G   +   L + ++     P+  +Y+ L
Sbjct: 1017 EEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNAL 1076

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFG 325
            + G    G    A +++K M+  G
Sbjct: 1077 IRGYSMSGNSDSAYAVYKRMMVGG 1100



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 129/314 (41%), Gaps = 41/314 (13%)

Query: 161  LVNSLCKSGRLKEALEVLDQMGR-IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            ++  LCK  +   A  V  +  + +G KP +++YN L++G   V   E A+ +   +KN 
Sbjct: 760  IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819

Query: 220  GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            G  PDV+TY  ++D   K G+ NE  EL  + I     PN +T N +     K  +  K 
Sbjct: 820  GCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKA 879

Query: 280  VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
            + L   +   +  P   +Y  LL+GLLK G+                             
Sbjct: 880  LDLFYDLVSGDFSPTPCTYGPLLDGLLKSGR----------------------------- 910

Query: 340  LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
                       LE+A ++FE+M       +   Y I+I   GK    + A       +  
Sbjct: 911  -----------LEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVRE 959

Query: 400  GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
            G  P   ++ +++  LC  G++D AL     + +        +Y+++I  L +  +  +A
Sbjct: 960  GIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEA 1019

Query: 460  CALYGAALKQGVIP 473
              LY     +G+ P
Sbjct: 1020 LTLYDEMQSRGINP 1033



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 5/321 (1%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           ++ T+ I+   L   G L++      +M   G   N  +YN L+  L   G   EA EM 
Sbjct: 158 DLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMY 217

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +  +GLKP + T++A+M    K   +     LL E    G+ PN+ T+        + 
Sbjct: 218 RRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRA 277

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +   ++K M+   C PD ++Y+ L++ L   GK+  A+ +F +M     + D    
Sbjct: 278 GRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTY 337

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            ++L       + +   L    + + +M       D  T+ I++  L K    DEA   L
Sbjct: 338 ITML-----DKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLL 392

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
               + G +P   T+N +I  L    ++D AL L   M     +P+  +Y + I    + 
Sbjct: 393 DVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKS 452

Query: 454 EKSYDACALYGAALKQGVIPQ 474
            +S  A   +     +G+ P 
Sbjct: 453 GRSDKALETFEKMKIRGIAPN 473



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 128/304 (42%), Gaps = 5/304 (1%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           R+ + + V + M     K ++ TY  + KGL   G + +       ++  G   + Y+Y 
Sbjct: 139 RVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYN 198

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++    + G   EA+E+    +  G+ P++ TF+ L     K         LL+ M+  
Sbjct: 199 GLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESL 258

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P+  +Y+  +  L + G+I  A  I K M   G   D      L+  LC        
Sbjct: 259 GLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGK---- 314

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            L+DA ++F KM       D  TY  ++                      G+ P  ITF 
Sbjct: 315 -LDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFT 373

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            ++ ALC  G ID+A  LL +M +   +P+  +Y+ LI+ L ++ +  DA  L+      
Sbjct: 374 ILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETL 433

Query: 470 GVIP 473
           GV+P
Sbjct: 434 GVVP 437


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 197/408 (48%), Gaps = 7/408 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     +  DG    V  +N L+  L        A K F   +  GL P   T+  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG HPN   F+IL+ +  K G++ +A+ V  +M + G 
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P+  TY  ++  LC  GRVE+A      + ++ L P    Y +++   C   + ++A E
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E ++RG+  + + FN++ + +CKEG  ++   L  LM +    PD I+YSTL++G  
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A  +   MV  G + D    N+L+ G C  S      +EDA  +F +M     
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR-----MEDALVLFREMESSGV 580

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY I+++ L + ++T  A        E G      T+N ++  LC     D+AL 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 427 LLF-LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   L     ++ +RT ++++I  L ++ ++ +A  L+ A    G++P
Sbjct: 641 MFQNLCLTDLQLETRT-FNIMIGALLKVGRNDEAKDLFAALSANGLVP 687



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 205/429 (47%), Gaps = 18/429 (4%)

Query: 58  VDRIKASPL-------KERIDIFDSIKKDGTNW----SVSDFNDLLMALVMLNEQETAVK 106
           VD I  +PL       K   D  D + +  T      +V  +N LL  L   N  + A++
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183

Query: 107 FFSEASSYG--LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
                   G    P+  +++ +I  +  + D  +A      M D G  PNV T++ ++ +
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           LCK+  + +A+EVL  M + G  PN +TYN ++ G C  G+ +EA   L  + +DG++PD
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V TY ++MD  CK GR  EA ++ +   +RG+ P + T+ TL  GY  +G  ++  GLL 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           LM +    P+   +S L+    K GK+  A+ +F +M + G   D     +++  LC   
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC--- 420

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
             +   +EDA + FE+M  +        Y  +I +L    K D+A   +   ++ G    
Sbjct: 421 --KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
           TI FN++I + C EG++ ++  L  LM      P   +Y  LI       K  +A  L  
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 465 AALKQGVIP 473
           + +  G+ P
Sbjct: 539 SMVSVGMKP 547



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 205/412 (49%), Gaps = 20/412 (4%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N   +A V  +    AV  ++  +  G   + PN  T+ I+I 
Sbjct: 41  VFDELLRRGRGASIYGLN-CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIG 99

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
             C           +  +   G+  +   FT L+  LC   R  +A++ VL +M ++GC 
Sbjct: 100 SCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCI 159

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDGFCKVGRSNEAM 245
           PN+ +YN LLKGLC   R +EA E+L  + +DG    PDV +YT V++GF K G  ++A 
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
              +E ++RG+ PNVVT++++    CK     K + +L  M K   +P+  +Y+++++G 
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+ + A+   K+M   G E D    NSL+  LC     +     +A ++F+ MTK+ 
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC-----KNGRCTEARKMFDSMTKRG 334

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGKI 421
              +  TYG    TL +G  T  AL+ +H  +++    G  P    F+ +I A   +GK+
Sbjct: 335 LKPEITTYG----TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           D+A+L+   M +    P   +Y  +I  L +  +  DA   +   + + + P
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 171/383 (44%), Gaps = 40/383 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FDS+ K G    ++ +  LL                      G+ PN + FSI+I  Y 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    +A  V   M   G +P+  T+  ++  LCKSGR+++A+   +QM      P   
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGL------------------------------ 221
            YN L+  LC   + ++A E+++ + + G+                              
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 222 -----KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                KPD+ TY+ ++DG+C  G+ +EA +LL   +  G+ P+ VT+NTL NGYCK    
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
              + L + M+     PD I+Y+ +L GL +  +   A  ++  +   G +++    N +
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           L GLC     + +L ++A ++F+ +       +  T+ I+I  L K  + DEA       
Sbjct: 626 LHGLC-----KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680

Query: 397 IEMGHIPRTITFNNVIQALCGEG 419
              G +P   T++ + + L  +G
Sbjct: 681 SANGLVPDVRTYSLMAENLIEQG 703



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 188/384 (48%), Gaps = 10/384 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + +F  +++ G N     +  ++  L      E A+++F +     L+P + 
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C  + + +A+++I  M D G   +   F  +++S CK GR+ E+ ++ D M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            RIG KP+I TY+ L+ G C  G+++EA ++L ++ + G+KPD  TY  +++G+CK+ R 
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L  E    GV+P+++T+N +  G  +         L   + +     +  +Y+ +
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLEDAYQVFE 359
           L+GL K      A+ +F+ +     +++ R  N ++  L    ++ E KDL       F 
Sbjct: 626 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL-------FA 678

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            ++    V D  TY ++   L +    +E         E G    +   N++++ L   G
Sbjct: 679 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738

Query: 420 KIDKALLLLFLMYE-HAKIPSRTS 442
            I +A   LF++ E H  + + T+
Sbjct: 739 DITRAGTYLFMIDEKHFSLEASTA 762



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 149/343 (43%), Gaps = 47/343 (13%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC---KPNIQTYN 194
           +AR V D +   G   ++      +  + +      A+   ++M R G     PN+ TY 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEAIE 253
            L+   C  GR++  +  L NV   G + D   +T ++ G C   R+++AM++ L    +
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR--NCLPDKISYSTLLNGLLKWGKI 311
            G  PNV ++N L  G C E    + + LL++M     +C PD +SY+T++NG  K G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD- 214

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
                                                  L+ AY  + +M  +  + +  
Sbjct: 215 ---------------------------------------LDKAYGTYHEMLDRGILPNVV 235

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L K +  D+A+  L   ++ G +P   T+N+++   C  G+  +A+  L  M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +     P   +Y+ L+  L +  +  +A  ++ +  K+G+ P+
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 72/163 (44%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +++  I + GT   +S +N +L  L   N  + A++ F       L   + TF+IMI   
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 664

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
                  EA+ +   +  NG  P+V T++++  +L + G L+E  ++   M   GC  N 
Sbjct: 665 LKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANS 724

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           +  N +++ L   G +  A   L  +       +  T +  +D
Sbjct: 725 RMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 181/373 (48%), Gaps = 10/373 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A K F +    G  P++ T++ +I  +   +   EARK++D M   G  P   T+  +V+
Sbjct: 452 ACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVH 511

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             CK   + EA EV+ QM   GC+P +  +  LL      GR EEAY++L  +   G  P
Sbjct: 512 GFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP 571

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV  YT+++D     GR  EA  + +  IE+G  P+ +T+ T+   + K G       +L
Sbjct: 572 DVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEIL 631

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           +LM K    PD  +Y++L++G +K  ++  A  ++  MV  G + +    N L+ GL   
Sbjct: 632 ELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKD 691

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGT---YGIVIRTLGKGKKTDEALIHLHHAIEMG 400
              ++     A+ +F++M +K  V  P T   Y I+I  LGK  +  EA       I+ G
Sbjct: 692 GKTDR-----AFSLFKEMLEKDEV--PPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRG 744

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
            IP   T+ ++I +L   G+I +A  L+  M +    P   +Y  LIT L        A 
Sbjct: 745 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAW 804

Query: 461 ALYGAALKQGVIP 473
            ++   +K+G  P
Sbjct: 805 DVFQEMMKRGCAP 817



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 203/447 (45%), Gaps = 47/447 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + + I++F  +   G   ++  +N ++  L  +++ + A KFF+     G  P+  
Sbjct: 32  KARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVI 91

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  +C          +++      + P+V  +T +++  CK+G L    ++L++M
Sbjct: 92  AFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEM 150

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P+   Y  L+  LC +GRV+EAYE+   ++  G   D  T+  +++     G+ 
Sbjct: 151 LAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKL 210

Query: 242 NEAMELLNEAIERGVTPNV-----------------------------------VTFNTL 266
           +EA EL  E IERG  P +                                   V +N+L
Sbjct: 211 DEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSL 270

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +GYCK G    G+ LL  M + +  PD  +Y+ L+ G  +  ++  A+ +FK +  +G 
Sbjct: 271 MDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGC 330

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + +     ++++GL      +   +E+A   F++    +S      Y  VI+ L   K+ 
Sbjct: 331 KPNAATYTTIIQGL-----YDAQRMEEAKAFFDEALDVIS------YTTVIKGLADSKRI 379

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           DEA          G  P  + +  VI  L   G+I+  L     M   + +P+RT+Y ++
Sbjct: 380 DEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVV 439

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I  L + +   DAC ++   +++G +P
Sbjct: 440 IDGLCKAQMLPDACKVFEQMVQKGCVP 466



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 185/374 (49%), Gaps = 6/374 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A + F +  + G +PN   ++ +I          +  K  + M  +   P  TT+T++
Sbjct: 380 DEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVV 439

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ LCK+  L +A +V +QM + GC P+  TY  L+ G     +++EA ++L  +   G 
Sbjct: 440 IDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGP 499

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +P   TY +++ GFCK+   NEA E++ +  ERG  P +  F +L + Y  +G   +   
Sbjct: 500 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQ 559

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +L  M  R C PD I Y++L++ L   G++  A  +F  M+  G   D     +L  G  
Sbjct: 560 VLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPD-----ALTYGTI 614

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
           ++++ +   +E A ++ E M K     D   Y  ++    K ++ D+A       +  G 
Sbjct: 615 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 674

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI-PSRTSYDMLITKLDQLEKSYDAC 460
            P  +TFN ++  L  +GK D+A  L   M E  ++ P+  SY +LI  L +  +  +A 
Sbjct: 675 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAF 734

Query: 461 ALYGAALKQGVIPQ 474
           + +   + +G+IP+
Sbjct: 735 SQFQEMIDRGIIPE 748



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 178/389 (45%), Gaps = 11/389 (2%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  +N L+      N  + A++ F   SSYG  PN+ T++ +I+   +     EA+   D
Sbjct: 299 IQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD 358

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
              D      V ++T ++  L  S R+ EA E+ +++   GC PN+  Y  ++ GL   G
Sbjct: 359 EALD------VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R+E+  +   ++      P   TYT V+DG CK     +A ++  + +++G  P+ +T+ 
Sbjct: 413 RIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYT 472

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL +G+ K     +   LL +M  +   P  ++Y ++++G  K   I  A  +  +M   
Sbjct: 473 TLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRER 532

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G E    +  SLL       +  K   E+AYQV  +MT +    D   Y  +I  L    
Sbjct: 533 GCEPGLFIFTSLL-----SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTG 587

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           +  EA       IE G  P  +T+  +IQ     G ++ A  +L LM +    P   +Y+
Sbjct: 588 RVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYN 647

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            L+    +LE+   A  +Y   +  G+ P
Sbjct: 648 SLMDGYVKLERVDQAFGVYDRMVASGIKP 676



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 194/409 (47%), Gaps = 6/409 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E  ++F+ +K  G + +V  +  ++  L+     E  +K F + S     P   T+++
Sbjct: 379 IDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTV 438

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A KV + M   G  P+  T+T L++   K+ ++ EA ++LD M   G
Sbjct: 439 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 498

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +P   TY  ++ G C +  + EA E++  ++  G +P ++ +T+++  +   GR+ EA 
Sbjct: 499 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 558

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++L E   RG  P+V+ + +L +     G   +   +   M ++ C PD ++Y T++   
Sbjct: 559 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 618

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +  A  I + M + G   D    NSL+ G     + + + ++ A+ V+++M    
Sbjct: 619 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG-----YVKLERVDQAFGVYDRMVASG 673

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT-ITFNNVIQALCGEGKIDKA 424
              +  T+ +++  L K  KTD A       +E   +P T +++  +I  L   G++ +A
Sbjct: 674 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEA 733

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                 M +   IP   +Y  LI  L +  +  +A  L    +K GV P
Sbjct: 734 FSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNP 782



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 171/342 (50%), Gaps = 19/342 (5%)

Query: 140 RKVIDC---MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            + +DC   M   G  P+V    I++N LCK+ ++ +A+E+  +M  +GC+P I +YN +
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           + GL  + +++EAY+   ++ ++G +PDV  +T ++ GFCK G+      LLN+A++R  
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-F 120

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            P+V  + ++ +GYCK G    G  +L+ M    C+PD  +Y  L++ L K G++  A  
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK-----VSVTDPG 371
           +F+ M + G   D     +L+  L          L++A +++ +M ++     + V D  
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEAL-----SNHGKLDEACELYREMIERGYEPYLEVQDS- 234

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
               +I  L K  K DEA       +        + +N+++   C  G++D  L LL  M
Sbjct: 235 ----LIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQM 290

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            E    P   +Y++L+    +  +  DA  L+      G  P
Sbjct: 291 VECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKP 332



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 173/387 (44%), Gaps = 11/387 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  ++F+ ++K G       F  L+ AL    + + A + + E    G  P   
Sbjct: 171 KLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLE 230

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
               +I   C      EA ++   +       +   +  L++  CK GR+ + L++L QM
Sbjct: 231 VQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQM 290

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P+IQTYN L+ G     R+++A E+   + + G KP+  TYT ++ G     R 
Sbjct: 291 VECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRM 350

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA    +EA+      +V+++ T+  G        +   L + +K   C P+ ++Y+ +
Sbjct: 351 EEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAV 404

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GLLK G+I   +  F++M              ++ GLC     +  +L DA +VFE+M
Sbjct: 405 IDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLC-----KAQMLPDACKVFEQM 459

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K  V D  TY  +I    K  K DEA   L   +  G  P  +T+ +++   C    I
Sbjct: 460 VQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMI 519

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLIT 448
           ++A  ++  M E    P    +  L++
Sbjct: 520 NEAKEVIAQMRERGCEPGLFIFTSLLS 546



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 6/292 (2%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           ++EAL+ L +M   G  P++   N +L GLC   ++++A E+ + + + G +P + +Y  
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           V+ G   + + +EA +  N  I+ G  P+V+ F TL +G+CK G P  G  LL    KR 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             PD   Y+++++G  K G +     I +EM+  G   D      L+  LC         
Sbjct: 121 -RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGR----- 174

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           +++AY++FE+M K   + D  T+  +I  L    K DEA       IE G+ P     ++
Sbjct: 175 VDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDS 234

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           +I ALC  GK+D+A  +   +       SR +Y+ L+    +L +  D   L
Sbjct: 235 LIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKL 286



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 1/275 (0%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           +E   +   +   G    V  +  L+  L        A   F      G AP++ T+  +
Sbjct: 555 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 614

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I+ +    +   A ++++ M  +G  P+   +  L++   K  R+ +A  V D+M   G 
Sbjct: 615 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 674

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           KPN  T+N L+ GL   G+ + A+ +    ++ D + P + +YT ++DG  K GR +EA 
Sbjct: 675 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAF 734

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
               E I+RG+ P   T+ +L     K G   +   L++ M K    PD  +YS L+ GL
Sbjct: 735 SQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 794

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           +    +  A  +F+EM++ G   +E     L RG 
Sbjct: 795 IDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 829



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 1/240 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FDS+ + G       +  ++     +   E A +     +  G+ P+ + ++ ++  Y 
Sbjct: 595 VFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYV 654

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNI 190
                 +A  V D M  +G  PN  TF +L++ L K G+   A  +  +M  +    P +
Sbjct: 655 KLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTL 714

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  L+ GL   GRV EA+     + + G+ P+ +TYT+++    K GR  EA +L+ +
Sbjct: 715 VSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVED 774

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            ++ GV P+V  ++ L  G            + + M KR C P++++Y  L  G    G+
Sbjct: 775 MVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 834



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 6/270 (2%)

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +EEA + L  +   GL PDV     V++G CK  + ++A+EL  E    G  P +V++NT
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + +G        +       M    C PD I+++TL++G  K G+ +    +  + ++  
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK-R 119

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
           F  D  +  S++ G C K+ +    L+  +++ E+M     + D   Y ++I  L K  +
Sbjct: 120 FRPDVFLYTSVIHGYC-KAGD----LDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGR 174

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            DEA        + G +   +TF  +I+AL   GK+D+A  L   M E    P     D 
Sbjct: 175 VDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDS 234

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQR 475
           LI  L +  K  +A  +Y   + + V   R
Sbjct: 235 LIFALCKAGKVDEANEIYQTVVAKKVATSR 264



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 1/205 (0%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I + + K G       +N L+   V L   + A   +    + G+ PN+ TF++++   
Sbjct: 629 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 688

Query: 131 CNKNDFFEARKVIDCMFD-NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
                   A  +   M + +   P + ++TIL++ L K+GR+ EA     +M   G  P 
Sbjct: 689 FKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPE 748

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TY  L+  L   GR+ EA +++ ++   G+ PDV  Y+A++ G       + A ++  
Sbjct: 749 CHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQ 808

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEG 274
           E ++RG  PN VT+  L  G+   G
Sbjct: 809 EMMKRGCAPNEVTYKVLRRGFRAAG 833



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 99/240 (41%), Gaps = 10/240 (4%)

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA++ L E    G+ P+VV  N + NG CK     K + L   M    C P  +SY+T+
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD--LLEDAYQVFE 359
           ++GL    K+  A   F  M+  G E D     +L+ G C     +    LL  A + F 
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR 121

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
                    D   Y  VI    K    D     L   +  G IP    +  +I  LC  G
Sbjct: 122 P--------DVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLG 173

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           ++D+A  L   M +   +    ++  LI  L    K  +AC LY   +++G  P  + QD
Sbjct: 174 RVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQD 233



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 6/195 (3%)

Query: 68  ERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNSWT 122
           ER+D    ++D +   G   +   FN L+  L    + + A   F E      + P   +
Sbjct: 657 ERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVS 716

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I          EA      M D G  P   T+T L+ SL K+GR+ EA ++++ M 
Sbjct: 717 YTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV 776

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           ++G  P++Q Y+ L+ GL     V+ A+++   +   G  P+  TY  +  GF   GR+ 
Sbjct: 777 KLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRAL 836

Query: 243 EAMELLNEAIERGVT 257
           + +E + +   +GV 
Sbjct: 837 D-LEAVKQHFSQGVA 850


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 191/389 (49%), Gaps = 5/389 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE  D+FD++   G N  V  +  +L               F      G+AP   
Sbjct: 338 KYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVIC 397

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+++I+ Y N     +A  + + M D+G  P+V T+  ++ +LC+ G++ +A+E  +QM
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+   Y+CL++G C  G + +A E++  + N+G++ D+  + ++++  CK+GR 
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  + +  +  G+ P+ V +N L +GYC  G   K + +   M      P+ + Y TL
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG  K G+I   +S+F+EM++ G +    + N ++ GL      E      A   F +M
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF-----EAGRTVPAKVKFHEM 632

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           T+     +  TY IV+R L K +  DEA+        M      IT N +I  +    ++
Sbjct: 633 TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 692

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++A  L   +     +P   +Y ++IT L
Sbjct: 693 EEAKDLFASISRSGLVPCAVTYSIMITNL 721



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 209/437 (47%), Gaps = 30/437 (6%)

Query: 60  RIKASPLK--ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET-------AVKFFSE 110
           R++   L+  E  D+ D +++ GT     D N  L AL               AV  F+ 
Sbjct: 39  RVREGTLRPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNR 98

Query: 111 ASSYG-----LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           A+S       L+P S+T++I++ C    +    A      +   G   +    + L+   
Sbjct: 99  AASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGF 158

Query: 166 CKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LK 222
           C++ R  EAL++L  +   +GC P++ +YN LLK LC  G+  +A ++L  +   G    
Sbjct: 159 CEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCS 218

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           PDV  Y  V+DGF K G  N+A +L  E ++RG+ P++VT++++ +  CK     K    
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L+ M  +  LPD  +Y+ L+ G    G+ + AV +FKEM R     D   +N+L+  LC 
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLC- 337

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM--- 399
               +   +++A  VF+ M  K    D  +Y I++     G  T   L+ +    ++   
Sbjct: 338 ----KYGKIKEARDVFDTMAMKGQNPDVFSYTIML----NGYATKGCLVDMTDLFDLMLG 389

Query: 400 -GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G  P   TFN +I+A    G +DKA+++   M +H   P   +Y  +I  L ++ K  D
Sbjct: 390 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449

Query: 459 ACALYGAALKQGVIPQR 475
           A   +   + QGV+P +
Sbjct: 450 AMEKFNQMIDQGVVPDK 466



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 175/369 (47%), Gaps = 8/369 (2%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           NW+   +N+L+       + + AV+ F E     + P+    + ++   C      EAR 
Sbjct: 291 NWT---YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V D M   G +P+V ++TI++N     G L +  ++ D M   G  P I T+N L+K   
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYA 407

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G +++A  +   +++ G+KP V TY  V+   C++G+ ++AME  N+ I++GV P+  
Sbjct: 408 NCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKY 467

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            ++ L  G+C  G+ +K   L+  +       D + + +++N L K G++  A +IF   
Sbjct: 468 AYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLT 527

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           V  G   D  + N L+ G C+    EK     A +VF+ M       +   YG ++    
Sbjct: 528 VNVGLHPDAVVYNMLMDGYCLVGKMEK-----ALRVFDAMVSAGIEPNVVGYGTLVNGYC 582

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K  + DE L      ++ G  P TI +N +I  L   G+   A +    M E     ++ 
Sbjct: 583 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 642

Query: 442 SYDMLITKL 450
           +Y +++  L
Sbjct: 643 TYSIVLRGL 651



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 184/359 (51%), Gaps = 5/359 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + + IF+ ++  G    V  +  ++ AL  + + + A++ F++    G+ P+ + +  
Sbjct: 412 LDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+ +C      +A+++I  + +NG   ++  F  ++N+LCK GR+ +A  + D    +G
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+   YN L+ G C VG++E+A  +   + + G++P+V  Y  +++G+CK+GR +E +
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 591

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  E +++G+ P+ + +N + +G  + G  +        M +     +K +YS +L GL
Sbjct: 592 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 651

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K      A+ +FKE+     ++D   +N+++ G+      +   +E+A  +F  +++  
Sbjct: 652 FKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF-----QTRRVEEAKDLFASISRSG 706

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            V    TY I+I  L K    +EA          G  P +   N+V++ L  + +I +A
Sbjct: 707 LVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/406 (23%), Positives = 182/406 (44%), Gaps = 7/406 (1%)

Query: 71  DIFDSIKKDGTNWS--VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
           D+   + + GT  S  V  +N ++       +   A   F E    G+ P+  T+S ++ 
Sbjct: 205 DLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVH 264

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
             C      +A   +  M + G  P+  T+  L+     +G+ KEA+ V  +M R    P
Sbjct: 265 ALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP 324

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           ++   N L+  LC  G+++EA ++   +   G  PDV++YT +++G+   G   +  +L 
Sbjct: 325 DVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLF 384

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +  +  G+ P + TFN L   Y   G   K + +   M+     P  ++Y T++  L + 
Sbjct: 385 DLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRI 444

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           GK+  A+  F +M+  G   D+   + L++G C        LL+    + E M   + + 
Sbjct: 445 GKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG----SLLKAKELISEIMNNGMRL- 499

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D   +G +I  L K  +  +A       + +G  P  + +N ++   C  GK++KAL + 
Sbjct: 500 DIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 559

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             M      P+   Y  L+    ++ +  +  +L+   L++G+ P 
Sbjct: 560 DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 605



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/265 (20%), Positives = 114/265 (43%), Gaps = 12/265 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ + +FD++   G   +V  +  L+     +   +  +  F E    G+ P++  ++I
Sbjct: 552 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 611

Query: 126 MIRCYCNKNDFFEARKVIDC------MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           +I      +  FEA + +        M ++G   N  T++I++  L K+    EA+ +  
Sbjct: 612 II------DGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFK 665

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           ++  +  K +I T N ++ G+    RVEEA ++  ++   GL P   TY+ ++    K G
Sbjct: 666 ELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEG 725

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
              EA ++ +     G  P+    N +     K+   ++    L  + +RN   + ++  
Sbjct: 726 LVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAM 785

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRF 324
            L++     G  R  +        F
Sbjct: 786 LLVDLFSSKGTCREQIRFLPAKYHF 810



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 93/214 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F  + + G   S   +N ++  L        A   F E +  G+A N  
Sbjct: 583 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 642

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI++R       F EA  +   +       ++ T   ++  + ++ R++EA ++   +
Sbjct: 643 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 702

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  P   TY+ ++  L   G VEEA +M  +++N G +PD      V+    K    
Sbjct: 703 SRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 762

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
             A   L++  ER  +   +T   L + +  +GT
Sbjct: 763 VRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGT 796


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 191/386 (49%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+     +N  + A +      S   +P++ T++IMI   C++     A KV++ + 
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +   P V T+TIL+ +    G + EAL+++D+M   G KP++ TYN +++G+C  G V+
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A+EM+ N++  G +PDV +Y  ++      G+  E  +L+ +       PNVVT++ L 
Sbjct: 281 RAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              C++G   + + LLKLMK++   PD  SY  L+    + G++  A+   + M+  G  
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    N++L  LC     ++     A ++F K+ +     +  +Y  +   L       
Sbjct: 401 PDIVNYNTVLATLCKNGKADQ-----ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            AL  +   +  G  P  IT+N++I  LC EG +D+A  LL  M      PS  +Y++++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +  +  DA  +  + +  G  P
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRP 541



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 175/382 (45%), Gaps = 38/382 (9%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + + +  D    +V  +  L+ A ++    + A+K   E  S GL P+ +T++ +IR 
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C +     A +++  +   G  P+V ++ IL+ +L   G+ +E  +++ +M    C PN
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY+ L+  LC  G++EEA  +L  +K  GL PD Y+Y  ++  FC+ GR + A+E L 
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             I  G  P++V +NT+    CK G   + + +   + +  C P+  SY+T+ + L   G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------------MKSWE--------- 346
               A+ +  EM+  G + DE   NS++  LC              M+S E         
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512

Query: 347 -------EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
                  +   +EDA  V E M       +  TY ++I  +G      EA+   +  + +
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572

Query: 400 GHIP--------RTITFNNVIQ 413
             I         RT    NV+Q
Sbjct: 573 DAISEYSFKRLHRTFPLLNVLQ 594



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 169/347 (48%), Gaps = 14/347 (4%)

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   ++ E+  +++ M   GY+P+V   T L+        + +A+ V++ + + G +P++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             YN L+ G C + R+++A  +L  +++    PD  TY  ++   C  G+ + A+++LN+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +     P V+T+  L      EG   + + L+  M  R   PD  +Y+T++ G+ K G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSV-T 368
           +  A  + + +   G E D    N LLR L  +  WEE + L         MTK  S   
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKL---------MTKMFSEKC 329

Query: 369 DPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           DP   TY I+I TL +  K +EA+  L    E G  P   +++ +I A C EG++D A+ 
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L  M     +P   +Y+ ++  L +  K+  A  ++G   + G  P
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 41/314 (13%)

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           C+SG   E+L +L+ M R G  P++     L+KG   +  + +A  ++  ++  G +PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           + Y A+++GFCK+ R ++A  +L+    +  +P+ VT+N +    C  G     + +L  
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           +   NC P  I+Y+ L+   +  G +  A+ +  EM+  G + D                
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD---------------- 262

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                      +F             TY  +IR + K    D A   + +    G  P  
Sbjct: 263 -----------MF-------------TYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDV 298

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           I++N +++AL  +GK ++   L+  M+     P+  +Y +LIT L +  K  +A  L   
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358

Query: 466 ALKQGVIPQRKPQD 479
             ++G+ P     D
Sbjct: 359 MKEKGLTPDAYSYD 372



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 6/182 (3%)

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +F+  C+ G  ++ + LL+ M ++   PD I  + L+ G      I  AV + + + +FG
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            + D    N+L+ G C     + + ++DA +V ++M  K    D  TY I+I +L    K
Sbjct: 155 -QPDVFAYNALINGFC-----KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D AL  L+  +     P  IT+  +I+A   EG +D+AL L+  M      P   +Y+ 
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268

Query: 446 LI 447
           +I
Sbjct: 269 II 270


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 183/405 (45%), Gaps = 30/405 (7%)

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
           N+   A   F++A S+  +P    F+ +I    N  +F  A  V   +   G   +   +
Sbjct: 44  NKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAY 103

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
            +L+    +SG+L  A+E+  +M   G +P+  TY  L+  L   GRV+EA      +  
Sbjct: 104 NVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLE 163

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            GL P++ TY  +MD F KVG+ + A+ L  E   RG  P+VVT+N L +  C  G    
Sbjct: 164 RGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGA 223

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              L   M    C PD  +YSTL+NGL K G++  A  +F+EMV  G  VD    NSLL 
Sbjct: 224 ARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLA 283

Query: 339 GLC-----------MKSWEEKDLLEDAY-------------------QVFEKMTKKVSVT 368
            L            MK    K    DA+                   +VF +M +     
Sbjct: 284 TLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKP 343

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  +Y I+I +  +     +A   L   +E G IP T T+N++I  L  +G++D+A  +L
Sbjct: 344 DLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVL 403

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M      P   +Y+ L+  L +  ++  A  L+     +GV P
Sbjct: 404 EEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEP 448



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 184/388 (47%), Gaps = 8/388 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  + + G       +N L+       + ++A++ F E    G  P+ +T+  ++    
Sbjct: 87  VYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALG 146

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EAR   D M + G  PN+ T+ +L+++  K G+L  AL +  +M R G +P++ 
Sbjct: 147 KAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVV 206

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN LL  LC  GRV  A ++   +  DG  PD YTY+ +++G  K GR  EA ++  E 
Sbjct: 207 TYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREM 266

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           ++RGV  ++V +N+L     K G   +   L+K M ++   PD  S++T+++ L K  K 
Sbjct: 267 VDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKP 326

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +F  MV  G + D    N L+      S+        A Q+ E+M +   + +  
Sbjct: 327 DAAREVFARMVESGCKPDLISYNILI-----DSYARFGDAAQARQMLEEMVEAGFIPETK 381

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L    + DEA   L      G  P  +T+N ++  L   G+  +A  L   M
Sbjct: 382 TYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQM 441

Query: 432 YEHAKIPSRTSYDMLITKL---DQLEKS 456
            +    P   SY + I  L   D+L+++
Sbjct: 442 KDKGVEPDTLSYAVRIDGLAFDDRLDEA 469



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 165/361 (45%), Gaps = 7/361 (1%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           L PN  T   +I  Y   N   +A  + +        P V  FT L++ L  SG  + A 
Sbjct: 28  LRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAE 85

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            V  ++ + GC+ +   YN L++     G+++ A EM   +K  G +PD YTY  +++  
Sbjct: 86  LVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNAL 145

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
            K GR  EA    +  +ERG+TPN+ T+N L + + K G     +GL   MK+R   P  
Sbjct: 146 GKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSV 205

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           ++Y+ LL+ L   G++  A  +F +M   G   D    ++L+ GL      +   +E+A+
Sbjct: 206 VTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLG-----KSGRVEEAH 260

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           +VF +M  +    D   Y  ++ TL K    D     +      G  P   +FN ++ AL
Sbjct: 261 KVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDAL 320

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
               K D A  +   M E    P   SY++LI    +   +  A  +    ++ G IP+ 
Sbjct: 321 GKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPET 380

Query: 476 K 476
           K
Sbjct: 381 K 381



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 138/313 (44%), Gaps = 35/313 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   + +F  +K+ G   SV  +N LL AL        A K F + +  G +P+S+
Sbjct: 182 KVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSY 241

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNG------------------------------- 150
           T+S ++          EA KV   M D G                               
Sbjct: 242 TYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM 301

Query: 151 ----YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
               +HP+  +F  ++++L K+ +   A EV  +M   GCKP++ +YN L+      G  
Sbjct: 302 SRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDA 361

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            +A +ML  +   G  P+  TY +++      G+ +EA  +L E    G  P+VVT+N L
Sbjct: 362 AQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRL 421

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +   K G   +   L + MK +   PD +SY+  ++GL    ++  A+ +FK+M   G 
Sbjct: 422 MDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGC 481

Query: 327 EVDERMMNSLLRG 339
            VD+ M   L+R 
Sbjct: 482 PVDKAMYRILIRA 494



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 121/248 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  ++E   +F  +   G    + ++N LL  L      +   K   E S  G  P+++
Sbjct: 252 KSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAF 311

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F+ ++      N    AR+V   M ++G  P++ ++ IL++S  + G   +A ++L++M
Sbjct: 312 SFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEM 371

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P  +TYN L+  L   G+V+EA+ +L  ++  G +PDV TY  +MD   K G +
Sbjct: 372 VEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGEN 431

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A  L  +  ++GV P+ +++    +G   +    + + L K MK   C  DK  Y  L
Sbjct: 432 QRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRIL 491

Query: 302 LNGLLKWG 309
           +    + G
Sbjct: 492 IRAAHRAG 499



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 51/120 (42%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L    + + A     E  + G  P+  T++ ++     + +   A ++   M 
Sbjct: 383 YNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMK 442

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  P+  ++ + ++ L    RL EAL +   M  +GC  +   Y  L++     G  E
Sbjct: 443 DKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 197/404 (48%), Gaps = 7/404 (1%)

Query: 72  IFDS-IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +FD  + + G       F  L++        E      +     G   ++ T ++++R +
Sbjct: 171 VFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVF 230

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C K  F +  ++   M + G  PNV  +T  ++ LCK   +K+A  VL++M   G KPN+
Sbjct: 231 CQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNV 290

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
            T+  L+ GLC +G  E A+ + +  +K+   KP+V+TYT ++ G+CK G+   A  LL 
Sbjct: 291 YTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLG 350

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             +E+G+ PN  T+ TL +G+CKEG+      L+  M++    P+  +Y+ L++GL K G
Sbjct: 351 RMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKG 410

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           KI+ A  + +     G ++D+     ++   C     ++  +  A  +F +M +     D
Sbjct: 411 KIQEAYKVLRMANNQGLQLDKVTYTVMITEHC-----KQGHITYALDLFNRMAENGCHPD 465

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  +I    + ++ +E+       + +  +P   T+ ++I   C  GK   AL +  
Sbjct: 466 IHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFE 525

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M ++       +Y  LI+ L +  +  +A ALY   L + ++P
Sbjct: 526 RMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVP 569



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 166/326 (50%), Gaps = 11/326 (3%)

Query: 43  LDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
           L++   P  +    ++D + K + +K+   + + +   G   +V     L+  L  +   
Sbjct: 247 LEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWT 306

Query: 102 ETAVKFF---SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
           E A + F    ++SSY   PN  T+++MI  YC +     A  ++  M + G  PN  T+
Sbjct: 307 ERAFRLFLKLIKSSSY--KPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTY 364

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
           T L++  CK G    A E++++M R G +PNI TYN L+ GLC  G+++EAY++L    N
Sbjct: 365 TTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANN 424

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            GL+ D  TYT ++   CK G    A++L N   E G  P++ T+ TL   YC++    +
Sbjct: 425 QGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEE 484

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              L         +P K +Y++++ G  K GK   A+ +F+ MV+ G + D     +L+ 
Sbjct: 485 SQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALIS 544

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKK 364
           GLC +S      LE+A  ++E M  K
Sbjct: 545 GLCKESR-----LEEARALYEGMLDK 565



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 206/454 (45%), Gaps = 10/454 (2%)

Query: 19  NHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKK 78
           +   +    +L V AA +     SL +           F +   A  L E  D+   ++ 
Sbjct: 86  SRQDVRHLMRLYVTAATTFVDRGSLPMAHEAMRRMVAAFAE---AGRLPEAADMVFEMRS 142

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFF 137
            G  + V   N +L A +       A K F    +  GL P++ +F  +I   C      
Sbjct: 143 HGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRME 202

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           E   ++  M   G+  +  T T++V   C+ GR ++  E+  +M  +G  PN+  Y   +
Sbjct: 203 EVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWI 262

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE-RGV 256
            GLC    V++A+ +L  +   GLKP+VYT+T++++G CK+G +  A  L  + I+    
Sbjct: 263 DGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSY 322

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            PNV T+  +  GYCKEG   +   LL  M ++   P+  +Y+TL++G  K G    A  
Sbjct: 323 KPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFE 382

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           +  +M R GF+ +    N+L+ GLC     +K  +++AY+V      +    D  TY ++
Sbjct: 383 LMNKMRREGFQPNIYTYNALIDGLC-----KKGKIQEAYKVLRMANNQGLQLDKVTYTVM 437

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I    K      AL   +   E G  P   T+  +I   C + +++++  L         
Sbjct: 438 ITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIEL 497

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +P++ +Y  +I    ++ KS  A  ++   ++ G
Sbjct: 498 VPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNG 531



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 190/445 (42%), Gaps = 13/445 (2%)

Query: 34  AASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLM 93
           A S  +A +L+L     S Q  R + R+  +     +D      +     +      ++ 
Sbjct: 69  ADSAGSAAALELFRRLASRQDVRHLMRLYVTAATTFVD------RGSLPMAHEAMRRMVA 122

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD-NGYH 152
           A         A     E  S+GL     T + ++R   +   F  ARKV D M    G  
Sbjct: 123 AFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLL 182

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P+  +F  L+   C+ GR++E   +L  M   G   +  T   +++  C  GR  +  E+
Sbjct: 183 PDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSEL 242

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G  P+V  YTA +DG CK     +A  +L E + +G+ PNV T  +L NG CK
Sbjct: 243 FRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCK 302

Query: 273 EGTPMKGVGL-LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
            G   +   L LKL+K  +  P+  +Y+ ++ G  K GK+  A  +   MV  G   +  
Sbjct: 303 IGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 362

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
              +L+ G C     ++     A+++  KM ++    +  TY  +I  L K  K  EA  
Sbjct: 363 TYTTLISGHC-----KEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYK 417

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            L  A   G     +T+  +I   C +G I  AL L   M E+   P   +Y  LI +  
Sbjct: 418 VLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYC 477

Query: 452 QLEKSYDACALYGAALKQGVIPQRK 476
           Q  +  ++  L+   L   ++P ++
Sbjct: 478 QQRQMEESQKLFDKCLAIELVPTKQ 502



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 104/207 (50%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN +T++ +I   C K    EA KV+    + G   +  T+T+++   CK G +  A
Sbjct: 391 GFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYA 450

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L++ ++M   GC P+I TY  L+   C   ++EE+ ++        L P   TYT+++ G
Sbjct: 451 LDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAG 510

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           +CKVG+S  A+ +    ++ G   + +T+  L +G CKE    +   L + M  +  +P 
Sbjct: 511 YCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPC 570

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEM 321
           +++  TL     +  K   AVSI   +
Sbjct: 571 EVTPVTLAFEYCRREKAVVAVSILDRL 597



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 126/267 (47%), Gaps = 3/267 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++ + ++++G   ++  +N L+  L    + + A K    A++ GL  +  T+++MI  +
Sbjct: 382 ELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEH 441

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +     A  + + M +NG HP++ T+T L+   C+  +++E+ ++ D+   I   P  
Sbjct: 442 CKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTK 501

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           QTY  ++ G C VG+   A  +   +  +G + D  TY A++ G CK  R  EA  L   
Sbjct: 502 QTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEG 561

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +++ + P  VT  TL   YC+    +  V +L  + KR       + + L+  L   G 
Sbjct: 562 MLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRR---KNHTVNVLVRKLSAIGH 618

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +  A    K+ +     VD     S +
Sbjct: 619 VEDASLFLKKALDVDLAVDRLAYTSFI 645



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 78/196 (39%), Gaps = 32/196 (16%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D+F+ + ++G +  +  +  L+       + E + K F +  +  L P   T++ MI  
Sbjct: 451 LDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAG 510

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-------- 181
           YC       A +V + M  NG   +  T+  L++ LCK  RL+EA  + + M        
Sbjct: 511 YCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPC 570

Query: 182 ------------------------GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
                                    R+  +    T N L++ L  +G VE+A   L    
Sbjct: 571 EVTPVTLAFEYCRREKAVVAVSILDRLDKRRKNHTVNVLVRKLSAIGHVEDASLFLKKAL 630

Query: 218 NDGLKPDVYTYTAVMD 233
           +  L  D   YT+ ++
Sbjct: 631 DVDLAVDRLAYTSFIN 646


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 195/407 (47%), Gaps = 16/407 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + +  T  S+ D N  L A V       A+  F+      L     T+SI+I C  
Sbjct: 54  LFDELLRRDTT-SIFDLNSALSA-VARESPAVALSLFNRMPRADLC----TYSIVIGCCS 107

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV-LDQMGRIGCKPNI 190
                  A   +  +   G+     TF+ L+  LC   R  +A+++ L +M  +GC PN 
Sbjct: 108 RAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNA 167

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKND----GLKPDVYTYTAVMDGFCKVGRSNEAME 246
            +YN LLKGLC   R ++A  +L  +  D    G  PDV +YT V++G  + G+ ++A  
Sbjct: 168 FSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYC 227

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L +E +++G++PN +T+N L +GYC  G P + +G+ + M +    PD ++Y+TL+  L 
Sbjct: 228 LFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLC 287

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G+   A  +F  MV+ G + D  +  +LL G   + +     L   +Q+ + M +  +
Sbjct: 288 KNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGY-----LVQMHQLLDVMVRNGT 342

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D   + I+I    K    DEA++      + G  P  +T+  V+ ALC  GK+D A+ 
Sbjct: 343 QPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMS 402

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               +      P+   +  LI  L   +K   A  L    + +G+ P
Sbjct: 403 QFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICP 449



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 198/410 (48%), Gaps = 11/410 (2%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I IF  + +DG    V  +N L++ L        A K F      G  P+S  +  +
Sbjct: 258 KEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTL 317

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  Y  +    +  +++D M  NG  P+   F IL+ +  K G + EA+    +M + G 
Sbjct: 318 LHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGL 377

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PNI TY  ++  LC VG+V++A      + ++GL P+   +  ++ G C   + ++A E
Sbjct: 378 HPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEE 437

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L  E I RG+ PN + FNTL N  CKEG   +   +  LM + +   D I+Y+TL++G  
Sbjct: 438 LAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYC 497

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A  + + MV  G + +E   N+++ G C     +   +EDA  +F +M  K  
Sbjct: 498 LDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYC-----KNGRIEDACSLFRQMASK-- 550

Query: 367 VTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             +PG   Y  ++  L + ++   A       I+ G      T+N ++Q LC     D A
Sbjct: 551 GVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDA 610

Query: 425 LLLLF-LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L +   L      + +RT ++++I  L +  +  +A  L+ + L +G++P
Sbjct: 611 LRMFHNLCLIDFHLQNRT-FNIMIDALLKGGRHDEAKDLFASLLARGLVP 659



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 167/348 (47%), Gaps = 5/348 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D + ++GT      FN L+ A       + A+  FS+    GL PN  T+  ++   C
Sbjct: 333 LLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALC 392

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A    D +   G  PN   F  L++ LC   +  +A E+  +M   G  PN  
Sbjct: 393 RVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTI 452

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            +N LL  LC  G V  A  +   +    ++ DV TYT ++DG+C  G+ +EA +LL   
Sbjct: 453 FFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGM 512

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  GV PN VT+NT+ NGYCK G       L + M  +   P  + YST+L+GL +  +I
Sbjct: 513 VLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRI 572

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  ++  M++ G ++     N +L+GLC     + +  +DA ++F  +          
Sbjct: 573 AAAKELYLWMIKCGIKLPIGTYNIILQGLC-----QNNCTDDALRMFHNLCLIDFHLQNR 627

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           T+ I+I  L KG + DEA       +  G +P  +T+  ++++L  +G
Sbjct: 628 TFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 675



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 179/394 (45%), Gaps = 5/394 (1%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           + G    V  +  ++  L+   + + A   F E    G++PN  T++ ++  YC+     
Sbjct: 199 RGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPK 258

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA  +   M  +G  P+V T+  L+  LCK+GR  EA +V D M + G KP+   Y  LL
Sbjct: 259 EAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLL 318

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G    G + + +++L  +  +G +PD Y +  ++  + K G  +EAM   ++  ++G+ 
Sbjct: 319 HGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLH 378

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PN+VT+ T+ +  C+ G     +     +      P+ + + TL++GL    K   A  +
Sbjct: 379 PNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEEL 438

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             EM+  G   +    N+LL  LC     ++ ++  A  +F+ M +     D  TY  +I
Sbjct: 439 AVEMIGRGICPNTIFFNTLLNHLC-----KEGMVTRAKNIFDLMVRVDVQCDVITYTTLI 493

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
                  K DEA   L   +  G  P  +T+N +I   C  G+I+ A  L   M      
Sbjct: 494 DGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVN 553

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           P    Y  ++  L Q  +   A  LY   +K G+
Sbjct: 554 PGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGI 587



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 143/317 (45%), Gaps = 30/317 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +  F  +++ G + ++  +  ++ AL  + + + A+  F    S GL PN  
Sbjct: 358 KHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGV 417

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F  +I   C  + + +A ++   M   G  PN   F  L+N LCK G +  A  + D M
Sbjct: 418 VFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLM 477

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R+  + ++ TY  L+ G C  G+V+EA ++L  +  DG+KP+  TY  +++G+CK GR 
Sbjct: 478 VRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRI 537

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  L  +   +GV P +V ++T+ +G  +         L   M K        +Y+ +
Sbjct: 538 EDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNII 597

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDER----MMNSLLRG------------------ 339
           L GL +      A+ +F  +    F +  R    M+++LL+G                  
Sbjct: 598 LQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGL 657

Query: 340 --------LCMKSWEEK 348
                   L MKS  E+
Sbjct: 658 VPNVVTYWLMMKSLIEQ 674



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 136/334 (40%), Gaps = 43/334 (12%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN LL  L        A   F       +  +  T++ +I  YC      EA K+++ M 
Sbjct: 454 FNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMV 513

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G  PN  T+  ++N  CK+GR+++A  +  QM   G  P I  Y+ +L GL    R+ 
Sbjct: 514 LDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIA 573

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFC------------------------------- 236
            A E+ + +   G+K  + TY  ++ G C                               
Sbjct: 574 AAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMI 633

Query: 237 ----KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
               K GR +EA +L    + RG+ PNVVT+  +     ++G   +   L   ++K  C 
Sbjct: 634 DALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCT 693

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK-DLL 351
            D    + L+  L + G++R A     ++    F ++     SL+  +    +++  + +
Sbjct: 694 ADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLVFLVSSGKYDQHINSI 753

Query: 352 EDAYQ-------VFEKMTKKVSVTDPGTYGIVIR 378
            + Y+       VF +          G+YG+V R
Sbjct: 754 PEKYRPTAKSRAVFSQKKNPGLFDAAGSYGVVTR 787



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 1/221 (0%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   + + +  DG   +   +N ++         E A   F + +S G+ P    +S 
Sbjct: 502 VDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYST 561

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++           A+++   M   G    + T+ I++  LC++    +AL +   +  I 
Sbjct: 562 ILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLID 621

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
                +T+N ++  L   GR +EA ++  ++   GL P+V TY  +M    + G   E  
Sbjct: 622 FHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELD 681

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK-GVGLLKL 285
           +L     + G T +    N L     ++G   K GV L K+
Sbjct: 682 DLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKI 722



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 4/207 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++   +F  +   G N  +  ++ +L  L        A + +      G+     
Sbjct: 533 KNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIG 592

Query: 122 TFSIMIRCYCNKNDFFEARKVID--CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           T++I+++  C  N   +A ++    C+ D  +H    TF I++++L K GR  EA ++  
Sbjct: 593 TYNIILQGLCQNNCTDDALRMFHNLCLID--FHLQNRTFNIMIDALLKGGRHDEAKDLFA 650

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            +   G  PN+ TY  ++K L   G +EE  ++ ++++ +G   D     A++    + G
Sbjct: 651 SLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKG 710

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTL 266
              +A   L++  E   +    T  +L
Sbjct: 711 EVRKAGVYLSKIDENNFSLEASTAESL 737


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 220/452 (48%), Gaps = 43/452 (9%)

Query: 62  KASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K S   + +D+F  +++  G   ++  +N LL A V   +       F+   + G+APN 
Sbjct: 90  KNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNL 149

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++++I+  C K +F +AR  +D M+  G+ P+V +++ ++N L K+G+L +ALE+ D+
Sbjct: 150 QTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDE 209

Query: 181 MGRIGCK------------------------------------PNIQTYNCLLKGLCYVG 204
           M   G                                      PN++T+N ++ GL   G
Sbjct: 210 MSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG 269

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           RV++  ++   +K +  + D+YTY++++ G C  G  ++A  + NE  ER  + +VVT+N
Sbjct: 270 RVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYN 329

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           T+  G+C+ G   + + L ++M+ +N + + +SY+ L+ GLL+ GKI  A  I++ M   
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAK 388

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G+  D+      + GLC+  +  K     A  V +++       D   Y  +I  L K K
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNK-----ALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + +EA   +    + G    +   N +I  L  + ++ +A   L  M ++   P+  SY+
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN 503

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           +LI  L +  K  +A A     L+ G  P  K
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 125/239 (52%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+    E  S G   + + ++ +I C C K    EA  ++  M  +G   N      L+ 
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            L +  RL EA   L +MG+ GC+P + +YN L+ GLC  G+  EA   +  +  +G KP
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D+ TY+ ++ G C+  + + A+EL ++ ++ G+  +V+  N L +G C  G     + ++
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
             M+ RNC  + ++Y+TL+ G  K G    A  I+  M + G + D    N++++GLCM
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCM 651



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/467 (22%), Positives = 203/467 (43%), Gaps = 67/467 (14%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
            D + K+G    V  ++ ++  L    + + A++ F E S  G+AP+   ++I+I  +  
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231

Query: 133 KNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           + D   A ++ D +  D+  +PNV T  I+++ L K GR+ + L++ ++M +   + ++ 
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY+ L+ GLC  G V++A  +   +       DV TY  ++ GFC+ G+  E++EL    
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RI 350

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +E   + N+V++N L  G  + G   +   + +LM  +    DK +Y   ++GL   G +
Sbjct: 351 MEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410

Query: 312 RPAVSIF-----------------------------------KEMVRFGFEVDERMMNSL 336
             A+ +                                    KEM + G E++  + N+L
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470

Query: 337 LRGL--------------------CMKSWEEKDLL----------EDAYQVFEKMTKKVS 366
           + GL                    C  +    ++L           +A    ++M +   
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY I++  L + +K D AL   H  ++ G     +  N +I  LC  GK+D A+ 
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++  M       +  +Y+ L+    ++  S  A  ++G   K G+ P
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP 637



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 185/412 (44%), Gaps = 6/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + I++ +K++     +  ++ L+  L      + A   F+E      + +  
Sbjct: 267 KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 326

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ M+  +C      E+ ++   M ++    N+ ++ IL+  L ++G++ EA  +   M
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLM 385

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +  TY   + GLC  G V +A  ++  V++ G   DVY Y +++D  CK  R 
Sbjct: 386 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL 445

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L+ E  + GV  N    N L  G  ++    +    L+ M K  C P  +SY+ L
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL K GK   A +  KEM+  G++ D +  + LL GLC     + DL   A +++ + 
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD--RKIDL---ALELWHQF 560

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +    TD   + I+I  L    K D+A+  + +          +T+N +++     G  
Sbjct: 561 LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDS 620

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++A ++   MY+    P   SY+ ++  L        A   +  A   G+ P
Sbjct: 621 NRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 153/326 (46%), Gaps = 5/326 (1%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I+I+         EA  +   M   GY  + TT+ I ++ LC +G + +AL V+ ++
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   ++  Y  ++  LC   R+EEA  ++  +   G++ + +   A++ G  +  R 
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA   L E  + G  P VV++N L  G CK G   +    +K M +    PD  +YS L
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L GL +  KI  A+ ++ + ++ G E D  M N L+ GLC         L+DA  V   M
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC-----SVGKLDDAMTVMANM 595

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +    +  TY  ++    K   ++ A +   +  +MG  P  I++N +++ LC    +
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV 655

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI 447
             A+        H   P+  ++++L+
Sbjct: 656 SYAMEFFDDARNHGIFPTVYTWNILV 681



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 127/271 (46%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +   ++  G +  V  +  ++  L      E A     E S +G+  NS   + +I  
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
               +   EA   +  M  NG  P V ++ IL+  LCK+G+  EA   + +M   G KP+
Sbjct: 474 LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           ++TY+ LL GLC   +++ A E+       GL+ DV  +  ++ G C VG+ ++AM ++ 
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMA 593

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
               R  T N+VT+NTL  G+ K G   +   +   M K    PD ISY+T++ GL    
Sbjct: 594 NMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCR 653

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +  A+  F +    G        N L+R +
Sbjct: 654 GVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+ S L E       + K+G   +V  +N L+  L    +   A  F  E    G  P+ 
Sbjct: 475 IRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+SI++   C       A ++      +G   +V    IL++ LC  G+L +A+ V+  
Sbjct: 535 KTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMAN 594

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M    C  N+ TYN L++G   VG    A  +   +   GL+PD+ +Y  +M G C    
Sbjct: 595 MEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG 654

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTL 266
            + AME  ++A   G+ P V T+N L
Sbjct: 655 VSYAMEFFDDARNHGIFPTVYTWNIL 680



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 8/168 (4%)

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR-FGFEVDERMMNSLLRGL 340
           +++L++ + C  D+    +++    K      A+ +FK M   FG E   R  N+LL   
Sbjct: 65  IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124

Query: 341 C-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
              K W +   +E  +  FE  T  V+  +  TY ++I+   K K+ ++A   L    + 
Sbjct: 125 VEAKQWVK---VESLFAYFE--TAGVA-PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKE 178

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           G  P   +++ VI  L   GK+D AL L   M E    P  T Y++LI
Sbjct: 179 GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILI 226


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 214/477 (44%), Gaps = 87/477 (18%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS--------- 112
           KA  +   +D+ + ++K+G    +  +N L+       E + A     E S         
Sbjct: 159 KAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSV 218

Query: 113 ------------SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
                       +  L  +  T++ +I  YC ++   EAR + + M  NG+ P+V T++ 
Sbjct: 219 FFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSS 278

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY---------- 210
           +VN LCK GRL EA E+L +M ++G  PN   Y  L+  L   G   EA+          
Sbjct: 279 IVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRG 338

Query: 211 -------------------------EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
                                    +M   +    L P+  TYTA++DG+CKVG      
Sbjct: 339 MTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVE 398

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL E  E+ + PNV+T++++ NGY K+G   + + ++K M  +N +P+   Y+ L++G 
Sbjct: 399 SLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGY 458

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVD----ERMMNSLLRGLCMKSWEE-------KDLLED- 353
            K GK   A  ++ EM   G +V+    + ++N+L RG  M   EE       + LL D 
Sbjct: 459 CKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDH 518

Query: 354 ------------------AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
                             A  + E+MT+K    D  TY ++I  L +  K +   ++   
Sbjct: 519 VNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVY-SG 577

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            IEMG  P   T+N +I+A C +G++D AL L   M  H  +PS  + + L+  L +
Sbjct: 578 MIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSE 634



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 201/482 (41%), Gaps = 74/482 (15%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+S  KE  D+F ++ K     +   +  L+     + + E       E     + PN  
Sbjct: 355 KSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVI 414

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  Y  K    EA  V+  M D    PN   + IL++  CK+G+ + A ++ ++M
Sbjct: 415 TYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEM 474

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G K N   ++ L+  L    R++EA E+L +V + GL  D   YT++MDGF K G+ 
Sbjct: 475 KLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKE 534

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNG-------------------------------- 269
           + A+ ++ E  E+ +  +VVT+N L NG                                
Sbjct: 535 SAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMI 594

Query: 270 --YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM------ 321
             YCK+G     + L   MK    +P  I+ +TL+ GL + G+I  A+++  EM      
Sbjct: 595 KAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIH 654

Query: 322 -----------------------------VRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
                                        V  G ++++   N+L+   C     +K    
Sbjct: 655 PNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKK---- 710

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A  V + M +   V D  TY  +IR   +     +AL      +  G  P  +T+N ++
Sbjct: 711 -ATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLL 769

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             L G G + +   L   M E+   P  ++YD LI+   ++    ++  LY   + QG +
Sbjct: 770 GGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFV 829

Query: 473 PQ 474
           P+
Sbjct: 830 PK 831



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 183/396 (46%), Gaps = 12/396 (3%)

Query: 68  ERIDIFDSIKKDGTNWSV----SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           +R+D  + + KD T+  +     ++  L+       ++  A+    E +   +  +  T+
Sbjct: 497 KRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTY 556

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           +++I        + EA+ V   M + G  PN  T+ I++ + CK G L  ALE+ ++M  
Sbjct: 557 NVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKS 615

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P+  T N L+ GL   G +E+A  +L  +   G+ P++  +  +++   K G++N 
Sbjct: 616 HKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANA 675

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
            +++  + ++ G+  N   +N L   +C+     K   +LK M +   + D ++Y+ L+ 
Sbjct: 676 VLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIR 735

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMN-SLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           G  +   ++ A++ + +M+  G   +    N  L   L      E+D      ++F+KM 
Sbjct: 736 GYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERD------ELFDKMK 789

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +     D  TY  +I   GK     E++      +  G +P+T T+N +I      GK+D
Sbjct: 790 ENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMD 849

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
           +A  LL  M      PS ++YD+LI     L K  D
Sbjct: 850 QARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPD 885



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 153/327 (46%), Gaps = 38/327 (11%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           PNV T  +LV++ CK G L  AL++L     +  + +  TYN ++ G C  G V +A+  
Sbjct: 43  PNVYTHNVLVHAWCKMGNLILALDLLRN---VDVEVDTVTYNTVIWGFCQHGLVNQAFGF 99

Query: 213 L-MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           L + VK D    D  T   ++ GFC++G +     +++  +  G   +V+ FNTL +GYC
Sbjct: 100 LSIMVKKDTC-FDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYC 158

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR-------F 324
           K G     + L++ M+K   L D +SY+TL+NG  K G+   A S+  E+          
Sbjct: 159 KAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSV 218

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
            F +D+R+       L      E DL+                    TY  +I T  K  
Sbjct: 219 FFNIDDRIKKDDNLNL------EADLI--------------------TYTTIISTYCKQH 252

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             +EA       I  G +P  +T+++++  LC +G++ +A  LL  M +    P+  +Y 
Sbjct: 253 GLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYT 312

Query: 445 MLITKLDQLEKSYDACALYGAALKQGV 471
            LI  L +   +++A A     + +G+
Sbjct: 313 TLIDSLFKAGSAWEAFACQSQLVVRGM 339



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 167/363 (46%), Gaps = 19/363 (5%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + +N ++ A     E + A++ ++E  S+ + P+S T + ++       +  +A  V++ 
Sbjct: 588 ATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNE 647

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G HPN+    +L+N+  KSG+    L++ +Q+  +G K N + YN L+   C +  
Sbjct: 648 MSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRM 707

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            ++A  +L  +  DG   D  TY A++ G+C+     +A+    + +  GV+PN+VT+N 
Sbjct: 708 TKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNL 767

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L  G    G   +   L   MK+    PD  +Y TL++G  K G  + ++ ++ EMV  G
Sbjct: 768 LLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQG 827

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI-------- 377
           F       N L+       + +   ++ A ++  +M  +       TY I+I        
Sbjct: 828 FVPKTSTYNVLI-----SDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSK 882

Query: 378 -----RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
                RTL K  +TD   + +    + G +P   T   +       GK+  A  LL  ++
Sbjct: 883 HPDLDRTLKKIYRTDAKNL-ITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEIF 941

Query: 433 EHA 435
            HA
Sbjct: 942 SHA 944



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 165/378 (43%), Gaps = 30/378 (7%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           ++ T++ +I  +C      +A   +  M       +  T  ILV   C+ G  K    ++
Sbjct: 76  DTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIM 135

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D +   G   ++  +N L+ G C  G +  A +++  ++ +GL  D+ +Y  +++GFCK 
Sbjct: 136 DNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKR 195

Query: 239 GRSNEAMELLNEAIE-RGVTPNV--------------------VTFNTLFNGYCKEGTPM 277
           G  ++A  LL+E  E RGV  +V                    +T+ T+ + YCK+    
Sbjct: 196 GEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLE 255

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   L + M     LPD ++YS+++NGL K G++  A  + +EM + G + +     +L+
Sbjct: 256 EARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLI 315

Query: 338 RGL--CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
             L     +WE       A+    ++  +    D      ++  L K  K  EA      
Sbjct: 316 DSLFKAGSAWE-------AFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRA 368

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
             ++  IP +IT+  +I   C  G +++   LL  M E    P+  +Y  +I    +   
Sbjct: 369 LSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGI 428

Query: 456 SYDACALYGAALKQGVIP 473
             +A  +    L Q +IP
Sbjct: 429 LDEAINVMKKMLDQNIIP 446



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 1/257 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+     V  + +A  +++ +++ + +   G + ++     LL A     +    ++ 
Sbjct: 620 PSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQM 679

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             +    GL  N   ++ +I  +C      +A  V+  M  +G+  +  T+  L+   C+
Sbjct: 680 HEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCE 739

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           S  +K+AL    QM   G  PNI TYN LL GL   G + E  E+   +K +GL PD  T
Sbjct: 740 SSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDAST 799

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++ G+ K+G   E++ L  E + +G  P   T+N L + + K G   +   LL  M+
Sbjct: 800 YDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQ 859

Query: 288 KRNCLPDKISYSTLLNG 304
            R   P   +Y  L+ G
Sbjct: 860 VRGVPPSSSTYDILICG 876



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 13/236 (5%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P +  +  ++  F   G  ++  ++  E +   V PNV T N L + +CK G  +     
Sbjct: 8   PTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILA--- 64

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L L++  +   D ++Y+T++ G  + G +  A      MV+     D    N L++G C 
Sbjct: 65  LDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFC- 123

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
                  L +   ++ + +    +  D   +  +I    K  +   AL  +    + G +
Sbjct: 124 ----RIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLL 179

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
              +++N +I   C  G+ DKA  LL     H    SR   D +   +D   K  D
Sbjct: 180 SDIVSYNTLINGFCKRGEYDKAKSLL-----HEISESRGVKDSVFFNIDDRIKKDD 230


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 192/370 (51%), Gaps = 5/370 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           AV    +    G  P++ TF+ +I      N   EA  ++D M   G  P++ T+  +VN
Sbjct: 169 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVN 228

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK G +  AL +L +M +   + ++  YN ++ GLC    +++A+ +   ++  G++P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRP 288

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV+TY +++   C  GR ++A  LL+  IER + PNVVTF+ L + + KEG  ++   L 
Sbjct: 289 DVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M KR+  PD  +YS+L+NG     ++  A  +F+ M+      +    N+L++G C  
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC-- 406

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   +E+  ++F +M+++  V +  TY  +I+ L +    D A       +  G  P
Sbjct: 407 ---KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             IT++ ++  LC  GK++KAL++   + +    P   +Y+++I  + +  K  D   L+
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523

Query: 464 GAALKQGVIP 473
            +   +GV P
Sbjct: 524 CSLSLKGVKP 533



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 187/378 (49%), Gaps = 8/378 (2%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           ++ +  +N L+      ++   A+    +    G  P+  T S ++  YC+     +A  
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 171

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           ++D M + GY P+  TF  L++ L    +  EA+ ++DQM + GC+P++ TY  ++ GLC
Sbjct: 172 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLC 231

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G ++ A  +L  ++   ++ DV  Y  ++DG CK    ++A  L N+   +G+ P+V 
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVF 291

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+N+L +  C  G       LL  M +R   P+ +++S L++  +K GK+  A  ++ EM
Sbjct: 292 TYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           ++   + D    +SL+ G CM      D L++A  +FE M  K    +  TY  +I+   
Sbjct: 352 IKRSIDPDIFTYSSLINGFCM-----HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K K+ +E +       + G +  T+T+N +IQ L   G  D A  +   M      P   
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466

Query: 442 SYDML---ITKLDQLEKS 456
           +Y +L   + K  +LEK+
Sbjct: 467 TYSILLDGLCKYGKLEKA 484



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 192/390 (49%), Gaps = 7/390 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +   ++K      V  +N ++  L      + A   F++  + G+ P+ +T++ +I C
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            CN   + +A +++  M +   +PNV TF+ L+++  K G+L EA ++ D+M +    P+
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           I TY+ L+ G C   R++EA  M   + +    P+V TY  ++ GFCK  R  E MEL  
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E  +RG+  N VT+NTL  G  + G       + K M      PD I+YS LL+GL K+G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K+  A+ +F+ + +   E D    N ++ G+C     +   +ED + +F  ++ K    +
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC-----KAGKVEDGWDLFCSLSLKGVKPN 534

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
              Y  +I    +    +EA        E G +P +  +N +I+A   +G    +  L+ 
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIK 594

Query: 430 LMYEHAKIPSRTSYDMLITKLD--QLEKSY 457
            M     +   ++  M+I  L   +LEKSY
Sbjct: 595 EMRSCGFVGDASTISMVINMLHDGRLEKSY 624



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 201/408 (49%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + + D + + G       FN L+  L + N+   AV    +    G  P+  T+  
Sbjct: 166 ISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGA 225

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C + D   A  ++  M       +V  +  +++ LCK   + +A  + ++M   G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKG 285

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +P++ TYN L+  LC  GR  +A  +L N+    + P+V T++A++D F K G+  EA 
Sbjct: 286 IRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAE 345

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L +E I+R + P++ T+++L NG+C      +   + +LM  ++C P+ ++Y+TL+ G 
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++   + +F+EM + G   +    N+L++GL    ++  D  + A ++F+KM    
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL----FQAGD-CDMAQKIFKKMVSDG 460

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY I++  L K  K ++AL+   +  +    P   T+N +I+ +C  GK++   
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L   +      P+   Y  +I+   +     +A AL+    + G +P
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 169/356 (47%), Gaps = 8/356 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ ++  G    V  +N L+  L        A +  S      + PN  TFS +I  + 
Sbjct: 277 LFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFV 336

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    EA K+ D M      P++ T++ L+N  C   RL EA  + + M    C PN+ 
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+KG C   RVEE  E+   +   GL  +  TY  ++ G  + G  + A ++  + 
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  GV P+++T++ L +G CK G   K + + + ++K    PD  +Y+ ++ G+ K GK+
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
                +F  +   G + +  +  +++ G C      K L E+A  +F +M +  ++ D G
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFC-----RKGLKEEADALFREMKEDGTLPDSG 571

Query: 372 TYGIVIRT-LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
            Y  +IR  L  G K   A + +      G +    T + VI  L  +G+++K+ L
Sbjct: 572 CYNTLIRARLRDGDKAASAEL-IKEMRSCGFVGDASTISMVINML-HDGRLEKSYL 625



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 154/321 (47%), Gaps = 5/321 (1%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           ++ AS   +  ++ K NP  +     +D  +K   L E   ++D + K   +  +  ++ 
Sbjct: 306 WSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    M +  + A   F    S    PN  T++ +I+ +C      E  ++   M   G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              N  T+  L+  L ++G    A ++  +M   G  P+I TY+ LL GLC  G++E+A 
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   ++   ++PD+YTY  +++G CK G+  +  +L      +GV PNV+ + T+ +G+
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C++G   +   L + MK+   LPD   Y+TL+   L+ G    +  + KEM   GF  D 
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDA 605

Query: 331 R----MMNSLLRGLCMKSWEE 347
                ++N L  G   KS+ E
Sbjct: 606 STISMVINMLHDGRLEKSYLE 626



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 147/304 (48%), Gaps = 5/304 (1%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +L +A+ +  +M +    P+I  +N LL  +  + + +    +   ++N  +  D+Y+Y 
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++ FC+  +   A+ +L + ++ G  P++VT ++L NGYC        V L+  M + 
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD ++++TL++GL    K   AV++  +MV+ G + D     +++ GLC +   + D
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRG--DID 237

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
           L   A  + +KM K     D   Y  +I  L K K  D+A    +     G  P   T+N
Sbjct: 238 L---ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYN 294

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           ++I  LC  G+   A  LL  M E    P+  ++  LI    +  K  +A  LY   +K+
Sbjct: 295 SLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354

Query: 470 GVIP 473
            + P
Sbjct: 355 SIDP 358


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 206/445 (46%), Gaps = 30/445 (6%)

Query: 50  RSLQAQRFVD---RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN------- 99
           R L+ +R +    R  +  L + + +FD +       SV  FN LL A+  ++       
Sbjct: 11  RCLELERVIGSRARSGSLGLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTT 70

Query: 100 EQETAVKFFSE---ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
           E E  V  F+      +  + P+  T+SI+I C+C              +  +G+  N  
Sbjct: 71  ESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNI 130

Query: 157 TFTILVNSLCKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE---M 212
               L+  LC + RL EA+++L  +M  +GC P++ +YN LLKG C   R EEA E   M
Sbjct: 131 VINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHM 190

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           + + +     P+V +Y  V++GF   G+ ++A  L  E ++RG+ PNVVT+ T+ +G CK
Sbjct: 191 MADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK 250

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                +  G+ + M  +   PD  +Y+ L++G L  GK +  V + +EM   G + D   
Sbjct: 251 AQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             SLL  LC           +A  +F+ M +K    +   YGI+I     G  T  AL  
Sbjct: 311 YGSLLNYLC-----NNGRCREARFLFDSMIRKGIKPNVAIYGILIH----GYATKGALSE 361

Query: 393 LHH----AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           +H      +E G  P    FN +  A   +  ID+A+ +   M +    P   +Y  LI 
Sbjct: 362 MHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALID 421

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L +L +  DA   +   + +GV P
Sbjct: 422 ALCKLGRVDDAVLKFNQMMNEGVAP 446



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 204/469 (43%), Gaps = 41/469 (8%)

Query: 41  ESLDLKENPRSLQAQRFVDRIKASPLKERID-IFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E +D    P  +     +D +  + + +R + +F  +   G       +N L+   + + 
Sbjct: 228 EMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIG 287

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           + +  V+   E S++GL P+ +T+  ++   CN     EAR + D M   G  PNV  + 
Sbjct: 288 KWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYG 347

Query: 160 ILVNSLCKSGRLKE-----------------------------------ALEVLDQMGRI 184
           IL++     G L E                                   A+ + ++M + 
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  P++  Y  L+  LC +GRV++A      + N+G+ P+++ + +++ G C V +  +A
Sbjct: 408 GLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKA 467

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            E   E + +G+ P+VV FNT+    C +G  MK   L+ LM++    P  ISY+TL+ G
Sbjct: 468 KEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGG 527

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
               G+I  A      M+  G + DE   N+LL G C         ++DAY VF +M + 
Sbjct: 528 HCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC-----RAGRIDDAYGVFREMLRN 582

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
                  TY  ++  L   ++  EA     + I  G       +N ++  L     +D+A
Sbjct: 583 GITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEA 642

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L   +         T+++++I  L +  ++ DA  L+      G++P
Sbjct: 643 FKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 186/407 (45%), Gaps = 15/407 (3%)

Query: 63  ASPLKERIDIF-DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFF---SEASSYGLAP 118
           A  L E +DI    + + G    V  +N LL         E A++     +++      P
Sbjct: 142 AKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N  +++I+I  +  +    +A  +   M D G  PNV T+T +++ LCK+  +  A  V 
Sbjct: 202 NVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            QM   G KP+  TYNCL+ G   +G+ +E   ML  +   GLKPD YTY ++++  C  
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           GR  EA  L +  I +G+ PNV  +  L +GY  +G   +   LL LM +    PD   +
Sbjct: 322 GRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + +     K   I  A+ IF +M + G   D     +L+  LC     +  +L+    + 
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           E +   + V +   YG+   T+ K +K  E    +   +  G  P  + FN ++  LC +
Sbjct: 442 EGVAPNIFVFNSLVYGLC--TVDKWEKAKEFYFEM---LNQGIRPDVVFFNTILCNLCTK 496

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLI------TKLDQLEKSYDA 459
           G++ KA  L+ LM      P   SY  LI       ++D+  KS D 
Sbjct: 497 GQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDV 543



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 202/407 (49%), Gaps = 7/407 (1%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           F    K + + E + IF+ +K+ G +  V ++  L+ AL  L   + AV  F++  + G+
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGV 444

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           APN + F+ ++   C  + + +A++    M + G  P+V  F  ++ +LC  G++ +A  
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           ++D M R+G +P + +Y  L+ G C VGR++EA + L  + + GLKPD +TY  ++ G+C
Sbjct: 505 LIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + GR ++A  +  E +  G+TP VVT++T+ +G        +   L   M       +  
Sbjct: 565 RAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIW 624

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
            Y+ +LNGL K   +  A  +F+ +    F+++    N ++ G   KS       EDA  
Sbjct: 625 IYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMI-GALFKSGRN----EDAMH 679

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE-MGHIPRTITFNNVIQAL 415
           +F  ++    V D  TY ++   L +    +E    L  A+E  G  P +   N +++ L
Sbjct: 680 LFATISSYGLVPDVFTYCLIAENLIEEGYLEE-FDDLFSAMEKSGTTPNSRMLNALVRRL 738

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
              G I +A   L  + E       ++  MLI+ L + E  + A +L
Sbjct: 739 LHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 202/443 (45%), Gaps = 59/443 (13%)

Query: 45  LKENPRSLQAQRFVDRIKASPLKERIDIFDS-IKKDGTNWSVSDFNDLLMALVMLNEQET 103
           L  N R  +A+   D +    +K  + I+   I    T  ++S+ +DLL  +V       
Sbjct: 318 LCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMV------- 370

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
                      GL+P+   F+I+   Y  K    EA  + + M   G  P+V  +  L++
Sbjct: 371 ---------ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALID 421

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK GR+ +A+   +QM   G  PNI  +N L+ GLC V + E+A E    + N G++P
Sbjct: 422 ALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRP 481

Query: 224 DVY-----------------------------------TYTAVMDGFCKVGRSNEAMELL 248
           DV                                    +YT ++ G C VGR +EA + L
Sbjct: 482 DVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSL 541

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +  +  G+ P+  T+NTL +GYC+ G      G+ + M +    P  ++YST+L+GL   
Sbjct: 542 DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTT 601

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
            +   A  ++  M+  G + +  + N +L GL      + + +++A+++F+ +  K    
Sbjct: 602 RRFSEAKELYLNMITSGKQWNIWIYNIILNGL-----SKNNCVDEAFKLFQSLCSKDFQL 656

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAI-EMGHIPRTITFNNVIQALCGEGKIDKALLL 427
           +  T+ I+I  L K  + ++A+ HL   I   G +P   T+  + + L  EG +++   L
Sbjct: 657 EITTFNIMIGALFKSGRNEDAM-HLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDL 715

Query: 428 LFLMYEHAKIPSRTSYDMLITKL 450
              M +    P+    + L+ +L
Sbjct: 716 FSAMEKSGTTPNSRMLNALVRRL 738


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 185/389 (47%), Gaps = 5/389 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + +   I   +  +G       +N L+     L + + AV+ F E +S G+ PN+ 
Sbjct: 258 KARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTV 317

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T S  +   C      EAR+  D M   G+  N+ +++ L++    +G L +   + + M
Sbjct: 318 TCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLM 377

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  PN   +N L+ G    G V EA  +  +++  GL PDV TY AV+  FC++G  
Sbjct: 378 VRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSM 437

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++AM+  N  I++GV PN   +  L  G+C  G  +K   L+  ++ +   P  +S+++L
Sbjct: 438 DDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASL 497

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +N L K G++  A  IF  ++R G + D  +  SL+ G C+        + +A++V + M
Sbjct: 498 INHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGK-----MSEAFRVHDAM 552

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  D  TYG ++    K  + D+ LI     +  G  P T T+  ++  L   G+ 
Sbjct: 553 VSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRT 612

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             A  +   M E     +  +Y +L+T L
Sbjct: 613 AAAKEMFQEMIESGIAVTIPTYSILLTGL 641



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 200/444 (45%), Gaps = 43/444 (9%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++    FV  + K   ++E  + FDS+   G   ++  ++ LL               
Sbjct: 314 PNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNL 373

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F+     G+ PN   F+I++  Y       EA  + + M   G +P+V T+  ++++ C+
Sbjct: 374 FNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCR 433

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP---- 223
            G + +A++  + M   G +PN   Y CL++G C  G + +A E++  ++N GL P    
Sbjct: 434 MGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILS 493

Query: 224 -------------------------------DVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
                                          DV  +T+++DG+C +G+ +EA  + +  +
Sbjct: 494 FASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMV 553

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
             G+ P++VT+ TL NG CK G    G+ L + +  +   P   +Y  +L+GL   G+  
Sbjct: 554 SVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTA 613

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A  +F+EM+  G  V     + LL GLC       +  E+A  VF+K+       D   
Sbjct: 614 AAKEMFQEMIESGIAVTIPTYSILLTGLC-----RNNCTEEAITVFQKLCAMNVKFDIVI 668

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
             I+I  + K ++ +EA        + G +P   T+  +++ L  EG +++A  +  +M 
Sbjct: 669 LNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVML 728

Query: 433 EHAKIPSRTSYDMLITKLDQLEKS 456
           +    P+    ++++  L  LEK 
Sbjct: 729 KSGLSPTSHFINVIVRTL--LEKG 750



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 174/363 (47%), Gaps = 16/363 (4%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P  +T+SI+I C C       A     C+   G   +V   + L+  LC + R  EA++V
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 178 L-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML-MNVKNDGLKP-DVYTYTAVMDG 234
           L  +M  +GC P+  +Y+ +LK +C  GR + A ++L M VK  G  P +V  Y+ V+ G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
             K G+  EA +L +E  ++GV PNVVT+N++ +  CK     K  G+L+ M      PD
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++Y+TL++G    G+ + AV +FKEM   G   +    ++ +  LC     +   +E+A
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLC-----KHGRIEEA 335

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNN 410
            + F+ M  K    +  +Y     TL  G  T   L+ + +   +    G +P    FN 
Sbjct: 336 REFFDSMLAKGHKLNIISYS----TLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNI 391

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           ++      G + +A+ +   M +    P   +Y  +I    ++    DA   +   + +G
Sbjct: 392 LVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKG 451

Query: 471 VIP 473
           V P
Sbjct: 452 VEP 454



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 185/423 (43%), Gaps = 32/423 (7%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   +V  ++ ++  L    +   A   F E +  G+ PN  T++ +I   C      +A
Sbjct: 206 GCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKA 265

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
           + ++  M  NG  P+  T+  L++     G+ K+A+ +  +M   G  PN  T +  +  
Sbjct: 266 QGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAF 325

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC  GR+EEA E   ++   G K ++ +Y+ ++ G+   G   +   L N  +  G+ PN
Sbjct: 326 LCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPN 385

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
              FN L NGY K G   + + + + M+KR   PD ++Y  +++   + G +  A+  F 
Sbjct: 386 QHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFN 445

Query: 320 EMVRFGFEVDERMMNSLLRGLC-----MKSWE-------------------------EKD 349
            M+  G E +  +   L++G C     +K+ E                         ++ 
Sbjct: 446 HMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEG 505

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA-IEMGHIPRTITF 408
            + +A ++F+ + +     D   +  +I       K  EA   +H A + +G  P  +T+
Sbjct: 506 RVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAF-RVHDAMVSVGIEPDIVTY 564

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
             ++   C  G+ID  L+L   +      P+  +Y +++  L    ++  A  ++   ++
Sbjct: 565 GTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIE 624

Query: 469 QGV 471
            G+
Sbjct: 625 SGI 627



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/454 (22%), Positives = 193/454 (42%), Gaps = 51/454 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK-FFSEASSYGLAPNS 120
           +A  L      F  + + G    V   + LL  L      + AV   F      G  P++
Sbjct: 115 RARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDA 174

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMF--DNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
            ++S +++  C+      A  ++        G   NV  ++ +V+ L K G++ EA ++ 
Sbjct: 175 ISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLF 234

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            +M + G  PN+ TYN ++  LC    V++A  +L  +  +G++PD  TY  ++ G+  +
Sbjct: 235 HEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTL 294

Query: 239 GRSNEAMELLNEAIERGVTPNVVT-----------------------------------F 263
           G+  +A+ +  E   RGV PN VT                                   +
Sbjct: 295 GQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISY 354

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           +TL +GY   G  +    L  LM +   +P++  ++ L+NG  K G +R A+ IF++M +
Sbjct: 355 STLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQK 414

Query: 324 FGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR---T 379
            G   D     +++   C M S      ++DA   F  M  K    +   Y  +I+   T
Sbjct: 415 RGLNPDVLTYLAVIHAFCRMGS------MDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCT 468

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
            G   K +E +  + +    G  P  ++F ++I  LC EG++ +A  +  ++    +   
Sbjct: 469 HGDLVKAEELVYEIRNK---GLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKAD 525

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              +  LI     + K  +A  ++ A +  G+ P
Sbjct: 526 VNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEP 559



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/300 (20%), Positives = 128/300 (42%), Gaps = 20/300 (6%)

Query: 45  LKENPRSLQAQRFVDRIKASPLKERIDIF--------------------DSIKKDGTNWS 84
           L +  R  +AQR  D I  +  K  ++IF                    D++   G    
Sbjct: 501 LCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPD 560

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  +  L+         +  +  F E    G+ P ++T+ I++    +      A+++  
Sbjct: 561 IVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQ 620

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M ++G    + T++IL+  LC++   +EA+ V  ++  +  K +I   N ++  +    
Sbjct: 621 EMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKAR 680

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R EEA  +  ++ + GL P V TYT +M+   K G   EA  + +  ++ G++P     N
Sbjct: 681 RREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFIN 740

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            +     ++G  +K    +  +  ++ L +  + S LL+     GK R  +++     +F
Sbjct: 741 VIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNLLPAKYQF 800


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 178/378 (47%), Gaps = 6/378 (1%)

Query: 87  DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           DF  L   +V +    T +       S G+ P+ +T +I+I C C+ N       V+  M
Sbjct: 73  DFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVM 132

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
           F  G  P V TF  L+N LC  G +  A    D +  +G + N  TY  ++ GLC  G  
Sbjct: 133 FKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDT 192

Query: 207 EEAYEMLMNVKNDGLKPDVY-TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
             A   L  +K      DV   Y+ +MD  CK G   EA+ L +    +G+ P++V +N+
Sbjct: 193 SGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNS 252

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G C  G   +   LL  M ++  +P+  +++ L++   K G I  A +I   MV  G
Sbjct: 253 LIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVG 312

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            E D    NS++ G C+ S      + DA +VFE M  K  + +  TY  +I    K K 
Sbjct: 313 VEPDVVTYNSVISGHCLLSQ-----MGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKN 367

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            ++AL  L   +  G  P  +T++ +I   C  GK + A  L   M+EH + P+  +  +
Sbjct: 368 INKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAI 427

Query: 446 LITKLDQLEKSYDACALY 463
           ++  L + +   +A +L+
Sbjct: 428 ILDGLFKCQFHSEAISLF 445



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 180/345 (52%), Gaps = 5/345 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+  FS  +S G+ P+   ++ +I   CN   + EA  ++  M   G  PNV TF +LV+
Sbjct: 231 ALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVD 290

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           + CK G +  A  ++  M  +G +P++ TYN ++ G C + ++ +A ++   + + G  P
Sbjct: 291 NFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLP 350

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           ++ TY++++ G+CK    N+A+ LL E +  G+ P+VVT++TL  G+CK G P     L 
Sbjct: 351 NLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELF 410

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M + +  P+  + + +L+GL K      A+S+F+EM +   E++  + N +L G+C  
Sbjct: 411 CTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMC-- 468

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           S+ +   L DA ++F  +  K    D   Y  +I+ L K    D+A   L    E G +P
Sbjct: 469 SFGK---LNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLP 525

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
              T+N  ++ L     I ++   L LM         T+ ++LI+
Sbjct: 526 NEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLIS 570



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 183/411 (44%), Gaps = 41/411 (9%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND-- 135
           K G + +V  F  L+  L        A +F       G   NS+T+  +I   C   D  
Sbjct: 134 KIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTS 193

Query: 136 ----FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
               + E  K  +C  D      V  ++ +++SLCK G + EAL +   M   G +P++ 
Sbjct: 194 GAILYLEKIKGRNCDLDV-----VIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLV 248

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            YN L+ GLC  GR +EA  +L N+   G+ P+V T+  ++D FCK G  + A  ++   
Sbjct: 249 AYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFM 308

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  GV P+VVT+N++ +G+C        V + +LM  +  LP+ ++YS+L++G  K   I
Sbjct: 309 VHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNI 368

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE--KDLL------------------ 351
             A+ +  EMV  G   D    ++L+ G C     E  K+L                   
Sbjct: 369 NKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAII 428

Query: 352 ----------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                      +A  +F +M K     +   Y IV+  +    K ++A          G 
Sbjct: 429 LDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGI 488

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
               + +  +I+ LC EG +D A  LL  M E+  +P+  +Y++ +  L Q
Sbjct: 489 KIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQ 539



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 152/313 (48%), Gaps = 5/313 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E +++F  +   G    +  +N L+  L      + A          G+ PN  TF++++
Sbjct: 230 EALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLV 289

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             +C       A+ ++  M   G  P+V T+  +++  C   ++ +A++V + M   G  
Sbjct: 290 DNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFL 349

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN+ TY+ L+ G C    + +A  +L  + N GL PDV T++ ++ GFCK G+   A EL
Sbjct: 350 PNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKEL 409

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
                E    PN+ T   + +G  K     + + L + M+K N   + + Y+ +L+G+  
Sbjct: 410 FCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCS 469

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
           +GK+  A  +F  +   G ++D     ++++GLC     ++ LL+DA  +  KM +   +
Sbjct: 470 FGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLC-----KEGLLDDAENLLMKMEENGCL 524

Query: 368 TDPGTYGIVIRTL 380
            +  TY + +R L
Sbjct: 525 PNEFTYNVFVRGL 537



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 142/323 (43%), Gaps = 8/323 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P    FT L   + K       + ++  +  +G KP++ T   ++  LC++      + +
Sbjct: 69  PREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSV 128

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G+ P V T+  +++G C  G    A    +   + G   N  T+  + NG CK
Sbjct: 129 LGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCK 188

Query: 273 EGTPMKGVGLLKLMKKRNC-LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
            G     +  L+ +K RNC L   I+YST+++ L K G +  A+++F  M   G + D  
Sbjct: 189 AGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLV 248

Query: 332 MMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
             NSL+ GLC    W+E      A  +   M +K  + +  T+ +++    K      A 
Sbjct: 249 AYNSLIHGLCNFGRWKE------ATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAK 302

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             +   + +G  P  +T+N+VI   C   ++  A+ +  LM     +P+  +Y  LI   
Sbjct: 303 TIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGW 362

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            + +    A  L G  +  G+ P
Sbjct: 363 CKTKNINKALFLLGEMVNSGLNP 385



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 35/259 (13%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V  +N ++    +L++   AVK F      G  PN  T+S +I  +C   +  +A
Sbjct: 312 GVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKA 371

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT------- 192
             ++  M ++G +P+V T++ L+   CK+G+ + A E+   M      PN+QT       
Sbjct: 372 LFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDG 431

Query: 193 ----------------------------YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
                                       YN +L G+C  G++ +A E+   + + G+K D
Sbjct: 432 LFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKID 491

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V  YT ++ G CK G  ++A  LL +  E G  PN  T+N    G  +     +    L 
Sbjct: 492 VVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLL 551

Query: 285 LMKKRNCLPDKISYSTLLN 303
           LMK +    D  +   L++
Sbjct: 552 LMKGKGLSADATTTELLIS 570



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 1/148 (0%)

Query: 101 QETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
              A+  F E     L  N   ++I++   C+     +A+++  C+   G   +V  +T 
Sbjct: 438 HSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTT 497

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           ++  LCK G L +A  +L +M   GC PN  TYN  ++GL     +  + + L+ +K  G
Sbjct: 498 MIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKG 557

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           L  D  T T ++  +    + N A+ + 
Sbjct: 558 LSADA-TTTELLISYFSANKENSALHVF 584



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 18/238 (7%)

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A+   ++ +     P    F  LF    K       + L+K +      PD  + + ++N
Sbjct: 55  ALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIIN 114

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-----MKSWEEKDLLED-AYQV 357
            L          S+   M + G +       +L+ GLC      ++    D LED  +Q 
Sbjct: 115 CLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQ- 173

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG-HIPRTITFNNVIQALC 416
                     ++  TYG +I  L K   T  A+++L         +   I ++ ++ +LC
Sbjct: 174 ----------SNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLC 223

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            +G + +AL L   M      P   +Y+ LI  L    +  +A  L G  +++G++P 
Sbjct: 224 KDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPN 281


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 194/395 (49%), Gaps = 9/395 (2%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L   +++FD + K G   S+   N LL  LV   +   A   + +    G+ P+ +T
Sbjct: 161 AGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFT 220

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
            +IM + YC      +A + ++ M   G   N+  +  +++  C  G  ++A  +L+ + 
Sbjct: 221 VAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQ 280

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKVGRS 241
           R G  PN+ TY  L+KG C  GR+EEA  ++  +K  G +  D   Y  +++G+C+ GR 
Sbjct: 281 RKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRM 340

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A  + NE  + G+  N+  +NT+ NG CK G   +   +L+ M+     PDK SY+TL
Sbjct: 341 DDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTL 400

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  + G +R A  + + MVR G        N+LL+G C         ++DA +++  M
Sbjct: 401 IDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC-----SLHAIDDALRLWFLM 455

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K+    +  +   ++  L K  KT++AL      +  G     ITFN VI  LC  G++
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQL 453
            +A  LL  M E    P   +Y  L     KL QL
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 185/419 (44%), Gaps = 43/419 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG-LAPNSWTFSIMIRCY 130
           I +S+++ G + +V  +  L+         E A +   E    G +  +   + +MI  Y
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +    +A +V + M D G H N+  +  ++N LCK GR++E  +VL +M  +G +P+ 
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC-------------- 236
            +YN L+ G C  G + +A+EM   +  +GL     TY  ++ GFC              
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454

Query: 237 ---------------------KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
                                K G++ +A+ L  E + RG+  NV+TFNT+ NG CK G 
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   LL  MK+  C PD ++Y TL +G  K G++  A  +  +M   GF     M NS
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574

Query: 336 LLRG-LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            + G    K W + +       +  +M+ +    +  TYG +I    K     EA     
Sbjct: 575 FITGHFIAKQWHKVN------DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYF 628

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
             +  G  P     + ++     EGK+D+A L+L  +     IP  +   + I K+  +
Sbjct: 629 EMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHV 687



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 170/351 (48%), Gaps = 6/351 (1%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F +++R + +      A  V D M   G  P++ +   L+N L +SG    A  V  QM
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  T   + K  C  GRV +A E +  ++  GL+ ++  Y AVMD +C +G +
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYST 300
            +A  +L     +G++PNVVT+  L  GYCK+G   +   ++K MK+  + + D+++Y  
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++NG  + G++  A  +  EM   G  V+  + N+++ GLC     +   +E+  +V ++
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLC-----KLGRMEEVQKVLQE 384

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M       D  +Y  +I    +     +A       +  G    T+T+N +++  C    
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           ID AL L FLM +    P+  S   L+  L +  K+  A  L+   L +G+
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGL 495



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/439 (23%), Positives = 194/439 (44%), Gaps = 31/439 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   +++  ++   + ++G   +   +N LL     L+  + A++ +      G+APN  
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           + S ++          +A  +       G   NV TF  ++N LCK GR+ EA E+LD+M
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             + C P+  TY  L  G C +G++  A  ++  +++ G  P V  + + + G     + 
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++  ++ +E   RG++PN+VT+  L  G+CKEG   +   L   M      P+    S L
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFG---------FEVDE-----------------RMMNS 335
           ++   K GK+  A  + +++V             E+D+                  M N 
Sbjct: 646 MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNV 705

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           ++ GLC     +   + DA  +FE +  K  + D  TY  +I         DEA      
Sbjct: 706 IIFGLC-----KSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
            +  G  P  IT+N++I  LC  GK+ +A+ L   +      P+  +Y+ LI +  +  K
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820

Query: 456 SYDACALYGAALKQGVIPQ 474
           + +A  L    +++G + +
Sbjct: 821 TTEAFKLKQKMVEEGYMEE 839



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 146/310 (47%), Gaps = 27/310 (8%)

Query: 44  DLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQE 102
           +L+  P SL  +   D   K   L     + + ++  G   SV  FN  +    +  +  
Sbjct: 527 ELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWH 586

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
                 SE S+ GL+PN  T+  +I  +C + +  EA  +   M +NG +PNV   + L+
Sbjct: 587 KVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALM 646

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKP--NIQT------------------------YNCL 196
           +   K G++ EA  VL ++  I   P  +I T                        +N +
Sbjct: 647 SCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVI 706

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           + GLC  GR+ +A  +  +++N    PD +TY++++ G    G  +EA  L +  +  G+
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
           TPN++T+N+L  G CK G   + V L   ++ +   P+ I+Y+TL++   K GK   A  
Sbjct: 767 TPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFK 826

Query: 317 IFKEMVRFGF 326
           + ++MV  G+
Sbjct: 827 LKQKMVEEGY 836



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/463 (21%), Positives = 188/463 (40%), Gaps = 66/463 (14%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + + ++  G + ++  +N ++  L  L   E   K   E    G+ P+ ++++ +I  YC
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYC 405

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    +A ++   M  NG      T+  L+   C    + +AL +   M + G  PN  
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           + + LL GL   G+ E+A  +       GL  +V T+  V++G CK+GR  EA ELL+  
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK----------------------- 288
            E    P+ +T+ TLF+GYCK G       L+  M+                        
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585

Query: 289 ------------RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                       R   P+ ++Y  L+ G  K G +  A +++ EMV  G   +  + ++L
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTK----------------------KVSVTDPGT-- 372
                M  + ++  +++A  V +K+                         ++  +P +  
Sbjct: 646 -----MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSAN 700

Query: 373 --YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             + ++I  L K  +  +A            +P   T++++I      G ID+A  L  +
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M      P+  +Y+ LI  L +  K   A  L+     +G+ P
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISP 803



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 101/449 (22%), Positives = 180/449 (40%), Gaps = 57/449 (12%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + KA   ++ ++++      G   +V  FN ++  L  +     A + 
Sbjct: 462 PNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEEL 521

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
                     P+S T+  +   YC       A  +++ M   G+ P+V  F   +     
Sbjct: 522 LDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFI 581

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           + +  +  ++  +M   G  PN+ TY  L+ G C  G + EA  +   + N+G+ P+V+ 
Sbjct: 582 AKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFI 641

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV--------------------------V 261
            +A+M  F K G+ +EA  +L + +   + P                            V
Sbjct: 642 CSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANV 701

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            +N +  G CK G       L + ++ +  LPD  +YS+L++G    G I  A S+   M
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +  G   +    NSL+ GLC     +   L  A  +F K+  K    +  TY  +I    
Sbjct: 762 LSAGLTPNIITYNSLIYGLC-----KSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYC 816

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K  KT EA                     + Q +  EG +++A+ LL  M E+   P+  
Sbjct: 817 KEGKTTEAF-------------------KLKQKMVEEGYMEEAIKLLDQMIENNVDPNYI 857

Query: 442 SYDMLI------TKLDQLEKSYDACALYG 464
           +Y  LI        ++++ K YD   + G
Sbjct: 858 TYCTLIHGYIKSGNMEEISKLYDEMHIRG 886



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 24/209 (11%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++++I   C      +A+ + + + +  + P+  T++ L++    SG + EA  + D M 
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G  PNI TYN L+ GLC  G++  A  +   +++ G+ P+  TY  ++D +CK G++ 
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822

Query: 243 EA----------------MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           EA                ++LL++ IE  V PN +T+ TL +GY K G   +   L   M
Sbjct: 823 EAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEM 882

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             R  LP         N +  W +  P V
Sbjct: 883 HIRGLLPT--------NWIGNWKRSDPVV 903



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 48/252 (19%), Positives = 93/252 (36%), Gaps = 54/252 (21%)

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNE-------------AIERGVTPNVVTFNTLFN 268
           +P + ++  ++    +  R ++A  LL+               + R  T + V+F+ L  
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW-------------------- 308
            +   G     + +   M K  C P   S + LLN L++                     
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216

Query: 309 ---------------GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
                          G++  AV   +EM   G EV+    ++++   C   W      ED
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT-----ED 271

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVI 412
           A ++ E + +K    +  TY ++++   K  + +EA   +    E G I    + +  +I
Sbjct: 272 ARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMI 331

Query: 413 QALCGEGKIDKA 424
              C  G++D A
Sbjct: 332 NGYCQRGRMDDA 343


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 193/397 (48%), Gaps = 11/397 (2%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G + +    N L+    ++   +      ++    GL P   TF+ +I   C   +F +A
Sbjct: 121 GLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQA 180

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            ++ D M   G  P+V T+T ++N LCK G    A  ++ +MG +GC+P++ TY+ L+  
Sbjct: 181 LELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDS 240

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC    V EA ++   +K  G+ P V +YT+++ G C   R  EA  +LNE     + P+
Sbjct: 241 LCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPD 300

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           +VTF+ L + +CKEG  ++  G+LK M +    P+ I+Y++L++G     ++  A  +F 
Sbjct: 301 IVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFD 360

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            M+  G + D    + L+ G CM        +++A Q+F +M  +    +  +Y  +I  
Sbjct: 361 VMITRGCKPDVFSYSILINGYCMVKR-----IDEAKQLFNEMIHQGLTPNTVSYTTLIHA 415

Query: 380 ---LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
              LGK ++  E    +H     G++P   T++ +++  C +G + KA  L   M     
Sbjct: 416 FCQLGKLREARELFKDMHTN---GYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYL 472

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            P+   Y +LI  + +      A  L+      G+ P
Sbjct: 473 KPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQP 509



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 172/325 (52%), Gaps = 5/325 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E +DIF  +K  G + +V  +  L+  L   +  + A    +E +S  + P+  TFS+
Sbjct: 247 VNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSL 306

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C + +  EA+ V+  M + G  PNV T+  L++       + EA ++ D M   G
Sbjct: 307 LIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRG 366

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CKP++ +Y+ L+ G C V R++EA ++   + + GL P+  +YT ++  FC++G+  EA 
Sbjct: 367 CKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAR 426

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           EL  +    G  P++ T++ L  G+CK+G   K   L + M+     P+ + Y+ L++ +
Sbjct: 427 ELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSM 486

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +  A  +F E+   G + D ++  +++ GLC     ++ LL++A + F KM +  
Sbjct: 487 CKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLC-----KEGLLDEALEAFRKMEEDG 541

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEAL 390
              +  +Y ++IR   + K    A+
Sbjct: 542 CPPNEFSYNVIIRGFLQHKDESRAV 566



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 184/411 (44%), Gaps = 5/411 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA    + +++FD +   G    V  +  ++  L  + E   A     +    G  P+  
Sbjct: 173 KAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVV 232

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I   C      EA  +   M   G  P V ++T L+  LC   R KEA  +L++M
Sbjct: 233 TYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEM 292

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +   P+I T++ L+   C  G V EA  +L  +   G++P+V TY ++M G+      
Sbjct: 293 TSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEV 352

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +L +  I RG  P+V +++ L NGYC      +   L   M  +   P+ +SY+TL
Sbjct: 353 VEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTL 412

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++   + GK+R A  +FK+M   G+  D    + LL G C + +     L  A+++F  M
Sbjct: 413 IHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGY-----LGKAFRLFRAM 467

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  +   Y I+I ++ K    + A          G  P    +  +I  LC EG +
Sbjct: 468 QGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLL 527

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           D+AL     M E    P+  SY+++I    Q +    A  L G    +G +
Sbjct: 528 DEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFV 578



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 153/299 (51%), Gaps = 3/299 (1%)

Query: 33  AAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDL 91
           A+A L+   SL++   P  +     +D   K   + E   +  ++ + G   +V  +N L
Sbjct: 285 ASAMLNEMTSLNIM--PDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSL 342

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           +    +  E   A K F    + G  P+ +++SI+I  YC      EA+++ + M   G 
Sbjct: 343 MHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGL 402

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            PN  ++T L+++ C+ G+L+EA E+   M   G  P++ TY+ LL+G C  G + +A+ 
Sbjct: 403 TPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFR 462

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +   ++   LKP++  YT ++D  CK G  N A +L +E    G+ P+V  + T+ NG C
Sbjct: 463 LFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLC 522

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           KEG   + +   + M++  C P++ SY+ ++ G L+      AV +  EM   GF  DE
Sbjct: 523 KEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADE 581


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 194/395 (49%), Gaps = 9/395 (2%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L   +++FD + K G   S+   N LL  LV   +   A   + +    G+ P+ +T
Sbjct: 161 AGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFT 220

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
            +IM + YC      +A + ++ M   G   N+  +  +++  C  G  ++A  +L+ + 
Sbjct: 221 VAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQ 280

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKVGRS 241
           R G  PN+ TY  L+KG C  GR+EEA  ++  +K  G +  D   Y  +++G+C+ GR 
Sbjct: 281 RKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRM 340

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A  + NE  + G+  N+  +NT+ NG CK G   +   +L+ M+     PDK SY+TL
Sbjct: 341 DDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTL 400

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  + G +R A  + + MVR G        N+LL+G C         ++DA +++  M
Sbjct: 401 IDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC-----SLHAIDDALRLWFLM 455

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K+    +  +   ++  L K  KT++AL      +  G     ITFN VI  LC  G++
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQL 453
            +A  LL  M E    P   +Y  L     KL QL
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 185/419 (44%), Gaps = 43/419 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG-LAPNSWTFSIMIRCY 130
           I +S+++ G + +V  +  L+         E A +   E    G +  +   + +MI  Y
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +    +A +V + M D G H N+  +  ++N LCK GR++E  +VL +M  +G +P+ 
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC-------------- 236
            +YN L+ G C  G + +A+EM   +  +GL     TY  ++ GFC              
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454

Query: 237 ---------------------KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
                                K G++ +A+ L  E + RG+  NV+TFNT+ NG CK G 
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   LL  MK+  C PD ++Y TL +G  K G++  A  +  +M   GF     M NS
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574

Query: 336 LLRG-LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            + G    K W + +       +  +M+ +    +  TYG +I    K     EA     
Sbjct: 575 FITGHFIAKQWHKVN------DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYF 628

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
             +  G  P     + ++     EGK+D+A L+L  +     IP  +   + I K+  +
Sbjct: 629 EMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHV 687



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 170/351 (48%), Gaps = 6/351 (1%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F +++R + +      A  V D M   G  P++ +   L+N L +SG    A  V  QM
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  T   + K  C  GRV +A E +  ++  GL+ ++  Y AVMD +C +G +
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYST 300
            +A  +L     +G++PNVVT+  L  GYCK+G   +   ++K MK+  + + D+++Y  
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++NG  + G++  A  +  EM   G  V+  + N+++ GLC     +   +E+  +V ++
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLC-----KLGRMEEVQKVLQE 384

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M       D  +Y  +I    +     +A       +  G    T+T+N +++  C    
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           ID AL L FLM +    P+  S   L+  L +  K+  A  L+   L +G+
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGL 495



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/438 (23%), Positives = 194/438 (44%), Gaps = 31/438 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   +++  ++   + ++G   +   +N LL     L+  + A++ +      G+APN  
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           + S ++          +A  +       G   NV TF  ++N LCK GR+ EA E+LD+M
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             + C P+  TY  L  G C +G++  A  ++  +++ G  P V  + + + G     + 
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++  ++ +E   RG++PN+VT+  L  G+CKEG   +   L   M      P+    S L
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFG---------FEVDE-----------------RMMNS 335
           ++   K GK+  A  + +++V             E+D+                  M N 
Sbjct: 646 MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNV 705

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           ++ GLC     +   + DA  +FE +  K  + D  TY  +I         DEA      
Sbjct: 706 IIFGLC-----KSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
            +  G  P  IT+N++I  LC  GK+ +A+ L   +      P+  +Y+ LI +  +  K
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820

Query: 456 SYDACALYGAALKQGVIP 473
           + +A  L    +++G+ P
Sbjct: 821 TTEAFKLKQKMVEEGIQP 838



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 189/449 (42%), Gaps = 38/449 (8%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + KA   ++ ++++      G   +V  FN ++  L  +     A + 
Sbjct: 462 PNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEEL 521

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
                     P+S T+  +   YC       A  +++ M   G+ P+V  F   +     
Sbjct: 522 LDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFI 581

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           + +  +  ++  +M   G  PN+ TY  L+ G C  G + EA  +   + N+G+ P+V+ 
Sbjct: 582 AKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFI 641

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV--------------------------V 261
            +A+M  F K G+ +EA  +L + +   + P                            V
Sbjct: 642 CSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANV 701

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            +N +  G CK G       L + ++ +  LPD  +YS+L++G    G I  A S+   M
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +  G   +    NSL+ GLC     +   L  A  +F K+  K    +  TY  +I    
Sbjct: 762 LSAGLTPNIITYNSLIYGLC-----KSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYC 816

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K  KT EA       +E G  P  IT++ +I  LC +G +++A+ LL  M E+   P+  
Sbjct: 817 KEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYI 876

Query: 442 SYDMLI------TKLDQLEKSYDACALYG 464
           +Y  LI        ++++ K YD   + G
Sbjct: 877 TYCTLIHGYIKSGNMEEISKLYDEMHIRG 905



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 172/372 (46%), Gaps = 32/372 (8%)

Query: 44  DLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQE 102
           +L+  P SL  +   D   K   L     + + ++  G   SV  FN  +    +  +  
Sbjct: 527 ELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWH 586

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
                 SE S+ GL+PN  T+  +I  +C + +  EA  +   M +NG +PNV   + L+
Sbjct: 587 KVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALM 646

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKP--NIQT------------------------YNCL 196
           +   K G++ EA  VL ++  I   P  +I T                        +N +
Sbjct: 647 SCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVI 706

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           + GLC  GR+ +A  +  +++N    PD +TY++++ G    G  +EA  L +  +  G+
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
           TPN++T+N+L  G CK G   + V L   ++ +   P+ I+Y+TL++   K GK   A  
Sbjct: 767 TPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFK 826

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           + ++MV  G +      + L+ GLC + +     +E+A ++ ++M +     +  TY  +
Sbjct: 827 LKQKMVEEGIQPTVITYSILIYGLCTQGY-----MEEAIKLLDQMIENNVDPNYITYCTL 881

Query: 377 IRTLGKGKKTDE 388
           I    K    +E
Sbjct: 882 IHGYIKSGNMEE 893



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/463 (21%), Positives = 188/463 (40%), Gaps = 66/463 (14%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + + ++  G + ++  +N ++  L  L   E   K   E    G+ P+ ++++ +I  YC
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYC 405

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    +A ++   M  NG      T+  L+   C    + +AL +   M + G  PN  
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           + + LL GL   G+ E+A  +       GL  +V T+  V++G CK+GR  EA ELL+  
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK----------------------- 288
            E    P+ +T+ TLF+GYCK G       L+  M+                        
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585

Query: 289 ------------RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                       R   P+ ++Y  L+ G  K G +  A +++ EMV  G   +  + ++L
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTK----------------------KVSVTDPGT-- 372
                M  + ++  +++A  V +K+                         ++  +P +  
Sbjct: 646 -----MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSAN 700

Query: 373 --YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             + ++I  L K  +  +A            +P   T++++I      G ID+A  L  +
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M      P+  +Y+ LI  L +  K   A  L+     +G+ P
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISP 803



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 8/244 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D+I     + +   +N ++  L        A   F    +    P+++T+S +I    
Sbjct: 687 VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA  + D M   G  PN+ T+  L+  LCKSG+L  A+ + +++   G  PN  
Sbjct: 747 ASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGI 806

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+   C  G+  EA+++   +  +G++P V TY+ ++ G C  G   EA++LL++ 
Sbjct: 807 TYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM 866

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           IE  V PN +T+ TL +GY K G   +   L   M  R  LP         N +  W + 
Sbjct: 867 IENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT--------NWIGNWKRS 918

Query: 312 RPAV 315
            P V
Sbjct: 919 DPVV 922



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 80/161 (49%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           +  + E   + D +   G   ++  +N L+  L    +   AV  F++  S G++PN  T
Sbjct: 748 SGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGIT 807

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  YC +    EA K+   M + G  P V T++IL+  LC  G ++EA+++LDQM 
Sbjct: 808 YNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMI 867

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
                PN  TY  L+ G    G +EE  ++   +   GL P
Sbjct: 868 ENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 11/182 (6%)

Query: 18  RNHNKIPQ---FNKLVVFAAASLSTAESLDLKE-------NPRSLQAQRFVDRI-KASPL 66
           RN   +P    ++ L+   AAS S  E+  L++        P  +     +  + K+  L
Sbjct: 727 RNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKL 786

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
              +++F+ ++  G + +   +N L+       +   A K   +    G+ P   T+SI+
Sbjct: 787 SRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSIL 846

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I   C +    EA K++D M +N   PN  T+  L++   KSG ++E  ++ D+M   G 
Sbjct: 847 IYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGL 906

Query: 187 KP 188
            P
Sbjct: 907 LP 908



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 48/252 (19%), Positives = 93/252 (36%), Gaps = 54/252 (21%)

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNE-------------AIERGVTPNVVTFNTLFN 268
           +P + ++  ++    +  R ++A  LL+               + R  T + V+F+ L  
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW-------------------- 308
            +   G     + +   M K  C P   S + LLN L++                     
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216

Query: 309 ---------------GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
                          G++  AV   +EM   G EV+    ++++   C   W      ED
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT-----ED 271

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVI 412
           A ++ E + +K    +  TY ++++   K  + +EA   +    E G I    + +  +I
Sbjct: 272 ARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMI 331

Query: 413 QALCGEGKIDKA 424
              C  G++D A
Sbjct: 332 NGYCQRGRMDDA 343


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 197/408 (48%), Gaps = 7/408 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     +  DG    V  +N L+  L        A K F   +  GL P   T+  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG HPN   F+IL+ +  K G++ +A+ V  +M + G 
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P+  TY  ++  LC  GRVE+A      + ++ L P    Y +++   C   + ++A E
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E ++RG+  + + FN++ + +CKEG  ++   L  LM +    PD I+YSTL++G  
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A  +   MV  G + D    N+L+ G C  S      +EDA  +F +M     
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR-----MEDALVLFREMESSGV 580

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY I+++ L + ++T  A        E G      T+N ++  LC     D+AL 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 427 LLF-LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   L     ++ +RT ++++I  L ++ ++ +A  L+ A    G++P
Sbjct: 641 MFQNLCLTDLQLETRT-FNIMIGALLKVGRNDEAKDLFAALSANGLVP 687



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 205/429 (47%), Gaps = 18/429 (4%)

Query: 58  VDRIKASPL-------KERIDIFDSIKKDGTNW----SVSDFNDLLMALVMLNEQETAVK 106
           VD I  +PL       K   D  D + +  T      +V  +N LL  L   N  + A++
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183

Query: 107 FFSEASSYG--LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
                   G    P+  +++ +I  +  + D  +A      M D G  PNV T++ ++ +
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           LCK+  + +A+EVL  M + G  PN +TYN ++ G C  G+ +EA   L  + +DG++PD
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V TY ++MD  CK GR  EA ++ +   +RG+ P + T+ TL  GY  +G  ++  GLL 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           LM +    P+   +S L+    K GK+  A+ +F +M + G   D     +++  LC   
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC--- 420

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
             +   +EDA + FE+M  +        Y  +I +L    K D+A   +   ++ G    
Sbjct: 421 --KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
           TI FN++I + C EG++ ++  L  LM      P   +Y  LI       K  +A  L  
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 465 AALKQGVIP 473
           + +  G+ P
Sbjct: 539 SMVSVGMKP 547



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 200/398 (50%), Gaps = 20/398 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N   +A V  +    AV  ++  +  G   + PN  T+ I+I 
Sbjct: 41  VFDELLRRGRGASIYGLN-CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIG 99

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
             C           +  +   G+  +   FT L+  LC   R  +A++ VL +M ++GC 
Sbjct: 100 SCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCI 159

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDGFCKVGRSNEAM 245
           PN+ +YN LLKGLC   R +EA E+L  + +DG    PDV +YT V++GF K G  ++A 
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
              +E ++RG+ PNVVT++++    CK     K + +L  M K   +P+  +Y+++++G 
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+ + A+   K+M   G E D    NSL+  LC     +     +A ++F+ MTK+ 
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC-----KNGRCTEARKMFDSMTKRG 334

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGKI 421
              +  TYG    TL +G  T  AL+ +H  +++    G  P    F+ +I A   +GK+
Sbjct: 335 LKPEITTYG----TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           D+A+L+   M +    P   +Y  +I  L +  +  DA
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 185/416 (44%), Gaps = 40/416 (9%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FDS+ K G    ++ +  LL                      G+ PN + FSI+I  Y 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    +A  V   M   G +P+  T+  ++  LCKSGR+++A+   +QM      P   
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGL------------------------------ 221
            YN L+  LC   + ++A E+++ + + G+                              
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 222 -----KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                KPD+ TY+ ++DG+C  G+ +EA +LL   +  G+ P+ VT+NTL NGYCK    
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
              + L + M+     PD I+Y+ +L GL +  +   A  ++  +   G +++    N +
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           L GLC     + +L ++A ++F+ +       +  T+ I+I  L K  + DEA       
Sbjct: 626 LHGLC-----KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
              G +P   T++ + + L  +G +++   L   M E+    +    + ++ KL Q
Sbjct: 681 SANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQ 736



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 188/384 (48%), Gaps = 10/384 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + +F  +++ G N     +  ++  L      E A+++F +     L+P + 
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C  + + +A+++I  M D G   +   F  +++S CK GR+ E+ ++ D M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            RIG KP+I TY+ L+ G C  G+++EA ++L ++ + G+KPD  TY  +++G+CK+ R 
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L  E    GV+P+++T+N +  G  +         L   + +     +  +Y+ +
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL--CMKSWEEKDLLEDAYQVFE 359
           L+GL K      A+ +F+ +     +++ R  N ++  L    ++ E KDL       F 
Sbjct: 626 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL-------FA 678

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            ++    V D  TY ++   L +    +E         E G    +   N++++ L   G
Sbjct: 679 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738

Query: 420 KIDKALLLLFLMYE-HAKIPSRTS 442
            I +A   LF++ E H  + + T+
Sbjct: 739 DITRAGTYLFMIDEKHFSLEASTA 762



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 149/343 (43%), Gaps = 47/343 (13%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK---PNIQTYN 194
           +AR V D +   G   ++      +  + +      A+   ++M R G     PN+ TY 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEAIE 253
            L+   C  GR++  +  L NV   G + D   +T ++ G C   R+++AM++ L    +
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR--NCLPDKISYSTLLNGLLKWGKI 311
            G  PNV ++N L  G C E    + + LL++M     +C PD +SY+T++NG  K G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD- 214

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
                                                  L+ AY  + +M  +  + +  
Sbjct: 215 ---------------------------------------LDKAYGTYHEMLDRGILPNVV 235

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L K +  D+A+  L   ++ G +P   T+N+++   C  G+  +A+  L  M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +     P   +Y+ L+  L +  +  +A  ++ +  K+G+ P+
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 72/163 (44%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +++  I + GT   +S +N +L  L   N  + A++ F       L   + TF+IMI   
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 664

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
                  EA+ +   +  NG  P+V T++++  +L + G L+E  ++   M   GC  N 
Sbjct: 665 LKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANS 724

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           +  N +++ L   G +  A   L  +       +  T +  +D
Sbjct: 725 RMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 192/421 (45%), Gaps = 45/421 (10%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+ AL+  N     V  +      G+ PN +T+++++R  C  N    ARK++D M 
Sbjct: 131 YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+  T+  +V+ LCK  RL EA EVL  M      P   +YN ++  LC   R++
Sbjct: 191 RKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQ 245

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF---- 263
           E + ++ ++   GL+P+V TYT ++D FCK G    A  +L   +  G TPNVVTF    
Sbjct: 246 EVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALV 305

Query: 264 -------------------------------NTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                                          N L  G C  G       +L  M++  C 
Sbjct: 306 RGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCF 365

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+  +YSTL++G  K G +  A+SI+ +M R G + +  +  +++   C     +K +  
Sbjct: 366 PNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFC-----KKLMFN 420

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A  + +KM  +    +  T+  +IR+L   ++   AL   H     G +P   T+N +I
Sbjct: 421 QAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELI 480

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             L  EG    AL ++  M  H    S  +Y+ +++ L Q   S +A    G  + QG+ 
Sbjct: 481 HGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQ 540

Query: 473 P 473
           P
Sbjct: 541 P 541



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 190/388 (48%), Gaps = 5/388 (1%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + +N +++AL      +      S+    GL PN  T++ ++  +C   +   A  ++  
Sbjct: 229 ASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILAR 288

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G  PNV TFT LV  L   GR+ +AL++   M   G  P+  +YN L++GLC VG 
Sbjct: 289 MVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGD 348

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++ A  +L +++  G  P+V TY+ ++DGF K G    A+ + N+    G  PNVV +  
Sbjct: 349 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 408

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + + +CK+    +   L+  M   NC P+ ++++TL+  L    ++  A+ +F EM R G
Sbjct: 409 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 468

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              + R  N L+ GL    + E +  +  + V E  +  + ++   TY  V+  L + + 
Sbjct: 469 CVPNGRTYNELIHGL----FREGNCGDALHMVTEMQSHGIELSLV-TYNTVVSGLCQTRM 523

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           + EA++ +   I  G  P   TF+ +I A C EG++  A  +L  M       +   Y +
Sbjct: 524 SREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTI 583

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           L+ +L   +K  DA       L +G+ P
Sbjct: 584 LMAELCNQDKLVDAMTYLLKMLYEGIYP 611



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 138/275 (50%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK    I +S+++ G   +V  ++ L+       +   A+  +++ S  G  PN   ++ 
Sbjct: 349 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 408

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           M+  +C K  F +A+ +ID M      PN  TF  L+ SLC   R+  AL V  +M R G
Sbjct: 409 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 468

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN +TYN L+ GL   G   +A  M+  +++ G++  + TY  V+ G C+   S EAM
Sbjct: 469 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 528

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
             + + I +G+ PN  TF+ + + YCKEG       +L  M   NC  + + Y+ L+  L
Sbjct: 529 VFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL 588

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
               K+  A++   +M+  G   +    N L+RG+
Sbjct: 589 CNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 623


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 210/414 (50%), Gaps = 8/414 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L++ + +   ++K G   ++S  N  +  LVM NE + A++F       G+APN  
Sbjct: 293 RAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVV 352

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+ YCN +   +A ++ID M   G  P+  ++  ++  LC+  RL E  E++ +M
Sbjct: 353 TYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKM 412

Query: 182 GRIGCK--PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            +   K  P+  TYN L++ L   G  +EA E+L   +    K D   Y+A++  +CK G
Sbjct: 413 -QTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEG 471

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           +  +A EL++E   +G  P+VVT+ ++ +G+C+ G   +   +++ M K +C P+ ++Y+
Sbjct: 472 KIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYT 531

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           T LNGL + GK   A    ++M+    E +    N++   + +     +  L +A  V  
Sbjct: 532 TFLNGLCRNGKSLEA----RKMMNMS-EEEWWTPNAITYSVVVHGLRREGKLNEACDVVR 586

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M  K    +P    +++ +L +  K  EA   L   +  G     + F  VI   C + 
Sbjct: 587 EMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKD 646

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++ AL LL  MY   K P   +Y  LI  L + ++  +A  L    L+QG++P
Sbjct: 647 DLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVP 700



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 179/381 (46%), Gaps = 42/381 (11%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L      + A++   EA       +   +S ++  YC +    +A++++  MF
Sbjct: 425 YNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMF 484

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V T+T +++  C+ G+L +A +++ QM +  CKPN  TY   L GLC  G+  
Sbjct: 485 SKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSL 544

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA +M+   + +   P+  TY+ V+ G  + G+ NEA +++ E I +G  PN V  N L 
Sbjct: 545 EARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLV 604

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +  C++G P +   LLK    + C  + ++++T+++G  +   +  A+S+  +M      
Sbjct: 605 HSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY----- 659

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                       LC K                         D  TY  +I  L K  + +
Sbjct: 660 ------------LCNKH-----------------------PDTVTYTALIDALAKTDRIE 684

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA       +  G +P  +T+ +VI   C +G+++  L LL  M   ++   +T+Y+++I
Sbjct: 685 EATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRF--QTAYNLVI 742

Query: 448 TKLDQLEKSYDACALYGAALK 468
            KL +     +A +L G  L+
Sbjct: 743 EKLCKFGYLEEANSLLGEVLR 763



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/422 (22%), Positives = 183/422 (43%), Gaps = 54/422 (12%)

Query: 26  FNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPL----------KERIDIFDS 75
           +N L+   +      E+L++ +    L+ +  VD+++ S +          ++  ++   
Sbjct: 425 YNSLIQMLSKHGHGDEALEILQEAEKLRFK--VDKVEYSAIVHAYCKEGKIQKAKELVSE 482

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +   G +  V  +  +L     + + + A K   +   +   PN+ T++  +   C    
Sbjct: 483 MFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGK 542

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EARK+++   +  + PN  T++++V+ L + G+L EA +V+ +M   G  PN    N 
Sbjct: 543 SLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINL 602

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC------------------- 236
           L+  LC  G+  EA ++L    N G   +V  +T V+ GFC                   
Sbjct: 603 LVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCN 662

Query: 237 ----------------KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
                           K  R  EA EL  + + +G+ P+ VT+ ++ + YC++G     +
Sbjct: 663 KHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLL 722

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            LLK M  ++    + +Y+ ++  L K+G +  A S+  E++R     D +  + L    
Sbjct: 723 KLLKKMLLKSRF--QTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVL---- 776

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            M+S+    +   AY+V  +M  +  + D      V + L    K +EA   +   +E G
Sbjct: 777 -MESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERG 835

Query: 401 HI 402
           H+
Sbjct: 836 HV 837


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 197/408 (48%), Gaps = 7/408 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     +  DG    V  +N L+  L        A K F   +  GL P   T+  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG HPN   F+IL+ +  K G++ +A+ V  +M + G 
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P+  TY  ++  LC  GRVE+A      + ++ L P    Y +++   C   + ++A E
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E ++RG+  + + FN++ + +CKEG  ++   L  LM +    PD I+YSTL++G  
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A  +   MV  G + D    N+L+ G C  S      +EDA  +F +M     
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR-----MEDALVLFREMESSGV 580

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY I+++ L + ++T  A        E G      T+N ++  LC     D+AL 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 427 LLF-LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   L     ++ +RT ++++I  L ++ ++ +A  L+ A    G++P
Sbjct: 641 MFQNLCLTDLQLETRT-FNIMIGALLKVGRNDEAKDLFAALSANGLVP 687



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 206/429 (48%), Gaps = 18/429 (4%)

Query: 58  VDRIKASPL-------KERIDIFDSIKKDGTNW----SVSDFNDLLMALVMLNEQETAVK 106
           VD I  +PL       K   D  D + +  T      +V  +N LL  L   N  + A++
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183

Query: 107 FFSEASSYG--LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
                   G    P+  +++ +I  +  + D  +A      M D G  PNV T++ ++ +
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           LCK+  + +A+EVL  M + G  PN +TYN ++ G C  G+ +EA   L  + +DG++PD
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V TY ++MD  CK GR  EA ++ +   +RG+ P + T+ TL  GY  +G  ++  GLL 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           LM +    P+   +S L+    K GK+  A+ +F +M + G   D     +++  LC KS
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC-KS 422

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
                 +EDA + FE+M  +        Y  +I +L    K D+A   +   ++ G    
Sbjct: 423 GR----VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
           TI FN++I + C EG++ ++  L  LM      P   +Y  LI       K  +A  L  
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 465 AALKQGVIP 473
           + +  G+ P
Sbjct: 539 SMVSVGMKP 547



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 200/398 (50%), Gaps = 20/398 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N   +A V  +    AV  ++  +  G   + PN  T+ I+I 
Sbjct: 41  VFDELLRRGRGASIYGLN-CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIG 99

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
             C           +  +   G+  +   FT L+  LC   R  +A++ VL +M ++GC 
Sbjct: 100 SCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCI 159

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDGFCKVGRSNEAM 245
           PN+ +YN LLKGLC   R +EA E+L  + +DG    PDV +YT V++GF K G  ++A 
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
              +E ++RG+ PNVVT++++    CK     K + +L  M K   +P+  +Y+++++G 
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+ + A+   K+M   G E D    NSL+  LC     +     +A ++F+ MTK+ 
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC-----KNGRCTEARKMFDSMTKRG 334

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGKI 421
              +  TYG    TL +G  T  AL+ +H  +++    G  P    F+ +I A   +GK+
Sbjct: 335 LKPEITTYG----TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           D+A+L+   M +    P   +Y  +I  L +  +  DA
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 171/383 (44%), Gaps = 40/383 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FDS+ K G    ++ +  LL                      G+ PN + FSI+I  Y 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    +A  V   M   G +P+  T+  ++  LCKSGR+++A+   +QM      P   
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGL------------------------------ 221
            YN L+  LC   + ++A E+++ + + G+                              
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 222 -----KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                KPD+ TY+ ++DG+C  G+ +EA +LL   +  G+ P+ VT+NTL NGYCK    
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
              + L + M+     PD I+Y+ +L GL +  +   A  ++  +   G +++    N +
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           L GLC     + +L ++A ++F+ +       +  T+ I+I  L K  + DEA       
Sbjct: 626 LHGLC-----KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680

Query: 397 IEMGHIPRTITFNNVIQALCGEG 419
              G +P   T++ + + L  +G
Sbjct: 681 SANGLVPDVRTYSLMAENLIEQG 703



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 188/384 (48%), Gaps = 10/384 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + +F  +++ G N     +  ++  L      E A+++F +     L+P + 
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C  + + +A+++I  M D G   +   F  +++S CK GR+ E+ ++ D M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            RIG KP+I TY+ L+ G C  G+++EA ++L ++ + G+KPD  TY  +++G+CK+ R 
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L  E    GV+P+++T+N +  G  +         L   + +     +  +Y+ +
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLEDAYQVFE 359
           L+GL K      A+ +F+ +     +++ R  N ++  L    ++ E KDL       F 
Sbjct: 626 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL-------FA 678

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            ++    V D  TY ++   L +    +E         E G    +   N++++ L   G
Sbjct: 679 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738

Query: 420 KIDKALLLLFLMYE-HAKIPSRTS 442
            I +A   LF++ E H  + + T+
Sbjct: 739 DITRAGTYLFMIDEKHFSLEASTA 762



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 149/343 (43%), Gaps = 47/343 (13%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC---KPNIQTYN 194
           +AR V D +   G   ++      +  + +      A+   ++M R G     PN+ TY 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEAIE 253
            L+   C  GR++  +  L NV   G + D   +T ++ G C   R+++AM++ L    +
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR--NCLPDKISYSTLLNGLLKWGKI 311
            G  PNV ++N L  G C E    + + LL++M     +C PD +SY+T++NG  K G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD- 214

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
                                                  L+ AY  + +M  +  + +  
Sbjct: 215 ---------------------------------------LDKAYGTYHEMLDRGILPNVV 235

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L K +  D+A+  L   ++ G +P   T+N+++   C  G+  +A+  L  M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +     P   +Y+ L+  L +  +  +A  ++ +  K+G+ P+
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 4/165 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +++  I + GT   +S +N +L  L   N  + A++ F       L   + TF+IMI   
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 664

Query: 131 --CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
               +ND  EA+ +   +  NG  P+V T++++  +L + G L+E  ++   M   GC  
Sbjct: 665 LKVGRND--EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           N +  N +++ L   G +  A   L  +       +  T +  +D
Sbjct: 723 NSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 193/412 (46%), Gaps = 6/412 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +++ D + + G    V  +N L+  L  L E + AV+      S    PN+ T++ 
Sbjct: 318 IKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNT 377

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C +N    A ++   +   G  P+V TF  L+  LC +   + A+E+ ++M   G
Sbjct: 378 LIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKG 437

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P+  TY+ L++ LC   R++EA  +L  ++  G   +V  Y  ++DG CK  R  +A 
Sbjct: 438 CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ ++    GV+ + VT+NTL NG CK     +   L+  M      PDK +Y+T+L   
Sbjct: 498 DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYF 557

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G I+ A  I + M   G E D     +L+ GLC         ++ A ++   +  K 
Sbjct: 558 CQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGR-----VDVASKLLRSVQMKG 612

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC-GEGKIDKA 424
            V  P  Y  VI+ L K K+T EA+      +E G  P  IT+  V + LC G G I +A
Sbjct: 613 MVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEA 672

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           +     M E   +P   S+  L   L  L        L    +++G   Q +
Sbjct: 673 VDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSE 724



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 207/419 (49%), Gaps = 15/419 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E ++I   +       +   +N L+  L   N  E A +     +S G+ P+  
Sbjct: 349 KLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVC 408

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I+  C  ++   A ++ + M + G  P+  T++IL+ SLC   RLKEAL +L +M
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC  N+  YN L+ GLC   RV +A ++   ++  G+     TY  +++G CK  R 
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRV 528

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +L+++ I  G+ P+  T+ T+   +C++G   +   +++ M    C PD ++Y TL
Sbjct: 529 EEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTL 588

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL K G++  A  + + +   G  +  +  N +++ LC     ++   ++A ++F +M
Sbjct: 589 IGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALC-----KRKRTKEAMRLFREM 643

Query: 362 TKKVSVTDPGTYGIVIRTL-GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            +K    D  TY IV R L   G    EA+      +E G +P   +F  + + LC    
Sbjct: 644 MEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSM 703

Query: 421 IDKALLLLFLMYEHAKIP-SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQ 478
            D  + L+ ++ E  +   S TS   +I    +++K  DA A  GA     ++ ++KP+
Sbjct: 704 EDTLIQLINMVMEKGRFSQSETS---IIRGFLKIQKFNDALANLGA-----ILDRKKPR 754



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 198/413 (47%), Gaps = 7/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+ + ++  + I + + + G   +    N L+  L      E A++F  E    G  P+ 
Sbjct: 245 IEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEE--GFCPDQ 302

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+ ++   C      +  +++D M + G+  +V T+  L++ LCK G + EA+E+L  
Sbjct: 303 VTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHH 362

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M    C+PN  TYN L+  LC    VE A E+   + + G+ PDV T+ +++ G C    
Sbjct: 363 MVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSN 422

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              AMEL  E  E+G  P+  T++ L    C E    + + LLK M+   C  + + Y+T
Sbjct: 423 REIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNT 482

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL K  ++  A  IF +M   G        N+L+ GLC     +   +E+A Q+ ++
Sbjct: 483 LIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLC-----KSKRVEEAAQLMDQ 537

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +    D  TY  +++   +      A   + +    G  P  +T+  +I  LC  G+
Sbjct: 538 MIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGR 597

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +D A  LL  +     + +  +Y+ +I  L + +++ +A  L+   +++G  P
Sbjct: 598 VDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPP 650



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 173/376 (46%), Gaps = 17/376 (4%)

Query: 82  NWSV--SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           N+S   S F++LL  L      ++ +    +  S  +  +  TF I +  Y   +     
Sbjct: 87  NYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAE 146

Query: 140 RKVIDCMF-----DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
              I+ +F     D    P+   + + ++ L K+ +LK    +  +M      P++ T+N
Sbjct: 147 ---INPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFN 203

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L++ LC   ++  A  ML ++ N GL+PD  T+T +M GF +      A+ +    +E 
Sbjct: 204 ILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVES 263

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           G     V+ N L NG CKEG   + +    + ++    PD+++++ L+NGL + G I+  
Sbjct: 264 GCELTSVSVNVLVNGLCKEGRIEEALRF--IYEEEGFCPDQVTFNALVNGLCRTGHIKQG 321

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           + +   M+  GFE+D    NSL+ GLC K  E    +++A ++   M  +    +  TY 
Sbjct: 322 LEMMDFMLEKGFELDVYTYNSLISGLC-KLGE----IDEAVEILHHMVSRDCEPNTVTYN 376

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            +I TL K    + A          G +P   TFN++IQ LC     + A+ L   M E 
Sbjct: 377 TLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEK 436

Query: 435 AKIPSRTSYDMLITKL 450
              P   +Y +LI  L
Sbjct: 437 GCDPDEFTYSILIESL 452


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 197/408 (48%), Gaps = 7/408 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     +  DG    V  +N L+  L        A K F   +  GL P   T+  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG HPN   F+IL+ +  K G++ +A+ V  +M + G 
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P+  TY  ++  LC  GRVE+A      + ++ L P    Y +++   C   + ++A E
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E ++RG+  + + FN++ + +CKEG  ++   L  LM +    PD I+YSTL++G  
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A  +   MV  G + D    N+L+ G C  S      +EDA  +F +M     
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR-----MEDALVLFREMESSGV 580

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY I+++ L + ++T  A        E G      T+N ++  LC     D+AL 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 427 LLF-LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   L     ++ +RT ++++I  L ++ ++ +A  L+ A    G++P
Sbjct: 641 MFQNLCLTDLQLETRT-FNIMIGALLKVGRNDEAKDLFAALSANGLVP 687



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 206/430 (47%), Gaps = 18/430 (4%)

Query: 57  FVDRIKASPL-------KERIDIFDSIKKDGTNW----SVSDFNDLLMALVMLNEQETAV 105
            VD I  +P+       K   D  D + +  T      +V  +N LL  L   N  + A+
Sbjct: 123 IVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEAL 182

Query: 106 KFFSEASSYG--LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           +        G    P+  +++ +I  +  + D  +A      M D G  PNV T++ ++ 
Sbjct: 183 ELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIA 242

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK+  + +A+EVL  M + G  PN +TYN ++ G C  G+ +EA   L  + +DG++P
Sbjct: 243 ALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEP 302

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV TY ++MD  CK GR  EA ++ +   +RG+ P + T+ TL  GY  +G  ++  GLL
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            LM +    P+   +S L+    K GK+  A+ +F +M + G   D     +++  LC K
Sbjct: 363 DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC-K 421

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           S      +EDA + FE+M  +        Y  +I +L    K D+A   +   ++ G   
Sbjct: 422 SGR----VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            TI FN++I + C EG++ ++  L  LM      P   +Y  LI       K  +A  L 
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 464 GAALKQGVIP 473
            + +  G+ P
Sbjct: 538 ASMVSVGMKP 547



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 176/360 (48%), Gaps = 8/360 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARK-VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           G   ++  F+ M++  C      +A   V+  M   G  PNV ++ IL+  LC   R +E
Sbjct: 121 GFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQE 180

Query: 174 ALEVLDQMGRIG--CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
           ALE+L  M   G  C P++ +Y  ++ G    G +++AY     + + G+ P+V TY+++
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           +   CK    ++AME+L   ++ GV PN  T+N++ +GYC  G P + +G LK M     
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGV 300

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            PD ++Y++L++ L K G+   A  +F  M + G + +     +LL+G     +  K  L
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQG-----YATKGAL 355

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
            + + + + M +     +   + I+I    K  K D+A++      + G  P T+T+  V
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I  LC  G+++ A+     M +    P    Y+ LI  L   +K   A  L    L +G+
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 174/349 (49%), Gaps = 51/349 (14%)

Query: 153 PNVTTFTILVNSLCKSGRL-----------------------------------KEALE- 176
           PN+ T+ IL+ S C +GRL                                    +A++ 
Sbjct: 89  PNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDI 148

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDG 234
           VL +M ++GC PN+ +YN LLKGLC   R +EA E+L  + +DG    PDV +YT V++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           F K G  ++A    +E ++RG+ PNVVT++++    CK     K + +L  M K   +P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
             +Y+++++G    G+ + A+   K+M   G E D    NSL+  LC     +     +A
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC-----KNGRCTEA 323

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNN 410
            ++F+ MTK+    +  TYG    TL +G  T  AL+ +H  +++    G  P    F+ 
Sbjct: 324 RKMFDSMTKRGLKPEITTYG----TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           +I A   +GK+D+A+L+   M +    P   +Y  +I  L +  +  DA
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 171/383 (44%), Gaps = 40/383 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FDS+ K G    ++ +  LL                      G+ PN + FSI+I  Y 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    +A  V   M   G +P+  T+  ++  LCKSGR+++A+   +QM      P   
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGL------------------------------ 221
            YN L+  LC   + ++A E+++ + + G+                              
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 222 -----KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                KPD+ TY+ ++DG+C  G+ +EA +LL   +  G+ P+ VT+NTL NGYCK    
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
              + L + M+     PD I+Y+ +L GL +  +   A  ++  +   G +++    N +
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           L GLC     + +L ++A ++F+ +       +  T+ I+I  L K  + DEA       
Sbjct: 626 LHGLC-----KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680

Query: 397 IEMGHIPRTITFNNVIQALCGEG 419
              G +P   T++ + + L  +G
Sbjct: 681 SANGLVPDVRTYSLMAENLIEQG 703



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 148/343 (43%), Gaps = 47/343 (13%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK---PNIQTYN 194
           +AR V D +   G   ++      +  + +      A+   ++M R G     PN+ TY 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEAIE 253
            L+   C  GR++  +  L NV   G   D   +T ++ G C   R+++AM++ L    +
Sbjct: 96  ILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR--NCLPDKISYSTLLNGLLKWGKI 311
            G  PNV ++N L  G C +    + + LL++M     +C PD +SY+T++NG  K G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD- 214

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
                                                  L+ AY  + +M  +  + +  
Sbjct: 215 ---------------------------------------LDKAYGTYHEMLDRGILPNVV 235

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L K +  D+A+  L   ++ G +P   T+N+++   C  G+  +A+  L  M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +     P   +Y+ L+  L +  +  +A  ++ +  K+G+ P+
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 109/235 (46%)

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           K F      G+ P+  T+S +I  YC      EA K++  M   G  P+  T+  L+N  
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK  R+++AL +  +M   G  P+I TYN +L+GL    R   A E+ + +   G + ++
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            TY  ++ G CK   ++EA+ +        +     TFN +     K G   +   L   
Sbjct: 620 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 679

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           +     +PD  +YS +   L++ G +     +F  M   G   + RM+NS++R L
Sbjct: 680 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKL 734



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 122/260 (46%), Gaps = 7/260 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + + G    +  ++ L+    +  + + A K  +   S G+ P+  T++ +I  YC
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             +   +A  +   M  +G  P++ T+ I++  L ++ R   A E+   +   G +  + 
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN +L GLC     +EA  M  N+    L+ +  T+  ++    KVGR++EA +L    
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              G+ P+V T++ +     ++G   +   L   M++  C  +    ++++  LL+ G I
Sbjct: 681 SANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDI 740

Query: 312 RPAVSIFKEMVRFGFEVDER 331
             A +       + F +DE+
Sbjct: 741 TRAGT-------YLFMIDEK 753



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 119/262 (45%), Gaps = 8/262 (3%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + E   +  S+   G       +N L+     ++  E A+  F E  S G++P+  T
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+++          A+++   + ++G    ++T+ I+++ LCK+    EAL +   + 
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
               +   +T+N ++  L  VGR +EA ++   +  +GL PDV TY+ + +   + G   
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 706

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           E  +L     E G T N    N++     + G   +    L ++ +++    + S ++L 
Sbjct: 707 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKH-FSLEASTASLF 765

Query: 303 NGLLKWGKIRPAVSIFKEMVRF 324
             LL  GK       ++E  RF
Sbjct: 766 LDLLSGGK-------YQEYHRF 780



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/139 (20%), Positives = 62/139 (44%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S +++ + +F  ++  G +  +  +N +L  L        A + +   +  G      
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I++   C  N   EA ++   +          TF I++ +L K GR  EA ++   +
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680

Query: 182 GRIGCKPNIQTYNCLLKGL 200
              G  P+++TY+ + + L
Sbjct: 681 SANGLVPDVRTYSLMAENL 699


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 194/415 (46%), Gaps = 10/415 (2%)

Query: 15  TNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIF 73
           ++ R H+K   FN L     A  S    L +   P ++   R +  I K         + 
Sbjct: 36  SHNRFHSKSLNFNTL---DDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLS 92

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           + +   G    V   N L+ +   LN    A    ++    G  P++ TF+ +IR  C +
Sbjct: 93  NQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVE 152

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
               +A  + D M   G+ PNV T+  L+N LCK G    A+ +L  M +  C+P++  Y
Sbjct: 153 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 212

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
             ++  LC   +V EA+ +   +   G+ PD++TYT+++   C +        LLN+ I 
Sbjct: 213 TSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMIN 272

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
             + P+VV F+T+ +  CKEG   +   ++ +M  R   P+ ++Y+ L++G     ++  
Sbjct: 273 SKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDE 332

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           AV +F  MV  G+  +    N+L+ G C     +K     A  +FE+M +K  + +  TY
Sbjct: 333 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK-----ATYLFEEMCQKELIPNTVTY 387

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             ++     G+  D A+   H  +  G IP   T+  ++  LC +  +D+A+ LL
Sbjct: 388 NTLMHXCHVGRLQD-AIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALL 441



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 173/364 (47%), Gaps = 7/364 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  ++F  +   G +  +  +  L+ +L  L E +      ++  +  + P+  
Sbjct: 221 KDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVV 280

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            FS ++   C +    EA  V+D M   G  PNV T+  L++  C    + EA++V D M
Sbjct: 281 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN+ +YN L+ G C + R+++A  +   +    L P+  TY  +M   C VGR 
Sbjct: 341 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRL 399

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L +E +  G  P++ T+  L +  CK+    + + LLK ++  N  PD   Y+ +
Sbjct: 400 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 459

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G+ + G++  A  IF  +   G   + R    ++ GLC      + LL++A ++F +M
Sbjct: 460 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC-----RRGLLDEANKLFMEM 514

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  D  TY  + + L + K+   A+  L   +  G      T   +++ LC + K+
Sbjct: 515 DGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC-DDKL 573

Query: 422 DKAL 425
           D+++
Sbjct: 574 DQSV 577



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 160/326 (49%), Gaps = 15/326 (4%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P+   F  L+ S+ K+ +      + +QM   G  P++ T N L+   C++ R+  A+ +
Sbjct: 67  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +PD  T+T ++ G C  G+  +A+ L ++ I  G  PNVVT+ TL NG CK
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     + LL+ M++ NC PD + Y+++++ L K  ++  A ++F +MV  G   D   
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246

Query: 333 MNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             SL+  LC +  W+    L        +M     + D   +  V+  L K  K  EA  
Sbjct: 247 YTSLIHSLCNLCEWKHVTTL------LNQMINSKIMPDVVIFSTVVDALCKEGKITEA-- 298

Query: 392 HLHHAIEM----GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             H  ++M    G  P  +T+N ++   C + ++D+A+ +   M  +   P+  SY+ LI
Sbjct: 299 --HDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 356

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               ++++   A  L+    ++ +IP
Sbjct: 357 NGYCKIQRMDKATYLFEEMCQKELIP 382



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 90/205 (43%)

Query: 49  PRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFF 108
           P ++     +       L++ I +F  +   G    ++ +  LL  L   +  + A+   
Sbjct: 382 PNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALL 441

Query: 109 SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS 168
                  + P+   ++I+I   C   +   AR +   +   G  PNV T+TI++N LC+ 
Sbjct: 442 KTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRR 501

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G L EA ++  +M   GC P+  TYN + +GL        A ++L  +   G   DV T 
Sbjct: 502 GLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTT 561

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIE 253
           T +++  C         ++L+E ++
Sbjct: 562 TLLVEMLCDDKLDQSVKQILSEFVQ 586



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 7/233 (3%)

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A+   N  +     P+ V FN L     K         L   M      PD  + + L
Sbjct: 51  DDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNIL 110

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +N      ++  A S+  ++++ G + D     +L+RGLC++       + DA  +F+KM
Sbjct: 111 INSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK-----IGDALHLFDKM 165

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGK 420
             +    +  TYG +I  L K   T+ A I L  ++E G+  P  + + ++I +LC + +
Sbjct: 166 IGEGFQPNVVTYGTLINGLCKVGNTNAA-IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 224

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + +A  L   M      P   +Y  LI  L  L +      L    +   ++P
Sbjct: 225 VTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 277


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 201/418 (48%), Gaps = 19/418 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + ID FD + +    ++  D N ++   V +N  + A+  + +     +  N ++F+I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL---------- 175
           +I+C+C+ +    +      +   G+ P+V TF  L++ LC   R+ EAL          
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            + DQM  IG  P + T+N L+ GLC  GRV EA  ++  +   GL  DV TY  +++G 
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK+G +  A+ LL++  E  + P+VV ++ + +  CK+G       L   M ++   P+ 
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
            +Y+ +++G   +G+   A  + ++M+      D    N+L+      S +E  L E A 
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA----SVKEGKLFE-AE 381

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++ ++M  +    D  TY  +I    K  + D+A     H  ++   P  +TFN +I   
Sbjct: 382 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVY 437

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           C   ++D+ + LL  +     + + T+Y+ LI    +++    A  L+   +  GV P
Sbjct: 438 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 495



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 192/443 (43%), Gaps = 48/443 (10%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAV----------KFFSEASSYGLAPNSWT 122
           F  + K G    V  FN LL  L + +    A+            F +    GL P   T
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVIT 223

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           F+ +I   C +    EA  +++ M   G H +V T+  +VN +CK G  K AL +L +M 
Sbjct: 224 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 283

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
               KP++  Y+ ++  LC  G   +A  +   +   G+ P+V+TY  ++DGFC  GR +
Sbjct: 284 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 343

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +A  LL + IER + P+V+TFN L +   KEG   +   L   M  R   PD ++Y++++
Sbjct: 344 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 403

Query: 303 NGLLKWGKIRPAVSIF-------------------------------KEMVRFGFEVDER 331
            G  K  +   A  +F                               +E+ R G   +  
Sbjct: 404 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 463

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             N+L+ G C     E D L  A  +F++M       D  T  I++    + +K +EAL 
Sbjct: 464 TYNTLIHGFC-----EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL- 517

Query: 392 HLHHAIEMGHIP-RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            L   I+M  I   T+ +N +I  +C   K+D+A  L   +  H   P   +Y+++I+  
Sbjct: 518 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 577

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
                  DA  L+      G  P
Sbjct: 578 CGKSAISDANVLFHKMKDNGHEP 600



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 191/421 (45%), Gaps = 39/421 (9%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + + G    V  FN L+  L +      A    ++    GL  +  T+  ++   C
Sbjct: 208 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 267

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              D   A  ++  M +    P+V  ++ +++ LCK G   +A  +  +M   G  PN+ 
Sbjct: 268 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 327

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYNC++ G C  GR  +A  +L ++    + PDV T+ A++    K G+  EA +L +E 
Sbjct: 328 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 387

Query: 252 IERGV-------------------------------TPNVVTFNTLFNGYCKEGTPMKGV 280
           + R +                               +P+VVTFNT+ + YC+     +G+
Sbjct: 388 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 447

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            LL+ + +R  + +  +Y+TL++G  +   +  A  +F+EM+  G   D    N LL G 
Sbjct: 448 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 507

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     E + LE+A ++FE +       D   Y I+I  + KG K DEA          G
Sbjct: 508 C-----ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 562

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT---KLDQLEKSY 457
             P   T+N +I   CG+  I  A +L   M ++   P  ++Y+ LI    K  +++KS 
Sbjct: 563 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 622

Query: 458 D 458
           +
Sbjct: 623 E 623



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 164/329 (49%), Gaps = 9/329 (2%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
               A   FSE    G+APN +T++ MI  +C+   + +A++++  M +   +P+V TF 
Sbjct: 306 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 365

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L+++  K G+L EA ++ D+M      P+  TYN ++ G C   R ++A  M   + + 
Sbjct: 366 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS- 424

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
              PDV T+  ++D +C+  R +E M+LL E   RG+  N  T+NTL +G+C+       
Sbjct: 425 ---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 481

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             L + M      PD I+ + LL G  +  K+  A+ +F+ +     ++D    N ++ G
Sbjct: 482 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 541

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           +C  S      +++A+ +F  +       D  TY ++I          +A +  H   + 
Sbjct: 542 MCKGSK-----VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 596

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLL 428
           GH P   T+N +I+     G+IDK++ L+
Sbjct: 597 GHEPDNSTYNTLIRGCLKAGEIDKSIELI 625



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 158/354 (44%), Gaps = 10/354 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  + + G   +V  +N ++           A +   +     + P+  TF+ +I    
Sbjct: 313 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 372

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +   FEA K+ D M      P+  T+  ++   CK  R  +A  + D M      P++ 
Sbjct: 373 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVV 428

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+N ++   C   RV+E  ++L  +   GL  +  TY  ++ GFC+V   N A +L  E 
Sbjct: 429 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 488

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I  GV P+ +T N L  G+C+     + + L ++++      D ++Y+ +++G+ K  K+
Sbjct: 489 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 548

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +F  +   G E D +  N ++ G C KS      + DA  +F KM       D  
Sbjct: 549 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA-----ISDANVLFHKMKDNGHEPDNS 603

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           TY  +IR   K  + D+++  +      G      T   ++  L  +G++DK+ 
Sbjct: 604 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLDKSF 656



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 109/221 (49%), Gaps = 1/221 (0%)

Query: 43  LDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
            DL  +P  +     +D   +A  + E + +   I + G   + + +N L+     ++  
Sbjct: 419 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 478

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
             A   F E  S+G+ P++ T +I++  +C      EA ++ + +  +    +   + I+
Sbjct: 479 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 538

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ +CK  ++ EA ++   +   G +P++QTYN ++ G C    + +A  +   +K++G 
Sbjct: 539 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 598

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           +PD  TY  ++ G  K G  ++++EL++E    G + +  T
Sbjct: 599 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 639


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 219/482 (45%), Gaps = 34/482 (7%)

Query: 26  FNKLVVFAAASLSTAESLDLKEN-PRSLQAQRFVDR--IKASPLKERIDIFDSIKKDGTN 82
           F K   F    L TA+SL    N  ++ +  R + R   +   L E + +   ++  G +
Sbjct: 143 FEKFRHFMRLYLVTADSLIANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLS 202

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
            S    N +L   +     + A   F E S  G+ P+S +F +M+          EA + 
Sbjct: 203 PSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRW 262

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           +  M   G+ P+  T T+++++LC++G +  A+    +M  +G KPN+  +  L+ GLC 
Sbjct: 263 LSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 322

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV-TPNVV 261
            G +++A+EML  +  +G KP+VYT+TA++DG CK G + +A  L  + +   +  PNV 
Sbjct: 323 KGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVH 382

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+ ++  GYCKE    +   L   MK++   P+  +Y+TL+NG  K G    A  +   M
Sbjct: 383 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLM 442

Query: 322 VRFGFEVDERMMNSLLRGLCMKSW--EEKDLLEDAYQV---------------------- 357
              GF  +    N+++  LC KS   E  +LL  A+                        
Sbjct: 443 DDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDI 502

Query: 358 ------FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
                 F +M K     D     I+I    + KK  E+       + +G +P   T+ ++
Sbjct: 503 KQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSM 562

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I   C EG  D AL     M  H  +P   +Y  LI+ L +     +AC LY A + +G+
Sbjct: 563 ISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 622

Query: 472 IP 473
            P
Sbjct: 623 SP 624



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 181/408 (44%), Gaps = 10/408 (2%)

Query: 43  LDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
           +DL   P  +     +D + K   +K+  ++ + + ++G   +V     L+  L      
Sbjct: 302 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 361

Query: 102 ETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           E A + F +   S    PN  T++ MI  YC ++    A  +   M + G  PNV T+T 
Sbjct: 362 EKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 421

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+N  CK+G    A E+++ M   G +PNI TYN ++  LC   R  EAYE+L    + G
Sbjct: 422 LINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCG 481

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           L+ D  TYT ++   CK     +A+       + G   ++   N L   +C++    +  
Sbjct: 482 LEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 541

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            L +L+     +P K +Y+++++G  K G    A+  F  M R G   D     SL+ GL
Sbjct: 542 RLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGL 601

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C KS     ++++A +++E M  +       T   +     K   +  A+I L   ++  
Sbjct: 602 CKKS-----MVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVL-EPLDKK 655

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
              RT+    +++ LC E K+  A L    + E      R +     T
Sbjct: 656 LWIRTV--RTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTT 701


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 191/409 (46%), Gaps = 6/409 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ +  FD +  D  + +   FN L+ AL      E A+ F  + S     P  +T++ 
Sbjct: 236 LEDALAYFDELD-DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTS 294

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  +       EA   +    + G+ P+  T+T +++ LCK GR++E  E   +M   G
Sbjct: 295 LVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG 354

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +P+  TY  L+ G      + +A+ +   +   G      TY  ++DG CK GR  EA 
Sbjct: 355 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 414

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
                  ERG    VVT++ L +G+C EG     V L + M  R C P+ +SY+ ++ GL
Sbjct: 415 ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGL 474

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + GK+  A   F+++++     D    NS L GLC +     D + D  ++FE M  + 
Sbjct: 475 CRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQR----LDTVGDGVELFESMVSQG 530

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           +  +  +Y I++  + +    +  L   H  +  G  P  + FN +I+ LC  G++D+A 
Sbjct: 531 TSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEA- 589

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           L +F   E    P   SY  L+  L + E+  +A  L      QG  P+
Sbjct: 590 LEVFRELERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAPR 638



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 166/325 (51%), Gaps = 10/325 (3%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  FT+++N LC+  RL EA  VL++  R GC+P+  TYN  + GLC   RV++A+++
Sbjct: 39  PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 98

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +      P   TYTA++DG  K GR +EAM +L + +E+G +P + T+  + +G  K
Sbjct: 99  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSK 158

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR----FGFEV 328
            G   +   +   M    C PD   Y+ L++GL K GK+  A+    +MV      G E 
Sbjct: 159 AGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEP 218

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D  + N ++R LC         LEDA   F+++   + +T   T+  ++  L K ++T+E
Sbjct: 219 DVVIHNLVIRQLCASGN-----LEDALAYFDELDDSLDLTH-FTFNPLVAALCKAERTEE 272

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A+  +    E    P   T+ +++      G++D+ALL L    E   IP   +Y  +I 
Sbjct: 273 AIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIID 332

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L +L +  + C  +     +G  P
Sbjct: 333 GLCKLGRVEEGCERFHEMRNRGYEP 357



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/429 (23%), Positives = 188/429 (43%), Gaps = 38/429 (8%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   + +   + G       +N  +  L      + A +   +       P + T++ 
Sbjct: 57  LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++          EA  +++ M + G  P + T+T++++ L K+GR++EA  +   M   G
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 176

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAY----EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           C+P+   Y  L+ GL  +G+++EA     +M+ N    G++PDV  +  V+   C  G  
Sbjct: 177 CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNL 236

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+   +E ++  +     TFN L    CK     + +  +K M +R C P   +Y++L
Sbjct: 237 EDALAYFDE-LDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSL 295

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-------------------- 341
           ++G LK G++  A+   KE V  GF  D     S++ GLC                    
Sbjct: 296 VDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGY 355

Query: 342 ----------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
                     +  + +  ++  A++V+ +M +  +V    TY I++  L K  +  EA  
Sbjct: 356 EPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYA 415

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL- 450
                 E G +   +T++ ++   C EG +  A+ L   M +    P+  SY+++I  L 
Sbjct: 416 TFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLC 475

Query: 451 --DQLEKSY 457
              +L K+Y
Sbjct: 476 RAGKLAKAY 484



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 166/360 (46%), Gaps = 10/360 (2%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           +P+   F+++I   C +    EA  V++     G  P+  T+ + ++ LCK+ R+ +A +
Sbjct: 38  SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 97

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +L +M    C P   TY  L+ GL   GR++EA  +L  +   G  P + TYT V+DG  
Sbjct: 98  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLS 157

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL---- 292
           K GR  EA  +  + +  G  P+   +  L +G  K G   + +  L  M +  C     
Sbjct: 158 KAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVE 217

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD + ++ ++  L   G +  A++ F E+     ++     N L+  LC     + +  E
Sbjct: 218 PDVVIHNLVIRQLCASGNLEDALAYFDELDD-SLDLTHFTFNPLVAALC-----KAERTE 271

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +A    +KM+++       TY  ++    K  + DEAL+ L  A+E G IP  +T+ ++I
Sbjct: 272 EAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSII 331

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             LC  G++++       M      P   +Y  LI    + +    A  +Y   L+ G +
Sbjct: 332 DGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTV 391



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 143/303 (47%), Gaps = 2/303 (0%)

Query: 23  IPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGT 81
           +  F KL     A L   E+++    P ++     +D + K   ++E  + F  ++  G 
Sbjct: 296 VDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGY 355

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
                 +  L+   +       A + + +    G   ++ T++I++   C      EA  
Sbjct: 356 EPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYA 415

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
               M + G    V T++ L++  C  G +  A+E+  +M   GC+PN+ +YN +++GLC
Sbjct: 416 TFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLC 475

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC-KVGRSNEAMELLNEAIERGVTPNV 260
             G++ +AY     +    L PDVYT+ + + G C ++    + +EL    + +G +PN+
Sbjct: 476 RAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNL 535

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            +++ L +G C+ G     + +   M  R   PD + ++TL+  L   G++  A+ +F+E
Sbjct: 536 HSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE 595

Query: 321 MVR 323
           + R
Sbjct: 596 LER 598



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 125/275 (45%), Gaps = 42/275 (15%)

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNE--------------------------------A 251
           D    TA+++G CK G+ + AM LL+E                                A
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERA 67

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  G  P+ VT+N   +G CK         LLK M ++ CLP  ++Y+ L++GLLK G++
Sbjct: 68  VRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 127

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A++I ++MV  G     +    ++ GL      +   +E+A ++F  M       D  
Sbjct: 128 DEAMAILEQMVEKGNSPTLKTYTVVIDGL-----SKAGRVEEARRIFVDMLGNGCRPDAF 182

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHI----PRTITFNNVIQALCGEGKIDKALLL 427
            Y  +I  L K  K DEAL++L+  +E G      P  +  N VI+ LC  G ++ A L 
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDA-LA 241

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
            F   + +   +  +++ L+  L + E++ +A A 
Sbjct: 242 YFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAF 276



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 8/149 (5%)

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           VD R+  +LL GLC     ++ +L     + ++M       D   + +VI  L + K+ D
Sbjct: 7   VDTRVCTALLNGLCKTGQLDRAML-----LLDEMP---CSPDMVAFTVVINGLCREKRLD 58

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA   L  A+  G  P  +T+N  I  LC   ++D A  LL  M E   +P+  +Y  L+
Sbjct: 59  EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALV 118

Query: 448 TKLDQLEKSYDACALYGAALKQGVIPQRK 476
             L +  +  +A A+    +++G  P  K
Sbjct: 119 DGLLKAGRLDEAMAILEQMVEKGNSPTLK 147


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 206/433 (47%), Gaps = 26/433 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG-LAPNS 120
           KA  L +  ++   +++ G   +V  ++ ++      +  + A++ F   SS G   P+ 
Sbjct: 85  KAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDV 144

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+ +++  C+     EA  + + M   G  PNV +++ L++ LCK+GRL EA  + ++
Sbjct: 145 VTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEE 204

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M    C P++  Y   + GLC   RV EA +    +   G K D   ++ V+   CK G 
Sbjct: 205 MVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGH 264

Query: 241 SNEAME----------LLNEA-------IERGVTPNVVTFNTLFNGYCKEGTPMKGVGL- 282
           + EA            +L+EA       I R   P+   FNTL +  CK      GV L 
Sbjct: 265 AEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLF 324

Query: 283 --LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
             +K MK+  C P+  +Y+ +++ L K  ++  A  +  EM  +G   D    ++L+ GL
Sbjct: 325 QRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGL 384

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     +   L+ A  + E+M+K+    D  T   ++  L K  K D AL HL      G
Sbjct: 385 C-----KLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARG 439

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
             P  +T+N ++  LC  G+ID+A+  L  M      P   SY ++IT L +  ++  A 
Sbjct: 440 STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAH 499

Query: 461 ALYGAALKQGVIP 473
           A++   +K+GV+P
Sbjct: 500 AIFQEMVKRGVLP 512



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 191/391 (48%), Gaps = 27/391 (6%)

Query: 70  IDIFDSI-KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
           + +FD + ++ G   SV  +N  L AL   N  + A + F +    G  P+ +T+SI++R
Sbjct: 22  VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLR 81

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR-IGCK 187
             C   +  +A++++  + ++G   NV T++++++  CK+ R+ +ALE+   M    GC 
Sbjct: 82  GLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCV 141

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++ T+N LLKGLC   R+ EA+ +   +   G +P+V +Y+ ++DG CK GR +EA  L
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRL 201

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E +E+   P++V + +   G CK     +     + M  +    D +++ST++  L K
Sbjct: 202 WEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCK 261

Query: 308 WGK-----------------IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
            G                  +  A   F+EM+         + N+L+  +C     +   
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVC-----KSKR 316

Query: 351 LEDAYQVFEKMTKKVSVTDP---GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           L D   +F++M        P    TY I++  L K K+ DEA   ++     G  P  +T
Sbjct: 317 LPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
           ++ ++  LC  GK+D+A  LL  M +    P
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFP 407



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 171/335 (51%), Gaps = 14/335 (4%)

Query: 97  MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN---DFFEARKVIDCMFDNGYHP 153
           ML+E   A K F E  S    P++  F+ +I   C      D     + +  M +    P
Sbjct: 281 MLDE---ACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPP 337

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N+ T+ I+V++LCK+ +L EA E++++M   G  P++ TY+ L+ GLC +G+++ A ++L
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +  +G+ PD +T  ++++   K G+ + A+  L     RG TP++VT+NTL +G CK 
Sbjct: 398 EEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA 457

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   + +  L  M    C PD  SY+ ++  L + G+   A +IF+EMV+ G   D  + 
Sbjct: 458 GRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLY 517

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           +SLL GL     E+  L        E +   +   D   + +V+  L K  K ++A   +
Sbjct: 518 HSLLDGLARNGLEDLAL--------ELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVV 569

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
               + G      T+ +V+  L   GK+DKA  L+
Sbjct: 570 ERMADAGFPADAFTYISVVSGLRKLGKVDKARQLV 604



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 165/345 (47%), Gaps = 26/345 (7%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           GY  +V T+   +++L K+   + A E   QM R G  P+  TY+ +L+GLC  G +++A
Sbjct: 33  GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE-AIERGVTPNVVTFNTLFN 268
            E+L  ++  G+K +V TY+ V+DG CK  R ++A+E+    +   G  P+VVTFN+L  
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G C      +   L + M K  C P+ ISYSTLL+GL K G++  A  +++EMV      
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D     S + GLC     + + + +A     KM  K S  D   +  VI  L K    +E
Sbjct: 213 DLVAYTSFVTGLC-----KANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEE 267

Query: 389 A----LIHL-------------HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           A    + HL                I   H P    FN +I A+C   ++   +LL   M
Sbjct: 268 AQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRM 327

Query: 432 YEHAKI---PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               +    P+  +Y++++  L + ++  +A  L       G+ P
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP 372



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 132/253 (52%), Gaps = 3/253 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++  L    + + A +  +E ++YGL+P+  T+S ++   C       A  +++ M 
Sbjct: 342 YNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS 401

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+  T   ++N+L K+G++  AL  L+ M   G  P++ TYN LL GLC  GR++
Sbjct: 402 KEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRID 461

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA   L  +      PDV++YT ++   C+ G++  A  +  E ++RGV P+ V +++L 
Sbjct: 462 EAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLL 521

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G  + G        L+L+K   C PD + +  +L+GL K GK   A  + + M   GF 
Sbjct: 522 DGLARNGLEDLA---LELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFP 578

Query: 328 VDERMMNSLLRGL 340
            D     S++ GL
Sbjct: 579 ADAFTYISVVSGL 591



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 121/253 (47%), Gaps = 3/253 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E  ++ + +   G +  V  ++ L+  L  L + + A     E S  G+ P+S+
Sbjct: 351 KAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSF 410

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T + ++           A   ++ M   G  P++ T+  L++ LCK+GR+ EA+  L +M
Sbjct: 411 TDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKM 470

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C P++ +Y  ++  LC  G+   A+ +   +   G+ PD   Y +++DG  + G  
Sbjct: 471 VAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLE 530

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ELL  ++     P+ V    + +G CK G       +++ M       D  +Y ++
Sbjct: 531 DLALELLKTSL---CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISV 587

Query: 302 LNGLLKWGKIRPA 314
           ++GL K GK+  A
Sbjct: 588 VSGLRKLGKVDKA 600



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 3/192 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +   +   +++K  G+   +  +N LL  L      + A+ F ++  +    P+ +
Sbjct: 421 KAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF 480

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I+I   C       A  +   M   G  P+   +  L++ L ++G    ALE+L   
Sbjct: 481 SYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTS 540

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               CKP+   +  +L GLC  G+ E+A E++  + + G   D +TY +V+ G  K+G+ 
Sbjct: 541 L---CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKV 597

Query: 242 NEAMELLNEAIE 253
           ++A +L+++A E
Sbjct: 598 DKARQLVDDASE 609


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 206/445 (46%), Gaps = 30/445 (6%)

Query: 50  RSLQAQRFVD---RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN------- 99
           R L+ +R +    R  +  L + + +FD +       S+  FN LL A+  ++       
Sbjct: 11  RCLELERVIGSRARSGSLGLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTT 70

Query: 100 EQETAVKFFSE---ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
           E E  V  F+      +  + P+  T+SI+I C+C              +  +G+  N  
Sbjct: 71  ESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNI 130

Query: 157 TFTILVNSLCKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE---M 212
               L+  LC + RL+EA+++L  +M  +GC P++ +YN LLKG C   R EEA E   M
Sbjct: 131 VINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHM 190

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           + + +     P+V +Y  V++GF   G+ ++A  L  E ++RG+ PNVVT+ T+ +G CK
Sbjct: 191 MADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK 250

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                +  G+ + M  +   PD  +Y+ L++G L  GK +  V + +EM   G + D   
Sbjct: 251 AQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             SLL  LC           +A   F+ M +K    +   YGI+I     G  T  AL  
Sbjct: 311 YGSLLNYLC-----NNGRCREARFFFDSMIRKGIKPNVAIYGILIH----GYATKGALSE 361

Query: 393 LHH----AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           +H      +E G  P    FN +  A   +  ID+A+ +   M +    P   ++  LI 
Sbjct: 362 MHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALID 421

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L +L +  DA   +   + +GV P
Sbjct: 422 ALCKLGRVDDAVLKFNQMMNEGVAP 446



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 186/407 (45%), Gaps = 5/407 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE + + + +   G       +  LL  L        A  FF      G+ PN   + I+
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGIL 349

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I  Y  K    E   +++ M +NG  P+   F I+  +  K   + EA+ + ++M + G 
Sbjct: 350 IHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGL 409

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P++  +  L+  LC +GRV++A      + N+G+ P+++ + +++ G C V +  +A E
Sbjct: 410 SPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKE 469

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
              E + +G+ P+VV FNT+    C +G  MK   L+ LM++    PD ISY+TL+ G  
Sbjct: 470 FYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHC 529

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             G+I  A      M+  G + DE   N+LL G C         ++DAY VF +M +   
Sbjct: 530 LVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC-----RAGRIDDAYGVFREMLRNGI 584

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                TY  ++  L   ++  EA     + I  G       +N ++  L     +D+A  
Sbjct: 585 TPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFK 644

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L   +         T+++++I  L +  ++ DA  L+      G++P
Sbjct: 645 LFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 185/407 (45%), Gaps = 15/407 (3%)

Query: 63  ASPLKERIDIF-DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFF---SEASSYGLAP 118
           A  L+E +DI    + + G    V  +N LL         E A++     +++      P
Sbjct: 142 AKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N  +++ +I  +  +    +A  +   M D G  PNV T+T +++ LCK+  +  A  V 
Sbjct: 202 NVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            QM   G KP+  TYNCL+ G   +G+ +E   ML  +   GLKPD YTY ++++  C  
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           GR  EA    +  I +G+ PNV  +  L +GY  +G   +   LL LM +    PD   +
Sbjct: 322 GRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + +     K   I  A+ IF +M + G   D     +L+  LC     +  +L+    + 
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           E +   + V +   YG+   T+ K +K  E    +   +  G  P  + FN ++  LC +
Sbjct: 442 EGVAPNIFVFNSLVYGLC--TVDKWEKAKEFYFEM---LNQGIRPDVVFFNTILCNLCTK 496

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLI------TKLDQLEKSYDA 459
           G++ KA  L+ LM      P   SY  LI       ++D+  KS D 
Sbjct: 497 GQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDV 543



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 203/407 (49%), Gaps = 7/407 (1%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           F    K + + E + IF+ +K+ G +  V +F  L+ AL  L   + AV  F++  + G+
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGV 444

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           APN + F+ ++   C  + + +A++    M + G  P+V  F  ++ +LC  G++ +A  
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           ++D M R+G +P++ +Y  L+ G C VGR++EA + L  + + GLKPD +TY  ++ G+C
Sbjct: 505 LIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + GR ++A  +  E +  G+TP VVT++T+ +G        +   L   M       +  
Sbjct: 565 RAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIW 624

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
            Y+ +LNGL K   +  A  +F+ +    F+++    N ++ G   KS       EDA  
Sbjct: 625 IYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMI-GALFKSGRN----EDAMH 679

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE-MGHIPRTITFNNVIQAL 415
           +F  ++    V D  TY ++   L +    +E    L  A+E  G  P +   N +++ L
Sbjct: 680 LFATISSYGLVPDVFTYCLIAENLIEEGYLEE-FDDLFSAMEKSGTTPNSRMLNALVRRL 738

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
              G I +A   L  + E       ++  MLI+ L + E  + A +L
Sbjct: 739 LHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 203/443 (45%), Gaps = 59/443 (13%)

Query: 45  LKENPRSLQAQRFVDRIKASPLKERIDIFDS-IKKDGTNWSVSDFNDLLMALVMLNEQET 103
           L  N R  +A+ F D +    +K  + I+   I    T  ++S+ +DLL  +V       
Sbjct: 318 LCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMV------- 370

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
                      GL+P+   F+I+   Y  K    EA  + + M   G  P+V  F  L++
Sbjct: 371 ---------ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALID 421

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK GR+ +A+   +QM   G  PNI  +N L+ GLC V + E+A E    + N G++P
Sbjct: 422 ALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRP 481

Query: 224 DVY-----------------------------------TYTAVMDGFCKVGRSNEAMELL 248
           DV                                    +YT ++ G C VGR +EA + L
Sbjct: 482 DVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSL 541

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +  +  G+ P+  T+NTL +GYC+ G      G+ + M +    P  ++YST+L+GL   
Sbjct: 542 DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTT 601

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
            +   A  ++  M+  G + +  + N +L GL      + + +++A+++F+ +  K    
Sbjct: 602 RRFSEAKELYLNMITSGKQWNIWIYNIILNGL-----SKNNCVDEAFKLFQSLCSKDFQL 656

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAI-EMGHIPRTITFNNVIQALCGEGKIDKALLL 427
           +  T+ I+I  L K  + ++A+ HL   I   G +P   T+  + + L  EG +++   L
Sbjct: 657 EITTFNIMIGALFKSGRNEDAM-HLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDL 715

Query: 428 LFLMYEHAKIPSRTSYDMLITKL 450
              M +    P+    + L+ +L
Sbjct: 716 FSAMEKSGTTPNSRMLNALVRRL 738


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 213/439 (48%), Gaps = 40/439 (9%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I + + +++ G + ++  +N L+      ++   A+    +    G  P+  T S ++  
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC+     +A  ++D M + GY P+  TFT L++ L    +  EA+ ++D+M + GC+PN
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224

Query: 190 IQTYNCLLKGLCYVGRVEEAYEML-----------------------------------M 214
           + TY  ++ GLC  G ++ A+ +L                                    
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            ++N G++P+V TY++++   C   R ++A  LL++ IER + PNVVTFN L + + KEG
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
             ++   L   M KR+  PD  +YS+L+NG     ++  A  +F+ M+      +    N
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           +L+ G C     +   +++  ++F +M+++  V +  TY  +I    + +  D A +   
Sbjct: 405 TLINGFC-----KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
             +  G  P  +T+N ++  LC  GK++KA+++   +      P+  +Y+++I  + +  
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519

Query: 455 KSYDACALYGAALKQGVIP 473
           K  D   L+ +   +GV P
Sbjct: 520 KVEDGWDLFCSLSLKGVKP 538



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 197/408 (48%), Gaps = 5/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + + D + + G       F  L+  L + N+   AV         G  PN  T+ +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C + D   A  +++ M       NV  ++ +++SLCK     +AL +  +M   G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+ TY+ L+  LC   R  +A  +L ++    + P+V T+ A++D F K G+  EA 
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L +E I+R + P++ T+++L NG+C      +   + +LM  ++C P+ ++Y+TL+NG 
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  +I   V +F+EM + G   +     +L+ G     ++ +D  ++A  VF++M    
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF----FQARD-CDNAQMVFKQMVSDG 465

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY  ++  L K  K ++A++   +       P   T+N +I+ +C  GK++   
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L   +      P    Y+ +I+   +     +A AL+    + G +P
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 157/320 (49%), Gaps = 40/320 (12%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ ++ +L     ++ A+  F+E  + G+ PN  T+S +I C CN   + +A +++  M 
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +   +PNV TF  L+++  K G+L EA ++ D+M +    P+I TY+ L+ G C   R++
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG------------ 255
           EA  M   + +    P+V TY  +++GFCK  R +E +EL  E  +RG            
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442

Query: 256 -----------------------VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                                  V PN++T+NTL +G CK G   K + + + +++    
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P   +Y+ ++ G+ K GK+     +F  +   G + D  + N+++ G C      K L E
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC-----RKGLKE 557

Query: 353 DAYQVFEKMTKKVSVTDPGT 372
           +A  +F KM +   + D GT
Sbjct: 558 EADALFRKMREDGPLPDSGT 577



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 35/248 (14%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           N +V  FN L+ A V   +   A K + E     + P+ +T+S +I  +C  +   EA+ 
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE------------------------- 176
           + + M      PNV T+  L+N  CK+ R+ E +E                         
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446

Query: 177 ----------VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
                     V  QM   G  PNI TYN LL GLC  G++E+A  +   ++   ++P +Y
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY  +++G CK G+  +  +L      +GV P+V+ +NT+ +G+C++G   +   L + M
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566

Query: 287 KKRNCLPD 294
           ++   LPD
Sbjct: 567 REDGPLPD 574



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 151/314 (48%), Gaps = 6/314 (1%)

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           IL N L  S +L +A+ +   M +    P+I  +N LL  +  + + +    +   ++  
Sbjct: 56  ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G+  ++YTY  +++ FC+  + + A+ LL + ++ G  P++VT ++L NGYC        
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           V L+  M +    PD I+++TL++GL    K   AV++   MV+ G + +      ++ G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC +   + DL   A+ +  KM       +   Y  VI +L K +  D+AL         
Sbjct: 235 LCKRG--DIDL---AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P  IT++++I  LC   +   A  LL  M E    P+  +++ LI    +  K  +A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349

Query: 460 CALYGAALKQGVIP 473
             LY   +K+ + P
Sbjct: 350 EKLYDEMIKRSIDP 363



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 134/309 (43%), Gaps = 30/309 (9%)

Query: 188 PNIQTYNCLLKGLCYVGRV-----EEAYEMLMN-----------------VKNDGLKPDV 225
           P I   +  L G+CY GR       +  E+L N                 VK+  L P +
Sbjct: 27  PRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPL-PSI 85

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           + +  ++    K+ + +  + L  +    G++ N+ T+N L N +C+       + LL  
Sbjct: 86  FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 145

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M K    P  ++ S+LLNG     +I  AV++  +MV  G+  D     +L+ GL + + 
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PR 404
                  +A  + ++M ++    +  TYG+V+  L K    D A  +L + +E   I   
Sbjct: 206 A-----SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF-NLLNKMEAAKIEAN 259

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            + ++ VI +LC     D AL L   M      P+  +Y  LI+ L   E+  DA  L  
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319

Query: 465 AALKQGVIP 473
             +++ + P
Sbjct: 320 DMIERKINP 328


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 200/412 (48%), Gaps = 6/412 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE  DIFDS+   G   ++  ++ LL                +   S G+ PN   F+I
Sbjct: 278 IKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNI 337

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  Y       +A  + + M + G  P+  TF  +++SLC+ GRL +AL   + M  IG
Sbjct: 338 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 397

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGRSNEA 244
             P+   Y CL++G C  G + +A E++  + N D   P V  ++++++   K GR  E 
Sbjct: 398 VPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEG 457

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            ++++  ++ G  PNVVTFN+L  GYC  G   +   LL  M      P+   Y TL++G
Sbjct: 458 KDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 517

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             K G+I  A+++F++M+  G +    + N +L GL             A ++F +M + 
Sbjct: 518 YCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTA-----AKKMFHEMIES 572

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            +     TYG+V+  L +   TDEA + L     M      ITFN VI A+   G+  +A
Sbjct: 573 GTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEA 632

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
             L   +  +  +P+  +Y+++I+ L + E   +A  L+ +  K G  P  +
Sbjct: 633 KELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSR 684



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 186/402 (46%), Gaps = 4/402 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  + + G    V  +N L+       E + A + F +     ++P+  T++ +I   C
Sbjct: 144 VFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLC 203

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +  ++ +V++ M D G  PN  T+  L+     +G  KE++ V  +M   G  P + 
Sbjct: 204 KTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVV 263

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
             N  +  LC   R++EA ++  ++   G KP++ +Y+ ++ G+   G       L+N  
Sbjct: 264 NCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLM 323

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           + +G+ PN   FN L N Y + G   K + + + M+ +  +PD ++++T+++ L + G++
Sbjct: 324 VSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 383

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+  F  MV  G    E +   L++G C       +L++    + E M K +      
Sbjct: 384 DDALHKFNHMVDIGVPPSEAVYRCLIQGCC----NHGELVKAKELISEMMNKDIPPPGVK 439

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            +  +I  L K  +  E    +   ++ G  P  +TFN++++  C  G +++A  LL  M
Sbjct: 440 YFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 499

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                 P+   Y  L+    +  +  DA  ++   L +GV P
Sbjct: 500 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 541



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 195/469 (41%), Gaps = 66/469 (14%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  + +   +  V  +N L+  L    E   + +   +    G+ PN+ T++ +I  Y
Sbjct: 178 ELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGY 237

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
                + E+ +V   M  +G  P V      +++LC+  R+KEA ++ D M   G KPNI
Sbjct: 238 STAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNI 297

Query: 191 QTYNCLLKGL----CYV-------------------------------GRVEEAYEMLMN 215
            +Y+ LL G     C+                                G +++A  +  +
Sbjct: 298 ISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFED 357

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           ++N G+ PD  T+  V+   C++GR ++A+   N  ++ GV P+   +  L  G C  G 
Sbjct: 358 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGE 417

Query: 276 PMKGVGLLKLMKKRNCLPDKISY-STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
            +K   L+  M  ++  P  + Y S+++N L K G++     I   MV+ G   +    N
Sbjct: 418 LVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFN 477

Query: 335 SLLRGLCMKSWEEKDL------------------------------LEDAYQVFEKMTKK 364
           SL+ G C+    E+                                ++DA  VF  M  K
Sbjct: 478 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 537

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
                   Y I++  L + ++T  A    H  IE G      T+  V+  LC     D+A
Sbjct: 538 GVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEA 597

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +LL  ++         +++++I+ + ++ +  +A  L+ A    G++P
Sbjct: 598 NMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVP 646



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 152/327 (46%), Gaps = 5/327 (1%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           AP  +T++I+I CY   +    A  V   +   G  P+V ++  L++   K G + +A E
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +  +M      P++ TYN L+ GLC    + ++  +L  + + G++P+  TY +++ G+ 
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
             G   E++ +  E    G+ P VV  N+  +  C+     +   +   M  +   P+ I
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           SYSTLL+G    G      S+   MV  G   + R  N L+      ++    +++ A  
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILI-----NAYARCGMMDKAML 353

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +FE M  K  + D  T+  VI +L +  + D+AL   +H +++G  P    +  +IQ  C
Sbjct: 354 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCC 413

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSY 443
             G++ KA  L+  M      P    Y
Sbjct: 414 NHGELVKAKELISEMMNKDIPPPGVKY 440



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 142/295 (48%), Gaps = 5/295 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P + T+ IL++   +  R + AL V  ++ R G  P++ +YN L+ G    G V++AYE+
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +    + PDV TY +++DG CK     ++  +L + ++ G+ PN  T+N+L  GY  
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   + V + K M     +P  ++ ++ ++ L +  +I+ A  IF  MV  G + +   
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            ++LL G     +  +    +   +   M  K  V +   + I+I    +    D+A++ 
Sbjct: 300 YSTLLHG-----YAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLI 354

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                  G IP T+TF  VI +LC  G++D AL     M +    PS   Y  LI
Sbjct: 355 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLI 409



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/399 (22%), Positives = 166/399 (41%), Gaps = 43/399 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF+ ++  G       F  ++ +L  +   + A+  F+     G+ P+   +  +I+  C
Sbjct: 354 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCC 413

Query: 132 NKNDFFEARKVI------------------------------------DCMFDNGYHPNV 155
           N  +  +A+++I                                    D M   G  PNV
Sbjct: 414 NHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNV 473

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
            TF  L+   C  G ++EA  +LD M  IG +PN   Y  L+ G C  GR+++A  +  +
Sbjct: 474 VTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 533

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           + + G+KP    Y  ++ G  +  R+  A ++ +E IE G T ++ T+  +  G C+   
Sbjct: 534 MLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNC 593

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   LL+ +   N   D I+++ +++ +LK G+ + A  +F  +  +G        N 
Sbjct: 594 TDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNL 653

Query: 336 LLRGLCM-KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           ++  L   +S+EE D       +F  + K     D      ++R L K  +  +A  +L 
Sbjct: 654 MISNLIKEESYEEAD------NLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLS 707

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
              E        T + +      EGK  + + LL   Y+
Sbjct: 708 IIDENNLTLEASTISLLASLFSREGKCREHIKLLPAKYQ 746



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 112/253 (44%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  DI D + + G   +V  FN L+    ++   E A       +S G+ PN +
Sbjct: 450 KEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 509

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  ++  YC      +A  V   M   G  P    + I+++ L ++ R   A ++  +M
Sbjct: 510 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEM 569

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +IQTY  +L GLC     +EA  +L  +    +K D+ T+  V+    KVGR 
Sbjct: 570 IESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRR 629

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA EL       G+ P V T+N + +   KE +  +   L   ++K    PD    + +
Sbjct: 630 QEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHI 689

Query: 302 LNGLLKWGKIRPA 314
           +  LLK  ++  A
Sbjct: 690 VRMLLKKAEVAKA 702



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 94/218 (43%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + +F  +   G   +   +N +L  L        A K F E    G   +  T+ +
Sbjct: 524 IDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGV 583

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C  N   EA  +++ +F      ++ TF I+++++ K GR +EA E+   +   G
Sbjct: 584 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYG 643

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P + TYN ++  L      EEA  + ++V+  G  PD      ++    K     +A 
Sbjct: 644 LVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKAS 703

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
             L+   E  +T    T + L + + +EG   + + LL
Sbjct: 704 NYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLL 741



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 47/105 (44%)

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY I+I    +  + + AL      +  G  P   ++N +I     EG++DKA  L + M
Sbjct: 124 TYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKM 183

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            E +  P   +Y+ LI  L + ++   +  +    +  G+ P  K
Sbjct: 184 IEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNK 228


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 183/376 (48%), Gaps = 12/376 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E  D+   + +DG    V  +N ++  L   +  E A+  F+E    G  PN  
Sbjct: 405 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 464

Query: 122 TFSIMIR--CY-------CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
           + + +I   C        C +    EA +++  M D+G+ P+V T++ L++ LC   R+ 
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           +A  +L+ M +  CKP + T N L+ GLC  GR++EA E+L  + + G  PDV TY  ++
Sbjct: 525 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 584

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
            G C+ G++  A ELL++ + RG+ PNVVT+  L +G CK     +  G+   MK   C 
Sbjct: 585 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 644

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+  +Y+ L+ G    G++   + +F EMV  G   D  +  +L   LC KS      LE
Sbjct: 645 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC-KSGRSARALE 703

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
              +  E +  +    +   Y   +  L +  K + AL  +   +  G +P      +++
Sbjct: 704 ILREGRESLRSEAWGDE--VYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLV 761

Query: 413 QALCGEGKIDKALLLL 428
             LC  G+  +A  +L
Sbjct: 762 AGLCKSGQGGEARAVL 777



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 185/395 (46%), Gaps = 14/395 (3%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N +++ L   +  + AV+ F + +   ++P+SW++ I+I          +AR +   + 
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G  P+   +T L++ LC +    +A E+   M R GC P+  TYN ++   C  G +E
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA +++  +  DG  PDV TY  VMDG CK  R  EA+ L NE    G TPN  + NT+ 
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470

Query: 268 NGYCKE---------GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
            G C++         G   +   LLK M     +PD ++YSTL++GL    ++  A  + 
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 530

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           ++MV+   +      N+L+ GLC     +   +++A +V + M       D  TY  ++ 
Sbjct: 531 EDMVKRQCKPTVVTQNTLIHGLC-----KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 585

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
              +  +T+ A   L   +  G  P  +T+  ++  LC   ++ +A  +   M      P
Sbjct: 586 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 645

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +  +Y  LI       +      L+G  +  G+ P
Sbjct: 646 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 680



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 178/392 (45%), Gaps = 18/392 (4%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+ +L    E E   K        G  P+S+TF+ ++   C      EA  V+D M 
Sbjct: 47  YNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMR 106

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                P   T + L + LC  G ++ A ++L+ M       N   YN ++  LC   RV+
Sbjct: 107 SRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALCKAARVD 162

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A E+   +    +     +  +V+ G    GR +EA+++  E       P +VT N L 
Sbjct: 163 DALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLL 219

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF--KEMVRFG 325
            G+C  G   K   LL+ M    C PD++SY T+L+GL K G++  AV +F  +E+    
Sbjct: 220 EGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSS 279

Query: 326 FEVDE----RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
                    R  N ++ GLC     + D +++A Q+FEKM ++    D  +YGI+I  L 
Sbjct: 280 SSSSSPPSLRGYNIVILGLC-----QNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLA 334

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K  K ++A       +  G  P T+ + ++I  LC     D A  L   M      PS  
Sbjct: 335 KAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPV 394

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +Y+++I    +     +AC L    ++ G +P
Sbjct: 395 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVP 426



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 119/279 (42%), Gaps = 42/279 (15%)

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G+ P    +T+V+ G+C VGR+ EA+++ +  +E   +P    +N L +   K     
Sbjct: 3   QQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSKRQETE 61

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
               ++++M  R C PD  +++T+L GL K GK+  A  +  EM            + L 
Sbjct: 62  AVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLA 121

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL------- 390
             LC++       +E A+Q+ E M     V +   Y IV+  L K  + D+AL       
Sbjct: 122 HELCLRGS-----MERAFQLLEIM----PVANSSAYNIVVVALCKAARVDDALELARTMS 172

Query: 391 ---IHLHHA---------IEMGHI-------------PRTITFNNVIQALCGEGKIDKAL 425
              I L            ++ G I             P  +T N +++  C  G++DKA 
Sbjct: 173 EKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKAR 232

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            LL  M +    P   SY  ++  L +  +  +A  L+G
Sbjct: 233 ELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFG 271


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 201/416 (48%), Gaps = 27/416 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + +F  +K  G   + S  N LL+ L  + +  +A+K F E  +    P S 
Sbjct: 37  KGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSA 96

Query: 122 TFSIMIRCYCNKNDFFEARKVIDC---MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           + +I++R       FF A + I+    M  +G  P++ ++ IL+++L  SGR+ EA  + 
Sbjct: 97  SHNILLR------GFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALF 150

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
             M    C P+I TYN L+ G C +G+  EA  ++  +   G +P+V+TY+ +++ +CK+
Sbjct: 151 SAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKL 207

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
            +  EA E+  + IE    PN VTFNTL  G+CK G     + L   M+K  C    ++Y
Sbjct: 208 DKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTY 267

Query: 299 STLLNGLL-KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           +TL++ L  K G +  AV +F ++   G        NSL++G   ++        D  ++
Sbjct: 268 NTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERA-------NDGLRL 320

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
              M  +    D  TY  +I  L    + ++A    +    M   P   TFN +I+ LC 
Sbjct: 321 LCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFN---GMACAPNVTTFNFLIRGLCA 377

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + K+++A  +L    +    P  T+++ +I    +    +DA  +    LK G  P
Sbjct: 378 QKKVEEARNIL----DRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYP 429



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 188/392 (47%), Gaps = 44/392 (11%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           + + A++ F E  +   APN+ T++++IR +C      +A  V   M  +G  PN +T  
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 160 ILVNSLCKSGRLKEALEVLDQM----------------------GRI----------GCK 187
            L+  LC+ G++  AL++  +M                      GR           G +
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVE 124

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++++Y+ LL  L   GR+ EA+ +   +      PD+ TY  +MDG+CK+G++ EA  L
Sbjct: 125 PDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSL 181

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           + E ++ G  PNV T++ + N YCK     +   +   M + NC+P+ ++++TL+ G  K
Sbjct: 182 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK 241

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G +  A+ +F EM + G +      N+L+  LC K    +  +  A  +F K+      
Sbjct: 242 AGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKK----RGGVYTAVDLFNKLEGAGLT 297

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
               TY  +I+  G  ++ ++ L  L H    G  P  IT+N +I  LC   +++ A  L
Sbjct: 298 PTIVTYNSLIQ--GFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 355

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
              M   A  P+ T+++ LI  L   +K  +A
Sbjct: 356 FNGM---ACAPNVTTFNFLIRGLCAQKKVEEA 384



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 41/290 (14%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  +N L+     + +   A     E    G  PN +T+SI+I CYC  +   EA +V  
Sbjct: 159 IMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFM 218

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC--- 201
            M ++   PN  TF  L+   CK+G L++A+++  +M +IGCK  I TYN L+  LC   
Sbjct: 219 KMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR 278

Query: 202 -------------------------------YVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
                                          +  R  +   +L ++  +G KPDV TY  
Sbjct: 279 GGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLRLLCHMHAEGCKPDVITYNC 338

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++ G C   R  +A  L N        PNV TFN L  G C +    +   +L  M    
Sbjct: 339 LISGLCSANRVEDAQRLFNG---MACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTA-- 393

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
             PD  +++T++    K G +  A  + K+M++ GF  +     +L  G+
Sbjct: 394 --PDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 111/209 (53%), Gaps = 10/209 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM-LNEQETAVKFFSEASSYGLAPNS 120
           KA  L++ I +F  ++K G   ++  +N L+ +L        TAV  F++    GL P  
Sbjct: 241 KAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTI 300

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I+ +  + +  +  +++  M   G  P+V T+  L++ LC + R+++A  + + 
Sbjct: 301 VTYNSLIQGFSERAN--DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNG 358

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M    C PN+ T+N L++GLC   +VEEA     N+ +    PD+ T+  ++  FCK G 
Sbjct: 359 MA---CAPNVTTFNFLIRGLCAQKKVEEAR----NILDRMTAPDMTTFNTIILAFCKAGA 411

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            ++A E++ + ++ G  PN  T   L +G
Sbjct: 412 MHDAREVMKDMLKHGFYPNTYTTYALAHG 440



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 7/125 (5%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +  +G    V  +N L+  L   N  E A + F+       APN  TF+ +IR  C +  
Sbjct: 324 MHAEGCKPDVITYNCLISGLCSANRVEDAQRLFN---GMACAPNVTTFNFLIRGLCAQKK 380

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EAR ++D M      P++TTF  ++ + CK+G + +A EV+  M + G  PN  T   
Sbjct: 381 VEEARNILDRM----TAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYA 436

Query: 196 LLKGL 200
           L  G+
Sbjct: 437 LAHGI 441


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 207/437 (47%), Gaps = 45/437 (10%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R +   R  D IK   + + +D+F  + K     S+ +FN LL A+  +N+ E  +    
Sbjct: 51  REILRNRLSDIIK---VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGE 107

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           +  + G++ + +T+SI I C+C ++    A  V+  M   GY P++ T + L+N  C S 
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK 167

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           R+ +A+ ++DQM  +G KP+  T+  L+ GL    +  EA  ++  +   G +PD+ TY 
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227

Query: 230 AVMDGFCKVGRSNEAMELLN-----------------------------------EAIER 254
            V++G CK G  + A+ LLN                                   E   +
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           G+ PNVVT+N+L N  C  G       LL  M ++   P+ ++++ L++   K GK+  A
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
             + +EM++   + D    N L+ G CM      + L++A Q+F+ M  K  + +  TY 
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCM-----HNRLDEAKQMFKFMVSKDCLPNIQTYN 402

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            +I    K K+ ++ +       + G +  T+T+  +IQ     G  D A ++   M  +
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462

Query: 435 AKIPSRT-SYDMLITKL 450
            ++P+   +Y +L+  L
Sbjct: 463 -RVPTDIMTYSILLHGL 478



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 171/327 (52%), Gaps = 8/327 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN ++ +L      E AV  F+E  + G+ PN  T++ +I C CN   + +A +++  M 
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +   +PNV TF  L+++  K G+L EA ++ ++M +    P+  TYN L+ G C   R++
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA +M   + +    P++ TY  +++GFCK  R  + +EL  E  +RG+  N VT+ T+ 
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G+ + G       + K M       D ++YS LL+GL  +GK+  A+ IFK + +   E
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           ++  + N+++ G+C     +   + +A+ +F  ++ K  V    TY  +I  L   +   
Sbjct: 501 LNIFIYNTMIEGMC-----KAGKVGEAWDLFCSLSIKPDVV---TYNTMISGLCSKRLLQ 552

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQA 414
           EA        E G +P + T+N +I+A
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRA 579



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 192/414 (46%), Gaps = 37/414 (8%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + + D + + G       F  L+  L + N+   AV    +    G  P+  T+  
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C + D   A  +++ M       NV  F  +++SLCK   ++ A+++  +M   G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+ TYN L+  LC  GR  +A  +L N+    + P+V T+ A++D F K G+  EA 
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L  E I+R + P+ +T+N L NG+C      +   + K M  ++CLP+  +Y+TL+NG 
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++   V +F+EM + G   +     ++++G     ++  D  + A  VF++M    
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF----FQAGDC-DSAQMVFKQMVSNR 463

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHH----------------------AIEMGHI- 402
             TD  TY I++  L    K D AL+   +                      A ++G   
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523

Query: 403 ---------PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                    P  +T+N +I  LC +  + +A  L   M E   +P+  +Y+ LI
Sbjct: 524 DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 8/309 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D+F  ++  G   +V  +N L+  L        A +  S      + PN  TF+ +I  
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +  +    EA K+ + M      P+  T+ +L+N  C   RL EA ++   M    C PN
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           IQTYN L+ G C   RVE+  E+   +   GL  +  TYT ++ GF + G  + A  +  
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           + +   V  +++T++ L +G C  G     + + K ++K     +   Y+T++ G+ K G
Sbjct: 458 QMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG 517

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K+  A  +F        + D    N+++ GLC      K LL++A  +F KM +  ++ +
Sbjct: 518 KVGEAWDLF---CSLSIKPDVVTYNTMISGLC-----SKRLLQEADDLFRKMKEDGTLPN 569

Query: 370 PGTYGIVIR 378
            GTY  +IR
Sbjct: 570 SGTYNTLIR 578



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 148/321 (46%), Gaps = 40/321 (12%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  F  L++++ K  + +  + + +QM  +G   ++ TY+  +   C   ++  A  +
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +PD+ T +++++G+C   R ++A+ L+++ +E G  P+  TF TL +G   
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                + V L+  M +R C PD ++Y T++NGL K G I  A+++  +M     + +  +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N+++  LC     +   +E A  +F +M  K                            
Sbjct: 261 FNTIIDSLC-----KYRHVEVAVDLFTEMETK---------------------------- 287

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
                  G  P  +T+N++I  LC  G+   A  LL  M E    P+  +++ LI    +
Sbjct: 288 -------GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340

Query: 453 LEKSYDACALYGAALKQGVIP 473
             K  +A  L+   +++ + P
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDP 361



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 38/220 (17%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           ++  +N L+         E  V+ F E S  GL  N+ T++ +I+ +    D   A+ V 
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456

Query: 144 DCMFDNGYHPNVTTFTILVNSLC-----------------------------------KS 168
             M  N    ++ T++IL++ LC                                   K+
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G++ EA    D    +  KP++ TYN ++ GLC    ++EA ++   +K DG  P+  TY
Sbjct: 517 GKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
             ++    +      + EL+ E    G   +  T + + N
Sbjct: 574 NTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 182/377 (48%), Gaps = 7/377 (1%)

Query: 85  VSDFNDLLMALVMLN--EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
           V    +LL  +V L   E E +  F+ E    G  PN + F++++  +C       AR V
Sbjct: 105 VQGCENLLRRVVRLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLV 164

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
            D +   G  P V +F  L++  CK+G ++E   +   M      P++ T++ L+ GLC 
Sbjct: 165 FDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCK 224

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            GR++E   +   +   GL P+  T+T ++DG CK G+ + A++     + +GV P++VT
Sbjct: 225 EGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVT 284

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           +N L NG CK G   +   L+  M      PD+I+++TL++G  K+G +  A+ I + MV
Sbjct: 285 YNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMV 344

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
             G E+D+     L+ GLC         + DA ++   M       D  TY +V+    K
Sbjct: 345 EEGIELDDVAFTVLISGLCRDGR-----VHDAERMLRDMLSAGFKPDDPTYTMVVDCFCK 399

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
                     L      GH+P  +T+N ++  LC +G++  A +LL  M      P+  +
Sbjct: 400 KGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDIT 459

Query: 443 YDMLITKLDQLEKSYDA 459
           Y++L+    +   S D 
Sbjct: 460 YNILLEGHSKHGSSVDV 476



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 185/402 (46%), Gaps = 8/402 (1%)

Query: 56  RFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           R V R++   L+     +  +   G   +   FN L+     +    +A   F E    G
Sbjct: 113 RRVVRLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRG 172

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           L P   +F+ +I   C      E  ++   M      P+V TF+ L+N LCK GRL E  
Sbjct: 173 LRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGS 232

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            + D+M   G  PN  T+  L+ G C  G+V+ A +    +   G++PD+ TY A+++G 
Sbjct: 233 LLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGL 292

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CKVG   EA  L+NE    G+ P+ +TF TL +G CK G     + + + M +     D 
Sbjct: 293 CKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDD 352

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           ++++ L++GL + G++  A  + ++M+  GF+ D+     ++   C     +K  +   +
Sbjct: 353 VAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFC-----KKGNVXMGF 407

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++ ++M     V    TY  ++  L K  +   A + L   + +G  P  IT+N +++  
Sbjct: 408 KLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLE-- 465

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
            G  K   ++ +     E   +    SY  L+ +  +  K +
Sbjct: 466 -GHSKHGSSVDVDIFNSEKGLVKDYASYTALVNESSKTSKDH 506



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 123/268 (45%), Gaps = 5/268 (1%)

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +E ++   + V + G  P+ + +  +M GFCKVG    A  + +E  +RG+ P VV+FNT
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G CK G   +G  L  +M+     PD  ++S L+NGL K G++     +F EM   G
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              +      L+ G C     + DL   A + F+ M  +    D  TY  +I  L K   
Sbjct: 243 LVPNGVTFTVLIDGQCKGG--KVDL---ALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 297

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             EA   ++     G  P  ITF  +I   C  G ++ AL +   M E        ++ +
Sbjct: 298 LKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTV 357

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           LI+ L +  + +DA  +    L  G  P
Sbjct: 358 LISGLCRDGRVHDAERMLRDMLSAGFKP 385



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 5/183 (2%)

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+   ++ L++G  K G +  A  +F E+ + G        N+L+ G C     +   +E
Sbjct: 140 PNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCC-----KAGAVE 194

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           + +++   M  +    D  T+  +I  L K  + DE  +        G +P  +TF  +I
Sbjct: 195 EGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLI 254

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
              C  GK+D AL    +M      P   +Y+ LI  L ++    +A  L       G+ 
Sbjct: 255 DGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLR 314

Query: 473 PQR 475
           P R
Sbjct: 315 PDR 317


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 194/397 (48%), Gaps = 6/397 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A   ++   + +  ++ G   SV  +N +L  L    + + A+K F E     + PN  T
Sbjct: 353 AGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLST 411

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++IMI   C       A  V D M D G  PNV T  I+V+ LCK+ RL +A  + + + 
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              C+P+  TY  L++GL   GRV+EAY++   + +    P+   YT+++  F K GR  
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKE 531

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +  ++ NE +  G +P+++  NT  +   K G   KG  L + +K    +PD  SY+ L+
Sbjct: 532 DGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILI 591

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +GL+K G    A  +F  M   G  +D R  N+++ G C      K     AYQ+ E+M 
Sbjct: 592 HGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNK-----AYQLLEEMK 646

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            K       TYG VI  L K  + DEA +    A   G     + ++++I      G+ID
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRID 706

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           +A L++  + +    P+  +++ L+  L + E+  +A
Sbjct: 707 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 192/402 (47%), Gaps = 5/402 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+  + + D++K  G   +V   N ++  L      + A   F         P++ 
Sbjct: 421 KAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAV 480

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I          EA K+ + M D    PN   +T L+ +  K GR ++  ++ ++M
Sbjct: 481 TYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEM 540

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R+GC P++   N  +  +   G +E+   +   +KN G  PD  +YT ++ G  K G +
Sbjct: 541 LRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFA 600

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA EL     E+G   +   +NT+ +G+CK G   K   LL+ MK +   P  ++Y ++
Sbjct: 601 HEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSV 660

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K  ++  A  +F+E    G E++  + +SL+ G     + +   +++AY + E++
Sbjct: 661 IDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG-----FGKVGRIDEAYLIMEEL 715

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K    +  T+  ++  L K ++  EAL+      ++   P  IT++ +I  LC   K 
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +KA +    M +    P+  +Y  +I+ L +     +A  L+
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLF 817



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 184/365 (50%), Gaps = 5/365 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I++ + + G +  +   N  +  +    E E     F E  + G  P++ +++I+I    
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA ++   M + G   +   +  +++  CKSG++ +A ++L++M   G +P + 
Sbjct: 596 KAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  ++ GL  + R++EAY +    K+ G++ +V  Y++++DGF KVGR +EA  ++ E 
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+TPNV T+N L +   K     + +   + MK   C P+ I+YS L++GL K  K 
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A   ++EM + GF+ +     +++ GL     +  +++E A  +FEK  +K  V D  
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLA----KAGNIVE-ADTLFEKFKEKGGVADSA 830

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            Y  +I  L    +  +A      A   G    T T   ++ +L     I++A ++  ++
Sbjct: 831 IYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVL 890

Query: 432 YEHAK 436
            E AK
Sbjct: 891 RETAK 895



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 174/371 (46%), Gaps = 9/371 (2%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E L L  +P  L    ++D + KA  +++   +F  IK  G       +  L+  LV   
Sbjct: 539 EMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAG 598

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
               A + F      G   ++  ++ +I  +C      +A ++++ M   G+ P V T+ 
Sbjct: 599 FAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            +++ L K  RL EA  + ++    G + N+  Y+ L+ G   VGR++EAY ++  +   
Sbjct: 659 SVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 718

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           GL P+VYT+  ++D   K    +EA+       +   TPN +T++ L +G CK     K 
Sbjct: 719 GLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKA 778

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
               + M+K+   P+  +Y+T+++GL K G I  A ++F++    G   D  + N+++ G
Sbjct: 779 FVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEG 838

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI---HLHHA 396
           L        +   DAY++FE+   K       T  +++ +L K +  ++A I    L   
Sbjct: 839 L-----SNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRET 893

Query: 397 IEMGHIPRTIT 407
            +  H  R+ T
Sbjct: 894 AKAQHAARSWT 904



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 154/337 (45%), Gaps = 13/337 (3%)

Query: 144 DCMF-------DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
           DCM        + GY  NV  FT L+    + GR+  AL +LD+M     +P++  YN  
Sbjct: 217 DCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVC 276

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           +      G+V+ A++    +K +GL  D  TYT+++   CK  R NEA+EL     +   
Sbjct: 277 IDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQ 336

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            P    +NT+  GY   G       LL+  +++ C+P  +SY+ +L+ L + G++  A+ 
Sbjct: 337 VPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALK 396

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
            F+EM +     +    N ++  LC     +   LE A  V + M       +  T  I+
Sbjct: 397 KFEEMKKDAIP-NLSTYNIMIDMLC-----KAGKLETALVVRDAMKDAGLFPNVITVNIM 450

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +  L K ++ D+A             P  +T+ ++I+ L   G++D+A  L   M +  +
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           IP+   Y  LI    +  +  D   +Y   L+ G  P
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 99/447 (22%), Positives = 192/447 (42%), Gaps = 41/447 (9%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK+  L+E      +++K     + S + +L+ AL    + +  +  F +    G A N 
Sbjct: 176 IKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNV 235

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             F+ +IR +  +     A  ++D M  N   P+V  + + ++   K+G++  A +   +
Sbjct: 236 HLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHE 295

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G   +  TY  ++  LC   R+ EA E+  ++  +   P  Y Y  ++ G+   G+
Sbjct: 296 MKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGK 355

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  LL     +G  P+VV++N + +   ++G   + +   + MKK + +P+  +Y+ 
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK-DAIPNLSTYNI 414

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++ L K GK+  A+ +   M   G   +   +N ++  LC     +   L+DA  +FE 
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLC-----KAQRLDDACSIFEG 469

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL--CGE 418
           +  K    D  TY  +I  LG+  + DEA       ++   IP  + + ++I+    CG 
Sbjct: 470 LDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGR 529

Query: 419 ---------------------------------GKIDKALLLLFLMYEHAKIPSRTSYDM 445
                                            G+I+K   L   +     IP   SY +
Sbjct: 530 KEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTI 589

Query: 446 LITKLDQLEKSYDACALYGAALKQGVI 472
           LI  L +   +++A  L+    +QG +
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCV 616



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 167/386 (43%), Gaps = 6/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N LLM +    +     +   E S  G  P++ T   ++  +       EA   I  M 
Sbjct: 133 YNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMR 192

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
              + P  + +T L+ +L  S      L +  QM  +G   N+  +  L++     GRV+
Sbjct: 193 KLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVD 252

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A  +L  +K++ L+PDV  Y   +D F K G+ + A +  +E    G+  + VT+ ++ 
Sbjct: 253 AALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMI 312

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              CK     + V L + M +   +P   +Y+T++ G    GK   A S+ +   R G  
Sbjct: 313 GVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCI 372

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N +L  L       K  +++A + FE+M KK ++ +  TY I+I  L K  K +
Sbjct: 373 PSVVSYNCILSCL-----GRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLE 426

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            AL+      + G  P  IT N ++  LC   ++D A  +   +      P   +Y  LI
Sbjct: 427 TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L +  +  +A  LY   L    IP
Sbjct: 487 EGLGRHGRVDEAYKLYEQMLDANQIP 512


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 197/407 (48%), Gaps = 22/407 (5%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +  + LK   ++  ++   G    VS FN L+ AL   ++   A+    E SSYGL P+ 
Sbjct: 169 VDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDE 228

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+ +++ +  + +   A +V + M D G      T  +LV+  CK GR++EAL  +D+
Sbjct: 229 KTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDE 288

Query: 181 MGR----------------IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           M                   GC+P+  TYN L+  LCY G+++EA  +L  ++  G   +
Sbjct: 289 MSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARN 348

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V TY  ++DGFCK  +  EA E+ ++   +G++ N VT+NTL +G CK     +   L+ 
Sbjct: 349 VITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMD 408

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            M      PDK +Y+++L    + G I+ A  I + M   G E D     +L+ GLC   
Sbjct: 409 QMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLC--- 465

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
             +   +E A ++   +  K  V  P  Y  VI+ L K K+T EA+       E G+ P 
Sbjct: 466 --KAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPD 523

Query: 405 TITFNNVIQALCGE-GKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             T+  V + L    G I +A+  +  M E   +P  +S+ ML   L
Sbjct: 524 AFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGL 570



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 174/379 (45%), Gaps = 21/379 (5%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N LL  LV  N+ +      S   S G+ P+  TF+I+I+  C  +    A  V++ M 
Sbjct: 161 YNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMS 220

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+  TFT L+    + G +  A  V +QM   GC     T N L+ G C  GR+E
Sbjct: 221 SYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIE 280

Query: 208 EAY----------------EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           EA                 E+   +KN G +PD +TY  ++D  C  G+  EA+ LL E 
Sbjct: 281 EALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREM 340

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              G   NV+T+NTL +G+CK     +   +   M+ +    + ++Y+TL++GL K  ++
Sbjct: 341 EISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRV 400

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           + A  +  +M+  G + D+   NS+L   C     E D ++ A  + + MT      D  
Sbjct: 401 QEAAQLMDQMIMEGLKPDKFTYNSMLTYFC----REGD-IQKAADIVQTMTSNGCEPDIV 455

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TYG +I  L K  + + A   L      G +     +N VIQAL    +  +A+ L   M
Sbjct: 456 TYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREM 515

Query: 432 YEHAKIPSRTSYDMLITKL 450
            E    P   +Y ++   L
Sbjct: 516 EEKGNTPDAFTYKIVFRGL 534



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 181/376 (48%), Gaps = 21/376 (5%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           +GLA ++  ++ ++    + N       V   M   G  P+V+TF IL+ +LCK+ +++ 
Sbjct: 152 FGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRP 211

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A+ V+++M   G  P+ +T+  L++G    G ++ A+ +   + + G      T   ++ 
Sbjct: 212 AILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVH 271

Query: 234 GFCKVGR-----------SNE-----AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           GFCK GR           SNE     A+EL NE   +G  P+  T+N L +  C  G   
Sbjct: 272 GFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQ 331

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           + +GLL+ M+   C  + I+Y+TL++G  K  KI  A  IF +M   G   +    N+L+
Sbjct: 332 EALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLI 391

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            GLC KS      +++A Q+ ++M  +    D  TY  ++    +     +A   +    
Sbjct: 392 DGLC-KSRR----VQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMT 446

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             G  P  +T+  +I  LC  G+++ A  LL  +     + +  +Y+ +I  L + +++ 
Sbjct: 447 SNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTK 506

Query: 458 DACALYGAALKQGVIP 473
           +A  L+    ++G  P
Sbjct: 507 EAMRLFREMEEKGNTP 522



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 134/279 (48%), Gaps = 1/279 (0%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I++++ +K  G       +N L+ +L    + + A+    E    G A N  T++ +I  
Sbjct: 299 IELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDG 358

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C      EA ++ D M   G   N  T+  L++ LCKS R++EA +++DQM   G KP+
Sbjct: 359 FCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPD 418

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN +L   C  G +++A +++  + ++G +PD+ TY  ++ G CK GR   A  LL 
Sbjct: 419 KFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLR 478

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL-KW 308
               +G+      +N +     K     + + L + M+++   PD  +Y  +  GL    
Sbjct: 479 SIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSG 538

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           G I  AV    EM+  GF  +      L  GLC  S E+
Sbjct: 539 GPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMED 577



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 162/393 (41%), Gaps = 38/393 (9%)

Query: 91  LLMALVMLNEQETAVKFFSEASSY-GLAPNSWTFSIMIR------CYCNKNDFFEARKVI 143
           LL  L   N++  A++  S AS      PNS  +  ++R       + +  D  +  K +
Sbjct: 57  LLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGL 116

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG-RIGCKPNIQTYNCLLKGLCY 202
           DC  D G         I ++S  K    +E L +++ M    G   +   YN LL  L  
Sbjct: 117 DCQIDRG------VLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVD 170

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
             +++    +   + + G+KPDV T+  ++   CK  +   A+ ++ E    G+ P+  T
Sbjct: 171 GNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKT 230

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           F TL  G+ +EG       + + M    C    ++ + L++G  K G+I  A+S   EM 
Sbjct: 231 FTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEM- 289

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
                                S E K  +  A +++ +M  K    D  TY ++I +L  
Sbjct: 290 ---------------------SNEGKHTM--AIELYNEMKNKGCQPDEFTYNMLIDSLCY 326

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
             K  EAL  L      G     IT+N +I   C   KI++A  +   M       +  +
Sbjct: 327 RGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVT 386

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           Y+ LI  L +  +  +A  L    + +G+ P +
Sbjct: 387 YNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDK 419


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 196/407 (48%), Gaps = 7/407 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F ++   G    V  FN L+       E E A++F+ E     + P+  +FS +I  +
Sbjct: 250 EVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLF 309

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             + +   A + +  M + G  P+   +T+++   C++G + EAL V D+M   GC P++
Sbjct: 310 TRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDV 369

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN LL GLC   R+ +A E+L  +K  G+ PD+ T+T ++ G+C+ G   +A++  + 
Sbjct: 370 VTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDT 429

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             ++ + P++VT+NTL +G C++G   K   L   M  R   P+ ++YS L++   + G+
Sbjct: 430 ISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQ 489

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A +   EMV  G   +    NS+++G C      K       Q   KM     + D 
Sbjct: 490 VDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSK-----GQQFLPKMRHDKVMPDL 544

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLF 429
            TY  +I    K  K  EA  +L   +E  ++ P  +T+N +I      G + +A  +  
Sbjct: 545 ITYNTLIHGYVKEGKMHEAF-NLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYK 603

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            M      P R +Y  +I        S  +  L+   L++G+ P  K
Sbjct: 604 KMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDDK 650



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 199/419 (47%), Gaps = 11/419 (2%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           R +A  ++  + + DS+   G    +  +N +L  L+     + A + F    + G+AP+
Sbjct: 204 RFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPD 263

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             +F+++I  +C   +  EA +    M      P+V +F+ L+    + G +  A E L 
Sbjct: 264 VRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLR 323

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M   G  P+   Y  ++ G C  G + EA  +   +   G  PDV TY  +++G CK  
Sbjct: 324 EMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKER 383

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R ++A ELLNE  ERGV P++ TF TL +GYC++G   K +     +  +   PD ++Y+
Sbjct: 384 RLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYN 443

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL++G+ + G +  A  ++ +M        E   N +   + + S  EK  +++A+   +
Sbjct: 444 TLIDGMCRQGDLGKANELWDDM-----HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLD 498

Query: 360 KMTKKVSVTDPGTYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +M  K  V +  TY  +I+     G   K  + L  + H   M   P  IT+N +I    
Sbjct: 499 EMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVM---PDLITYNTLIHGYV 555

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            EGK+ +A  LL +M      P   +Y+M+I+         +A  +Y     +G+ P R
Sbjct: 556 KEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDR 614



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 187/392 (47%), Gaps = 11/392 (2%)

Query: 88  FNDLLMALVMLNEQ------ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           F D++   VM++ +      E A+       S G+ P   T++ +++       + +AR+
Sbjct: 191 FPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKARE 250

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V   M   G  P+V +F +L+   C++G L+EAL    +M      P++ +++CL+    
Sbjct: 251 VFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFT 310

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G ++ A E L  ++  GL PD   YT V+ GFC+ G   EA+ + +E +  G  P+VV
Sbjct: 311 RRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVV 370

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+NTL NG CKE        LL  MK+R   PD  +++TL++G  + G I  A+  F  +
Sbjct: 371 TYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTI 430

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
                  D    N+L+ G+C      +  L  A ++++ M  +    +  TY I+I +  
Sbjct: 431 SDQRLRPDIVTYNTLIDGMC-----RQGDLGKANELWDDMHSREIFPNHVTYSILIDSHC 485

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           +  + D A   L   +  G +P  +T+N++I+  C  G + K    L  M     +P   
Sbjct: 486 EKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLI 545

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +Y+ LI    +  K ++A  L      + V P
Sbjct: 546 TYNTLIHGYVKEGKMHEAFNLLKIMENENVQP 577



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 177/355 (49%), Gaps = 5/355 (1%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N++T +IM+  YC    F E   VI  M      P+V T  ++V++  ++G ++ A+ ++
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D M   G KP + TYN +LKGL   GR ++A E+   +   G+ PDV ++  ++ GFC+ 
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G   EA+    E   R VTP+VV+F+ L   + + G        L+ M++   +PD + Y
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + ++ G  + G +  A+ +  EMV FG   D    N+LL GLC     ++  L DA ++ 
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLC-----KERRLSDAEELL 392

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            +M ++    D  T+  +I    +    ++AL       +    P  +T+N +I  +C +
Sbjct: 393 NEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQ 452

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G + KA  L   M+     P+  +Y +LI    +  +  +A A     + +G++P
Sbjct: 453 GDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVP 507



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 155/303 (51%), Gaps = 5/303 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E + + D +   G    V  +N LL  L        A +  +E    G+ P+  
Sbjct: 346 RAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLC 405

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  YC   +  +A +  D + D    P++ T+  L++ +C+ G L +A E+ D M
Sbjct: 406 TFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM 465

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 PN  TY+ L+   C  G+V+ A+  L  + N G+ P++ TY +++ G+C+ G  
Sbjct: 466 HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNV 525

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++  + L +     V P+++T+NTL +GY KEG   +   LLK+M+  N  PD ++Y+ +
Sbjct: 526 SKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMI 585

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G    G ++ A  ++K+M   G E D     S++ G  +    +K     ++Q+ ++M
Sbjct: 586 ISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKK-----SFQLHDEM 640

Query: 362 TKK 364
            +K
Sbjct: 641 LQK 643



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 137/270 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L +  ++ + +K+ G    +  F  L+         E A++FF   S   L P+  
Sbjct: 381 KERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIV 440

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C + D  +A ++ D M      PN  T++IL++S C+ G++  A   LD+M
Sbjct: 441 TYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PNI TYN ++KG C  G V +  + L  +++D + PD+ TY  ++ G+ K G+ 
Sbjct: 501 VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKM 560

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA  LL       V P+ VT+N + +G+   G   +   + K M  R   PD+ +Y ++
Sbjct: 561 HEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSM 620

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           +NG +  G  + +  +  EM++ G   D++
Sbjct: 621 INGHVVAGNSKKSFQLHDEMLQKGLAPDDK 650


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 194/397 (48%), Gaps = 6/397 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A   ++   + +  ++ G   SV  +N +L  L    + + A+K F E     + PN  T
Sbjct: 353 AGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLST 411

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++IMI   C       A  V D M D G  PNV T  I+V+ LCK+ RL +A  + + + 
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              C+P+  TY  L++GL   GRV+EAY++   + +    P+   YT+++  F K GR  
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKE 531

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +  ++ NE +  G +P+++  NT  +   K G   KG  L + +K    +PD  SY+ L+
Sbjct: 532 DGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILI 591

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +GL+K G    A  +F  M   G  +D R  N+++ G C      K     AYQ+ E+M 
Sbjct: 592 HGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNK-----AYQLLEEMK 646

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            K       TYG VI  L K  + DEA +    A   G     + ++++I      G+ID
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRID 706

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           +A L++  + +    P+  +++ L+  L + E+  +A
Sbjct: 707 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 192/402 (47%), Gaps = 5/402 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+  + + D++K  G   +V   N ++  L      + A   F         P++ 
Sbjct: 421 KAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAV 480

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I          EA K+ + M D    PN   +T L+ +  K GR ++  ++ ++M
Sbjct: 481 TYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEM 540

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R+GC P++   N  +  +   G +E+   +   +KN G  PD  +YT ++ G  K G +
Sbjct: 541 LRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFA 600

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA EL     E+G   +   +NT+ +G+CK G   K   LL+ MK +   P  ++Y ++
Sbjct: 601 HEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSV 660

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K  ++  A  +F+E    G E++  + +SL+ G     + +   +++AY + E++
Sbjct: 661 IDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG-----FGKVGRIDEAYLIMEEL 715

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K    +  T+  ++  L K ++  EAL+      ++   P  IT++ +I  LC   K 
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +KA +    M +    P+  +Y  +I+ L +     +A  L+
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLF 817



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 184/365 (50%), Gaps = 5/365 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I++ + + G +  +   N  +  +    E E     F E  + G  P++ +++I+I    
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA ++   M + G   +   +  +++  CKSG++ +A ++L++M   G +P + 
Sbjct: 596 KAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  ++ GL  + R++EAY +    K+ G++ +V  Y++++DGF KVGR +EA  ++ E 
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+TPNV T+N L +   K     + +   + MK   C P+ I+YS L++GL K  K 
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A   ++EM + GF+ +     +++ GL     +  +++E A  +FEK  +K  V D  
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLA----KAGNIVE-ADTLFEKFKEKGGVADSA 830

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            Y  +I  L    +  +A      A   G    T T   ++ +L     I++A ++  ++
Sbjct: 831 IYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVL 890

Query: 432 YEHAK 436
            E AK
Sbjct: 891 RETAK 895



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 174/371 (46%), Gaps = 9/371 (2%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E L L  +P  L    ++D + KA  +++   +F  IK  G       +  L+  LV   
Sbjct: 539 EMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAG 598

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
               A + F      G   ++  ++ +I  +C      +A ++++ M   G+ P V T+ 
Sbjct: 599 FAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            +++ L K  RL EA  + ++    G + N+  Y+ L+ G   VGR++EAY ++  +   
Sbjct: 659 SVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 718

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           GL P+VYT+  ++D   K    +EA+       +   TPN +T++ L +G CK     K 
Sbjct: 719 GLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKA 778

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
               + M+K+   P+  +Y+T+++GL K G I  A ++F++    G   D  + N+++ G
Sbjct: 779 FVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEG 838

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI---HLHHA 396
           L        +   DAY++FE+   K       T  +++ +L K +  ++A I    L   
Sbjct: 839 L-----SNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRET 893

Query: 397 IEMGHIPRTIT 407
            +  H  R+ T
Sbjct: 894 AKAQHAARSWT 904



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 154/337 (45%), Gaps = 13/337 (3%)

Query: 144 DCMF-------DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
           DCM        + GY  NV  FT L+    + GR+  AL +LD+M     +P++  YN  
Sbjct: 217 DCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVC 276

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           +      G+V+ A++    +K +GL  D  TYT+++   CK  R NEA+EL     +   
Sbjct: 277 IDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQ 336

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            P    +NT+  GY   G       LL+  +++ C+P  +SY+ +L+ L + G++  A+ 
Sbjct: 337 VPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALK 396

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
            F+EM +     +    N ++  LC     +   LE A  V + M       +  T  I+
Sbjct: 397 KFEEMKKDAIP-NLSTYNIMIDMLC-----KAGKLETALVVRDAMKDAGLFPNVITVNIM 450

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +  L K ++ D+A             P  +T+ ++I+ L   G++D+A  L   M +  +
Sbjct: 451 VDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           IP+   Y  LI    +  +  D   +Y   L+ G  P
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 99/447 (22%), Positives = 192/447 (42%), Gaps = 41/447 (9%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK+  L+E      +++K     + S + +L+ AL    + +  +  F +    G A N 
Sbjct: 176 IKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNV 235

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             F+ +IR +  +     A  ++D M  N   P+V  + + ++   K+G++  A +   +
Sbjct: 236 HLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHE 295

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G   +  TY  ++  LC   R+ EA E+  ++  +   P  Y Y  ++ G+   G+
Sbjct: 296 MKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGK 355

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  LL     +G  P+VV++N + +   ++G   + +   + MKK + +P+  +Y+ 
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK-DAIPNLSTYNI 414

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++ L K GK+  A+ +   M   G   +   +N ++  LC     +   L+DA  +FE 
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLC-----KAQRLDDACSIFEG 469

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL--CGE 418
           +  K    D  TY  +I  LG+  + DEA       ++   IP  + + ++I+    CG 
Sbjct: 470 LDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGR 529

Query: 419 ---------------------------------GKIDKALLLLFLMYEHAKIPSRTSYDM 445
                                            G+I+K   L   +     IP   SY +
Sbjct: 530 KEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTI 589

Query: 446 LITKLDQLEKSYDACALYGAALKQGVI 472
           LI  L +   +++A  L+    +QG +
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCV 616



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 167/386 (43%), Gaps = 6/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N LLM +    +     +   E S  G  P++ T   ++  +       EA   I  M 
Sbjct: 133 YNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMR 192

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
              + P  + +T L+ +L  S      L +  QM  +G   N+  +  L++     GRV+
Sbjct: 193 KLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVD 252

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A  +L  +K++ L+PDV  Y   +D F K G+ + A +  +E    G+  + VT+ ++ 
Sbjct: 253 AALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMI 312

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              CK     + V L + M +   +P   +Y+T++ G    GK   A S+ +   R G  
Sbjct: 313 GVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCI 372

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N +L  L       K  +++A + FE+M KK ++ +  TY I+I  L K  K +
Sbjct: 373 PSVVSYNCILSCL-----GRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLE 426

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            AL+      + G  P  IT N ++  LC   ++D A  +   +      P   +Y  LI
Sbjct: 427 TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L +  +  +A  LY   L    IP
Sbjct: 487 EGLGRHGRVDEAYKLYEQMLDANQIP 512


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 182/383 (47%), Gaps = 42/383 (10%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I++F  +        V  +  L+  L   +  + AV    E    G  P+S TF+++I  
Sbjct: 208 IEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLING 267

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C K D     K++D MF  G  PN  T+  ++N LC  G+L +A+ +LD+M    C PN
Sbjct: 268 LCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPN 327

Query: 190 IQTYNCLLKGLCYVGR-----------------------------------VEEAYEMLM 214
             TY  L+ GL   GR                                    EEA  +  
Sbjct: 328 DVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWK 387

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +   G +P++  Y+A++DG C+ G+ +EA E+L E + +G TPN  T+++L  G+ K G
Sbjct: 388 KMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTG 447

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              K + + K M K NC+P++I YS L++GL + GK+R A+ ++  M+  G   D    +
Sbjct: 448 NSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYS 507

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIH 392
           S++ GLC         +E   ++F +M  + S + P   TY I++R L K      A+  
Sbjct: 508 SMIHGLC-----NAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDL 562

Query: 393 LHHAIEMGHIPRTITFNNVIQAL 415
           L+  ++ G  P  IT N  + AL
Sbjct: 563 LNSMLDRGCNPDLITCNIFLNAL 585



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 195/392 (49%), Gaps = 7/392 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  FN ++ A+  L   + A++ F E +     P+ +T+  ++   C ++   EA  ++
Sbjct: 187 NVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 246

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M   G  P+  TF +L+N LCK G +    +++D M   GC PN  TYN ++ GLC  
Sbjct: 247 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 306

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G++++A  +L  +      P+  TY  +++G  K GRS + + LL+   ERG   N   +
Sbjct: 307 GKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAY 366

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           +TL +G  KE    + +GL K M ++ C P+ + YS L++GL + GK+  A  I  EMV 
Sbjct: 367 STLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVN 426

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   +    +SL++G       +K     A +V+++M K   V +   Y ++I  L + 
Sbjct: 427 KGCTPNAFTYSSLIKGFFKTGNSQK-----AIRVWKEMAKNNCVPNEICYSVLIHGLCED 481

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL--FLMYEHAKIPSRT 441
            K  EA++   H +  G  P  + ++++I  LC  G ++  L L    L  E    P   
Sbjct: 482 GKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVV 541

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +Y++L+  L +      A  L  + L +G  P
Sbjct: 542 TYNILLRALCKQNSISHAIDLLNSMLDRGCNP 573



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/398 (23%), Positives = 158/398 (39%), Gaps = 82/398 (20%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR--------------------------- 183
           Y    +TF  L+ +   SG      +V D+M R                           
Sbjct: 76  YKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAI 135

Query: 184 ---------IGCKPNIQTYNCLLKGLCYVG---RVEEAYEMLMNVKNDGLKPDVYTYTAV 231
                      C+  ++++N +L  +   G   R  E YE  +  K + + P+V ++  V
Sbjct: 136 ELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTN-ISPNVLSFNLV 194

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           +   CK+G  + A+E+  E   +   P+V T+ TL +G CKE    + V LL  M+   C
Sbjct: 195 IKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGC 254

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P  ++++ L+NGL K G +     +   M   G   +E   N+++ GLC+K       L
Sbjct: 255 FPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK-----L 309

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL--------HHA------- 396
           + A  + ++M     V +  TYG +I  L K  ++ +  +HL        HHA       
Sbjct: 310 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG-VHLLSSLEERGHHANEYAYST 368

Query: 397 ---------------------IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
                                +E G  P  + ++ +I  LC EGK+D+A  +L  M    
Sbjct: 369 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 428

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             P+  +Y  LI    +   S  A  ++    K   +P
Sbjct: 429 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVP 466



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 107/205 (52%), Gaps = 2/205 (0%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           +E + ++  + + G   ++  ++ L+  L    + + A +   E  + G  PN++T+S +
Sbjct: 380 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSL 439

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I+ +    +  +A +V   M  N   PN   +++L++ LC+ G+L+EA+ +   M   G 
Sbjct: 440 IKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGL 499

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEML--MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           +P++  Y+ ++ GLC  G VE   ++   M  +    +PDV TY  ++   CK    + A
Sbjct: 500 RPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHA 559

Query: 245 MELLNEAIERGVTPNVVTFNTLFNG 269
           ++LLN  ++RG  P+++T N   N 
Sbjct: 560 IDLLNSMLDRGCNPDLITCNIFLNA 584



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 34/165 (20%), Positives = 70/165 (42%), Gaps = 23/165 (13%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE--ASSYGLAPNSWTF 123
           L+E + ++  +   G    V  ++ ++  L      E  +K F+E         P+  T+
Sbjct: 484 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 543

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL------------------ 165
           +I++R  C +N    A  +++ M D G +P++ T  I +N+L                  
Sbjct: 544 NILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELV 603

Query: 166 ---CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
               K  R+  A ++++ M +    PN  T+  ++  LC   +V+
Sbjct: 604 VRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 182/383 (47%), Gaps = 42/383 (10%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I++F  +        V  +  L+  L   +  + AV    E    G  P+S TF+++I  
Sbjct: 192 IEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLING 251

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C K D     K++D MF  G  PN  T+  ++N LC  G+L +A+ +LD+M    C PN
Sbjct: 252 LCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPN 311

Query: 190 IQTYNCLLKGLCYVGR-----------------------------------VEEAYEMLM 214
             TY  L+ GL   GR                                    EEA  +  
Sbjct: 312 DVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWK 371

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +   G +P++  Y+A++DG C+ G+ +EA E+L E + +G TPN  T+++L  G+ K G
Sbjct: 372 KMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTG 431

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              K + + K M K NC+P++I YS L++GL + GK+R A+ ++  M+  G   D    +
Sbjct: 432 NSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYS 491

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIH 392
           S++ GLC         +E   ++F +M  + S + P   TY I++R L K      A+  
Sbjct: 492 SMIHGLC-----NAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDL 546

Query: 393 LHHAIEMGHIPRTITFNNVIQAL 415
           L+  ++ G  P  IT N  + AL
Sbjct: 547 LNSMLDRGCNPDLITCNIFLNAL 569



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 195/392 (49%), Gaps = 7/392 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  FN ++ A+  L   + A++ F E +     P+ +T+  ++   C ++   EA  ++
Sbjct: 171 NVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 230

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M   G  P+  TF +L+N LCK G +    +++D M   GC PN  TYN ++ GLC  
Sbjct: 231 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 290

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G++++A  +L  +      P+  TY  +++G  K GRS + + LL+   ERG   N   +
Sbjct: 291 GKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAY 350

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           +TL +G  KE    + +GL K M ++ C P+ + YS L++GL + GK+  A  I  EMV 
Sbjct: 351 STLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVN 410

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   +    +SL++G       +K     A +V+++M K   V +   Y ++I  L + 
Sbjct: 411 KGCTPNAFTYSSLIKGFFKTGNSQK-----AIRVWKEMAKNNCVPNEICYSVLIHGLCED 465

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL--FLMYEHAKIPSRT 441
            K  EA++   H +  G  P  + ++++I  LC  G ++  L L    L  E    P   
Sbjct: 466 GKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVV 525

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +Y++L+  L +      A  L  + L +G  P
Sbjct: 526 TYNILLRALCKQNSISHAIDLLNSMLDRGCNP 557



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/398 (23%), Positives = 158/398 (39%), Gaps = 82/398 (20%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR--------------------------- 183
           Y    +TF  L+ +   SG      +V D+M R                           
Sbjct: 60  YKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAI 119

Query: 184 ---------IGCKPNIQTYNCLLKGLCYVG---RVEEAYEMLMNVKNDGLKPDVYTYTAV 231
                      C+  ++++N +L  +   G   R  E YE  +  K + + P+V ++  V
Sbjct: 120 ELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTN-ISPNVLSFNLV 178

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           +   CK+G  + A+E+  E   +   P+V T+ TL +G CKE    + V LL  M+   C
Sbjct: 179 IKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGC 238

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P  ++++ L+NGL K G +     +   M   G   +E   N+++ GLC+K       L
Sbjct: 239 FPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKG-----KL 293

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL--------HHA------- 396
           + A  + ++M     V +  TYG +I  L K  ++ +  +HL        HHA       
Sbjct: 294 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG-VHLLSSLEERGHHANEYAYST 352

Query: 397 ---------------------IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
                                +E G  P  + ++ +I  LC EGK+D+A  +L  M    
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 412

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             P+  +Y  LI    +   S  A  ++    K   +P
Sbjct: 413 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVP 450



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 107/205 (52%), Gaps = 2/205 (0%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           +E + ++  + + G   ++  ++ L+  L    + + A +   E  + G  PN++T+S +
Sbjct: 364 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSL 423

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I+ +    +  +A +V   M  N   PN   +++L++ LC+ G+L+EA+ +   M   G 
Sbjct: 424 IKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGL 483

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEML--MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           +P++  Y+ ++ GLC  G VE   ++   M  +    +PDV TY  ++   CK    + A
Sbjct: 484 RPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHA 543

Query: 245 MELLNEAIERGVTPNVVTFNTLFNG 269
           ++LLN  ++RG  P+++T N   N 
Sbjct: 544 IDLLNSMLDRGCNPDLITCNIFLNA 568



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 34/165 (20%), Positives = 70/165 (42%), Gaps = 23/165 (13%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE--ASSYGLAPNSWTF 123
           L+E + ++  +   G    V  ++ ++  L      E  +K F+E         P+  T+
Sbjct: 468 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 527

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL------------------ 165
           +I++R  C +N    A  +++ M D G +P++ T  I +N+L                  
Sbjct: 528 NILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELV 587

Query: 166 ---CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
               K  R+  A ++++ M +    PN  T+  ++  LC   +V+
Sbjct: 588 VRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 632


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 191/391 (48%), Gaps = 27/391 (6%)

Query: 70  IDIFDSI-KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
           + +FD + ++ G   SV  +N  L AL   N  + A + F +    G  P+ +T+SI++R
Sbjct: 22  VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLR 81

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR-IGCK 187
             C   +  +A++++  + ++G   NV T++++++  CK+ R+ +ALE+   M    GC 
Sbjct: 82  GLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCV 141

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++ T+N LLKGLC   R+ EA+ +   +   G +P+V +Y+ ++DG CK GR +EA  L
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRL 201

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E +E+   P++V + +   G CK     +     + M  +    D +++ST++  L K
Sbjct: 202 WEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCK 261

Query: 308 WGK-----------------IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
            G                  +  A   F+EM+         + N+L+  +C     +   
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVC-----KSKR 316

Query: 351 LEDAYQVFEKMTKKVSVTDP---GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           L D   +F++M        P    TY I++  L K K+ DEA   ++     G  P  +T
Sbjct: 317 LPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
           ++ ++  LC  GK+D+A  LL  M +    P
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFP 407



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 206/433 (47%), Gaps = 26/433 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG-LAPNS 120
           KA  L +  ++   +++ G   +V  ++ ++      +  + A++ F   S+ G   P+ 
Sbjct: 85  KAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDV 144

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+ +++  C+     EA  + + M   G  PNV +++ L++ LCK+GRL EA  + ++
Sbjct: 145 VTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEE 204

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M    C P++  Y   + GLC   RV EA +    +   G K D   ++ V+   CK G 
Sbjct: 205 MVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGH 264

Query: 241 SNEAME----------LLNEA-------IERGVTPNVVTFNTLFNGYCKEGTPMKGVGL- 282
           + EA            +L+EA       I R   P+   FNTL +  CK      GV L 
Sbjct: 265 AEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLF 324

Query: 283 --LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
             +K MK+  C P+  +Y+ +++ L K  ++  A  +  EM  +G   D    ++L+ GL
Sbjct: 325 QRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGL 384

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     +   L+ A  + E+M+K+    D  T   ++  L K  K D AL HL      G
Sbjct: 385 C-----KLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARG 439

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
             P  +T+N ++  LC  G+ID+A+  L  M      P   SY ++IT L +  ++  A 
Sbjct: 440 STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAH 499

Query: 461 ALYGAALKQGVIP 473
           A++   +K+GV+P
Sbjct: 500 AIFQEMVKRGVLP 512



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 172/335 (51%), Gaps = 14/335 (4%)

Query: 97  MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN---DFFEARKVIDCMFDNGYHP 153
           ML+E   A K F E  S    P++  F+ +I   C      D     + +  M +    P
Sbjct: 281 MLDE---ACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPP 337

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N+ T+ I+V++LCK+ +L EA E++++M   G  P++ TY+ L+ GLC +G+++ A ++L
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +  +G+ PD +T  ++++   K G+ + A+  L     RG TP++VT+NTL +G CK 
Sbjct: 398 EEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA 457

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   + +  L  M    C PD  SY+ ++  L + G+   A +IF+EMV+ G   D  + 
Sbjct: 458 GRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLY 517

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           +SLL GL     E+  L        E +   +   D   + +V+  L K  K ++A   +
Sbjct: 518 HSLLDGLARNGLEDLAL--------ELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVV 569

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
               + G      T+ NV++ L   GK+DKA  L+
Sbjct: 570 ERMADAGFPADAFTYINVVRGLRKLGKVDKARQLV 604



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 165/345 (47%), Gaps = 26/345 (7%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           GY  +V T+   +++L K+   + A E   QM R G  P+  TY+ +L+GLC  G +++A
Sbjct: 33  GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE-AIERGVTPNVVTFNTLFN 268
            E+L  ++  G+K +V TY+ V+DG CK  R ++A+E+    +   G  P+VVTFN+L  
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G C      +   L + M K  C P+ ISYSTLL+GL K G++  A  +++EMV      
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D     S + GLC     + + + +A     KM  K S  D   +  VI  L K    +E
Sbjct: 213 DLVAYTSFVTGLC-----KANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEE 267

Query: 389 A----LIHL-------------HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           A    + HL                I   H P    FN +I A+C   ++   +LL   M
Sbjct: 268 AQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRM 327

Query: 432 YEHAKI---PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               +    P+  +Y++++  L + ++  +A  L       G+ P
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP 372



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 133/253 (52%), Gaps = 3/253 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++  L    + + A +  +E ++YGL+P+  T+S ++   C       A  +++ M 
Sbjct: 342 YNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS 401

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+  T   ++N+L K+G++  AL  L+ M   G  P++ TYN LL GLC  GR++
Sbjct: 402 KEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRID 461

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA   L  +      PDV++YT ++   C+ G++  A  +  E ++RGV P+ V +++L 
Sbjct: 462 EAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLL 521

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G  + G        L+L+K   C PD + +  +++GL K GK   A  + + M   GF 
Sbjct: 522 DGLARNGLEDLA---LELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFP 578

Query: 328 VDERMMNSLLRGL 340
            D     +++RGL
Sbjct: 579 ADAFTYINVVRGL 591



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 3/253 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E  ++ + +   G +  V  ++ L+  L  L + + A     E S  G+ P+S+
Sbjct: 351 KAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSF 410

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T + ++           A   ++ M   G  P++ T+  L++ LCK+GR+ EA+  L +M
Sbjct: 411 TDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKM 470

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C P++ +Y  ++  LC  G+   A+ +   +   G+ PD   Y +++DG  + G  
Sbjct: 471 VAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLE 530

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ELL  ++     P+ V    + +G CK G       +++ M       D  +Y  +
Sbjct: 531 DLALELLKTSL---CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINV 587

Query: 302 LNGLLKWGKIRPA 314
           + GL K GK+  A
Sbjct: 588 VRGLRKLGKVDKA 600



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 3/192 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +   +   +++K  G+   +  +N LL  L      + A+ F ++  +    P+ +
Sbjct: 421 KAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF 480

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I+I   C       A  +   M   G  P+   +  L++ L ++G    ALE+L   
Sbjct: 481 SYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTS 540

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               CKP+   +  ++ GLC  G+ E+A E++  + + G   D +TY  V+ G  K+G+ 
Sbjct: 541 L---CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKV 597

Query: 242 NEAMELLNEAIE 253
           ++A +L+++A E
Sbjct: 598 DKARQLVDDASE 609


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 195/397 (49%), Gaps = 6/397 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A    E   + +  K+ G   SV  +N +L  L    + E A++   E      APN  T
Sbjct: 356 AGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTT 414

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I   C   +   A KV D M + G  PN+ T  I+++ LCK+ +L EA  +   + 
Sbjct: 415 YNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLD 474

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              C P+ +T+  L+ GL   GRV++AY +   + +    P+V  YT+++  F K GR  
Sbjct: 475 HKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKE 534

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +  ++  E + RG +P+++  N+  +   K G   KG  L + +K +  +PD  SYS L+
Sbjct: 535 DGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILI 594

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +GL+K G  R    +F EM   G  +D    N+++ G C     +K     AYQ+ E+M 
Sbjct: 595 HGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDK-----AYQLLEEMK 649

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            K       TYG V+  L K  + DEA +    A  +G     + ++++I      G+ID
Sbjct: 650 TKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRID 709

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           +A L+L  + +    P+  +++ L+  L + E+  +A
Sbjct: 710 EAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEA 746



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 199/412 (48%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+  + + D++K+ G   ++   N ++  L    + + A   F        +P+S 
Sbjct: 424 KAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSR 483

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF  +I     +    +A  + + M D+   PNV  +T L+ +  K GR ++  ++  +M
Sbjct: 484 TFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEM 543

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P++   N  +  +   G VE+   +   +K  GL PDV +Y+ ++ G  K G S
Sbjct: 544 VHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFS 603

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            E  +L  E  E+G+  +V+ +NT+ +G+CK G   K   LL+ MK +   P  ++Y ++
Sbjct: 604 RETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSV 663

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K  ++  A  +F+E    G +++  + +SL+ G     + +   +++AY + E++
Sbjct: 664 VDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDG-----FGKVGRIDEAYLILEEL 718

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K    +  T+  ++  L K ++ DEA +   +   +   P  +T++ +I  LC   K 
Sbjct: 719 MQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKF 778

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +KA +    M +    P+  +Y  +I  L +     +A  L+      G +P
Sbjct: 779 NKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVP 830



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 197/469 (42%), Gaps = 58/469 (12%)

Query: 8   NSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLK 67
           N+F+      RN + + Q  + +  A   LS   S++L               +K+  LK
Sbjct: 137 NAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVEL-----------VASFVKSHKLK 185

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   + + ++K     + S +  L+ AL   N  +  +  F +                 
Sbjct: 186 EAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQ----------------- 228

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                             M + GY  NV  FT LV    + GR+  AL +LD+M      
Sbjct: 229 ------------------MQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFT 270

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            ++  YN  +     VG+V+ A++    +K  GL PD  TYT ++   CK  R +EA+EL
Sbjct: 271 ADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVEL 330

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E       P V  +NT+  GY   G   +   LL+  K++ C+P  I+Y+ +L  L +
Sbjct: 331 FEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGR 390

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK+  A+ I  EM R     +    N L+  LC K+ E    LE A +V + M +    
Sbjct: 391 KGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLC-KAGE----LEAALKVQDTMKEAGLF 444

Query: 368 TDPGTYGIVIRTLGKGKKTDEA---LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            +  T  I+I  L K +K DEA    + L H +     P + TF ++I  L   G++D A
Sbjct: 445 PNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV---CSPDSRTFCSLIDGLGRRGRVDDA 501

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L   M +  +IP+   Y  LI    +  +  D   +Y   + +G  P
Sbjct: 502 YSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSP 550



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 8/311 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA   +E   +F  +K+ G +  V  +N ++       + + A +   E  + GL P  
Sbjct: 598 VKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTV 657

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+  ++      +   EA  + +     G   NV  ++ L++   K GR+ EA  +L++
Sbjct: 658 VTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEE 717

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           + + G  PN  T+NCLL  L     ++EA     N+KN    P+  TY+ +++G C + +
Sbjct: 718 LMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRK 777

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            N+A     E  ++G+ PN +T+ T+  G  K G  M+  GL    K    +PD   Y+ 
Sbjct: 778 FNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNA 837

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY---QV 357
           ++ GL    K   A  +F+E    G  V+ +    LL  L      + D LE A     V
Sbjct: 838 MIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDAL-----HKADCLEQAAIVGAV 892

Query: 358 FEKMTKKVSVT 368
             +M K    T
Sbjct: 893 LREMAKSQHAT 903



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 168/386 (43%), Gaps = 6/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N  LM +      +   +   E S  G   ++     ++  +   +   EA  VI+ M 
Sbjct: 136 YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMR 195

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
              + P  + +T L+ +L  + R    L +  QM  IG + N+  +  L++     GR++
Sbjct: 196 KFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRID 255

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A  +L  +K++    D+  Y   +D F KVG+ + A +  +E   +G+ P+ VT+ TL 
Sbjct: 256 AALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLI 315

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              CK     + V L + +     +P   +Y+T++ G    GK   A S+ +   R G  
Sbjct: 316 GVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI 375

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N +L  L       K  +E+A ++ ++M ++ +  +  TY I+I  L K  + +
Sbjct: 376 PSVIAYNCILTCL-----GRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELE 429

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            AL       E G  P  +T N +I  LC   K+D+A  +   +      P   ++  LI
Sbjct: 430 AALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLI 489

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L +  +  DA +LY   L    IP
Sbjct: 490 DGLGRRGRVDDAYSLYEKMLDSDQIP 515


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 180/348 (51%), Gaps = 12/348 (3%)

Query: 69  RIDIFDSIKKD------GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           RI + +S+ K+      G N  V  F+ ++  L  + + + A     +  ++G +P+  T
Sbjct: 209 RIGVVESVYKEMIRRRIGVN--VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT 266

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  YC     F+A  ++  M     HPN  TF IL++  C+   +  A +V ++M 
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           R G +PN+ TYN L+ GLC  G+++EA  +   +   GLKP+V TY A+++GFCK     
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA E+L++  +RG+ PNV+TFNTL + Y K G       L  +M      P+  +Y+ L+
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-LEDAYQVFEKM 361
            G  + G ++ A  + KEM   G + D    N L+  LC K    K + L D   + EK 
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKK 506

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            ++ ++    TY ++I+      K +EA   L+  +E G IP   T++
Sbjct: 507 GRRANIV---TYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD 551



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 167/318 (52%), Gaps = 8/318 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    ++  D+ + +K  G + SV  +N ++       +   A     E  +  + PN  
Sbjct: 241 KVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEI 300

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I+I  +C   +   A+KV + M   G  PNV T+  L+N LC +G+L EAL + D+M
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G KPN+ TYN L+ G C    ++EA EML ++   GL P+V T+  ++D + K GR 
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRM 420

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A  L +  ++ GV PNV T+N L  G+C+EG   +   L K M+      D ++Y+ L
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 480

Query: 302 LNGLLKWGKIRPAVSIFKEMV---RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           ++ L K G+ R AV +  EM    + G   +    N L++G C      K  LE+A ++ 
Sbjct: 481 VDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFC-----NKGKLEEANRLL 535

Query: 359 EKMTKKVSVTDPGTYGIV 376
            +M +K  + +  TY I+
Sbjct: 536 NEMLEKGLIPNRTTYDIL 553



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 201/400 (50%), Gaps = 10/400 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   +   ++ FD     G   S    N +L++LV           + E     +  N 
Sbjct: 170 VKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNV 229

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF ++I   C    F +A  V++ M   G+ P+V T+  +++  CK+G++ +A  +L +
Sbjct: 230 VTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M      PN  T+N L+ G C    V  A ++   ++  GL+P+V TY ++++G C  G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+ L ++    G+ PNVVT+N L NG+CK+    +   +L  + KR   P+ I+++T
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++   K G++  A  +   M+  G   +    N L+ G C      +  +++A ++ ++
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFC-----REGNVKEARKLAKE 464

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM---GHIPRTITFNNVIQALCG 417
           M       D  TY I++  L K  +T +A+  L     M   G     +T+N +I+  C 
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCN 524

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
           +GK+++A  LL  M E   IP+RT+YD+L  + + +EK +
Sbjct: 525 KGKLEEANRLLNEMLEKGLIPNRTTYDIL--RDEMMEKGF 562



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 174/343 (50%), Gaps = 6/343 (1%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            S   S+G A NS    +++  Y    +   A +  D   D G+  +  +   ++ SL K
Sbjct: 148 LSVLGSWGCA-NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVK 206

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            GR+     V  +M R     N+ T++ ++ GLC VG+ ++A +++ ++K  G  P V T
Sbjct: 207 EGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT 266

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++DG+CK G+  +A  LL E + + + PN +TFN L +G+C++        + + M+
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           ++   P+ ++Y++L+NGL   GK+  A+ +  +M   G + +    N+L+ G C     +
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFC-----K 381

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           K +L++A ++ + + K+    +  T+  +I   GK  + D+A +     ++ G  P   T
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +N +I   C EG + +A  L   M  +       +Y++L+  L
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 145/361 (40%), Gaps = 58/361 (16%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           +G   N   F  ++    N  ++ + R ++D    N ++ N T F               
Sbjct: 101 FGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIF--------------H 146

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           +L VL   G  GC  +I   + L+      G ++ A E      + G +    +   ++ 
Sbjct: 147 SLSVL---GSWGCANSI-IVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLV 202

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
              K GR      +  E I R +  NVVTF+ + NG CK G   K   +++ MK     P
Sbjct: 203 SLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSP 262

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
             I+Y+T+++G  K GK+  A ++ KEMV      +E   N L+ G C       + +  
Sbjct: 263 SVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFC-----RDENVTA 317

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A +VFE+M ++                                   G  P  +T+N++I 
Sbjct: 318 AKKVFEEMQRQ-----------------------------------GLQPNVVTYNSLIN 342

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            LC  GK+D+AL L   M      P+  +Y+ LI    + +   +A  +     K+G+ P
Sbjct: 343 GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAP 402

Query: 474 Q 474
            
Sbjct: 403 N 403



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 3/136 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +VS +N L++        + A K   E    GL  +  T++I++   C K +  +A +++
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497

Query: 144 D---CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           D    M   G   N+ T+ +L+   C  G+L+EA  +L++M   G  PN  TY+ L   +
Sbjct: 498 DEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEM 557

Query: 201 CYVGRVEEAYEMLMNV 216
              G + +    L NV
Sbjct: 558 MEKGFIPDIDGHLYNV 573


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 159/306 (51%), Gaps = 9/306 (2%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++ ++   C      +A  +   M  +  + P+V +++IL++  CK   L  A ++  QM
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             + C PN+ TYN  L GL   GR+ +A  +   +   G  PDV TY+ ++ GF    + 
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A EL    I RG  PN VT+N L +G CKE  P +   L + M +R C PD+++Y+TL
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L G    GKI  AV +F EMV  G + D    N LL+G             +A Q+F+ M
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP-----GEAKQLFQVM 683

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH--IPRTITFNNVIQALCGEG 419
             +    D  ++ I+I  L K K+ D+A + +   +E  H   P  +T+N++I  LCGE 
Sbjct: 684 VSRQCKPDTVSHNIMIDGLSKAKRLDDA-VEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 742

Query: 420 KIDKAL 425
           ++ +A+
Sbjct: 743 RLSEAM 748



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 42/333 (12%)

Query: 88  FNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           +N LL +L    +   A   FS   S     P+  ++SI+I  +C  ++   A K+   M
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLK---------------------------------- 172
            D    PNVTT+   +N L + GR+                                   
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568

Query: 173 -EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
            +A E+ + M   GC+PN  TYNCLL GLC   + +EA+E+   +   G  PD  TYT +
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           + GFC VG+  +A+E+ +E + +G  P+VV +N L  G+ + G P +   L ++M  R C
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR-FGFEVDERMMNSLLRGLCMKSWEEKDL 350
            PD +S++ +++GL K  ++  AV +F+ M +  G   D    NSL+ GLC    E++  
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLC---GEQR-- 743

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
           L +A +VF+++ +     DP  + +++  +  G
Sbjct: 744 LSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKCG 776



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 162/325 (49%), Gaps = 8/325 (2%)

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            P+  T   ++  LCK+GR+  AL +L+ M + G  P++ T++ L+  LC   +++EA E
Sbjct: 371 QPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE 430

Query: 212 ML--MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI-ERGVTPNVVTFNTLFN 268
            L  M+ K        ++Y ++++  CK  + ++A  + +  + ER   P+VV+++ L +
Sbjct: 431 FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILID 490

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G+CK     +   L K M   NC+P+  +Y+  LNGL++ G+I  A  +++EMV  G   
Sbjct: 491 GFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSP 550

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D    ++L+ G  +    ++     A+++FE M  +    +  TY  ++  L K  K DE
Sbjct: 551 DVITYSTLIHGFSLARKHDQ-----AHELFETMISRGCRPNAVTYNCLLHGLCKESKPDE 605

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A       +E G  P  +T+  ++   C  GKI++A+ +   M      P   +Y+ L+ 
Sbjct: 606 AHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLK 665

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
              +  K  +A  L+   + +   P
Sbjct: 666 GFFRAGKPGEAKQLFQVMVSRQCKP 690



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 175/389 (44%), Gaps = 10/389 (2%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           LL+  V+ ++   A K F      G  P++  +S M+  +C   +  EA K+   M    
Sbjct: 240 LLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVES 299

Query: 151 YHP-NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
             P N   +T  ++ LCKSG++++A E    M       +   Y+ L++ L   GR+++A
Sbjct: 300 KAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKA 358

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            E  + +    ++P   T  +V+   CK GR + A+ LL   I+RG  P++ T + L N 
Sbjct: 359 EEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINE 418

Query: 270 YCKEGTPMKGVGLLKLMKKR--NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV-RFGF 326
            CK     +    L+ M ++  +      SY++LLN L K  K+  A +IF  MV    F
Sbjct: 419 LCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSF 478

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             D    + L+ G C     + D L  A +++++M     V +  TY   +  L +  + 
Sbjct: 479 VPDVVSYSILIDGFC-----KIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRI 533

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +A       +  G  P  IT++ +I       K D+A  L   M      P+  +Y+ L
Sbjct: 534 ADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCL 593

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +  L +  K  +A  L+   +++G  P R
Sbjct: 594 LHGLCKESKPDEAHELFRKMVERGCDPDR 622



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 113/521 (21%), Positives = 192/521 (36%), Gaps = 113/521 (21%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+   LK+   +F+ +   G   +   +  L+ +       + AV+FF E    G  P+S
Sbjct: 140 IRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSS 199

Query: 121 WTFSIMIRC-----------------------------------YCNKNDFFEARKVIDC 145
             +  +  C                                   +  ++   EA K+   
Sbjct: 200 TLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRA 259

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP-NIQTYNCLLKGLCYVG 204
           M  +G  P+ T ++ +V + CK   L EA ++  +M      P N   +   L GLC  G
Sbjct: 260 MVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSG 319

Query: 205 RVEEA-----------------YEML-----------------MNVKNDGLKPDVYTYTA 230
           ++E+A                 Y+ML                 + +    ++P   T  +
Sbjct: 320 KIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHS 379

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVT---------------------------- 262
           V+   CK GR + A+ LL   I+RG  P++ T                            
Sbjct: 380 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKI 439

Query: 263 ---------FNTLFNGYCKEGTPMKGVGLLKLM-KKRNCLPDKISYSTLLNGLLKWGKIR 312
                    +N+L N  CK     +   +   M  +R+ +PD +SYS L++G  K  ++ 
Sbjct: 440 SSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELG 499

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A  ++K+M+      +    N+ L GL  K       + DA  V+E+M       D  T
Sbjct: 500 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGR-----IADAQGVYEEMVAAGCSPDVIT 554

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y  +I      +K D+A       I  G  P  +T+N ++  LC E K D+A  L   M 
Sbjct: 555 YSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 614

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           E    P R +Y  L+     + K   A  ++   + +G  P
Sbjct: 615 ERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDP 655



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 144/314 (45%), Gaps = 15/314 (4%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           +  +V T+  L++ L +   LK+A +V ++M   G  PN  TY  L++  CY    +EA 
Sbjct: 125 FKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAV 184

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
                + + G KP    Y  V +     G+  E   +    +E+ V   ++    L   +
Sbjct: 185 RFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNF 244

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM-VRFGFEVD 329
             +   ++   L + M K  C PD   YS ++    K   +  A  +F EM V     ++
Sbjct: 245 VIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLN 304

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL---GKGKKT 386
                + L GLC KS +    +E A++    M + +S + P  Y ++IR L   G+  K 
Sbjct: 305 NVAWTAFLSGLC-KSGK----IEQAFEACRTMQESLSSSQP-VYDMLIRLLIESGRIDKA 358

Query: 387 DEALIHLH-HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           +EA + +    I+    P + T ++VIQ LC  G++D AL LL  M +    P   ++ M
Sbjct: 359 EEACLEIAGRNIQ----PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSM 414

Query: 446 LITKLDQLEKSYDA 459
           LI +L + +K  +A
Sbjct: 415 LINELCKADKIQEA 428



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 90/449 (20%), Positives = 174/449 (38%), Gaps = 78/449 (17%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           L +   A+ FF    +     + +T++ ++       D  +A +V + M   G  PN  T
Sbjct: 107 LRDGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFT 166

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE--------- 208
           + +LV S C      EA+    +M   G KP+   Y  + + L   G+  E         
Sbjct: 167 YAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDL 226

Query: 209 ----AYEMLMN----------------------VKNDGLKPDVYTYTAVMDGFCKVGRSN 242
               A EM++                       +   G KPD   Y+ ++   CK+   +
Sbjct: 227 EKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLD 286

Query: 243 EAMELLNE-AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK------------- 288
           EA +L  E A+E     N V +    +G CK G   +     + M++             
Sbjct: 287 EAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLI 346

Query: 289 ---------------------RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
                                RN  P   +  +++  L K G++  A+S+ + M++ G+ 
Sbjct: 347 RLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYC 406

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV--SVTDPGTYGIVIRTLGKGKK 385
            D    + L+  LC     + D +++A +  + M +K+    +   +Y  ++ +L K KK
Sbjct: 407 PDMATHSMLINELC-----KADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKK 461

Query: 386 TDEALIHLHHAI-EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             +A       + E   +P  ++++ +I   C   ++ +A  L   M +   +P+ T+Y+
Sbjct: 462 VHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 521

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
             +  L +  +  DA  +Y   +  G  P
Sbjct: 522 AFLNGLMRKGRIADAQGVYEEMVAAGCSP 550


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 200/403 (49%), Gaps = 7/403 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQE--TAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           F+ + +     S+ +FN +L +LV  N     TA+        +G+ P+ +TF+I+I CY
Sbjct: 54  FNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCY 113

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C+  +   A  ++  +   GY P+  TF  L+  LC +G++KEAL   D +  +G   + 
Sbjct: 114 CHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQ 173

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  L+ GLC +G    A +ML  +    +K +V  Y  ++D  CK     +A EL ++
Sbjct: 174 FSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQ 233

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            I + ++P+VVTF+ L  G+C  G   +  GL + M  +N  PD  +++ L++ L K G 
Sbjct: 234 MIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGN 293

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           ++ A ++   M++ G   +    +SL+ G C+ +   K     A  V   +++  +  + 
Sbjct: 294 LKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNK-----AKHVLNTISQMGAAPNA 348

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            +Y  +I    K K  DEAL   +     G  P  +T+N++I  LC  G+I  A  L+  
Sbjct: 349 HSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDE 408

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M+++ +  +  +Y+ LI  L +      A AL      QG+ P
Sbjct: 409 MHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQP 451



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 162/305 (53%), Gaps = 5/305 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  F+ L+    ++ + E A   F E     + P+ +TF+I++   C + +   A+ ++ 
Sbjct: 243 VVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLV 302

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G  PNV T++ L++  C   ++ +A  VL+ + ++G  PN  +Y  ++ G C + 
Sbjct: 303 VMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIK 362

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            V+EA  +  +++  G+ PD  TY +++DG CK GR + A EL++E  + G   N+ T+N
Sbjct: 363 MVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYN 422

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +  CK     + + L+K +K +   PD  +++ L+ GL K G+++ A  +F++++  
Sbjct: 423 CLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSK 482

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G+ V+    N ++ GLC     ++ L ++A  +  KM     + D  TY  +I+ L    
Sbjct: 483 GYSVNAWTYNIMVNGLC-----KEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKD 537

Query: 385 KTDEA 389
           + ++A
Sbjct: 538 ENEKA 542



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 189/394 (47%), Gaps = 8/394 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE +   D +   G +     +  L+  L  + E  TA++   +     +  N   ++ 
Sbjct: 154 VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNT 213

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A ++   M      P+V TF+ L+   C  G+L+EA  +  +M    
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  T+N L+  LC  G ++ A  ML+ +  +G+ P+V TY+++MDG+C V + N+A 
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +LN   + G  PN  ++ T+ NG+CK     + + L   M+ +   PDK++Y++L++GL
Sbjct: 334 HVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGL 393

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I  A  +  EM   G   +    N L+  LC     +   ++ A  + +K+  + 
Sbjct: 394 CKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALC-----KNHHVDQAIALVKKIKDQG 448

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  T+ I+I  L K  +   A       +  G+     T+N ++  LC EG  D+A 
Sbjct: 449 IQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAE 508

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL---DQLEKS 456
            LL  M ++  IP   +Y+ LI  L   D+ EK+
Sbjct: 509 ALLSKMDDNGIIPDAVTYETLIQALFHKDENEKA 542



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 168/325 (51%), Gaps = 5/325 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A + +S+  +  ++P+  TFS +I  +C      EA  +   M     +P+  TF ILV+
Sbjct: 227 AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK G LK A  +L  M + G  PN+ TY+ L+ G C V +V +A  +L  +   G  P
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           + ++Y  +++GFCK+   +EA+ L N+   +G+ P+ VT+N+L +G CK G       L+
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELV 406

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M       +  +Y+ L++ L K   +  A+++ K++   G + D    N L+ GLC  
Sbjct: 407 DEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLC-- 464

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   L++A  VF+ +  K    +  TY I++  L K    DEA   L    + G IP
Sbjct: 465 ---KVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIP 521

Query: 404 RTITFNNVIQALCGEGKIDKALLLL 428
             +T+  +IQAL  + + +KA  LL
Sbjct: 522 DAVTYETLIQALFHKDENEKAEKLL 546



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 142/276 (51%), Gaps = 1/276 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        VD + K   LK   ++   + K+G   +V  ++ L+    ++N+   A  
Sbjct: 275 NPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKH 334

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
             +  S  G APN+ ++  MI  +C      EA  + + M   G  P+  T+  L++ LC
Sbjct: 335 VLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLC 394

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSGR+  A E++D+M   G   NI TYNCL+  LC    V++A  ++  +K+ G++PD+Y
Sbjct: 395 KSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMY 454

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+  ++ G CKVGR   A ++  + + +G + N  T+N + NG CKEG   +   LL  M
Sbjct: 455 TFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKM 514

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
                +PD ++Y TL+  L    +   A  + +EM+
Sbjct: 515 DDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMI 550



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 118/219 (53%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + ++I + G   +   +  ++     +   + A+  F++    G+AP+  T++ +I   C
Sbjct: 335 VLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLC 394

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A +++D M DNG   N+ T+  L+++LCK+  + +A+ ++ ++   G +P++ 
Sbjct: 395 KSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMY 454

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+N L+ GLC VGR++ A ++  ++ + G   + +TY  +++G CK G  +EA  LL++ 
Sbjct: 455 TFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKM 514

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
            + G+ P+ VT+ TL      +    K   LL+ M  R+
Sbjct: 515 DDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARD 553



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F+ ++  G       +N L+  L        A +   E    G   N +
Sbjct: 360 KIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIF 419

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C  +   +A  ++  + D G  P++ TF IL+  LCK GRLK A +V   +
Sbjct: 420 TYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDL 479

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   N  TYN ++ GLC  G  +EA  +L  + ++G+ PD  TY  ++        +
Sbjct: 480 LSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDEN 539

Query: 242 NEAMELLNEAIERGVT 257
            +A +LL E I R V 
Sbjct: 540 EKAEKLLREMIARDVV 555


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 192/413 (46%), Gaps = 35/413 (8%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +   ++  G    V  +  L+  L    + + AV+   E    G+ PN   +S ++
Sbjct: 131 QAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLL 190

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           + YC    +    KV + M   G  P+V  +T L++SLC+ G++K+A +V+D+M   G +
Sbjct: 191 QGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLE 250

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN+ TYN L+  +C  G V+EA  +  N+   G+  D  TY  ++ G   V   +EAM L
Sbjct: 251 PNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGL 310

Query: 248 LNEAI--ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           L E I  E  V PNVVTFN++ +G CK G   +   +  +M +  C  + ++++ L+ GL
Sbjct: 311 LEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGL 370

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE------------------- 346
           L+  K++ A+ +  EM   G E D    + L+ G C K W+                   
Sbjct: 371 LRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFC-KMWQVDRAESLLSKMRRDGIEPE 429

Query: 347 ------------EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
                       E+ ++E A   F++M K   + D   Y  +I    + +    A   L 
Sbjct: 430 LVHYIPLLAALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDRKSAEEFLK 488

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           H ++ G IP ++T++ +I      G +  A  +L  M     +P    +D LI
Sbjct: 489 HMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLI 541



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 201/406 (49%), Gaps = 16/406 (3%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETAVK 106
           R+  + R    ++  PL E   +  S+       SV D   +N +L AL        A  
Sbjct: 46  RAEASARLNRLLRLVPLPESPALLSSLP------SVRDAVSYNTVLAALCRQGGCLDAAL 99

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
           F     ++   P + +++ ++R  C +    +A  ++  M  +G  P+V T+  L+  LC
Sbjct: 100 FLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLC 159

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
            +  + +A+E+L +M   G +PN+  Y+CLL+G C  GR E   ++   +   G++PDV 
Sbjct: 160 DAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVV 219

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            YT ++D  C+ G+  +A +++++ +ERG+ PNVVT+N L N  CKEG+  + + L   M
Sbjct: 220 MYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNM 279

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM--NSLLRGLCMKS 344
            ++    D ++Y+TL+ GL    ++  A+ + +EM+     V+  ++  NS++ GLC   
Sbjct: 280 LEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLC--- 336

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
             +   +  A+QV + M +     +  T+ ++I  L +  K  +A+  +      G  P 
Sbjct: 337 --KTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPD 394

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           + T++ +I   C   ++D+A  LL  M      P    Y  L+  L
Sbjct: 395 SFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAAL 440



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 174/358 (48%), Gaps = 7/358 (1%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           ++ +++ ++   C +    +A   +  +  +   P   ++T L+ +LC   R  +A+ +L
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
             M   G +P++ TY  L++GLC    V++A E+L  +   G++P+V  Y+ ++ G+CK 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           GR     ++  E   RG+ P+VV +  L +  C+EG   K   ++  M +R   P+ ++Y
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + L+N + K G ++ A+S+   M+  G  +D    N+L+ GL      E D   +A  + 
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL--SGVLEMD---EAMGLL 311

Query: 359 EKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           E+M    ++ +P   T+  VI  L K  +  +A        E G     +TFN +I  L 
Sbjct: 312 EEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLL 371

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
              K+ KA+ L+  M      P   +Y +LI    ++ +   A +L     + G+ P+
Sbjct: 372 RVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPE 429



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 169/360 (46%), Gaps = 11/360 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA--SSYGLAPN 119
           K   +KE + + +++ + G       +N L+  L  + E + A+    E       + PN
Sbjct: 265 KEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPN 324

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             TF+ +I   C      +A +V D M +NG   N+ TF +L+  L +  ++K+A+E++D
Sbjct: 325 VVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMD 384

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M   G +P+  TY+ L+ G C + +V+ A  +L  ++ DG++P++  Y  ++   C+ G
Sbjct: 385 EMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQG 444

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
              +A    +E + +    +VV ++T+ +G C+          LK M     +PD ++YS
Sbjct: 445 MMEQARNFFDE-MHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYS 503

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L+N     G +  A  + K+M   GF  D  + +SL++G   K   EK L     ++  
Sbjct: 504 MLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVL-----ELIR 558

Query: 360 KMTKKVSVTDPGTYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +MT K    D      +   L    +GK   +++      +  G +  +    N++  LC
Sbjct: 559 EMTAKDIALDSKIISTIYTCLVANNEGKALLQSVPGFDTEVSKGAVISSHELTNMLHKLC 618



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 143/285 (50%), Gaps = 4/285 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++   + D + ++G   ++  FN L+  L+ +++ + A++   E +S GL P+S+
Sbjct: 337 KTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSF 396

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+I  +C       A  ++  M  +G  P +  +  L+ +LC+ G +++A    D+M
Sbjct: 397 TYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM 456

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +  CK ++  Y+ ++ G C +   + A E L ++ ++GL PD  TY+ +++ F   G  
Sbjct: 457 HK-NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDL 515

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A  +L +    G  P+V  F++L  GY  +G   K + L++ M  ++   D    ST+
Sbjct: 516 GAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTI 575

Query: 302 LNGLLK--WGK-IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
              L+    GK +  +V  F   V  G  +    + ++L  LC K
Sbjct: 576 YTCLVANNEGKALLQSVPGFDTEVSKGAVISSHELTNMLHKLCNK 620


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 177/363 (48%), Gaps = 5/363 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           F+++L +LV      T +  F +  S G+ PN  T +I+I C+C+      A  V   + 
Sbjct: 96  FDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANIL 155

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             GYHP+  T   L+  LC  G +K AL   D++   G + +  +Y  L+ GLC  G  +
Sbjct: 156 KRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETK 215

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
               +L  ++   +KPDV  YT ++   CK  R  +A +L +E I +G++PNV T+NTL 
Sbjct: 216 AVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLI 275

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G+C  G   +   LL  MK +N  PD  +++ L++ L K GKI  A+S+F+EM      
Sbjct: 276 YGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMF 335

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +     SL+ GLC     +   LE A  + +KM ++    D  +Y I++  L KG + +
Sbjct: 336 PNIVTYTSLIDGLC-----KNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            A     H +  G+     T+N +I  LC  G     + L   M     +P   ++  +I
Sbjct: 391 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTII 450

Query: 448 TKL 450
             L
Sbjct: 451 CAL 453



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 165/329 (50%), Gaps = 5/329 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F +I K G +      N L+  L    E + A+ F  +  + G   +  ++  +I   C
Sbjct: 150 VFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLC 209

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +     +++  +  +   P+V  +T +++ LCK+ R+ +A ++  +M   G  PN+ 
Sbjct: 210 KAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVF 269

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G C +G ++EA+ +L  +K   + PDVYT+  ++D   K G+ +EA+ L  E 
Sbjct: 270 TYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEM 329

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             + + PN+VT+ +L +G CK     + + L K MK++   PD  SY+ LL+ L K G++
Sbjct: 330 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRL 389

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A   F+ ++  G+ ++ R  N ++ GLC     +  L  D   +  KM  K  + D  
Sbjct: 390 ENAKQFFQHLLVKGYHLNVRTYNVMINGLC-----KAGLFGDVMDLKSKMEGKGCMPDAI 444

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           T+  +I  L +  + D+A   L   I  G
Sbjct: 445 TFKTIICALFEKDENDKAEKFLREMIARG 473



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 137/298 (45%), Gaps = 5/298 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P    F  +++SL K+      + +  Q    G  PN+ T N L+   C++  +  A+ +
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
             N+   G  PD  T   ++ G C  G    A+   ++ + +G   + V++ TL NG CK
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G       LL+ ++  +  PD + Y+T+++ L K  ++  A  ++ EM+  G   +   
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N+L+ G C+        L++A+ +  +M  K    D  T+ I+I  LGK  K DEA+  
Sbjct: 271 YNTLIYGFCIMGN-----LKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISL 325

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                     P  +T+ ++I  LC    +++A+ L   M E    P   SY +L+  L
Sbjct: 326 FEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDAL 383



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 100/196 (51%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D++  +   G + +V  +N L+    ++   + A    +E     + P+ +TF+I+I   
Sbjct: 254 DLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDAL 313

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             +    EA  + + M      PN+ T+T L++ LCK+  L+ A+ +  +M   G +P++
Sbjct: 314 GKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDV 373

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  LL  LC  GR+E A +   ++   G   +V TY  +++G CK G   + M+L ++
Sbjct: 374 YSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSK 433

Query: 251 AIERGVTPNVVTFNTL 266
              +G  P+ +TF T+
Sbjct: 434 MEGKGCMPDAITFKTI 449



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 94/191 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LKE   + + +K    N  V  FN L+ AL    + + A+  F E     + PN  T++ 
Sbjct: 284 LKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTS 343

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C  +    A  +   M + G  P+V ++TIL+++LCK GRL+ A +    +   G
Sbjct: 344 LIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKG 403

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              N++TYN ++ GLC  G   +  ++   ++  G  PD  T+  ++    +   +++A 
Sbjct: 404 YHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAE 463

Query: 246 ELLNEAIERGV 256
           + L E I RG+
Sbjct: 464 KFLREMIARGL 474



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 2/167 (1%)

Query: 36  SLSTAESLDLKE-NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLM 93
           + S    + LK  NP        +D + K   + E I +F+ +K      ++  +  L+ 
Sbjct: 287 AFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLID 346

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
            L   +  E A+    +    G+ P+ ++++I++   C       A++    +   GYH 
Sbjct: 347 GLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHL 406

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           NV T+ +++N LCK+G   + +++  +M   GC P+  T+  ++  L
Sbjct: 407 NVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICAL 453



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 5/181 (2%)

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P    +  +L+ L+K       +S+FK+    G   +   +N L+   C  +      + 
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAH-----IT 145

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A+ VF  + K+    D  T   +I+ L    +   AL      +  G     +++  +I
Sbjct: 146 FAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLI 205

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             LC  G+      LL  +  H+  P    Y  +I  L + ++  DAC LY   + +G+ 
Sbjct: 206 NGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGIS 265

Query: 473 P 473
           P
Sbjct: 266 P 266


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 177/363 (48%), Gaps = 5/363 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN +L +LV      T +  F +  S G  P+  T +I++ C+C+      A  V+  + 
Sbjct: 66  FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             GYHPN  T   L+  LC  G +K+AL   DQ+   G + N  +Y  L+ GLC  G  +
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
               +L  ++   +KPDV  Y  ++   CK     +A +L +E I +G++PNVVT+N L 
Sbjct: 186 AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALV 245

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G+C  G   +   LL  MK +N  PD  +++TL++ L K GK++ A  +   M++   +
Sbjct: 246 YGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIK 305

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    NSL+ G     +   + +++A  VF  M +     +  TY  +I  L K K  D
Sbjct: 306 PDVVTYNSLIDG-----YFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA+           IP  +T+ ++I  LC    +++A+ L   M E    P   SY +L+
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 420

Query: 448 TKL 450
             L
Sbjct: 421 DAL 423



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 191/409 (46%), Gaps = 21/409 (5%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LKE   + + +K    N  V  FN L+ AL    + + A    +      + P+  T++ 
Sbjct: 254 LKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNS 313

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  Y   N    A+ V   M  +G  PNV T+T +++ LCK   + EA+ + ++M    
Sbjct: 314 LIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKN 373

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+I TY  L+ GLC    +E A  +   +K  G++PDVY+YT ++D  CK GR   A 
Sbjct: 374 MIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAK 433

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E     + +G   NV T+N + NG CK     + + L   M+ + C+PD I++ T++  L
Sbjct: 434 EFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICAL 493

Query: 306 LKWGKIRPAVSIFKEMVRFGFE-------VDERMMNSLLRGLCMK-----------SWEE 347
            +  +   A  I +EM+  G +        + +++ +++   C+K            +  
Sbjct: 494 FEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFL 553

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
            + L+ A  VF  M +     +   Y I+I  L K K  DEA+            P  +T
Sbjct: 554 VNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVT 613

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           + ++I ALC    +++A+ LL  M EH   P   SY +L   LD L KS
Sbjct: 614 YTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTIL---LDGLCKS 659



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 154/286 (53%), Gaps = 5/286 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   +SE    G++PN  T++ ++  +C      EA  +++ M     +P+V TF  L++
Sbjct: 222 ACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLID 281

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +L K G++K A  VL  M +   KP++ TYN L+ G  ++ +V+ A  +  ++   G+ P
Sbjct: 282 ALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTP 341

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V TYT ++DG CK    +EAM L  E   + + P++VT+ +L +G CK     + + L 
Sbjct: 342 NVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALC 401

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           K MK++   PD  SY+ LL+ L K G++  A   F+ ++  G+ ++ +  N ++ GLC  
Sbjct: 402 KKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLC-- 459

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
              + DL  +A  +  KM  K  + D  T+  +I  L +  + D+A
Sbjct: 460 ---KADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKA 502



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 175/360 (48%), Gaps = 7/360 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +   D +   G   +   +  L+  L    E +   +   +   + + P+   ++ 
Sbjct: 149 IKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNT 208

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A  +   M   G  PNV T+  LV   C  G LKEA  +L++M    
Sbjct: 209 IIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN 268

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ T+N L+  L   G+++ A  +L  +    +KPDV TY +++DG+  + +   A 
Sbjct: 269 INPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAK 328

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +     + GVTPNV T+ T+ +G CKE    + + L + MK +N +PD ++Y++L++GL
Sbjct: 329 YVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGL 388

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K   +  A+++ K+M   G + D      LL  LC     +   LE+A + F+++  K 
Sbjct: 389 CKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALC-----KGGRLENAKEFFQRLLVKG 443

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE-MGHIPRTITFNNVIQALCGEGKIDKA 424
              +  TY ++I  L K     EA+  L   +E  G +P  ITF  +I AL  + + DKA
Sbjct: 444 YHLNVQTYNVMINGLCKADLFGEAM-DLKSKMEGKGCMPDAITFKTIICALFEKDENDKA 502



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 181/386 (46%), Gaps = 28/386 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F+ +K       +  +  L+  L   +  E A+    +    G+ P+ +
Sbjct: 355 KEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVY 414

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I++   C       A++    +   GYH NV T+ +++N LCK+    EA+++  +M
Sbjct: 415 SYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM 474

Query: 182 GRIGCKPNIQTYNC----------------LLKGLCYVG-------RVEEAYEMLMNVKN 218
              GC P+  T+                  +L+ +   G       R++EA  +L  +  
Sbjct: 475 EGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTK 534

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
             +KPDV TY  +MDG+  V     A  +     + GVTPNV  +  + +G CK+ T  +
Sbjct: 535 ACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDE 594

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            + L + MK +N  P+ ++Y++L++ L K   +  A+++ KEM   G + D      LL 
Sbjct: 595 AMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 654

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           GLC KS      LE A ++F+++  K    +   Y  +I  L K    DEAL       +
Sbjct: 655 GLC-KSGR----LEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMED 709

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKA 424
            G +P  +TF+ +I AL  + + DKA
Sbjct: 710 KGCMPDAVTFDIIIWALFEKDENDKA 735



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 23/288 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA---- 117
           KA    E +D+   ++  G       F  ++ AL   +E + A K   E  + GL     
Sbjct: 460 KADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARK 519

Query: 118 -------------------PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
                              P+  T+  ++  Y   N+   A+ V   M   G  PNV  +
Sbjct: 520 VRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCY 579

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
           TI+++ LCK   + EA+ + ++M      PNI TY  L+  LC    +E A  +L  +K 
Sbjct: 580 TIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKE 639

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            G++PDVY+YT ++DG CK GR   A E+    + +G   NV  +  + N  CK G   +
Sbjct: 640 HGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDE 699

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            + L   M+ + C+PD +++  ++  L +  +   A  I  EM+  G 
Sbjct: 700 ALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 136/301 (45%), Gaps = 7/301 (2%)

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A+   D+M  +   P    +N +L  L           +    +++G  PD+ T   +M+
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
            FC +     A  +L   ++RG  PN +T NTL  G C  G   K +     +  +    
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           +++SY TL+NGL K G+ +    + +++     + D  M N+++  LC     +  LL D
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLC-----KNKLLGD 221

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVI 412
           A  ++ +M  K    +  TY  ++          EA   L + +++ +I P   TFN +I
Sbjct: 222 ACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAF-SLLNEMKLKNINPDVCTFNTLI 280

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            AL  EGK+  A ++L +M +    P   +Y+ LI     L K  +A  ++ +  + GV 
Sbjct: 281 DALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVT 340

Query: 473 P 473
           P
Sbjct: 341 P 341


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 191/406 (47%), Gaps = 5/406 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E    F  +K+ G    +   ND+L   + LN  E A   ++E     ++   +TF+IM+
Sbjct: 197 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMV 256

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    +AR+ I  M   G+ PNV ++  +++     G ++ A  +LD M   G +
Sbjct: 257 NVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE 316

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TY  L+ G+C  GR+EEA  +   +   GL P+  TY  ++DG+C  G    A   
Sbjct: 317 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 376

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E +++G+ P+V T+N L +    EG   +   ++K M+K+  +PD I+Y+ L+NG  +
Sbjct: 377 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 436

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G  + A  +  EM+  G E       SL+  L       ++ +++A  +FEK+  +   
Sbjct: 437 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL-----SRRNRMKEADDLFEKILDQGVS 491

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D   +  ++         + A + L         P  +TFN ++Q  C EGK+++A +L
Sbjct: 492 PDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML 551

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L  M      P   SY+ LI+   +     DA  +    L  G  P
Sbjct: 552 LDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 597



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 182/351 (51%), Gaps = 8/351 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I D+++  G       +  L+  +      E A   F +    GL PN+ T++ +I  YC
Sbjct: 306 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 365

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           NK D   A    D M   G  P+V+T+ +LV++L   GR+ EA +++ +M + G  P+  
Sbjct: 366 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 425

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G    G  ++A+++   + + G++P   TYT+++    +  R  EA +L  + 
Sbjct: 426 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 485

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++GV+P+V+ FN + +G+C  G   +   LLK M +++  PD+++++TL+ G  + GK+
Sbjct: 486 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 545

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +  EM R G + D    N+L+ G     +  +  ++DA++V ++M          
Sbjct: 546 EEARMLLDEMKRRGIKPDHISYNTLISG-----YGRRGDIKDAFRVRDEMLSIGFNPTLL 600

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           TY  +I+ L K ++ D A   L   +  G  P   T+ ++I+   G G +D
Sbjct: 601 TYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE---GMGNVD 648



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 85/173 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE  D+F+ I   G +  V  FN ++         E A     E     + P+  TF+ 
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 534

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C +    EAR ++D M   G  P+  ++  L++   + G +K+A  V D+M  IG
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 594

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
             P + TYN L+K LC     + A E+L  + N G+ PD  TY ++++G   V
Sbjct: 595 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 647



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 58/121 (47%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+       + E A     E    G+ P+  +++ +I  Y  + D  +A +V D M 
Sbjct: 532 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 591

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G++P + T+  L+  LCK+     A E+L +M   G  P+  TY  L++G+  V  + 
Sbjct: 592 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLV 651

Query: 208 E 208
           E
Sbjct: 652 E 652


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 191/406 (47%), Gaps = 5/406 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E    F  +K+ G    +   ND+L   + LN  E A   ++E     ++   +TF+IM+
Sbjct: 175 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMV 234

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    +AR+ I  M   G+ PNV ++  +++     G ++ A  +LD M   G +
Sbjct: 235 NVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE 294

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TY  L+ G+C  GR+EEA  +   +   GL P+  TY  ++DG+C  G    A   
Sbjct: 295 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 354

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E +++G+ P+V T+N L +    EG   +   ++K M+K+  +PD I+Y+ L+NG  +
Sbjct: 355 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 414

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G  + A  +  EM+  G E       SL+  L       ++ +++A  +FEK+  +   
Sbjct: 415 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL-----SRRNRMKEADDLFEKILDQGVS 469

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D   +  ++         + A + L         P  +TFN ++Q  C EGK+++A +L
Sbjct: 470 PDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML 529

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L  M      P   SY+ LI+   +     DA  +    L  G  P
Sbjct: 530 LDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 575



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 182/351 (51%), Gaps = 8/351 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I D+++  G       +  L+  +      E A   F +    GL PN+ T++ +I  YC
Sbjct: 284 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 343

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           NK D   A    D M   G  P+V+T+ +LV++L   GR+ EA +++ +M + G  P+  
Sbjct: 344 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 403

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G    G  ++A+++   + + G++P   TYT+++    +  R  EA +L  + 
Sbjct: 404 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 463

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++GV+P+V+ FN + +G+C  G   +   LLK M +++  PD+++++TL+ G  + GK+
Sbjct: 464 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 523

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +  EM R G + D    N+L+ G     +  +  ++DA++V ++M          
Sbjct: 524 EEARMLLDEMKRRGIKPDHISYNTLISG-----YGRRGDIKDAFRVRDEMLSIGFNPTLL 578

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           TY  +I+ L K ++ D A   L   +  G  P   T+ ++I+   G G +D
Sbjct: 579 TYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE---GMGNVD 626



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 85/173 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE  D+F+ I   G +  V  FN ++         E A     E     + P+  TF+ 
Sbjct: 453 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 512

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C +    EAR ++D M   G  P+  ++  L++   + G +K+A  V D+M  IG
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 572

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
             P + TYN L+K LC     + A E+L  + N G+ PD  TY ++++G   V
Sbjct: 573 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 625



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 58/121 (47%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+       + E A     E    G+ P+  +++ +I  Y  + D  +A +V D M 
Sbjct: 510 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 569

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G++P + T+  L+  LCK+     A E+L +M   G  P+  TY  L++G+  V  + 
Sbjct: 570 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLV 629

Query: 208 E 208
           E
Sbjct: 630 E 630


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 192/403 (47%), Gaps = 7/403 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + K+G + +   ++ L+  L      + A+    E    G+ P  +T+++ I   C
Sbjct: 297 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 356

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA +++  M   G  PNV T+T L++ L + G+L+ A+ +  +M + G  PN  
Sbjct: 357 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 416

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+  LC  GR   A ++   ++  G   +  TY  ++ G C  G   +AM L  + 
Sbjct: 417 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 476

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           ++ G  P VVT+NTL NGY  +G       LL LMK+  C PD+ +Y+ L++G  KWGK+
Sbjct: 477 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 536

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED-AYQVFEKMTKKVSVTDP 370
             A   F+EMV  G   +     +L+ G        KD   D A  + E+M +     + 
Sbjct: 537 ESASFYFQEMVECGLNPNPVSYTTLIDG------HSKDGKVDIALSLLERMEEMGCNPNV 590

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            +Y  VI  L K  +  EA        E G +P  IT+  +I  LC  G+   A  +   
Sbjct: 591 ESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD 650

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M +   +P+  +Y  LI  L Q  K+ +A  L     ++G+ P
Sbjct: 651 MEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAP 693



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 186/377 (49%), Gaps = 5/377 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +KK G   +V  +  L+  L  L + E A+  + +    GL PN+ T++ +I   C    
Sbjct: 371 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 430

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           F  A K+   M  +G   N  T+  ++  LC  G +++A+ + ++M ++G  P + TYN 
Sbjct: 431 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 490

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G    G V  A  +L  +K +G +PD +TY  ++ GF K G+   A     E +E G
Sbjct: 491 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 550

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           + PN V++ TL +G+ K+G     + LL+ M++  C P+  SY+ ++NGL K  +   A 
Sbjct: 551 LNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAE 610

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            I  +M   G   +     +L+ GLC     +      A+++F  M K+  + +  TY  
Sbjct: 611 KICDKMAEQGLLPNVITYTTLIDGLCRNGRTQF-----AFKIFHDMEKRKCLPNLYTYSS 665

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I  L +  K DEA I L      G  P  +TF ++I      G+ID A LLL  M +  
Sbjct: 666 LIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVG 725

Query: 436 KIPSRTSYDMLITKLDQ 452
             P+  +Y +L+  L +
Sbjct: 726 CKPNYRTYSVLLKGLQK 742



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 204/447 (45%), Gaps = 34/447 (7%)

Query: 61  IKASPLKERI----DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           IKA   +E I    D  + I   G  +S+   N LL+ L      E A   + +  + G+
Sbjct: 177 IKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGI 236

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P+  TF+ +I     K    EA  ++  +F     P+V T+T L+   C++  L  A  
Sbjct: 237 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 296

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           V D+M + GC PN  TY+ L+ GLC  GRV+EA +ML  +   G++P VYTYT  +   C
Sbjct: 297 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 356

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
            +    EA+EL+    +RG  PNV T+  L +G  + G     +GL   M K   +P+ +
Sbjct: 357 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 416

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL------ 350
           +Y+ L+N L   G+   A+ IF  M   G   + +  N +++GLC+    EK +      
Sbjct: 417 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 476

Query: 351 ------------------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
                                   + +A ++ + M +     D  TY  ++    K  K 
Sbjct: 477 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 536

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           + A  +    +E G  P  +++  +I     +GK+D AL LL  M E    P+  SY+ +
Sbjct: 537 ESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAV 596

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I  L +  +  +A  +     +QG++P
Sbjct: 597 INGLSKENRFSEAEKICDKMAEQGLLP 623



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 189/387 (48%), Gaps = 23/387 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ + K G   +V  +N L+   +       A +        G  P+ WT++ ++  + 
Sbjct: 472 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 531

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A      M + G +PN  ++T L++   K G++  AL +L++M  +GC PN++
Sbjct: 532 KWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVE 591

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           +YN ++ GL    R  EA ++   +   GL P+V TYT ++DG C+ GR+  A ++ ++ 
Sbjct: 592 SYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 651

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            +R   PN+ T+++L  G C+EG   +   LLK M+++   PD++++++L++G +  G+I
Sbjct: 652 EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRI 711

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGL---CMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
             A  + + MV  G + + R  + LL+GL   C+   E+  +  +A   F    K V+  
Sbjct: 712 DHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVN-- 769

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
               + IV   L +               E+G  P   T++ ++  LC +G+  +A  L+
Sbjct: 770 ----FEIVSNLLARMS-------------EIGCEPTLDTYSTLVSGLCRKGRFYEAEQLV 812

Query: 429 FLMYEHAKIPSR-TSYDMLITKLDQLE 454
             M E    P R   Y +LI     LE
Sbjct: 813 KDMKERGFCPDREIYYSLLIAHCKNLE 839



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 181/382 (47%), Gaps = 29/382 (7%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A+         G  PN  +++ +I     +N F EA K+ D M + G  PNV T+T L
Sbjct: 572 DIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTL 631

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ LC++GR + A ++   M +  C PN+ TY+ L+ GLC  G+ +EA  +L  ++  GL
Sbjct: 632 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 691

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE-------- 273
            PD  T+T+++DGF  +GR + A  LL   ++ G  PN  T++ L  G  KE        
Sbjct: 692 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKV 751

Query: 274 GTPMKGV----------------GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
               + V                 LL  M +  C P   +YSTL++GL + G+   A  +
Sbjct: 752 AVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 811

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
            K+M   GF  D  +  SLL   C K+ E    ++ A ++F  +  K        Y  +I
Sbjct: 812 VKDMKERGFCPDREIYYSLLIAHC-KNLE----VDHALKIFHSIEAKGFQLHLSIYRALI 866

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L K  + +EA     + +E       I +  ++  L  EG++D  + LL +M      
Sbjct: 867 CALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFT 926

Query: 438 PSRTSYDMLITKLDQLEKSYDA 459
           P+  +Y +L  +L ++ KS ++
Sbjct: 927 PNIQTYVILGRELSRIGKSIES 948



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 179/393 (45%), Gaps = 40/393 (10%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
            AP      +MI+   N+ +       ++ +   G+  ++ +   L+  L K   ++ A 
Sbjct: 166 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 225

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA----- 230
            +  QM   G +P++ T+N L+  L   G+V EA  +L  +    L PDV+TYT+     
Sbjct: 226 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 285

Query: 231 ------------------------------VMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
                                         +++G C  GR +EA+++L E IE+G+ P V
Sbjct: 286 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTV 345

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            T+       C      + + L+  MKKR C P+  +Y+ L++GL + GK+  A+ ++ +
Sbjct: 346 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHK 405

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M++ G   +    N+L+  LC+           A ++F  M    S+ +  TY  +I+ L
Sbjct: 406 MLKEGLVPNTVTYNALINELCVGGR-----FSTALKIFHWMEGHGSLANTQTYNEIIKGL 460

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
             G   ++A++     ++MG +P  +T+N +I     +G ++ A  LL LM E+   P  
Sbjct: 461 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 520

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +Y+ L++   +  K   A   +   ++ G+ P
Sbjct: 521 WTYNELVSGFSKWGKLESASFYFQEMVECGLNP 553



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 155/352 (44%), Gaps = 29/352 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K +   E   I D + + G   +V  +  L+  L      + A K F +       PN +
Sbjct: 602 KENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 661

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I   C +    EA  ++  M   G  P+  TFT L++     GR+  A  +L +M
Sbjct: 662 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721

Query: 182 GRIGCKPNIQTYNCLLKGL---CY-----VGRVEEA------------YEMLMNV----K 217
             +GCKPN +TY+ LLKGL   C      V    EA            +E++ N+     
Sbjct: 722 VDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMS 781

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G +P + TY+ ++ G C+ GR  EA +L+ +  ERG  P+   + +L   +CK     
Sbjct: 782 EIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVD 841

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
             + +   ++ +        Y  L+  L K G++  A ++F  M+   +  DE +   L+
Sbjct: 842 HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLV 901

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
            GL +K  E    L+   ++   M  K    +  TY I+ R L +  K+ E+
Sbjct: 902 DGL-LKEGE----LDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIES 948



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 3/192 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E      +  S  G  P   T+S ++   C K  F+EA +++  M + G+ P+   +  L
Sbjct: 771 EIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSL 830

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + + CK+  +  AL++   +   G + ++  Y  L+  LC  G+VEEA  +  N+     
Sbjct: 831 LIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEW 890

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
             D   +T ++DG  K G  +  M+LL+    +  TPN+ T+  L     + G  ++   
Sbjct: 891 NADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEP 950

Query: 282 L---LKLMKKRN 290
           L   LK++K  N
Sbjct: 951 LADKLKVLKDSN 962


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 226/497 (45%), Gaps = 81/497 (16%)

Query: 52  LQAQRFV---DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET----- 103
           LQ +R +    R  +  L++ +++FD +     + SV  FN +L  +   +   +     
Sbjct: 13  LQLERIIVEQHRSGSLGLEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGA 72

Query: 104 --AVKFFSEASSYG---LAPNSWTFSIMIRCYCNKN--DFF------EARKVIDCMFDNG 150
             AV  F+  +  G   LA ++ TF I+IRC+CN    DF        +R  +  M D+G
Sbjct: 73  ALAVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDG 132

Query: 151 YH--PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV----- 203
           Y+  PNV ++ +++N L K G + +A  +  +M   G  PNI TYN ++ GLC       
Sbjct: 133 YNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDK 192

Query: 204 -----------GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
                      G++EEA  +L  +   GL+PDV TY+ ++D +CK+GR  EA  + +  +
Sbjct: 193 AEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMV 252

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL--------------------------- 285
            RG  P+  T+ TL +GY  +G  +    LL L                           
Sbjct: 253 RRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLD 312

Query: 286 --------MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
                   M+++   P+ ++Y+T+++ L K G++  AVS F +MV  G   D     SL+
Sbjct: 313 KAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLI 372

Query: 338 RGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
            GLC +  W++ + L      FE + + +   +      ++ +L K  +  EA       
Sbjct: 373 HGLCTIGEWKKVEKLS-----FEMINRGIH-PNAIFLNTIMDSLCKEGRVLEAHDFFDQI 426

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           I +G  P  +++  +I   C +GK+D+++ LL  M      P   +Y  L+    +  + 
Sbjct: 427 IHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRV 486

Query: 457 YDACALYGAALKQGVIP 473
            DA ALY     + V P
Sbjct: 487 DDALALYREMFSKDVKP 503



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 203/424 (47%), Gaps = 24/424 (5%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+   + +DG       FN L+ A       + A+  F E    G +PN  T++ +I   
Sbjct: 281 DLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDIL 340

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A      M   G  P++ TFT L++ LC  G  K+  ++  +M   G  PN 
Sbjct: 341 CKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNA 400

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
              N ++  LC  GRV EA++    + + G+KPDV +YT ++DG+C  G+ +E+++LL  
Sbjct: 401 IFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGR 460

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G+ P+ VT++ L NGYCK G     + L + M  ++  P+ I+Y+ +L+GL   G+
Sbjct: 461 MVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGR 520

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A   + ++V  G ++     N +L GLC     E   +++A ++F+ +  K    + 
Sbjct: 521 VVAAREFYMKIVDSGIQLGINTYNIVLGGLC-----ENSFVDEALRMFQGLRSKEFQLEV 575

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            T+ I+I  L K  +  +A       +  G +P  I +  +IQ+   EG ++++  L   
Sbjct: 576 RTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLS 635

Query: 431 MYEHAKIPSRTSYDMLI----------------TKLDQLEKSYDACALYGAALKQGVIPQ 474
           M ++    +  + + ++                TK+D+ E S +A     A L   ++ +
Sbjct: 636 MEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEAST---AVLLISIVSE 692

Query: 475 RKPQ 478
           RK Q
Sbjct: 693 RKYQ 696



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 185/408 (45%), Gaps = 42/408 (10%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT---- 157
           E AV+   + S  GL P+  T+S++I  YC      EAR + D M   G +P+  T    
Sbjct: 207 EEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTL 266

Query: 158 -------------------------------FTILVNSLCKSGRLKEALEVLDQMGRIGC 186
                                          F IL+ +  K+  L +A+    +M + G 
Sbjct: 267 LHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGF 326

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN+ TY  ++  LC  GRVE+A      + ++GL PD+ T+T+++ G C +G   +  +
Sbjct: 327 SPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEK 386

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L  E I RG+ PN +  NT+ +  CKEG  ++       +      PD +SY+ L++G  
Sbjct: 387 LSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYC 446

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  ++ +   MV  G   D    ++LL G C         ++DA  ++ +M  K  
Sbjct: 447 LDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGR-----VDDALALYREMFSKDV 501

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL- 425
             +  TY I++  L    +   A       ++ G      T+N V+  LC    +D+AL 
Sbjct: 502 KPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALR 561

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   L  +  ++  RT ++++I  L ++ +  DA +L+ A L  G++P
Sbjct: 562 MFQGLRSKEFQLEVRT-FNIMIVGLLKVGRIGDAKSLFSAILPSGLVP 608



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 187/411 (45%), Gaps = 23/411 (5%)

Query: 79  DGTNW--SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           DG N   +V  +N ++  L    E + A   F E    G  PN  T++ +I   C     
Sbjct: 131 DGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAM 190

Query: 137 FEARKVIDCMFD----------------NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +A  V+  MFD                 G  P+V T+++L++  CK GR  EA  + D 
Sbjct: 191 DKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDS 250

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G  P+  TY  LL G    G + + +++L  +  DG+  + + +  ++  + K   
Sbjct: 251 MVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNET 310

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++AM    E  ++G +PNVVT+ T+ +  CK G     V     M      PD I++++
Sbjct: 311 LDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTS 370

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL   G+ +    +  EM+  G   +   +N+++  LC    +E  +LE A+  F++
Sbjct: 371 LIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLC----KEGRVLE-AHDFFDQ 425

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           +       D  +Y I+I       K DE++  L   + +G  P  +T++ ++   C  G+
Sbjct: 426 IIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGR 485

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           +D AL L   M+     P+  +Y++++  L    +   A   Y   +  G+
Sbjct: 486 VDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGI 536


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 201/421 (47%), Gaps = 6/421 (1%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           A   V   +A  L+  + +   ++K G   ++   N  +  LVM N+ E A++F      
Sbjct: 175 AHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQL 234

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
            G+ PN  T++ +I+ YC+      A ++I  M   G  P+  ++  ++  LC+  R+KE
Sbjct: 235 VGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKE 294

Query: 174 ALEVLDQMGRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
              ++++M +     P+  TYN L+  L   G  +EA E L   +  G + D   Y+A++
Sbjct: 295 VRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIV 354

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           + FC  GR + A E++NE I +G +P+VVT+  + NG CK G   +   +L+ M K  C 
Sbjct: 355 NSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCK 414

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+ +SY+ LLNGL + G    A    +EM+    E D    N++   + M     +  L 
Sbjct: 415 PNTVSYTALLNGLCQHGNSLEA----REMMNTS-EEDWWTPNAITYSVVMHGLRREGKLS 469

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +A  V  +M  K     P    ++I++L   +K +EA   +   +  G     + F  VI
Sbjct: 470 EACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVI 529

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
              C    ID AL LL  MY + K P   ++  +I  L +  +  +A       LK+G+ 
Sbjct: 530 HGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLD 589

Query: 473 P 473
           P
Sbjct: 590 P 590



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 170/363 (46%), Gaps = 42/363 (11%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L      + A++F  E    G   +   +S ++  +C +     A+++++ M 
Sbjct: 315 YNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMI 374

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V T+T +VN LCK G+++EA ++L QM + GCKPN  +Y  LL GLC  G   
Sbjct: 375 TKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSL 434

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA EM+   + D   P+  TY+ VM G  + G+ +EA +++ E + +G  P  V  N L 
Sbjct: 435 EAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLI 494

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              C E    +    ++    R C  + ++++T+++G  +   I  A+S           
Sbjct: 495 KSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALS----------- 543

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                                 LL+D Y     +  K    D  T+  +I  LGK  + +
Sbjct: 544 ----------------------LLDDMY-----LNNKHP--DAVTFTAIIDALGKKGRIE 574

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA ++    ++ G  P  +T+  VI   C  G++++ + LL  M   +K   RT+Y+ +I
Sbjct: 575 EATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSK--CRTAYNQVI 632

Query: 448 TKL 450
            KL
Sbjct: 633 EKL 635



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 159/318 (50%), Gaps = 6/318 (1%)

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
            F  ++ S  ++G+L+ A++VL  M + G +PN+   N  +  L    ++E+A   L  +
Sbjct: 173 AFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERM 232

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           +  G+ P+V TY  ++ G+C + +   AMEL+ E   +G  P+ V++ T+    C++   
Sbjct: 233 QLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRI 292

Query: 277 MKGVGLLKLMKKRNCL-PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
            +   L++ M K N L PD+++Y+TL++ L K G    A+   +E    GF+VD+   ++
Sbjct: 293 KEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSA 352

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           ++   CM+       ++ A ++  +M  K    D  TY  V+  L K  K +EA   L  
Sbjct: 353 IVNSFCMQG-----RMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQ 407

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
             + G  P T+++  ++  LC  G   +A  ++    E    P+  +Y +++  L +  K
Sbjct: 408 MYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGK 467

Query: 456 SYDACALYGAALKQGVIP 473
             +AC +    L +G  P
Sbjct: 468 LSEACDVVREMLTKGFFP 485



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 148/335 (44%), Gaps = 44/335 (13%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I + +   G +  V  +  ++  L  + + E A K   +   +G  PN+ +++ ++   
Sbjct: 368 EIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGL 427

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +  EAR++++   ++ + PN  T++++++ L + G+L EA +V+ +M   G  P  
Sbjct: 428 CQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTP 487

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL----------------------------- 221
              N L+K LC   ++ EA + +    N G                              
Sbjct: 488 VEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDD 547

Query: 222 ------KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
                  PD  T+TA++D   K GR  EA     + +++G+ P  VT+  + + YCK G 
Sbjct: 548 MYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGR 607

Query: 276 PMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
             + + LL K++ +  C   + +Y+ ++  L  +G    A  +   ++R    +D    +
Sbjct: 608 VEELIKLLGKMLSRSKC---RTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCH 664

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            L     M+S+  K +   AY+V  +M  +  + D
Sbjct: 665 ML-----MESYLSKGIPLSAYKVACRMFDRNLIPD 694



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 4/265 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   L E  D+   +   G   +  + N L+ +L +  +   A KF  E  + G A N+ 
Sbjct: 464 REGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAV 523

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  +C  ++   A  ++D M+ N  HP+  TFT ++++L K GR++EA     +M
Sbjct: 524 NFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKM 583

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT-YTAVMDGFCKVGR 240
            + G  P   TY  ++   C +GRVEE  ++L  + +   +    T Y  V++  C  G 
Sbjct: 584 LKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLS---RSKCRTAYNQVIEKLCNFGN 640

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A +++   +      +  T + L   Y  +G P+    +   M  RN +PD      
Sbjct: 641 PEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDLKLCEK 700

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFG 325
           L   L+  GK+  A ++  + V+ G
Sbjct: 701 LSKKLVLEGKLEEADNLMLQFVQRG 725


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 193/417 (46%), Gaps = 30/417 (7%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+  F  +L +LV  N     V    +    G+A N  T SI+I C+        +  V 
Sbjct: 68  SIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVF 127

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   GY P+  T T L+  LC  G + +AL   D++  +G + N  +Y  L+ GLC V
Sbjct: 128 SNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKV 187

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G+ + A EML  +    ++ DV  Y  ++DG CK    N+A +  +E + + + P VVT+
Sbjct: 188 GQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTY 247

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           NTL  G C  G     +GLL  M   N  P   ++S L++   K GK++ A ++F  M++
Sbjct: 248 NTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMK 307

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEK------------------------------DLLED 353
              + +    NSL+ G C+ +   K                               ++++
Sbjct: 308 KDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDE 367

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A ++FE+M  K    D  TY  +I  L K  +   AL  +    + G  P  IT+N+++ 
Sbjct: 368 AMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLD 427

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           ALC    +DKA+ LL  + +H   PS  +Y++LI  L +  +  DA  ++   L  G
Sbjct: 428 ALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNG 484



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 145/262 (55%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +N L+  L ++ + + A+    +     + P  +TFSI++  +C +    EA+ V 
Sbjct: 243 TVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVF 302

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M      PN+ T+  L+N  C    + +A  + + M +IG  P++ +Y+ ++ G C +
Sbjct: 303 VVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKI 362

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
             V+EA ++   +    + PDV TY +++DG CK GR + A++L+ E  +RG  PN++T+
Sbjct: 363 KMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITY 422

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N+L +  CK     K + LL  +K  N  P   +Y+ L+NGL K G+++ A  +F++++ 
Sbjct: 423 NSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLV 482

Query: 324 FGFEVDERMMNSLLRGLCMKSW 345
            G+ +D    N++++G C K +
Sbjct: 483 NGYNIDVYTYNTMIKGFCKKGF 504



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 144/279 (51%), Gaps = 5/279 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A  F+SE  +  + P   T++ +I   C      +A  ++  M     +P V TF+ILV+
Sbjct: 228 AFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVD 287

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           + CK G++KEA  V   M +   KPNI TYN L+ G C V  V +A  +   +   G+ P
Sbjct: 288 AFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAP 347

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV++Y+ ++ GFCK+   +EAM+L  E   + + P+VVT+N+L +G CK G     + L+
Sbjct: 348 DVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLI 407

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M  R   P+ I+Y++LL+ L K   +  A+ +  ++     +      N L+ GLC  
Sbjct: 408 GEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLC-- 465

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
              +   L+DA +VFE +       D  TY  +I+   K
Sbjct: 466 ---KSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 123/228 (53%), Gaps = 1/228 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        VD   K   +KE  ++F  + K     ++  +N L+    ++NE   A  
Sbjct: 276 NPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAES 335

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F+  +  G+AP+  ++SIMI  +C      EA K+ + M      P+V T+  L++ LC
Sbjct: 336 IFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLC 395

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSGR+  AL+++ +M   G  PNI TYN LL  LC    V++A E+L  +K+  ++P V 
Sbjct: 396 KSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVC 455

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
           TY  +++G CK GR  +A ++  + +  G   +V T+NT+  G+CK+G
Sbjct: 456 TYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 186/429 (43%), Gaps = 75/429 (17%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA+     + +   ++ +G   ++   + L+     L     +   FS     G  P++
Sbjct: 80  VKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDA 139

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T + +I+  C K D  +A    D +   G+  N  ++  L+N LCK G+ K ALE+L +
Sbjct: 140 ITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRR 199

Query: 181 M-GRIG--------------CK--------------------PNIQTYNCLLKGLCYVGR 205
           + G++               CK                    P + TYN L+ GLC +G+
Sbjct: 200 IDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQ 259

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +++A  +L  +  + + P VYT++ ++D FCK G+  EA  +    +++ V PN+VT+N+
Sbjct: 260 LKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNS 319

Query: 266 LFNGYCKEG---------TPMKGVGL-----------------------LKLMKKRNC-- 291
           L NGYC              M  +G+                       +KL ++ +C  
Sbjct: 320 LMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQ 379

Query: 292 -LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             PD ++Y++L++GL K G+I  A+ +  EM   G   +    NSLL  LC     +K  
Sbjct: 380 IFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDK-- 437

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
              A ++  K+          TY I+I  L K  +  +A       +  G+     T+N 
Sbjct: 438 ---AIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNT 494

Query: 411 VIQALCGEG 419
           +I+  C +G
Sbjct: 495 MIKGFCKKG 503



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 154/379 (40%), Gaps = 82/379 (21%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  F  ++ SL K+      + +  QM   G   N+ T + L+     +G    ++ +
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
             N+   G +PD  T T ++ G C  G  ++A+   ++ +  G   N V++ TL NG CK
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 273 EGTPMKGVGLLK------------------------------------LMKKRNCLPDKI 296
            G     + +L+                                    ++ KR C P  +
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRIC-PTVV 245

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMV---------RFGFEVDE---------------RM 332
           +Y+TL+ GL   G+++ A+ +  +M+          F   VD                 M
Sbjct: 246 TYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVM 305

Query: 333 M-----------NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           M           NSL+ G C+ +   K     A  +F  M +     D  +Y I+I    
Sbjct: 306 MKKDVKPNIVTYNSLMNGYCLVNEVNK-----AESIFNTMAQIGVAPDVHSYSIMISGFC 360

Query: 382 KGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
           K K  DEA+  L   +    I P  +T+N++I  LC  G+I  AL L+  M++  + P+ 
Sbjct: 361 KIKMVDEAM-KLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNI 419

Query: 441 TSYDMLITKLDQLEKSYDA 459
            +Y+ L   LD L K++  
Sbjct: 420 ITYNSL---LDALCKNHHV 435



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 133/286 (46%), Gaps = 5/286 (1%)

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+I  +  +L  L           +   ++ +G+  ++ T + +++ F ++G ++ +  +
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +  +++G  P+ +T  TL  G C +G   K +     +       +++SY TL+NGL K
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G+ + A+ + + +      +D  M N+++ G+C     +  L+ DA+  + +M  K   
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVC-----KDKLVNDAFDFYSEMVAKRIC 241

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
               TY  +I  L    +  +A+  LH  I     P   TF+ ++ A C EGK+ +A  +
Sbjct: 242 PTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNV 301

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +M +    P+  +Y+ L+     + +   A +++    + GV P
Sbjct: 302 FVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAP 347



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 72/145 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F+ +        V  +N L+  L        A+K   E    G  PN  
Sbjct: 361 KIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNII 420

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C  +   +A +++  + D+   P+V T+ IL+N LCKSGRLK+A +V + +
Sbjct: 421 TYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDV 480

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRV 206
              G   ++ TYN ++KG C  G V
Sbjct: 481 LVNGYNIDVYTYNTMIKGFCKKGFV 505



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/251 (19%), Positives = 101/251 (40%), Gaps = 30/251 (11%)

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           ++  TP+++ F  +     K       V L + M+      + ++ S L+N   + G   
Sbjct: 62  QKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNS 121

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL---------------------- 350
            + S+F  +++ G+E D   + +L++GLC+K    K L                      
Sbjct: 122 LSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLI 181

Query: 351 --------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
                    + A ++  ++  K+   D   Y  +I  + K K  ++A       +     
Sbjct: 182 NGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRIC 241

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P  +T+N +I  LC  G++  A+ LL  M      P+  ++ +L+    +  K  +A  +
Sbjct: 242 PTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNV 301

Query: 463 YGAALKQGVIP 473
           +   +K+ V P
Sbjct: 302 FVVMMKKDVKP 312


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 186/363 (51%), Gaps = 13/363 (3%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND---FFEARKVIDCMFDNGYHPN 154
           LN+ E A++   +  ++G++PN  T++ ++  YC +      ++A   +  M  N   PN
Sbjct: 216 LNKAEDAIE---DMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPN 272

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
             TF  L++  CK   +  A +  ++M + G KPNI TYN L+ GLC  G++EEA ++  
Sbjct: 273 EVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWD 332

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +   GLKP++ TY A+++GFCK     EA ++ ++  ++ + PNV+TFNT+ + YCKEG
Sbjct: 333 KMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEG 392

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              +G  L   M     LP+  +Y+ L+ GL +   ++ A  +  EM   G + D    N
Sbjct: 393 MMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYN 452

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            L+ GLC     + D   +A ++  +M       +  TY  ++       K   AL    
Sbjct: 453 ILIDGLC-----KNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRT 507

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
              +    P  +T+N +I+  C   K++ A  LL  M E    P+RT+YD  I +L+ LE
Sbjct: 508 RMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYD--IVRLEMLE 565

Query: 455 KSY 457
           K +
Sbjct: 566 KGF 568



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 215/475 (45%), Gaps = 45/475 (9%)

Query: 45  LKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDF--NDLLMALVMLNEQE 102
           L  + R  + + F+D    +       +F S+  DG     +    + L++A V   E  
Sbjct: 88  LANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELH 147

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
            A + F+ A  YG   +  + + ++     +N   +   V   M     H N+ TF I +
Sbjct: 148 CAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFI 207

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY-------EMLMN 215
           N LC++G+L +A + ++ M   G  PN+ TYN L+ G C  G   + Y       EML N
Sbjct: 208 NGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLAN 267

Query: 216 -------------------------------VKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
                                          ++  GLKP++ TY ++++G C  G+  EA
Sbjct: 268 KICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEA 327

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           ++L ++ +  G+ PN+VT+N L NG+CK+    +   +   + K+  +P+ I+++T+++ 
Sbjct: 328 IDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDA 387

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             K G +    S+   M+  G   +    N L+ GLC      K  L+ A ++  +M  K
Sbjct: 388 YCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLC-----RKQDLQAAKELLNEMENK 442

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY I+I  L K  K+  A   L+    +G  P  +T+N ++   C EGK+  A
Sbjct: 443 GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAA 502

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           L +   M +  K P+  +Y++LI    ++ K   A  L    L++G+ P R   D
Sbjct: 503 LNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYD 557



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 175/353 (49%), Gaps = 8/353 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALV---MLNEQETAVKFFSEASSYGLAP 118
           +A  L +  D  + +K  G + +V  +N L+          +   A  F  E  +  + P
Sbjct: 212 RAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICP 271

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N  TF+ +I  +C   +   A+K  + M   G  PN+ T+  L+N LC +G+L+EA+++ 
Sbjct: 272 NEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLW 331

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D+M  +G KPNI TYN L+ G C    ++EA ++  +V    L P+V T+  ++D +CK 
Sbjct: 332 DKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKE 391

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G   E   L +  ++ G+ PNV T+N L  G C++        LL  M+ +    D ++Y
Sbjct: 392 GMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTY 451

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + L++GL K  K R A  +  EM   G + +    N+L+ G CM+       L+ A  V 
Sbjct: 452 NILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGK-----LKAALNVR 506

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
            +M K+    +  TY ++I+   K  K + A   L+  +E G  P   T++ V
Sbjct: 507 TRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 124/244 (50%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E ID++D +   G   ++  +N L+         + A K F + S   L PN  TF+ 
Sbjct: 324 LEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNT 383

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI  YC +    E   +   M D G  PNV+T+  L+  LC+   L+ A E+L++M   G
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            K ++ TYN L+ GLC   +   A ++L  + N GLKP+  TY  +MDG+C  G+   A+
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAAL 503

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +     +    PNVVT+N L  GYCK        GLL  M ++   P++ +Y  +   +
Sbjct: 504 NVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEM 563

Query: 306 LKWG 309
           L+ G
Sbjct: 564 LEKG 567


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 192/389 (49%), Gaps = 5/389 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V   N L+ A     + + A+      ++ GL P   T++ +++  C    F +A++V  
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR 251

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M      P+V +F IL+   C+ G +KEA++   +M      P++ +++CL+      G
Sbjct: 252 TMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRG 311

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            ++ A   L  +K  GL PD   YT V+ GFC+ G  +EA+ + +E +  G  P+VVT+N
Sbjct: 312 EMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYN 371

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL NG CK+   +    LL  M++R   PD  +++TL++G  + G    A+ +F  ++R 
Sbjct: 372 TLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ 431

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
               D    NSL+ G+C K       L  A ++++ M  +  + +  TY I+I +  +  
Sbjct: 432 RLRPDVVTYNSLIDGMCRKGD-----LAKANELWDDMHAREILPNHITYSILIDSHCEKG 486

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + ++A   L   ++ G++P   T+N++I+  C  G + K    L  M +    P   +++
Sbjct: 487 QVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFN 546

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            LI    + E  + A  ++    K+ V P
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKEMVRP 575



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 197/407 (48%), Gaps = 7/407 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F ++ +      V  FN L+     + E + AVKF+ E     + P+  +FS +I  +
Sbjct: 248 EVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLF 307

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             + +   A   +  M   G  P+   +T+++   C++G + EAL V D+M   GC P++
Sbjct: 308 SRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDV 367

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN LL GLC   R+ +A ++L  ++  G+ PD+ T+T ++ G+C+ G    A++L + 
Sbjct: 368 VTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDT 427

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + + + P+VVT+N+L +G C++G   K   L   M  R  LP+ I+YS L++   + G+
Sbjct: 428 LLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQ 487

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A     EMV+ G   + R  NS+++G C     +K       Q  +KM +     D 
Sbjct: 488 VEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKK-----GQQFLQKMRQDNVFPDL 542

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLF 429
            T+  +I    K +    A  ++ + +E   + P  +T+N +I     +G +  A  +  
Sbjct: 543 ITFNTLIHGYIKEENMHGAF-NVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFK 601

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            M +    P R +Y  LI        S  A  L+   + +G  P  K
Sbjct: 602 GMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDK 648



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 192/416 (46%), Gaps = 5/416 (1%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           R +A  +   I + DS+   G    +  +N +L  L      + A + F       +AP+
Sbjct: 202 RFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPD 261

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             +F+I+I  +C   +  EA K    M      P+V +F+ L+    + G +  A   L 
Sbjct: 262 VRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLR 321

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M  +G  P+   Y  ++ G C  G + EA  +   +   G  PDV TY  +++G CK  
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQH 381

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R  +A +LLNE  ERGVTP++ TF TL +GYC++G     + L   + ++   PD ++Y+
Sbjct: 382 RLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYN 441

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           +L++G+ + G +  A  ++ +M        E + N +   + + S  EK  +EDA+   +
Sbjct: 442 SLIDGMCRKGDLAKANELWDDM-----HAREILPNHITYSILIDSHCEKGQVEDAFGFLD 496

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M KK ++ +  TY  +I+   +     +    L    +    P  ITFN +I     E 
Sbjct: 497 EMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEE 556

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            +  A  +  +M +    P   +Y+M+I    +     DA  ++      G+ P R
Sbjct: 557 NMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDR 612



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 177/355 (49%), Gaps = 5/355 (1%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N++T +IM+  YC   +F  A  VI  M      P+V T  +L+++  ++G +  A+ ++
Sbjct: 156 NAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D M   G KP I TYN +LKGLC   R ++A E+   +    + PDV ++  ++ GFC+V
Sbjct: 216 DSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRV 275

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G   EA++   E   R VTP+VV+F+ L   + + G        L+ MK    +PD + Y
Sbjct: 276 GEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIY 335

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + ++ G  + G +  A+ +  EMV FG   D    N+LL GLC     ++  L DA ++ 
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLC-----KQHRLLDAEKLL 390

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            +M ++    D  T+  +I    +    + AL      +     P  +T+N++I  +C +
Sbjct: 391 NEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRK 450

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G + KA  L   M+    +P+  +Y +LI    +  +  DA       +K+G +P
Sbjct: 451 GDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLP 505



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 150/303 (49%), Gaps = 5/303 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E + + D +   G    V  +N LL  L   +    A K  +E    G+ P+  
Sbjct: 344 RAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLC 403

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  YC + +F  A ++ D +      P+V T+  L++ +C+ G L +A E+ D M
Sbjct: 404 TFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDM 463

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 PN  TY+ L+   C  G+VE+A+  L  +   G  P++ TY +++ G+C+ G  
Sbjct: 464 HAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNV 523

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +  + L +  +  V P+++TFNTL +GY KE        +  +M+K    PD ++Y+ +
Sbjct: 524 KKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMI 583

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG  + G ++ A  +FK M   G E D     SL+ G       ++     A+Q+ ++M
Sbjct: 584 INGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQ-----AFQLHDEM 638

Query: 362 TKK 364
             +
Sbjct: 639 IHR 641



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 172/366 (46%), Gaps = 5/366 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   +KE +  +  ++       V  F+ L+       E + A  +  E    GL P+  
Sbjct: 274 RVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGV 333

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++++I  +C      EA +V D M   G  P+V T+  L+N LCK  RL +A ++L++M
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEM 393

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ T+  L+ G C  G  E A ++   +    L+PDV TY +++DG C+ G  
Sbjct: 394 EERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDL 453

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A EL ++   R + PN +T++ L + +C++G      G L  M K+  LP+  +Y+++
Sbjct: 454 AKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSI 513

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G  + G ++      ++M +     D    N+L+ G     + +++ +  A+ VF  M
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG-----YIKEENMHGAFNVFNIM 568

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K++   D  TY ++I    +     +A        + G  P   T+ ++I      G  
Sbjct: 569 EKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNS 628

Query: 422 DKALLL 427
            +A  L
Sbjct: 629 KQAFQL 634



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 147/337 (43%), Gaps = 11/337 (3%)

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
           R+++  +  +   P    F +L+ +  +S + +EA E    +            N LL  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAV 131

Query: 200 LCYVG---RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           L   G     +EAY ++++  ++    + YT   ++  +CK    + A  +++E  +R V
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSE---VNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCV 188

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            P+VVT N L +   + G     + L+  M  R   P  ++Y+++L GL K  +   A  
Sbjct: 189 FPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKE 248

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           +F+ M +     D R  N L+ G C         +++A + +++M  +    D  ++  +
Sbjct: 249 VFRTMDQCSVAPDVRSFNILIGGFCRVGE-----VKEAVKFYKEMQHRYVTPDVVSFSCL 303

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I    +  + D A  +L     +G +P  + +  VI   C  G + +AL +   M     
Sbjct: 304 IGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGC 363

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +P   +Y+ L+  L +  +  DA  L     ++GV P
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTP 400



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 107/225 (47%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +FD++ +      V  +N L+  +    +   A + + +  +  + PN  T+SI+I  
Sbjct: 422 LQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDS 481

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C K    +A   +D M   G  PN+ T+  ++   C+SG +K+  + L +M +    P+
Sbjct: 482 HCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD 541

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + T+N L+ G      +  A+ +   ++ + ++PD  TY  +++GF + G   +A  +  
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFK 601

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
              + G+ P+  T+ +L NG+   G   +   L   M  R   PD
Sbjct: 602 GMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/159 (20%), Positives = 70/159 (44%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++     D + K G   ++  +N ++         +   +F  +     + P+  TF+ 
Sbjct: 488 VEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNT 547

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  Y  + +   A  V + M      P+  T+ +++N   + G +++A  V   MG  G
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSG 607

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
            +P+  TY  L+ G    G  ++A+++   + + G  PD
Sbjct: 608 IEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 26/128 (20%), Positives = 59/128 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           ++  +K+       +++D     +  FN L+   +       A   F+      + P++ 
Sbjct: 519 RSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAV 578

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I  +  + +  +A +V   M D+G  P+  T+  L+N    +G  K+A ++ D+M
Sbjct: 579 TYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEM 638

Query: 182 GRIGCKPN 189
              G  P+
Sbjct: 639 IHRGFAPD 646


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 196/411 (47%), Gaps = 18/411 (4%)

Query: 50  RSLQAQRFV-DRIKASPL--KERIDIFDSIKKDGTNWSVSDFNDLLMALVML---NEQET 103
           R L+ +R + DR ++  L   + + +FD +       SV  FN LL  +      +  E 
Sbjct: 11  RCLELERVIADRARSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSEL 70

Query: 104 AVKFF---SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           AV  F   + A S  + P+  T+SI+  C+C              +   G+  N      
Sbjct: 71  AVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQ 130

Query: 161 LVNSLCKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           L+N LC + R+ EA+++L  +M   GC PN+ + N LLKGLC   RVEEA E+L  +  D
Sbjct: 131 LLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAED 190

Query: 220 G---LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           G     P+V TY  ++DG CK    + A  +L   I++GV  +VVT++T+ +G CK    
Sbjct: 191 GGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAV 250

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            +  G+L+ M  +   PD ++Y+T+++GL K   +  A  + + M+  G + D    N++
Sbjct: 251 DRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI 310

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           + GLC     +   ++ A  V + M  K    D  TY  +I       +  E +  L   
Sbjct: 311 IDGLC-----KAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEM 365

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              G  P  +T++ ++  LC  GK  +A  + + M      P+ T Y +L+
Sbjct: 366 YARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILL 416



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 199/422 (47%), Gaps = 34/422 (8%)

Query: 63  ASPLKERIDIF-DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAP 118
           A  + E +DI    + + G   +V   N LL  L      E A++     +  G     P
Sbjct: 138 AKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTP 197

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N  T++ +I   C       A  V+  M D G   +V T++ +++ LCK+  +  A  VL
Sbjct: 198 NVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVL 257

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
             M   G KP++ TYN ++ GLC    V+ A  +L ++ + G+KPDV TY  ++DG CK 
Sbjct: 258 QHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKA 317

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
              + A  +L   I++ V P++ T+N L +GY   G   + V  L+ M  R   PD ++Y
Sbjct: 318 QAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTY 377

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG------------------- 339
           S LL+ L K GK   A  IF  M+R G + +  +   LL G                   
Sbjct: 378 SLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVA 437

Query: 340 -----------LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                      + + ++ +K ++++A  +F +M++     D  TYGI+I  L K  + D+
Sbjct: 438 NGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDD 497

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A++  +  I  G  P ++ FN+++  LC   + +KA  L F M++    P+   ++ ++ 
Sbjct: 498 AVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMC 557

Query: 449 KL 450
            L
Sbjct: 558 NL 559



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 189/404 (46%), Gaps = 9/404 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF  + + G   +V+ +  LL                    + G++PN++ F+I++  Y 
Sbjct: 396 IFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYA 455

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            K    EA  +   M  +G  P+V T+ IL+++LCK GR+ +A+   +QM   G  PN  
Sbjct: 456 KKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSV 515

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            +N L+ GLC V R E+A E+   + + G++P+V  +  +M   C  G+   A  L++  
Sbjct: 516 VFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM 575

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              GV PNV+++NTL  G+C  G   +   LL +M      PD ISY TLL G  K G+I
Sbjct: 576 ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRI 635

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +F+EM+R G        +++L+GL            +A +++  M K     D  
Sbjct: 636 DNAYCLFREMLRKGVTPGAVTYSTILQGL-----FHTRRFSEAKELYLNMIKSGQQWDIY 690

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY I++  L K    DEA             P  ITF  +I  L   G+   A+ L   +
Sbjct: 691 TYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASI 750

Query: 432 YEHAKIPSRTSYDMLITKLDQ--LEKSYDACALYGAALKQGVIP 473
             H  +P+  +Y +++  + Q  L   +D   L+ A  K G  P
Sbjct: 751 PSHGLVPNVVTYCIMMKNIIQEGLLDEFD--NLFLAMEKSGCTP 792



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 192/380 (50%), Gaps = 5/380 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+ D +  +G + +   FN +L A       + A+  FS  S +GL+P+  T+ I+I   
Sbjct: 430 DLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDAL 489

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A    + M ++G  PN   F  LV  LC   R ++A E+  +M   G +PN+
Sbjct: 490 CKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNV 549

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             +N ++  LC  G+V  A  ++ +++  G++P+V +Y  ++ G C  GR++EA +LL+ 
Sbjct: 550 VFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDV 609

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G+ P++++++TL  GYCK G       L + M ++   P  ++YST+L GL    +
Sbjct: 610 MVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRR 669

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
              A  ++  M++ G + D    N +L GLC     + + +++A+++F+ +  K    + 
Sbjct: 670 FSEAKELYLNMIKSGQQWDIYTYNIILNGLC-----KTNCVDEAFKIFQSLCSKDLRPNI 724

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            T+ I+I  L KG +  +A+         G +P  +T+  +++ +  EG +D+   L   
Sbjct: 725 ITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLA 784

Query: 431 MYEHAKIPSRTSYDMLITKL 450
           M +    P     + +I  L
Sbjct: 785 MEKSGCTPDSVMLNAIIRSL 804



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 193/424 (45%), Gaps = 40/424 (9%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  +N L+   +   E +  V+   E  + GL P+  T+S+++   C      EARK+  
Sbjct: 339 IQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFY 398

Query: 145 CMFDNGYHPNVTTFTILVNS--------------------------------LC---KSG 169
           CM   G  PNVT + IL++                                 LC   K  
Sbjct: 399 CMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKA 458

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
            + EA+ +  +M + G  P++ TY  L+  LC +GRV++A      + NDG+ P+   + 
Sbjct: 459 MIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFN 518

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           +++ G C V R  +A EL  E  ++GV PNVV FNT+    C EG  M    L+  M++ 
Sbjct: 519 SLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERV 578

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P+ ISY+TL+ G    G+   A  +   MV  G + D    ++LLRG C     +  
Sbjct: 579 GVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC-----KTG 633

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            +++AY +F +M +K       TY  +++ L   ++  EA     + I+ G      T+N
Sbjct: 634 RIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYN 693

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            ++  LC    +D+A  +   +      P+  ++ ++I  L +  +  DA  L+ +    
Sbjct: 694 IILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSH 753

Query: 470 GVIP 473
           G++P
Sbjct: 754 GLVP 757



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 186/448 (41%), Gaps = 42/448 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +     +   +   G    V  ++ ++  L      + A          G+ P+  
Sbjct: 211 KAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 270

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C       A  V+  M D G  P+V T+  +++ LCK+  +  A  VL  M
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM 330

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                KP+IQTYNCL+ G    G  +E    L  +   GL PDV TY+ ++D  CK G+ 
Sbjct: 331 IDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKC 390

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL---------------- 285
            EA ++    I +G+ PNV  +  L +GY   G       LL L                
Sbjct: 391 TEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIV 450

Query: 286 -------------------MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
                              M +    PD ++Y  L++ L K G++  AV  F +M+  G 
Sbjct: 451 LCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV 510

Query: 327 EVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
             +  + NSL+ GLC +  WE+      A ++F +M  +    +   +  ++  L    +
Sbjct: 511 TPNSVVFNSLVYGLCTVDRWEK------AEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQ 564

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
              A   +     +G  P  I++N +I   C  G+ D+A  LL +M      P   SYD 
Sbjct: 565 VMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDT 624

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           L+    +  +  +A  L+   L++GV P
Sbjct: 625 LLRGYCKTGRIDNAYCLFREMLRKGVTP 652



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 129/269 (47%), Gaps = 1/269 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + DS+++ G   +V  +N L+    +    + A +      S GL P+  ++  ++R YC
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A  +   M   G  P   T++ ++  L  + R  EA E+   M + G + +I 
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIY 690

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN +L GLC    V+EA+++  ++ +  L+P++ T+T ++D   K GR  +AM+L    
Sbjct: 691 TYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASI 750

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              G+ PNVVT+  +     +EG   +   L   M+K  C PD +  + ++  LL  G+I
Sbjct: 751 PSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEI 810

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
             A +   ++    F + E    SLL  L
Sbjct: 811 MRAGAYLSKIDEMNFSL-EASTTSLLISL 838



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 101/228 (44%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A    E   + D +   G    +  ++ LL         + A   F E    G+ P + T
Sbjct: 597 AGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVT 656

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           +S +++   +   F EA+++   M  +G   ++ T+ I++N LCK+  + EA ++   + 
Sbjct: 657 YSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLC 716

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
               +PNI T+  ++  L   GR ++A ++  ++ + GL P+V TY  +M    + G  +
Sbjct: 717 SKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLD 776

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           E   L     + G TP+ V  N +       G  M+    L  + + N
Sbjct: 777 EFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMN 824



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 4/209 (1%)

Query: 69  RID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           RID    +F  + + G       ++ +L  L        A + +      G   + +T++
Sbjct: 634 RIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYN 693

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           I++   C  N   EA K+   +      PN+ TFTI+++ L K GR K+A+++   +   
Sbjct: 694 IILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSH 753

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  PN+ TY  ++K +   G ++E   + + ++  G  PD     A++      G    A
Sbjct: 754 GLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRA 813

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKE 273
              L++  E   +    T + L + + +E
Sbjct: 814 GAYLSKIDEMNFSLEASTTSLLISLFSRE 842



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 77/182 (42%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
             E  +++ ++ K G  W +  +N +L  L   N  + A K F    S  L PN  TF+I
Sbjct: 670 FSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTI 729

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI          +A  +   +  +G  PNV T+ I++ ++ + G L E   +   M + G
Sbjct: 730 MIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG 789

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P+    N +++ L   G +  A   L  +       +  T + ++  F +    N A 
Sbjct: 790 CTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAK 849

Query: 246 EL 247
            L
Sbjct: 850 SL 851


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 200/408 (49%), Gaps = 7/408 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     ++ DG    V  +N L+  L        A K F   +  GL P+  T+  +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTL 342

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG HP+   F IL+ +  K  ++ EA+ V  +M + G 
Sbjct: 343 LQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN+ TY  ++  LC  G V++A      + ++GL P++  YT+++   C   + ++A E
Sbjct: 403 NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEE 462

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E ++RG+  N + FN++ + +CKEG  ++   L  LM +    P+ I+YSTL++G  
Sbjct: 463 LILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYC 522

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A  +   M   G + D    N+L+ G C  S      ++DA  +F++M     
Sbjct: 523 LAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR-----MDDALALFKEMVSSGV 577

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             +  TY I+++ L   ++T  A        + G      T+N ++  LC     D+AL 
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637

Query: 427 LLF-LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   L     ++ +RT ++++I  L ++ ++ +A  L+ A    G++P
Sbjct: 638 MFQNLCLTDLQLETRT-FNIMIGALLKVGRNDEAKDLFAALSANGLVP 684



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 197/442 (44%), Gaps = 48/442 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +F+ + + G   S+   N  L A V  +    AV  ++  +  G   + P   T+ I+I 
Sbjct: 37  VFEELLRRGRGASIYGLNRAL-ADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIG 95

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
           C C           +  +   G+     TFT L+  LC   R  +A++ VL +M  + C 
Sbjct: 96  CCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCM 155

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---GLKPDVYTYTAVMDGFCKVGRS--- 241
           P++ +   LLKGLC   R +EA E+L  + +D   G  PDV +YT V++GF K G S   
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215

Query: 242 --------------------------------NEAMELLNEAIERGVTPNVVTFNTLFNG 269
                                           ++AME+L   ++ GV PN +T+N++ +G
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YC    P + +G LK M+     PD ++Y++L++ L K G+   A  IF  M + G E D
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                +LL+G     +  K  L + + + + M +     D   + I+I    K +K DEA
Sbjct: 336 IATYCTLLQG-----YATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           ++      + G  P  +T+  VI  LC  G +D A+L    M +    P+   Y  LI  
Sbjct: 391 MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450

Query: 450 LDQLEKSYDACALYGAALKQGV 471
           L   +K   A  L    L +G+
Sbjct: 451 LCIFDKWDKAEELILEMLDRGI 472



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 187/394 (47%), Gaps = 40/394 (10%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G AP+  +++ +I  +  + D  +A      M D    P+V T++ ++ +LCK   + +A
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           +EVL  M + G  PN  TYN +L G C   + +EA   L  +++DG++PDV TY ++MD 
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK GRS EA ++ +   +RG+ P++ T+ TL  GY  +G  ++   LL LM +    PD
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPD 370

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
              ++ L+    K  K+  A+ +F +M + G   +     +++  LC KS      ++DA
Sbjct: 371 HHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC-KSGS----VDDA 425

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA---------------------LIHL 393
              FE+M  +    +   Y  +I +L    K D+A                     +IH 
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485

Query: 394 H--------------HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           H                + +G  P  IT++ +I   C  GK+D+A  LL  M+     P 
Sbjct: 486 HCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPD 545

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y+ LI    ++ +  DA AL+   +  GV P
Sbjct: 546 CVTYNTLINGYCRVSRMDDALALFKEMVSSGVSP 579



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 188/384 (48%), Gaps = 10/384 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F  +++ G N +V  +  ++  L      + A+ +F +    GL PN  
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C  + + +A ++I  M D G   N   F  +++S CK GR+ E+ ++ D M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            RIG KPN+ TY+ L+ G C  G+++EA ++L ++ + G+KPD  TY  +++G+C+V R 
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A+ L  E +  GV+PN++T+N +  G            L   + K     +  +Y+ +
Sbjct: 563 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNII 622

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLEDAYQVFE 359
           L+GL K      A+ +F+ +     +++ R  N ++  L    ++ E KDL       F 
Sbjct: 623 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL-------FA 675

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            ++    V D  TY ++   L +    +E         E G    +   N++++ L   G
Sbjct: 676 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 735

Query: 420 KIDKALLLLFLMYE-HAKIPSRTS 442
            I +A   L ++ E H  + + T+
Sbjct: 736 DITRAGTYLSMIDEKHFSLEASTA 759



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 174/355 (49%), Gaps = 5/355 (1%)

Query: 65  PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
            L E   + D + ++G +     FN L+ A     + + A+  FS+   +GL PN  T+ 
Sbjct: 351 ALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYG 410

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +I   C      +A    + M D G  PN+  +T L++SLC   +  +A E++ +M   
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR 470

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G   N   +N ++   C  GRV E+ ++   +   G+KP+V TY+ ++DG+C  G+ +EA
Sbjct: 471 GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEA 530

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            +LL+     G+ P+ VT+NTL NGYC+       + L K M      P+ I+Y+ +L G
Sbjct: 531 TKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 590

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L    +   A  ++  + + G +++    N +L GLC     + +L ++A ++F+ +   
Sbjct: 591 LFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLC-----KNNLTDEALRMFQNLCLT 645

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
               +  T+ I+I  L K  + DEA          G +P   T++ + + L  +G
Sbjct: 646 DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 700



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 157/376 (41%), Gaps = 80/376 (21%)

Query: 174 ALEVLDQMGRIGC---KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           A+   ++M R G     P + TY  L+   C  GR++  +  L NV   G + +  T+T 
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 231 VMDGFCKVGRSNEAMELL-----------------------------NEAIE-------- 253
           ++ G C   R+++AM+++                              EA+E        
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD 187

Query: 254 --RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              G  P+VV++ T+ NG+ KEG   K       M  R   PD ++YS+++  L K   +
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------------MKS-WEEKDLL----- 351
             A+ +   MV+ G   +    NS+L G C              M+S   E D++     
Sbjct: 248 DKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSL 307

Query: 352 ----------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-- 399
                      +A ++F+ MTK+    D  TY     TL +G  T  AL+ +H  +++  
Sbjct: 308 MDYLCKNGRSTEARKIFDSMTKRGLEPDIATYC----TLLQGYATKGALVEMHALLDLMV 363

Query: 400 --GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             G  P    FN +I A   + K+D+A+L+   M +H   P+  +Y  +I  L +     
Sbjct: 364 RNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD 423

Query: 458 DACALYGAALKQGVIP 473
           DA   +   + +G+ P
Sbjct: 424 DAMLYFEQMIDEGLTP 439


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 193/403 (47%), Gaps = 7/403 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + K+G + +   ++ L+  L      + A+    E    G+ P  +T+++ I   C
Sbjct: 255 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA +++  M   G  PNV T+T L++ L + G+L+ A+ +  +M + G  PN  
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+  LC  GR   A ++   ++  G   +  TY  ++ G C  G   +AM L  + 
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           ++ G  P VVT+NTL NGY  +G       LL LMK+  C PD+ +Y+ L++G  KWGK+
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED-AYQVFEKMTKKVSVTDP 370
             A   F+EMV  G   +     +L+ G        KD   D A  + ++M +     + 
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDG------HSKDGKVDIALSLLKRMEEMGCNPNV 548

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            +Y  VI  L K  +  EA       +E G +P  IT+  +I  LC  G+   A  +   
Sbjct: 549 ESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD 608

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M +   +P+  +Y  LI  L Q  K+ +A  L     ++G+ P
Sbjct: 609 MEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAP 651



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 186/377 (49%), Gaps = 5/377 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +KK G   +V  +  L+  L  L + E A+  + +    GL PN+ T++ +I   C    
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           F  A K+   M  +G   N  T+  ++  LC  G +++A+ + ++M ++G  P + TYN 
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G    G V  A  +L  +K +G +PD +TY  ++ GF K G+   A     E +E G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           + PN V++  L +G+ K+G     + LLK M++  C P+  SY+ ++NGL K  +   A 
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            I  +MV  G   +     +L+ GLC     +      A+++F  M K+  + +  TY  
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF-----AFKIFHDMEKRKCLPNLYTYSS 623

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I  L +  K DEA I L      G  P  +TF ++I      G+ID A LLL  M +  
Sbjct: 624 LIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMG 683

Query: 436 KIPSRTSYDMLITKLDQ 452
             P+  +Y +L+  L +
Sbjct: 684 CKPNYRTYSVLLKGLQK 700



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 205/447 (45%), Gaps = 34/447 (7%)

Query: 61  IKASPLKERI----DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           IKA   +E I    D  + I   G  +S+   N LL+ L      E A   + +  + G+
Sbjct: 135 IKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGI 194

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P+  TF+ +I     K    EA  ++  +F     P+V T+T L+   C++  L  A  
Sbjct: 195 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 254

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           V D+M + GC PN  TY+ L+ GLC  GRV+EA +ML  +   G++P VYTYT  +   C
Sbjct: 255 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
            +    EA+EL+    +RG  PNV T+  L +G  + G     +GL   M K   +P+ +
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL------ 350
           +Y+ L+N L   G+   A+ IF  M   G   + +  N +++GLC+    EK +      
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 351 ------------------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
                                   + +A ++ + M +     D  TY  ++    K  K 
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           + A  +    +E G  P  +++  +I     +GK+D AL LL  M E    P+  SY+ +
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I  L +  +  +A  +    ++QG++P
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLP 581



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 160/313 (51%), Gaps = 5/313 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + IF  ++  G+  +   +N+++  L +  + E A+  F +    G  P   T++ +I  
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           Y  K +   A +++D M +NG  P+  T+  LV+   K G+L+ A     +M   G  PN
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             +Y  L+ G    G+V+ A  +L  ++  G  P+V +Y AV++G  K  R +EA ++ +
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           + +E+G+ PNV+T+ TL +G C+ G       +   M+KR CLP+  +YS+L+ GL + G
Sbjct: 573 KMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 632

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K   A  + KEM R G   DE    SL+ G  +        ++ A+ +  +M       +
Sbjct: 633 KADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGR-----IDHAFLLLRRMVDMGCKPN 687

Query: 370 PGTYGIVIRTLGK 382
             TY ++++ L K
Sbjct: 688 YRTYSVLLKGLQK 700



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 172/350 (49%), Gaps = 5/350 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+  I ++  + K+G   +   +N L+  L +     TA+K F     +G   N+ T++ 
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+  C   D  +A  + + M   G  P V T+  L+N     G +  A  +LD M   G
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C+P+  TYN L+ G    G++E A      +   GL P+  +YTA++DG  K G+ + A+
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL    E G  PNV ++N + NG  KE    +   +   M ++  LP+ I+Y+TL++GL
Sbjct: 534 SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G+ + A  IF +M +     +    +SL+ GLC     ++   ++A  + ++M +K 
Sbjct: 594 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC-----QEGKADEAEILLKEMERKG 648

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
              D  T+  +I       + D A + L   ++MG  P   T++ +++ L
Sbjct: 649 LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGL 698



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 179/393 (45%), Gaps = 40/393 (10%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
            AP      +MI+   N+ +       ++ +   G+  ++ +   L+  L K   ++ A 
Sbjct: 124 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 183

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA----- 230
            +  QM   G +P++ T+N L+  L   G+V EA  +L  +    L PDV+TYT+     
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 243

Query: 231 ------------------------------VMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
                                         +++G C  GR +EA+++L E IE+G+ P V
Sbjct: 244 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTV 303

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            T+       C      + + L+  MKKR C P+  +Y+ L++GL + GK+  A+ ++ +
Sbjct: 304 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHK 363

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M++ G   +    N+L+  LC+           A ++F  M    S+ +  TY  +I+ L
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGR-----FSTALKIFHWMEGHGSLANTQTYNEIIKGL 418

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
             G   ++A++     ++MG +P  +T+N +I     +G ++ A  LL LM E+   P  
Sbjct: 419 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 478

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +Y+ L++   +  K   A   +   ++ G+ P
Sbjct: 479 WTYNELVSGFSKWGKLESASFYFQEMVECGLNP 511



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 96/172 (55%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A+         G  PN  +++ +I     +N F EA K+ D M + G  PNV T+T L
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ LC++GR + A ++   M +  C PN+ TY+ L+ GLC  G+ +EA  +L  ++  GL
Sbjct: 590 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 649

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
            PD  T+T+++DGF  +GR + A  LL   ++ G  PN  T++ L  G  KE
Sbjct: 650 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKE 701



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K +   E   I D + + G   +V  +  L+  L      + A K F +       PN +
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I   C +    EA  ++  M   G  P+  TFT L++     GR+  A  +L +M
Sbjct: 620 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 679

Query: 182 GRIGCKPNIQTYNCLLKGL 200
             +GCKPN +TY+ LLKGL
Sbjct: 680 VDMGCKPNYRTYSVLLKGL 698


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 206/433 (47%), Gaps = 41/433 (9%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   ++  ++ L+   V L + E A       S  G++ N  T++++I+ YC +    EA
Sbjct: 256 GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEA 315

Query: 140 RKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
            KV+  M +     P+   + +L++  C++G++ +A+ +LD+M R+G K N+   N L+ 
Sbjct: 316 EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLIN 375

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           G C  G + EA  ++  + +  LKPD Y+Y  ++DG+C+ G ++EA  L ++ ++ G+ P
Sbjct: 376 GYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEP 435

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
            V+T+NTL  G C+ G     + +  LM K    PD++ YSTLL+GL K      A +++
Sbjct: 436 TVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLW 495

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           K+++  GF       N+++ GLC     +   + +A ++F+KM       D  TY  +I 
Sbjct: 496 KDILARGFTKSRITFNTMISGLC-----KMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550

Query: 379 TLGKGKKTDEAL--------------IHLHHAI------------------EM---GHIP 403
              K     +A               I +++++                  EM   G  P
Sbjct: 551 GYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTP 610

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             +T+  +I   C EG +DKA    F M E+    +      +++ L +L +  +A  L 
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM 670

Query: 464 GAALKQGVIPQRK 476
              +  G  P  +
Sbjct: 671 QKMVDHGFFPDHE 683



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 193/409 (47%), Gaps = 6/409 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K  + +FD++ K G   S+   N LL  LV   E  TA   + +    G+ P+ +  SIM
Sbjct: 173 KNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIM 232

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  +C      EA   +  M + G  PN+ T+  L+N     G ++ A  VL  M   G 
Sbjct: 233 VNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGV 292

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAM 245
             N+ TY  L+KG C   +++EA ++L  ++ +  L PD   Y  ++DG+C+ G+ ++A+
Sbjct: 293 SRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAV 352

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL+E +  G+  N+   N+L NGYCK G   +  G++  M   N  PD  SY+TLL+G 
Sbjct: 353 RLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGY 412

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G    A ++  +M++ G E      N+LL+GLC          +DA Q++  M K  
Sbjct: 413 CREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC-----RVGAFDDALQIWHLMMKXG 467

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D   Y  ++  L K +  + A       +  G     ITFN +I  LC  GK+ +A 
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            +   M +    P   +Y  LI    +      A  + GA  ++ + P 
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPS 576



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 197/434 (45%), Gaps = 27/434 (6%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  ++ D + ++G   +V  +N LL  L  +   + A++ +      G+AP+   +S ++
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLL 479

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                  +F  A  +   +   G+  +  TF  +++ LCK G++ EA E+ D+M  +GC 
Sbjct: 480 DGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 539

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TY  L+ G C    V +A+++   ++ + + P +  Y +++ G  K  R  E  +L
Sbjct: 540 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDL 599

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L E   RG+TPN+VT+  L +G+CKEG   K       M +     + I  ST+++GL +
Sbjct: 600 LTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYR 659

Query: 308 WGKIRPAVSIFKEMVRFGFEVDER---------------------------MMNSLLRGL 340
            G+I  A  + ++MV  GF  D                             + N+++  +
Sbjct: 660 LGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNI 719

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            +    +   ++DA + F  ++ K  V D  TY  +I         DEA       +  G
Sbjct: 720 AIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRG 779

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
            +P  +T+N +I  LC    +D+A  L   +++    P+  +Y+ LI    ++     A 
Sbjct: 780 LVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAF 839

Query: 461 ALYGAALKQGVIPQ 474
            L    +++G+ P 
Sbjct: 840 KLKDKMIEEGISPS 853



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 177/363 (48%), Gaps = 8/363 (2%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           +  +P    F ++++ Y  K     A  V D M   G  P++ +   L+N+L K+G    
Sbjct: 152 FAFSPT--VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 209

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A  V  QM R+G  P++   + ++   C  G+V+EA   +  ++N G++P++ TY ++++
Sbjct: 210 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 269

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL- 292
           G+  +G    A  +L    E+GV+ NVVT+  L  GYCK+    +   +L+ M++   L 
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 329

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD+ +Y  L++G  + GKI  AV +  EM+R G + +  + NSL+ G C     ++  + 
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYC-----KRGEIH 384

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +A  V  +M       D  +Y  ++    +   T EA       ++ G  P  +T+N ++
Sbjct: 385 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 444

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           + LC  G  D AL +  LM +    P    Y  L+  L ++E    A  L+   L +G  
Sbjct: 445 KGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFT 504

Query: 473 PQR 475
             R
Sbjct: 505 KSR 507



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 188/442 (42%), Gaps = 37/442 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +     + + I+  + K G       ++ LL  L  +   E A   + +  + G   +  
Sbjct: 449 RVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI 508

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ MI   C      EA ++ D M D G  P+  T+  L++  CK+  + +A +V   M
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R    P+I+ YN L+ GL    R+ E  ++L  +   GL P++ TY A++DG+CK G  
Sbjct: 569 EREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK-------------- 287
           ++A     E  E G++ N++  +T+ +G  + G   +   L++ M               
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 688

Query: 288 ------------------KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
                             K   LP+ I Y+  + GL K GK+  A   F  +   GF  D
Sbjct: 689 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                +L+ G     +     +++A+++ ++M ++  V +  TY  +I  L K +  D A
Sbjct: 749 NFTYCTLIHG-----YSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 803

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
               H   + G  P  +T+N +I   C  G +D A  L   M E    PS  +Y  LI  
Sbjct: 804 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALING 863

Query: 450 LDQLEKSYDACALYGAALKQGV 471
           L +      +  L    +K GV
Sbjct: 864 LCKHGDIERSMKLLNQMIKAGV 885



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 180/439 (41%), Gaps = 72/439 (16%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + AV+   E    GL  N +  + +I  YC + +  EA  VI  M D    P+  ++  L
Sbjct: 349 DDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 408

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++  C+ G   EA  + D+M + G +P + TYN LLKGLC VG  ++A ++   +   G+
Sbjct: 409 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGV 468

Query: 222 KPDVYTYTAVMDGF-----------------------------------CKVGRSNEAME 246
            PD   Y+ ++DG                                    CK+G+  EA E
Sbjct: 469 APDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 528

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           + ++  + G +P+ +T+ TL +GYCK     +   +   M++    P    Y++L++GL 
Sbjct: 529 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLF 588

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K  ++     +  EM   G   +     +L+ G     W ++ +L+ A+  + +MT+   
Sbjct: 589 KSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDG-----WCKEGMLDKAFSSYFEMTENGL 643

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH------------------------- 401
             +      ++  L +  + DEA + +   ++ G                          
Sbjct: 644 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 703

Query: 402 -------IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
                  +P  I +N  I  LC  GK+D A     ++     +P   +Y  LI       
Sbjct: 704 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763

Query: 455 KSYDACALYGAALKQGVIP 473
              +A  L    L++G++P
Sbjct: 764 NVDEAFRLRDEMLRRGLVP 782



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 105/200 (52%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E+    L PN+  ++I I   C      +AR+    +   G+ P+  T+  L++    
Sbjct: 702 LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSA 761

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G + EA  + D+M R G  PNI TYN L+ GLC    V+ A  +   +   GL P+V T
Sbjct: 762 AGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVT 821

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++DG+CK+G  + A +L ++ IE G++P+VVT++ L NG CK G   + + LL  M 
Sbjct: 822 YNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMI 881

Query: 288 KRNCLPDKISYSTLLNGLLK 307
           K       I Y TL+ G  K
Sbjct: 882 KAGVDSKLIEYCTLVQGGFK 901



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 101/182 (55%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N  +  L    + + A +FFS  S  G  P+++T+  +I  Y    +  EA ++ D M 
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PN+ T+  L+N LCKS  +  A  +  ++ + G  PN+ TYN L+ G C +G ++
Sbjct: 777 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 836

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A+++   +  +G+ P V TY+A+++G CK G    +M+LLN+ I+ GV   ++ + TL 
Sbjct: 837 AAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLV 896

Query: 268 NG 269
            G
Sbjct: 897 QG 898



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 156/366 (42%), Gaps = 72/366 (19%)

Query: 44  DLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQE 102
           DL  +P  +  +  +D   KAS + +   +  +++++  + S+  +N L+  L       
Sbjct: 535 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLV 594

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNK-------NDFFE------ARKVIDC---- 145
                 +E    GL PN  T+  +I  +C +       + +FE      +  +I C    
Sbjct: 595 EXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMV 654

Query: 146 ------------------MFDNGYHP--------------------------------NV 155
                             M D+G+ P                                N 
Sbjct: 655 SGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNN 714

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
             + I +  LCK+G++ +A      +   G  P+  TY  L+ G    G V+EA+ +   
Sbjct: 715 IVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 774

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +   GL P++ TY A+++G CK    + A  L ++  ++G+ PNVVT+NTL +GYCK G 
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN- 334
                 L   M +    P  ++YS L+NGL K G I  ++ +  +M++ G  VD +++  
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAG--VDSKLIEY 892

Query: 335 -SLLRG 339
            +L++G
Sbjct: 893 CTLVQG 898



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/405 (21%), Positives = 165/405 (40%), Gaps = 62/405 (15%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  I   G   S   FN ++  L  + +   A + F +    G +P+  T+  +I  YC
Sbjct: 494 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYC 553

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             ++  +A KV   M      P++  +  L++ L KS RL E  ++L +MG  G  PNI 
Sbjct: 554 KASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIV 613

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+ G C  G +++A+     +  +GL  ++   + ++ G  ++GR +EA  L+ + 
Sbjct: 614 TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM 673

Query: 252 IERG--------------------------------VTPNVVTFNTLFNGYCKEGTPMKG 279
           ++ G                                + PN + +N    G CK G     
Sbjct: 674 VDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDA 733

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
                ++  +  +PD  +Y TL++G    G +  A  +  EM+R G   +    N+L+ G
Sbjct: 734 RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALING 793

Query: 340 LC-----------MKSWEEKDL-------------------LEDAYQVFEKMTKKVSVTD 369
           LC                +K L                   ++ A+++ +KM ++     
Sbjct: 794 LCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 853

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
             TY  +I  L K    + ++  L+  I+ G   + I +  ++Q 
Sbjct: 854 VVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 69/142 (48%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A +   E    GL PN  T++ +I   C   +   A+++   +   G  PNV T+  L
Sbjct: 766 DEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTL 825

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++  CK G +  A ++ D+M   G  P++ TY+ L+ GLC  G +E + ++L  +   G+
Sbjct: 826 IDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885

Query: 222 KPDVYTYTAVMDGFCKVGRSNE 243
              +  Y  ++ G  K    NE
Sbjct: 886 DSKLIEYCTLVQGGFKTSNYNE 907


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 153/278 (55%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S + E   +F +++  G   ++  +N ++     +   + A++ + E    GL PN  TF
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTF 301

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
            I+I   C  ++   ARK +  M   G  PN+  +  L++  CK+G L EAL +  ++ +
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P++ TY+ L+KGLC V R+EEA  +L  +K  G  P+  TY  ++DG+CK G   +
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A+E+ ++  E+G+ PN++TF+TL +GYCK G     +GL   M  +  LPD ++Y+ L++
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           G  K G  + A  + KEM   G   +   ++ L+ GLC
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 183/393 (46%), Gaps = 52/393 (13%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + +     +V  +  L+  L   +    A   F    + G+ PN +T++ M+  YC
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A ++   M  +G  PNV TF IL++ LCK+  +  A + L  M   G  PNI 
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            YNCL+ G C  G + EA  +   ++   + PDV+TY+ ++ G C V R  EA  LL E 
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            ++G  PN VT+NTL +GYCKEG   K + +   M ++   P+ I++STL++G  K GK+
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ ++ EMV              ++GL                          + D  
Sbjct: 455 EAAMGLYTEMV--------------IKGL--------------------------LPDVV 474

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAI-EMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            Y  +I    K   T EA   LH  + E G  P   T + +I  LC +G+I  A+ L   
Sbjct: 475 AYTALIDGHFKDGNTKEAF-RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL- 532

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKS-YDACAL 462
                   ++T  D   +K ++L++S Y  C+L
Sbjct: 533 --------AKTGTDTTGSKTNELDRSLYQMCSL 557



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 153/279 (54%), Gaps = 2/279 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + +K+ ++++  +  DG   +V  F  L+  L   +E  +A KF  + +S+G+ PN +
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  YC   +  EA  +   +  +   P+V T++IL+  LC   R++EA  +L +M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  PN  TYN L+ G C  G +E+A E+   +   G++P++ T++ ++DG+CK G+ 
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             AM L  E + +G+ P+VV +  L +G+ K+G   +   L K M++    P+  + S L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           ++GL K G+I  A+ +F  + + G +      N L R L
Sbjct: 515 IDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSL 551



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 149/321 (46%), Gaps = 5/321 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +    ++++ L K GR     +V   M   G  PN+ TY  L+ G C  G   +A+ +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +    + P V  YT ++ G C   R +EA  +       G+ PN+ T+NT+ +GYCK
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                K + L + M     LP+ +++  L++GL K  ++  A     +M  FG   +  +
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+ G C     +   L +A  +  ++ K   + D  TY I+I+ L    + +EA   
Sbjct: 336 YNCLIDGYC-----KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L    + G +P  +T+N +I   C EG ++KA+ +   M E    P+  ++  LI    +
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 453 LEKSYDACALYGAALKQGVIP 473
             K   A  LY   + +G++P
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLP 471



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 10/217 (4%)

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
           TPNV  F  L   + + G   +    L +  K + LP   + + +L+GL+K G+      
Sbjct: 125 TPNV--FGVLIIAFSEMGLVEEA---LWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWK 179

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           ++ +MV  G   +     +L+ G C     + D L+ A+++F++M +K        Y I+
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCC----RQGDFLK-AFRLFDEMIEKKIFPTVVIYTIL 234

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           IR L    +  EA          G +P   T+N ++   C    + KAL L   M     
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGL 294

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +P+  ++ +LI  L + ++   A          GV+P
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 113/296 (38%), Gaps = 46/296 (15%)

Query: 18  RNHNKIPQFNKLVVFAAASLSTAESLD-----LKENPRSLQAQRFVDRIKASPLKERIDI 72
             H K P+ N+ +     S +T++ L      L++NP S+ +   +  +KA  LK  +  
Sbjct: 590 HTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVE 649

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK----FFSEASSYGLAPNSWTFSIMIR 128
              +     N+       L  +L+ +      V      F E  S  L   SWT   +I 
Sbjct: 650 GKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLI--SWTS--VIS 705

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL----------------- 171
            Y +     +A ++   M  +   P++ T T+ +++    G L                 
Sbjct: 706 AYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDT 765

Query: 172 -----KEALEVLDQMGRIGCK-------PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
                   + +  + G IG         PN  T+  +L    + G VEE  +   ++K D
Sbjct: 766 DLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKED 825

Query: 220 -GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
             L+P +  +  ++D  C+ G   EA E +   ++  V PN V + TL      +G
Sbjct: 826 YSLRPRISHFGCMVDLLCRAGLLTEAYEFI---LKMPVRPNAVVWRTLLGACSLQG 878


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 186/386 (48%), Gaps = 6/386 (1%)

Query: 62  KASPLKERIDIFDSIKKDGT-NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           KA      +D+F  +K++G+   +   F+ L++ L  ++    A+  F E    GL  + 
Sbjct: 23  KAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLQADV 82

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
              + +I C C      +AR+++  M  + +  +V T++ L+++L K+GR  +ALEV   
Sbjct: 83  NVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSN 142

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + GC P+   YN L+  L   G+V+EA E+L ++   G+ PD  TY  V+D     GR
Sbjct: 143 MQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGR 202

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A         R  +P+VVT+NTL NG  K     +   L   M+   C+PD  ++ T
Sbjct: 203 YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGT 262

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++ L K G++  A+     +V+ G   +  + N+L+ G C     +K      Y++F+ 
Sbjct: 263 LIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDK-----GYELFQD 317

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +     D  TY I++    +   T  A+  L   +  GH P   T+N +I++L   G+
Sbjct: 318 MIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQ 377

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDML 446
           ++ A  L   M      P   +Y  L
Sbjct: 378 VEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 171/358 (47%), Gaps = 6/358 (1%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY-HPNVTTFTILVNSLCKSGRLKEAL 175
           AP+   ++ +I  YC   D   A  +   +   G   PN  +F  LV  LCK  R  +AL
Sbjct: 8   APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 67

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            V  +M   G + ++   N L+   C +G + +A  +L ++       DV+TY+ +MD  
Sbjct: 68  AVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDAL 127

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
            K GR+ +A+E+ +   + G  P+ V +N L +   K+G   + + LL+ M ++  +PD 
Sbjct: 128 GKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDC 187

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
            +Y+ +++ L   G+   A S F  M R     D    N+LL GL  K     D   +A 
Sbjct: 188 RTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGL--KKLRRTD---EAC 242

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            +F++M     + D  T+G +I TL K  + ++AL      ++MGH+P +  +N +I   
Sbjct: 243 DLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGF 302

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           C  G++DK   L   M E +  P   +Y +L+    +   +  A  L    +++G  P
Sbjct: 303 CRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTP 360



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 117/242 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +++ + + + G       +N ++  L      E A  FF        +P+  
Sbjct: 164 KQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVV 223

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++          EA  + D M  N   P++TTF  L+++L K+GR+++ALE   ++
Sbjct: 224 TYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARL 283

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            ++G  PN   YN L+ G C  G+V++ YE+  ++      PD  TYT ++ GF + G +
Sbjct: 284 VKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHT 343

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + AMELL E +  G TP + T+N L       G       L K M  +   PD  +YS L
Sbjct: 344 SMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403

Query: 302 LN 303
            N
Sbjct: 404 PN 405



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 41/211 (19%)

Query: 290 NCLPDKISYSTLLNGLLKWG------------------------------------KIRP 313
           +C PD ++Y+TL+ G  K G                                    +   
Sbjct: 6   DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 65

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A+++F+EM+  G + D  + N+L+   C        +L  A ++   MT    V D  TY
Sbjct: 66  ALAVFQEMLGAGLQADVNVCNTLIHCTC-----RLGMLRQARRLLHHMTAHAFVLDVFTY 120

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             ++  LGK  +  +AL    +  + G +P T+ +N +I  L  +GK+D+AL LL  M  
Sbjct: 121 SYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNR 180

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
              +P   +Y+++I  L    +   A + +G
Sbjct: 181 KGIMPDCRTYNIVIDVLSSCGRYEKAYSFFG 211


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 171/320 (53%), Gaps = 5/320 (1%)

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C ++ + +A K++D M D G  P++ T+ ++VN +C+ GR+ +A+E L  +   GC+PN 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +YN +LKGLC   R E+A E++  +   G  P+V T+  ++   C+ G    A+E+L +
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             + G TPN +++N L + +CK+    K +  L LM  R C PD +SY+TLL  L + G+
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  AV +  ++   G        N+++ GL  K+ + K+ LE    +  +M  K    D 
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGL-TKAGKTKEALE----LLNEMVSKGLQPDI 237

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +   L +  + ++A+       +MG  P T+ +N +I  LC   +   A+ L   
Sbjct: 238 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 297

Query: 431 MYEHAKIPSRTSYDMLITKL 450
           M  +  +P+ ++Y +LI  L
Sbjct: 298 MIGNGCMPNESTYTILIEGL 317



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 177/354 (50%), Gaps = 5/354 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S  K+ + + D ++  G    +  +N ++  +      + A++F     SYG  PN+ 
Sbjct: 4   KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 63

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I+++  C    + +A +++  M   G  PNV TF +L++ LC+ G ++ ALEVL+Q+
Sbjct: 64  SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 123

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC PN  +YN LL   C   ++++A   L  + + G  PD+ +Y  ++   C+ G  
Sbjct: 124 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 183

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ELL++  ++G  P ++++NT+ +G  K G   + + LL  M  +   PD I+YST+
Sbjct: 184 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 243

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
             GL +  +I  A+  F ++   G   +  + N+++ GLC +          A  +F  M
Sbjct: 244 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS-----AIDLFAYM 298

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
                + +  TY I+I  L       EA   L      G + +++     I+ L
Sbjct: 299 IGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAIRLL 352



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 162/308 (52%), Gaps = 5/308 (1%)

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK    K+A+++LD+M   GC P+I TYN ++ G+C  GRV++A E L N+ + G +P+ 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            +Y  V+ G C   R  +A EL+ E  ++G  PNVVTFN L +  C++G     + +L+ 
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           + K  C P+ +SY+ LL+   K  K+  A++    MV  G   D    N+LL  LC +S 
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALC-RSG 181

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
           E    +E  +Q+ +K    V ++    Y  VI  L K  KT EAL  L+  +  G  P  
Sbjct: 182 EVDVAVELLHQLKDKGCAPVLIS----YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 237

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           IT++ +   LC E +I+ A+     + +    P+   Y+ +I  L +  +++ A  L+  
Sbjct: 238 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 297

Query: 466 ALKQGVIP 473
            +  G +P
Sbjct: 298 MIGNGCMP 305


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 196/404 (48%), Gaps = 7/404 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  +   G   +V+ +  L+           A K + E +  G+APN+ TF+ +I   C
Sbjct: 457 LFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLC 516

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             N   EA K+ D M +    PN  T+ +L+   C+ G    A E+LD+M + G  P+  
Sbjct: 517 QINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTY 576

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+ GLC  GRV EA E + ++ +   + D   YTA++ GFCK GR  EA+    E 
Sbjct: 577 TYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEM 636

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           + RG+  ++V++  L +G   +   +    LL+ M  +   PD + Y+ L++G +K G +
Sbjct: 637 VGRGLQMDLVSYAVLISGALNQNDRIL-FELLREMHGKGMQPDNVIYTILIDGFIKSGNL 695

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           + A   +  M+  G+  +     +L+ GL    +     + +A  +F++M    ++ +  
Sbjct: 696 KKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGY-----VNEAKLLFKRMLVGEAIPNHI 750

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TYG  +  L K    + AL  LH+A+  G    T+T+N +I+  C  GK  +A  LL +M
Sbjct: 751 TYGCFLDHLTKEGNMENAL-QLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVM 809

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
                +P   +Y   I +  +      A  ++   L++G+ P R
Sbjct: 810 IGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDR 853



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 188/401 (46%), Gaps = 40/401 (9%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V   + LL AL  + +    ++ F    + G+ P+ + ++++++C C   DF +A+++I+
Sbjct: 190 VRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIIN 249

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
               NG   ++ T+ + +N LCKS R+ EA+EV   +G  G K ++ TY  L+ GLC + 
Sbjct: 250 QAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQ 309

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
             E   EM+  +   G  P     + +++G  K+G    A ELLN+  + GV PN+  +N
Sbjct: 310 EFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYN 369

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL------------------- 305
           ++ N  CK G   +   L  +M +R   P+ ++Y+ L++G                    
Sbjct: 370 SMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIEC 429

Query: 306 ----------------LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
                            K+GK++ A  +FKEMV  G +       SL+ G C     +  
Sbjct: 430 GISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYC-----KDG 484

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
           L+  A++++ +MT K    +  T+  +I  L +  K  EA       +E+  +P  +T+N
Sbjct: 485 LVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYN 544

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            +I+  C EG   +A  LL  M +    P   +Y  LI  L
Sbjct: 545 VLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGL 585



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 195/418 (46%), Gaps = 16/418 (3%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK   ++   ++ + + K G   ++  +N ++ +L    + E A   FS  +  GL PN 
Sbjct: 341 IKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPND 400

Query: 121 WTFSIMIRCYCNKND----FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            T++I+I  +  +      F+   K+I+C    G    V ++  ++N  CK G++K A  
Sbjct: 401 VTYTILIDGFGRRAKLDVAFYYFNKMIEC----GISATVYSYNSMINCQCKFGKMKMAEL 456

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +  +M   G KP + TY  L+ G C  G V +A+++   +   G+ P+  T+TA++ G C
Sbjct: 457 LFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLC 516

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           ++ +  EA +L +E +E  + PN VT+N L  G+C+EG   +   LL  M K+   PD  
Sbjct: 517 QINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTY 576

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y  L+ GL   G++  A     ++      +DE    +LL+G C     ++  +++A  
Sbjct: 577 TYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFC-----KEGRIKEALV 631

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE-MGHIPRTITFNNVIQAL 415
             ++M  +    D  +Y ++I   G   + D  L  L   +   G  P  + +  +I   
Sbjct: 632 ARQEMVGRGLQMDLVSYAVLIS--GALNQNDRILFELLREMHGKGMQPDNVIYTILIDGF 689

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              G + KA    ++M     +P+  +Y  L+  L +     +A  L+   L    IP
Sbjct: 690 IKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIP 747



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 180/415 (43%), Gaps = 40/415 (9%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  +   G   +   F  L+  L  +N+   A K F E     + PN  T++++I  +C
Sbjct: 492 LYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHC 551

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            + +   A +++D M   G  P+  T+  L+  LC +GR+ EA E ++ +     + +  
Sbjct: 552 REGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDEL 611

Query: 192 TYNCLLKGLCYVGRVEEA----------------------------------YEMLMNVK 217
            Y  LL+G C  GR++EA                                  +E+L  + 
Sbjct: 612 CYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMH 671

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G++PD   YT ++DGF K G   +A E     I  G  PN VT+  L NG  K G   
Sbjct: 672 GKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVN 731

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   L K M     +P+ I+Y   L+ L K G +  A+ +   M++  F  +    N L+
Sbjct: 732 EAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSF-ANTVTYNILI 790

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
           RG C     +    ++A ++ + M     V D  TY   I    K    D A+      +
Sbjct: 791 RGYC-----QIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECML 845

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           + G  P  + FN +I A C  G++D+AL L   M      P++++Y  L+ +L Q
Sbjct: 846 QRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQ 900



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 190/417 (45%), Gaps = 48/417 (11%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I +  + +G + S+  +N  +  L        AV+        GL  +  T+  ++   
Sbjct: 246 EIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGL 305

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +F    +++D M + GY P+    + L+  L K G ++ A E+L+++G++G  PN+
Sbjct: 306 CRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNL 365

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMDGF-------------- 235
             YN ++  LC  G++EEA E+L +V  + GL P+  TYT ++DGF              
Sbjct: 366 FVYNSMINSLCKTGKLEEA-ELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFN 424

Query: 236 ---------------------CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
                                CK G+   A  L  E +++G+ P V T+ +L +GYCK+G
Sbjct: 425 KMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDG 484

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              K   L   M  +   P+ ++++ L+ GL +  K+  A  +F EMV      +E   N
Sbjct: 485 LVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYN 544

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL---GKGKKTDEALI 391
            L+ G C +    +     A+++ ++M KK    D  TY  +I  L   G+  +  E + 
Sbjct: 545 VLIEGHCREGNTTR-----AFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFIN 599

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
            LHH  +       + +  ++Q  C EG+I +AL+    M          SY +LI+
Sbjct: 600 DLHHKHQR---LDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLIS 653



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 180/403 (44%), Gaps = 6/403 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           + F+S KK   + S S F+ L+   V        V   +    YGL P   T S ++   
Sbjct: 142 NFFESYKKYKFS-SSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNAL 200

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
                F +  ++ D + + G  P+   +T++V  LC+     +A E+++Q    GC  +I
Sbjct: 201 ARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSI 260

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN  + GLC   RV EA E+  ++   GLK D+ TY  ++ G C++      ME+++E
Sbjct: 261 VTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDE 320

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            IE G  P+    + L  G  K G+      LL  + K   +P+   Y++++N L K GK
Sbjct: 321 MIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGK 380

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A  +F  M   G   ++     L+ G     +  +  L+ A+  F KM +       
Sbjct: 381 LEEAELLFSVMAERGLNPNDVTYTILIDG-----FGRRAKLDVAFYYFNKMIECGISATV 435

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            +Y  +I    K  K   A +     ++ G  P   T+ ++I   C +G + KA  L   
Sbjct: 436 YSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHE 495

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M      P+  ++  LI  L Q+ K  +A  L+   ++  ++P
Sbjct: 496 MTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILP 538



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 119/239 (49%), Gaps = 1/239 (0%)

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           +   E    G+ P++  ++I+I  +    +  +A +    M   GY PN  T+T LVN L
Sbjct: 665 ELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGL 724

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
            K+G + EA  +  +M      PN  TY C L  L   G +E A + L N    G   + 
Sbjct: 725 FKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQ-LHNAMLQGSFANT 783

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            TY  ++ G+C++G+  EA +LL+  I  G+ P+ +T++T    YCK G     + + + 
Sbjct: 784 VTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWEC 843

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           M +R   PD++ ++ L++     G++  A+ +  +M+  G +  +   +SL+  L  ++
Sbjct: 844 MLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRA 902



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/405 (22%), Positives = 162/405 (40%), Gaps = 82/405 (20%)

Query: 151 YHPNVTTFTILVNSLCKSG----------------------------------------- 169
           +H +  +F IL++SL ++                                          
Sbjct: 99  FHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGF 158

Query: 170 -----------RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
                      R+ + + V++ M   G  P ++T + LL  L  + +  +  E+   + N
Sbjct: 159 DMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVN 218

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            G+KPD Y YT V+   C++   N+A E++N+A   G + ++VT+N   NG CK     +
Sbjct: 219 AGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWE 278

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            V + + + ++    D ++Y TL+ GL +  +    + +  EM+  G+   E  ++ L+ 
Sbjct: 279 AVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIE 338

Query: 339 GLC-MKSWE-----------------------------EKDLLEDAYQVFEKMTKKVSVT 368
           GL  M S E                             +   LE+A  +F  M ++    
Sbjct: 339 GLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNP 398

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +  TY I+I   G+  K D A  + +  IE G      ++N++I   C  GK+  A LL 
Sbjct: 399 NDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLF 458

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M +    P+  +Y  LI+   +      A  LY     +G+ P
Sbjct: 459 KEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAP 503



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 2/162 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +    F+D + K   ++  + + +++ + G+  +   +N L+     + + + A K 
Sbjct: 747 PNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKL 805

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
                  G+ P+  T+S  I  YC + +   A  + +CM   G  P+   F  L+++ C 
Sbjct: 806 LDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCL 865

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           +G L  AL++ + M   G KP   TY+ L+  L    R+ + 
Sbjct: 866 NGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 194/393 (49%), Gaps = 12/393 (3%)

Query: 85  VSDFNDLLMALVMLNEQ-ETAVKFFSEASSYG-LAPNSWTFSIMIRCYCNKNDFFEARKV 142
           + DFN LL  LV  ++   TA+       S G  + +  T +I I C C+         V
Sbjct: 74  IQDFN-LLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFAV 132

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           +  M   G  P + T   +VN LC  G +  AL ++++M  +G   N +TY  L+ GLC 
Sbjct: 133 LGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCK 192

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           +G    A E L  +    L P+V  Y A++DG CK G   EA+ LL+E     V PNVVT
Sbjct: 193 IGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVT 252

Query: 263 FNTLFNGYCKE-GTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           +N L  G C E G   +GVGL  +++ ++  +PD  ++S L++G  K G +  A S+   
Sbjct: 253 YNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGF 312

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVIR 378
           MVR G E +    NSL+ G C++S      +E+A +VF  M ++     P   T+  +I 
Sbjct: 313 MVRIGVEPNVVTYNSLIAGYCLRSQ-----MEEAMRVFGLMVREGEGCLPSVVTHNSLIH 367

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
              K K+ D+A+  L   +  G  P   T+ ++I   C   K   A  L F M EH ++P
Sbjct: 368 GWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVP 427

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           +  +  +++  L +     +A  L+ A +K G+
Sbjct: 428 NLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGL 460



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 190/417 (45%), Gaps = 42/417 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +   + K G   ++   N ++  L +  +   A+    +  + G   N+ T+  ++   C
Sbjct: 132 VLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLC 191

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              D   A + +  M      PNV  +  +++ LCK G + EAL +L +MG +  +PN+ 
Sbjct: 192 KIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVV 251

Query: 192 TYNCLLKGLC--YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           TYNCL++GLC  + G  E        V   G+ PDV T++ ++DGFCK G    A  ++ 
Sbjct: 252 TYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVG 311

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK--RNCLPDKISYSTLLNGLLK 307
             +  GV PNVVT+N+L  GYC      + + +  LM +    CLP  +++++L++G  K
Sbjct: 312 FMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCK 371

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-------------------------- 341
             ++  A+S+  EMV  G + D     SL+ G C                          
Sbjct: 372 VKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQT 431

Query: 342 --------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
                   +K W    L  +A  +F  M K     D   Y I++  + K  K ++A   L
Sbjct: 432 CAVVLDGLLKCW----LDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLL 487

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              +  G    + T+N +I+ LC EG +D A  LL  M E+   P++ SY++ +  L
Sbjct: 488 SCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGL 544



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 191/376 (50%), Gaps = 9/376 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK-NDFFEARKV 142
           +V  +N +L  L        A+    E     + PN  T++ +I+  C +   + E   +
Sbjct: 214 NVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGL 273

Query: 143 IDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
            + M  + G  P+V TF+ILV+  CK G L  A  V+  M RIG +PN+ TYN L+ G C
Sbjct: 274 FNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYC 333

Query: 202 YVGRVEEAYEM--LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
              ++EEA  +  LM  + +G  P V T+ +++ G+CKV   ++AM LL+E + +G+ P+
Sbjct: 334 LRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPD 393

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           V T+ +L  G+C+   P+    L   MK+   +P+  + + +L+GLLK      AV++F+
Sbjct: 394 VFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFR 453

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            M++ G ++D  + N +L G+C     +   L DA ++   +  K    D  TY I+I+ 
Sbjct: 454 AMMKSGLDLDIVIYNIMLDGMC-----KMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKG 508

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           L +    D+A   L    E G  P   ++N  +Q L  +  I ++   L +M +      
Sbjct: 509 LCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVD 568

Query: 440 RTSYDMLITKLDQLEK 455
            T+ ++LI  L   E+
Sbjct: 569 ATTAELLIRFLSANEE 584



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 5/272 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEA--SSYGLAPNSWTFSIMIRCYCNKNDFF 137
           G   +V  +N L+    + ++ E A++ F        G  P+  T + +I  +C   +  
Sbjct: 317 GVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVD 376

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +A  ++  M   G  P+V T+T L+   C+  +   A E+   M   G  PN+QT   +L
Sbjct: 377 KAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVL 436

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            GL       EA  +   +   GL  D+  Y  ++DG CK+G+ N+A +LL+  + +G+ 
Sbjct: 437 DGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLK 496

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            +  T+N +  G C+EG       LL+ MK+  C P+K SY+  + GLL+   I  +   
Sbjct: 497 IDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKY 556

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
            + M   GF VD      L+R L   S  E+D
Sbjct: 557 LQIMKDKGFPVDATTAELLIRFL---SANEED 585



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 3/118 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + +F ++ K G +  +  +N +L  +  + +   A K  S     GL  +S+T++IMI
Sbjct: 447 EAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMI 506

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS---GRLKEALEVLDQMG 182
           +  C +    +A +++  M +NG  PN  ++ + V  L +     R ++ L+++   G
Sbjct: 507 KGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKG 564


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 190/382 (49%), Gaps = 5/382 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   I   +  DG    V  +  L+ AL    + + A+  F++  S    P+  T+  
Sbjct: 280 IDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVT 339

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  + +     +  K+   M  +GY P+V TFTILVN+LCK+GR+ EA ++LD M + G
Sbjct: 340 LLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQG 399

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ TYN L+ GL    R+++A ++  N+++ G++P  YTY  ++D   K G   +A+
Sbjct: 400 VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKAL 459

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E   +   RG+ PN+V  N       + G   +   +   +K     PD ++Y+ ++   
Sbjct: 460 ETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCY 519

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G++  A+ +  EM +   E D  ++NSL+  L      +   +E+A+Q+F +M +  
Sbjct: 520 SKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTL-----YKAGRVEEAWQMFCRMEEMN 574

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
                 TY I++  LGK  +  +A+         G  P TITFN ++  LC   ++D AL
Sbjct: 575 LAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLAL 634

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
            + + M      P   +++ +I
Sbjct: 635 KMFYKMTTMNCRPDVLTFNTII 656



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 197/407 (48%), Gaps = 5/407 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE ++++  +  +G   S+  F+ L++A       +T +    E  S GL PN +T++I 
Sbjct: 211 KEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTIC 270

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           IR         EA +++  M D+G  P+V T+T+L+++LC + +L +A+ +  +M     
Sbjct: 271 IRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSH 330

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           KP+  TY  LL      G +++  ++   ++ DG  PDV T+T +++  CK GR NEA +
Sbjct: 331 KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFD 390

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           LL+   ++GV PN+ T+NTL +G  +       + L   M+     P   +Y  L++   
Sbjct: 391 LLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHG 450

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G    A+  F++M   G   +    N+ L  L      E   L +A  +F ++     
Sbjct: 451 KSGHPGKALETFEKMKARGIAPNIVACNASLYSLA-----EMGRLGEAKAMFNELKSSGL 505

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY ++++   K  + DEA+  L    ++   P  I  N++I  L   G++++A  
Sbjct: 506 APDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQ 565

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   M E    P+  +Y++L+  L +  +   A  L+ +    G  P
Sbjct: 566 MFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSP 612



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 152/302 (50%), Gaps = 5/302 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E  D+ D+++K G   ++  +N L+  L+  N  + A+  FS   S G+ P ++
Sbjct: 381 KAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAY 440

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ ++I  +       +A +  + M   G  PN+      + SL + GRL EA  + +++
Sbjct: 441 TYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNEL 500

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TYN ++K    VG+V+EA ++L  +     +PDV    +++D   K GR 
Sbjct: 501 KSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRV 560

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA ++     E  + P VVT+N L  G  KEG   K V L + M    C P+ I+++TL
Sbjct: 561 EEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTL 620

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+ L K  ++  A+ +F +M       D    N+++ G       +++ +++A  +F +M
Sbjct: 621 LDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFI-----KQNQIKNAIWLFHQM 675

Query: 362 TK 363
            K
Sbjct: 676 KK 677



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 7/302 (2%)

Query: 71   DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
            ++F+ +K  G       +N L+ A     +       + E  + G  PN+ T++++I   
Sbjct: 811  NLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNL 870

Query: 131  CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
               N   +A  +   +    + P   TF  L++ L KSGRL +A E+ D M   GC+PN 
Sbjct: 871  VKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNS 930

Query: 191  QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
              YN L+ G   +G V+ A E    +  +G++PD+ +YT ++D  C  GR ++A+    +
Sbjct: 931  AIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEK 990

Query: 251  AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
              + G+ P++V +N + NG  +     + + L   M+ R  +PD  +Y++L+  L   G 
Sbjct: 991  LKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGM 1050

Query: 311  IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
            I  A  I++E+   G + +    N+L+RG  +    E      AY +++KM   V   DP
Sbjct: 1051 IEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSEL-----AYGIYKKMM--VGGCDP 1103

Query: 371  GT 372
             T
Sbjct: 1104 NT 1105



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 149/320 (46%), Gaps = 8/320 (2%)

Query: 105  VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
            VKF  E    G+ P    ++++I  +   ++   A  + + M   G  P+  T+  L+++
Sbjct: 778  VKFTKE---LGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDA 834

Query: 165  LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
              KSG++ E  ++ D+M   GCKPN  TYN ++  L    R+++A ++  N+ +    P 
Sbjct: 835  HGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPT 894

Query: 225  VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
              T+  ++DG  K GR ++A E+ +  +  G  PN   +N L NGY K G         K
Sbjct: 895  PCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFK 954

Query: 285  LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
             M K    PD  SY+ L++ L   G++  A+  F+++ + G + D    N ++ GL    
Sbjct: 955  RMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGL---- 1010

Query: 345  WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
                   E+A  +F +M  +  V D  TY  +I  LG     +EA         +G  P 
Sbjct: 1011 -GRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPN 1069

Query: 405  TITFNNVIQALCGEGKIDKA 424
              T+N +I+     G  + A
Sbjct: 1070 VFTYNALIRGYTLSGNSELA 1089



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 151/302 (50%), Gaps = 5/302 (1%)

Query: 77   KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
            K+ G   ++  +N L+   + ++  E A   F E  S G AP+++T++ +I  +      
Sbjct: 782  KELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841

Query: 137  FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
             E   + D M   G  PN  T+ +++++L KS RL +A+++   +      P   T+  L
Sbjct: 842  NELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPL 901

Query: 197  LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
            + GL   GR+++A+EM   + + G +P+   Y  +++G+ K+G  + A E     ++ G+
Sbjct: 902  IDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGI 961

Query: 257  TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
             P++ ++  L +  C  G     +   + +K+    PD ++Y+ ++NGL +  +   A+S
Sbjct: 962  RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021

Query: 317  IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
            +F EM   G   D    NSL+  L +       ++E+A +++E++       +  TY  +
Sbjct: 1022 LFHEMQNRGIVPDLYTYNSLILNLGIVG-----MIEEAGKIYEELQFIGLKPNVFTYNAL 1076

Query: 377  IR 378
            IR
Sbjct: 1077 IR 1078



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 121/243 (49%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            +K++ L + +D++ ++     + +   F  L+  L+     + A + F     YG  PNS
Sbjct: 871  VKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNS 930

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
              ++I++  Y        A +    M   G  P++ ++TILV+ LC +GR+ +AL   ++
Sbjct: 931  AIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEK 990

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            + + G  P++  YN ++ GL    R EEA  +   ++N G+ PD+YTY +++     VG 
Sbjct: 991  LKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGM 1050

Query: 241  SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              EA ++  E    G+ PNV T+N L  GY   G      G+ K M    C P+  +++ 
Sbjct: 1051 IEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQ 1110

Query: 301  LLN 303
            L N
Sbjct: 1111 LPN 1113



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 124/264 (46%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K+  + E  D++D +   G   +   +N ++  LV  N  + A+  +    S   +P   
Sbjct: 837  KSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPC 896

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            TF  +I          +A ++ D M   G  PN   + ILVN   K G +  A E   +M
Sbjct: 897  TFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRM 956

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             + G +P++++Y  L+  LC  GRV++A      +K  GL PD+  Y  +++G  +  R+
Sbjct: 957  VKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRT 1016

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             EA+ L +E   RG+ P++ T+N+L       G   +   + + ++     P+  +Y+ L
Sbjct: 1017 EEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNAL 1076

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFG 325
            + G    G    A  I+K+M+  G
Sbjct: 1077 IRGYTLSGNSELAYGIYKKMMVGG 1100



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/493 (20%), Positives = 207/493 (41%), Gaps = 69/493 (13%)

Query: 49   PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
            P  +     +D + KA  ++E   +F  +++     +V  +N LL  L    + + AV+ 
Sbjct: 542  PDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQL 601

Query: 108  FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            F   + +G +PN+ TF+ ++ C C  ++   A K+   M      P+V TF  +++   K
Sbjct: 602  FESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIK 661

Query: 168  SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA--------YEMLMNVKND 219
              ++K A+ +  QM ++  +P+  T   LL G+   G++E+A        Y++  N+   
Sbjct: 662  QNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRS 720

Query: 220  -------GLKPDVYTYTAVMDG---------------------FCKVGRSNEAMELLNEA 251
                   G+  +  T  A++ G                      CK  +++ A  +  + 
Sbjct: 721  FWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKF 780

Query: 252  I-ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
              E GV P +  +N L +G+ +         L + MK   C PD  +Y++L++   K GK
Sbjct: 781  TKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGK 840

Query: 311  IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-------------------- 350
            I     ++ EM+  G + +    N ++  L   +  +K +                    
Sbjct: 841  INELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGP 900

Query: 351  ----------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
                      L+DA+++F+ M       +   Y I++   GK    D A       ++ G
Sbjct: 901  LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960

Query: 401  HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
              P   ++  ++  LC  G++D AL     + +    P   +Y+++I  L + +++ +A 
Sbjct: 961  IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEAL 1020

Query: 461  ALYGAALKQGVIP 473
            +L+     +G++P
Sbjct: 1021 SLFHEMQNRGIVP 1033



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 139/328 (42%), Gaps = 9/328 (2%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALE----VLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           G  PNV   T   N + +  R+   +E    V D M R   + N+ TY  + K L   G 
Sbjct: 115 GELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGG 174

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           + +A   L  ++  G   + Y+Y  ++    + G   EA+E+    +  G+ P++ TF+ 
Sbjct: 175 LRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSA 234

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L     K       +GLL+ M+     P+  +Y+  +  L + GKI  A  I K M   G
Sbjct: 235 LMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDG 294

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              D      L+  LC         L+DA  +F KM       D  TY  ++        
Sbjct: 295 CGPDVVTYTVLIDALCTARK-----LDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGH 349

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+           G+ P  +TF  ++ ALC  G+I++A  LL  M +   +P+  +Y+ 
Sbjct: 350 LDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNT 409

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           LI+ L +  +  DA  L+      GV P
Sbjct: 410 LISGLLRANRLDDALDLFSNMESLGVEP 437


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 198/402 (49%), Gaps = 8/402 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA--VKFFSEASSYGLAPNSWTFSIMIRC 129
           IFDS+   G    +  ++ +L       +   A     F+   + G+APN   F+I+I  
Sbjct: 296 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 355

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           Y       +A  + + M + G  P+  TF  +++SLC+ GRL +AL   + M  IG  P+
Sbjct: 356 YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 415

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
              Y CL++G C  G + +A E++  + N D   P V  ++++++  CK GR  E  +++
Sbjct: 416 EAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIM 475

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +  ++ G  PNVVTFN+L  GYC  G   +   LL  M      P+   Y TL++G  K 
Sbjct: 476 DMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 535

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G+I  A+++F++M+  G +    + + +L GL      +      A ++F +M +  +  
Sbjct: 536 GRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF-----QARRTTAAKKMFHEMIESGTTV 590

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
              TYG+V+  L +   TDEA + L     M      ITFN VI A+   G+  +A  L 
Sbjct: 591 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 650

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
             +  +  +P+  +Y M+IT L + E   +A  L+ +  K G
Sbjct: 651 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 692



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 188/425 (44%), Gaps = 42/425 (9%)

Query: 87  DFN-DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           DF+  L+   V   E + A   F E    G+ P     + +I+  C   +  +A  ++  
Sbjct: 135 DFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQK 194

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL----- 200
           M D+G  P++ T++++++ LCKS  + +A  VL+QM   G +PN  TYN L+ G      
Sbjct: 195 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGM 254

Query: 201 -------------CYV-----------------GRVEEAYEMLMNVKNDGLKPDVYTYTA 230
                        C V                 GR  EA  +  ++   G KPD+ +Y+ 
Sbjct: 255 WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYST 314

Query: 231 VMDGFCKVGRS--NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           ++ G+     S   +   + N  + +G+ PN   FN L N Y + G   K + + + M+ 
Sbjct: 315 MLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQN 374

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           +  +PD ++++T+++ L + G++  A+  F  MV  G    E +   L++G C       
Sbjct: 375 KGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC----NHG 430

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
           +L++    + E M K +       +  +I  L K  +  E    +   ++ G  P  +TF
Sbjct: 431 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 490

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           N++++  C  G +++A  LL  M      P+   Y  L+    +  +  DA  ++   L 
Sbjct: 491 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLH 550

Query: 469 QGVIP 473
           +GV P
Sbjct: 551 KGVKP 555



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 7/264 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P    FS +I   C +    E + ++D M   G  PNV TF  L+   C  G ++EA  +
Sbjct: 450 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 509

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           LD M  IG +PN   Y  L+ G C  GR+++A  +  ++ + G+KP    Y+ ++ G  +
Sbjct: 510 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 569

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R+  A ++ +E IE G T ++ T+  +  G C+     +   LL+ +   N   D I+
Sbjct: 570 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 629

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEEKDLLEDAYQ 356
           ++ +++ + K G+ + A  +F  +  +G   + +  + ++  L   +S+EE D       
Sbjct: 630 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEAD------N 683

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTL 380
           +F  + K    +D      ++R L
Sbjct: 684 LFISVEKSGHASDSRLLNHIVRML 707



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 109/230 (47%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN  TF+ ++  YC   +  EA  ++D M   G  PN   +  LV+  CK+GR+ +A
Sbjct: 482 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 541

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L V   M   G KP    Y+ +L GL    R   A +M   +   G    ++TY  V+ G
Sbjct: 542 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 601

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            C+   ++EA  LL +     V  +++TFN + +   K G   +   L   +     +P+
Sbjct: 602 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 661

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
             +YS ++  L+K      A ++F  + + G   D R++N ++R L  K+
Sbjct: 662 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 711



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 132/341 (38%), Gaps = 76/341 (22%)

Query: 180 QMGRIGCK----PNIQTYNCLLK----------GLCYVGRV--------EEAYEMLMNVK 217
           +M R  C     P I TYN L+           GL  VGR+        + +Y ++    
Sbjct: 86  RMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV 145

Query: 218 NDG---------------------------------------------------LKPDVY 226
            DG                                                   + PD++
Sbjct: 146 KDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLF 205

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY+ ++DG CK    ++A  +L + +E G  PN +T+N+L +GY   G   + V + K M
Sbjct: 206 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 265

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
                +P   + ++ ++ L K G+   A  IF  MV  G + D    +++L G    +  
Sbjct: 266 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT-- 323

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
               L D + +F  M  K    +   + I+I    +    D+A++        G IP T+
Sbjct: 324 -DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTV 382

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           TF  VI +LC  G++D AL     M +    PS   Y  LI
Sbjct: 383 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLI 423



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 4/246 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  DI D + + G   +V  FN L+    ++   E A       +S G+ PN +
Sbjct: 464 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 523

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  ++  YC      +A  V   M   G  P    ++I+++ L ++ R   A ++  +M
Sbjct: 524 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 583

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +I TY  +L GLC     +EA  +L  +    +K D+ T+  V+    KVGR 
Sbjct: 584 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 643

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA EL +     G+ PN+ T++ +     KE +  +   L   ++K     D    S L
Sbjct: 644 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD----SRL 699

Query: 302 LNGLLK 307
           LN +++
Sbjct: 700 LNHIVR 705



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 8/224 (3%)

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
           A  R   P + T+N L + Y +   P  G+ ++  + K    PD  SYS L+ G +K G+
Sbjct: 91  ACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGE 149

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           +  A  +F EM+  G      + NS+++ LC MK       ++ A  + +KM       D
Sbjct: 150 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKE------MDKAESIVQKMVDSGIAPD 203

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY ++I  L K K  D+A   L   +E G  P +IT+N++I      G  ++++ +  
Sbjct: 204 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 263

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M     IP+  + +  I  L +  ++ +A  ++ + + +G  P
Sbjct: 264 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKP 307


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 165/333 (49%), Gaps = 6/333 (1%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           ++  ++ +I   C       A +++  M  NGY  +V T+T L++ LCKSG L  A  +L
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            +M   GC PN+ TY  L+ GLC   R  +A + +  +   G +PD+ TY +++ G C  
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 239 GRSNEAMELLNE-AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            R ++A  +L E  IE G  P+VVT+NT  +G CK G   KG+ +L+ M +    PD ++
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           + ++++GL K  +I  A  +FK M+  G   D     SL   + + +    + L+   +V
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPD-----SLTYSIMLDNLSRANRLDTVEEV 243

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            E M K        TY  +I  L +    + A      A+E G +    T N  I ALC 
Sbjct: 244 LEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCR 303

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            GK   A  +L  M E   +P+  SY+ +I  L
Sbjct: 304 SGKFPLAKNILLGMIESGSLPNLLSYNFVIDGL 336



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 172/338 (50%), Gaps = 6/338 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L    +   A++     ++ G   +  T++ +I   C   D   A+ ++  M 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  PNV T+T L++ LCK+ R  +A++ + +M R GC+P++ TYN L+ GLC   R++
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 208 EAYEMLMNVK-NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +A  +L  +    G  PDV TY   + G CK G+ ++ +E+L E    G++P+VVTF ++
Sbjct: 133 DAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSI 192

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G CK         + K M +R C+PD ++YS +L+ L +  ++     + + MV+ G 
Sbjct: 193 ISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGH 252

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
                    L+  L +++ +    +E A   +E+  +   V +  T+   I  L +  K 
Sbjct: 253 YALSATYAPLIHAL-IRAGD----IESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKF 307

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             A   L   IE G +P  +++N VI  LC  G +D A
Sbjct: 308 PLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDA 345



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 151/281 (53%), Gaps = 8/281 (2%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M    +  +   +  L+  LCK+ + + ALE+L  M   G   ++ TY  L+ GLC  G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++ A  +L  + + G  P+V TYTA++DG CK  R ++A++ +   +  G  P++VT+N+
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 266 LFNGYCKEGTPMKGVGLL--KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           L +G C     M   GL+  +LM +   +PD ++Y+T ++GL K GK+   + + +EM R
Sbjct: 121 LIHGLCM-ANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDR 179

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D     S++ GLC     + + ++DA+QVF+ M ++  V D  TY I++  L + 
Sbjct: 180 GGISPDVVTFCSIISGLC-----KANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRA 234

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            + D     L H ++ GH   + T+  +I AL   G I+ A
Sbjct: 235 NRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESA 275



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 141/266 (53%), Gaps = 2/266 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L + +++ + + + G +  V  F  ++  L   N  + A + F      G  P+S 
Sbjct: 163 KAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSL 222

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SIM+      N      +V++ M  +G++    T+  L+++L ++G ++ A    +Q 
Sbjct: 223 TYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQA 282

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC   + T+N  +  LC  G+   A  +L+ +   G  P++ +Y  V+DG CK G  
Sbjct: 283 MEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNV 342

Query: 242 NEAMELLNEAIERGVT-PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN-CLPDKISYS 299
           ++A +L  + ++ G   P+V+ FNTL +G+CK G   +   LLK MK +N C+PD ++Y+
Sbjct: 343 DDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYN 402

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFG 325
           T+++G  K+G ++ A  + +EM   G
Sbjct: 403 TMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 153/354 (43%), Gaps = 43/354 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  L     +   +   G   +V  +  L+  L        A++        G  P+  
Sbjct: 57  KSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLV 116

Query: 122 TFSIMIRCYCNKNDFFEARKVI-DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T++ +I   C  N   +A  V+ + M ++G  P+V T+   ++ LCK+G+L + LE+L++
Sbjct: 117 TYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEE 176

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G  P++ T+  ++ GLC   R+++A+++   +   G  PD  TY+ ++D   +  R
Sbjct: 177 MDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANR 236

Query: 241 SNEAMELL-----------------------------------NEAIERGVTPNVVTFNT 265
            +   E+L                                    +A+E G    V T N 
Sbjct: 237 LDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNA 296

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
                C+ G       +L  M +   LP+ +SY+ +++GL K G +  A  + ++M+  G
Sbjct: 297 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 356

Query: 326 -FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM-TKKVSVTDPGTYGIVI 377
             + D    N+L+ G C     +   L  A Q+ ++M  K + V D  TY  +I
Sbjct: 357 CCKPDVIFFNTLISGFC-----KAGRLSQAQQLLKEMKAKNICVPDVVTYNTMI 405



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 6/216 (2%)

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           +   +NTL  G CK   P   + LL +M         ++Y+TL++GL K G +  A ++ 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           ++M   G   +     +L+ GLC           DA Q  ++M +     D  TY  +I 
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPH-----DAIQTVKRMLRSGCEPDLVTYNSLIH 123

Query: 379 TLGKGKKTDEALIHLHH-AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
            L    + D+A + L    IE G IP  +T+N  I  LC  GK+DK L +L  M      
Sbjct: 124 GLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIS 183

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P   ++  +I+ L +  +  DA  ++   L++G +P
Sbjct: 184 PDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVP 219


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 197/402 (49%), Gaps = 8/402 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA--VKFFSEASSYGLAPNSWTFSIMIRC 129
           IFDS+   G    +  ++ +L       +   A     F+   + G+APN   F+I+I  
Sbjct: 372 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 431

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           Y       +A  + + M + G  P+  TF  +++SLC+ GRL +AL   + M  IG  P+
Sbjct: 432 YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 491

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
              Y CL++G C  G + +A E++  + N D   P V  ++++++  CK GR  E  +++
Sbjct: 492 EAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIM 551

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +  ++ G  PNVVTFN+L  GYC  G   +   LL  M      P+   Y TL++G  K 
Sbjct: 552 DMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 611

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G+I  A+++F++M+  G +    + + +L GL             A ++F +M +  +  
Sbjct: 612 GRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA-----AKKMFHEMIESGTTV 666

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
              TYG+V+  L +   TDEA + L     M      ITFN VI A+   G+  +A  L 
Sbjct: 667 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 726

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
             +  +  +P+  +Y M+IT L + E   +A  L+ +  K G
Sbjct: 727 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 768



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 188/425 (44%), Gaps = 42/425 (9%)

Query: 87  DFN-DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           DF+  L+   V   E + A   F E    G+ P     + +I+  C   +  +A  ++  
Sbjct: 211 DFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQK 270

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL----- 200
           M D+G  P++ T++++++ LCKS  + +A  VL+QM   G +PN  TYN L+ G      
Sbjct: 271 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGM 330

Query: 201 -------------CYV-----------------GRVEEAYEMLMNVKNDGLKPDVYTYTA 230
                        C V                 GR  EA  +  ++   G KPD+ +Y+ 
Sbjct: 331 WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYST 390

Query: 231 VMDGFCKVGRS--NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           ++ G+     S   +   + N  + +G+ PN   FN L N Y + G   K + + + M+ 
Sbjct: 391 MLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQN 450

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           +  +PD ++++T+++ L + G++  A+  F  MV  G    E +   L++G C       
Sbjct: 451 KGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC----NHG 506

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
           +L++    + E M K +       +  +I  L K  +  E    +   ++ G  P  +TF
Sbjct: 507 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 566

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           N++++  C  G +++A  LL  M      P+   Y  L+    +  +  DA  ++   L 
Sbjct: 567 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLH 626

Query: 469 QGVIP 473
           +GV P
Sbjct: 627 KGVKP 631



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 7/264 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P    FS +I   C +    E + ++D M   G  PNV TF  L+   C  G ++EA  +
Sbjct: 526 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 585

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           LD M  IG +PN   Y  L+ G C  GR+++A  +  ++ + G+KP    Y+ ++ G  +
Sbjct: 586 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 645

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R+  A ++ +E IE G T ++ T+  +  G C+     +   LL+ +   N   D I+
Sbjct: 646 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 705

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEEKDLLEDAYQ 356
           ++ +++ + K G+ + A  +F  +  +G   + +  + ++  L   +S+EE D       
Sbjct: 706 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEAD------N 759

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTL 380
           +F  + K    +D      ++R L
Sbjct: 760 LFISVEKSGHASDSRLLNHIVRML 783



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 109/230 (47%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN  TF+ ++  YC   +  EA  ++D M   G  PN   +  LV+  CK+GR+ +A
Sbjct: 558 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 617

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L V   M   G KP    Y+ +L GL    R   A +M   +   G    ++TY  V+ G
Sbjct: 618 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 677

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            C+   ++EA  LL +     V  +++TFN + +   K G   +   L   +     +P+
Sbjct: 678 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 737

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
             +YS ++  L+K      A ++F  + + G   D R++N ++R L  K+
Sbjct: 738 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 787



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 136/347 (39%), Gaps = 76/347 (21%)

Query: 174 ALEVLDQMGRIGCK----PNIQTYNCLLK----------GLCYVGRV--------EEAYE 211
           A+E+  +M R  C     P I TYN L+           GL  VGR+        + +Y 
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 212 MLMNVKNDG--------------------------------------------------- 220
           ++     DG                                                   
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + PD++TY+ ++DG CK    ++A  +L + +E G  PN +T+N+L +GY   G   + V
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            + K M     +P   + ++ ++ L K G+   A  IF  MV  G + D    +++L G 
Sbjct: 336 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 395

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
              +      L D + +F  M  K    +   + I+I    +    D+A++        G
Sbjct: 396 ATAT---DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 452

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            IP T+TF  VI +LC  G++D AL     M +    PS   Y  LI
Sbjct: 453 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLI 499



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 4/301 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  DI D + + G   +V  FN L+    ++   E A       +S G+ PN +
Sbjct: 540 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 599

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  ++  YC      +A  V   M   G  P    ++I+++ L ++ R   A ++  +M
Sbjct: 600 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 659

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +I TY  +L GLC     +EA  +L  +    +K D+ T+  V+    KVGR 
Sbjct: 660 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 719

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA EL +     G+ PN+ T++ +     KE +  +   L   ++K     D    + +
Sbjct: 720 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHI 779

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD---LLEDAYQVF 358
           +  LL   ++  A +    +      ++   + SLL  L  +  + ++   LL   YQ F
Sbjct: 780 VRMLLNKAEVAKASNYLSIIGENNLTLEASTI-SLLASLFSREGKYREHIKLLPAKYQFF 838

Query: 359 E 359
           E
Sbjct: 839 E 839



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 8/224 (3%)

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
           A  R   P + T+N L + Y +   P  G+ ++  + K    PD  SYS L+ G +K G+
Sbjct: 167 ACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGE 225

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           +  A  +F EM+  G      + NS+++ LC MK       ++ A  + +KM       D
Sbjct: 226 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKE------MDKAESIVQKMVDSGIAPD 279

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY ++I  L K K  D+A   L   +E G  P +IT+N++I      G  ++++ +  
Sbjct: 280 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 339

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M     IP+  + +  I  L +  ++ +A  ++ + + +G  P
Sbjct: 340 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKP 383


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 187/373 (50%), Gaps = 10/373 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF---FEARKVID 144
           FN ++  L  + +   A     +    G++ N  T++ +I  YC        ++A  ++ 
Sbjct: 166 FNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILK 225

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M  +G  PN  TF IL++  CK   +  A++V  +M R G KPN+ TYN L+ GLC  G
Sbjct: 226 EMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNG 285

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +V EA  +   + N  LKP++ T+ A+++GFCK     +A EL ++  ++G+TPNV T+N
Sbjct: 286 KVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYN 345

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L + YCK+        L ++M  +   PD  +Y+ L+ GL + G +  A ++  EM   
Sbjct: 346 ILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTK 405

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             + D    N L+  LC K   +K     A ++ ++M +K       TY  +I    K  
Sbjct: 406 HLKADLITYNILIDSLCNKGEMKK-----ALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG 460

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
               AL       ++G +    T+N +I+  C + K++ A  LL  M E   IP+R +Y+
Sbjct: 461 NLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYE 520

Query: 445 MLITKLDQLEKSY 457
           ++  ++  +EK +
Sbjct: 521 IVTEEM--MEKGF 531



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 158/309 (51%), Gaps = 5/309 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I   ++ DG   +   FN L+           A+K F+E +  G+ PN  T++ +I   C
Sbjct: 223 ILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLC 282

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N     EA  + D M ++   PN+ T   L+N  CK+  +K+A E+ D M + G  PN+ 
Sbjct: 283 NNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVT 342

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+   C    +E+A+ +   +   G+ PDV TY  ++ G C+ G    A  L++E 
Sbjct: 343 TYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEM 402

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             + +  +++T+N L +  C +G   K + LL  M ++   P +++Y+T+++G  K G +
Sbjct: 403 DTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNL 462

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           R A+++  +M + G   +    N L++G C     +KD LEDA  +  +M +K  + +  
Sbjct: 463 RAALNLRSQMEKVGRLANVATYNVLIKGFC-----KKDKLEDANGLLNEMLEKGLIPNRM 517

Query: 372 TYGIVIRTL 380
           TY IV   +
Sbjct: 518 TYEIVTEEM 526



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 151/316 (47%), Gaps = 8/316 (2%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           E  +++  +  + +  N     ILV +  K+ R +   E   +    G K ++ + N L+
Sbjct: 76  EQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLM 135

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            GL  VG + +   +   +    ++P + ++  V++G CKVG+ N+A +++ +   RGV+
Sbjct: 136 SGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVS 195

Query: 258 PNVVTFNTLFNGYCKE---GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
            NV+T+NTL +GYCK    G   K   +LK M+     P++++++ L++G  K   +  A
Sbjct: 196 ANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAA 255

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           + +F EM R G + +    NSL+ GLC         + +A  + ++M       +  T+ 
Sbjct: 256 MKVFAEMNRQGVKPNVVTYNSLINGLC-----NNGKVNEATALRDQMVNSCLKPNIITHN 310

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            ++    K K   +A        + G  P   T+N +I A C +  ++ A  L  +M   
Sbjct: 311 ALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGK 370

Query: 435 AKIPSRTSYDMLITKL 450
              P  ++Y+ LI  L
Sbjct: 371 GVCPDVSTYNCLIAGL 386



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 106/198 (53%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+  ++FD + K G   +V+ +N L+ A       E A   +      G+ P+  T++ 
Sbjct: 322 VKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNC 381

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C K D   AR ++  M       ++ T+ IL++SLC  G +K+AL +LD+M R G
Sbjct: 382 LIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKG 441

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KP+  TYN ++ G C  G +  A  +   ++  G   +V TY  ++ GFCK  +  +A 
Sbjct: 442 LKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDAN 501

Query: 246 ELLNEAIERGVTPNVVTF 263
            LLNE +E+G+ PN +T+
Sbjct: 502 GLLNEMLEKGLIPNRMTY 519


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 193/409 (47%), Gaps = 11/409 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +F+ + +        +F  +L +LV      T +  F +    G+ PN   F+I+I
Sbjct: 53  DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
            C+C       A  V+  +   GY P+  T    +   C  G++ +AL   D++  +G  
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            +  +Y  L+ GLC VG    A E+L  V    ++ DV  Y+ ++D  CK    N+A +L
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDL 232

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E + R ++ N+VT++ L +G+C  G     +GL   M   N  PD  +++ L++   K
Sbjct: 233 YSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCK 292

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G+++ A +    M++ G + D    NSL+ G C+ +  E ++   A  +   M+ +   
Sbjct: 293 EGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVN--EVNM---AKSILNTMSHRGVT 347

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH---IPRTITFNNVIQALCGEGKIDKA 424
               +Y IVI    K K  D+A+       EM H    P  IT+N++I  LC  G+I  A
Sbjct: 348 ATVRSYNIVINGFCKIKMVDQAMKLFK---EMHHKQIFPNVITYNSLIDGLCKSGRISYA 404

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L L+ LM++  + P   +Y  ++  L +      A AL      QG+ P
Sbjct: 405 LELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRP 453



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 167/325 (51%), Gaps = 5/325 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   +SE  S  ++ N  T+S +I  +C      +A  + + M     +P+V TF ILV+
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 288

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           + CK GR+KEA   L  M + G KP+I TYN L+ G C V  V  A  +L  + + G+  
Sbjct: 289 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTA 348

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            V +Y  V++GFCK+   ++AM+L  E   + + PNV+T+N+L +G CK G     + L+
Sbjct: 349 TVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELI 408

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            LM  R   PD I+YS++L+ L K   +  A+++  ++   G   +      L+ GLC  
Sbjct: 409 DLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLC-- 466

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   LEDA  +FE +  K       TY ++I+        DEAL  L    +   IP
Sbjct: 467 ---KGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIP 523

Query: 404 RTITFNNVIQALCGEGKIDKALLLL 428
             IT+  +I +L  + + DKA  LL
Sbjct: 524 DAITYEIIICSLFDKDENDKAEKLL 548



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 204/426 (47%), Gaps = 14/426 (3%)

Query: 29  LVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERI----DIFDSIKKDGTNWS 84
           L+ FA + L  A+ L +   P ++    F   IK   LK +I    +  D +   G +  
Sbjct: 120 LIPFAFSVL--AKILKMGYEPDTITLNTF---IKGFCLKGQIHQALNFHDKLVALGFHLD 174

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
              +  L+  L  + E   A++         +  +   +S +I   C   +  +A  +  
Sbjct: 175 QVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYS 234

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M       N+ T++ L++  C  G+LK+A+ + ++M      P++ T+N L+   C  G
Sbjct: 235 EMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEG 294

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           RV+EA   L  +   G+KPD+ TY ++MDG+C V   N A  +LN    RGVT  V ++N
Sbjct: 295 RVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYN 354

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            + NG+CK     + + L K M  +   P+ I+Y++L++GL K G+I  A+ +   M   
Sbjct: 355 IVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDR 414

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G + D    +S+L  LC     +  L++ A  +  K+  +    +  TY I+I  L KG 
Sbjct: 415 GQQPDIITYSSILDALC-----KNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGG 469

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + ++A       +  G+     T+  +IQ  C  G  D+AL LL  M +++ IP   +Y+
Sbjct: 470 RLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYE 529

Query: 445 MLITKL 450
           ++I  L
Sbjct: 530 IIICSL 535



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 175/339 (51%), Gaps = 5/339 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  D++  +     + ++  ++ L+    ++ + + A+  F++ +S  + P+ +
Sbjct: 222 KDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVY 281

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I++  +C +    EA+  +  M   G  P++ T+  L++  C    +  A  +L+ M
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 341

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G    +++YN ++ G C +  V++A ++   + +  + P+V TY +++DG CK GR 
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI 401

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+EL++   +RG  P+++T++++ +  CK     K + LL  +K +   P+  +Y+ L
Sbjct: 402 SYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTIL 461

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K G++  A +IF++++  G+ +       +++G C        L ++A  +  KM
Sbjct: 462 IDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFC-----SHGLFDEALSLLSKM 516

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
                + D  TY I+I +L    + D+A   L   I  G
Sbjct: 517 KDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRG 555



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 155/342 (45%), Gaps = 5/342 (1%)

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N ND  +A  + +C+      P    F  ++ SL KS      L +  +M   G KPN  
Sbjct: 47  NNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFV 106

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            +N L+   C +G +  A+ +L  +   G +PD  T    + GFC  G+ ++A+   ++ 
Sbjct: 107 NFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKL 166

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  G   + V++ TL NG CK G     + LL+ +  +    D + YST+++ + K   +
Sbjct: 167 VALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNV 226

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  ++ EMV      +    ++L+ G C+        L+DA  +F KMT +    D  
Sbjct: 227 NDAFDLYSEMVSRRISSNIVTYSALISGFCIVGK-----LKDAIGLFNKMTSENINPDVY 281

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           T+ I++    K  +  EA   L   ++ G  P  +T+N+++   C   +++ A  +L  M
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 341

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                  +  SY+++I    +++    A  L+     + + P
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFP 383



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 165/387 (42%), Gaps = 58/387 (14%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I +++   G   +V  +N ++     +   + A+K F E     + PN  T++ +I   C
Sbjct: 337 ILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLC 396

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A ++ID M D G  P++ T++ ++++LCK+  + +A+ +L ++   G +PN+ 
Sbjct: 397 KSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMY 456

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+ GLC  GR+E+A  +  ++   G    V TYT ++ GFC  G  +EA+ LL++ 
Sbjct: 457 TYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSK- 515

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
                                             MK  +C+PD I+Y  ++  L    + 
Sbjct: 516 ----------------------------------MKDNSCIPDAITYEIIICSLFDKDEN 541

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  + +EM+  G          L   L   SW    +   A+ +     +  S  + G
Sbjct: 542 DKAEKLLREMITRGL---------LYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESG 592

Query: 372 TYG-----------IVIRTLGKGKKTDEALIHLHHAIE---MGHIPRTITFNNVIQALCG 417
            +            ++ ++  + K  +   + ++   +    G+I    T+  +IQ  C 
Sbjct: 593 NWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCS 652

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYD 444
            G  D++L LL  M  +  IP   +YD
Sbjct: 653 HGLFDESLALLSKMEVNGCIPDAVTYD 679


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 210/413 (50%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA   +  + +   ++ +G        N L+     L   + +   F++    G  P++
Sbjct: 69  LKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDA 128

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+I+I+  C K +  +A    D +   G+  +  ++  L+N LC+ G  K A+++L +
Sbjct: 129 VTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRR 188

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           +     +PN+  Y+ ++  +C    V +A+++   + +  + PDV TY++++ GFC VG+
Sbjct: 189 VDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGK 248

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A++L N  I   + PNV TF+ L +G+CKEG   +   +L +M K+N   D ++Y++
Sbjct: 249 LKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNS 308

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G     ++  A S+F  M + G   D    + ++ G C     +  ++++A ++FE+
Sbjct: 309 LMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFC-----KIKMVDEAMKLFEE 363

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  K    +  TY  ++  L K  +T  AL  +    + G     IT+N+++ A+C    
Sbjct: 364 MHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNH 423

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +DKA++LL  + E    P   +Y +LI  L ++ +  DA  ++   L +G  P
Sbjct: 424 VDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSP 476



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 152/280 (54%), Gaps = 1/280 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        +D   K   ++E  ++   + K      V  +N L+    ++ +   A  
Sbjct: 265 NPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKS 324

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F+  +  G+ P+ W++SIMI  +C      EA K+ + M      PNV T+  LV+ LC
Sbjct: 325 LFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLC 384

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSGR   ALE++D+M   G   NI TYN +L  +C    V++A  +L  +K  G++PD++
Sbjct: 385 KSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIF 444

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYT +++G CKVGR ++A ++  + + +G +PN+ T+ +L NG+C +G   +G+ +L  M
Sbjct: 445 TYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKM 504

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
           K   C+P+ I+Y  L++ L +  +   A  + +EM+  G 
Sbjct: 505 KDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 180/353 (50%), Gaps = 6/353 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + K   + +  D++  +     +  V  ++ L+    ++ + + AV  
Sbjct: 196 PNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDL 255

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F+   S  + PN +TFSI+I  +C +    EA+ V+  M       +V T+  L++  C 
Sbjct: 256 FNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCL 315

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
             ++ +A  + + M + G  P++ +Y+ ++ G C +  V+EA ++   +    + P+V T
Sbjct: 316 VKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVT 375

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y +++DG CK GR++ A+EL++E  +RG   N++T+N++ +  CK     K + LL  +K
Sbjct: 376 YNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIK 435

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           ++   PD  +Y+ L+NGL K G++  A  +F++++  G+  +     SL+ G C K +  
Sbjct: 436 EKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGF-- 493

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
               ++   +  KM     + +  TY I+I +L +  + D+A   L   I  G
Sbjct: 494 ---FDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 168/325 (51%), Gaps = 5/325 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   + E  S  ++P+  T+S +I  +C       A  + + M  +  +PNV TF+IL++
Sbjct: 217 AFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILID 276

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             CK G+++EA  VL  M +   K ++ TYN L+ G C V +V +A  +   +   G+ P
Sbjct: 277 GFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTP 336

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV++Y+ +++GFCK+   +EAM+L  E   + + PNVVT+N+L +G CK G     + L+
Sbjct: 337 DVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELV 396

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M  R    + I+Y+++L+ + K   +  A+ +  ++   G + D      L+ GLC  
Sbjct: 397 DEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLC-- 454

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   L+DA +VFE +  K    +  TY  +I         DE L  L    + G IP
Sbjct: 455 ---KVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIP 511

Query: 404 RTITFNNVIQALCGEGKIDKALLLL 428
             IT+  +I +L  + + DKA  LL
Sbjct: 512 NAITYEILIHSLFEKDENDKAEKLL 536


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 197/402 (49%), Gaps = 8/402 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA--VKFFSEASSYGLAPNSWTFSIMIRC 129
           IFDS+   G    +  ++ +L       +   A     F+   + G+APN   F+I+I  
Sbjct: 352 IFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 411

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           Y       +A  + + M + G  P+  TF  +++SLC+ GRL +AL   + M  IG  P+
Sbjct: 412 YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 471

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
              Y CL++G C  G + +A E++  + N D   P V  ++++++  CK GR  E  +++
Sbjct: 472 EAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIM 531

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +  ++ G  PNVVTFN+L  GYC  G   +   LL  M      P+   Y TL++G  K 
Sbjct: 532 DMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKN 591

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G+I  A+++F++M+  G +    + + +L GL             A ++F +M +  +  
Sbjct: 592 GRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA-----AKKMFHEMIESGTTV 646

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
              TYG+V+  L +   TDEA + L     M      ITFN VI A+   G+  +A  L 
Sbjct: 647 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 706

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
             +  +  +P+  +Y M+IT L + E   +A  L+ +  K G
Sbjct: 707 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 748



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 188/425 (44%), Gaps = 42/425 (9%)

Query: 87  DFN-DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           DF+  L+   V   E + A   F E    G+ P     + +I+  C   +  +A  ++  
Sbjct: 191 DFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQK 250

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL----- 200
           M D+G  P++ T++++++ LCKS  + +A  VL+QM   G +PN  TYN L+ G      
Sbjct: 251 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGM 310

Query: 201 -------------CYV-----------------GRVEEAYEMLMNVKNDGLKPDVYTYTA 230
                        C V                 GR  EA  +  ++   G KPD+ +Y+ 
Sbjct: 311 WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYST 370

Query: 231 VMDGFCKVGRS--NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           ++ G+     S   +   + N  + +G+ PN   FN L N Y + G   K + + + M+ 
Sbjct: 371 MLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQN 430

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           +  +PD ++++T+++ L + G++  A+  F  MV  G    E +   L++G C       
Sbjct: 431 KGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC----NHG 486

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
           +L++    + E M K +       +  +I  L K  +  E    +   ++ G  P  +TF
Sbjct: 487 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 546

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           N++++  C  G +++A  LL  M      P+   Y  L+    +  +  DA  ++   L 
Sbjct: 547 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLH 606

Query: 469 QGVIP 473
           +GV P
Sbjct: 607 KGVKP 611



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 7/264 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P    FS +I   C +    E + ++D M   G  PNV TF  L+   C  G ++EA  +
Sbjct: 506 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 565

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           LD M  IG +PN   Y  L+ G C  GR+++A  +  ++ + G+KP    Y+ ++ G  +
Sbjct: 566 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 625

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R+  A ++ +E IE G T ++ T+  +  G C+     +   LL+ +   N   D I+
Sbjct: 626 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 685

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEEKDLLEDAYQ 356
           ++ +++ + K G+ + A  +F  +  +G   + +  + ++  L   +S+EE D       
Sbjct: 686 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEAD------N 739

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTL 380
           +F  + K    +D      ++R L
Sbjct: 740 LFISVEKSGHASDSRLLNHIVRML 763



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 109/230 (47%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN  TF+ ++  YC   +  EA  ++D M   G  PN   +  LV+  CK+GR+ +A
Sbjct: 538 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 597

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L V   M   G KP    Y+ +L GL    R   A +M   +   G    ++TY  V+ G
Sbjct: 598 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 657

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            C+   ++EA  LL +     V  +++TFN + +   K G   +   L   +     +P+
Sbjct: 658 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 717

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
             +YS ++  L+K      A ++F  + + G   D R++N ++R L  K+
Sbjct: 718 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 767



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 136/347 (39%), Gaps = 76/347 (21%)

Query: 174 ALEVLDQMGRIGCK----PNIQTYNCLLK----------GLCYVGRV--------EEAYE 211
           A+E+  +M R  C     P I TYN L+           GL  VGR+        + +Y 
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 195

Query: 212 MLMNVKNDG--------------------------------------------------- 220
           ++     DG                                                   
Sbjct: 196 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 255

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + PD++TY+ ++DG CK    ++A  +L + +E G  PN +T+N+L +GY   G   + V
Sbjct: 256 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 315

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            + K M     +P   + ++ ++ L K G+   A  IF  MV  G + D    +++L G 
Sbjct: 316 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 375

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
              +      L D + +F  M  K    +   + I+I    +    D+A++        G
Sbjct: 376 ATAT---DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 432

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            IP T+TF  VI +LC  G++D AL     M +    PS   Y  LI
Sbjct: 433 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLI 479



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 96/212 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  DI D + + G   +V  FN L+    ++   E A       +S G+ PN +
Sbjct: 520 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 579

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  ++  YC      +A  V   M   G  P    ++I+++ L ++ R   A ++  +M
Sbjct: 580 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 639

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +I TY  +L GLC     +EA  +L  +    +K D+ T+  V+    KVGR 
Sbjct: 640 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 699

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
            EA EL +     G+ PN+ T++ +     KE
Sbjct: 700 QEAKELFDAISTYGLVPNIQTYSMMITNLIKE 731



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 8/224 (3%)

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
           A  R   P + T+N L + Y +   P  G+ ++  + K    PD  SYS L+ G +K G+
Sbjct: 147 ACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGE 205

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           +  A  +F EM+  G      + NS+++ LC MK       ++ A  + +KM       D
Sbjct: 206 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKE------MDKAESIVQKMVDSGIAPD 259

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY ++I  L K K  D+A   L   +E G  P +IT+N++I      G  ++++ +  
Sbjct: 260 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 319

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M     IP+  + +  I  L +  ++ +A  ++ + + +G  P
Sbjct: 320 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKP 363


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 197/408 (48%), Gaps = 7/408 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     +  DG    V  +N L+  L        A K F   +  GL P   T+  +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG HPN   F+IL+ +  K G++ +A+ V  +M + G 
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P+  TY  ++  LC  GRVE+A      + ++ L P    Y +++   C   + ++A E
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E ++RG+  + + FN++ + +CKEG  ++   L  LM +    P+ I+YSTL++G  
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYC 525

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A  +   MV  G + D    N+L+ G C  S      +EDA  +F +M     
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR-----MEDALVLFREMESSGV 580

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY I+++ L + ++T  A        E G      T+N ++  LC     D+AL 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 427 LLF-LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   L     ++ +RT ++++I  L ++ ++ +A  L+ A    G++P
Sbjct: 641 MFQNLCLTDLQLETRT-FNIMIGALLKVGRNDEAKDLFAALSANGLVP 687



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 206/429 (48%), Gaps = 18/429 (4%)

Query: 58  VDRIKASPL-------KERIDIFDSIKKDGTNW----SVSDFNDLLMALVMLNEQETAVK 106
           VD I  +PL       K   D  D + +  T      +V  +N LL  L   N  + A++
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183

Query: 107 FFSEASSYG--LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
                   G    P+  +++ +I  +  + D  +A      M D G  PNV T+  ++ +
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAA 243

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           LCK+  + +A+EVL  M + G  PN +TYN ++ G C  G+ +EA   L  + +DG++PD
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V TY ++MD  CK GR  EA ++ +   +RG+ P + T+ TL  GY  +G  ++  GLL 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           LM +    P+   +S L+    K GK+  A+ +F +M + G   D     +++  LC KS
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC-KS 422

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
                 +EDA + FE+M  +        Y  +I +L    K D+A   +   ++ G    
Sbjct: 423 GR----VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
           TI FN++I + C EG++ ++  L  LM      P+  +Y  LI       K  +A  L  
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 465 AALKQGVIP 473
           + +  G+ P
Sbjct: 539 SMVSVGMKP 547



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 200/398 (50%), Gaps = 20/398 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N   +A V  +    AV  ++  +  G   + PN  T+ I+I 
Sbjct: 41  VFDELLRRGRGASIYGLN-CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIG 99

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
             C           +  +   G+  +   FT L+  LC   R  +A++ VL +M ++GC 
Sbjct: 100 SCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCI 159

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDGFCKVGRSNEAM 245
           PN+ +YN LLKGLC   R +EA E+L  + +DG    PDV +YT V++GF K G  ++A 
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
              +E ++RG+ PNVVT+N++    CK     K + +L  M K   +P+  +Y+++++G 
Sbjct: 220 GTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+ + A+   K+M   G E D    NSL+  LC     +     +A ++F+ MTK+ 
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC-----KNGRCTEARKMFDSMTKRG 334

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGKI 421
              +  TYG    TL +G  T  AL+ +H  +++    G  P    F+ +I A   +GK+
Sbjct: 335 LKPEITTYG----TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           D+A+L+   M +    P   +Y  +I  L +  +  DA
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 188/384 (48%), Gaps = 10/384 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + +F  +++ G N     +  ++  L      E A+++F +     L+P + 
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C  + + +A+++I  M D G   +   F  +++S CK GR+ E+ ++ D M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            RIG KPNI TY+ L+ G C  G+++EA ++L ++ + G+KPD  TY  +++G+CK+ R 
Sbjct: 506 VRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L  E    GV+P+++T+N +  G  +         L   + +     +  +Y+ +
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL--CMKSWEEKDLLEDAYQVFE 359
           L+GL K      A+ +F+ +     +++ R  N ++  L    ++ E KDL       F 
Sbjct: 626 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL-------FA 678

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            ++    V D  TY ++   L +    +E         E G    +   N++++ L   G
Sbjct: 679 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738

Query: 420 KIDKALLLLFLMYE-HAKIPSRTS 442
            I +A   LF++ E H  + + T+
Sbjct: 739 DITRAGTYLFMIDEKHFSLEASTA 762



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 171/383 (44%), Gaps = 40/383 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FDS+ K G    ++ +  LL                      G+ PN + FSI+I  Y 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    +A  V   M   G +P+  T+  ++  LCKSGR+++A+   +QM      P   
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGL------------------------------ 221
            YN L+  LC   + ++A E+++ + + G+                              
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 222 -----KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                KP++ TY+ ++DG+C  G+ +EA +LL   +  G+ P+ VT+NTL NGYCK    
Sbjct: 506 VRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
              + L + M+     PD I+Y+ +L GL +  +   A  ++  +   G +++    N +
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           L GLC     + +L ++A ++F+ +       +  T+ I+I  L K  + DEA       
Sbjct: 626 LHGLC-----KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680

Query: 397 IEMGHIPRTITFNNVIQALCGEG 419
              G +P   T++ + + L  +G
Sbjct: 681 SANGLVPDVRTYSLMAENLIEQG 703



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 149/343 (43%), Gaps = 47/343 (13%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC---KPNIQTYN 194
           +AR V D +   G   ++      +  + +      A+   ++M R G     PN+ TY 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEAIE 253
            L+   C  GR++  +  L NV   G + D   +T ++ G C   R+++AM++ L    +
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR--NCLPDKISYSTLLNGLLKWGKI 311
            G  PNV ++N L  G C E    + + LL++M     +C PD +SY+T++NG  K G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD- 214

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
                                                  L+ AY  + +M  +  + +  
Sbjct: 215 ---------------------------------------LDKAYGTYHEMLDRGILPNVV 235

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L K +  D+A+  L   ++ G +P   T+N+++   C  G+  +A+  L  M
Sbjct: 236 TYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +     P   +Y+ L+  L +  +  +A  ++ +  K+G+ P+
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 4/165 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +++  I + GT   +S +N +L  L   N  + A++ F       L   + TF+IMI   
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 664

Query: 131 --CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
               +ND  EA+ +   +  NG  P+V T++++  +L + G L+E  ++   M   GC  
Sbjct: 665 LKVGRND--EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           N +  N +++ L   G +  A   L  +       +  T +  +D
Sbjct: 723 NSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 181/393 (46%), Gaps = 15/393 (3%)

Query: 88  FNDLLMALV---MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
            N LLMAL    ML++ E+               N  T++ +I  YC+  D   A++ + 
Sbjct: 46  LNTLLMALARHGMLSDMESLAARMP-------VRNLHTYTTLINAYCHAGDLPAAKRHLS 98

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   G  P+   +T  V   C++G    A  +   M + GC     TY  LL+GLC  G
Sbjct: 99  SLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAG 158

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            V EA  +   +  DG  PD + Y+ ++ G C  GR+ EA+ LL +A+ +G  PNV  +N
Sbjct: 159 MVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYN 218

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +GYC  G     + + K M+ + CLP+  +Y+ L+ G  K GK+  A+ ++  M+  
Sbjct: 219 ALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEA 278

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   +     +L++G C +       LE A+++   M       +  T  ++I  L K  
Sbjct: 279 GLAPNVVTYTTLIQGQCSEGH-----LEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHG 333

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + +EA   L   ++ G     + + ++I ALC  GK D A  L+  +     +P    Y 
Sbjct: 334 RIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYS 393

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
            LI  L +  K  +A +L    ++ GV     P
Sbjct: 394 SLIDGLCRENKLLEAISLLNDMIESGVQANAVP 426



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 188/403 (46%), Gaps = 13/403 (3%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  ++E + +F  +  DG       ++ ++  L        AV   ++A   G  PN   
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  YC+  D   A  +   M   G  PNV T+T L+   CKSG+++ A+ +  +M 
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G  PN+ TY  L++G C  G +E A+ +L +++  GL P+ +T   ++D  CK GR  
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIE 336

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA + L   +++G+  N V + ++ +  CK G       L++ +     +PD   YS+L+
Sbjct: 337 EAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLI 396

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE----DAYQVF 358
           +GL +  K+  A+S+  +M+  G + +      L+         +K L E        + 
Sbjct: 397 DGLCRENKLLEAISLLNDMIESGVQANAVPFTILI---------DKHLREFRSDSPKMIS 447

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           ++M       D  TY + IR+  +  + ++A   +   I+ G  P   T+N +I+     
Sbjct: 448 DRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANL 507

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           G + +A   L  M ++   P+  SY +L+  L +    +D  A
Sbjct: 508 GLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVA 550



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 161/362 (44%), Gaps = 5/362 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+ A     +   A +  S     GLAP+S  ++  +  YC    F  A ++   M 
Sbjct: 77  YTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMP 136

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G      T+  L+  LC +G ++EA+ V   M   GC P+   Y+ ++ GLC  GR  
Sbjct: 137 QRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAG 196

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  +L +    G  P+V  Y A++DG+C  G    A+++      +G  PNV T+  L 
Sbjct: 197 EAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLI 256

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G+CK G   + + L   M +    P+ ++Y+TL+ G    G +  A  +   M   G  
Sbjct: 257 CGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLA 316

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +E     L+  LC     +   +E+A Q    + +K    +   Y  +I  L K  K D
Sbjct: 317 PNEWTCLVLIDALC-----KHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFD 371

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            A   +   I  G +P    ++++I  LC E K+ +A+ LL  M E     +   + +LI
Sbjct: 372 GAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILI 431

Query: 448 TK 449
            K
Sbjct: 432 DK 433



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 177/412 (42%), Gaps = 52/412 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  ++  + ++  + + G   +V  +  L+         E A +      + GLAPN W
Sbjct: 261 KSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEW 320

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T  ++I   C      EA++ +  +   G   N   +T ++++LCKSG+   A  ++ ++
Sbjct: 321 TCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKI 380

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-----------------------KN 218
              G  P+   Y+ L+ GLC   ++ EA  +L ++                       ++
Sbjct: 381 ITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRS 440

Query: 219 D------------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           D            G+KPDV TYT  +  +C+ GR  +A  ++ + I+ GV PN+ T+NTL
Sbjct: 441 DSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTL 500

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK----IRPAVSIFKEMV 322
             GY   G   +    LK M    C P+  SY+ LL  LLK       +  ++S++K + 
Sbjct: 501 IKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIV- 559

Query: 323 RFGFEVDERMMNSLLRGLC----------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
               +V E ++  +++  C          ++   + D LE+A      M           
Sbjct: 560 --DMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDV 617

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           Y  +I    + K   EAL  L   ++  ++PR  ++  +I ALC EG    A
Sbjct: 618 YTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTA 669



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 139/342 (40%), Gaps = 61/342 (17%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L   N+   A+   ++    G+  N+  F+I+I  +  +      + + D M 
Sbjct: 392 YSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMA 451

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V T+T+ + S C+ GR+++A  ++ QM   G +PN+ TYN L+KG   +G V 
Sbjct: 452 AAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVS 511

Query: 208 EAYEMLMNVKNDGLKPDVYTYTA------------------------------------- 230
           +A+  L N+ ++G KP+  +YT                                      
Sbjct: 512 QAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEV 571

Query: 231 ----------VMDGF----CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                     V D F     KV R  EA   L       +TP+   +  +     +    
Sbjct: 572 IKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLL 631

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            + +  L  M KRN LP   SY  ++  L + G    A SIF +++   +  DE     L
Sbjct: 632 KEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKIL 691

Query: 337 LRGLCMK----------SWEEKDLLEDAYQVFEKMTKKVSVT 368
           + GL  K          S+ E+        ++ ++T +++VT
Sbjct: 692 IDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEITVT 733


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 194/402 (48%), Gaps = 10/402 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++D+++KDG + +V  +N L+ AL   N    A K   E +  G  P+  T++ ++   C
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             +   EA +V+  M      P   ++  +V +LC+  R++E   V+  M   G +PN+ 
Sbjct: 206 KLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI 260

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  ++   C  G +  A  +L  +   G  P+V T+TA++ G    GR ++A+++    
Sbjct: 261 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 320

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  G  P+ V++N L  G C  G       +L  M++  C P+  +YSTL++G  K G +
Sbjct: 321 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDL 380

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+SI+ +M R G + +  +  +++   C     +K +   A  + +KM  +    +  
Sbjct: 381 GGAISIWNDMSRSGCKPNVVVYTNMVDVFC-----KKLMFNQAKSLIDKMLLENCPPNTV 435

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           T+  +IR+L   ++   AL   H     G +P   T+N +I  L  EG    AL ++  M
Sbjct: 436 TFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEM 495

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             H    S  +Y+ +++ L Q   S +A    G  + QG+ P
Sbjct: 496 QSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQP 537



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 190/388 (48%), Gaps = 5/388 (1%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + +N +++AL      +      S+    GL PN  T++ ++  +C   +   A  ++  
Sbjct: 225 ASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILAR 284

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G  PNV TFT LV  L   GR+ +AL++   M   G  P+  +YN L++GLC VG 
Sbjct: 285 MVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGD 344

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++ A  +L +++  G  P+V TY+ ++DGF K G    A+ + N+    G  PNVV +  
Sbjct: 345 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 404

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + + +CK+    +   L+  M   NC P+ ++++TL+  L    ++  A+ +F EM R G
Sbjct: 405 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 464

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              + R  N L+ GL    + E +  +  + V E  +  + ++   TY  V+  L + + 
Sbjct: 465 CVPNGRTYNELIHGL----FREGNCGDALHMVTEMQSHGIELSLV-TYNTVVSGLCQTRM 519

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           + EA++ +   I  G  P   TF+ +I A C EG++  A  +L  M       +   Y +
Sbjct: 520 SREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTI 579

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           L+ +L   +K  DA       L +G+ P
Sbjct: 580 LMAELCNQDKLVDAMTYLLKMLYEGIYP 607



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 138/275 (50%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK    I +S+++ G   +V  ++ L+       +   A+  +++ S  G  PN   ++ 
Sbjct: 345 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 404

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           M+  +C K  F +A+ +ID M      PN  TF  L+ SLC   R+  AL V  +M R G
Sbjct: 405 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 464

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN +TYN L+ GL   G   +A  M+  +++ G++  + TY  V+ G C+   S EAM
Sbjct: 465 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 524

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
             + + I +G+ PN  TF+ + + YCKEG       +L  M   NC  + + Y+ L+  L
Sbjct: 525 VFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL 584

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
               K+  A++   +M+  G   +    N L+RG+
Sbjct: 585 CNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 619


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 204/433 (47%), Gaps = 55/433 (12%)

Query: 72  IFD-SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
            FD S K++G    V  +  LL  LV       AV+FF         P+ ++F+I+I+C+
Sbjct: 30  FFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCF 89

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           CN  +   A + +  M   G  P+VT + +++   C  GR+  AL    +MG+  CKPN+
Sbjct: 90  CNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNV 148

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT--------------------- 229
            TYN ++ GLC  G+++ A  +   + +D + PD +TY+                     
Sbjct: 149 ATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDM 208

Query: 230 --------------AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
                         A+ DGFCK  R +EA+E+L   I+RG  P+VVT+N + NG C+   
Sbjct: 209 MLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKN 268

Query: 276 PM-KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
            + +   L + M   +C P+ ++Y T++ GL K  +++  + +FK M + G   D    +
Sbjct: 269 RIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYH 328

Query: 335 SLLRGL--CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK--TDEAL 390
           SL+       K  E K +L+DA        +     D   Y  +I    + +K   DEAL
Sbjct: 329 SLIYAFVKVRKLDEAKSILQDA-------ARNHVGPDVYMYTTLISGYCRARKPRVDEAL 381

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT-- 448
           +   +  +    P  IT+N V++ LC  G+ D+A  +   M++    P+R ++ ++    
Sbjct: 382 LLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGM 441

Query: 449 ----KLDQLEKSY 457
               K D+ E+ +
Sbjct: 442 IHCGKTDKFERIF 454



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 3/267 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+  I ++D + +   +     +N +          + A++        G  P+  
Sbjct: 195 QAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVV 254

Query: 122 TFSIMIRCYCN-KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T++ +I   C  KN   EA ++   M  +   PN  T+  ++  L K   ++  LE+   
Sbjct: 255 TYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKG 314

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV-- 238
           M + G  P+   Y+ L+     V +++EA  +L +   + + PDVY YT ++ G+C+   
Sbjct: 315 MSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARK 374

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
            R +EA+ L     +R V PNV+T+N +  G CK G   +   + + M K  C P+++++
Sbjct: 375 PRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTF 434

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFG 325
             +  G++  GK      IF +MV  G
Sbjct: 435 KVMTMGMIHCGKTDKFERIFMDMVYKG 461


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 203/408 (49%), Gaps = 8/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E ID+F ++ +     S+ +F+ LL  +      +  +  F      G+  + +T++I
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I C C  + F  A  V+  M   GY P+V T + L+N  C+  R+  A++++ +M  + 
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CK ++  YN ++ G C  G V  A  +   ++ DG++ D  TY +++ G C  GR ++A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L+ + + R + PNV+TF  L N + +EG  ++     + M +R   PD  +Y+++++GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G++  A  I   MV  G   D    N+L+ G C     +   +++  ++  +M+++ 
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFC-----KTKRVDEGTKLVREMSQRG 344

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            V D  T+  +I+   +  + D A         MG  P   T++ ++  LC   +++KAL
Sbjct: 345 LVVDTVTFNTIIQGYFQAGRPDAAQEIFSR---MGSRPNIRTYSILLYGLCYNWRVEKAL 401

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +L   M +       T+Y+++I  +  +    DA  L+ +   +G+ P
Sbjct: 402 VLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEP 449



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 4/286 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  +++DG       +N L+  L     +  A +   +     + PN  TF+ +I  + 
Sbjct: 196 LFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFV 255

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +  F EA+K  + M      P+V T+  +++ LC  G++ EA ++LD M   GC P++ 
Sbjct: 256 REGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVV 315

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G C   RV+E  +++  +   GL  D  T+  ++ G+ + GR + A E+ +  
Sbjct: 316 TYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM 375

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              G  PN+ T++ L  G C      K + L + M+K     D  +Y+ +++G+   G +
Sbjct: 376 ---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNV 432

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQ 356
             A  +F  +   G E D     +++ G C K  W++ D L    Q
Sbjct: 433 EDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQ 478



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 32/242 (13%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  F  L+ A V   +   A KF+ E     + P+ +T++ MI   C      EA++++
Sbjct: 243 NVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQIL 302

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG--------------------- 182
           D M   G  P+V T+  L+N  CK+ R+ E  +++ +M                      
Sbjct: 303 DLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQA 362

Query: 183 -----------RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
                      R+G +PNI+TY+ LL GLCY  RVE+A  +  +++   ++ D+ TY  V
Sbjct: 363 GRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIV 422

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           + G C +G   +A +L      +G+ P+VVT+ T+ +G+C++    K   L + M++   
Sbjct: 423 IHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGL 482

Query: 292 LP 293
           LP
Sbjct: 483 LP 484



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 142/305 (46%), Gaps = 5/305 (1%)

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           S  L EA+++   M +    P+I  ++ LL  +      +    +  N++  G+  D+YT
Sbjct: 47  SMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYT 106

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  V++  C+  R   A+ ++ + ++ G  P+VVT ++L NG+C+       V L+  M+
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKME 166

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +  C  D + Y+T+++G  K G +  A+ +F  M R G   D    NSL+ GLC      
Sbjct: 167 EMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRR- 225

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
                DA ++   M  +  V +  T+  +I    +  K  EA       I     P   T
Sbjct: 226 ----SDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFT 281

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N++I  LC  G++D+A  +L LM      P   +Y+ LI    + ++  +   L     
Sbjct: 282 YNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMS 341

Query: 468 KQGVI 472
           ++G++
Sbjct: 342 QRGLV 346



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 3/193 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   I D +   G    V  +N L+         +   K   E S  GL  ++ TF+ 
Sbjct: 295 VDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNT 354

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+ Y        A+++   M   G  PN+ T++IL+  LC + R+++AL + + M +  
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSE 411

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            + +I TYN ++ G+C +G VE+A+++  ++   GL+PDV TYT ++ GFC+    ++A 
Sbjct: 412 MELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKAD 471

Query: 246 ELLNEAIERGVTP 258
            L  +  E G+ P
Sbjct: 472 FLYRKMQEDGLLP 484


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 196/417 (47%), Gaps = 11/417 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + +  ++ D +K+ G    V   + L+  L      + A++ F        +PN  
Sbjct: 11  KAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVI 69

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCM-----FDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           T++ ++   C  N   E  ++ D M       +G  P+V +++ ++++LCK+ R+ +A E
Sbjct: 70  TYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYE 129

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
              +M  +GC PN+ TY+ L+ GLC V RV+EAY +LM +K + + P    Y AV++GF 
Sbjct: 130 YFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFK 189

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + G+ +E +ELL    E+G   N++ FN + +   K     K     + + K    P+ +
Sbjct: 190 RQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVV 249

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y+  ++GL K GK+  A  I  EMV      D    +S++ G C     +K     A  
Sbjct: 250 TYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDK-----ADD 304

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           VF +M     +  P T+  ++    + KK+ EA       +  G IP   T+N ++  +C
Sbjct: 305 VFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVC 364

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G   ++ AL +   M    + P   +Y  LI  L +  +  +A           V+P
Sbjct: 365 GADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVP 421



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 177/356 (49%), Gaps = 11/356 (3%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  +C      +A +++D M + G   +V   + L+  LC+ GR+ EALE    MG
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK-----NDGLKPDVYTYTAVMDGFCK 237
              C PN+ TYN ++ GLC   R++E  E+  +++     + G +PDV +Y+ V+D  CK
Sbjct: 62  E-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R ++A E        G  PNVVT+++L +G CK     +   LL  +K  + +P  + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+ ++NG  + GK    + +   M   GF ++    N++L  L    W + D  E A Q 
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHAL----W-KNDEQEKACQF 235

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           FE++ K     +  TY + +  L K  K DEA   L   +E    P  IT++++I   C 
Sbjct: 236 FERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCK 295

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            G++DKA  +   M  H  IP   ++  L+    + +KS +A  ++   +  G IP
Sbjct: 296 AGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIP 351



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 206/474 (43%), Gaps = 64/474 (13%)

Query: 62  KASPLKERIDIFDSIKK-----DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           KA+ + E +++FD ++K      G    V  ++ ++ AL      + A ++F    + G 
Sbjct: 80  KANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGC 139

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           APN  T+S +I   C  +   EA  ++  +      P    +  +VN   + G+  E LE
Sbjct: 140 APNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLE 199

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +L  M   G   NI  +N +L  L      E+A +    +   G KP+V TY   + G C
Sbjct: 200 LLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLC 259

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G+ +EA  +L E +E  VTP+V+T++++ +G+CK G   K   +   M    C+P  +
Sbjct: 260 KAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPV 319

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           ++ TLL+G  +  K R A  + ++MV  GF    +  N L+  +C       D +E A +
Sbjct: 320 TFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVC-----GADSVESALE 374

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE-----------------ALIH------- 392
           ++ KM +K    D  TY  +I+ L + ++ DE                 A+ H       
Sbjct: 375 IYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLC 434

Query: 393 -----------LHHAIEM-------------------GHIPRTITFNNVIQALCGEGKID 422
                      L + +E+                   G  P   T+  V+++LCG  ++D
Sbjct: 435 KQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVD 494

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            A+     M      P   +Y +LI +    + + DA  ++ A +  G  PQ +
Sbjct: 495 SAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQ 548



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 170/393 (43%), Gaps = 24/393 (6%)

Query: 49  PRSLQAQRFVDRIK--ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           PR++     V+  K    P  E +++   +K+ G   ++ DFN +L AL   +EQE A +
Sbjct: 176 PRAMYYNAVVNGFKRQGKP-SECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 234

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
           FF      G  PN  T+++ +   C      EA +++  M ++   P+V T++ +++  C
Sbjct: 235 FFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFC 294

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K+GR+ +A +V  +M    C P+  T+  LL G     +  EA+ +  ++ N G  P + 
Sbjct: 295 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 354

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY  +MD  C       A+E+ ++   +   P+  T+  L    C+     +    L +M
Sbjct: 355 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVM 414

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           +  N +P+      L+  L K G++  A S+   +V                 +C K+ E
Sbjct: 415 EADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE----------------IC-KAGE 457

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
                ++A +V E+M  K    D  TY  V+R+L    + D A+         G  P  +
Sbjct: 458 P----DEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLV 513

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           T+  +I   C     D A  +   M      P 
Sbjct: 514 TYTLLIGEACSADMADDAFRIFEAMVAAGFTPQ 546



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 133/309 (43%), Gaps = 21/309 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E   I   + +      V  ++ ++         + A   F+    +   P+  
Sbjct: 260 KAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPV 319

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF  ++  +       EA +V + M + G+ P + T+ +L++ +C +  ++ ALE+  +M
Sbjct: 320 TFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKM 379

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP----------------DV 225
            R   +P+  TY  L++ LC   RV+EA E L  ++ D + P                +V
Sbjct: 380 KRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEV 439

Query: 226 YTYTAVMDG---FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
               +V+D     CK G  +EA+E++ + + +GV P+  T+  +    C        +  
Sbjct: 440 DEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAE 499

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
            + M  R C P  ++Y+ L+           A  IF+ MV  GF    + M +L    C+
Sbjct: 500 FEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTL--SSCL 557

Query: 343 KSWEEKDLL 351
           +    +DLL
Sbjct: 558 RDAGYQDLL 566



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 25/201 (12%)

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+T++NG  K G++  A  +  EM   G ++D  + ++L++GLC K       +++A + 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGR-----IDEALEQ 56

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL-----IHLHHAIEMGHIPRTITFNNVI 412
           F+ M ++ S  +  TY  V+  L K  + DE L     +   +    G  P  I+++ VI
Sbjct: 57  FKSMGEECS-PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVI 115

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDAC--------- 460
            ALC   ++DKA      M      P+  +Y  LI    K+D+++++Y            
Sbjct: 116 DALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMV 175

Query: 461 --ALYGAALKQGVIPQRKPQD 479
             A+Y  A+  G   Q KP +
Sbjct: 176 PRAMYYNAVVNGFKRQGKPSE 196


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 188/385 (48%), Gaps = 7/385 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I++F  I           ++ L+  L      + AV    E    G  PN   F+++I  
Sbjct: 190 IEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISA 249

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C K D   A K++D MF  G  PN  T+  LV+ LC  G+L++A+ +L+QM    C PN
Sbjct: 250 LCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPN 309

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             T+  L+ G    GR  +   +L++++  G + + Y Y++++ G CK G+ N+AMEL  
Sbjct: 310 DVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWK 369

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E + +G  PN + ++ L +G C+EG   +  G L  MK +  LP+  +YS+L+ G  + G
Sbjct: 370 EMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAG 429

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
               A+ ++KEM       +E   + L+ GLC    ++   +E A  V+++M  +    D
Sbjct: 430 DSHKAILVWKEMANNNCIHNEVCYSILINGLC----KDGKFME-ALMVWKQMLSRGIKLD 484

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI--PRTITFNNVIQALCGEGKIDKALLL 427
              Y  +I         ++ L   +  +  G +  P  IT+N ++ A C +  I +A+ +
Sbjct: 485 VVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDI 544

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQ 452
           L +M +    P   + D+ +  L +
Sbjct: 545 LNIMLDQGCDPDFITCDIFLKTLRE 569



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 173/356 (48%), Gaps = 7/356 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + + D ++ +GT  ++  FN L+ AL    +   A K        G  PN  
Sbjct: 217 KEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEV 276

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C K    +A  +++ M  N   PN  TF  L+N     GR  +   VL  +
Sbjct: 277 TYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSL 336

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + N   Y+ L+ GLC  G+  +A E+   +   G  P+   Y+A++DG C+ G+ 
Sbjct: 337 EARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKL 396

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA   L+E   +G  PN  T+++L  GY + G   K + + K M   NC+ +++ YS L
Sbjct: 397 DEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSIL 456

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K GK   A+ ++K+M+  G ++D    +S++ G C       +L+E   ++F +M
Sbjct: 457 INGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFC-----NANLVEQGLKLFNQM 511

Query: 362 TKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
             +  V  P   TY I++      K    A+  L+  ++ G  P  IT +  ++ L
Sbjct: 512 LCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTL 567



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 162/320 (50%), Gaps = 5/320 (1%)

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
           HPN  TF +++ ++C+ G + +A+EV  ++    C P+  TY+ L+ GLC   R++EA  
Sbjct: 167 HPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVS 226

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +L  ++ +G  P++  +  ++   CK G    A +L++    +G  PN VT+N L +G C
Sbjct: 227 LLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLC 286

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
            +G   K V LL  M    C+P+ +++ TL+NG +  G+      +   +   G   +E 
Sbjct: 287 LKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEY 346

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
           + +SL+ GLC     ++     A +++++M  K    +   Y  +I  L +  K DEA  
Sbjct: 347 VYSSLISGLC-----KEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARG 401

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            L      G++P + T++++++     G   KA+L+   M  +  I +   Y +LI  L 
Sbjct: 402 FLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLC 461

Query: 452 QLEKSYDACALYGAALKQGV 471
           +  K  +A  ++   L +G+
Sbjct: 462 KDGKFMEALMVWKQMLSRGI 481



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 15/323 (4%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVG---RVEEAYEML 213
           F ++  +  K+   ++A+++  +M G   CK  ++++N +L  +   G   R  E Y  +
Sbjct: 99  FIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHV 158

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
           +  K+  + P+  T+  V+   C++G  ++A+E+  E   R   P+  T++TL +G CKE
Sbjct: 159 VASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKE 218

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
               + V LL  M+     P+ ++++ L++ L K G +  A  +   M   G   +E   
Sbjct: 219 ERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTY 278

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL---GKGKKTDEAL 390
           N+L+ GLC+K       LE A  +  +M     V +  T+G +I      G+       L
Sbjct: 279 NALVHGLCLKG-----KLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVL 333

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           + L      GH      ++++I  LC EGK ++A+ L   M      P+   Y  LI  L
Sbjct: 334 VSLE---ARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGL 390

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +  K  +A         +G +P
Sbjct: 391 CREGKLDEARGFLSEMKNKGYLP 413


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 154/283 (54%), Gaps = 5/283 (1%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F E  S GL P+  T++ +I  YC   +   A  + + M   G  PN+ T+  L++ LC
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K G L  A E+LD+M + G + N+  YN ++ G+C  G +E+A +++  ++  G+ PD  
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYT V+D +C++G  ++A +LL E ++RG+ P VVTFN L NG+C  G    G  LL  M
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            ++  +PD I+Y+TL+        +     I+K M   G   D    N L++G C     
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC----- 654

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
           +   L++A+ ++++M +K  V    +Y  +I+   K KK  EA
Sbjct: 655 KARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEA 697



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 210/415 (50%), Gaps = 11/415 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ-ETAVKFFSEASSYGLAPN 119
           ++   L E   + D +   G   +V   N  L  +   +E  E A+K F E   YG++ N
Sbjct: 201 VEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCE---YGISWN 257

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           + +++I+I   C      EA +++  M      P+V +++ +++  C  G LK+AL+++D
Sbjct: 258 TTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMD 317

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M   G KPN  TYN ++  LC +G+  EA ++L  + +  + PD   YT ++ GF K+G
Sbjct: 318 DMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLG 377

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
               A +  +E + + ++P+ +T+ TL  G+ + G  ++   L   M  R   PD+++Y+
Sbjct: 378 HVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYT 437

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL++   K G++  A S+  EMV+ G   +     +L+ GLC     +   L+ A ++ +
Sbjct: 438 TLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC-----KHGELDTANELLD 492

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGE 418
           +M KK    +   Y  ++  + K    ++A I L   +E+  I P  IT+  VI A C  
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQA-IKLMKEMEVAGIDPDAITYTTVIDAYCRL 551

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G IDKA  LL  M +    P+  ++++L+     L    D   L G  L++G++P
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVP 606



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 190/396 (47%), Gaps = 9/396 (2%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G +W+ + +N ++ +L  L + + A +   +       P+  ++S +I  YC+  +  +A
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            K++D M   G  PN  T+  ++  LCK G+  EA +VL +M      P+   Y  L+ G
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
              +G V  A +    + +  + PD  TYT ++ GF + G+  E   L +E I RG+ P+
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VT+ TL + YCK G  +    L   M +    P+ ++Y  L++GL K G++  A  +  
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVI 377
           EM + G +++  + NS++ G+C     +   +E A ++ ++M  +V+  DP   TY  VI
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGIC-----KAGNIEQAIKLMKEM--EVAGIDPDAITYTTVI 545

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               +    D+A   L   ++ G  P  +TFN ++   C  G ++    LL  M E   +
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P   +Y+ L+ +            +Y     QGV P
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAP 641



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 189/407 (46%), Gaps = 5/407 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK+ + + D ++  G   +   +N +++ L  + +   A K   E  S  + P++  ++ 
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTT 368

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +        A K  D M      P+  T+T L+    + G++ E   +  +M   G
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KP+  TY  L+   C  G +  A+ +   +   G+ P++ TY A++DG CK G  + A 
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL+E  ++G+  NV  +N++ NG CK G   + + L+K M+     PD I+Y+T+++  
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G I  A  + +EM+  G +      N L+ G CM       +LED  ++   M +K 
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLG-----MLEDGDRLLGWMLEKG 603

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            V D  TY  +++        +            G  P + T+N +I+  C    + +A 
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            L   M E   +P+ TSY+ LI +  + +K  +A  L+      G++
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLV 710



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 144/313 (46%), Gaps = 42/313 (13%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQ----------------MGRI---------- 184
           + PN   F I    L + G L EA ++LD+                + RI          
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMA 245

Query: 185 -------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
                  G   N  +YN ++  LC +G+V+EA+ +LM +      PDV +Y+ V+DG+C 
Sbjct: 246 IKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH 305

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           +G   +A++L+++   +G+ PN  T+N++    CK G   +   +L+ M  +  +PD + 
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLEDAY 355
           Y+TL++G  K G +R A   F EM+      D     +L++G     K  E ++L     
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL----- 420

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
             F +M  +    D  TY  +I    K  +   A    +  ++MG  P  +T+  +I  L
Sbjct: 421 --FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 416 CGEGKIDKALLLL 428
           C  G++D A  LL
Sbjct: 479 CKHGELDTANELL 491



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 120/252 (47%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++ D ++K G   +V  +N ++  +      E A+K   E    G+ P++ T++ +I  Y
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   D  +A K++  M D G  P V TF +L+N  C  G L++   +L  M   G  P+ 
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L+K  C    +    ++   ++N G+ PD  TY  ++ G CK     EA  L  E
Sbjct: 609 ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKE 668

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            IE+G  P V ++N L   + K+   ++   L + M+    + D   Y+  ++   + G 
Sbjct: 669 MIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGD 728

Query: 311 IRPAVSIFKEMV 322
           +   +++  E +
Sbjct: 729 VEITLNLCDEAI 740



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 39/286 (13%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           E   A    +E    G+ PN  T+  +I   C   +   A +++D M   G   NV  + 
Sbjct: 448 EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYN 507

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            +VN +CK+G +++A++++ +M   G  P+  TY  ++   C +G +++A+++L  + + 
Sbjct: 508 SMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDR 567

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL------------- 266
           GL+P V T+  +M+GFC +G   +   LL   +E+G+ P+ +T+NTL             
Sbjct: 568 GLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTT 627

Query: 267 ----------------------FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
                                   G+CK     +   L K M ++  +P   SY+ L+  
Sbjct: 628 TKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKR 687

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             K  KI  A  +F+EM   G   D  + N  +  +C   +EE D+
Sbjct: 688 FYKKKKILEARELFEEMRGHGLVADGEIYNFFV-DMC---YEEGDV 729


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 201/423 (47%), Gaps = 24/423 (5%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + ID FD + +    ++  D N ++   V +N  + A+  + +     +  N ++F+I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL---------- 175
           +I+C+C+ +    +      +   G+ P+V TF  L++ LC   R+ EAL          
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 176 -----EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
                 + DQM  IG  P + T+N L+ GLC  GRV EA  ++  +   GL  DV TY  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           +++G CK+G +  A+ LL++  E  + P+VV ++ + +  CK+G       L   M ++ 
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             P+  +Y+ +++G   +G+   A  + ++M+      D    N+L+      S +E  L
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA----SVKEGKL 382

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
            E A ++ ++M  +    D  TY  +I    K  + D+A     H  ++   P  +TFN 
Sbjct: 383 FE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNT 437

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I   C   ++D+ + LL  +     + + T+Y+ LI    +++    A  L+   +  G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497

Query: 471 VIP 473
           V P
Sbjct: 498 VCP 500



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 180/402 (44%), Gaps = 38/402 (9%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           AV  F +    GL P   TF+ +I   C +    EA  +++ M   G H +V T+  +VN
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            +CK G  K AL +L +M     KP++  Y+ ++  LC  G   +A  +   +   G+ P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V+TY  ++DGFC  GR ++A  LL + IER + P+V+TFN L +   KEG   +   L 
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF------------------------- 318
             M  R   PD ++Y++++ G  K  +   A  +F                         
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449

Query: 319 ------KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
                 +E+ R G   +    N+L+ G C     E D L  A  +F++M       D  T
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFC-----EVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIP-RTITFNNVIQALCGEGKIDKALLLLFLM 431
             I++    + +K +EAL  L   I+M  I   T+ +N +I  +C   K+D+A  L   +
Sbjct: 505 CNILLYGFCENEKLEEAL-ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             H   P   +Y+++I+         DA  L+      G  P
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 193/425 (45%), Gaps = 39/425 (9%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + +FD + + G    V  FN L+  L +      A    ++    GL  +  T+  ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C   D   A  ++  M +    P+V  ++ +++ LCK G   +A  +  +M   G  
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN+ TYNC++ G C  GR  +A  +L ++    + PDV T+ A++    K G+  EA +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 248 LNEAIERGV-------------------------------TPNVVTFNTLFNGYCKEGTP 276
            +E + R +                               +P+VVTFNT+ + YC+    
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            +G+ LL+ + +R  + +  +Y+TL++G  +   +  A  +F+EM+  G   D    N L
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           L G C     E + LE+A ++FE +       D   Y I+I  + KG K DEA       
Sbjct: 509 LYGFC-----ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT---KLDQL 453
              G  P   T+N +I   CG+  I  A +L   M ++   P  ++Y+ LI    K  ++
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623

Query: 454 EKSYD 458
           +KS +
Sbjct: 624 DKSIE 628



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 164/329 (49%), Gaps = 9/329 (2%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
               A   FSE    G+APN +T++ MI  +C+   + +A++++  M +   +P+V TF 
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L+++  K G+L EA ++ D+M      P+  TYN ++ G C   R ++A  M   + + 
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS- 429

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
              PDV T+  ++D +C+  R +E M+LL E   RG+  N  T+NTL +G+C+       
Sbjct: 430 ---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             L + M      PD I+ + LL G  +  K+  A+ +F+ +     ++D    N ++ G
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           +C  S      +++A+ +F  +       D  TY ++I          +A +  H   + 
Sbjct: 547 MCKGSK-----VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLL 428
           GH P   T+N +I+     G+IDK++ L+
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELI 630



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 158/354 (44%), Gaps = 10/354 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  + + G   +V  +N ++           A +   +     + P+  TF+ +I    
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +   FEA K+ D M      P+  T+  ++   CK  R  +A  + D M      P++ 
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVV 433

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+N ++   C   RV+E  ++L  +   GL  +  TY  ++ GFC+V   N A +L  E 
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I  GV P+ +T N L  G+C+     + + L ++++      D ++Y+ +++G+ K  K+
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +F  +   G E D +  N ++ G C KS      + DA  +F KM       D  
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA-----ISDANVLFHKMKDNGHEPDNS 608

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           TY  +IR   K  + D+++  +      G      T   ++  L  +G++DK+ 
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLDKSF 661



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 109/221 (49%), Gaps = 1/221 (0%)

Query: 43  LDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
            DL  +P  +     +D   +A  + E + +   I + G   + + +N L+     ++  
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
             A   F E  S+G+ P++ T +I++  +C      EA ++ + +  +    +   + I+
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ +CK  ++ EA ++   +   G +P++QTYN ++ G C    + +A  +   +K++G 
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           +PD  TY  ++ G  K G  ++++EL++E    G + +  T
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 202/421 (47%), Gaps = 31/421 (7%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D    +   G   +V  +N L+   V + + E A          G+  N  T +++I+ 
Sbjct: 238 VDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKG 297

Query: 130 YCNKNDFFEARKVIDCM-FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
           YC +    EA KV+  M    G   +   + +L++  C+  ++ +A+ + D+M  +G + 
Sbjct: 298 YCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRM 357

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N+   N L+ G C  G+V EA  +LM + +  L+P+ Y+Y+ +MDGFC+ G   +A+ + 
Sbjct: 358 NLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVY 417

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           NE +  G+  NVVT N+L  G C+ G     + +  LM KR   PD++SY TLL+ L K 
Sbjct: 418 NEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKM 477

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC----MKSWEE-----KDL--------- 350
           G+   A++++ +++  G+       N+++ G C    M   EE     K+L         
Sbjct: 478 GEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTY 537

Query: 351 ------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
                       +E+A++V EKM K+  +     Y  +I  L K KKT E +  L     
Sbjct: 538 RTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCL 597

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G  P  +T+  +I   C EG++DKA    F M E    P+      +++ L +L +  +
Sbjct: 598 KGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDE 657

Query: 459 A 459
           A
Sbjct: 658 A 658



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 196/410 (47%), Gaps = 6/410 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K  + +FD++ K G   S+   N LL +LV   E   A+  +   +  G+ P+ +T SI
Sbjct: 164 IKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSI 223

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           M+  YC       A   +  M   G+  NV T+  L++     G ++ A  VL  MG  G
Sbjct: 224 MVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERG 283

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-KNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
              N  T   L+KG C   ++EEA ++L  + +++G+  D Y Y  ++DG+C+V + ++A
Sbjct: 284 ILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDA 343

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           + L +E +  G+  N+   N L NGYCK G   +   LL  M   +  P+  SYSTL++G
Sbjct: 344 VRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDG 403

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             + G +  A+S++ EM+R G + +    NSLL+GLC          EDA  V+  M K+
Sbjct: 404 FCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLC-----RVGAFEDALHVWHLMLKR 458

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  +Y  ++  L K  +   AL   +  +  G+   T  FN +I   C   K+ +A
Sbjct: 459 GVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEA 518

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
                 M E    P   +Y  LI    +L    +A  +     K+ ++P 
Sbjct: 519 EETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPS 568



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 209/476 (43%), Gaps = 36/476 (7%)

Query: 35  ASLSTAESL-----DLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDF 88
             +S AE L     D    P S      +D   +   + + I +++ + + G   +V   
Sbjct: 373 GQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTH 432

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N LL  L  +   E A+  +      G+ P+  ++  ++       +FF A  + + +  
Sbjct: 433 NSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILA 492

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            GY  +   F  ++N  CK  ++ EA E  ++M  +G +P+  TY  L+ G C +G VEE
Sbjct: 493 RGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEE 552

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A+++   ++ + + P +  Y +++ G  K  ++ E M+LL+E   +G++PNVVT+ TL  
Sbjct: 553 AFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIA 612

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G+C EG   K       M ++   P+ I  S +++ L + G+I  A  + ++MV     +
Sbjct: 613 GWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFL 672

Query: 329 DE------------------------------RMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           D                                + NS++  + +    +   ++DA ++F
Sbjct: 673 DHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIF 732

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
             +  +    D  TY  +I         ++A       ++ G  P  IT+N +I  LC  
Sbjct: 733 SSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKS 792

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           G +D+A  L   ++     P+  SY++LI    +   + +A  L    LK+G+ P 
Sbjct: 793 GNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPS 848



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 165/329 (50%), Gaps = 5/329 (1%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           + + AV+   E  + GL  N +  + +I  YC      EA +++  M D    P   +++
Sbjct: 339 KMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYS 398

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L++  C+ G + +A+ V ++M R+G + N+ T+N LLKGLC VG  E+A  +   +   
Sbjct: 399 TLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKR 458

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G+ PD  +Y  ++D   K+G    A+ L N+ + RG   +   FNT+ NG+CK    ++ 
Sbjct: 459 GVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEA 518

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
                 MK+    PD ++Y TL++G  K G +  A  + ++M +        + NSL+ G
Sbjct: 519 EETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGG 578

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           L  KS + +++++    +  +M  K    +  TYG +I       + D+A       IE 
Sbjct: 579 L-FKSKKTREVMD----LLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEK 633

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLL 428
           G  P  I  + ++ +L   G+ID+A +LL
Sbjct: 634 GFAPNVIICSKIVSSLYRLGRIDEANMLL 662



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 171/397 (43%), Gaps = 40/397 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +++ I   G   S   FN ++     + +   A + F+     G  P+  T+  +I  YC
Sbjct: 486 LWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYC 545

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +  EA KV + M      P++  +  L+  L KS + +E +++L +M   G  PN+ 
Sbjct: 546 KLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVV 605

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+ G C  GR+++A+    ++   G  P+V   + ++    ++GR +EA  LL + 
Sbjct: 606 TYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM 665

Query: 252 IERGV-----------------------------------TPNVVTFNTLFNGYCKEGTP 276
           +   V                                    PN V +N    G CK G  
Sbjct: 666 VNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKV 725

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                +   +  R   PD  +Y TL++G    G +  A S+  EM++ G   +    N+L
Sbjct: 726 DDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNAL 785

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           + GLC KS      L+ A ++F+K+  K    +  +Y I+I    K   T EAL   +  
Sbjct: 786 INGLC-KSGN----LDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKM 840

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
           ++ G  P  IT++ +I   C +G + KA  LL  M E
Sbjct: 841 LKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRE 877



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 161/353 (45%), Gaps = 38/353 (10%)

Query: 44  DLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQE 102
           +L   P  +  +  +D   K   ++E   + + ++K+    S+  +N L+  L    +  
Sbjct: 527 ELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTR 586

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
             +   SE    GL+PN  T+  +I  +C++    +A      M + G+ PNV   + +V
Sbjct: 587 EVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIV 646

Query: 163 NSLCKSGRLKEA-----------------------------------LEVLDQMGRIGCK 187
           +SL + GR+ EA                                    + LD+  +    
Sbjct: 647 SSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSL 706

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN   YN  + GLC  G+V++A ++  ++   G  PD +TY  ++ G+   G  N+A  L
Sbjct: 707 PNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSL 766

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E ++RG+ PN++T+N L NG CK G   +   L   +  +   P+ ISY+ L++G  K
Sbjct: 767 RDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCK 826

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS--WEEKDLLEDAYQVF 358
            G  R A+ +  +M++ G        ++L+ G C +    +  +LL++  ++F
Sbjct: 827 NGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELF 879



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 122/224 (54%), Gaps = 1/224 (0%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           L+ Q+ A      + S+ L PNS  ++I I   C      +A+K+   +   G+ P+  T
Sbjct: 688 LDSQKIADTLDESSKSFSL-PNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFT 746

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           +  L++    +G + +A  + D+M + G  PNI TYN L+ GLC  G ++ A ++   + 
Sbjct: 747 YCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLH 806

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             GL P+V +Y  ++DG+CK G + EA++L N+ ++ G++P+++T++ L  G+CK+G   
Sbjct: 807 LKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMG 866

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           K   LL  M++     +   +  L+ G +K G+++    +   M
Sbjct: 867 KATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 155/320 (48%), Gaps = 6/320 (1%)

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
           T F +++   C+ G +K AL V D MG++GC P++++ N LL  L   G    A  +  +
Sbjct: 149 TVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDH 208

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +   G+ PDV+T + +++ +CK G  N A++ + E    G   NVVT+N+L +G    G 
Sbjct: 209 INRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGD 268

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-GFEVDERMMN 334
             +   +LKLM +R  L +K++ + L+ G  +  K+  A  + +EM R  G  +DE    
Sbjct: 269 MERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYG 328

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            L+ G C         ++DA ++ ++M       +      +I    K  +  EA   L 
Sbjct: 329 VLIDGYCRVCK-----MDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLM 383

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
             ++    P + +++ ++   C EG + KA+ +   M       +  +++ L+  L ++ 
Sbjct: 384 RMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVG 443

Query: 455 KSYDACALYGAALKQGVIPQ 474
              DA  ++   LK+GV P 
Sbjct: 444 AFEDALHVWHLMLKRGVTPD 463



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 178/378 (47%), Gaps = 14/378 (3%)

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
           +LV+ NE    V+ F +   +  +P    F ++++ YC K     A  V D M   G  P
Sbjct: 130 SLVVWNE---LVRVFED---FKFSPT--VFDMILKIYCEKGMIKNALHVFDNMGKLGCVP 181

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           ++ +   L++SL + G    A+ V D + R+G  P++ T + ++   C  G V  A + +
Sbjct: 182 SLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFV 241

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +   G + +V TY +++DG   +G    A  +L    ERG+  N VT   L  GYC++
Sbjct: 242 KEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQ 301

Query: 274 GTPMKGVGLLKLMKK-RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
               +   +L+ M++    + D+ +Y  L++G  +  K+  AV +  EM+  G  ++  +
Sbjct: 302 CKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFI 361

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N+L+ G C     +   + +A ++  +M       +  +Y  ++    +     +A+  
Sbjct: 362 CNALINGYC-----KNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISV 416

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            +  + +G     +T N++++ LC  G  + AL +  LM +    P   SY  L+  L +
Sbjct: 417 YNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFK 476

Query: 453 LEKSYDACALYGAALKQG 470
           + + + A AL+   L +G
Sbjct: 477 MGEFFRALALWNDILARG 494



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 9/221 (4%)

Query: 72  IFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
           I D++ +   ++S+ +   +N  +  L    + + A K FS     G +P+++T+  +I 
Sbjct: 693 IADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIH 752

Query: 129 CYC---NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            Y    N ND F  R   D M   G  PN+ T+  L+N LCKSG L  A ++ D++   G
Sbjct: 753 GYSAAGNVNDAFSLR---DEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKG 809

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ +YN L+ G C  G   EA ++   +  +G+ P + TY+A++ GFCK G   +A 
Sbjct: 810 LAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKAT 869

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            LL+E  E     N+  F  L  G+ K G   K   L  +M
Sbjct: 870 NLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 71/146 (48%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + +   + D + K G   ++  +N L+  L      + A K F +    GLAPN  +
Sbjct: 757 AGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVIS 816

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I  YC   +  EA  + + M   G  P++ T++ L+   CK G + +A  +LD+M 
Sbjct: 817 YNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMR 876

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEE 208
            +    NI  +  L++G    G V++
Sbjct: 877 ELFADQNIAKFVKLVEGHVKCGEVKK 902


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 183/379 (48%), Gaps = 5/379 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S  +    L ++    +  T V   ++   +G+A N +T +I+I   C  +    A  V+
Sbjct: 85  SFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVL 144

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             MF  G  P+  TFT L+N LC  GR+KEA+E+ ++M      PN  T+  L+  LC  
Sbjct: 145 SKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKK 204

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G V EA  +   +   G++P++YTY A+M+G+C     N+A ++    + +G  P+V ++
Sbjct: 205 GMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSY 264

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           + L NGYCK     +   LL  M ++  +P+ ++Y+TL+ GL     +  A  +FK+M  
Sbjct: 265 SILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCS 324

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   + R  + LL GLC         LE+A ++   M ++    D   Y I+I+ +   
Sbjct: 325 SGMLPNLRTYSILLDGLCKHGH-----LEEALKLLTSMQERKLEPDIVLYNILIQGMFIA 379

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            K + A          G  P   T+N +I+ L  EG  D+A  L   M +   +P   SY
Sbjct: 380 GKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSY 439

Query: 444 DMLITKLDQLEKSYDACAL 462
           +++I    Q +    A  L
Sbjct: 440 NVIIQGFLQNQDPSTAIQL 458



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 215/470 (45%), Gaps = 34/470 (7%)

Query: 1   MSSLVPSN--SFIFTNTNRRNHN------KIPQFNKLVV--------FAAASLSTAESLD 44
           M  L+P +  SF+F+N +  N +       +PQ N   V           A  S    + 
Sbjct: 20  MGILLPPDFPSFLFSNHHHLNTSTCTKKPSLPQNNGGFVSNNSNDIGIDDAMASFYRMIH 79

Query: 45  LKENPRSLQAQRFVDRIKAS-------PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM 97
           +   P  ++  +F+  I           L  ++D+F     D T       N L+ +L  
Sbjct: 80  MNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYT------LNILINSLCR 133

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           L+    AV   S+    G+ P+S TF+ +I   CN+    EA ++ + M      PN  T
Sbjct: 134 LSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVT 193

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           FTILV+ LCK G + EA  V + M   G +PNI TYN L+ G C    + +A ++   + 
Sbjct: 194 FTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMV 253

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G  P V++Y+ +++G+CK  R +EA  LL +  E+ + PN VT+NTL  G C   + +
Sbjct: 254 GKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLL 313

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   L K M     LP+  +YS LL+GL K G +  A+ +   M     E D  + N L+
Sbjct: 314 EAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILI 373

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
           +G+ +        LE A ++F K+          TY I+I+ L K   +DEA        
Sbjct: 374 QGMFIAGK-----LEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKME 428

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           + G +P + ++N +IQ          A+ L+  M         +++ ML+
Sbjct: 429 DDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 167/343 (48%), Gaps = 17/343 (4%)

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           CN+ D F            G   N  T  IL+NSLC+   +  A+ VL +M ++G +P+ 
Sbjct: 109 CNQMDLF------------GVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDS 156

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            T+  L+ GLC  GR++EA E+   +      P+  T+T ++D  CK G  +EA  +   
Sbjct: 157 VTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFET 216

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             E+GV PN+ T+N L NGYC          + ++M  + C P   SYS L+NG  K  +
Sbjct: 217 MTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRR 276

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I  A ++  +M       +    N+L++GLC  S     LLE A ++F+KM     + + 
Sbjct: 277 IDEAKALLTQMSEKELIPNTVTYNTLMQGLCHAS----SLLE-AQELFKKMCSSGMLPNL 331

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY I++  L K    +EAL  L    E    P  + +N +IQ +   GK++ A  L   
Sbjct: 332 RTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSK 391

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++ +   PS  +Y+++I  L +   S +A  L+      G +P
Sbjct: 392 LFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLP 434



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 122/232 (52%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ +   G   SV  ++ L+         + A    ++ S   L PN+ T++ +++  C
Sbjct: 248 VFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLC 307

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           + +   EA+++   M  +G  PN+ T++IL++ LCK G L+EAL++L  M     +P+I 
Sbjct: 308 HASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIV 367

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            YN L++G+   G++E A E+   +  +G++P V TY  ++ G  K G S+EA +L  + 
Sbjct: 368 LYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKM 427

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
            + G  P+  ++N +  G+ +   P   + L+  M  R    D  ++  LL+
Sbjct: 428 EDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 108/264 (40%), Gaps = 40/264 (15%)

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +P        +    K  + +  + L N+    GV  N  T N L N  C+       V 
Sbjct: 83  RPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVS 142

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM---------VRFGFEVD--- 329
           +L  M K    PD ++++TL+NGL   G+I+ AV +F EM         V F   VD   
Sbjct: 143 VLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLC 202

Query: 330 ------------ERMM-----------NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
                       E M            N+L+ G C++       + DA +VFE M  K  
Sbjct: 203 KKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLE-----MNDASKVFEIMVGKGC 257

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                +Y I+I    K ++ DEA   L    E   IP T+T+N ++Q LC    + +A  
Sbjct: 258 APSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQE 317

Query: 427 LLFLMYEHAKIPSRTSYDMLITKL 450
           L   M     +P+  +Y +L+  L
Sbjct: 318 LFKKMCSSGMLPNLRTYSILLDGL 341



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 5/232 (2%)

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++AM      I     P+ V          K+      V L   M       +  + + L
Sbjct: 68  DDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNIL 127

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +N L +   I  AVS+  +M + G + D     +L+ GLC      +  +++A ++F +M
Sbjct: 128 INSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLC-----NEGRIKEAVELFNEM 182

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             + ++ +  T+ I++  L K     EA        E G  P   T+N ++   C   ++
Sbjct: 183 AGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEM 242

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + A  +  +M      PS  SY +LI    +  +  +A AL     ++ +IP
Sbjct: 243 NDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIP 294



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/101 (22%), Positives = 50/101 (49%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L+   ++F  +  +G   SV  +N ++  L+     + A K F +    G  P+S +
Sbjct: 379 AGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCS 438

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           ++++I+ +    D   A ++ID M    +  + +TF +L++
Sbjct: 439 YNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 194/402 (48%), Gaps = 19/402 (4%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETAV- 105
           R   A R    ++  PL E   +  ++       SV D   +N +L AL      + A+ 
Sbjct: 24  RGEAAARLNRHLRLLPLPESPALLSALP------SVRDAVSYNTVLAALCRQGCLDAALF 77

Query: 106 --KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
             +  S        PN+ +++ ++R  C      +A  ++  M D G  P+V T+  L+ 
Sbjct: 78  LLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIR 137

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LC +  +  A+E+L++M   G +PN+  Y+CLL G C  GR E   ++   +   G++P
Sbjct: 138 GLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEP 197

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV  YTA++D  C+ G+  +A  +++   ERG+ PNVVT+N L N  CKEG+  + + L 
Sbjct: 198 DVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLR 257

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM--NSLLRGLC 341
           K M ++   PD ++Y+TL+ GL    ++  A+++ +EM++    V   +M  NS++ GLC
Sbjct: 258 KNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLC 317

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
              W     +  A QV   M +     +   + ++I  L +  K  +A+  +      G 
Sbjct: 318 KIGW-----MRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGL 372

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            P + T++ +I   C   ++++A   L  M      P    Y
Sbjct: 373 QPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHY 414



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 182/387 (47%), Gaps = 8/387 (2%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A+ +   +++ + + + G   +V  ++ LL         E+  K F E S  G+ P+   
Sbjct: 142 AADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVM 201

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I   C      +A +V+D M + G  PNV T+ +L+NS+CK G ++EAL++   M 
Sbjct: 202 YTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMS 261

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEML--MNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             G +P++ TYN L+ GL  V  ++EA  +L  M      ++PD+ T+ +V+ G CK+G 
Sbjct: 262 EKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGW 321

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A+++     E G   N+V FN L  G  +     K + L+  M      PD  +YS 
Sbjct: 322 MRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSI 381

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NG  K  ++  A S   EM   G E +      LL+ +C     ++ ++  A  +F +
Sbjct: 382 LINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMC-----DQGMMGQARDLFNE 436

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +   + D   Y  +I    K  +   A   L   I+ G IP  +T++  I      G 
Sbjct: 437 MDRNCKL-DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGD 495

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +  A  +L  M     +P    +D LI
Sbjct: 496 LAAAERVLKQMTASGFVPDVAVFDSLI 522



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 166/326 (50%), Gaps = 12/326 (3%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMG---RIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           +  ++  ++ +LC+ G L  AL +L  M    R+  +PN  +Y  L++ LC   R  +A 
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L ++++ G++PDV TY  ++ G C     + A+ELLNE  E G+ PNVV ++ L +GY
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 271 CKEGTPMKGVG-LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           CK G   + VG + + M  R   PD + Y+ L++ L + GK++ A  +   M   G E +
Sbjct: 175 CKTGR-WESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPN 233

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N L+  +C     ++  + +A  + + M++K    D  TY  +I  L    + DEA
Sbjct: 234 VVTYNVLINSMC-----KEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEA 288

Query: 390 LIHLHHAI--EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +  L   +  E    P  +TFN+VI  LC  G + +AL +  +M E+    +  ++++LI
Sbjct: 289 MALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLI 348

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L ++ K   A  L       G+ P
Sbjct: 349 GGLLRVHKVKKAMELMDEMASSGLQP 374



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 150/345 (43%), Gaps = 38/345 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE--ASSYGLAPN 119
           K   ++E +D+  ++ + G    V  +N L+  L  + E + A+    E       + P+
Sbjct: 246 KEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPD 305

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             TF+ +I   C      +A +V   M +NG   N+  F +L+  L +  ++K+A+E++D
Sbjct: 306 LMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMD 365

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M   G +P+  TY+ L+ G C + +VE A   L  +++ G++P+   Y  ++   C  G
Sbjct: 366 EMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQG 425

Query: 240 RSNEAMELLNEA----------------------------------IERGVTPNVVTFNT 265
              +A +L NE                                   I+ G+ P+ VT++ 
Sbjct: 426 MMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSI 485

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
             N + K G       +LK M     +PD   + +L+ G    G     + + +EM    
Sbjct: 486 PINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKD 545

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
             +D +++++++  L   S E + LL+ +   F+    K  V  P
Sbjct: 546 VALDPKIISTIVTSLG-ASIEGQKLLQ-SLPGFDTEISKGDVISP 588


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 232/479 (48%), Gaps = 40/479 (8%)

Query: 26  FNKLVVFAAASLSTAESLDLKE-------NPRSLQAQRFVDRI-KASPLKERIDIFDSIK 77
           ++K++ F   ++   ++  L +       NP        +D   KA  +++    FD ++
Sbjct: 291 YSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMR 350

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
             G + +V  +  LL A +   +   A   F+     G  PN+ T+S ++   C   +  
Sbjct: 351 SIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQ 410

Query: 138 EARKVIDCMF---DN--------GYH-----PNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +A +V   +    DN        G H     PNV T+  L++ LCK+ ++ +A E+LD M
Sbjct: 411 KACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAM 470

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC+PN   Y+ L+ G C VG+++ A E+ + +   G  P V+TYT+++D   K  R 
Sbjct: 471 LSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRL 530

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + AM++L++ +E   TPNVVT+  + +G C+ G   K + LL +M+++ C P+ ++Y+ L
Sbjct: 531 DLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTAL 590

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K GK+  ++ +F +M   G   +      L+   C        LL++A+ +  +M
Sbjct: 591 IDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAG-----LLDEAHSLLSEM 645

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +         Y  V++  G  KK   +L  L      G +P    +  +I      G++
Sbjct: 646 KQTYWPKYLQGYCSVVQ--GFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRL 703

Query: 422 DKALLLLFLMYEHAK---IPSRTSYDMLITKL---DQLEKSYDACALYGAALKQGVIPQ 474
           ++AL L   M E +    I S+  Y  LI  L    QLEK+++   LY    ++GV+P+
Sbjct: 704 EEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFE---LYSEITRKGVVPE 759



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 187/433 (43%), Gaps = 52/433 (12%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I + + K+G N + S FN L+ +     +   A K     +  G  P    ++I I   C
Sbjct: 164 IINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSIC 223

Query: 132 NKNDFFE------ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
              +         A KV + M  +    N          LC  G+   A +++  M   G
Sbjct: 224 GGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKG 283

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY+ ++  LC   +VE+A+ +   +K+ G+ PDVYTYT ++D FCK G   +A 
Sbjct: 284 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQAR 343

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
              +E    G + NVVT+  L + Y K     +   +   M    C P+ I+YS L++GL
Sbjct: 344 SWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGL 403

Query: 306 LKWGKIRPAVSIFKEMV--------RFGFE---VDERMMN-----SLLRGLC--MKSWEE 347
            K G+I+ A  ++ +++         F FE    D    N     +L+ GLC   K  + 
Sbjct: 404 CKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDA 463

Query: 348 KDLL----------------------------EDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           ++LL                            ++A +VF +M+K   +    TY  +I  
Sbjct: 464 QELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDA 523

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           + K ++ D A+  L   +E    P  +T+  +I  LC  G+  KAL LL +M E    P+
Sbjct: 524 MFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPN 583

Query: 440 RTSYDMLITKLDQ 452
             +Y  LI  L +
Sbjct: 584 VVTYTALIDGLGK 596



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 164/406 (40%), Gaps = 62/406 (15%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A+ F          PN  T+  ++  +  K      +++I+ M   G +PN + F  L
Sbjct: 124 DEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSL 183

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN--------------------------- 194
           V+S C +     A ++L +M   GC P    YN                           
Sbjct: 184 VHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEE 243

Query: 195 -----CLL---------KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
                C+L         + LC +G+ + A++++  +   G  PD  TY+ V+   C+  +
Sbjct: 244 MLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMK 303

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  L  E    GV P+V T+  L + +CK G   +       M+   C  + ++Y+ 
Sbjct: 304 VEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTA 363

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LL+  LK  ++  A  IF  M+  G   +    ++L+ GLC K+ E    ++ A +V+ K
Sbjct: 364 LLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLC-KAGE----IQKACEVYTK 418

Query: 361 MT--------------KKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
           +               K      P   TYG +I  L K  K  +A   L   +  G  P 
Sbjct: 419 LIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPN 478

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            I ++ +I   C  GKID A  +   M +   +P+  +Y  LI  +
Sbjct: 479 HIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAM 524



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 137/322 (42%), Gaps = 16/322 (4%)

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           E   +G  P+  T++ +++            +V   M ++G+  +  T      +LCK G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           R  +AL +++   R   K +      ++ GL      +EA   L  ++ +   P+V TY 
Sbjct: 90  RWSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++ GF K  +      ++N  ++ G  PN   FN+L + YC          LLK M   
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 290 NCLPDKISYSTLLNGLLKWGKIRP-------AVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
            C P  ++Y+  + G +  G+  P       A  +++EM+     +++    +  R LC 
Sbjct: 207 GCPPGYVAYNIFI-GSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLC- 264

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
                    + A+Q+ + M  K  V D  TY  VI  L +  K ++A +       +G  
Sbjct: 265 ----GMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVN 320

Query: 403 PRTITFNNVIQALCGEGKIDKA 424
           P   T+  +I + C  G I++A
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQA 342



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/226 (21%), Positives = 101/226 (44%), Gaps = 36/226 (15%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           ++ + +   +++ G + +V  +  L+  L    + + +++ F + S+ G APN  T+ ++
Sbjct: 566 QKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVL 625

Query: 127 IRCYCNKNDFFEARKVID--------------CMFDNGYH-------------------P 153
           I   C      EA  ++               C    G+                    P
Sbjct: 626 INHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVP 685

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT---YNCLLKGLCYVGRVEEAY 210
               + +L+++  K+GRL+EALE+  +M  +    NI +   Y  L++ LC   ++E+A+
Sbjct: 686 IAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAF 745

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           E+   +   G+ P++  +  ++ G  KV + NEA++L     + GV
Sbjct: 746 ELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 85/225 (37%), Gaps = 36/225 (16%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +  ++  L  + E + A+K  S     G +PN  T++ +I           + ++ 
Sbjct: 548 NVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLF 607

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI------------------- 184
             M   G  PN  T+ +L+N  C +G L EA  +L +M +                    
Sbjct: 608 IQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKK 667

Query: 185 --------------GCKPNIQTYNCLLKGLCYVGRVEEAYEM---LMNVKNDGLKPDVYT 227
                         G  P    Y  L+      GR+EEA E+   +M + +         
Sbjct: 668 FIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDM 727

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           YT+++   C   +  +A EL +E   +GV P +  F  L  G  K
Sbjct: 728 YTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIK 772


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 182/375 (48%), Gaps = 8/375 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A     E    G +P+  +  ++IR +     F      +D M + G  PN   +  L++
Sbjct: 13  AEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLIS 72

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK+G L EA   L +M +  C PN+ +YN ++ G C    +E+A   L  ++  G  P
Sbjct: 73  CLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPP 131

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
             + Y++++  FCK G  ++AM++  E   +G  P++V FN L +G  +     +   L 
Sbjct: 132 TPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELF 191

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           + M  R C PD ++Y+T++ GL KW K+  AV + + M +           +L+  LC  
Sbjct: 192 RSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKF 251

Query: 344 SWEEKDLLEDAYQVFEKMTK-KVSVTDPG-TYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
           +      L+ AY+VFEKM +     T+P  +  I+I  L K ++  EA          G 
Sbjct: 252 AR-----LQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGI 306

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P  +T+N +++ L    K+  A+ L + M +    P+  +Y++LI+ L + ++  +A  
Sbjct: 307 SPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFK 366

Query: 462 LYGAALKQGVIPQRK 476
           L  A   +G +P  K
Sbjct: 367 LLSAMRDKGFVPSLK 381



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 171/345 (49%), Gaps = 14/345 (4%)

Query: 88  FNDLLMALV---MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +N+L+  L    ML E E+ +K   +      APN  +++I+I  YC   +  +A   + 
Sbjct: 67  YNNLISCLCKAGMLAEAESYLKRMPQHC----APNVVSYNIIIDGYCKARNIEKALAFLR 122

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M + G+ P    ++ +V S CK+G + +A++V  +M   GC+P+I  +N LL GL    
Sbjct: 123 EMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRAR 182

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           ++ EA E+  ++ + G KPDV TY  ++ G CK  + +EA+ LL    +  V+P  VT+ 
Sbjct: 183 KIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYT 242

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST--LLNGLLKWGKIRPAVSIFKEMV 322
           TL +  CK     +   + + M +  C   + +YS   L+NGL K  +   A  +F+EM 
Sbjct: 243 TLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMR 302

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
             G        N+LL GL   +      L+DA ++   M  +V   +  TY I+I +L K
Sbjct: 303 GRGISPTVVTYNTLLEGLLSTAK-----LQDAMELTYFMLDQVPAPNMFTYEILISSLCK 357

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
             + +EA   L    + G +P    +  ++  L   G++D A  L
Sbjct: 358 TDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFEL 402



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 158/360 (43%), Gaps = 42/360 (11%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A+ F  E    G  P    +S +++ +C   +  +A  V   M   G  P++  F +L
Sbjct: 115 EKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVL 174

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ L ++ ++ EA E+   M   GCKP++ TYN ++ GLC   +++EA  +L  +K + +
Sbjct: 175 LSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDV 234

Query: 222 KPDVYTYTAVMD-------------------------------------GFCKVGRSNEA 244
            P   TYT ++D                                     G CK  R  EA
Sbjct: 235 SPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEA 294

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            E+  E   RG++P VVT+NTL  G          + L   M  +   P+  +Y  L++ 
Sbjct: 295 KEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISS 354

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K  ++  A  +   M   GF    ++   LL  L          L+DA++++++M++ 
Sbjct: 355 LCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLA-----RAGRLDDAFELYKEMSRI 409

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
                 G+  I++  + +    DEA   L    + G +P   T++ ++  LC +GK D+A
Sbjct: 410 NCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQA 469



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 155/370 (41%), Gaps = 47/370 (12%)

Query: 33  AAASLSTAESLDLKENPRSLQA--QRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           A A L   E L     P +  +  Q F    K   + + +D+F  +   G    + +FN 
Sbjct: 117 ALAFLREMEELGHPPTPHAYSSIVQSFC---KTGNVSKAMDVFAEMPAKGCEPDIVNFNV 173

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           LL  L    +   A + F   +S G  P+  T++ MI   C      EA  +++ M    
Sbjct: 174 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 233

Query: 151 YHPNVTTFT-------------------------------------ILVNSLCKSGRLKE 173
             P   T+T                                     IL+N LCK+ R  E
Sbjct: 234 VSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGE 293

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A E+  +M   G  P + TYN LL+GL    ++++A E+   + +    P+++TY  ++ 
Sbjct: 294 AKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILIS 353

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             CK  +  EA +LL+   ++G  P++  +  L +   + G       L K M + NC  
Sbjct: 354 SLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQ 413

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
              S + LL+G+L+ G +  A    K+M   G   D+   + L+ GLC   W+ K   + 
Sbjct: 414 LVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLC---WQGK--ADQ 468

Query: 354 AYQVFEKMTK 363
           A ++ E++ +
Sbjct: 469 ARKLVEELVR 478



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 106/194 (54%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA    E  ++F  ++  G + +V  +N LL  L+   + + A++          APN +
Sbjct: 287 KARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMF 346

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ I+I   C  +   EA K++  M D G+ P++  + +L++ L ++GRL +A E+  +M
Sbjct: 347 TYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEM 406

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            RI C+  + + N LL G+   G V+EA + L  + + G+ PD +TY  ++ G C  G++
Sbjct: 407 SRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKA 466

Query: 242 NEAMELLNEAIERG 255
           ++A +L+ E +  G
Sbjct: 467 DQARKLVEELVRDG 480



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 9/256 (3%)

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           V +A  ++  +K  G  PDV ++  ++ GF K G        L+  +E G+ PN + +N 
Sbjct: 10  VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +  CK G   +    LK M + +C P+ +SY+ +++G  K   I  A++  +EM   G
Sbjct: 70  LISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELG 128

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   +S+++  C      K     A  VF +M  K    D   + +++  L + +K
Sbjct: 129 HPPTPHAYSSIVQSFCKTGNVSK-----AMDVFAEMPAKGCEPDIVNFNVLLSGLWRARK 183

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             EA          G  P  +T+N +I  LC   K+D+A+ LL  M +    P+  +Y  
Sbjct: 184 IHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTT 243

Query: 446 LI---TKLDQLEKSYD 458
           LI    K  +L+++Y+
Sbjct: 244 LIDHLCKFARLQQAYE 259



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 1/101 (0%)

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
           E DL+  A  + E+M       D  ++ ++IR   K          L   +E G  P  I
Sbjct: 6   EADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAI 65

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            +NN+I  LC  G + +A   L  M +H   P+  SY+++I
Sbjct: 66  LYNNLISCLCKAGMLAEAESYLKRMPQHCA-PNVVSYNIII 105


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 187/382 (48%), Gaps = 8/382 (2%)

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           L  L+   E E   +F    ++ G  P+    + +IR +C       A +++  + ++G 
Sbjct: 76  LCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGA 135

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
             +  ++ +L+N+ CKSG ++EAL VLD        PN  TY+ +L  LC  G++++A +
Sbjct: 136 VIDANSYNVLINAYCKSGEIEEALRVLDHTS---VAPNAATYDAVLCSLCDRGKLKQAMQ 192

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +L         PDV T T ++D  CK     +AM+L NE   +G  P+VVT+N L  G+C
Sbjct: 193 VLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFC 252

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           KEG   + +  LK +    C  D IS++ +L  L   G+   A+ +   M+R G      
Sbjct: 253 KEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVV 312

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             N L+  LC     +K LL  A  V E M K     +  ++  +I+     K  D A+ 
Sbjct: 313 TFNILINFLC-----QKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIE 367

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
           HL   +  G  P  +T+N ++ ALC +GK+D A+++L  +      PS  SY+ +I  L 
Sbjct: 368 HLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLL 427

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           ++ K+  A  L      +G+ P
Sbjct: 428 KVGKAELAVELLEEMCYKGLKP 449



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 194/416 (46%), Gaps = 43/416 (10%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K    I   +++ G     + +N L+ A     E E A++     S   +APN+ T+  +
Sbjct: 121 KNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTS---VAPNAATYDAV 177

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +   C++    +A +V+D    +  +P+V T T+L+++ CK   + +A+++ ++M   GC
Sbjct: 178 LCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGC 237

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           KP++ TYN L+KG C  GR++EA   L  + + G + DV ++  ++   C  GR  +AM+
Sbjct: 238 KPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMK 297

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK------------------ 288
           LL   + +G  P+VVTFN L N  C++G   K + +L++M K                  
Sbjct: 298 LLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFC 357

Query: 289 -----------------RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
                            R C PD ++Y+ LL  L K GK+  AV I  ++   G      
Sbjct: 358 NRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLI 417

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             N+++ GL +K  +     E A ++ E+M  K    D  T   V+  L +  K  EA+ 
Sbjct: 418 SYNTVIDGL-LKVGKA----ELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIK 472

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             H+    G  P    +N+++  LC   +   A+  L  M  +   P+  SY  LI
Sbjct: 473 FFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLI 528



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 190/413 (46%), Gaps = 8/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+   L+E     + +   G    V     L+     +   + A +        G   ++
Sbjct: 80  IRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDA 139

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++++I  YC   +  EA +V+D        PN  T+  ++ SLC  G+LK+A++VLD+
Sbjct: 140 NSYNVLINAYCKSGEIEEALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDR 196

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             +  C P++ T   L+   C    V +A ++   ++  G KPDV TY  ++ GFCK GR
Sbjct: 197 QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGR 256

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+  L +    G   +V++ N +    C  G  M  + LL  M ++ C P  ++++ 
Sbjct: 257 LDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNI 316

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+N L + G +  A+++ + M + G   + R  N L++G C +       ++ A +  E 
Sbjct: 317 LINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKG-----IDRAIEHLEI 371

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +    D  TY I++  L K  K D+A++ L      G  P  I++N VI  L   GK
Sbjct: 372 MVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGK 431

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            + A+ LL  M      P   +   ++  L +  K ++A   +      G+ P
Sbjct: 432 AELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKP 484



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 162/302 (53%), Gaps = 10/302 (3%)

Query: 50  RSLQAQRFVDRI----------KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           R LQ++ + D +          K S + + + +F+ ++  G    V  +N L+       
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
             + A+ F  +  SYG   +  + ++++R  C+   + +A K++  M   G  P+V TF 
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           IL+N LC+ G L +AL VL+ M + G  PN +++N L++G C    ++ A E L  + + 
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSR 375

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G  PD+ TY  ++   CK G+ ++A+ +L++   +G +P+++++NT+ +G  K G     
Sbjct: 376 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 435

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           V LL+ M  +   PD I+ ++++ GL + GK+  A+  F  +  FG + +  + NS++ G
Sbjct: 436 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMG 495

Query: 340 LC 341
           LC
Sbjct: 496 LC 497



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 133/259 (51%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +  ++ + G   SV  FN L+  L        A+        +G  PNS +F+ +I
Sbjct: 294 DAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLI 353

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           + +CN+     A + ++ M   G +P++ T+ IL+ +LCK G++ +A+ +L Q+   GC 
Sbjct: 354 QGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCS 413

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++ +YN ++ GL  VG+ E A E+L  +   GLKPD+ T T+V+ G  + G+ +EA++ 
Sbjct: 414 PSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKF 473

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +     G+ PN   +N++  G CK       +  L  M    C P + SY+TL+ G+  
Sbjct: 474 FHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITY 533

Query: 308 WGKIRPAVSIFKEMVRFGF 326
            G    A  +  E+   G 
Sbjct: 534 EGLAEEASKLSNELYSRGL 552



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 74/160 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + I   +   G + S+  +N ++  L+ + + E AV+   E    GL P+  
Sbjct: 393 KDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLI 452

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T + ++     +    EA K    +   G  PN   +  ++  LCK+ +   A++ L  M
Sbjct: 453 TCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDM 512

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
              GCKP   +Y  L+KG+ Y G  EEA ++   + + GL
Sbjct: 513 VANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGL 552


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 193/398 (48%), Gaps = 6/398 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L++  +++  + + G     S +  L+  L  +   + A K             + 
Sbjct: 22  KAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAI 81

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +S +I   C  N   EAR++I+ M      P+  T+  +V  LCK+ R+ +AL  +++M
Sbjct: 82  AYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEM 140

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP+   YN +L GLC   +VEEA  +   +    + P+V TY  +++G CK  R 
Sbjct: 141 ATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRI 200

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A EL  E   +G  P  V++NTL +G+CK+   +    +   M + NC+P+ ++Y+TL
Sbjct: 201 ETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTL 260

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K GK++ A  +   MV+ G   +    + L+ G C     +   +++A+++ E+M
Sbjct: 261 IDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFC-----KVRRVDEAHKLLEQM 315

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +       TY I++ +L +  K ++A        +    P  +T+N +++ALC   ++
Sbjct: 316 VTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQL 375

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           D A  L   M      P   +YD L   L +  K ++A
Sbjct: 376 DGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEA 413



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 183/390 (46%), Gaps = 6/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
             + FN +          E   + +      G    +  + I+I C C   +F EA K++
Sbjct: 9   GAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLL 68

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M    +      ++ ++N LCK  R++EA E++++M R    P+  TY  +++ LC  
Sbjct: 69  HTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKT 127

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            R+++A   +  +   G+KPD + Y  V+ G C+  +  EA  L  + +++ + PNVVT+
Sbjct: 128 KRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTY 187

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           NTL NG CK         L K M  +  +P ++SY+TL++G  K   +  A  +F +MVR
Sbjct: 188 NTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR 247

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                +     +L+ GL      +   ++ A +V + M KK    +  TY  +I    K 
Sbjct: 248 SNCVPNVVTYTTLIDGL-----SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           ++ DEA   L   +  G  P  +T+N ++ +LC   K++ A  L   M +    P+  +Y
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 362

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + L+  L   ++   A  LY   + +G  P
Sbjct: 363 NTLLRALCHHKQLDGAHRLYAEMIAKGCPP 392



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 170/346 (49%), Gaps = 6/346 (1%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P + TF+ +   +       + ++V   M + GY    + + IL++ LCK G   EA ++
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L  M     K     Y+ ++  LC + RVEEA E++  +      PD  TY  +++  CK
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCK 126

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R ++A+  + E   RG+ P+   +N + +G C+E    +   L + M K+   P+ ++
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+TL+NGL K  +I  A  +FKEM   G+   E   N+L+ G C K    KDL+  A  V
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK----KDLVA-AKDV 241

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           F+KM +   V +  TY  +I  L K  K   A   L   ++ G  P   T++ +I   C 
Sbjct: 242 FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 301

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             ++D+A  LL  M      P+  +Y++L+  L + +K  DA  L+
Sbjct: 302 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 347



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 149/307 (48%), Gaps = 3/307 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P +L     V+R+ K   + + +   + +   G       +N +L  L    + E A   
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 171

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F +     + PN  T++ +I   C       A ++   M   GY P   ++  L++  CK
Sbjct: 172 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 231

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              L  A +V D+M R  C PN+ TY  L+ GL   G+V+ A E+L  +   G+ P+V T
Sbjct: 232 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 291

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y+ ++DGFCKV R +EA +LL + + +G+ P VVT+N L N  C+         L + M 
Sbjct: 292 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 351

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSW 345
           +R C P  ++Y+TLL  L    ++  A  ++ EM+  G   D    ++L  GL    K  
Sbjct: 352 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 411

Query: 346 EEKDLLE 352
           E ++L+E
Sbjct: 412 EAQELME 418



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 6/220 (2%)

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           R V P   TFNT+ +G+ K G   +   + + M +         Y  L++ L K G    
Sbjct: 4   RRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDE 63

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A  +   M    F+      ++++  LC     + + +E+A ++ EKM  + +  D  TY
Sbjct: 64  AYKLLHTMRLKRFKRKAIAYSTIINWLC-----KLNRVEEARELIEKMA-RYAPPDALTY 117

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
           G ++  L K K+ D+AL  +      G  P    +N V+  LC E K+++A LL   M +
Sbjct: 118 GPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVK 177

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               P+  +Y+ LI  L +  +   A  L+     +G +P
Sbjct: 178 QRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVP 217


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 186/408 (45%), Gaps = 28/408 (6%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V+ F+ L+  L      + A+  F E +  G+ P+++T+ ++I   C      +A ++ 
Sbjct: 195 NVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLF 254

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M D+G  P+  T   L+N  C   R+ EA  +L    + G   +++ Y+CL++GL   
Sbjct: 255 DKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRA 314

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            R E+   +   +  D +KPDVY YT +M G  + G+  +A+ELLNE  E GV P+ V +
Sbjct: 315 KRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCY 374

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N L  G+C  G   +   L   + + +C P+  +YS L++G+ + G  R A  IF EM +
Sbjct: 375 NVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEK 434

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM-------------TKKVSVTDP 370
            G        NSL+ GLC     +   LE A+ +F KM                  V D 
Sbjct: 435 LGCYPSAVTFNSLIDGLC-----KTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDS 489

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEM-----GHIPRTITFNNVIQALCGEGKIDKAL 425
            +   ++  L      D  LIH  + I M     G  P   T+N ++   C  G  + A 
Sbjct: 490 ASLQKMVEQL-----CDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAY 544

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L   M      P   +Y  LI  L + ++  DA  ++    K G  P
Sbjct: 545 KLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTP 592



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 183/367 (49%), Gaps = 6/367 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
            +++K  G       F  L+   + +   + A++ F     +   P+ +T+++++     
Sbjct: 114 LEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQ 173

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           KN    A  V   M      PNV TF+IL++ LCKSG +K+AL + D+M + G  P+  T
Sbjct: 174 KNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFT 233

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y  ++ GLC   RV++AY +   +K+ G+ PD  T  A+++GFC + R +EA  LL    
Sbjct: 234 YCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFE 293

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           + G   +V  ++ L  G  +         L + M + N  PD   Y+ ++ GL + GK+R
Sbjct: 294 KDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVR 353

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A+ +  EM   G   D    N L++G C     +  LL +A  +  ++++     +  T
Sbjct: 354 DALELLNEMTESGVVPDTVCYNVLIKGFC-----DMGLLSEARSLQLEISRHDCFPNVKT 408

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y I+I  + +   T +A    +   ++G  P  +TFN++I  LC  G+++KA LL + M 
Sbjct: 409 YSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM- 467

Query: 433 EHAKIPS 439
           E  + PS
Sbjct: 468 EIGRNPS 474



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/447 (23%), Positives = 204/447 (45%), Gaps = 63/447 (14%)

Query: 52  LQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA 111
            +A+R+ D      L  R  I D++K D   +++     ++  L    +   A++  +E 
Sbjct: 312 FRAKRYED----VQLLYRKMIEDNVKPDVYLYTI-----MMKGLAEAGKVRDALELLNEM 362

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           +  G+ P++  ++++I+ +C+     EAR +   +  +   PNV T++IL++ +C++G  
Sbjct: 363 TESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLT 422

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA---------------------- 209
           ++A E+ ++M ++GC P+  T+N L+ GLC  G++E+A                      
Sbjct: 423 RDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQG 482

Query: 210 --------------------------YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
                                     Y +LM + + G  P +YTY  +++GFCK+G  N 
Sbjct: 483 PSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNG 542

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A +L  E   +G++P+ VT+ TL NG  +         +   M+K  C PD   Y T++ 
Sbjct: 543 AYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMT 602

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
            + +  ++  A S++ + +R     ++  + ++      + + EK  +E A +   +M  
Sbjct: 603 WMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAI------EGYFEKQEVEKAVRGLLEMDF 656

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           K++  D G Y I +  L + ++  EAL       E   +        +I  L  EG +D+
Sbjct: 657 KLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDR 716

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKL 450
           A+ +     E   +  R   + ++TKL
Sbjct: 717 AIDVFLYTIEKGYLLRRRVANRILTKL 743



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 5/288 (1%)

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           ++ + L     L+   + L+ +   G K +   +  L+K    +G  ++A E   ++++ 
Sbjct: 96  LITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDF 155

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
              PDVYTY  ++D   +      A+ +    ++    PNV TF+ L +G CK G     
Sbjct: 156 DCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDA 215

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + L   M +R  LPD  +Y  +++GL +  ++  A  +F +M   G   D    N+LL G
Sbjct: 216 LHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNG 275

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
            CM      D +++A+ +     K   V D   Y  +IR L + K+ ++  +     IE 
Sbjct: 276 FCM-----LDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIED 330

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              P    +  +++ L   GK+  AL LL  M E   +P    Y++LI
Sbjct: 331 NVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLI 378


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 203/412 (49%), Gaps = 6/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   +  FD +   G   +V  +  L+       +   A + + E +  G+APN++
Sbjct: 448 KLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTY 507

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I      N   +A ++ D M +    PN  T+ +++   CK G   +A E+L+QM
Sbjct: 508 TFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQM 567

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P+  TY  L+  LC  GRV EA + + ++  +  K +   Y+A++ G+CK GR 
Sbjct: 568 VQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRL 627

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ +  E ++RGV  ++V +  L +G  KE       GLLK M  +   PDK+ Y+++
Sbjct: 628 RDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSM 687

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K G ++ A  I+  M+  G   +     +L+  LC     +  L++ A  ++++M
Sbjct: 688 IDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELC-----KAGLMDKAELLWKEM 742

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
               S  +  TY   +  L +    ++A + LH+ +  G +  T+++N +++  C  G++
Sbjct: 743 LVSNSTPNHVTYCCFLDHLAREGSMEKA-VQLHNDMLKGLLANTVSYNILVRGFCKLGRV 801

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++A  LL  M ++A  P   +Y  +I +  +      A   +   L +G+ P
Sbjct: 802 EEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKP 853



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 180/383 (46%), Gaps = 5/383 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           +  D+ + +KK G   S+  +N L+ +L    + + A   F E    GL  N  T+SI+I
Sbjct: 349 DAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILI 408

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             +C +     A   +  M   G    V  +  L+N  CK G L  A+   D+M   G K
Sbjct: 409 DSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLK 468

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P + +Y  L+ G C  G++ EA+ +   +   G+ P+ YT+T ++    +  R  +A  L
Sbjct: 469 PTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRL 528

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E +E+ + PN VT+N +  G+CKEG  +K   LL  M ++  +PD  +Y  L++ L  
Sbjct: 529 FDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCS 588

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G++  A     ++ R  F+++E   ++LL G C     ++  L DA  V  +M K+   
Sbjct: 589 TGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYC-----KEGRLRDALGVCREMVKRGVD 643

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D   Y ++I    K + T      L +  +    P  + + ++I      G + KA  +
Sbjct: 644 MDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGI 703

Query: 428 LFLMYEHAKIPSRTSYDMLITKL 450
             +M +    P+  +Y  LI +L
Sbjct: 704 WDIMIDEGCTPNIVTYTTLINEL 726



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 196/434 (45%), Gaps = 51/434 (11%)

Query: 52  LQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA 111
           +Q +R  D +    L  + ++   ++  G         ++L  L  +   +  +  F E 
Sbjct: 169 VQEKRMFDSVLIFRLMRQCELMPQVRTLG---------EVLNGLAKIRRVDMVLVLFGEI 219

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
            S G+ P+ + +  +IR +C   +F +A+++I  M  +    NV  + +L++ LCK+ R+
Sbjct: 220 LSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRV 277

Query: 172 KEALE-----------------------------------VLDQMGRIGCKPNIQTYNCL 196
            EA+E                                   V+D+M  +G  P     + L
Sbjct: 278 WEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSL 337

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           ++GL   G+V +A++++  VK  G  P ++ Y A+++  CK G+ +EA  L  E  E+G+
Sbjct: 338 VEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGL 397

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
             N VT++ L + +C+ G     +  L  M           Y++L+NG  K G +  AVS
Sbjct: 398 CANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVS 457

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
            F EM+  G +       SL+ G C      K  L +A++++ +MT K    +  T+  +
Sbjct: 458 FFDEMIDKGLKPTVVSYTSLISGYC-----NKGKLHEAFRLYHEMTGKGIAPNTYTFTTL 512

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I  L +  +  +A       +E   +P  +T+N +I+  C EG   KA  LL  M +   
Sbjct: 513 ISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGL 572

Query: 437 IPSRTSYDMLITKL 450
           +P   +Y  LI+ L
Sbjct: 573 VPDTYTYRPLISSL 586



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 192/396 (48%), Gaps = 7/396 (1%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           + + ++ +V  +N L+  L        AV+  +     GL  +  T+  ++   C   +F
Sbjct: 253 RMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEF 312

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
                V+D M + G+ P     + LV  L + G++ +A ++++++ ++G  P++  YN L
Sbjct: 313 EVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNAL 372

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           +  LC  G+ +EA  +   +   GL  +  TY+ ++D FC+ G+ + A+  L + I  G+
Sbjct: 373 INSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGI 432

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
              V  +N+L NG+CK G     V     M  +   P  +SY++L++G    GK+  A  
Sbjct: 433 KITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFR 492

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           ++ EM   G   +     +L+  L        + + DA+++F++M ++  + +  TY ++
Sbjct: 493 LYHEMTGKGIAPNTYTFTTLISALF-----RANRMTDAFRLFDEMLEQNMMPNEVTYNVM 547

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL-FLMYEHA 435
           I    K   T +A   L+  ++ G +P T T+  +I +LC  G++ +A   +  L  EH 
Sbjct: 548 IEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHF 607

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           K+ +   Y  L+    +  +  DA  +    +K+GV
Sbjct: 608 KL-NEMCYSALLHGYCKEGRLRDALGVCREMVKRGV 642



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 181/397 (45%), Gaps = 8/397 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E ++I + + + G   S   +  L++ L  + E E       E    G  P     S ++
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                K    +A  +++ +   G  P++  +  L+NSLCK G+  EA  +  +MG  G  
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            N  TY+ L+   C  G+++ A   L  +   G+K  VY Y ++++G CK+G  + A+  
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSF 458

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E I++G+ P VV++ +L +GYC +G   +   L   M  +   P+  +++TL++ L +
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFR 518

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
             ++  A  +F EM+      +E   N ++ G C +    K     A+++  +M +K  V
Sbjct: 519 ANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK-----AFELLNQMVQKGLV 573

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  TY  +I +L    +  EA   +            + ++ ++   C EG++  AL +
Sbjct: 574 PDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGV 633

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
              M +         Y +LI   D   K  D  A++G
Sbjct: 634 CREMVKRGVDMDLVCYAVLI---DGTIKEQDTSAVFG 667



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 120/244 (49%), Gaps = 3/244 (1%)

Query: 98  LNEQETAVKF--FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV 155
           + EQ+T+  F          L P+   ++ MI  Y       +A  + D M D G  PN+
Sbjct: 657 IKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNI 716

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
            T+T L+N LCK+G + +A  +  +M      PN  TY C L  L   G +E+A + L N
Sbjct: 717 VTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQ-LHN 775

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
               GL  +  +Y  ++ GFCK+GR  EA +LL+E I+  + P+ +T++T+    C+ G 
Sbjct: 776 DMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGN 835

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
               +     M  +   PD ++Y+ L+ G    G++  A  +  +M+R G + ++    S
Sbjct: 836 LDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKS 895

Query: 336 LLRG 339
           L  G
Sbjct: 896 LSHG 899



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 174/387 (44%), Gaps = 17/387 (4%)

Query: 87  DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           +FN   M+  +L         F  ASS          ++++R   +  + FEA  ++DC 
Sbjct: 100 NFNHSTMSFCILIHALVNANLFWPASS-------LLQTLLLRGGLDPREVFEA--LLDC- 149

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
           F+     +   F +L+ S  +  R+ +++ +   M +    P ++T   +L GL  + RV
Sbjct: 150 FEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRV 209

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +    +   + + G++PD+Y Y AV+  FC++    +A E++       +  NVV +N L
Sbjct: 210 DMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVL 267

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G CK     + V +   + ++     +++Y TL+ GL K  +      +  EM+  GF
Sbjct: 268 IHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGF 327

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
              E  ++SL+ GL       K  + DA+ +  ++ K  ++     Y  +I +L K  K 
Sbjct: 328 VPTEAALSSLVEGL-----RRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKF 382

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           DEA +      E G     +T++ +I + C  GK+D A+  L  M       +   Y+ L
Sbjct: 383 DEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSL 442

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I    +L     A + +   + +G+ P
Sbjct: 443 INGHCKLGNLSAAVSFFDEMIDKGLKP 469



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 1/208 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +K+   I+D +  +G   ++  +  L+  L      + A   + E       PN  
Sbjct: 693 KAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHV 752

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+   +     +    +A ++ + M   G   N  ++ ILV   CK GR++EA ++LD+M
Sbjct: 753 TYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEM 811

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P+  TY+ ++   C  G ++ A E    + N GLKPD   Y  ++ G C  G  
Sbjct: 812 IDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGEL 871

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNG 269
            +A EL ++ I RGV PN  T  +L +G
Sbjct: 872 GKAFELRDDMIRRGVKPNQATHKSLSHG 899


>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
          Length = 567

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 168/303 (55%), Gaps = 8/303 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           +N ++       + E+A   F    S     PN  T++ +I  YC K +  EA+K ++ M
Sbjct: 229 YNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEM 288

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            + G  PN  T+  ++  LC +GR+ EA  ++ +M   G K N+ T+  +LKGLC VG+ 
Sbjct: 289 MNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKF 348

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           ++A   L NV    + PDV +Y  V++GFCK+G+S+EA+ LL E   RG+ P V +FN +
Sbjct: 349 DQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAV 408

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL-LKWGKIRPAVSIFKEMVRFG 325
           F    + G   + + LLK M + +CLP+ +SY+T++ GL +  G+++    +   M+R G
Sbjct: 409 FRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSG 468

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL-GKGK 384
             +D  M + LL+G C     E+  +E+  Q+  +M  K  V    ++ ++++ L  KGK
Sbjct: 469 HNLDFTMYSCLLKGYC-----EEGNVENVMQIAHEMVTKKYVIGLESFSVLVKQLCAKGK 523

Query: 385 KTD 387
            T+
Sbjct: 524 VTE 526



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 210/460 (45%), Gaps = 31/460 (6%)

Query: 20  HNKIPQFNKL--VVFAAASLSTAESLDLKENPRSLQAQRFVDR-IKA----SPLKERIDI 72
           H+  P +  +  V+ + + +S A SL    N  S     F+ + IKA      +K  I  
Sbjct: 89  HHTTPCYTAITDVLLSHSLISIAASLLKNSNKLS---DFFISKLIKAYGDRGNVKAAIFW 145

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP-NSWTFSIMIRCYC 131
           F   K+      +  +N LL  LV +N  + A +FF +     + P +  T++ MIR YC
Sbjct: 146 FHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYC 205

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNI 190
                  A+KV D M      PN+  +  ++N  CK G ++ A  V D+M     C PN 
Sbjct: 206 KMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNH 262

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  L+ G C  G +EEA + +  + N G +P+  TY A++ G C  GR +EA  L+ +
Sbjct: 263 VTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 322

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G   NV T  ++  G C  G   + VG L+ + + N  PD  SY  ++NG  K GK
Sbjct: 323 MRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 382

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
              A+S+ KEM   G +      N++ R L      E   L+ A  + ++M +   + + 
Sbjct: 383 SDEAISLLKEMRARGLKPTVFSFNAVFRILV-----ENGELDRAILLLKQMPQMDCLPNF 437

Query: 371 GTYGIVIRTL--GKGKKTD-EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            +Y  +I  L   KG+  D E L+     I  GH      ++ +++  C EG ++  + +
Sbjct: 438 VSYNTIICGLCMAKGRMQDVEDLVD--RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQI 495

Query: 428 LFLMYEHAKIPSRTSYDMLIT------KLDQLEKSYDACA 461
              M     +    S+ +L+       K+ + EK +D C+
Sbjct: 496 AHEMVTKKYVIGLESFSVLVKQLCAKGKVTEAEKLFDTCS 535



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 165/376 (43%), Gaps = 52/376 (13%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID---CMFDNGYHPNVTTFTI 160
           A+ FF+ AS+    PN +  +    CY    D   +  +I     +  N    +    + 
Sbjct: 71  ALFFFNWASNPNPNPNKYHHTT--PCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISK 128

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VKND 219
           L+ +    G +K A+    Q  +I     + +YN LL  L  V  ++ A E     VK +
Sbjct: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            + PDV TYT ++ G+CK+G    A ++ +      V PN++ +NT+ NG+CK+G  M+ 
Sbjct: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGD-MES 244

Query: 280 VGLL--KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
             L+  ++M   +CLP+ ++Y+TL++G  K G++  A     EM+  G   +E   N+++
Sbjct: 245 ARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMI 304

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
                                              YG+ I       + DEA + +    
Sbjct: 305 -----------------------------------YGLCI-----NGRVDEAKMLMAKMR 324

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             G      T  ++++ LC  GK D+A+  L  + E    P   SY+++I    ++ KS 
Sbjct: 325 LNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSD 384

Query: 458 DACALYGAALKQGVIP 473
           +A +L      +G+ P
Sbjct: 385 EAISLLKEMRARGLKP 400


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 198/447 (44%), Gaps = 40/447 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E + +   ++K G   +   +N L+  L    E E A +   E    GL  +++
Sbjct: 202 KQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAY 261

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +IR YC K    EA ++ + M   G  P + T+  ++  LCK GR+ +A ++LD M
Sbjct: 262 TYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVM 321

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P++ +YN L+ G   +G + EA+ +   ++  GL P V TY  ++DG C++G  
Sbjct: 322 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDL 381

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT-------------------------- 275
           + AM L +E I+ G  P+V TF  L  G+CK G                           
Sbjct: 382 DVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITR 441

Query: 276 ---------PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
                    P K  G+ + M  R   PD I+Y+  ++GL K G ++ A  + K+M+  G 
Sbjct: 442 IVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGL 501

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             D     S++    M        L  A  VF +M  K       TY ++I +     + 
Sbjct: 502 VPDHVTYTSIIHAHLMAGH-----LRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRL 556

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
             A++H     E G  P  IT+N +I  LC   K+D+A      M      P++ +Y +L
Sbjct: 557 KLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTIL 616

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I +   L    +A  LY   L + + P
Sbjct: 617 INENCNLGHWQEALRLYKDMLDREIQP 643



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 194/405 (47%), Gaps = 35/405 (8%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE-ARKVIDCMFDNGYHPNVTTFTI 160
           E  +  F +  S G+ P+    + ++R   +++   + AR+V + M + G  P V T+  
Sbjct: 136 EKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNT 195

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           +++S CK G+++EAL++L QM ++GC PN  TYN L+ GL + G +E+A E++  +   G
Sbjct: 196 MLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLG 255

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           L+   YTY  ++ G+C+ G+ +EA  L  E + RG  P +VT+NT+  G CK G      
Sbjct: 256 LEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDAR 315

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            LL +M  +N +PD +SY+TL+ G  + G I  A  +F E+   G        N+L+ GL
Sbjct: 316 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGL 375

Query: 341 C---------------MKSWEEKDL---------------LEDAYQVFEKMTKKVSVTDP 370
           C               +K   + D+               L  A ++F++M  +     P
Sbjct: 376 CRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNR--GLQP 433

Query: 371 GTYGIVIRTLGKGKKTD--EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             +  + R +G+ K  D  +A       +  G  P  IT+N  I  L   G + +A  L+
Sbjct: 434 DRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELV 493

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M  +  +P   +Y  +I           A A++   L +G+ P
Sbjct: 494 KKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFP 538



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 210/462 (45%), Gaps = 34/462 (7%)

Query: 44  DLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET 103
           DLK   R L+  R  D    S +    ++++ + + G   +V  +N +L +     + + 
Sbjct: 153 DLKNCNRVLRLLRDRD----SSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQE 208

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++   +    G  PN  T+++++    +  +  +A+++I  M   G   +  T+  L+ 
Sbjct: 209 ALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIR 268

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             C+ G+L EA  + ++M   G  P + TYN ++ GLC  GRV +A ++L  + N  L P
Sbjct: 269 GYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMP 328

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D+ +Y  ++ G+ ++G   EA  L  E   RG+ P+VVT+NTL +G C+ G     + L 
Sbjct: 329 DLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLK 388

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE-----RMMNSLLR 338
             M K    PD  +++ L+ G  K G +  A  +F EM+  G + D      R++  L  
Sbjct: 389 DEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 448

Query: 339 GLCMKSW--EEKDL-----------------------LEDAYQVFEKMTKKVSVTDPGTY 373
           G   K++  +E+ L                       L++A ++ +KM     V D  TY
Sbjct: 449 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 508

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             +I          +A       +  G  P  +T+  +I +    G++  A+L  F M+E
Sbjct: 509 TSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 568

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
               P+  +Y+ LI  L ++ K   A   +     +G+ P +
Sbjct: 569 KGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNK 610



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 50  RSLQAQRF------VDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET 103
           R LQ  RF      V  +K     +   + + +   G    +  +N  +  L  L   + 
Sbjct: 429 RGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKE 488

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A +   +    GL P+  T++ +I  +       +AR V   M   G  P+V T+T+L++
Sbjct: 489 ASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIH 548

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           S    GRLK A+    +M   G  PN+ TYN L+ GLC V ++++AY+    ++  G+ P
Sbjct: 549 SYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISP 608

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
           + YTYT +++  C +G   EA+ L  + ++R + P+  T + L     K+
Sbjct: 609 NKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKD 658



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 112/237 (47%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++FD +   G       +   ++  + L +   A     E  + G  P+  T+++ I   
Sbjct: 421 ELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 480

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
               +  EA +++  M  NG  P+  T+T ++++   +G L++A  V  +M   G  P++
Sbjct: 481 HKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSV 540

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  L+      GR++ A      +   G+ P+V TY A+++G CKV + ++A +   E
Sbjct: 541 VTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTE 600

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
              +G++PN  T+  L N  C  G   + + L K M  R   PD  ++S LL  L K
Sbjct: 601 MQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 15/201 (7%)

Query: 57  FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           F+D + K   LKE  ++   +  +G       +  ++ A +M      A   F E  S G
Sbjct: 476 FIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKG 535

Query: 116 LAPNSWTFSIMIRCYCNKN-------DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS 168
           + P+  T++++I  Y  +         FFE       M + G HPNV T+  L+N LCK 
Sbjct: 536 IFPSVVTYTVLIHSYAVRGRLKLAILHFFE-------MHEKGVHPNVITYNALINGLCKV 588

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
            ++ +A +   +M   G  PN  TY  L+   C +G  +EA  +  ++ +  ++PD  T+
Sbjct: 589 RKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTH 648

Query: 229 TAVMDGFCKVGRSNEAMELLN 249
           +A++    K  +S+    L N
Sbjct: 649 SALLKHLNKDYKSHVVRHLEN 669



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 3/178 (1%)

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
           +++Y+ +L+ L + G +R A  + +++V    E     +  L   L +  + +K +LE  
Sbjct: 81  ELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWI--YAKKSMLEKC 138

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTL-GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
             VF KM  K  + D      V+R L  +    D A    +  +E G  P  +T+N ++ 
Sbjct: 139 LLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLD 198

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           + C +GK+ +AL LL  M +   +P+  +Y++L+  L    +   A  L    L+ G+
Sbjct: 199 SFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGL 256


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 206/401 (51%), Gaps = 10/401 (2%)

Query: 75  SIKKDGTNWSVSD-FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           + K  G++  V D F  +L+   +LNE   A KFF +  +YG+A ++ + ++ + C  +K
Sbjct: 31  TYKDWGSDPHVFDVFFQVLVEAGLLNE---ARKFFDKLLNYGVALSAGSCNLYLTCLSSK 87

Query: 134 NDFFE-ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
            D      KV       G   N  ++ IL+NSL + G+++EA  +L +M   GC P++ +
Sbjct: 88  RDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVS 147

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y  ++ G C+VG +++  +++  ++  GLKP++YTY++++   CK G+  E  ++L E +
Sbjct: 148 YTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMM 207

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           +RGV P+ V + TL +G+CK G       L   M+ R  +PD I++S L+ GL   GK+ 
Sbjct: 208 KRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVV 267

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A  +F EM++ GFE DE    +L+ G C K  E    ++ A+ +  +M +     +  T
Sbjct: 268 EADKLFNEMIKKGFEPDEVTYTALIDGYC-KLGE----MKKAFFLHNQMVQIGLTPNVVT 322

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y  +   L K  + D A   LH     G      T+N ++  LC  G I +A+ L+  M 
Sbjct: 323 YTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMK 382

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           E    P   +Y  L+    +  +   A  L    L +G+ P
Sbjct: 383 EAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQP 423



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 199/404 (49%), Gaps = 5/404 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +F    + G  W+   +N L+ +L  L +   A          G  P+  +++ +I  
Sbjct: 95  LKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDG 154

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC+  +  +  +++  M   G  PN+ T++ ++  LCKSG++ E  +VL +M + G  P+
Sbjct: 155 YCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPD 214

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
              Y  L+ G C +G  + AY++   ++   + PD   ++A++ G    G+  EA +L N
Sbjct: 215 HVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFN 274

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E I++G  P+ VT+  L +GYCK G   K   L   M +    P+ ++Y+ L +GL K G
Sbjct: 275 EMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSG 334

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A  +  EM R G +++    N+++ GLC    +  ++L+ A ++ E+M +     D
Sbjct: 335 ELDTANELLHEMCRKGLQLNISTYNTIVNGLC----KAGNILQ-AVKLMEEMKEAGLHPD 389

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  ++    K  +  +A   L   ++ G  P  +TFN ++  LC  GK++    LL 
Sbjct: 390 TITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLK 449

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M E   +P+  +Y+ ++ +         +  +Y     QGV+P
Sbjct: 450 WMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVP 493



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 169/340 (49%), Gaps = 5/340 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           F+ L+  L    +   A K F+E    G  P+  T++ +I  YC   +  +A  + + M 
Sbjct: 253 FSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMV 312

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PNV T+T L + LCKSG L  A E+L +M R G + NI TYN ++ GLC  G + 
Sbjct: 313 QIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNIL 372

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A +++  +K  GL PD  TYT +MD + K G   +A ELL E ++RG+ P VVTFN L 
Sbjct: 373 QAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLM 432

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG C  G    G  LLK M ++  +P+  +Y++++        +R +  I++ M   G  
Sbjct: 433 NGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVV 492

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    N L++G C     +   +++A+ + ++M +K       +Y  +I+   K KK  
Sbjct: 493 PDSNTYNILIKGHC-----KARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLL 547

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
           EA          G +     +N  +     EG ++  L L
Sbjct: 548 EARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLEL 587



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 175/360 (48%), Gaps = 5/360 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+     L   + A K FSE  +  + P+S  FS +I          EA K+ + M 
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G+ P+  T+T L++  CK G +K+A  + +QM +IG  PN+ TY  L  GLC  G ++
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELD 337

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A E+L  +   GL+ ++ TY  +++G CK G   +A++L+ E  E G+ P+ +T+ TL 
Sbjct: 338 TANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           + Y K G  +K   LL+ M  R   P  ++++ L+NGL   GK+     + K M+  G  
Sbjct: 398 DAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIM 457

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +    NS+++  C+     ++ +  + +++  M  +  V D  TY I+I+   K +   
Sbjct: 458 PNAATYNSIMKQYCI-----RNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMK 512

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA       +E        ++N +I+      K+ +A  L   M     + S   Y++ +
Sbjct: 513 EAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFV 572



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 195/424 (45%), Gaps = 40/424 (9%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +  ++     + E +  V+   E    GL PN +T+S +I   C      E  KV+ 
Sbjct: 145 VVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLR 204

Query: 145 CMFDNGYHPNVTTFTILVNSLCK-----------------------------------SG 169
            M   G  P+   +T L++  CK                                   SG
Sbjct: 205 EMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSG 264

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           ++ EA ++ ++M + G +P+  TY  L+ G C +G +++A+ +   +   GL P+V TYT
Sbjct: 265 KVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYT 324

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           A+ DG CK G  + A ELL+E   +G+  N+ T+NT+ NG CK G  ++ V L++ MK+ 
Sbjct: 325 ALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEA 384

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD I+Y+TL++   K G++  A  + +EM+  G +      N L+ GLCM       
Sbjct: 385 GLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGK---- 440

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            LED  ++ + M +K  + +  TY  +++          +          G +P + T+N
Sbjct: 441 -LEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYN 499

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I+  C    + +A  L   M E     + +SY+ LI    + +K  +A  L+    ++
Sbjct: 500 ILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRRE 559

Query: 470 GVIP 473
           G++ 
Sbjct: 560 GLVA 563



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 132/273 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K+   + + + + G   +V  +  L   L    E +TA +   E    GL  N  
Sbjct: 297 KLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIS 356

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C   +  +A K+++ M + G HP+  T+T L+++  K+G + +A E+L +M
Sbjct: 357 TYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREM 416

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P + T+N L+ GLC  G++E+   +L  +   G+ P+  TY ++M  +C     
Sbjct: 417 LDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNM 476

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             + E+      +GV P+  T+N L  G+CK     +   L K M ++       SY+ L
Sbjct: 477 RISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNAL 536

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
           + G  K  K+  A  +F+EM R G      + N
Sbjct: 537 IKGFFKRKKLLEARQLFEEMRREGLVASAEIYN 569



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 119/261 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  L    ++   + + G   ++S +N ++  L        AVK   E    GL P++ 
Sbjct: 332 KSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTI 391

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  Y    +  +AR+++  M D G  P V TF +L+N LC SG+L++   +L  M
Sbjct: 392 TYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWM 451

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN  TYN ++K  C    +  + E+   +   G+ PD  TY  ++ G CK    
Sbjct: 452 LEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNM 511

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L  E +E+       ++N L  G+ K    ++   L + M++   +     Y+  
Sbjct: 512 KEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLF 571

Query: 302 LNGLLKWGKIRPAVSIFKEMV 322
           ++   + G +   + +  E +
Sbjct: 572 VDMNYEEGNMETTLELCDEAI 592



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 82/175 (46%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   +V  FN L+  L M  + E   +        G+ PN+ T++ +++ YC +N+   +
Sbjct: 420 GLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRIS 479

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            ++   M   G  P+  T+ IL+   CK+  +KEA  +  +M          +YN L+KG
Sbjct: 480 TEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKG 539

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
                ++ EA ++   ++ +GL      Y   +D   + G     +EL +EAIE+
Sbjct: 540 FFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 201/423 (47%), Gaps = 24/423 (5%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + ID FD + +    ++  D N ++   V +N  + A+  + +     +  N ++F+I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL---------- 175
           +I+C+C+ +    +      +   G+ P+V TF  L++ LC   R+ EAL          
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 176 -----EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
                 + DQM  IG  P + T+N L+ GLC  GRV EA  ++  +   GL  DV TY  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           +++G CK+G +  A+ LL++  E  + P+VV ++ + +  CK+G       L   M ++ 
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             P+  +Y+ +++G   +G+   A  + ++M+      D    N+L+      S +E  L
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA----SVKEGKL 382

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
            E A ++ ++M  +    D  TY  +I    K  + D+A     H  ++   P  +TFN 
Sbjct: 383 FE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNT 437

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I   C   ++D+ + LL  +     + + T+Y+ LI    +++    A  L+   +  G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497

Query: 471 VIP 473
           V P
Sbjct: 498 VCP 500



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 195/451 (43%), Gaps = 53/451 (11%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNE-----------QET----AVKFFSEASSY 114
           +  F  + K G    V  FN LL  L + +             ET    AV  F +    
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL P   TF+ +I   C +    EA  +++ M   G H +V T+  +VN +CK G  K A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L +L +M     KP++  Y+ ++  LC  G   +A  +   +   G+ P+V+TY  ++DG
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           FC  GR ++A  LL + IER + P+V+TFN L +   KEG   +   L   M  R   PD
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400

Query: 295 KISYSTLLNGLLKWGKIRPAVSIF-------------------------------KEMVR 323
            ++Y++++ G  K  +   A  +F                               +E+ R
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   +    N+L+ G C     E D L  A  +F++M       D  T  I++    + 
Sbjct: 461 RGLVANTTTYNTLIHGFC-----EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515

Query: 384 KKTDEALIHLHHAIEMGHIP-RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
           +K +EAL  L   I+M  I   T+ +N +I  +C   K+D+A  L   +  H   P   +
Sbjct: 516 EKLEEAL-ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           Y+++I+         DA  L+      G  P
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNGHEP 605



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 193/425 (45%), Gaps = 39/425 (9%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + +FD + + G    V  FN L+  L +      A    ++    GL  +  T+  ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C   D   A  ++  M +    P+V  ++ +++ LCK G   +A  +  +M   G  
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN+ TYNC++ G C  GR  +A  +L ++    + PDV T+ A++    K G+  EA +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 248 LNEAIERGV-------------------------------TPNVVTFNTLFNGYCKEGTP 276
            +E + R +                               +P+VVTFNT+ + YC+    
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            +G+ LL+ + +R  + +  +Y+TL++G  +   +  A  +F+EM+  G   D    N L
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           L G C     E + LE+A ++FE +       D   Y I+I  + KG K DEA       
Sbjct: 509 LYGFC-----ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT---KLDQL 453
              G  P   T+N +I   CG+  I  A +L   M ++   P  ++Y+ LI    K  ++
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623

Query: 454 EKSYD 458
           +KS +
Sbjct: 624 DKSIE 628



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 164/325 (50%), Gaps = 9/325 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   FSE    G+APN +T++ MI  +C+   + +A++++  M +   +P+V TF  L++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +  K G+L EA ++ D+M      P+  TYN ++ G C   R ++A  M   + +    P
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----P 430

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV T+  ++D +C+  R +E M+LL E   RG+  N  T+NTL +G+C+         L 
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           + M      PD I+ + LL G  +  K+  A+ +F+ +     ++D    N ++ G+C  
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           S      +++A+ +F  +       D  TY ++I          +A +  H   + GH P
Sbjct: 551 S-----KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605

Query: 404 RTITFNNVIQALCGEGKIDKALLLL 428
              T+N +I+     G+IDK++ L+
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELI 630



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 140/309 (45%), Gaps = 40/309 (12%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D I+++  N  V  FN L+ A V   +   A K   E     + P++ T++ MI  +C  
Sbjct: 356 DMIERE-INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
           N F +A+     MFD    P+V TF  +++  C++ R+ E +++L ++ R G   N  TY
Sbjct: 415 NRFDDAKH----MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL------ 247
           N L+ G C V  +  A ++   + + G+ PD  T   ++ GFC+  +  EA+EL      
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530

Query: 248 ----------------------LNEAIE-------RGVTPNVVTFNTLFNGYCKEGTPMK 278
                                 ++EA +        GV P+V T+N + +G+C +     
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              L   MK     PD  +Y+TL+ G LK G+I  ++ +  EM   GF  D   +     
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEE 650

Query: 339 GLCMKSWEE 347
            +C  S EE
Sbjct: 651 IICRVSDEE 659



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 109/221 (49%), Gaps = 1/221 (0%)

Query: 43  LDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
            DL  +P  +     +D   +A  + E + +   I + G   + + +N L+     ++  
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
             A   F E  S+G+ P++ T +I++  +C      EA ++ + +  +    +   + I+
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ +CK  ++ EA ++   +   G +P++QTYN ++ G C    + +A  +   +K++G 
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           +PD  TY  ++ G  K G  ++++EL++E    G + +  T
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 79/165 (47%), Gaps = 1/165 (0%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E +++F+ I+    +     +N ++  +   ++ + A   F     +G+ P+  T+++
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI  +C K+   +A  +   M DNG+ P+ +T+  L+    K+G + +++E++ +M   G
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
              +  T     + +C V   EE  E  +  K +G    +  Y  
Sbjct: 638 FSGDAFTIKMAEEIICRVSD-EEIIENYLRPKINGETSSIPRYVV 681


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 180/356 (50%), Gaps = 5/356 (1%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN +TF+I+I   C + +  EAR +   M   G  P+V T+  L++   K G L+E  ++
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           + +M + GC  ++ TYN L+      GR+E+AY     +K  G+  +V T++  +D FCK
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G   EAM+L  +   RG+ PN  T+ +L +G CK G     + LL  M  +  +P+ ++
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+ +++GL K GK+  A ++   M R G + +E +  +L+ G  M +  E+     A  +
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSER-----ALDL 432

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
             +M  K    D   YG +I  L K +K DEA   LH     G  P T+ +  ++ AL  
Sbjct: 433 LNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFK 492

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            GK  +A+ LL  + +    P+  +Y  LI  L +     +A + +    + G+ P
Sbjct: 493 AGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDP 548



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 182/364 (50%), Gaps = 5/364 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  FN ++  L    E   A   F    + G +P+  T++ +I  Y    D  E  +++
Sbjct: 199 NVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLV 258

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M  +G   +V T+  L+N   K GR+++A     +M R G   N+ T++  +   C  
Sbjct: 259 SEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKE 318

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G V+EA ++   ++  G+ P+ +TYT+++DG CK GR ++A+ LL+E + +G+ PNVVT+
Sbjct: 319 GLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 378

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             + +G CKEG   +   +L LM++     +++ Y+TL++G         A+ +  +M  
Sbjct: 379 TVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKN 438

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E+D  +  +L+ GLC     +   +++A  +  KM       +   Y  ++  L K 
Sbjct: 439 KGMELDVSLYGTLIWGLC-----KDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKA 493

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            K  EA+  LH  ++ G  P  +T+  +I  LC  G I +A+     M E    P+  +Y
Sbjct: 494 GKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAY 553

Query: 444 DMLI 447
             LI
Sbjct: 554 TALI 557



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 182/436 (41%), Gaps = 40/436 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   +   ++K G    V  +N L+         E A  +F E    G+  N  
Sbjct: 247 KCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVV 306

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS  +  +C +    EA K+   M   G  PN  T+T LV+  CK+GRL +A+ +LD+M
Sbjct: 307 TFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 366

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRV----------------------------------- 206
              G  PN+ TY  ++ GLC  G+V                                   
Sbjct: 367 VHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNS 426

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           E A ++L  +KN G++ DV  Y  ++ G CK  + +EA  LL++    G+ PN V + T+
Sbjct: 427 ERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTI 486

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +   K G   + V LL  +      P+ ++Y  L++GL K G I  A+S F +M   G 
Sbjct: 487 MDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGL 546

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + + +   +L+ G C     +   L  A  +  +M  K    D   Y  +I    K    
Sbjct: 547 DPNVQAYTALIDGFC-----KIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANL 601

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +A       IE G       +   I   C    + +A  +L  M      P +T Y+ L
Sbjct: 602 QDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCL 661

Query: 447 ITKLDQLEKSYDACAL 462
           I K  +L    +A +L
Sbjct: 662 IRKYQKLGNMEEASSL 677



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 186/410 (45%), Gaps = 5/410 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   +F  +K  G +  V  +N L+       + E   +  SE    G A +  
Sbjct: 212 KEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVV 271

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I C+       +A      M   G   NV TF+  V++ CK G ++EA+++  QM
Sbjct: 272 TYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQM 331

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN  TY  L+ G C  GR+++A  +L  + + GL P+V TYT ++DG CK G+ 
Sbjct: 332 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 391

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  +L+     GV  N + + TL +G+       + + LL  MK +    D   Y TL
Sbjct: 392 AEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTL 451

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL K  K+  A S+  +M   G   +  +  +++  L  K+ +E + +   +++ +  
Sbjct: 452 IWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDAL-FKAGKESEAVALLHKILDSG 510

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +   V    TY  +I  L K     EA+ H +   E+G  P    +  +I   C  G +
Sbjct: 511 FQPNVV----TYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSL 566

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           +KA+ L+  M +      +  Y  LI    +     DA AL    ++ G+
Sbjct: 567 NKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGL 616



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 123/252 (48%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D+ + +K  G    VS +  L+  L    + + A     + +  GL PN+  ++ ++  
Sbjct: 430 LDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDA 489

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
                   EA  ++  + D+G+ PNV T+  L++ LCK+G + EA+   ++M  +G  PN
Sbjct: 490 LFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPN 549

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           +Q Y  L+ G C +G + +A  ++  + + G+  D   YT+++DG+ K     +A  L  
Sbjct: 550 VQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKT 609

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           + IE G+  ++  +    +G+C      +  G+L  M      PDK  Y+ L+    K G
Sbjct: 610 KMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLG 669

Query: 310 KIRPAVSIFKEM 321
            +  A S+  EM
Sbjct: 670 NMEEASSLQNEM 681



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 83/189 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA    E + +   I   G   +V  +  L+  L        A+  F++    GL PN  
Sbjct: 492 KAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQ 551

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  +C      +A  +++ M D G   +   +T L++   K   L++A  +  +M
Sbjct: 552 AYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKM 611

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + ++  Y C + G C +  ++EA  +L  +   G+ PD   Y  ++  + K+G  
Sbjct: 612 IESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNM 671

Query: 242 NEAMELLNE 250
            EA  L NE
Sbjct: 672 EEASSLQNE 680


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 200/408 (49%), Gaps = 7/408 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     ++ DG    V  +N L+  L        A K F   +  GL P+  T+  +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTL 342

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG HP+   F IL+ +  K  ++ EA+ V  +M + G 
Sbjct: 343 LQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN+ TY  ++  LC  G V++A      + ++GL P++  YT+++   C   + ++A E
Sbjct: 403 NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEE 462

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E ++RG+  N + FN++ + +CKEG  ++   L  LM +    P+ I+YSTL++G  
Sbjct: 463 LILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYC 522

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A  +   M   G + D    N+L+ G C  S      ++DA  +F++M     
Sbjct: 523 LAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR-----MDDALALFKEMVSSGV 577

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             +  TY I+++ L   ++T  A        + G      T+N ++  LC     D+AL 
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637

Query: 427 LLF-LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +   L     ++ +RT ++++I  L ++ ++ +A  L+ A    G++P
Sbjct: 638 MFQNLCLTDLQLETRT-FNIMIGALLKVGRNDEAKDLFVAFSSNGLVP 684



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 197/442 (44%), Gaps = 48/442 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N  L A V  +    AV  ++  +  G   + P   T+ I+I 
Sbjct: 37  VFDELLRRGRGASIYGLNRAL-ADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIG 95

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
           C C           +  +   G+     TFT L+  LC   R  +A++ VL +M  + C 
Sbjct: 96  CCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCM 155

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---GLKPDVYTYTAVMDGFCKVGRS--- 241
           P++ +   LLKGLC   R +EA E+L  + +D   G  PDV +YT V++GF K G S   
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215

Query: 242 --------------------------------NEAMELLNEAIERGVTPNVVTFNTLFNG 269
                                           ++AME+L   ++ GV PN +T+N++ +G
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YC    P + +G LK M+     PD ++Y++L++ L K G+   A  IF  M + G E D
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                +LL+G     +  K  L + + + + M +     D   + I+I    K +K DEA
Sbjct: 336 IATYCTLLQG-----YATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           ++      + G  P  +T+  VI  LC  G +D A+L    M +    P+   Y  LI  
Sbjct: 391 MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450

Query: 450 LDQLEKSYDACALYGAALKQGV 471
           L   +K   A  L    L +G+
Sbjct: 451 LCIFDKWDKAEELILEMLDRGI 472



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 187/394 (47%), Gaps = 40/394 (10%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G AP+  +++ +I  +  + D  +A      M D    P+V T++ ++ +LCK   + +A
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           +EVL  M + G  PN  TYN +L G C   + +EA   L  +++DG++PDV TY ++MD 
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK GRS EA ++ +   +RG+ P++ T+ TL  GY  +G  ++   LL LM +    PD
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPD 370

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
              ++ L+    K  K+  A+ +F +M + G   +     +++  LC KS      ++DA
Sbjct: 371 HHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC-KSGS----VDDA 425

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA---------------------LIHL 393
              FE+M  +    +   Y  +I +L    K D+A                     +IH 
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485

Query: 394 H--------------HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           H                + +G  P  IT++ +I   C  GK+D+A  LL  M+     P 
Sbjct: 486 HCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPD 545

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y+ LI    ++ +  DA AL+   +  GV P
Sbjct: 546 CVTYNTLINGYCRVSRMDDALALFKEMVSSGVSP 579



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 182/371 (49%), Gaps = 5/371 (1%)

Query: 65  PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
            L E   + D + ++G +     FN L+ A     + + A+  FS+   +GL PN  T+ 
Sbjct: 351 ALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYG 410

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +I   C      +A    + M D G  PN+  +T L++SLC   +  +A E++ +M   
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR 470

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G   N   +N ++   C  GRV E+ ++   +   G+KP+V TY+ ++DG+C  G+ +EA
Sbjct: 471 GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEA 530

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            +LL+     G+ P+ VT+NTL NGYC+       + L K M      P+ I+Y+ +L G
Sbjct: 531 TKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 590

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L    +   A  ++  + + G +++    N +L GLC     + +L ++A ++F+ +   
Sbjct: 591 LFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLC-----KNNLTDEALRMFQNLCLT 645

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               +  T+ I+I  L K  + DEA          G +P   T+  + + + G+G +++ 
Sbjct: 646 DLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 705

Query: 425 LLLLFLMYEHA 435
             L F M ++ 
Sbjct: 706 DQLFFSMEDNG 716



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 170/414 (41%), Gaps = 85/414 (20%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV--LDQMGRIGC---KPNIQT 192
           +AR V D +   G   ++     L  +L    R   A  V   ++M R G     P + T
Sbjct: 33  DARHVFDELLRRGRGASIYG---LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHT 89

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL---- 248
           Y  L+   C  GR++  +  L NV   G + +  T+T ++ G C   R+++AM+++    
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 249 -------------------------NEAIE----------RGVTPNVVTFNTLFNGYCKE 273
                                     EA+E           G  P+VV++ T+ NG+ KE
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKE 209

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   K       M  R   PD ++YS+++  L K   +  A+ +   MV+ G   +    
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269

Query: 334 NSLLRGLC--------------MKS-WEEKDLL---------------EDAYQVFEKMTK 363
           NS+L G C              M+S   E D++                +A ++F+ MTK
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEG 419
           +    D  TY     TL +G  T  AL+ +H  +++    G  P    FN +I A   + 
Sbjct: 330 RGLEPDIATYC----TLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE 385

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           K+D+A+L+   M +H   P+  +Y  +I  L +     DA   +   + +G+ P
Sbjct: 386 KVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 4/141 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +++  I K GT   +S +N +L  L   N  + A++ F       L   + TF+IMI   
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 661

Query: 131 --CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
               +ND  EA+ +      NG  PN  T+ ++  ++   G L+E  ++   M   GC  
Sbjct: 662 LKVGRND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTV 719

Query: 189 NIQTYNCLLKGLCYVGRVEEA 209
           +    N +++ L   G +  A
Sbjct: 720 DSGMLNFIVRELLQRGEITRA 740


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 154/283 (54%), Gaps = 5/283 (1%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F E  S GL P+  T++ +I  YC   +   A  + + M   G  PN+ T+  L++ LC
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K G L  A E+LD+M + G + N+  YN ++ G+C  G +E+A +++  ++  G+ PD  
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYT V+D +C++G  ++A +LL E ++RG+ P VVTFN L NG+C  G    G  LL  M
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            ++  +PD I+Y+TL+        +     I+K M   G   D    N L++G C     
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC----- 654

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
           +   L++A+ ++++M +K  V    +Y  +I+   K +K  EA
Sbjct: 655 KARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEA 697



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 211/415 (50%), Gaps = 11/415 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ-ETAVKFFSEASSYGLAPN 119
           ++   L E   + D +   G   +V   N  L  +   +E  E A+K F E   YG++ N
Sbjct: 201 VEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCE---YGISWN 257

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           + +++I+I   C      EA +++  M      P+V +++ +++  C  G LK+AL+++D
Sbjct: 258 TTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMD 317

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M   G KPN  TYN ++  LC +G+  EA ++L  + +  + PD   YT ++ GF K+G
Sbjct: 318 DMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLG 377

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
               A +  +E + + ++P+ +T+ TL  G+ + G  ++   L   M  R   PD+++Y+
Sbjct: 378 HVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYT 437

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL++   K G++  A S+  EMV+ G   +     +L+ GLC K  E    L+ A ++ +
Sbjct: 438 TLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC-KHGE----LDTANELLD 492

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGE 418
           +M KK    +   Y  ++  + K    ++A I L   +E+  I P  IT+  VI A C  
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQA-IKLMKEMEVAGIDPDAITYTTVIDAYCRL 551

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G IDKA  LL  M +    P+  ++++L+     L    D   L G  L++G++P
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVP 606



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 190/396 (47%), Gaps = 9/396 (2%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G +W+ + +N ++ +L  L + + A +   +       P+  ++S +I  YC+  +  +A
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            K++D M   G  PN  T+  ++  LCK G+  EA +VL +M      P+   Y  L+ G
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
              +G V  A +    + +  + PD  TYT ++ GF + G+  E   L +E I RG+ P+
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VT+ TL + YCK G  +    L   M +    P+ ++Y  L++GL K G++  A  +  
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVI 377
           EM + G +++  + NS++ G+C     +   +E A ++ ++M  +V+  DP   TY  VI
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGIC-----KAGNIEQAIKLMKEM--EVAGIDPDAITYTTVI 545

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               +    D+A   L   ++ G  P  +TFN ++   C  G ++    LL  M E   +
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P   +Y+ L+ +            +Y     QGV P
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAP 641



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 188/407 (46%), Gaps = 5/407 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK+ + + D ++  G   +   +N +++ L  + +   A K   E  S  + P++  ++ 
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTT 368

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +        A K  D M      P+  T+T L+    + G++ E   +  +M   G
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KP+  TY  L+   C  G +  A+ +   +   G+ P++ TY A++DG CK G  + A 
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL+E  ++G+  NV  +N++ NG CK G   + + L+K M+     PD I+Y+T+++  
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G I  A  + +EM+  G +      N L+ G CM       +LED  ++   M +K 
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLG-----MLEDGDRLLGWMLEKG 603

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            V D  TY  +++        +            G  P + T+N +I+  C    + +A 
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            L   M E   +P+ TSY+ LI +  +  K  +A  L+      G++
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLV 710



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 144/313 (46%), Gaps = 42/313 (13%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQ----------------MGRI---------- 184
           + PN   F I    L + G L EA ++LD+                + RI          
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMA 245

Query: 185 -------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
                  G   N  +YN ++  LC +G+V+EA+ +LM +      PDV +Y+ V+DG+C 
Sbjct: 246 IKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH 305

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           +G   +A++L+++   +G+ PN  T+N++    CK G   +   +L+ M  +  +PD + 
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLEDAY 355
           Y+TL++G  K G +R A   F EM+      D     +L++G     K  E ++L     
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL----- 420

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
             F +M  +    D  TY  +I    K  +   A    +  ++MG  P  +T+  +I  L
Sbjct: 421 --FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 416 CGEGKIDKALLLL 428
           C  G++D A  LL
Sbjct: 479 CKHGELDTANELL 491



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 119/252 (47%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++ D ++K G   +V  +N ++  +      E A+K   E    G+ P++ T++ +I  Y
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   D  +A K++  M D G  P V TF +L+N  C  G L++   +L  M   G  P+ 
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L+K  C    +    ++   ++N G+ PD  TY  ++ G CK     EA  L  E
Sbjct: 609 ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKE 668

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            IE+G  P V ++N L   + K+    +   L + M+    + D   Y+  ++   + G 
Sbjct: 669 MIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGD 728

Query: 311 IRPAVSIFKEMV 322
           +   +++  E +
Sbjct: 729 VEITLNLCDEAI 740



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 130/286 (45%), Gaps = 39/286 (13%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           E   A    +E    G+ PN  T+  +I   C   +   A +++D M   G   NV  + 
Sbjct: 448 EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYN 507

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            +VN +CK+G +++A++++ +M   G  P+  TY  ++   C +G +++A+++L  + + 
Sbjct: 508 SMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDR 567

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL------------- 266
           GL+P V T+  +M+GFC +G   +   LL   +E+G+ P+ +T+NTL             
Sbjct: 568 GLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTT 627

Query: 267 ----------------------FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
                                   G+CK     +   L K M ++  +P   SY+ L+  
Sbjct: 628 TKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKR 687

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             K  K   A  +F+EM   G   D  + N  +  +C   +EE D+
Sbjct: 688 FYKKRKFXEARELFEEMRGHGLVADGEIYNFFV-DMC---YEEGDV 729


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 195/406 (48%), Gaps = 5/406 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  + F ++K+ G   ++   N LL   + LN  E A   ++E     +  + +TF+IMI
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    +A+  +  M  +G  PN+ T+  +V+  C SGR++ A  +L  M R   +
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TY  L+ G+C  GR+EEA ++   +   GL+P    Y  ++DGFC  G  + A   
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E +++G++P + T+N+L +    E    +   ++K ++++   PD I+Y+ L+NG  +
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
               + A  +  EM+  G +  ++   SLL  L      +K+ +++A  +F+K+T +  +
Sbjct: 409 CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVL-----SKKNRMKEADDLFKKITSEGVL 463

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D   +  +I           A   L     M   P  +TFN ++Q  C EGK+++A  L
Sbjct: 464 PDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAREL 523

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              M      P   S++ LI+   +     DA  +    L  G  P
Sbjct: 524 FDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 174/386 (45%), Gaps = 5/386 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   LK+  D    ++  G   ++  +N ++         E A    +      + P+S+
Sbjct: 233 KEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSF 292

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I   C +    EA K+ + M   G  P+   +  L++  C  G L  A    D+M
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P + TYN L+  L    R +EA  M+  ++  G+ PD  TY  +++G+C+   +
Sbjct: 353 LKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANA 412

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  L +E +  G+ P   T+ +L +   K+    +   L K +     LPD I ++ L
Sbjct: 413 KKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNAL 472

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G      ++ A  + K+M R     DE   N++++G C +       +E+A ++F++M
Sbjct: 473 IDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK-----VEEARELFDEM 527

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            ++    D  ++  +I    +     +A    +  ++ G  P  +T+N ++Q LC   + 
Sbjct: 528 KRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEG 587

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI 447
           D A  LL  M      P  T+Y  LI
Sbjct: 588 DLAEELLKEMVSKGMTPDDTTYFTLI 613



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 159/327 (48%), Gaps = 5/327 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   IF+ + + G   S   +N L+         + A  +  E    G++P   
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMS 362

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I     +    EA  +I  + + G  P+  T+ IL+N  C+    K+A  + D+M
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP  +TY  LL  L    R++EA ++   + ++G+ PD   + A++DG C     
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNV 482

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A ELL +     V P+ VTFNT+  G+C+EG   +   L   MK+R   PD IS++TL
Sbjct: 483 KGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  + G I+ A  +  EM+  GF       N+L++GLC    +E DL E   ++ ++M
Sbjct: 543 ISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN--QEGDLAE---ELLKEM 597

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDE 388
             K    D  TY  +I  + K    DE
Sbjct: 598 VSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 139/294 (47%), Gaps = 6/294 (2%)

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           R+G K +I  ++ L+K  C + R +EA+E    +K  G+ P + T  +++  F K+ R+ 
Sbjct: 145 RLGFKSSI-VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTE 203

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
            A  L  E     +  +V TFN + N  CKEG   K    +  M+     P+ ++Y+T++
Sbjct: 204 AAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIV 263

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +G    G++  A +I   M R   E D     SL+ G+C     ++  LE+A ++FE+M 
Sbjct: 264 HGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMC-----KQGRLEEASKIFEEMV 318

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +K        Y  +I         D A  +    ++ G  P   T+N++I AL  E + D
Sbjct: 319 QKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD 378

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           +A  ++  + E    P   +Y++LI    +   +  A  L+   L  G+ P +K
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 168/355 (47%), Gaps = 11/355 (3%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E +  F+ +    T  ++S FN+L  AL    +    +      +S GL  N  + +I
Sbjct: 88  LHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNI 147

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++ C C+    FE   V   +   GY PN  TFT LV  LC  G++ EA+ V   MG   
Sbjct: 148 LLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFD 207

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEA---YEMLMNVKND---GLKPDVYTYTAVMDGFCKVG 239
           C+P+  T   L+ GLC  G    A   +E ++N  +D     KP V +Y+ ++D  CK G
Sbjct: 208 CRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDG 267

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
               A E   E  E+G+ PNVVT+ +L +G C      +   L   M     LPD +++S
Sbjct: 268 LVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFS 327

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L+  L K GK++ A  +F  MV+   E   R  N L+ G C+       ++++  ++F 
Sbjct: 328 VLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAG-----MVDEGKKIFL 382

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            M  K    D G+Y I+++   K  +   A+I     ++ G  P  IT++ V  A
Sbjct: 383 SMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDA 437



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 188/364 (51%), Gaps = 23/364 (6%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A +FF E    G+ PN  T++ ++   C+ +++ EA+++   M D+G  P+V TF++L
Sbjct: 270 ERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVL 329

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + +LCK G++KEA  + D M +   +P+ +TYN L++G C  G V+E  ++ +++ N   
Sbjct: 330 IGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRC 389

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           + D  +Y+ +M  +CK    + AM L  E ++RG+ P V+T       Y K G   K  G
Sbjct: 390 QHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVIT-------YSKVGDARKLFG 442

Query: 282 LLKLMKKRNCLPDKISYS---TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            ++    ++ + D ISYS     L+GL K G +  A+ +F  +    F  +  + NSL+ 
Sbjct: 443 EIQF---QDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLIN 499

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           G+C       + LE A+++F ++  +    D  TY I+I  L K  +  +A        E
Sbjct: 500 GMC-----RSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEE 554

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL--EKS 456
            G  P  +TFN +++ LC   +  K + LL  M      P  ++   L+  +D L  +++
Sbjct: 555 KGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDAST---LLIVMDILLKDEN 611

Query: 457 YDAC 460
           Y  C
Sbjct: 612 YHEC 615



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 155/371 (41%), Gaps = 34/371 (9%)

Query: 49  PRSLQAQRFVDRIKASPLKERI-DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D +    L ER  + F  +K+ G   +V  +  LL  L   +E E A + 
Sbjct: 251 PTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRL 310

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F E   +GL P+  TFS++I   C      EA  + D M      P+  T+ IL+   C 
Sbjct: 311 FIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCL 370

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G + E  ++   M    C+ +  +Y+ L+K  C    V  A  +   + + G++P V T
Sbjct: 371 AGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVIT 430

Query: 228 YTAV----------------------------MDGFCKVGRSNEAMELLNEAIERGVTPN 259
           Y+ V                            +DG CK G  +EA+++           N
Sbjct: 431 YSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASN 490

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           V  FN+L NG C+         L   +      PD ++Y+ ++ GL K G+ + A  +F 
Sbjct: 491 VAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFL 550

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM   G   +    N+L+RGLC+ S   K +     ++  KM  +    D  T  IV+  
Sbjct: 551 EMEEKGCAPNVVTFNTLMRGLCLNSERPKIV-----ELLHKMAARKLSPDASTLLIVMDI 605

Query: 380 LGKGKKTDEAL 390
           L K +   E L
Sbjct: 606 LLKDENYHECL 616



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 15/352 (4%)

Query: 131 CNKNDF--FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
           C   DF   EA    + M      P ++ F  L  +L K  +    + +  +M  IG   
Sbjct: 81  CKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLK 140

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N  + N LL  LC V RV E + +   +   G +P+  T+T ++ G C  G+  EA+ + 
Sbjct: 141 NFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVF 200

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR------NCLPDKISYSTLL 302
                    P+ +T   L +G C+ G     + L + M         NC P  +SYS ++
Sbjct: 201 KIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCII 260

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKM 361
           + L K G +  A   F EM   G   +     SLL GLC  S WEE      A ++F +M
Sbjct: 261 DSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEE------AKRLFIEM 314

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                + D  T+ ++I  L K  K  EA       ++    P T T+N +I+  C  G +
Sbjct: 315 VDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMV 374

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           D+   +   M          SY +L+    +  + + A  LY   + +G+ P
Sbjct: 375 DEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQP 426



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/319 (22%), Positives = 129/319 (40%), Gaps = 48/319 (15%)

Query: 166 CKSG--RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           CKSG   L EAL   +QM  +   P +  +N L   L    +      M   + + GL  
Sbjct: 81  CKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLK 140

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +  +   +++  C V R  E   +    + +G  PN  TF  L  G C EG   + V + 
Sbjct: 141 NFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVF 200

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR----FGFEVDERMMN--SLL 337
           K+M   +C P  I+   L++GL + G    A+ + + M+     FG      +++   ++
Sbjct: 201 KIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCII 260

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
             LC     +  L+E A + F +M +K                                 
Sbjct: 261 DSLC-----KDGLVERAKEFFVEMKEK--------------------------------- 282

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             G  P  +T+ +++  LC   + ++A  L   M +H  +P   ++ +LI  L ++ K  
Sbjct: 283 --GIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVK 340

Query: 458 DACALYGAALKQGVIPQRK 476
           +A  L+   +++ V P  +
Sbjct: 341 EASGLFDLMVQRYVEPSTR 359


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 179/349 (51%), Gaps = 13/349 (3%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN  T++ +I  +C      +AR  +  M + G  P+  T+  L+  LC++G L  A
Sbjct: 85  GAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAA 144

Query: 175 LEVLDQMG-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
             +  QM  R G   +  +Y  L+KGLC  GR+++A  +   +     +P V+TYT ++D
Sbjct: 145 CGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLD 204

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G CKV R  EA  LL E + +GV PNVVT+N L  G C+EG       LL+ M+ +   P
Sbjct: 205 GLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSP 264

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D  +Y+ +++GL K GK+     +  E +  G  ++    N+L+ G C K  + K  L D
Sbjct: 265 DCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYC-KGGDMKAAL-D 322

Query: 354 AYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
             Q+ ++     +  +PG  T+  VI     G K  +A+  L      G  P T+TFN++
Sbjct: 323 VLQLMKR-----NRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSL 377

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKSY 457
           I   C  G+   AL LL LM E+  +P R +Y + I  L    QLE+++
Sbjct: 378 ISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAH 426



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 191/388 (49%), Gaps = 8/388 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           +N L++ L        A   F +    +G   + ++++I+I+  C      +A +V   M
Sbjct: 128 YNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKM 187

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
                 P V T+T+L++ LCK  R+ EA  +L +M   G  PN+ TYN L+ GLC  GR 
Sbjct: 188 SRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRF 247

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           ++  ++L  ++     PD +TYT V+ G CK G+     ++L+EAI +GV   V+T+N L
Sbjct: 248 DDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNAL 307

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            NGYCK G     + +L+LMK+    P   +++ +++G    GK+  A++   +M   G 
Sbjct: 308 INGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGL 367

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             +    NSL+ G C  S  E+ +   A ++ + M +   + D  TY I I  L    + 
Sbjct: 368 SPNTVTFNSLISGQC--SVGERKI---ALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQL 422

Query: 387 DEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           +EA   L   + M  I    + + +++   C  G ID A  L+  M     +P   +Y+ 
Sbjct: 423 EEAH-SLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNT 481

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           LI  L ++++   A  L     KQG+ P
Sbjct: 482 LIDGLCKVKRLDRAIDLLDKMKKQGIEP 509



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 187/392 (47%), Gaps = 9/392 (2%)

Query: 61  IKASPLKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           IK      RID    +F  + +      V  +  LL  L  +     A     E  + G+
Sbjct: 168 IKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGV 227

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            PN  T++ +I   C +  F +  K+++ M    + P+  T+T +V+ LCK G++    +
Sbjct: 228 VPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAK 287

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           VL +    G    + TYN L+ G C  G ++ A ++L  +K + + P V T+  V+ GFC
Sbjct: 288 VLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFC 347

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
             G+ ++AM  L +    G++PN VTFN+L +G C  G     + LL LM++   LPD+ 
Sbjct: 348 CGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQ 407

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y+  ++ L   G++  A S+F  +   G +    +  SL+ G C     +   ++ A+ 
Sbjct: 408 TYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYC-----QVGDIDSAFG 462

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           + EKM  +  + D  TY  +I  L K K+ D A+  L    + G  P T TFN +I+ + 
Sbjct: 463 LMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQML 522

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
            + K   A  +   M      P + +Y + I+
Sbjct: 523 WDKKHADAAKMYEQMISSGCKPDKQTYTLKIS 554



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 195/434 (44%), Gaps = 27/434 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K  +D+   +K++  N  V  FN+++       +   A+ F ++ +  GL+PN+ 
Sbjct: 313 KGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTV 372

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C+  +   A +++D M + G  P+  T+ I +++LC  G+L+EA  +   +
Sbjct: 373 TFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCL 432

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G K +   Y  L+ G C VG ++ A+ ++  + ++   PDV+TY  ++DG CKV R 
Sbjct: 433 PMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRL 492

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A++LL++  ++G+ P   TFN L      +        + + M    C PDK +Y+  
Sbjct: 493 DRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLK 552

Query: 302 LN-----GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           ++     G  K   I  AV    EM   G   D    N+++     K++ +  L E A+ 
Sbjct: 553 ISTDWFEGATKEENIDMAVV---EMHEAGVFPDVETYNAII-----KAYVDAGLKEKAFF 604

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD----EALIHL----------HHAIEMGHI 402
              KM       D  TY I++  +     +D    E +  +              E    
Sbjct: 605 AHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAA 664

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P   T+  +++ LC + ++++   LL  M  ++ +      D L+     LE   +AC  
Sbjct: 665 PGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQ 724

Query: 463 YGAALKQGVIPQRK 476
           + +   Q   P  K
Sbjct: 725 FRSMAHQSFQPGLK 738



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 132/308 (42%), Gaps = 6/308 (1%)

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           ++ RL   L     M + G  PN  TYN L+   C +  + +A   L+ ++  GL PD +
Sbjct: 67  RAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTF 126

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           TY  +M G C+ G    A  L  +   R G   +  ++  L  G C  G       +   
Sbjct: 127 TYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAK 186

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M +  C P   +Y+ LL+GL K  ++  A ++  EMV  G   +    N+L+ GLC    
Sbjct: 187 MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLC---- 242

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            ++   +D  ++ EKM  +    D  TY  V+  L K  K       LH AI  G     
Sbjct: 243 -QEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEV 301

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           +T+N +I   C  G +  AL +L LM  +   P   +++ +I       K + A A    
Sbjct: 302 LTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQ 361

Query: 466 ALKQGVIP 473
               G+ P
Sbjct: 362 MAGAGLSP 369



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/377 (21%), Positives = 131/377 (34%), Gaps = 101/377 (26%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   ID+ D +KK G   +   FN L+  ++   +   A K + +  S G  P+  
Sbjct: 488 KVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQ 547

Query: 122 TFSIMIRCYCNKNDFFEA--------------------------RKVIDCMFDNGYH--- 152
           T+++ I       D+FE                             +I    D G     
Sbjct: 548 TYTLKI-----STDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKA 602

Query: 153 -------------PNVTTFTILVNSLC--------------KSGRLKEALEVLDQMGRIG 185
                        P+ TT++IL+N +C              K   ++   E+ +QM    
Sbjct: 603 FFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESD 662

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P I TY  LL+GLC   R+EE   +L+ ++ + +  D      ++  +C +    EA 
Sbjct: 663 AAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREAC 722

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E       +   P +                           K  CL        LL+GL
Sbjct: 723 EQFRSMAHQSFQPGL---------------------------KSCCL--------LLSGL 747

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G    AVSIF +M+  G+  DE +   L+  L      EK       ++   M  K 
Sbjct: 748 CDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCL-----HEKGHAGACLEMLSVMDAKK 802

Query: 366 SVTDPGTYGIVIRTLGK 382
            V    TY  ++R + +
Sbjct: 803 CVASTRTYASLVRLVAE 819


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 182/371 (49%), Gaps = 20/371 (5%)

Query: 88  FNDLLMALVMLNEQETAVKFFS-EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           FN +L AL  + +     + ++       + P+  T+ I++   C      +A +V+D M
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198

Query: 147 F--DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ-MGRI-GCKPNIQTYNCLLKGLCY 202
              D    P+V T   +V+ LCKSGR++EAL  ++Q M  + GC PN  TYNCL+   C 
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP---- 258
           VG +  AYE++  ++N+G+  ++ T   ++ G C+ GR+  A+E   E  +R V P    
Sbjct: 259 VGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGKG 316

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           N VT++TL             + L          PD I Y T+++GL + G++  A S+ 
Sbjct: 317 NAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMA 376

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
             M   GF++D +  N L+ G C      K  L +AY++ ++M +     D  TY  ++ 
Sbjct: 377 SSMKEAGFKLDTKAYNILIAGFC-----RKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 379 TLGKGKKTDEALIH--LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
             G  K  D A +   L   I+ G  P  ITF  ++   C  GKID+AL +L  M E   
Sbjct: 432 --GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGI 489

Query: 437 IPSRTSYDMLI 447
            P+   Y+ LI
Sbjct: 490 HPNNVIYNTLI 500



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 166/321 (51%), Gaps = 11/321 (3%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP----NSWTFSIM 126
           ++ + ++ +G   ++   N ++  L        A++FF E  +  + P    N+ T+S +
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT--VWPEGKGNAVTYSTL 324

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +    + N+   A ++       G+ P+   +  +++ L ++GRL++A  +   M   G 
Sbjct: 325 VGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGF 384

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           K + + YN L+ G C   R+ EAYE+L  +K  G++PDV TY  ++ G CK G      E
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDE 444

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           LL + I+ G  P+V+TF TL +GYCK G   + + +L+ M +    P+ + Y+TL++ L 
Sbjct: 445 LLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLC 504

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G +  A+ +F EM       +    N+LL+GL      +K++ E A+++ ++M ++  
Sbjct: 505 KRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL-----RDKNMPEKAFELMDQMREERC 559

Query: 367 VTDPGTYGIVIRTLGKGKKTD 387
             D  T  +++  L    +TD
Sbjct: 560 FPDYVTVDVLMEWLPVIGETD 580



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 158/330 (47%), Gaps = 15/330 (4%)

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGR--IGCKPNIQTYNCLLKGLCYVGRVEEA 209
            P+V T+ ILVN LCK+GR+ +AL VLD M R  +  +P++ T N ++ GLC  GRV+EA
Sbjct: 169 RPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA 228

Query: 210 YEMLMNVKND--GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
              +    +   G  P+  TY  ++D FC+VG  + A EL+ +    GV  N+VT NT+ 
Sbjct: 229 LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIV 288

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPD----KISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
            G C+ G    G  L    +KR   P+     ++YSTL+  LL    +  A+ +F E + 
Sbjct: 289 GGLCRAGR--TGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMS 346

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D  M  +++ GL      +   LEDA  +   M +     D   Y I+I    + 
Sbjct: 347 EGHSPDAIMYFTMISGL-----TQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK 401

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           K+  EA   L    E+G  P   T+N ++   C  G       LL  M +    PS  ++
Sbjct: 402 KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF 461

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L+    ++ K  +A  +  +  + G+ P
Sbjct: 462 GTLVHGYCKVGKIDEALRILRSMDESGIHP 491



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 119/241 (49%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++F     +G +     +  ++  L      E A    S     G   ++  ++I+I  
Sbjct: 338 MELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAG 397

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C K    EA +++  M + G  P+V T+  L++  CK+G      E+L +M   GC+P+
Sbjct: 398 FCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPS 457

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + T+  L+ G C VG+++EA  +L ++   G+ P+   Y  ++D  CK G  + A+EL +
Sbjct: 458 VITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFD 517

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E  E+ V  NV TFN L  G   +  P K   L+  M++  C PD ++   L+  L   G
Sbjct: 518 EMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIG 577

Query: 310 K 310
           +
Sbjct: 578 E 578



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 96/206 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L++   +  S+K+ G       +N L+           A +   E    G+ P+  
Sbjct: 365 QAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVC 424

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C   DF    +++  M D+G  P+V TF  LV+  CK G++ EAL +L  M
Sbjct: 425 TYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSM 484

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN   YN L+  LC  G V+ A E+   +K   +  +V T+ A++ G       
Sbjct: 485 DESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMP 544

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLF 267
            +A EL+++  E    P+ VT + L 
Sbjct: 545 EKAFELMDQMREERCFPDYVTVDVLM 570



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 1/200 (0%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++   +K+ G    V  +N LL       +     +   +    G  P+  TF  
Sbjct: 404 LHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGT 463

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  YC      EA +++  M ++G HPN   +  L++ LCK G +  A+E+ D+M    
Sbjct: 464 LVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKS 523

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              N+ T+N LLKGL      E+A+E++  ++ +   PD  T   +M+    +G ++   
Sbjct: 524 VPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLK 583

Query: 246 ELLNEAIERGVTPNVVTFNT 265
             + +  E   +  +V+  T
Sbjct: 584 RFMQQG-EHTASKRIVSDRT 602


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 201/454 (44%), Gaps = 65/454 (14%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++    + + +K  G    V  +N L+  L    E + A          G+ PN  
Sbjct: 186 KVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVV 245

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+++ I  YC +N   +A  + + M   G  P+V T + LV  LCK GR  EA  +  +M
Sbjct: 246 TYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREM 305

Query: 182 GRIGCKPNIQTY-----------------------------------NCLLKGLCYVGRV 206
            +IG  PN  TY                                     L+  LC  G++
Sbjct: 306 EKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKI 365

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA +M  +  +D   P+  TYT ++D  CK G  + A ++L+E  E+ ++PNVVTF+++
Sbjct: 366 DEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSI 425

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            NG  K G   K    ++ MK+R   P+ ++Y T+++G  K      A+ ++ EM+  G 
Sbjct: 426 INGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGV 485

Query: 327 EVDERMMNSLLRGL-----------CMKSWEEKDLLED-------------------AYQ 356
           EV++ +++SL+ GL             +   E+ +L D                   A++
Sbjct: 486 EVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFK 545

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           V +++T+K  + D   Y + I  L    K+ EA   L      G  P  +T+N +I A  
Sbjct: 546 VGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQS 605

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            EGK  KAL LL  M   +  P+  +Y  LI  L
Sbjct: 606 REGKTAKALKLLNGMKRSSIKPNLITYSTLIVGL 639



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 165/366 (45%), Gaps = 5/366 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+     + + ETA        + G+  +   ++ ++   C   +   AR ++D
Sbjct: 174 VVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVD 233

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M  +G  PNV T+T+ +   C+   + +A  + ++M R G  P++ T + L+ GLC  G
Sbjct: 234 TMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDG 293

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R  EAY +   ++  G  P+  TY  ++D   K  R NE++ LL E + RGV  +++ + 
Sbjct: 294 RFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYT 353

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +  CKEG   +   + +     N  P+ ++Y+ L++ L K G +  A  +  EM   
Sbjct: 354 ALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEK 413

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
               +    +S++ GL  + W  K     A     +M ++    +  TYG VI    K  
Sbjct: 414 SISPNVVTFSSIINGLVKRGWVGK-----ATDYMREMKERGIDPNVVTYGTVIDGSFKCL 468

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             + AL   H  +  G        ++++  L   GKI+KA  L   M E   +    +Y 
Sbjct: 469 GQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYT 528

Query: 445 MLITKL 450
            LI  L
Sbjct: 529 TLIDGL 534



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 173/382 (45%), Gaps = 5/382 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  + + G      ++  L+  L        A K   E +   L P++  +++ I C C
Sbjct: 511 LFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLC 570

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA   ++ M   G  P+  T+  ++ +  + G+  +AL++L+ M R   KPN+ 
Sbjct: 571 MLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLI 630

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY+ L+ GL   G VE+A  +L  + + G  P   T+  V+    +  RS+  +E+    
Sbjct: 631 TYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWM 690

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  G+  ++  +NTL    C  G   K + +L+ M  R   PD I+++ L+ G  K G +
Sbjct: 691 MNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHL 750

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A S + +M+  G   +    N+LL GL     E    + ++  V  +M K+       
Sbjct: 751 DNAFSTYDQMLYHGISPNVATFNTLLGGL-----ESAGRIGESDMVLNEMKKRGIEPSNL 805

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY I++   GK     EA+      +  G +P+  T+N +I      G + +A  L   M
Sbjct: 806 TYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEM 865

Query: 432 YEHAKIPSRTSYDMLITKLDQL 453
                +P+  +YD+L++   +L
Sbjct: 866 QNRGVLPTSCTYDILVSGWSKL 887



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 161/343 (46%), Gaps = 7/343 (2%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY--HPNVTTFTILVNS 164
             +E    G+  ++ T + ++   C       A  + + M   G     +V  +  LV+ 
Sbjct: 124 LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDG 183

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
            CK G ++ A  V ++M   G   ++  YN L+ GLC  G V+ A +M+  +K DG++P+
Sbjct: 184 YCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPN 243

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V TYT  +  +C+    ++A  L  E + +GV P+VVT + L  G CK+G   +   L +
Sbjct: 244 VVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFR 303

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            M+K    P+ ++Y  L++ L K  +   ++S+  E+V  G  +D  M  +L+  LC   
Sbjct: 304 EMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLC--- 360

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
             ++  +++A  +F          +  TY ++I  L K    D A   L    E    P 
Sbjct: 361 --KEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPN 418

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            +TF+++I  L   G + KA   +  M E    P+  +Y  +I
Sbjct: 419 VVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVI 461



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/518 (23%), Positives = 198/518 (38%), Gaps = 110/518 (21%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA    E + +   +   G    +  +  L+  L    + + A   F  A S    PN  
Sbjct: 326 KAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGV 385

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I   C   +   A +V+  M +    PNV TF+ ++N L K G + +A + + +M
Sbjct: 386 TYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREM 445

Query: 182 GRIGCKPNIQTY-----------------------------------NCLLKGLCYVGRV 206
              G  PN+ TY                                   + L+ GL   G++
Sbjct: 446 KERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKI 505

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDG-------------------------------- 234
           E+A  +   +   G+  D   YT ++DG                                
Sbjct: 506 EKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVF 565

Query: 235 ---FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
               C +G+S EA   L E    G+ P+ VT+NT+     +EG   K + LL  MK+ + 
Sbjct: 566 INCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSI 625

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF------------------------E 327
            P+ I+YSTL+ GL + G +  A  +  EM   GF                        E
Sbjct: 626 KPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILE 685

Query: 328 VDERMM-----------NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           + E MM           N+L+R LC      K     A  V E+M+ +    D  T+  +
Sbjct: 686 IHEWMMNAGLCADITVYNTLVRVLCYNGMTRK-----AMVVLEEMSGRGIAPDTITFNAL 740

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I    K    D A       +  G  P   TFN ++  L   G+I ++ ++L  M +   
Sbjct: 741 ILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGI 800

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            PS  +YD+L+T   +     +A  LY   + +G +P+
Sbjct: 801 EPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPK 838



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 145/299 (48%), Gaps = 10/299 (3%)

Query: 155 VTTFTILVNSLCKSGRLKEA---LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
           VT  T+LV  LC+ GR+  A    EV+ + G IG   ++  +N L+ G C VG +E A+ 
Sbjct: 138 VTVNTVLVG-LCRDGRVDRAAALAEVMVRGGGIG-GLDVVGWNSLVDGYCKVGDMETAFA 195

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +   +K  G+  DV  Y +++ G C+ G  + A ++++     GV PNVVT+      YC
Sbjct: 196 VAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYC 255

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           +         L + M ++  LPD ++ S L+ GL K G+   A ++F+EM + G      
Sbjct: 256 RRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAP--- 312

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             N +   + + +  +     ++  +  ++  +  V D   Y  ++  L K  K DEA  
Sbjct: 313 --NHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKD 370

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              HA+   H P  +T+  +I ALC  G +D A  +L  M E +  P+  ++  +I  L
Sbjct: 371 MFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGL 429



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 119/248 (47%), Gaps = 8/248 (3%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL  +   ++ ++R  C      +A  V++ M   G  P+  TF  L+    KSG L  A
Sbjct: 694 GLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNA 753

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
               DQM   G  PN+ T+N LL GL   GR+ E+  +L  +K  G++P   TY  ++ G
Sbjct: 754 FSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTG 813

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           + K     EA+ L  E + +G  P V T+N L + + K G   +   L   M+ R  LP 
Sbjct: 814 YGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPT 873

Query: 295 KISYSTLLNGLLKWGKIRPAVSI---FKEMVRFGFEVDERMMNSLLRGLCMK--SWEEKD 349
             +Y  L++G   W K+R    +    K+M   GF   +  ++S+ R       SWE + 
Sbjct: 874 SCTYDILVSG---WSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARR 930

Query: 350 LLEDAYQV 357
           LL++ Y+V
Sbjct: 931 LLKNLYKV 938



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 153/304 (50%), Gaps = 18/304 (5%)

Query: 154 NVTTFTILVNSLCKSGRLK-EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           +  ++ ++++   + G L  EAL  L +M + G   +  T N +L GLC  GRV+ A  +
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPEAL--LAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAAL 159

Query: 213 L-MNVKNDGLKP-DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
             + V+  G+   DV  + +++DG+CKVG    A  +      +GV  +VV +N+L  G 
Sbjct: 160 AEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGL 219

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+ G       ++  MK+    P+ ++Y+  +    +   +  A S+++EMVR G   D 
Sbjct: 220 CRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDV 279

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
             +++L+ GLC     +     +AY +F +M K  +  +  TY ++I TL K ++ +E+L
Sbjct: 280 VTLSALVGGLC-----KDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESL 334

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA----KIPSRTSYDML 446
             L   +  G +   I +  ++  LC EGKID+A      M+ HA      P+  +Y +L
Sbjct: 335 SLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAK----DMFRHALSDNHTPNGVTYTVL 390

Query: 447 ITKL 450
           I  L
Sbjct: 391 IDAL 394



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 130/279 (46%), Gaps = 5/279 (1%)

Query: 48  NPRSLQAQRFVDRIKASPLKERI-DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           +P SL  +R +         + I +I + +   G    ++ +N L+  L        A+ 
Sbjct: 661 SPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMV 720

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
              E S  G+AP++ TF+ +I  +        A    D M  +G  PNV TF  L+  L 
Sbjct: 721 VLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLE 780

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
            +GR+ E+  VL++M + G +P+  TY+ L+ G        EA  +   +   G  P V 
Sbjct: 781 SAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVS 840

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK--EGTPMKGVGLLK 284
           TY A++  F KVG  ++A EL NE   RGV P   T++ L +G+ K   GT ++    LK
Sbjct: 841 TYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVR--KFLK 898

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
            MK++   P K + S++     K G    A  + K + +
Sbjct: 899 DMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYK 937



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 224 DVYTYTAVMDGFCKVGR-SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           D  +Y  VM GF + G  + EA  LL E  +RGV  + VT NT+  G C++G   +   L
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPEA--LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAAL 159

Query: 283 LKLMKKRNCLP--DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            ++M +   +   D + +++L++G  K G +  A ++ + M   G  VD    NSL+ GL
Sbjct: 160 AEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGL 219

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     E D   D     ++   + +V    TY + I    +    D+A       +  G
Sbjct: 220 CRAG--EVDAARDMVDTMKRDGVEPNVV---TYTMFIVEYCRRNAVDDAFSLYEEMVRKG 274

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
            +P  +T + ++  LC +G+  +A  L   M +    P+  +Y MLI  L + ++  ++ 
Sbjct: 275 VLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESL 334

Query: 461 ALYGAALKQGVI 472
           +L G  + +GV+
Sbjct: 335 SLLGEVVSRGVV 346



 Score = 41.6 bits (96), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 47/100 (47%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           VS +N L+     +     A + F+E  + G+ P S T+ I++  +    +  E RK + 
Sbjct: 839 VSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLK 898

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            M + G+ P+  T + +  +  K G   EA  +L  + ++
Sbjct: 899 DMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYKV 938


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 168/350 (48%), Gaps = 6/350 (1%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           L     A  F+ +    G+AP +  F++++R +    +   ARKV D M      P V T
Sbjct: 164 LPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVT 222

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F  L++ +C++  L     +  +M  +G KP++ TY  L+KG C  GR+E A +M   ++
Sbjct: 223 FNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMR 282

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           + G+ P+   +T ++D  CK G  N  M+L  +   RGV P++V +N L NG C+     
Sbjct: 283 DTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLK 342

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
               +++ MK     PDK++Y+TL++G  K GK+  A+ I ++M      +DE    +L+
Sbjct: 343 AAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALI 402

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            GL            DA +V  +M +     D  TY +VI    +          L    
Sbjct: 403 SGLSKAGRP-----VDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQ 457

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             G  P  +T+N ++  LC  G++  A +LL  M      P   +Y++L+
Sbjct: 458 NKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILL 507



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 174/381 (45%), Gaps = 48/381 (12%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD +++     +V  FN L+  +    + +     + E S  G+ P+ +T+  +I+ +C
Sbjct: 208 VFDEMRR-SVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFC 266

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A K+ + M D G +PN   FT L+++ CK G +   +++   M   G  P++ 
Sbjct: 267 RTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLV 326

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            YN L+ GLC    ++ A  ++  +KN GLKPD  TYT ++DG CK G+ + AM++  + 
Sbjct: 327 AYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKM 386

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            E+ V+ + VT+  L +G  K G P+    +L+ M +    PD  +Y+ +++   + G +
Sbjct: 387 AEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDV 446

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           +    + KEM   G +      N ++ GLC                              
Sbjct: 447 KTGFKLLKEMQNKGKKPGVVTYNVIMNGLC------------------------------ 476

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
                   LG+ K  D   + LH  + +G  P  IT+N ++   C  GK+  +  L    
Sbjct: 477 -------KLGQMKNAD---MLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL---- 522

Query: 432 YEHAK--IPSRTSYDMLITKL 450
            E +K  +P    Y  LI++L
Sbjct: 523 -ESSKGMVPDFAVYTSLISEL 542



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 4/276 (1%)

Query: 70  IDIFDSIKKD----GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +D  D + K+    G    V  +  L+         E AVK F+E    G+ PN+  F+ 
Sbjct: 236 LDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTT 295

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C + +      +   M   G  P++  +  LVN LC++  LK A  ++++M   G
Sbjct: 296 LIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG 355

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KP+  TY  L+ G C  G+++ A ++   +    +  D  TYTA++ G  K GR  +A 
Sbjct: 356 LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAE 415

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +L E +E  + P+  T+  + + +C++G    G  LLK M+ +   P  ++Y+ ++NGL
Sbjct: 416 RVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGL 475

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
            K G+++ A  +   M+  G   D+   N LL G C
Sbjct: 476 CKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQC 511



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 117/246 (47%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++  + +F+ ++  G N +   F  L+ A          +  + +    G+ P+   ++ 
Sbjct: 271 MENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNA 330

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C   +   A  +++ M + G  P+  T+T L++  CK G+L  A+++  +M    
Sbjct: 331 LVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKE 390

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              +  TY  L+ GL   GR  +A  +L  +    L+PD  TYT V+D FC+ G      
Sbjct: 391 VSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGF 450

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +LL E   +G  P VVT+N + NG CK G       LL  M      PD I+Y+ LL+G 
Sbjct: 451 KLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQ 510

Query: 306 LKWGKI 311
            K GK+
Sbjct: 511 CKHGKV 516



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 6/252 (2%)

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EAY   + + + G+ P+   +  +M  F ++G    A ++ +E + R V P VVTFNTL 
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDE-MRRSVQPTVVTFNTLI 227

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G C+        GL K M      PD  +Y  L+ G  + G++  AV +F EM   G  
Sbjct: 228 SGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVN 287

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +  +  +L+   C +       +     +++ M  +  + D   Y  ++  L + +   
Sbjct: 288 PNAVVFTTLIDAHCKEGN-----VNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLK 342

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            A   +      G  P  +T+  +I   C +GK+D A+ +   M E        +Y  LI
Sbjct: 343 AAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALI 402

Query: 448 TKLDQLEKSYDA 459
           + L +  +  DA
Sbjct: 403 SGLSKAGRPVDA 414



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 7/173 (4%)

Query: 69  RIDIFDSIKKDGTNWSVS----DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           ++D+   IK+      VS     +  L+  L        A +   E     L P++ T++
Sbjct: 375 KLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYT 434

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           ++I  +C K D     K++  M + G  P V T+ +++N LCK G++K A  +L  M  I
Sbjct: 435 MVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNI 494

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           G  P+  TYN LL G C  G+V  + E+     + G+ PD   YT+++    K
Sbjct: 495 GVSPDDITYNILLDGQCKHGKVANSEEL---ESSKGMVPDFAVYTSLISELAK 544


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 182/371 (49%), Gaps = 20/371 (5%)

Query: 88  FNDLLMALVMLNEQETAVKFFS-EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           FN +L AL  + +     + ++       + P+  T+ I++   C      +A +V+D M
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198

Query: 147 F--DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ-MGRI-GCKPNIQTYNCLLKGLCY 202
              D    P+V T   +V+ LCKSGR++EAL  ++Q M  + GC PN  TYNCL+   C 
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP---- 258
           VG +  AYE++  ++N+G+  ++ T   ++ G C+ GR+  A+E   E  +R V P    
Sbjct: 259 VGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGKG 316

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           N VT++TL             + L          PD I Y T+++GL + G++  A S+ 
Sbjct: 317 NAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMA 376

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
             M   GF++D +  N L+ G C      K  L +AY++ ++M +     D  TY  ++ 
Sbjct: 377 SSMKEAGFKLDTKAYNILIAGFC-----RKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 379 TLGKGKKTDEALIH--LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
             G  K  D A +   L   I+ G  P  ITF  ++   C  GKID+AL +L  M E   
Sbjct: 432 --GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGI 489

Query: 437 IPSRTSYDMLI 447
            P+   Y+ LI
Sbjct: 490 HPNNVIYNTLI 500



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 163/314 (51%), Gaps = 11/314 (3%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP----NSWTFSIM 126
           ++ + ++ +G   ++   N ++  L        A++FF E  +  + P    N+ T+S +
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT--VWPEGKGNAVTYSTL 324

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +    + N+   A ++       G+ P+   +  +++ L ++GRL++A  +   M   G 
Sbjct: 325 VGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGF 384

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           K + + YN L+ G C   R+ EAYE+L  +K  G++PDV TY  ++ G CK G      E
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDE 444

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           LL + I+ G  P+V+TF TL +GYCK G   + + +L+ M +    P+ + Y+TL++ L 
Sbjct: 445 LLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLC 504

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G +  A+ +F EM       +    N+LL+GL      +K++ E A+++ ++M ++  
Sbjct: 505 KRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL-----RDKNMPEKAFELMDQMREERC 559

Query: 367 VTDPGTYGIVIRTL 380
             D  T  +++  L
Sbjct: 560 FPDYVTVDVLMEWL 573



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 158/330 (47%), Gaps = 15/330 (4%)

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGR--IGCKPNIQTYNCLLKGLCYVGRVEEA 209
            P+V T+ ILVN LCK+GR+ +AL VLD M R  +  +P++ T N ++ GLC  GRV+EA
Sbjct: 169 RPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA 228

Query: 210 YEMLMNVKND--GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
              +    +   G  P+  TY  ++D FC+VG  + A EL+ +    GV  N+VT NT+ 
Sbjct: 229 LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIV 288

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPD----KISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
            G C+ G    G  L    +KR   P+     ++YSTL+  LL    +  A+ +F E + 
Sbjct: 289 GGLCRAGR--TGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMS 346

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D  M  +++ GL      +   LEDA  +   M +     D   Y I+I    + 
Sbjct: 347 EGHSPDAIMYFTMISGL-----TQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK 401

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           K+  EA   L    E+G  P   T+N ++   C  G       LL  M +    PS  ++
Sbjct: 402 KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF 461

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L+    ++ K  +A  +  +  + G+ P
Sbjct: 462 GTLVHGYCKVGKIDEALRILRSMDESGIHP 491



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 117/236 (49%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++F     +G +     +  ++  L      E A    S     G   ++  ++I+I  
Sbjct: 338 MELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAG 397

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C K    EA +++  M + G  P+V T+  L++  CK+G      E+L +M   GC+P+
Sbjct: 398 FCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPS 457

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + T+  L+ G C VG+++EA  +L ++   G+ P+   Y  ++D  CK G  + A+EL +
Sbjct: 458 VITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFD 517

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E  E+ V  NV TFN L  G   +  P K   L+  M++  C PD ++   L+  L
Sbjct: 518 EMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 96/206 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L++   +  S+K+ G       +N L+           A +   E    G+ P+  
Sbjct: 365 QAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVC 424

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C   DF    +++  M D+G  P+V TF  LV+  CK G++ EAL +L  M
Sbjct: 425 TYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSM 484

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN   YN L+  LC  G V+ A E+   +K   +  +V T+ A++ G       
Sbjct: 485 DESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMP 544

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLF 267
            +A EL+++  E    P+ VT + L 
Sbjct: 545 EKAFELMDQMREERCFPDYVTVDVLM 570



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 79/168 (47%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++   +K+ G    V  +N LL       +     +   +    G  P+  TF  
Sbjct: 404 LHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGT 463

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  YC      EA +++  M ++G HPN   +  L++ LCK G +  A+E+ D+M    
Sbjct: 464 LVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKS 523

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
              N+ T+N LLKGL      E+A+E++  ++ +   PD  T   +M+
Sbjct: 524 VPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 168/331 (50%), Gaps = 5/331 (1%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   GY P+V T+T ++N LCK G    A  +  +MG  GC+P++ TY+ ++  LC   R
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           V EA ++   +K  G+ P+++TY +++ G C   R  EA  +LNE +   + PN+VTF+ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L N +CKEG   +  G+LK M +    P+ ++YS+L+NG     ++  A  +F  M+  G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            + D    N L+ G C     +   + +A Q+F +M  +    D  +Y  +I  L +  +
Sbjct: 181 CKPDVFSYNILINGYC-----KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGR 235

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             EA     + +  G++P   T++ ++   C +G + KA  L   M      P+   Y++
Sbjct: 236 LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNI 295

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           LI  + +     +A  L+     QG+ P  K
Sbjct: 296 LIDAMCKSRNLKEARKLFSELFVQGLQPNMK 326



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 168/333 (50%), Gaps = 7/333 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+  T++ +I   C   +   A  +   M + G  P+V T++ +++SLCK  R+ EA
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L++   M   G  PNI TYN L++GLC   R  EA  ML  + +  + P++ T++ +++ 
Sbjct: 65  LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           FCK G   EA  +L    E GV PNVVT+++L NGY  +    +   L  +M  + C PD
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPD 184

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
             SY+ L+NG  K  +I  A  +F EM+  G   D    N+L+ GLC     +   L +A
Sbjct: 185 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLC-----QLGRLREA 239

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQ 413
           + +F+ M    ++ D  TY I++    K     +A   L  A++  ++ P  + +N +I 
Sbjct: 240 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF-RLFRAMQSTYLKPNMVMYNILID 298

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           A+C    + +A  L   ++     P+   + + 
Sbjct: 299 AMCKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 158/310 (50%), Gaps = 11/310 (3%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + K   + E +DIF  +K  G + ++  +N L+  L   +    A   
Sbjct: 43  PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAM 102

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            +E  S  + PN  TFS++I  +C + + FEAR V+  M + G  PNV T++ L+N    
Sbjct: 103 LNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSL 162

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              + EA ++ D M   GCKP++ +YN L+ G C   R+ EA ++   + + GL PD+ +
Sbjct: 163 QAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVS 222

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++DG C++GR  EA +L    +  G  P++ T++ L +G+CK+G   K   L + M+
Sbjct: 223 YNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQ 282

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG----------FEVDERMMNSLL 337
                P+ + Y+ L++ + K   ++ A  +F E+   G          FE+ +RM    +
Sbjct: 283 STYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLFEIWKRMAALRM 342

Query: 338 RGLCMKSWEE 347
             L M S E+
Sbjct: 343 NFLIMLSSED 352



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 147/270 (54%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  + + G    V  ++ ++ +L        A+  FS   + G++PN +T++ +I+  C
Sbjct: 32  LFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLC 91

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N + + EA  +++ M      PN+ TF++L+N  CK G + EA  VL  M  +G +PN+ 
Sbjct: 92  NFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVV 151

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY+ L+ G      V EA ++   +   G KPDV++Y  +++G+CK  R  EA +L NE 
Sbjct: 152 TYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEM 211

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I +G+TP++V++NTL +G C+ G   +   L K M     LPD  +YS LL+G  K G +
Sbjct: 212 IHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYL 271

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
             A  +F+ M     + +  M N L+  +C
Sbjct: 272 AKAFRLFRAMQSTYLKPNMVMYNILIDAMC 301



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 148/310 (47%), Gaps = 5/310 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V  +  ++  L  + E   A   F +    G  P+  T+S +I   C      EA
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             +   M   G  PN+ T+  L+  LC   R +EA  +L++M  +   PNI T++ L+  
Sbjct: 65  LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C  G V EA  +L  +   G++P+V TY+++M+G+       EA +L +  I +G  P+
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPD 184

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           V ++N L NGYCK     +   L   M  +   PD +SY+TL++GL + G++R A  +FK
Sbjct: 185 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 244

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            M+  G   D    + LL G C + +     L  A+++F  M       +   Y I+I  
Sbjct: 245 NMLTNGNLPDLCTYSILLDGFCKQGY-----LAKAFRLFRAMQSTYLKPNMVMYNILIDA 299

Query: 380 LGKGKKTDEA 389
           + K +   EA
Sbjct: 300 MCKSRNLKEA 309


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 202/428 (47%), Gaps = 19/428 (4%)

Query: 52  LQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA 111
           LQ  RF D ++   LKE       +K+ G    +  +N L++ L      + A  F  E 
Sbjct: 463 LQNSRFGDAMRV--LKE-------MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
              GL PN++T+   I  Y   ++F  A K +  M + G  PN    T L+N  CK G++
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
            EA      M   G   + +TY  L+ GL    +V++A E+   ++  G+ PDV++Y  +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           ++GF K+G   +A  + +E +E G+TPNV+ +N L  G+C+ G   K   LL  M  +  
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P+ ++Y T+++G  K G +  A  +F EM   G   D  +  +L+ G C       + +
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC-----RLNDV 748

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD---EALIHLHH-AIEMGHIPRTIT 407
           E A  +F    KK   +    +  +I  + K  KT+   E L  L   + +    P  +T
Sbjct: 749 ERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I  LC EG ++ A  L   M     +P+  +Y  L+   D++ +  +   ++  A+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867

Query: 468 KQGVIPQR 475
             G+ P  
Sbjct: 868 AAGIEPDH 875



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 163/357 (45%), Gaps = 6/357 (1%)

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T+  +++  C+  D   A  ++  M  +G  PNV  +T L+ +  ++ R  +A+ VL +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P+I  YN L+ GL    R++EA   L+ +  +GLKP+ +TY A + G+ +   
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A + + E  E GV PN V    L N YCK+G  ++     + M  +  L D  +Y+ 
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NGL K  K+  A  IF+EM   G   D      L+ G     + +   ++ A  +F++
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING-----FSKLGNMQKASSIFDE 652

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++    +   Y +++    +  + ++A   L      G  P  +T+  +I   C  G 
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
           + +A  L   M     +P    Y  L+    +L     A  ++G   K+G      P
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAP 768



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 171/398 (42%), Gaps = 48/398 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E    + S+   G       +  L+  L   ++ + A + F E    G+AP+ +
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++ ++I  +    +  +A  + D M + G  PNV  + +L+   C+SG +++A E+LD+M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC----- 236
              G  PN  TY  ++ G C  G + EA+ +   +K  GL PD + YT ++DG C     
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 237 -----------------------------KVGRSNEAMELLNE----AIERGVTPNVVTF 263
                                        K G++    E+LN     + +R   PN VT+
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N + +  CKEG       L   M+  N +P  I+Y++LLNG  K G+      +F E + 
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI-----VIR 378
            G E D  M + ++     +    K L+     + ++M  K +V D     I     ++ 
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALV-----LVDQMFAKNAVDDGCKLSISTCRALLS 923

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
              K  + + A   + + + + +IP + T   +I   C
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 153/327 (46%), Gaps = 45/327 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++   IFD + ++G   +V  +N LL       E E A +   E S  GL PN+ 
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL------ 175
           T+  +I  YC   D  EA ++ D M   G  P+   +T LV+  C+   ++ A+      
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758

Query: 176 ----------------------------EVLDQM-----GRIGCKPNIQTYNCLLKGLCY 202
                                       EVL+++      R G KPN  TYN ++  LC 
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCK 817

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            G +E A E+   ++N  L P V TYT++++G+ K+GR  E   + +EAI  G+ P+ + 
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD--KISYST---LLNGLLKWGKIRPAVSI 317
           ++ + N + KEG   K + L+  M  +N + D  K+S ST   LL+G  K G++  A  +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKS 344
            + MVR  +  D   +  L+   C+ S
Sbjct: 938 MENMVRLQYIPDSATVIELINESCISS 964



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 154/338 (45%), Gaps = 5/338 (1%)

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A K+ + M   G  P   T+ +L++ LCK  RL++A  +L +M  +G   +  TY+ L+ 
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GL      + A  ++  + + G+    Y Y   +    K G   +A  L +  I  G+ P
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
               + +L  GYC+E    +G  LL  MKKRN +    +Y T++ G+   G +  A +I 
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           KEM+  G   +  +  +L+     K++ +     DA +V ++M ++    D   Y  +I 
Sbjct: 441 KEMIASGCRPNVVIYTTLI-----KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L K K+ DEA   L   +E G  P   T+   I       +   A   +  M E   +P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           ++     LI +  +  K  +AC+ Y + + QG++   K
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 165/386 (42%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L  +   E A     E  S G++ ++ T+S++I       +   A+ ++  M 
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G +     +   +  + K G +++A  + D M   G  P  Q Y  L++G C    V 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           + YE+L+ +K   +    YTY  V+ G C  G  + A  ++ E I  G  PNVV + TL 
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             + +       + +LK MK++   PD   Y++L+ GL K  ++  A S   EMV  G +
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N+   G  +  + E      A +  ++M +   + +      +I    K  K  
Sbjct: 520 P-----NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA       ++ G +    T+  ++  L    K+D A  +   M      P   SY +LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +L     A +++   +++G+ P
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTP 660



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 155/359 (43%), Gaps = 5/359 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL P  +T+ ++I   C      +A+ ++  M   G   +  T+++L++ L K      A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
             ++ +M   G       Y+C +  +   G +E+A  +   +   GL P    Y ++++G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           +C+     +  ELL E  +R +  +  T+ T+  G C  G       ++K M    C P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            + Y+TL+   L+  +   A+ + KEM   G   D    NSL+ GL      +   +++A
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL-----SKAKRMDEA 506

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
                +M +     +  TYG  I    +  +   A  ++    E G +P  +    +I  
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            C +GK+ +A      M +   +    +Y +L+  L + +K  DA  ++     +G+ P
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 86/380 (22%), Positives = 152/380 (40%), Gaps = 26/380 (6%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G + +   F I+   Y  K    EA  V          P ++   +L+++L +  RL   
Sbjct: 146 GKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND--------------- 219
            +V   M       +++TY+ L+   C  G V+   ++L   + +               
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 220 ------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
                 GL P  YTY  ++DG CK+ R  +A  LL E    GV+ +  T++ L +G  K 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
                  GL+  M           Y   +  + K G +  A ++F  M+  G     +  
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            SL+ G C     EK++ +  Y++  +M K+  V  P TYG V++ +      D A   +
Sbjct: 386 ASLIEGYC----REKNVRQ-GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
              I  G  P  + +  +I+      +   A+ +L  M E    P    Y+ LI  L + 
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500

Query: 454 EKSYDACALYGAALKQGVIP 473
           ++  +A +     ++ G+ P
Sbjct: 501 KRMDEARSFLVEMVENGLKP 520



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 109/291 (37%), Gaps = 37/291 (12%)

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-------------------GVTPNVVT 262
           K D +++ A+    C  G   +A+ ++   IER                   G + + V 
Sbjct: 96  KLDSFSFLAL--DLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVL 153

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           F  LF+GY  +    + V +         +P       LL+ LL+W ++     ++K MV
Sbjct: 154 FGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEE--KDLL--------------EDAYQVFEKMTKKVS 366
                 D +  + L+   C     +  KD+L              + A ++ E M  K  
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           V    TY ++I  L K K+ ++A   L     +G      T++ +I  L      D A  
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
           L+  M  H        YD  I  + +      A AL+   +  G+IPQ + 
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384


>gi|218196744|gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indica Group]
          Length = 633

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 190/388 (48%), Gaps = 9/388 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY-CNKNDFFEARKVIDCM 146
           F  +  AL   +    A+      ++ G+AP++   ++++  Y C    F  A +V+  M
Sbjct: 185 FTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWM 244

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
             NG  P+V T++ L++ LC +G++ EAL VLD M   GC+PN  TY  ++   C  GR+
Sbjct: 245 VANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRI 304

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            EA  +L  +   G  P   TY  +++  CKVG   E   LL E+  +G TP+V+T+++ 
Sbjct: 305 HEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSY 364

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G CK G   K   L+  M      P +++ + LL+G+ +      A  + +     G+
Sbjct: 365 MDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGW 424

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + +    N+++R LC    +E+  L    ++F  M KK    +  T+ IV+ +L K  + 
Sbjct: 425 DANVVNYNTVMRRLC----DERRWLS-VVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRL 479

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +AL  L        +   IT+N +I+ L   G+ ++  LLL+ M E    P+  +Y ++
Sbjct: 480 HKALCLLR---SKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLV 536

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQ 474
           I  L + EK   A   +  +L+    P 
Sbjct: 537 IDCLCREEKFLVALCCFYQSLEDDFFPS 564



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 158/361 (43%), Gaps = 43/361 (11%)

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
           +G    V  ++ L+  L    +   A+         G  PN+ T++ ++  YC      E
Sbjct: 247 NGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHE 306

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A+++++ M  +G+ P+  T+ +LV +LCK G  +E   +L++    G  P++ TY+  + 
Sbjct: 307 AKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMD 366

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC  GR+++++ ++  + ++GL+P   T   ++DG C+   +  A  LL  + E G   
Sbjct: 367 GLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDA 426

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           NVV +NT+    C E   +  V L   M K+   P+  +++ +++ L K G++  A+ + 
Sbjct: 427 NVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALCLL 486

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           +                                            K  V    TY  +IR
Sbjct: 487 R-------------------------------------------SKEFVATVITYNTLIR 503

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L    + +E  + L+  IE G  P  IT++ VI  LC E K   AL   +   E    P
Sbjct: 504 HLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCREEKFLVALCCFYQSLEDDFFP 563

Query: 439 S 439
           S
Sbjct: 564 S 564



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/330 (19%), Positives = 139/330 (42%), Gaps = 34/330 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   + +++   G   S + +N L+ AL  +   E       E+++ G  P+  T+S 
Sbjct: 304 IHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSS 363

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +   C      ++  ++D M  NG  P+  T  IL++ +C+S     A  +L+    +G
Sbjct: 364 YMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELG 423

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR----- 240
              N+  YN +++ LC   R     ++  ++   G+ P+ +T+  V+   CK+GR     
Sbjct: 424 WDANVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKAL 483

Query: 241 ---------------------------SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
                                       NE   LL + IE G+ PN +T++ + +  C+E
Sbjct: 484 CLLRSKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCRE 543

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
              +  +       + +  P   ++ +++ GL+  G +    ++   ++  GF ++  + 
Sbjct: 544 EKFLVALCCFYQSLEDDFFPS--AFLSIIRGLIVGGMLGQLHTLIGCVLGQGFIIEVYIY 601

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
             L++ LC   + +   +     + E+M +
Sbjct: 602 QELIKALCKNGYCQSVEMYKVCHILERMLR 631



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 117/289 (40%), Gaps = 43/289 (14%)

Query: 222 KPDVYTYT----------------AVMDGF--------------------CKVGRSNEAM 245
           +PD   +T                AV+D                      C++ R + A 
Sbjct: 179 RPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAY 238

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E++   +  GV P+VVT++TL +G C  G   + +G+L LM +  C P+  +Y+ +++  
Sbjct: 239 EVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAY 298

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKK 364
              G+I  A  +   M+  GF       N L+  LC + ++EE D L       E+ T K
Sbjct: 299 CTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDAL------LEESTAK 352

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY   +  L K  + D++   +   +  G  P  +T N ++  +C       A
Sbjct: 353 GWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAA 412

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             LL    E     +  +Y+ ++ +L    +      L+    K+G+ P
Sbjct: 413 KRLLECSAELGWDANVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAP 461



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 3/176 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + +   + D +  +G   S    N LL  +   +    A +    ++  G   N  
Sbjct: 370 KAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANVV 429

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ ++R  C++  +    K+   M   G  PN  TF I+V+SLCK GRL +AL +L   
Sbjct: 430 NYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALCLLRSK 489

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
             +     + TYN L++ L   G   E   +L  +   G+ P+  TY+ V+D  C+
Sbjct: 490 EFVA---TVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCR 542


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 204/436 (46%), Gaps = 49/436 (11%)

Query: 81  TNWSVSD---FNDLLMALVMLNEQETAVK-FFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           T W V+D   F+ LL  L      + A          +G  P+ +++SI+++ +CN+   
Sbjct: 121 TGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRA 180

Query: 137 FEARKVIDCMFDNG---YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
            EA +++  M D+G   + PNV T+T +++ LCK+  +  A  V   M   G +PN  TY
Sbjct: 181 EEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTY 240

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
            CL+ G   +G+ +E  +ML  +   GL+PD Y Y  ++D  CK GR  EA  + +  I 
Sbjct: 241 TCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIR 300

Query: 254 RGVTPNVVT-----------------------------------FNTLFNGYCKEGTPMK 278
           +G+ PNV                                     FN +F  Y K+    +
Sbjct: 301 KGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDE 360

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            + +   M+++   P+ ++Y  L++ L K G++  AV  F +M+  G   D  + +SL+ 
Sbjct: 361 AMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVY 420

Query: 339 GLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
           GLC +  WE+ + L      FE + + + + D   +  ++  L +  +  EA   +   +
Sbjct: 421 GLCTVDKWEKAEEL-----FFEVLDQGIRL-DTVFFNTLMCNLCREGRVMEAQRLIDLML 474

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
            +G  P  I++N ++   C  G+ID+A  LL ++      P + +Y+ L+    +  +  
Sbjct: 475 RVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRID 534

Query: 458 DACALYGAALKQGVIP 473
           DA +L+   L +G+ P
Sbjct: 535 DAYSLFREMLMKGLTP 550



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 216/468 (46%), Gaps = 44/468 (9%)

Query: 50  RSLQAQRFV-DRIKASPL--KERIDIFDSIKKDGTNWSVSDFNDLLMALVML---NEQET 103
           R L+ +R + DR  +  L   + + +FD +       SV  FN LL A+      +  E 
Sbjct: 13  RCLELERVIADRAHSGSLGLNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASEL 72

Query: 104 AVKFFSE---ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT-FT 159
            V  F+      S  +AP+S+T++I+I C+C              +   G+  N T  F+
Sbjct: 73  VVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFS 132

Query: 160 ILVNSLCKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
            L+  LC + R+ EA ++L  +M   GC P++ +Y+ LLKG C   R EEA E+L  + +
Sbjct: 133 QLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMAD 192

Query: 219 DG---LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           DG     P+V TYT V+DG CK    + A  +    I++GV PN  T+  L +GY   G 
Sbjct: 193 DGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGK 252

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             + V +L+ M      PD   Y+ LL+ L K G+   A +IF  ++R G + +  +   
Sbjct: 253 WKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGI 312

Query: 336 LLRGLCMK------------------------------SWEEKDLLEDAYQVFEKMTKKV 365
           LL G   +                              ++ +K ++++A  +F+KM ++ 
Sbjct: 313 LLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQR 372

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TYG +I  L K  + D+A++  +  I+ G  P    F++++  LC   K +KA 
Sbjct: 373 LSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAE 432

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L F + +         ++ L+  L +  +  +A  L    L+ GV P
Sbjct: 433 ELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRP 480



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 207/470 (44%), Gaps = 41/470 (8%)

Query: 40  AESLDLKENPRSLQAQRFVDRIKASPLKERID-IFDSIKKDGTNWSVSDFNDLLMALVML 98
           A+  D    P  +     +D +  + + +R   +F  +   G   +   +  L+   + +
Sbjct: 191 ADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSI 250

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
            + +  V+   E S++GL P+ + +++++   C      EAR + D +   G  PNVT +
Sbjct: 251 GKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIY 310

Query: 159 TILVNSLCKSGRLKE-----------------------------------ALEVLDQMGR 183
            IL++     G L E                                   A+ + D+M +
Sbjct: 311 GILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQ 370

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               PNI TY  L+  LC +GRV++A      + ++G+ PD++ +++++ G C V +  +
Sbjct: 371 QRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEK 430

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A EL  E +++G+  + V FNTL    C+EG  M+   L+ LM +    PD ISY+TL++
Sbjct: 431 AEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVD 490

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           G    G+I  A  +   +V  G + D+   N+LL G C     +   ++DAY +F +M  
Sbjct: 491 GHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYC-----KARRIDDAYSLFREMLM 545

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           K    D  TY  ++  L +  +  EA       I         T+N +I  LC    +D+
Sbjct: 546 KGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDE 605

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A  +   +          + +++I  L +  +  DA  L+      G++P
Sbjct: 606 AFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVP 655



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 191/415 (46%), Gaps = 40/415 (9%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  +IFDS+ + G   +V+ +  LL              F       G++P+   F+IM 
Sbjct: 290 EARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMF 349

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             Y  K    EA  + D M      PN+ T+  L+++LCK GR+ +A+   +QM   G  
Sbjct: 350 CAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMT 409

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK------------------------- 222
           P+I  ++ L+ GLC V + E+A E+   V + G++                         
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRL 469

Query: 223 ----------PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
                     PDV +Y  ++DG C  GR +EA +LL+  +  G+ P+ VT+NTL +GYCK
Sbjct: 470 IDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCK 529

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                    L + M  +   PD ++Y+T+L+GL + G+   A  ++  M+    +++   
Sbjct: 530 ARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYT 589

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N ++ GLC     + + +++A+++F  +  K    D  T  I+I  L KG + ++A+  
Sbjct: 590 YNIIINGLC-----KNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDL 644

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                  G +P   T+  + + L  EG +++   L   M E+   P+    + L+
Sbjct: 645 FATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALV 699



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 188/369 (50%), Gaps = 7/369 (1%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           F    K + + E + IFD +++   + ++  +  L+ AL  L   + AV  F++    G+
Sbjct: 349 FCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGM 408

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P+ + FS ++   C  + + +A ++   + D G   +   F  L+ +LC+ GR+ EA  
Sbjct: 409 TPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQR 468

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           ++D M R+G +P++ +YN L+ G C  GR++EA ++L  + + GLKPD  TY  ++ G+C
Sbjct: 469 LIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYC 528

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K  R ++A  L  E + +G+TP+VVT+NT+ +G  + G   +   L   M       +  
Sbjct: 529 KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 588

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y+ ++NGL K   +  A  +F  +     ++D    N ++ G  +K   +    EDA  
Sbjct: 589 TYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMI-GALLKGGRK----EDAMD 643

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-GHIPRTITFNNVIQAL 415
           +F  ++    V D  TY ++   L K    +E L  L  A+E  G  P +   N +++ L
Sbjct: 644 LFATISAYGLVPDVETYCLIAENLIKEGSLEE-LDELFSAMEENGTAPNSRMLNALVRWL 702

Query: 416 CGEGKIDKA 424
              G I++A
Sbjct: 703 LHRGDINRA 711


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 190/410 (46%), Gaps = 5/410 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L++  D+F  +   G    +  +N L+     +   E A +   E     L  N++
Sbjct: 384 KIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAY 443

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
               ++   C+  D   A ++   M   G  PN+  +T +V  L K GR +EA+++L  M
Sbjct: 444 MCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVM 503

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++  YN ++ G C  G++EE    L+ +   GLKP+VYTY A + G+C+ G  
Sbjct: 504 KDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEM 563

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A     E ++ G+ PN V    L +GYCK+G   K     + M  +  LPD  ++S L
Sbjct: 564 QAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVL 623

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K GK++ A+ +F E++  G   D     SL+  LC    +E D L+ A+++ + M
Sbjct: 624 IHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLC----KEGD-LKAAFELHDDM 678

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            KK    +  TY  +I  L K  +  +A        E G    ++T++ +I   C    +
Sbjct: 679 CKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANL 738

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
            +A  L   M      P    Y  LI    +   +  A +L+   +++G+
Sbjct: 739 TEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 188/394 (47%), Gaps = 30/394 (7%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E  + GL P+   ++ +I  +  ++D   A +V + MF      N  T+  L++ LCK
Sbjct: 325 LDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCK 384

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G L++A ++  +M  +G KP+IQTYNCL++G   V  +E+AYE+L+ +K + L  + Y 
Sbjct: 385 IGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYM 444

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
             A+++G C  G    A EL  E I  G+ PN+V + T+  G  KEG   + + +L +MK
Sbjct: 445 CGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMK 504

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC----MK 343
            +   PD   Y+T++ G  K GK+    S   EM+  G + +     + + G C    M+
Sbjct: 505 DQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQ 564

Query: 344 SWEEK-----------------DLLE---------DAYQVFEKMTKKVSVTDPGTYGIVI 377
           + E                   DL++          A+  F  M  +  + D  T+ ++I
Sbjct: 565 AAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLI 624

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L K  K  EA+      ++ G +P   T+ ++I  LC EG +  A  L   M +    
Sbjct: 625 HGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGIN 684

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           P+  +Y+ LI  L +L +   A  L+    ++G+
Sbjct: 685 PNIVTYNALINGLCKLGEIAKARELFDGIPEKGL 718



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 191/413 (46%), Gaps = 6/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K    +E I I   +K  G +  V  +N +++      + E    +  E  + GL PN 
Sbjct: 488 VKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNV 547

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T+   I  YC   +   A +    M D+G  PN    T L++  CK G   +A      
Sbjct: 548 YTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRC 607

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P++QT++ L+ GL   G+++EA  +   + + GL PDV+TYT+++   CK G 
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A EL ++  ++G+ PN+VT+N L NG CK G   K   L   + ++    + ++YST
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++ G  K   +  A  +F  M   G   D  +  +L+ G C     EK     A  +F  
Sbjct: 728 IIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEK-----ALSLFLG 782

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++   + P  +  +I    K  K  EA   +   ++    P  +T+  +I+  C  G 
Sbjct: 783 MVEEGIASTPA-FNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGN 841

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           I +A  L   M +   +P+  +Y  L+   +++ +  +  +L+   + +G+ P
Sbjct: 842 IKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKP 894



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 167/350 (47%), Gaps = 17/350 (4%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNK--NDFFEARKVIDCMFDNGYH-------PNVTT 157
           F +EA S  L   +  F + + C CN    D  +  +V   +F   Y        P+V T
Sbjct: 178 FLNEAVSVFLGAKTNEFIVGLAC-CNSLSKDLLKGNRVE--LFWKVYKGMLGAIVPDVYT 234

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           +T L+N+ C+ G+++E   VL  M   GC PN+ TY+ ++ GLC  G V+EA E+  ++ 
Sbjct: 235 YTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMA 294

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           N GL PD Y Y  ++DGFC+  RS E   +L+E    G+ P+ V +  L NG+ K+    
Sbjct: 295 NKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIG 354

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
               + + M  R    +  +Y  L++GL K G +  A  +F EM   G + D +  N L+
Sbjct: 355 GAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLI 414

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            G     + +   +E AY++  ++ K+    +    G ++  L        A       I
Sbjct: 415 EG-----YYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             G  P  + +  +++ L  EG+ ++A+ +L +M +    P    Y+ +I
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVI 519



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 183/419 (43%), Gaps = 31/419 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++E       +   G   +V  +   +       E + A + F E    G+APN  
Sbjct: 524 KAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
             + +I  YC   +  +A     CM D G  P+V T ++L++ L K+G+L+EA+ V  ++
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSEL 643

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ TY  L+  LC  G ++ A+E+  ++   G+ P++ TY A+++G CK+G  
Sbjct: 644 LDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEI 703

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A EL +   E+G+  N VT++T+  GYCK     +   L   MK     PD   Y  L
Sbjct: 704 AKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCAL 763

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL--CMKSWEEKDLLED------ 353
           ++G  K G    A+S+F  MV  G        N+L+ G     K  E   L+ED      
Sbjct: 764 IDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHI 822

Query: 354 ----------------------AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
                                 A Q+F +M K+  + +  TY  ++    +  +  E   
Sbjct: 823 TPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFS 882

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                +  G  P  + ++ ++ A   EG   KAL L+  M        +  Y +LI  L
Sbjct: 883 LFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDAL 941



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 164/329 (49%), Gaps = 6/329 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   LK   ++ D + K G N ++  +N L+  L  L E   A + F      GLA NS 
Sbjct: 664 KEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSV 723

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  YC   +  EA ++   M   G  P+   +  L++  CK+G  ++AL +   M
Sbjct: 724 TYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGM 783

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +   +N L+ G   +G++ EAY+++ ++ ++ + P+  TYT +++  C VG  
Sbjct: 784 VEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNI 842

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +L  E  +R V PNV+T+ +L +GY + G   +   L   M  R   PD +++S +
Sbjct: 843 KEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVM 902

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++  LK G    A+ +  +M+  G  V + +   L+  LC     + + L +  +V +++
Sbjct: 903 VDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALC-----KHNNLSEVLKVLDEV 957

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
            K+ S     T G ++    +  +TDEAL
Sbjct: 958 EKQGSKLSLATCGTLVCCFHRAGRTDEAL 986



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 174/424 (41%), Gaps = 63/424 (14%)

Query: 107 FFSEASSYGL-APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV---------- 155
           FF+  +S  + + N  TFSI+    CN   F  A  V++ M D   +P+V          
Sbjct: 93  FFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDT-RNPHVKILDSIIKCY 151

Query: 156 ------------TTFTILVNSLCKSGRLKEALEVL--------------------DQM-- 181
                         F IL++   K G L EA+ V                     D +  
Sbjct: 152 KEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKG 211

Query: 182 -----------GRIGC-KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
                      G +G   P++ TY  L+   C VG+VEE   +L +++  G  P++ TY+
Sbjct: 212 NRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYS 271

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            V+ G C+ G  +EA+EL      +G+ P+   + TL +G+C++    +G  +L  M   
Sbjct: 272 VVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTM 331

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD ++Y+ L+NG +K   I  A  + +EM     +++     +L+ GLC     +  
Sbjct: 332 GLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLC-----KIG 386

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            LE A  +F +MT      D  TY  +I    K +  ++A   L    +           
Sbjct: 387 DLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCG 446

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            ++  LC  G + +A  L   M      P+   Y  ++  L +  +  +A  + G    Q
Sbjct: 447 AIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQ 506

Query: 470 GVIP 473
           G+ P
Sbjct: 507 GLSP 510


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 207/444 (46%), Gaps = 41/444 (9%)

Query: 66   LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            LKE +D+   ++  G   +    N +++    +   E A   F E S+ G+ P+S T+  
Sbjct: 777  LKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKY 836

Query: 126  MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +I  YC   +  EA + I  M + G+  +  T T+++ + C+   +  A+    ++ ++G
Sbjct: 837  IIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMG 896

Query: 186  CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              PN+  Y+ ++ GLC  G V++A+E+L  +  +G KP+VYT+T+++ G CK G +  A 
Sbjct: 897  LSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAF 956

Query: 246  ELLNEAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L  + I      PNV T+  + +GYCKE    +   L + MK++  +P+  +Y+TL++G
Sbjct: 957  RLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDG 1016

Query: 305  LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
              K G    A  + + M   GF  +    NS++ GLC     ++   E+A+++     + 
Sbjct: 1017 HCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLC-----KRGRAEEAFKLLNTGFQN 1071

Query: 365  VSVTDPGTYGIVIRTLGKGKKTDEAL--------------IHLH---------------- 394
                D  TY I+I    K    ++AL              IHL+                
Sbjct: 1072 QIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDS 1131

Query: 395  -----HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
                   I++G  P   T+ ++I   C E K+  A+     M +H   P   SY  LI+ 
Sbjct: 1132 EKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISG 1191

Query: 450  LDQLEKSYDACALYGAALKQGVIP 473
            L +  +  +A  LY   + +G+ P
Sbjct: 1192 LCKESRLDEARQLYDTMIDKGLSP 1215



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 166/358 (46%), Gaps = 6/358 (1%)

Query: 72   IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
             F  + K G + ++ +++ ++  L      + A +   E    G  PN +T + +I   C
Sbjct: 888  FFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLC 947

Query: 132  NKNDFFEA-RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             K     A R  +  +  + Y PNV T+T +++  CK  +L  A  + ++M   G  PN 
Sbjct: 948  KKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNT 1007

Query: 191  QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             TY  L+ G C  G   +AYE++  + N+G  P+  TY +++DG CK GR+ EA +LLN 
Sbjct: 1008 NTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNT 1067

Query: 251  AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
              +  +  + VT+  L +  CK     + +  L  M K    PD   Y+TL+    +   
Sbjct: 1068 GFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNM 1127

Query: 311  IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
            ++ +  +F E+++ G    +    S++ G C    E+K  L  A + F+KM+      D 
Sbjct: 1128 MKDSEKLFDEVIKLGLAPTKETYTSMICGYCR---EKKVSL--AVKFFQKMSDHGCAPDS 1182

Query: 371  GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             +YG +I  L K  + DEA       I+ G  P  +T   +    C       A+++L
Sbjct: 1183 ISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVIL 1240



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 164/373 (43%), Gaps = 44/373 (11%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNS 120
            K   +K+  ++ + + K+G   +V     L+  L      E A + F +   S    PN 
Sbjct: 913  KRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNV 972

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             T++ MI  YC +     A  + + M + G  PN  T+T L++  CK+G   +A E+++ 
Sbjct: 973  HTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMEL 1032

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML-----MNVKNDGL-------------- 221
            M   G  PN  TYN ++ GLC  GR EEA+++L       ++ DG+              
Sbjct: 1033 MSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRAD 1092

Query: 222  ----------------KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
                            +PD++ YT ++  FC+     ++ +L +E I+ G+ P   T+ +
Sbjct: 1093 MNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTS 1152

Query: 266  LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
            +  GYC+E      V   + M    C PD ISY  L++GL K  ++  A  ++  M+  G
Sbjct: 1153 MICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKG 1212

Query: 326  FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                E    +L    C     + +    A  + E++ KK+ +    T   +IR L   KK
Sbjct: 1213 LSPCEVTRVTLTYEYC-----KTEDFASAMVILERLNKKLWIR---TVHTLIRKLCCEKK 1264

Query: 386  TDEALIHLHHAIE 398
               A +  H  ++
Sbjct: 1265 VALAALFFHKLLD 1277



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 159/351 (45%), Gaps = 26/351 (7%)

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T S++ +C     +   A +V++CM               V    + G+LKEA++++  M
Sbjct: 748  TMSLVGKC-----NLERAHEVVECM---------------VGVFAEIGKLKEAVDMILDM 787

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               G     +  N ++     +  VE A  +   +   G+ PD  TY  ++ G+C+ G  
Sbjct: 788  RNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNV 847

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             EA   + E +ERG   +  T   +   +C++    + V     + K    P+ I+YS++
Sbjct: 848  LEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSM 907

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            ++GL K G ++ A  + +EMV+ G++ +     SL+ GLC K W E+     A+++F K+
Sbjct: 908  ISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER-----AFRLFLKL 962

Query: 362  TKKVSVT-DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
             +  +   +  TY  +I    K +K   A +      E G +P T T+  +I   C  G 
Sbjct: 963  IRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGN 1022

Query: 421  IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
              KA  L+ LM      P+  +Y+ ++  L +  ++ +A  L     +  +
Sbjct: 1023 FSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQI 1073



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 135/283 (47%), Gaps = 4/283 (1%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            KA    +  ++ + +  +G   +   +N ++  L      E A K  +      +  +  
Sbjct: 1019 KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGV 1078

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T++I+I   C + D  +A   ++ MF  G+ P++  +T L+ + C+   +K++ ++ D++
Sbjct: 1079 TYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV 1138

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             ++G  P  +TY  ++ G C   +V  A +    + + G  PD  +Y A++ G CK  R 
Sbjct: 1139 IKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRL 1198

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +EA +L +  I++G++P  VT  TL   YCK       + +L+ + K+  +    +  TL
Sbjct: 1199 DEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIR---TVHTL 1255

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            +  L    K+  A   F +++     VD R+  +     C++S
Sbjct: 1256 IRKLCCEKKVALAALFFHKLLDKEVNVD-RVTLAAFNTACIES 1297



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 12/153 (7%)

Query: 59   DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
            ++ K + + + +   + + K G    +  +  L+ A    N  + + K F E    GLAP
Sbjct: 1086 EQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAP 1145

Query: 119  NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
               T++ MI  YC +     A K    M D+G  P+  ++  L++ LCK  RL EA ++ 
Sbjct: 1146 TKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLY 1205

Query: 179  DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            D M   G  P            C V RV   YE
Sbjct: 1206 DTMIDKGLSP------------CEVTRVTLTYE 1226


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 211/457 (46%), Gaps = 69/457 (15%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ + +K +G    +  +N L+     + +  TA K   E S   L PN  T++ +I  
Sbjct: 37  VELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDA 96

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC      +A  + D M      P+V T+T ++N LCKSG+++EA  V  +M  +G  PN
Sbjct: 97  YCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPN 156

Query: 190 -----------------------------------IQTYNCLLKGLCYVGRVEEAYEMLM 214
                                              +  Y  L+ GL   G    A +M  
Sbjct: 157 RFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQ 216

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +  + L P+  TY+A++DG CK+G  N+   LL E  E+ + PNV+ ++++ +GY K+G
Sbjct: 217 VLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKG 276

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE----VDE 330
              + + +++ M +RN LP+   Y TL++G  K  +   A+ +FKEM   G E    V +
Sbjct: 277 LLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVID 336

Query: 331 RMMNSLLRGLCMKSWEE--KDLL------------------------EDAYQVFEKMTKK 364
             +N+L R   M+  +E  KD++                         DA+ + ++MT+K
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            S  D   Y ++I  L K  K +    H     ++G  P + TFN +I A C EG +  A
Sbjct: 397 SSGFDVVAYNVLINGLFKLGKYESESFHTGMR-QLGLAPDSATFNTMINAYCKEGNLGNA 455

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKSYD 458
           L LL  M  +   P+  + ++L+ +L    ++EK+ D
Sbjct: 456 LKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 146/292 (50%), Gaps = 5/292 (1%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + FN ++ A         A+K  +E  SYGL PNS T +I+++  C   +  +   +++ 
Sbjct: 437 ATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLND 496

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G+HP  TT   ++++  KS R    L + DQ+  +G K ++ TYN L+   C +G 
Sbjct: 497 MLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGM 556

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +  A  +  ++   G+  D+ TY A++ G+C      +A  + ++ +  GV+PNV T+N 
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNI 616

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L  G        +  GL+  MK+R  +P+  +Y  L++G  K G ++  V ++ EM+  G
Sbjct: 617 LLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKG 676

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F    R  N L+   C    ++   +  A ++ ++M  +    +  TY I+I
Sbjct: 677 FVPKTRTYNVLIS--CFAKGKK---MSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 171/349 (48%), Gaps = 17/349 (4%)

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
           +E+      M   G  P+  TF  ++N+ CK G L  AL++L++M   G KPN  T N L
Sbjct: 418 YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNIL 477

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           ++ LC  G +E+  ++L ++   G  P   T+ AV+D   K  R++  + + ++ +  GV
Sbjct: 478 VQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGV 537

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
             ++ T+NTL + +C+ G   +   + K M  +  L D I+Y+ L++G      ++ A +
Sbjct: 538 KLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFA 597

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           +  +M+  G   +    N LL GL         L+++A  +  +M ++  V +  TY I+
Sbjct: 598 VHSQMLTEGVSPNVETYNILLGGL-----SAARLIKEAAGLVNQMKERGLVPNATTYDIL 652

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +   GK     E +      I  G +P+T T+N +I       K+ +A  L+  M     
Sbjct: 653 VSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGI 712

Query: 437 IPSRTSYDMLIT---KLDQ-------LEKSYDACA--LYGAALKQGVIP 473
            P+ ++YD+LI    KL +       L++SY A A  L+    ++G IP
Sbjct: 713 PPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 111/501 (22%), Positives = 187/501 (37%), Gaps = 109/501 (21%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G  + V  +  L+  L        A   F       L PN  T+S +I  +C   D  + 
Sbjct: 187 GIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKG 246

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             ++  M +    PNV  ++ +V+   K G L EA++V+ +M +    PN+  Y  L+ G
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306

Query: 200 -----------------------------------LCYVGRVEEAYEMLMNVKNDGLKPD 224
                                              L   GR+EEA E+  ++ + GL PD
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIER------------------------------ 254
              YT++MDGF K G+ ++A  +  E  E+                              
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTG 426

Query: 255 ----GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G+ P+  TFNT+ N YCKEG     + LL  MK     P+ I+ + L+  L   G+
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 311 IRPAVSIFKEMVRFGF-----------------------------------EVDERMMNS 335
           I   + +  +M+  GF                                   ++D    N+
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+   C        ++  A  VF+ M  K  + D  TY  +I          +A      
Sbjct: 547 LISTFC-----RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQ 601

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
            +  G  P   T+N ++  L     I +A  L+  M E   +P+ T+YD+L++   ++  
Sbjct: 602 MLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGN 661

Query: 456 SYDACALYGAALKQGVIPQRK 476
             +   LY   + +G +P+ +
Sbjct: 662 MKECVKLYCEMITKGFVPKTR 682



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 40/262 (15%)

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG---TPM 277
           ++  V  +  ++DG+C+ G  + A+ELL      G  P++VT+NTL NG+CK G   T  
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 278 KGVGLLKLMK----------------KRNCL----------------PDKISYSTLLNGL 305
           K +G + L+                 K  CL                PD ++Y+ ++NGL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GK+  A S+F+EM   G   +     +L+  L    ++E ++ E A+ +  +M  + 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSL----FKEGNVAE-AFVLQGRMVVRG 187

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D   Y  ++  L K    + A       +E   +P  +T++ +I   C  G ++K  
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
           LLL  M E    P+   Y  ++
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIV 269


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 202/428 (47%), Gaps = 19/428 (4%)

Query: 52  LQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA 111
           LQ  RF D ++   LKE       +K+ G    +  +N L++ L      + A  F  E 
Sbjct: 463 LQNSRFGDAMRV--LKE-------MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
              GL PN++T+   I  Y   ++F  A K +  M + G  PN    T L+N  CK G++
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
            EA      M   G   + +TY  L+ GL    +V++A E+   ++  G+ PDV++Y  +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           ++GF K+G   +A  + +E +E G+TPNV+ +N L  G+C+ G   K   LL  M  +  
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P+ ++Y T+++G  K G +  A  +F EM   G   D  +  +L+ G C       + +
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC-----RLNDV 748

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD---EALIHLHH-AIEMGHIPRTIT 407
           E A  +F    KK   +    +  +I  + K  KT+   E L  L   + +    P  +T
Sbjct: 749 ERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I  LC EG ++ A  L   M     +P+  +Y  L+   D++ +  +   ++  A+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867

Query: 468 KQGVIPQR 475
             G+ P  
Sbjct: 868 AAGIEPDH 875



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 163/357 (45%), Gaps = 6/357 (1%)

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T+  +++  C+  D   A  ++  M  +G  PNV  +T L+ +  ++ R  +A+ VL +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P+I  YN L+ GL    R++EA   L+ +  +GLKP+ +TY A + G+ +   
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A + + E  E GV PN V    L N YCK+G  ++     + M  +  L D  +Y+ 
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NGL K  K+  A  IF+EM   G   D      L+ G     + +   ++ A  +F++
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING-----FSKLGNMQKASSIFDE 652

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++    +   Y +++    +  + ++A   L      G  P  +T+  +I   C  G 
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
           + +A  L   M     +P    Y  L+    +L     A  ++G   K+G      P
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAP 768



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 171/398 (42%), Gaps = 48/398 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E    + S+   G       +  L+  L   ++ + A + F E    G+AP+ +
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++ ++I  +    +  +A  + D M + G  PNV  + +L+   C+SG +++A E+LD+M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC----- 236
              G  PN  TY  ++ G C  G + EA+ +   +K  GL PD + YT ++DG C     
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 237 -----------------------------KVGRSNEAMELLNE----AIERGVTPNVVTF 263
                                        K G++    E+LN     + +R   PN VT+
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N + +  CKEG       L   M+  N +P  I+Y++LLNG  K G+      +F E + 
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI-----VIR 378
            G E D  M + ++     +    K L+     + ++M  K +V D     I     ++ 
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALV-----LVDQMFAKNAVDDGCKLSISTCRALLS 923

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
              K  + + A   + + + + +IP + T   +I   C
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 153/327 (46%), Gaps = 45/327 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++   IFD + ++G   +V  +N LL       E E A +   E S  GL PN+ 
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL------ 175
           T+  +I  YC   D  EA ++ D M   G  P+   +T LV+  C+   ++ A+      
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758

Query: 176 ----------------------------EVLDQM-----GRIGCKPNIQTYNCLLKGLCY 202
                                       EVL+++      R G KPN  TYN ++  LC 
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCK 817

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            G +E A E+   ++N  L P V TYT++++G+ K+GR  E   + +EAI  G+ P+ + 
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD--KISYST---LLNGLLKWGKIRPAVSI 317
           ++ + N + KEG   K + L+  M  +N + D  K+S ST   LL+G  K G++  A  +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKS 344
            + MVR  +  D   +  L+   C+ S
Sbjct: 938 MENMVRLQYIPDSATVIELINESCISS 964



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 154/338 (45%), Gaps = 5/338 (1%)

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A K+ + M   G  P   T+ +L++ LCK  RL++A  +L +M  +G   +  TY+ L+ 
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GL      + A  ++  + + G+    Y Y   +    K G   +A  L +  I  G+ P
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
               + +L  GYC+E    +G  LL  MKKRN +    +Y T++ G+   G +  A +I 
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           KEM+  G   +  +  +L+     K++ +     DA +V ++M ++    D   Y  +I 
Sbjct: 441 KEMIASGCRPNVVIYTTLI-----KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L K K+ DEA   L   +E G  P   T+   I       +   A   +  M E   +P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           ++     LI +  +  K  +AC+ Y + + QG++   K
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 165/386 (42%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L  +   E A     E  S G++ ++ T+S++I       +   A+ ++  M 
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G +     +   +  + K G +++A  + D M   G  P  Q Y  L++G C    V 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           + YE+L+ +K   +    YTY  V+ G C  G  + A  ++ E I  G  PNVV + TL 
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             + +       + +LK MK++   PD   Y++L+ GL K  ++  A S   EMV  G +
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N+   G  +  + E      A +  ++M +   + +      +I    K  K  
Sbjct: 520 P-----NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA       ++ G +    T+  ++  L    K+D A  +   M      P   SY +LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +L     A +++   +++G+ P
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTP 660



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 155/359 (43%), Gaps = 5/359 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL P  +T+ ++I   C      +A+ ++  M   G   +  T+++L++ L K      A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
             ++ +M   G       Y+C +  +   G +E+A  +   +   GL P    Y ++++G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           +C+     +  ELL E  +R +  +  T+ T+  G C  G       ++K M    C P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            + Y+TL+   L+  +   A+ + KEM   G   D    NSL+ GL      +   +++A
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL-----SKAKRMDEA 506

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
                +M +     +  TYG  I    +  +   A  ++    E G +P  +    +I  
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            C +GK+ +A      M +   +    +Y +L+  L + +K  DA  ++     +G+ P
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 86/380 (22%), Positives = 152/380 (40%), Gaps = 26/380 (6%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G + +   F I+   Y  K    EA  V          P ++   +L+++L +  RL   
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND--------------- 219
            +V   M       +++TY+ L+   C  G V+   ++L   + +               
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 220 ------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
                 GL P  YTY  ++DG CK+ R  +A  LL E    GV+ +  T++ L +G  K 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
                  GL+  M           Y   +  + K G +  A ++F  M+  G     +  
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            SL+ G C     EK++ +  Y++  +M K+  V  P TYG V++ +      D A   +
Sbjct: 386 ASLIEGYC----REKNVRQ-GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
              I  G  P  + +  +I+      +   A+ +L  M E    P    Y+ LI  L + 
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500

Query: 454 EKSYDACALYGAALKQGVIP 473
           ++  +A +     ++ G+ P
Sbjct: 501 KRMDEARSFLVEMVENGLKP 520



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 110/291 (37%), Gaps = 37/291 (12%)

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-------------------GVTPNVVT 262
           K D +++ A+    C  G   +A+ ++   IER                   G + + V 
Sbjct: 96  KLDSFSFLAL--DLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVL 153

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           F  LF+GY  +G   + V +         +P       LL+ LL+W ++     ++K MV
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEE--KDLL--------------EDAYQVFEKMTKKVS 366
                 D +  + L+   C     +  KD+L              + A ++ E M  K  
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           V    TY ++I  L K K+ ++A   L     +G      T++ +I  L      D A  
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
           L+  M  H        YD  I  + +      A AL+   +  G+IPQ + 
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 195/406 (48%), Gaps = 5/406 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  + F ++K+ G   ++   N LL   + LN  E A   ++E     +  + +TF+IMI
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    +A+  +  M  +G  PN+ T+  +V+  C SGR++ A  +L  M R   +
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TY  L+ G+C  GR+EEA ++   +   GL+P    Y  ++DGFC  G  + A   
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E +++G++P + T+N+L +    E    +   ++K ++++   PD I+Y+ L+NG  +
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
               + A  +  EM+  G +  ++   SLL  L      +K+ +++A  +F+K+T +  +
Sbjct: 409 CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVL-----SKKNRMKEADDLFKKITSEGVL 463

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D   +  +I           A   L     M   P  +TFN ++Q  C EGK+++A  L
Sbjct: 464 PDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAREL 523

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              M      P   S++ LI+   +     DA  +    L  G  P
Sbjct: 524 FDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 160/327 (48%), Gaps = 5/327 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   IF+ + + G   S   +N L+         + A  +  E    G++P   
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMS 362

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I     +    EA  +I  + + G  P+  T+ IL+N  C+    K+A  + D+M
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP  +TY  LL  L    R++EA ++   + ++G+ PDV  + A++DG C     
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNV 482

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A ELL +     V P+ VTFNT+  G+C+EG   +   L   MK+R   PD IS++TL
Sbjct: 483 KGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  + G I+ A  +  EM+  GF       N+L++GLC    +E DL E   ++ ++M
Sbjct: 543 ISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN--QEGDLAE---ELLKEM 597

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDE 388
             K    D  TY  +I  + K    DE
Sbjct: 598 VSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 174/386 (45%), Gaps = 5/386 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   LK+  D    ++  G   ++  +N ++         E A    +      + P+S+
Sbjct: 233 KEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSF 292

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I   C +    EA K+ + M   G  P+   +  L++  C  G L  A    D+M
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P + TYN L+  L    R +EA  M+  ++  G+ PD  TY  +++G+C+   +
Sbjct: 353 LKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANA 412

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  L +E +  G+ P   T+ +L +   K+    +   L K +     LPD I ++ L
Sbjct: 413 KKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNAL 472

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G      ++ A  + K+M R     DE   N++++G C +       +E+A ++F++M
Sbjct: 473 IDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK-----VEEARELFDEM 527

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            ++    D  ++  +I    +     +A    +  ++ G  P  +T+N ++Q LC   + 
Sbjct: 528 KRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEG 587

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI 447
           D A  LL  M      P  T+Y  LI
Sbjct: 588 DLAEELLKEMVSKGMTPDDTTYFTLI 613



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 139/294 (47%), Gaps = 6/294 (2%)

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           R+G K +I  ++ L+K  C + R +EA+E    +K  G+ P + T  +++  F K+ R+ 
Sbjct: 145 RLGFKSSI-VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTE 203

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
            A  L  E     +  +V TFN + N  CKEG   K    +  M+     P+ ++Y+T++
Sbjct: 204 AAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIV 263

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +G    G++  A +I   M R   E D     SL+ G+C     ++  LE+A ++FE+M 
Sbjct: 264 HGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMC-----KQGRLEEASKIFEEMV 318

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +K        Y  +I         D A  +    ++ G  P   T+N++I AL  E + D
Sbjct: 319 QKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD 378

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           +A  ++  + E    P   +Y++LI    +   +  A  L+   L  G+ P +K
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 188/393 (47%), Gaps = 14/393 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS-SYGLAPNS 120
           +A  + + + IF  I+    + SV   N L+     L   + A++ F E   ++ L P +
Sbjct: 50  QAGTMDQAMAIFRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEA 106

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL-D 179
            T++ +I+CYC  +   +AR++++    +    +V   T +    CK+ R+ EA ++L D
Sbjct: 107 TTYTAIIKCYCKMDRLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLD 164

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            + +   KP+I  +N ++ G C  GRV EAYEML  + + G  P+  TYT ++DGFCK G
Sbjct: 165 MVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSG 224

Query: 240 RSNEAMELLNEAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             +EA++L      R     PNVVTFN L +G CK         L+K MK R+   D  +
Sbjct: 225 NLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFT 284

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+TL++GL K G+      +F+EM+R G         +L+   C         L+DA QV
Sbjct: 285 YTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS-----LQDAQQV 339

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
              M  K    D  TY +++  L +  K   A       +     P  + ++ +++  C 
Sbjct: 340 IRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCK 399

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              +D+A+     M +    P   +  +L+  L
Sbjct: 400 AALVDEAVKYYVEMLDRRLAPDPATCKLLVEML 432



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 150/272 (55%), Gaps = 7/272 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+   ++++I  +C      EA ++++ +   G  PN  T+T L++  CKSG L EAL++
Sbjct: 173 PDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQL 232

Query: 178 LDQMGRIG--CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
              +       +PN+ T+N L+ GLC   R+E A+E++  +K   L+ D +TYT +MDG 
Sbjct: 233 FKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK GR++E   +  E +  G  P+VVT+ TL + +CK G+      +++ M  +   PD 
Sbjct: 293 CKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDV 352

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
            +Y+ LL GL + GK+R A   F++++R        + ++L+RG C  +     L+++A 
Sbjct: 353 TTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAA-----LVDEAV 407

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           + + +M  +    DP T  +++  L K  +TD
Sbjct: 408 KYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 183/393 (46%), Gaps = 45/393 (11%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN +TFS++I   C      EA +  + M +    PN+    +L+ SLC++G + +A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-KNDGLKPDVYTYTAV----- 231
                 I C P++ T N L+ G C +  +++A E+   + KN  L P+  TYTA+     
Sbjct: 61  FRG---IQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 232 -MD---------------------------GFCKVGRSNEAMELLNEAIER-GVTPNVVT 262
            MD                           GFCK  R +EA +LL + +E+    P++V 
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           +N + +G+CK G   +   +L+ +    C+P+ ++Y+TL++G  K G +  A+ +FK + 
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237

Query: 323 RFGFEVDERMM--NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
                 +  ++  N+L+ GLC     + D LE A+++ ++M  +    D  TY  ++  L
Sbjct: 238 SRDHHAEPNVVTFNALISGLC-----KADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K  +T E        +  G  P  +T+  ++ A C  G +  A  ++  M      P  
Sbjct: 293 CKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDV 352

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           T+Y +L+  L +  K   A   +   L++   P
Sbjct: 353 TTYTVLLEGLFENGKVRTATEFFEKILRERCPP 385



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 7/283 (2%)

Query: 68  ERID-----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           +R+D     + D ++K      +  +N ++           A +      S G  PN+ T
Sbjct: 153 QRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVT 212

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYH--PNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           ++ +I  +C   +  EA ++   +    +H  PNV TF  L++ LCK+ RL+ A E++ Q
Sbjct: 213 YTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQ 272

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M     + +  TY  L+ GLC  GR  E   +   +  +G  P V TYT ++   CK G 
Sbjct: 273 MKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS 332

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A +++   + +G+ P+V T+  L  G  + G         + + +  C P  + YS 
Sbjct: 333 LQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSA 392

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           L+ G  K   +  AV  + EM+      D      L+  LC +
Sbjct: 393 LVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 2/215 (0%)

Query: 62  KASPLKERIDIFD--SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           K+  L E + +F   S +      +V  FN L+  L   +  E A +   +  +  L  +
Sbjct: 222 KSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRAD 281

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           ++T++ ++   C +    E  +V + M   G +P+V T+T LV++ CK+G L++A +V+ 
Sbjct: 282 TFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIR 341

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M   G  P++ TY  LL+GL   G+V  A E    +  +   P    Y+A++ G CK  
Sbjct: 342 SMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAA 401

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
             +EA++   E ++R + P+  T   L    CK G
Sbjct: 402 LVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 86/181 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+   ++   +K          +  L+  L          + F E    G  P+  
Sbjct: 259 KADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVV 318

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  +C      +A++VI  M   G  P+VTT+T+L+  L ++G+++ A E  +++
Sbjct: 319 TYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKI 378

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R  C P    Y+ L++G C    V+EA +  + + +  L PD  T   +++  CK GR+
Sbjct: 379 LRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRT 438

Query: 242 N 242
           +
Sbjct: 439 D 439


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 211/457 (46%), Gaps = 69/457 (15%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ + +K +G    +  +N L+     + +  TA K   E S   L PN  T++ +I  
Sbjct: 37  VELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDA 96

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC      +A  + D M      P+V T+T ++N LCKSG+++EA  V  +M  +G  PN
Sbjct: 97  YCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPN 156

Query: 190 -----------------------------------IQTYNCLLKGLCYVGRVEEAYEMLM 214
                                              +  Y  L+ GL   G    A +M  
Sbjct: 157 RFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQ 216

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +  + L P+  TY+A++DG CK+G  N+   LL E  E+ + PNV+ ++++ +GY K+G
Sbjct: 217 VLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKG 276

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE----VDE 330
              + + +++ M +RN LP+   Y TL++G  K  +   A+ +FKEM   G E    V +
Sbjct: 277 LLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVID 336

Query: 331 RMMNSLLRGLCMKSWEE--KDLL------------------------EDAYQVFEKMTKK 364
             +N+L R   M+  +E  KD++                         DA+ + ++MT+K
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            S  D   Y ++I  L K  K +    H     ++G  P + TFN +I A C EG +  A
Sbjct: 397 SSGFDVVAYNVLINGLFKLGKYESESFHTGMR-QLGLAPDSATFNTMINAYCKEGNLGNA 455

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKSYD 458
           L LL  M  +   P+  + ++L+ +L    ++EK+ D
Sbjct: 456 LKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 145/292 (49%), Gaps = 5/292 (1%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + FN ++ A         A+K  +E  SYGL PNS T +I+++  C   +  +   +++ 
Sbjct: 437 ATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLND 496

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G+HP  TT   ++++  KS R    L   DQ+  +G K ++ TYN L+   C +G 
Sbjct: 497 MLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGM 556

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +  A  +  ++   G+  D+ TY A++ G+C      +A  + ++ +  GV+PNV T+N 
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNI 616

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L  G        +  GL+  MK+R  +P+  +Y  L++G  K G ++  V ++ EM+  G
Sbjct: 617 LLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKG 676

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F    R  N L+   C    ++   +  A ++ ++M  +    +  TY I+I
Sbjct: 677 FVPKTRTYNVLIS--CFAKGKK---MSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 170/349 (48%), Gaps = 17/349 (4%)

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
           +E+      M   G  P+  TF  ++N+ CK G L  AL++L++M   G KPN  T N L
Sbjct: 418 YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNIL 477

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           ++ LC  G +E+  ++L ++   G  P   T+ AV+D   K  R++  +   ++ +  GV
Sbjct: 478 VQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGV 537

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
             ++ T+NTL + +C+ G   +   + K M  +  L D I+Y+ L++G      ++ A +
Sbjct: 538 KLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFA 597

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           +  +M+  G   +    N LL GL         L+++A  +  +M ++  V +  TY I+
Sbjct: 598 VHSQMLTEGVSPNVETYNILLGGLSAAR-----LIKEAAGLVNQMKERGLVPNATTYDIL 652

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +   GK     E +      I  G +P+T T+N +I       K+ +A  L+  M     
Sbjct: 653 VSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGI 712

Query: 437 IPSRTSYDMLIT---KLDQ-------LEKSYDACA--LYGAALKQGVIP 473
            P+ ++YD+LI    KL +       L++SY A A  L+    ++G IP
Sbjct: 713 PPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 111/501 (22%), Positives = 187/501 (37%), Gaps = 109/501 (21%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G  + V  +  L+  L        A   F       L PN  T+S +I  +C   D  + 
Sbjct: 187 GIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKG 246

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             ++  M +    PNV  ++ +V+   K G L EA++V+ +M +    PN+  Y  L+ G
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306

Query: 200 -----------------------------------LCYVGRVEEAYEMLMNVKNDGLKPD 224
                                              L   GR+EEA E+  ++ + GL PD
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIER------------------------------ 254
              YT++MDGF K G+ ++A  +  E  E+                              
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTG 426

Query: 255 ----GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G+ P+  TFNT+ N YCKEG     + LL  MK     P+ I+ + L+  L   G+
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 311 IRPAVSIFKEMVRFGF-----------------------------------EVDERMMNS 335
           I   + +  +M+  GF                                   ++D    N+
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNT 546

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+   C        ++  A  VF+ M  K  + D  TY  +I          +A      
Sbjct: 547 LISTFC-----RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQ 601

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
            +  G  P   T+N ++  L     I +A  L+  M E   +P+ T+YD+L++   ++  
Sbjct: 602 MLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGN 661

Query: 456 SYDACALYGAALKQGVIPQRK 476
             +   LY   + +G +P+ +
Sbjct: 662 MKECVKLYCEMITKGFVPKTR 682



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 40/262 (15%)

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG---TPM 277
           ++  V  +  ++DG+C+ G  + A+ELL      G  P++VT+NTL NG+CK G   T  
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 278 KGVGLLKLMK----------------KRNCL----------------PDKISYSTLLNGL 305
           K +G + L+                 K  CL                PD ++Y+ ++NGL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GK+  A S+F+EM   G   +     +L+  L    ++E ++ E A+ +  +M  + 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSL----FKEGNVAE-AFVLQGRMVVRG 187

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D   Y  ++  L K    + A       +E   +P  +T++ +I   C  G ++K  
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
           LLL  M E    P+   Y  ++
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIV 269


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 182/371 (49%), Gaps = 20/371 (5%)

Query: 88  FNDLLMALVMLNEQETAVKFFS-EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           FN +L AL  + +     + ++       + P+  T+ I++   C      +A +V+D M
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198

Query: 147 F--DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ-MGRI-GCKPNIQTYNCLLKGLCY 202
              D    P+V T   +V+ LCKSGR++EAL  ++Q M  + GC PN  TYNCL+   C 
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP---- 258
           VG +  AYE++  ++N+G+  ++ T   ++ G C+ GR+  A+E   E  +R V P    
Sbjct: 259 VGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGKG 316

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           N VT++TL             + L          PD I Y T+++GL + G++  A S+ 
Sbjct: 317 NAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMA 376

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
             M   GF++D +  N L+ G C      K  L +AY++ ++M +     D  TY  ++ 
Sbjct: 377 SSMKEAGFKLDTKAYNILIAGFC-----RKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 379 TLGKGKKTDEALIH--LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
             G  K  D A +   L   I+ G  P  ITF  ++   C  GKID+AL +L  M E   
Sbjct: 432 --GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGI 489

Query: 437 IPSRTSYDMLI 447
            P+   Y+ LI
Sbjct: 490 HPNNVIYNTLI 500



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 166/321 (51%), Gaps = 11/321 (3%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP----NSWTFSIM 126
           ++ + ++ +G   ++   N ++  L        A++FF E  +  + P    N+ T+S +
Sbjct: 267 ELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT--VWPEGKGNAVTYSTL 324

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +    + N+   A ++       G+ P+   +  +++ L ++GRL++A  +   M   G 
Sbjct: 325 VGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGF 384

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           K + + YN L+ G C   R+ EAYE+L  +K  G++PDV TY  ++ G CK G      E
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDE 444

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           LL + I+ G  P+V+TF TL +GYCK G   + + +L+ M +    P+ + Y+TL++ L 
Sbjct: 445 LLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLC 504

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G +  A+ +F EM       +    N+LL+GL      +K++ E A+++ ++M ++  
Sbjct: 505 KRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL-----RDKNMPEKAFELMDQMREERC 559

Query: 367 VTDPGTYGIVIRTLGKGKKTD 387
             D  T  +++  L    +TD
Sbjct: 560 FPDYVTVDVLMEWLPVIGETD 580



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 158/329 (48%), Gaps = 15/329 (4%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGR--IGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           P+V T+ ILVN LCK+GR+ +AL VLD M R  +  +P++ T N ++ GLC  GRV+EA 
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229

Query: 211 EMLMNVKND--GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
             +    +   G  P+  TY  ++D FC+VG  + A EL+ +    GV  N+VT NT+  
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPD----KISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           G C+ G    G  L    +KR   P+     ++YSTL+  LL    +  A+ +F E +  
Sbjct: 290 GLCRAGR--TGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSE 347

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D  M  +++ GL      +   LEDA  +   M +     D   Y I+I    + K
Sbjct: 348 GHSPDAIMYFTMISGL-----TQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           +  EA   L    E+G  P   T+N ++   C  G       LL  M +    PS  ++ 
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFG 462

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            L+    ++ K  +A  +  +  + G+ P
Sbjct: 463 TLVHGYCKVGKIDEALRILRSMDESGIHP 491



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 119/241 (49%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++F     +G +     +  ++  L      E A    S     G   ++  ++I+I  
Sbjct: 338 MELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAG 397

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C K    EA +++  M + G  P+V T+  L++  CK+G      E+L +M   GC+P+
Sbjct: 398 FCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPS 457

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + T+  L+ G C VG+++EA  +L ++   G+ P+   Y  ++D  CK G  + A+EL +
Sbjct: 458 VITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFD 517

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E  E+ V  NV TFN L  G   +  P K   L+  M++  C PD ++   L+  L   G
Sbjct: 518 EMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIG 577

Query: 310 K 310
           +
Sbjct: 578 E 578



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 96/206 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L++   +  S+K+ G       +N L+           A +   E    G+ P+  
Sbjct: 365 QAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVC 424

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C   DF    +++  M D+G  P+V TF  LV+  CK G++ EAL +L  M
Sbjct: 425 TYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSM 484

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN   YN L+  LC  G V+ A E+   +K   +  +V T+ A++ G       
Sbjct: 485 DESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMP 544

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLF 267
            +A EL+++  E    P+ VT + L 
Sbjct: 545 EKAFELMDQMREERCFPDYVTVDVLM 570



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 1/200 (0%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++   +K+ G    V  +N LL       +     +   +    G  P+  TF  
Sbjct: 404 LHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGT 463

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  YC      EA +++  M ++G HPN   +  L++ LCK G +  A+E+ D+M    
Sbjct: 464 LVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKS 523

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              N+ T+N LLKGL      E+A+E++  ++ +   PD  T   +M+    +G ++   
Sbjct: 524 VPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLK 583

Query: 246 ELLNEAIERGVTPNVVTFNT 265
             + +  E   +  +V+  T
Sbjct: 584 RFMQQG-EHTASKRIVSDRT 602


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 197/414 (47%), Gaps = 9/414 (2%)

Query: 63  ASPLKERIDIFDSIKKDGTN---WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           A  ++E +D   +I++ G      S   +N  L +L+  +  E   K +S     GL P+
Sbjct: 119 AEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPD 178

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           + T++ MI  YC K     A +    + ++G   +  T   L+   C++  L++A  +L 
Sbjct: 179 TVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLM 238

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M  +GC+ N  +Y  L++GL     V EA  ++  +  DG   +++ YT ++ G CK G
Sbjct: 239 MMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEG 298

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R ++A  LL+E   RGV P+V T+N + +GYCK G     +G+  LM++  C PD  +Y+
Sbjct: 299 RIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYN 358

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           +L+ GL   GK+  A  +    +  GF        +L+ G C     + + ++DA +V  
Sbjct: 359 SLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYC-----KAERIDDALRVKS 412

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            M       D   YG++I  L K  +  EA   L+     G  P  + + ++I   C  G
Sbjct: 413 NMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVG 472

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +  AL +  LM      P+  +Y  LI  L Q +K + A AL     + G+ P
Sbjct: 473 MVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITP 526



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 199/414 (48%), Gaps = 13/414 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALV--MLNEQETAVKFFSEASSYGLAPN 119
           K+  +K+ + I   ++++G N     +N L+  L    L+E E   +  + A + G  P 
Sbjct: 331 KSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAE---ELLNGAIARGFTPT 387

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             TF+ +I  YC      +A +V   M  +    ++  + +L+N L K  RLKEA E L+
Sbjct: 388 VITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLN 447

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M   G  PN+  Y  ++ G C VG V  A E+   ++++G  P+ +TY +++ G  +  
Sbjct: 448 EMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDK 507

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           + ++AM L+ +  E G+TP V+ + TL  G CK+        L ++M+K    PD+ +Y+
Sbjct: 508 KLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYN 567

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L + L K G+   A S    +VR G  + +    SL+ G     + +    + A  + E
Sbjct: 568 VLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDG-----FSKAGNTDFAAVLIE 619

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           KM  +    D  TY ++++ L K KK +EAL  L      G     + +  +I  +  EG
Sbjct: 620 KMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEG 679

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           K D A  L   M      PS T+Y + I+   ++ +  +A  L G   + GV P
Sbjct: 680 KHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTP 733



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 177/400 (44%), Gaps = 8/400 (2%)

Query: 48  NPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           NP        +  +    L E  ++ +     G   +V  F +L+         + A++ 
Sbjct: 351 NPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRV 410

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            S   S     +   + ++I     K    EA++ ++ MF NG  PNV  +T +++  CK
Sbjct: 411 KSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCK 470

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G +  ALEV   M   GC PN  TY  L+ GL    ++ +A  ++  ++ DG+ P V  
Sbjct: 471 VGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIA 530

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           YT ++ G CK    + A  L     + G+TP+   +N L +  CK G   +    L    
Sbjct: 531 YTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---V 587

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           ++  +  K++Y++L++G  K G    A  + ++MV  G + D    + LL+ LC     +
Sbjct: 588 RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALC-----K 642

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           +  L +A  + ++MT      +   Y I+I  + K  K D A    +  I  GH P   T
Sbjct: 643 QKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATT 702

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +   I + C  G+I++A  L+  M      P   +Y + I
Sbjct: 703 YTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFI 742



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 179/435 (41%), Gaps = 50/435 (11%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++F  ++ +G + +   +  L+  L+   +   A+   ++    G+ P    ++ +I+ 
Sbjct: 478 LEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQG 537

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI----- 184
            C K++F  A ++ + M  NG  P+   + +L ++LCKSGR +EA   L + G +     
Sbjct: 538 QCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVT 597

Query: 185 ---------------------------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
                                      GCK ++ TY+ LL+ LC   ++ EA  +L  + 
Sbjct: 598 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMT 657

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G+K ++  YT ++    K G+ + A  L NE I  G  P+  T+    + YCK G   
Sbjct: 658 VSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIE 717

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           +   L+  M++    PD ++Y   +NG    G +  A S  K MV    E +      LL
Sbjct: 718 EAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLL 777

Query: 338 RGLC--------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
           +                 M +W E   L   +Q+ E+M K        TY  +I    K 
Sbjct: 778 KHFLKMSLINAHYIDTSGMWNWIE---LNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKA 834

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            + +EA + L H +     P    +  +I+  C      K +  +  M E    P   SY
Sbjct: 835 TRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESY 894

Query: 444 DMLITKLDQLEKSYD 458
             LI  L   E  YD
Sbjct: 895 HYLIVGLCD-EGDYD 908



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 177/396 (44%), Gaps = 28/396 (7%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ ++K+G       +N L  AL      E A  F       G+     T++ ++  + 
Sbjct: 550 LFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRK---GVVLTKVTYTSLVDGFS 606

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +   A  +I+ M + G   ++ T+++L+ +LCK  +L EAL +LDQM   G K NI 
Sbjct: 607 KAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIV 666

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            Y  ++  +   G+ + A  +   + + G KP   TYT  +  +CK+G+  EA  L+ E 
Sbjct: 667 AYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEM 726

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL--------- 302
              GVTP+VVT++   NG    G   +    LK M   +C P+  +Y  LL         
Sbjct: 727 ERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLI 786

Query: 303 -------NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
                  +G+  W ++     + + M++ G        +S++ G C     +   LE+A 
Sbjct: 787 NAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFC-----KATRLEEAC 841

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            + + M  K    +   Y ++I+     K   + +  +   IE G  P+  +++ +I  L
Sbjct: 842 VLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGL 901

Query: 416 CGEGKIDKA----LLLLFLMYEHAKIPSRTSYDMLI 447
           C EG  D+A      LL + Y H ++  +   D L+
Sbjct: 902 CDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLL 937



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 16/295 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E + I D +   G   ++  +  ++  ++   + + A   F+E  S G  P++ 
Sbjct: 642 KQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSAT 701

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+++ I  YC      EA  +I  M  +G  P+V T+ I +N     G +  A   L +M
Sbjct: 702 TYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRM 761

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAY----------------EMLMNVKNDGLKPDV 225
               C+PN  TY  LLK    +  +   Y                ++L  +   GL P V
Sbjct: 762 VDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTV 821

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            TY++++ GFCK  R  EA  LL+  + + ++PN   +  L    C      K V  +  
Sbjct: 822 VTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTD 881

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           M +    P   SY  L+ GL   G    A S+F +++   +  +E     L  GL
Sbjct: 882 MIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGL 936



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 16/260 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E   +   +++DG    V  ++  +     +   + A             PN W
Sbjct: 712 KIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCW 771

Query: 122 TFSIMIRCYC----------------NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           T+ ++++ +                 N  +     ++++ M  +G +P V T++ ++   
Sbjct: 772 TYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGF 831

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK+ RL+EA  +LD M      PN + Y  L+K  C +    +    + ++   G +P +
Sbjct: 832 CKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQL 891

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            +Y  ++ G C  G  + A  L  + +      N V +  L +G  K G       LL  
Sbjct: 892 ESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAA 951

Query: 286 MKKRNCLPDKISYSTLLNGL 305
           M  R+C  D  SYS L + +
Sbjct: 952 MDNRHCRIDSESYSMLTDSI 971



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 43/93 (46%)

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C  + E+     DA Q   ++  K  V  P  Y + +R+L +   T+       H ++ G
Sbjct: 115 CSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEG 174

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
            +P T+T+N +I A C +G +  A     L+ E
Sbjct: 175 LLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRE 207


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 187/382 (48%), Gaps = 5/382 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + I  F   +K   +  +    +LL  ++ LN   T   F+ E    G   N + F+I
Sbjct: 186 IPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNI 245

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  +C + +  +A+KV D +      P V +F  L+N  CK G L E   +  QM +  
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +P++ TY+ L+  LC   +++ A+ +   +   GL P+   +T ++ G  + G  +   
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E   + + +G+ P++V +NTL NG+CK G  +    ++  M +R   PDKI+Y+TL++G 
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G +  A+ I KEM + G E+D    ++L+ G+C     ++  + DA +   +M +  
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC-----KEGRVIDAERALREMLRAG 480

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY +++    K          L      GH+P  +T+N ++  LC  G++  A 
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
           +LL  M     +P   +Y+ L+
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLL 562



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 138/278 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   +   ++K  T   V  ++ L+ AL   N+ + A   F E    GL PN  
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  +    +    ++    M   G  P++  +  LVN  CK+G L  A  ++D M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G +P+  TY  L+ G C  G VE A E+   +  +G++ D   ++A++ G CK GR 
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A   L E +  G+ P+ VT+  + + +CK+G    G  LLK M+    +P  ++Y+ L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           LNGL K G+++ A  +   M+  G   D+   N+LL G
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 183/402 (45%), Gaps = 9/402 (2%)

Query: 57  FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
            +DR+ K +P       +  I   G   +V  FN L+           A K F E +   
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           L P   +F+ +I  YC   +  E  ++   M  +   P+V T++ L+N+LCK  ++  A 
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            + D+M + G  PN   +  L+ G    G ++   E    + + GL+PD+  Y  +++GF
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK G    A  +++  I RG+ P+ +T+ TL +G+C+ G     + + K M +     D+
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           + +S L+ G+ K G++  A    +EM+R G + D+     ++   C K   +       +
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQT-----GF 505

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++ ++M     V    TY +++  L K  +   A + L   + +G +P  IT+N +++  
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
                  K  +      E   +    SY  ++ +LD+  K +
Sbjct: 566 HRHANSSKRYI---QKPEIGIVADLASYKSIVNELDRASKDH 604


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 173/348 (49%), Gaps = 5/348 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L    ++++ +   G    V  ++ L+  L  L    +AV+   E    G APN  T+S 
Sbjct: 329 LARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYST 388

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  +C    + +AR ++D M   G+  N   +  ++ +LCK G+L +A  ++ +M   G
Sbjct: 389 LLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQG 448

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CKP+I TYN ++  LC    +EEA  +  N+  +G+  +  TY  ++    + GR  E +
Sbjct: 449 CKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGL 508

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L +E +  G   +V+++N L    CKEG   + + LL+ M  +   P+  SY+ L+N L
Sbjct: 509 RLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINEL 568

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GK+R A+ + KEM+  G   D    N+L+ GLC   W        A  + EK+  + 
Sbjct: 569 CKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHA-----ALNLLEKLPNEN 623

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
              D  TY I+I    K +  D+A + L  AI  G +P   T+  ++Q
Sbjct: 624 VHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQ 671



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 201/451 (44%), Gaps = 61/451 (13%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S   +N +L  L   +    A+  +       + P ++TF +  R  C      +A  ++
Sbjct: 141 SFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALL 200

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M  +G  P+   +  ++++L   G + EA  +LD+M  +GC  ++ T+N L+ GLC +
Sbjct: 201 RGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGL 260

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE---------- 253
           GRV EA  ++  +   G  P V TY  ++ G C+  +++EA  +L    E          
Sbjct: 261 GRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVI 320

Query: 254 ---------------------RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                                +G  P+V T++ L +G CK G     V +L  M+++ C 
Sbjct: 321 RGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCA 380

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC----------- 341
           P+ ++YSTLL+   + G    A ++  +M+  GF ++ +  N ++  LC           
Sbjct: 381 PNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRL 440

Query: 342 ---MKSWEEK----------------DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
              MKS   K                DL+E+A  +F  + ++  V +  TY  +I  L +
Sbjct: 441 VQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLR 500

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
             +  E L      +  G     I++N +I+ALC EG +D+++ LL  M      P+  S
Sbjct: 501 NGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFS 560

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           Y+MLI +L +  K  DA  L    L QG+ P
Sbjct: 561 YNMLINELCKAGKVRDALELSKEMLNQGLTP 591



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 193/436 (44%), Gaps = 36/436 (8%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D +   G    V+ FNDL++ L  L     A +      + G  P+  T+  +++  C
Sbjct: 234 LLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLC 293

Query: 132 -------------------------------NKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
                                           +     A ++ + M   G  P+V T++I
Sbjct: 294 RTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSI 353

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L++ LCK GR   A+ +LD+M   GC PNI TY+ LL   C  G  ++A  ML  +   G
Sbjct: 354 LMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKG 413

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
              +   Y  ++   CK G+ ++A  L+ E   +G  P++ T+NT+    C      +  
Sbjct: 414 FSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAE 473

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            + + + +   + + I+Y+TL++ LL+ G+ +  + +  EM+  G ++D    N L++ L
Sbjct: 474 HIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKAL 533

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C +   ++ +      + E+M  K    +  +Y ++I  L K  K  +AL      +  G
Sbjct: 534 CKEGNVDRSM-----ALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 588

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
             P  +T+N +I  LC  G    AL LL  +      P   +Y++LI+   ++    DA 
Sbjct: 589 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAA 648

Query: 461 ALYGAALKQGVIPQRK 476
            L   A+  G++P  +
Sbjct: 649 MLLDKAISGGIVPNER 664



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 117/214 (54%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   IF ++ ++G   +   +N L+ AL+     +  ++  SE   +G   +  +++ 
Sbjct: 469 MEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNG 528

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+  C + +   +  +++ M   G  PN  ++ +L+N LCK+G++++ALE+  +M   G
Sbjct: 529 LIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 588

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+I TYN L+ GLC VG    A  +L  + N+ + PD+ TY  ++   CKV   ++A 
Sbjct: 589 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAA 648

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            LL++AI  G+ PN  T+  +   + ++   ++G
Sbjct: 649 MLLDKAISGGIVPNERTWGMMVQNFVRQTVNLEG 682



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 106/211 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L +   +   +K  G    +  +N ++  L   +  E A   F      G+  N  
Sbjct: 430 KDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGI 489

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I        + E  ++   M  +G   +V ++  L+ +LCK G +  ++ +L++M
Sbjct: 490 TYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEM 549

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KPN  +YN L+  LC  G+V +A E+   + N GL PD+ TY  +++G CKVG +
Sbjct: 550 VTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 609

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           + A+ LL +     V P++VT+N L + +CK
Sbjct: 610 HAALNLLEKLPNENVHPDIVTYNILISWHCK 640



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 20/195 (10%)

Query: 278 KGVGLLKLMKKRNCL-PDKISYSTLLNGLLKWGKIRPAVSIFKEMVR-------FGFEVD 329
           + + LL  M +R  + P   SY+ +L+ L +      A+ +++ M+R       F F V 
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
            R +  L R              DA  +   M +   V D   Y  VI  L       EA
Sbjct: 184 ARALCRLGRA------------GDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEA 231

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
            + L   + MG      TFN+++  LCG G++ +A  L+  M     +PS  +Y  L+  
Sbjct: 232 AMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQG 291

Query: 450 LDQLEKSYDACALYG 464
           L +  ++ +ACA+ G
Sbjct: 292 LCRTRQADEACAMLG 306


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 205/447 (45%), Gaps = 34/447 (7%)

Query: 61  IKASPLKERI----DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           IKA   +E I    D  + I   G  +S+   N LL+ L      E A   + +  + G+
Sbjct: 135 IKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGI 194

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P+  TF+ +I     K    EA  ++  +F     P+V T+T L+   C++  L  A  
Sbjct: 195 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 254

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           V D+M + GC PN  TY+ L+ GLC  GRV+EA +ML  +   G++P VYTYT  +   C
Sbjct: 255 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
            +    EA+EL+    +RG  PNV T+  L +G  + G     +GL   M K   +P+ +
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL----- 351
           +Y+ L+N L   G+   A+ IF  M   G   + +  N +++GLC+    EK ++     
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 352 -------------------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
                                     +A ++ + M +     D  TY  ++    K  K 
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           + A  +    +E G  P  +++  +I     +GK+D AL LL  M E    P+  SY+ +
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I  L +  +  +A  +    ++QG++P
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLP 581



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 187/389 (48%), Gaps = 7/389 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + K+G + +   ++ L+  L      + A+    E    G+ P  +T+++ I   C
Sbjct: 255 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA +++  M   G  PNV T+T L++ L + G+L+ A+ +  +M + G  PN  
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+  LC  GR   A ++   ++  G   +  TY  ++ G C  G   +AM L  + 
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           ++ G  P VVT+NTL NGY  +G       LL LMK+  C PD+ +Y+ L++G  KWGK+
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED-AYQVFEKMTKKVSVTDP 370
             A   F+EMV  G   +     +L+ G        KD   D A  + ++M +     + 
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDG------HSKDGKVDIALSLLKRMEEMGCNPNV 548

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            +Y  VI  L K  +  EA       +E G +P  IT+  +I  LC  G+   A  +   
Sbjct: 549 ESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD 608

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           M +   +P+  +Y  LI  L Q  K+ +A
Sbjct: 609 MEKRKCLPNLYTYSSLIYGLCQEGKADEA 637



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 202/406 (49%), Gaps = 8/406 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET--AVKFFSEASSYGLAPNSWTFSIMI 127
           I + + + +D   ++ +D   +LM     NE+E      F +E S  G   + ++ + ++
Sbjct: 112 ISMLNRLVRDRV-FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLL 170

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                      AR +   M ++G  P++ TF  L+N L K G+++EA  +L Q+ +    
Sbjct: 171 IQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLS 230

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++ TY  L+ G C    ++ A+ +   +  +G  P+  TY+ +++G C  GR +EA+++
Sbjct: 231 PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDM 290

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L E IE+G+ P V T+       C      + + L+  MKKR C P+  +Y+ L++GL +
Sbjct: 291 LEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR 350

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK+  A+ ++ +M++ G   +    N+L+  LC+           A ++F  M    S+
Sbjct: 351 LGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR-----FSTALKIFHWMEGHGSL 405

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            +  TY  +I+ L  G   ++A++     ++MG +P  +T+N +I     +G ++ A  L
Sbjct: 406 ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARL 465

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L LM E+   P   +Y+ L++   +  K   A   +   ++ G+ P
Sbjct: 466 LDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP 511



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 185/380 (48%), Gaps = 10/380 (2%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +KK G   +V  +  L+  L  L + E A+  + +    GL PN+ T++ +I   C    
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           F  A K+   M  +G   N  T+  ++  LC  G +++A+ + ++M ++G  P + TYN 
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G    G V  A  +L  +K +G +PD +TY  ++ GF K G+   A     E +E G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           + PN V++  L +G+ K+G     + LLK M++  C P+  SY+ ++NGL K  +   A 
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            I  +MV  G   +     +L+ GLC          + A+++F  M K+  + +  TY  
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLC-----RNGRTQFAFKIFHDMEKRKCLPNLYTYSS 623

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I  L +  K DEA        E+G  P   T++ ++  LC +G+  +A  L+  M E  
Sbjct: 624 LIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG 679

Query: 436 KIPSR-TSYDMLITKLDQLE 454
             P R   Y +LI     LE
Sbjct: 680 FCPDREIYYSLLIAHCKNLE 699



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 196/438 (44%), Gaps = 40/438 (9%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +++  +   G   S+  FN L+  L    +   A    S+   Y L+P+ +T++ +I  +
Sbjct: 184 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 243

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM--------- 181
           C   +   A  V D M   G  PN  T++ L+N LC  GR+ EAL++L++M         
Sbjct: 244 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTV 303

Query: 182 --------------------------GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
                                      + GC+PN+QTY  L+ GL  +G++E A  +   
Sbjct: 304 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHK 363

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +  +GL P+  TY A+++  C  GR + A+++ +     G   N  T+N +  G C  G 
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 423

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             K + L + M K   LP  ++Y+TL+NG L  G +  A  +   M   G E DE   N 
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+ G     W +   LE A   F++M +     +P +Y  +I    K  K D AL  L  
Sbjct: 484 LVSGF--SKWGK---LESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKR 538

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
             EMG  P   ++N VI  L  E +  +A  +   M E   +P+  +Y  LI  L +  +
Sbjct: 539 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR 598

Query: 456 SYDACALYGAALKQGVIP 473
           +  A  ++    K+  +P
Sbjct: 599 TQFAFKIFHDMEKRKCLP 616



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 188/388 (48%), Gaps = 9/388 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ + K G   +V  +N L+   +       A +        G  P+ WT++ ++  + 
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 489

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A      M + G +PN  ++T L++   K G++  AL +L +M  +GC PN++
Sbjct: 490 KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVE 549

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           +YN ++ GL    R  EA ++   +   GL P+V TYT ++DG C+ GR+  A ++ ++ 
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 609

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            +R   PN+ T+++L  G C+EG   +     + M +  C P   +YSTL++GL + G+ 
Sbjct: 610 EKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRF 665

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  + K+M   GF  D  +  SLL   C K+ E    ++ A ++F  +  K       
Sbjct: 666 YEAEQLVKDMKERGFCPDREIYYSLLIAHC-KNLE----VDHALKIFHSIEAKGFQLHLS 720

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            Y  +I  L K  + +EA     + +E       I +  ++  L  EG++D  + LL +M
Sbjct: 721 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 780

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDA 459
                 P+  +Y +L  +L ++ KS ++
Sbjct: 781 ESKNFTPNIQTYVILGRELSRIGKSIES 808



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 135/290 (46%), Gaps = 5/290 (1%)

Query: 23  IPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGT 81
           +  F+K     +AS    E ++   NP  +     +D   K   +   + +   +++ G 
Sbjct: 485 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGC 544

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           N +V  +N ++  L   N    A K   +    GL PN  T++ +I   C       A K
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           +   M      PN+ T++ L+  LC+ G+  EA    ++M  IGC+P + TY+ L+ GLC
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLC 660

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             GR  EA +++ ++K  G  PD   Y +++   CK    + A+++ +    +G   ++ 
Sbjct: 661 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 720

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            +  L    CK G   +   L   M ++    D+I ++ L++GLLK G++
Sbjct: 721 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGEL 770



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 4/249 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K +   E   I D + + G   +V  +  L+  L      + A K F +       PN +
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I   C +    EA +    M + G  P + T++ LV+ LC+ GR  EA +++  M
Sbjct: 620 TYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 675

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+ + Y  LL   C    V+ A ++  +++  G +  +  Y A++   CK G+ 
Sbjct: 676 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 735

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L +  +E+    + + +  L +G  KEG     + LL +M+ +N  P+  +Y  L
Sbjct: 736 EEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795

Query: 302 LNGLLKWGK 310
              L + GK
Sbjct: 796 GRELSRIGK 804



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 7/222 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF  ++K     ++  ++ L+  L     QE         S  G  P   T+S ++   C
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLC----QEGKADEAERMSEIGCEPTLDTYSTLVSGLC 660

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            K  F+EA +++  M + G+ P+   +  L+ + CK+  +  AL++   +   G + ++ 
Sbjct: 661 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 720

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            Y  L+  LC  G+VEEA  +  N+       D   +T ++DG  K G  +  M+LL+  
Sbjct: 721 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 780

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGL---LKLMKKRN 290
             +  TPN+ T+  L     + G  ++   L   LK++K  N
Sbjct: 781 ESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLKDSN 822


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 188/393 (47%), Gaps = 14/393 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS-SYGLAPNS 120
           +A  + + + IF  I+    + SV   N L+     L   + A++ F E   ++ L P +
Sbjct: 50  QAGKMDQAMAIFRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEA 106

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL-D 179
            T++ +I+CYC  +   +AR++++    +    +V   T +    CK+ R+ EA ++L D
Sbjct: 107 TTYTAIIKCYCKMDRLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLD 164

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            + +   KP+I  +N ++ G C  GRV EAYEML  + + G  P+  TYT ++DGFCK G
Sbjct: 165 MVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSG 224

Query: 240 RSNEAMELLNEAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             +EA++L      R     PNVVTFN L +G CK         L+K MK R+   D  +
Sbjct: 225 NLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFT 284

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+TL++GL K G+      +F+EM+R G         +L+   C         L+DA QV
Sbjct: 285 YTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS-----LQDAQQV 339

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
              M  K    D  TY +++  L +  K   A       +     P  + ++ +++  C 
Sbjct: 340 IRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCK 399

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              +D+A+     M +    P   +  +L+  L
Sbjct: 400 AALVDEAVKYYVEMLDRRLAPDPATCKLLVEML 432



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 150/272 (55%), Gaps = 7/272 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+   ++++I  +C      EA ++++ +   G  PN  T+T L++  CKSG L EAL++
Sbjct: 173 PDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQL 232

Query: 178 LDQMGRIG--CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
              +       +PN+ T+N L+ GLC   R+E A+E++  +K   L+ D +TYT +MDG 
Sbjct: 233 FKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK GR++E   +  E +  G  P+VVT+ TL + +CK G+      +++ M  +   PD 
Sbjct: 293 CKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDV 352

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
            +Y+ LL GL + GK+R A   F++++R        + ++L+RG C  +     L+++A 
Sbjct: 353 TTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAA-----LVDEAV 407

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           + + +M  +    DP T  +++  L K  +TD
Sbjct: 408 KYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 184/393 (46%), Gaps = 45/393 (11%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN +TFS++I   C      EA +  + M +    PN+    +L+ SLC++G++ +A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-KNDGLKPDVYTYTAV----- 231
                 I C P++ T N L+ G C +  +++A E+   + KN  L P+  TYTA+     
Sbjct: 61  FRG---IQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 232 -MD---------------------------GFCKVGRSNEAMELLNEAIER-GVTPNVVT 262
            MD                           GFCK  R +EA +LL + +E+    P++V 
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           +N + +G+CK G   +   +L+ +    C+P+ ++Y+TL++G  K G +  A+ +FK + 
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237

Query: 323 RFGFEVDERMM--NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
                 +  ++  N+L+ GLC     + D LE A+++ ++M  +    D  TY  ++  L
Sbjct: 238 SRDHHAEPNVVTFNALISGLC-----KADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K  +T E        +  G  P  +T+  ++ A C  G +  A  ++  M      P  
Sbjct: 293 CKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDV 352

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           T+Y +L+  L +  K   A   +   L++   P
Sbjct: 353 TTYTVLLEGLFENGKVRTATEFFEKILRERCPP 385



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 7/283 (2%)

Query: 68  ERID-----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           +R+D     + D ++K      +  +N ++           A +      S G  PN+ T
Sbjct: 153 QRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVT 212

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYH--PNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           ++ +I  +C   +  EA ++   +    +H  PNV TF  L++ LCK+ RL+ A E++ Q
Sbjct: 213 YTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQ 272

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M     + +  TY  L+ GLC  GR  E   +   +  +G  P V TYT ++   CK G 
Sbjct: 273 MKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS 332

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A +++   + +G+ P+V T+  L  G  + G         + + +  C P  + YS 
Sbjct: 333 LQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSA 392

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           L+ G  K   +  AV  + EM+      D      L+  LC +
Sbjct: 393 LVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 2/215 (0%)

Query: 62  KASPLKERIDIFD--SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           K+  L E + +F   S +      +V  FN L+  L   +  E A +   +  +  L  +
Sbjct: 222 KSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRAD 281

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           ++T++ ++   C +    E  +V + M   G +P+V T+T LV++ CK+G L++A +V+ 
Sbjct: 282 TFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIR 341

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            M   G  P++ TY  LL+GL   G+V  A E    +  +   P    Y+A++ G CK  
Sbjct: 342 SMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAA 401

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
             +EA++   E ++R + P+  T   L    CK G
Sbjct: 402 LVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 86/181 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+   ++   +K          +  L+  L          + F E    G  P+  
Sbjct: 259 KADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVV 318

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  +C      +A++VI  M   G  P+VTT+T+L+  L ++G+++ A E  +++
Sbjct: 319 TYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKI 378

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R  C P    Y+ L++G C    V+EA +  + + +  L PD  T   +++  CK GR+
Sbjct: 379 LRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRT 438

Query: 242 N 242
           +
Sbjct: 439 D 439


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 205/467 (43%), Gaps = 65/467 (13%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ +++     +   +N ++  L      E A  F  E   YGL+P+++T+  ++   C
Sbjct: 267 VFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLC 326

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA+ ++D M  +G  PNV  +  LV+   K G+  EA ++L++M   G +PN  
Sbjct: 327 KGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKI 386

Query: 192 TYNCLLKGLCYVGRV-----------------------------------EEAYEMLMNV 216
            Y+ L++GLC +G++                                   + A+E+L  +
Sbjct: 387 MYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEM 446

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           +N G+ P+ YTY  +++G C+ G S EA  LL E I  G+ PN   +  L  G+ KEG  
Sbjct: 447 RNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHI 506

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                 L+ M K N LPD   Y++L+ GL   G+I  A   + ++ + G   DE   + L
Sbjct: 507 SLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGL 566

Query: 337 LRGLCMKSWEEK---------------------DLLEDAYQ---------VFEKMTKKVS 366
           + G C     EK                     DLLE  ++         + + M     
Sbjct: 567 IHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD 626

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D   YGIVIR L + +  + A + L    + G +P    ++++I  LC    ++KA+ 
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LL  M +    P    Y+ LI    +      A  ++ + L +G++P
Sbjct: 687 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLP 733



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 174/389 (44%), Gaps = 30/389 (7%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N LL  L+  +  E   K        G+ P+ +T+S  +  +C   DF  A+KV + M  
Sbjct: 214 NGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRR 273

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
                N  T+ ++++ LC+SG ++EA    ++M   G  P+  TY  L+ GLC  GR++E
Sbjct: 274 RDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKE 333

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +L  +   GLKP+V  Y  ++DGF K G++ EA ++LNE I  GV PN + ++ L  
Sbjct: 334 AKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIR 393

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G CK G   +   LL  M K    PD  +Y  L+ G  +      A  +  EM   G   
Sbjct: 394 GLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILP 453

Query: 329 DERMMNSLLRGLCM--KSWEEKDLLED----------------------------AYQVF 358
           +      ++ GLC   +S E  +LLE+                            A +  
Sbjct: 454 NAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESL 513

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           E MTK   + D   Y  +I+ L    + +EA  +     + G +P   T++ +I   C  
Sbjct: 514 ENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKT 573

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             ++KA  LL  M      P+  +Y  L+
Sbjct: 574 RNLEKADQLLQQMLNSGLKPNADTYTDLL 602



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 191/413 (46%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K     E  DI + +   G   +   +++L+  L  + +   A K  +E    G  P++
Sbjct: 361 MKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDT 420

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T+  +++ +    D   A ++++ M ++G  PN  T+ I++N LC++G  KEA  +L++
Sbjct: 421 FTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEE 480

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G KPN   Y  L+ G    G +  A E L N+    + PD++ Y +++ G   VGR
Sbjct: 481 MISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGR 540

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA E   +  +RG+ P+  T++ L +GYCK     K   LL+ M      P+  +Y+ 
Sbjct: 541 IEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTD 600

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LL G  K        SI + M+  G + D       + G+ +++    + +E A+ V  +
Sbjct: 601 LLEGYFKSNDHEKVSSILQSMLGSGDKPDNH-----IYGIVIRNLSRSENMEVAFMVLTE 655

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           + K   V D   Y  +I  L K    ++A+  L    + G  P  + +N +I   C  G 
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 715

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           I +A  +   +     +P+  +Y  LI    +     DA  LY   L +G+ P
Sbjct: 716 ISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAP 768



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 169/337 (50%), Gaps = 6/337 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L  +   E A +++++    GL P+ +T+S +I  YC   +  +A +++  M 
Sbjct: 528 YNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQML 587

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           ++G  PN  T+T L+    KS   ++   +L  M   G KP+   Y  +++ L     +E
Sbjct: 588 NSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENME 647

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A+ +L  V+ +GL PD++ Y++++ G CK+    +A+ LL+E  + G+ P +V +N L 
Sbjct: 648 VAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALI 707

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G+C+ G   +   +   +  +  LP+ ++Y+ L++G  K G I  A  ++K+M+  G  
Sbjct: 708 DGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIA 767

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D  + N L  G C  + + +  L    ++F +    VS+     +  ++R   K  +  
Sbjct: 768 PDAFVYNVLATG-CSDAADLEQALFLTEEMFNRGYAHVSL-----FSTLVRGFCKRGRLQ 821

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           E    LH  ++   +P   T  NVI      GK+ +A
Sbjct: 822 ETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEA 858



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 161/351 (45%), Gaps = 9/351 (2%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           +++ A +  +E  + G+ PN++T+ IMI   C   +  EA  +++ M   G  PN   + 
Sbjct: 435 DKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYA 494

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L+    K G +  A E L+ M +    P++  YN L+KGL  VGR+EEA E    V+  
Sbjct: 495 PLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKR 554

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           GL PD +TY+ ++ G+CK     +A +LL + +  G+ PN  T+  L  GY K     K 
Sbjct: 555 GLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKV 614

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             +L+ M      PD   Y  ++  L +   +  A  +  E+ + G   D  + +SL+ G
Sbjct: 615 SSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISG 674

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAI 397
           LC  +  EK     A  + ++M K+    +PG   Y  +I    +      A       +
Sbjct: 675 LCKMADMEK-----AVGLLDEMAKE--GLEPGIVCYNALIDGFCRSGDISRARNVFDSIL 727

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
             G +P  +T+  +I   C  G I  A  L   M +    P    Y++L T
Sbjct: 728 AKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLAT 778



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 157/384 (40%), Gaps = 65/384 (16%)

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
                +LV++  K+G ++ A +V+  MG +G  P  +  N LLK L     +E  +++  
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234

Query: 215 NVKNDGLKPDVYTYTAVMD-----------------------------------GFCKVG 239
            ++  G+ PDVYTY+  ++                                   G C+ G
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
              EA     E ++ G++P+  T+  L NG CK G   +   LL  M      P+ + Y+
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC---------------MKS 344
           TL++G +K GK   A  I  EM+  G + ++ M ++L+RGLC               +K 
Sbjct: 355 TLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKV 414

Query: 345 WEEKDLL---------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               D                 + A+++  +M     + +  TYGI+I  L +  ++ EA
Sbjct: 415 GHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEA 474

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
              L   I  G  P    +  +I     EG I  A   L  M +   +P    Y+ LI  
Sbjct: 475 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKG 534

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
           L  + +  +A   Y    K+G++P
Sbjct: 535 LSTVGRIEEAEEYYAQVQKRGLVP 558



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 127/294 (43%), Gaps = 34/294 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L++   +   +   G   +   + DLL      N+ E            G  P++ 
Sbjct: 572 KTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNH 631

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            + I+IR      +   A  V+  +  NG  P++  ++ L++ LCK   +++A+ +LD+M
Sbjct: 632 IYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEM 691

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G +P I  YN L+ G C  G +  A  +  ++   GL P+  TYTA++DG CK G  
Sbjct: 692 AKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDI 751

Query: 242 NEAMELLNEAIERGVTPN----------------------------------VVTFNTLF 267
            +A +L  + ++RG+ P+                                  V  F+TL 
Sbjct: 752 TDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLV 811

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            G+CK G   +   LL +M  R  +P+  +   ++    K GK+  A  +F E+
Sbjct: 812 RGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAEL 865



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/216 (20%), Positives = 86/216 (39%), Gaps = 5/216 (2%)

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
               + L + Y K G+      ++ +M      P +   + LL  LL+   +     +  
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            M   G   D    ++ L   C    + +D  + A +VFE+M ++    +  TY ++I  
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHC----KARDF-DAAKKVFEEMRRRDCAMNEVTYNVMISG 289

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           L +    +EA       ++ G  P   T+  ++  LC  G++ +A  LL  M      P+
Sbjct: 290 LCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPN 349

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
              Y  L+    +  K+ +A  +    +  GV P +
Sbjct: 350 VVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNK 385


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 196/401 (48%), Gaps = 10/401 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD ++ DG     S    L+ +   + + ++A  F +E   YG+  + + ++ ++    
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLV 190

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +N   EA  +     +  + P+V +F IL+  LC+ G + +A E    MG  GC P+I 
Sbjct: 191 KQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIV 250

Query: 192 TYNCLLKGLCYVGRVEEAYEML---MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           +YN L+ G C V  + + +++L   M +K  G+ PDV TYT+++ G+CK+G    A EL 
Sbjct: 251 SYNTLINGFCRVNEISKGHDLLKEDMLIK--GVSPDVITYTSIISGYCKLGDMKAASELF 308

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +E +  G+ PN  TFN L +G+ K G     + + + M    CLPD +++++L++G  + 
Sbjct: 309 DEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCRE 368

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G++   + +++EM       +      L+  LC     +++ + +A      +     V 
Sbjct: 369 GEVNQGLKLWEEMKVRNLSPNVYTYAVLINALC-----KENRIREARNFLRHLKSSEVVP 423

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            P  Y  VI    K  K DEA   +    E    P  ITF  +I   C +G++ +A+   
Sbjct: 424 KPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTF 483

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           + M E   +P   + + LI+ L +     +A  +  AAL++
Sbjct: 484 YKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 175/377 (46%), Gaps = 34/377 (9%)

Query: 104 AVKFFSEASSYGLAPNSW--TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
            +KFF E S   L+ N    T+ +++R  C       A+ V DCM  +G  P+ +   +L
Sbjct: 92  GLKFF-EFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELL 150

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           V+S  + G+L  A   L+++   G K +   YN LL  L     V+EA  +         
Sbjct: 151 VSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYF 210

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PDVY++  ++ G C++G  ++A E        G  P++V++NTL NG+C+     KG  
Sbjct: 211 VPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD 270

Query: 282 LLKL-MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           LLK  M  +   PD I+Y+++++G  K G ++ A  +F EMV  G + ++   N L+ G 
Sbjct: 271 LLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGF 330

Query: 341 --------CMKSWEEKDLLE------------DAY----------QVFEKMTKKVSVTDP 370
                    M  +E+  LL             D Y          +++E+M  +    + 
Sbjct: 331 GKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNV 390

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY ++I  L K  +  EA   L H      +P+   +N VI   C  GK+D+A  ++  
Sbjct: 391 YTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAE 450

Query: 431 MYEHAKIPSRTSYDMLI 447
           M E    P + ++ +LI
Sbjct: 451 MQEKKCRPDKITFTILI 467



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 103/215 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K   ++FD +   G   +   FN L+     +    +A+  + +    G  P+  
Sbjct: 297 KLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVV 356

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  YC + +  +  K+ + M      PNV T+ +L+N+LCK  R++EA   L  +
Sbjct: 357 TFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHL 416

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P    YN ++ G C  G+V+EA  ++  ++    +PD  T+T ++ G C  GR 
Sbjct: 417 KSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRM 476

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            EA+    + IE    P+ +T N+L +   K G P
Sbjct: 477 VEAISTFYKMIEINCVPDEITINSLISCLLKAGMP 511


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 184/386 (47%), Gaps = 8/386 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           + +L++ L  +   E A+  + +    G A      ++++        F    ++ + M 
Sbjct: 118 YGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMI 174

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            NG  P+V TF  L++  C+ G L  A E+ D+M   G  P +  Y  L++GLC   ++E
Sbjct: 175 SNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIE 234

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  M   ++  G+ P+VYTY  +MDG+CK+  + +A+ L  + +  G+ P+VVTF  L 
Sbjct: 235 EAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILI 294

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G CK G       L   M K +  P+   Y++L++   K G +  A+++F E+ RF   
Sbjct: 295 DGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVS 354

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    + L+RGLC  S       E+A  +FEKMTK+  + +  TY  +I    K  K D
Sbjct: 355 PDVFTYSILIRGLCSVSRT-----EEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMD 409

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +AL       E G  P  ITF+ +I   C    +  A+ +   M   +  P   +Y  +I
Sbjct: 410 KALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMI 469

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +     +A  LY   L  G+ P
Sbjct: 470 DGHCKYGSMKEALKLYSDMLDNGITP 495



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 201/408 (49%), Gaps = 29/408 (7%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   +  ++++ G   +V  +N L+     L   + A++ + +    GL P+  TF I
Sbjct: 233 IEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGI 292

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C   +   AR +   M      PN+  +  L+++ CK G + EA+ +  ++ R  
Sbjct: 293 LIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFE 352

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ TY+ L++GLC V R EEA  +   +  +G+  +  TY +++DG CK G+ ++A+
Sbjct: 353 VSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKAL 412

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+ ++  E GV PNV+TF+TL +GYCK       +G+   M  ++  PD ++Y+ +++G 
Sbjct: 413 EICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGH 472

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K+G ++ A+ ++ +M+  G   +   ++ LL GLC K  +  D LE   +  E  T + 
Sbjct: 473 CKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLC-KDGKISDALELFTEKIEFQTPRC 531

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           +V D G           G K                +   + +  +I  LC +G+  KA+
Sbjct: 532 NV-DAG-----------GSKPS--------------LTNHVAYTALIHGLCQDGQFSKAV 565

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L   M  +   P    Y +++  L Q++  Y    L+   LK GVIP
Sbjct: 566 KLFSDMRRYGLQPDEVIYVVMLRGLFQVK--YILMMLHADMLKFGVIP 611



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 171/381 (44%), Gaps = 30/381 (7%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G   ++   N LL  LV     E   + + E  S GL+P+  TF  +I   C + D  
Sbjct: 140 KVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLL 199

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
            A+++ D M   G  P V  +TIL+  LC   +++EA  +   M  +G  PN+ TYN L+
Sbjct: 200 RAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLM 259

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G C +   ++A  +  ++  +GL PDV T+  ++DG CK G    A  L    I+  VT
Sbjct: 260 DGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVT 319

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PN+  +N+L + YCK G   + + L   +++    PD  +YS L+ GL    +   A +I
Sbjct: 320 PNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNI 379

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL--------------------------- 350
           F++M + G   +    NSL+ G C +   +K L                           
Sbjct: 380 FEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCK 439

Query: 351 ---LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
              L+ A  ++ +M  K    D  TY  +I    K     EAL      ++ G  P   T
Sbjct: 440 IRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYT 499

Query: 408 FNNVIQALCGEGKIDKALLLL 428
            + ++  LC +GKI  AL L 
Sbjct: 500 ISCLLDGLCKDGKISDALELF 520



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 155/292 (53%), Gaps = 13/292 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K   ++F ++ K     +++ +N L+ A   + +   A+  F E   + ++P+ +
Sbjct: 299 KFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVF 358

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+IR  C+ +   EA  + + M   G   N  T+  L++  CK G++ +ALE+  QM
Sbjct: 359 TYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQM 418

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +PN+ T++ L+ G C +  ++ A  +   +    L PDV TYTA++DG CK G  
Sbjct: 419 TENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSM 478

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL-------------LKLMKK 288
            EA++L ++ ++ G+TPN  T + L +G CK+G     + L             +     
Sbjct: 479 KEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGS 538

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           +  L + ++Y+ L++GL + G+   AV +F +M R+G + DE +   +LRGL
Sbjct: 539 KPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 170/358 (47%), Gaps = 22/358 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K +  K+ + ++  +  +G    V  F  L+  L    E + A   F     + + PN  
Sbjct: 264 KLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIA 323

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  YC   D  EA  +   +      P+V T++IL+  LC   R +EA  + ++M
Sbjct: 324 VYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKM 383

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G   N  TYN L+ G C  G++++A E+   +  +G++P+V T++ ++DG+CK+   
Sbjct: 384 TKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNL 443

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             AM + +E + + ++P+VVT+  + +G+CK G+  + + L   M      P+  + S L
Sbjct: 444 QAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCL 503

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFE-------------VDERMMNSLLRGLCMKSWEEK 348
           L+GL K GKI  A+ +F E + F                 +     +L+ GLC      K
Sbjct: 504 LDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSK 563

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH-HAIEMGHIPRT 405
                A ++F  M +     D   Y +++R L + K     L+ LH   ++ G IP +
Sbjct: 564 -----AVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI---LMMLHADMLKFGVIPNS 613


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 186/386 (48%), Gaps = 7/386 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           + +FN +L +LV L    T +    +    G+  N  T SI+I C+C+      +  ++ 
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY PN  T+T L+  LC  G +K+ L   D++     + N  +Y  LL GLC  G
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A ++L  +++   +P+V  Y+A++DG CK    NEA +L +E   R + PNV+T+N
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL   +C  G  M    LL  M  +N  PD  ++S L++ L K GK   A  IF  MV+ 
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQM 247

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   +    N ++ GLC     +   +++A  +  +M  K  V D  TY  +I  L K  
Sbjct: 248 GVNPNVYSYNIMINGLC-----KCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 302

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           +   AL  ++     G     +T+ +++ ALC    +DKA  L   M E    P+  +Y 
Sbjct: 303 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYT 362

Query: 445 MLITKLDQLEKSYDACALYGAALKQG 470
            LI  L +  +  +A  L+   L +G
Sbjct: 363 ALIDGLCKGGRLKNAQELFQHLLVKG 388



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 157/297 (52%), Gaps = 7/297 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   +SE  +  + PN  T++ +I  +C       A  ++  M     +P+V TF+IL++
Sbjct: 169 AYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILID 228

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK G  K A ++   M ++G  PN+ +YN ++ GLC   RV+EA  +L  + +  + P
Sbjct: 229 ALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVP 286

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D  TY +++DG CK GR   A+ L+NE   RG   +VVT+ +L +  CK     K   L 
Sbjct: 287 DTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALF 346

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             MK+R   P   +Y+ L++GL K G+++ A  +F+ ++  G  +D      ++ GLC  
Sbjct: 347 MKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLC-- 404

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
              ++ + ++A  +  KM     + +  T+ I+IR+L +  + D+A   LH  I  G
Sbjct: 405 ---KEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 221/466 (47%), Gaps = 15/466 (3%)

Query: 18  RNHNKIPQFNKLV------VFAAASLSTAESLDLKENPRSLQAQRFVDRI--KASPLKER 69
           R+ + I +FNK++       +    +S ++ +D+K   ++L     +         +   
Sbjct: 5   RHTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFS 64

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
             +   I K G   +   +  L+  L +  E +  + F  +  +     N  ++  ++  
Sbjct: 65  FSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNG 124

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C   +   A K++  + D    PNV  ++ +++ LCK   + EA ++  +M      PN
Sbjct: 125 LCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPN 184

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TYN L+   C  G++  A+ +L  +    + PDVYT++ ++D  CK G++  A ++ +
Sbjct: 185 VITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN--AKQIFH 242

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             ++ GV PNV ++N + NG CK     + + LL+ M  +N +PD ++Y++L++GL K G
Sbjct: 243 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 302

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           +I  A+++  EM   G   D     SLL  LC     +   L+ A  +F KM ++     
Sbjct: 303 RITSALNLMNEMHHRGQPADVVTYTSLLDALC-----KNQNLDKATALFMKMKERGIQPT 357

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  +I  L KG +   A     H +  G      T+  +I  LC EG  D+AL +  
Sbjct: 358 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 417

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            M ++  IP+  +++++I  L + +++  A  L    + +G++  R
Sbjct: 418 KMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLGFR 463


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 211/457 (46%), Gaps = 69/457 (15%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ + +K +G    +  +N L+     + +  TA K   E S   L PN  T++ +I  
Sbjct: 37  VELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDA 96

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC      +A  + D M      P+V T+T ++N LCKSG+++EA  V  +M  +G  PN
Sbjct: 97  YCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPN 156

Query: 190 -----------------------------------IQTYNCLLKGLCYVGRVEEAYEMLM 214
                                              +  Y  L+ GL   G    A +M  
Sbjct: 157 RFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQ 216

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +  + L P+  TY+A++DG CK+G  N+   LL E  E+ + PNV+ ++++ +GY K+G
Sbjct: 217 VLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKG 276

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE----VDE 330
              + + +++ M +RN LP+   Y TL++G  K  +   A+ +FKEM   G E    V +
Sbjct: 277 LLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVID 336

Query: 331 RMMNSLLRGLCMKSWEE--KDLL------------------------EDAYQVFEKMTKK 364
             +N+L R   M+  +E  KD++                         DA+ + ++MT+K
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            S  D   Y ++I  L K  K +    H     ++G  P + TFN +I A C EG +  A
Sbjct: 397 SSGFDVVAYNVLINGLFKLGKYESESFHTGMR-QLGLAPDSATFNTMINAYCKEGNLGNA 455

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKSYD 458
           L LL  M  +   P+  + ++L+ +L    ++EK+ D
Sbjct: 456 LKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 146/292 (50%), Gaps = 5/292 (1%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + FN ++ A         A+K  +E  SYGL PNS T +I+++  C   +  +   +++ 
Sbjct: 437 ATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLND 496

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G+HP  TT   ++++  KS R    L + DQ+  +G K ++ TYN L+   C +G 
Sbjct: 497 MLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGM 556

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +  A  +  ++   G+  D+ TY A++ G+C      +A  + ++ +  GV+PNV T+N 
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNI 616

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L  G        +  GL+  MK+R  +P+  +Y  L++G  K G ++  V ++ EM+  G
Sbjct: 617 LLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKG 676

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F    R  N L+   C    ++   +  A ++ ++M  +    +  TY I+I
Sbjct: 677 FVPKTRTYNVLIS--CFAKGKK---MSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 171/349 (48%), Gaps = 17/349 (4%)

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
           +E+      M   G  P+  TF  ++N+ CK G L  AL++L++M   G KPN  T N L
Sbjct: 418 YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNIL 477

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           ++ LC  G +E+  ++L ++   G  P   T+ AV+D   K  R++  + + ++ +  GV
Sbjct: 478 VQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGV 537

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
             ++ T+NTL + +C+ G   +   + K M  +  L D I+Y+ L++G      ++ A +
Sbjct: 538 KLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFA 597

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           +  +M+  G   +    N LL GL         L+++A  +  +M ++  V +  TY I+
Sbjct: 598 VHSQMLTEGVSPNVETYNILLGGLSAAR-----LIKEAAGLVNQMKERGLVPNATTYDIL 652

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +   GK     E +      I  G +P+T T+N +I       K+ +A  L+  M     
Sbjct: 653 VSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGI 712

Query: 437 IPSRTSYDMLIT---KLDQ-------LEKSYDACA--LYGAALKQGVIP 473
            P+ ++YD+LI    KL +       L++SY A A  L+    ++G IP
Sbjct: 713 PPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 111/501 (22%), Positives = 187/501 (37%), Gaps = 109/501 (21%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G  + V  +  L+  L        A   F       L PN  T+S +I  +C   D  + 
Sbjct: 187 GIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKG 246

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             ++  M +    PNV  ++ +V+   K G L EA++V+ +M +    PN+  Y  L+ G
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306

Query: 200 -----------------------------------LCYVGRVEEAYEMLMNVKNDGLKPD 224
                                              L   GR+EEA E+  ++ + GL PD
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIER------------------------------ 254
              YT++MDGF K G+ ++A  +  E  E+                              
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTG 426

Query: 255 ----GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G+ P+  TFNT+ N YCKEG     + LL  MK     P+ I+ + L+  L   G+
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 311 IRPAVSIFKEMVRFGF-----------------------------------EVDERMMNS 335
           I   + +  +M+  GF                                   ++D    N+
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+   C        ++  A  VF+ M  K  + D  TY  +I          +A      
Sbjct: 547 LISTFC-----RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQ 601

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
            +  G  P   T+N ++  L     I +A  L+  M E   +P+ T+YD+L++   ++  
Sbjct: 602 MLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGN 661

Query: 456 SYDACALYGAALKQGVIPQRK 476
             +   LY   + +G +P+ +
Sbjct: 662 MKECVKLYCEMITKGFVPKTR 682



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 40/262 (15%)

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG---TPM 277
           ++  V  +  ++DG+C+ G  + A+ELL      G  P++VT+NTL NG+CK G   T  
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 278 KGVGLLKLMK----------------KRNCL----------------PDKISYSTLLNGL 305
           K +G + L+                 K  CL                PD ++Y+ ++NGL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GK+  A S+F+EM   G   +     +L+  L    ++E ++ E A+ +  +M  + 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSL----FKEGNVAE-AFVLQGRMVVRG 187

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D   Y  ++  L K    + A       +E   +P  +T++ +I   C  G ++K  
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGE 247

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
           LLL  M E    P+   Y  ++
Sbjct: 248 LLLQEMEEKHIFPNVIVYSSIV 269


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 184/394 (46%), Gaps = 5/394 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G + +    N L+     L   +      ++    GL P   TF+ +I        F +A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            ++ D M   G  P+  T+T ++N LCK G    A  +  +M   GC+ N+ TY+ L+  
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC   RV EA ++   +K   + P ++TYT+++ G C   R  EA  LLNE     + PN
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VVTFN L + +CKEG  +   G+LK M +    PD ++Y++L+ G   W ++  A  +F 
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            M+  G + D    + L+ G C     +   +++A Q+F +M  + S  +  +Y  +I  
Sbjct: 245 VMITKGCKPDVFSYSILINGYC-----KAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHG 299

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           L +  +  EA     +    G++P   T+  ++   C +G + KA  L   M      P+
Sbjct: 300 LCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 359

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              Y++L+  + +     DA  L+      G+ P
Sbjct: 360 LVMYNILVNAMCKSGNLKDARELFSELFVIGLQP 393



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 190/401 (47%), Gaps = 40/401 (9%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  +++ G   +V  ++ L+ +L        A+  FS   +  ++P  +T++ +I+  C
Sbjct: 102 LFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLC 161

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N + + EA  +++ M      PNV TF +LV++ CK G++  A  VL  M  +G +P++ 
Sbjct: 162 NFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVV 221

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G      V EA ++   +   G KPDV++Y+ +++G+CK  R +EA +L NE 
Sbjct: 222 TYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEM 281

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I +G TPN V++NTL +G C+ G   +   L K M     LP+  +Y+ LL+G  K G +
Sbjct: 282 IHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYL 341

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +F+ M     + +  M N L+  +C KS      L+DA ++F ++          
Sbjct: 342 GKAFRLFRAMQSTYLKPNLVMYNILVNAMC-KSGN----LKDARELFSEL---------- 386

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
                                      +G  P    +  +I  LC EG +D+AL     M
Sbjct: 387 -------------------------FVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNM 421

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            +    P   SY+++I    Q +    A  L G    +G I
Sbjct: 422 EDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFI 462



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 165/332 (49%), Gaps = 6/332 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +DIF  +K    + ++  +  L+  L   +  + A    +E +S  + PN  
Sbjct: 127 KYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVV 186

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF++++  +C +     A  V+  M + G  P+V T+  L+        + EA ++ D M
Sbjct: 187 TFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVM 246

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GCKP++ +Y+ L+ G C   R++EA ++   + + G  P+  +Y  ++ G C++GR 
Sbjct: 247 ITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRL 306

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +L       G  PN+ T+  L +G+CK+G   K   L + M+     P+ + Y+ L
Sbjct: 307 REAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNIL 366

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +N + K G ++ A  +F E+   G + + ++  +++ GLC     ++ LL++A + F  M
Sbjct: 367 VNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLC-----KEGLLDEALEAFRNM 421

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
                  D  +Y ++IR   + K    A +HL
Sbjct: 422 EDDGCPPDEFSYNVIIRGFLQHKDESRA-VHL 452



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 146/298 (48%), Gaps = 3/298 (1%)

Query: 33  AAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDL 91
           A+A L+   SL++  N  +      VD   K   +     +  ++ + G    V  +N L
Sbjct: 169 ASALLNEMTSLNIMPNVVTFNV--LVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSL 226

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           +    M  E   A K F    + G  P+ +++SI+I  YC      EA+++ + M   G 
Sbjct: 227 MYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGS 286

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            PN  ++  L++ LC+ GRL+EA ++   M   G  PN+ TY  LL G C  G + +A+ 
Sbjct: 287 TPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFR 346

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +   +++  LKP++  Y  +++  CK G   +A EL +E    G+ PNV  + T+ NG C
Sbjct: 347 LFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLC 406

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           KEG   + +   + M+   C PD+ SY+ ++ G L+      AV +  EM   GF  D
Sbjct: 407 KEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E  D+F ++  +G   ++  +  LL           A + F    S  L PN   ++I
Sbjct: 306 LREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNI 365

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C   +  +AR++   +F  G  PNV  +T ++N LCK G L EALE    M   G
Sbjct: 366 LVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDG 425

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           C P+  +YN +++G         A  ++  +++ G   D  T
Sbjct: 426 CPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 183/363 (50%), Gaps = 5/363 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE  D+FD++   G N  V  +  +L               F      G+AP+ +
Sbjct: 340 KYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 399

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS++I+ Y N     +A  + + M D+G  P+V T+T ++ +LC+ G++ +A+E  +QM
Sbjct: 400 TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQM 459

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+   Y+CL++G C  G + +A E+++ + N+G++ D+  ++++++  CK+GR 
Sbjct: 460 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRI 519

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  + +  +  G  P+ V ++ L +GYC  G   K + +   M      P+ + Y TL
Sbjct: 520 MDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTL 579

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG  K G+I   +S+F+EM++ G +    + N ++ GL +           A   F +M
Sbjct: 580 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVP-----AKVKFHEM 634

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           T+     +  TY IV+R   K +  DEA+        M      IT N +I  +    ++
Sbjct: 635 TESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 694

Query: 422 DKA 424
           ++A
Sbjct: 695 EEA 697



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 200/424 (47%), Gaps = 28/424 (6%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET-------AVKFFSEASSYG-----LAP 118
           D+ D +++ GT     D N  L AL               AV  F+ A+S       L+P
Sbjct: 54  DLLDELQRRGTPVLGRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPRVLSP 113

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
            S T++I++ C    +    A      +   G   ++     L+   C++ R  EAL++L
Sbjct: 114 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDIL 173

Query: 179 -DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDGF 235
             +   +GC P++ +Y+ LLK LC  G+  +A ++L  +   G    PDV  YT V+D F
Sbjct: 174 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCF 233

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
            K G  N+A +L  E ++RG+ P++VT++++ +  CK     K    L+ M  +  LPD 
Sbjct: 234 FKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDN 293

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
            +Y+ L+ G    G+ + AV +FKEM R     D   +N L+  LC     +   +++A 
Sbjct: 294 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLC-----KYGKIKEAR 348

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNV 411
            VF+ M  K    D  +Y I++     G  T   L+ +    ++    G  P   TF+ +
Sbjct: 349 DVFDTMAMKGQNPDVFSYKIML----NGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVL 404

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I+A    G +DKA+++   M +H   P   +Y  +I  L ++ K  DA   +   + QGV
Sbjct: 405 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 464

Query: 472 IPQR 475
            P +
Sbjct: 465 APDK 468



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 181/366 (49%), Gaps = 8/366 (2%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           NW+   +N+L+       + + AV+ F E   + + P+  T ++++   C      EAR 
Sbjct: 293 NWT---YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARD 349

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V D M   G +P+V ++ I++N     G L +  ++ D M   G  P+I T++ L+K   
Sbjct: 350 VFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYA 409

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G +++A  +   +++ G+KPDV TYT V+   C++G+ ++AME  N+ I++GV P+  
Sbjct: 410 NCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 469

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            ++ L  G+C  G+ +K   L+  +       D + +S+++N L K G+I  A +IF   
Sbjct: 470 AYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLT 529

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           V  G   D  + + L+ G C+    EK     A +VF+ M       +   YG ++    
Sbjct: 530 VNVGQHPDAVVYSMLMDGYCLVGKMEK-----ALRVFDAMVSAGIEPNVVVYGTLVNGYC 584

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K  + DE L      ++ G  P TI +N +I  L   G+   A +    M E     ++ 
Sbjct: 585 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKC 644

Query: 442 SYDMLI 447
           +Y++++
Sbjct: 645 TYNIVL 650



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 189/407 (46%), Gaps = 5/407 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE + +F  +++      V   N L+ +L    + + A   F   +  G  P+ +++ IM
Sbjct: 310 KEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIM 369

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  Y  K    +   + D M  +G  P++ TF++L+ +    G L +A+ + ++M   G 
Sbjct: 370 LNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGV 429

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           KP++ TY  ++  LC +G++++A E    + + G+ PD Y Y  ++ GFC  G   +A E
Sbjct: 430 KPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKE 489

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E +  G+  ++V F+++ N  CK G  M    +  L       PD + YS L++G  
Sbjct: 490 LILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYC 549

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             GK+  A+ +F  MV  G E +  +  +L+ G C     +   +++   +F +M +K  
Sbjct: 550 LVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYC-----KIGRIDEGLSLFREMLQKGI 604

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                 Y I+I  L    +T  A +  H   E G      T+N V++        D+A+ 
Sbjct: 605 KPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIF 664

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L   +          + + +I  + Q  +  +A  L+ +  + G++P
Sbjct: 665 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 162/360 (45%), Gaps = 11/360 (3%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           +P+   ++ +I C+  + D  +A  +   M   G  P++ T++ +V++LCK+  + +A  
Sbjct: 220 SPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEA 279

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
            L QM   G  P+  TYN L+ G    G+ +EA  +   ++   + PDV T   +M   C
Sbjct: 280 FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLC 339

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G+  EA ++ +    +G  P+V ++  + NGY  +G  +    L  LM      PD  
Sbjct: 340 KYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 399

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           ++S L+      G +  A+ IF EM   G + D     +++  LC         ++DA +
Sbjct: 400 TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGK-----MDDAME 454

Query: 357 VFEKMTKKVSVTDPGTYGIVIR---TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
            F +M  +    D   Y  +I+   T G   K  E ++ +   +  G     + F+++I 
Sbjct: 455 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEI---MNNGMRLDIVFFSSIIN 511

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            LC  G+I  A  +  L     + P    Y ML+     + K   A  ++ A +  G+ P
Sbjct: 512 NLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 571



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 86/222 (38%), Gaps = 35/222 (15%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           I  +G    +  F+ ++  L  L     A   F    + G  P++  +S+++  YC    
Sbjct: 494 IMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGK 553

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP------- 188
             +A +V D M   G  PNV  +  LVN  CK GR+ E L +  +M + G KP       
Sbjct: 554 MEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 613

Query: 189 ----------------------------NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
                                       N  TYN +L+G       +EA  +   ++   
Sbjct: 614 IIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMN 673

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           +K D+ T   ++ G  +  R  EA +L       G+ P VVT
Sbjct: 674 VKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 213/463 (46%), Gaps = 47/463 (10%)

Query: 48  NPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        +D  IK   ++E + I D +   G   +V  +N ++  +    E   A+ 
Sbjct: 343 NPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMS 402

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F+E    GL P++WT++++I  Y   +D  +A +++  M      P+  T+++L++ LC
Sbjct: 403 LFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLC 462

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTY--------------------------------- 193
            S  L++A EVLDQM R G KPN+  Y                                 
Sbjct: 463 HSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLF 522

Query: 194 --NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
             NCL+ GLC   +VEEA  +L+++   G+KP+ +TY A ++ + K G    A     + 
Sbjct: 523 CYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDM 582

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  G+ PN V +  L  G+C  G  ++ +   K M ++  +PD  +YS +++ L K GK 
Sbjct: 583 LSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKT 642

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           + A+ +F + ++ G   D  + NSL+ G C    +E D +E A Q++++M       +  
Sbjct: 643 KEAMGVFLKFLKTGVVPDVFLYNSLISGFC----KEGD-IEKASQLYDEMLHNGINPNIV 697

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            Y  +I  L K  +  +A        E   +P  +T++ +I   C  G + +A  L   M
Sbjct: 698 VYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757

Query: 432 YEHAKIPSRTSYDMLIT---KLDQLEKSYDACALYGAALKQGV 471
                 P    Y +LI    K   LEK   A +L+  A ++ V
Sbjct: 758 ISKGISPDGYIYCILIDGCGKEGNLEK---ALSLFHEAQQKSV 797



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 211/477 (44%), Gaps = 66/477 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + + + +F+ +   G       +N L+   +  ++   A +  +E  +  L P+ +
Sbjct: 393 KAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S++I   C+ +D  +A +V+D M  NG  PNV  +  L+ +  +  R + A+E+L  M
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++  YNCL+ GLC   +VEEA  +L+++   G+KP+ +TY A ++ + K G  
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A     + +  G+ PN V +  L  G+C  G  ++ +   K M ++  +PD  +YS +
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-------------------- 341
           ++ L K GK + A+ +F + ++ G   D  + NSL+ G C                    
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692

Query: 342 --------------------------MKSWEEKDLLED-------------------AYQ 356
                                         EEKDL+ D                   A++
Sbjct: 693 NPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFK 752

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +F++M  K    D   Y I+I   GK    ++AL  L H  +   +     FN++I + C
Sbjct: 753 LFDEMISKGISPDGYIYCILIDGCGKEGNLEKAL-SLFHEAQQKSVGSLSAFNSLIDSFC 811

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             GK+ +A  L   M +    P+  +Y +LI    + E   +A  L+     + +IP
Sbjct: 812 KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP 868



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 178/384 (46%), Gaps = 6/384 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L++ L    + E A     +    G+ PN+ T+   I  Y    +   A +    M 
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G  PN   +TIL+   C  G   EAL     M   G  P+I+ Y+ ++  L   G+ +
Sbjct: 584 SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTK 643

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  + +     G+ PDV+ Y +++ GFCK G   +A +L +E +  G+ PN+V +NTL 
Sbjct: 644 EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG CK G   K   L   +++++ +PD ++YST+++G  K G +  A  +F EM+  G  
Sbjct: 704 NGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGIS 763

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D  +   L+ G C K       LE A  +F +  +K SV     +  +I +  K  K  
Sbjct: 764 PDGYIYCILIDG-CGKEGN----LEKALSLFHEAQQK-SVGSLSAFNSLIDSFCKHGKVI 817

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA       ++    P  +T+  +I A      +++A  L   M     IP+  +Y  L+
Sbjct: 818 EARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLL 877

Query: 448 TKLDQLEKSYDACALYGAALKQGV 471
              +Q+   +   +L+     +G+
Sbjct: 878 LSYNQIGNRFKMISLFKDMEARGI 901



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 171/359 (47%), Gaps = 5/359 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL P+  T+++++  +C +    EA+ + + M  +G +PN  T+T L++   K G ++EA
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L + D+M   G K N+ TYN ++ G+   G + +A  +   +   GL+PD +TY  ++DG
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDG 425

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           + K     +A ELL E   R +TP+  T++ L +G C      K   +L  M +    P+
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
              Y TL+   ++  +   A+ + K M+  G   D    N L+ GLC         +E+A
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC-----RAKKVEEA 540

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
             +   M +K    +  TYG  I    K  +   A  +    +  G +P  + +  +I+ 
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKG 600

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            C  G   +AL     M E   IP   +Y  +I  L +  K+ +A  ++   LK GV+P
Sbjct: 601 HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVP 659



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 165/356 (46%), Gaps = 5/356 (1%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN +T++  I   C      EA +V   M + G  P+  T+T+LV+  CK  R KEA  +
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
            + M   G  PN  TY  L+ G    G +EEA  +   +   GLK +V TY A++ G  K
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G   +AM L NE +  G+ P+  T+N L +GY K     K   LL  MK R   P   +
Sbjct: 394 AGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           YS L++GL     ++ A  +  +M+R G +      N  + G  +K++ ++   E A ++
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKP-----NVFMYGTLIKAYVQESRYEMAIEL 508

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            + M     + D   Y  +I  L + KK +EA + L    E G  P   T+   I     
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            G+I  A      M     +P+   Y +LI     +  + +A + +   L++G+IP
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP 624



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 193/413 (46%), Gaps = 65/413 (15%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           E + A ++F +  S G+ PN+  ++I+I+ +C+  +  EA     CM + G  P++  ++
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYS 630

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            +++SL K+G+ KEA+ V  +  + G  P++  YN L+ G C  G +E+A ++   + ++
Sbjct: 631 AIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G+ P++  Y  +++G CK+G   +A EL +E  E+ + P+VVT++T+ +GYCK G   + 
Sbjct: 691 GINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEA 750

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR---------------- 323
             L   M  +   PD   Y  L++G  K G +  A+S+F E  +                
Sbjct: 751 FKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSF 810

Query: 324 ------------FGFEVDERMM-NSLLRGLCMKSWEEKDLLEDAYQVFEKMT-------- 362
                       F   VD+++  N +   + + ++ + +++E+A Q+F  M         
Sbjct: 811 CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT 870

Query: 363 -----------------KKVSV----------TDPGTYGIVIRTLGKGKKTDEALIHLHH 395
                            K +S+           D   YG++     K  K+ EAL  L+ 
Sbjct: 871 LTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 930

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM-YEHAKIPSRTSYDMLI 447
           ++  G       F+ +I  LC E +I   L LL  M  E   + S+T   +L+
Sbjct: 931 SLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLL 983



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 195/407 (47%), Gaps = 5/407 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE   IF+S+   G N +   +  L+   +     E A++   E  + GL  N  T++ M
Sbjct: 328 KEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAM 387

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I       +  +A  + + M   G  P+  T+ +L++   KS  + +A E+L +M     
Sbjct: 388 IGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P+  TY+ L+ GLC+   +++A E+L  +  +G+KP+V+ Y  ++  + +  R   A+E
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           LL   I  GV P++  +N L  G C+     +   LL  M ++   P+  +Y   +N   
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G+I+ A   FK+M+  G   +  +   L++G C    +  + +E A   F+ M +K  
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHC----DVGNTVE-ALSTFKCMLEKGL 622

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           + D   Y  +I +L K  KT EA+      ++ G +P    +N++I   C EG I+KA  
Sbjct: 623 IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQ 682

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L   M  +   P+   Y+ LI  L +L +   A  L+    ++ ++P
Sbjct: 683 LYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVP 729



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 166/355 (46%), Gaps = 10/355 (2%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K   +++   ++D +  +G N ++  +N L+  L  L E   A + F E     L P+  
Sbjct: 673  KEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVV 732

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD-- 179
            T+S +I  YC   +  EA K+ D M   G  P+   + IL++   K G L++AL +    
Sbjct: 733  TYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEA 792

Query: 180  QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            Q   +G   ++  +N L+   C  G+V EA E+  ++ +  L P++ TYT ++D + K  
Sbjct: 793  QQKSVG---SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAE 849

Query: 240  RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
               EA +L  +   R + PN +T+ +L   Y + G   K + L K M+ R    D I+Y 
Sbjct: 850  MMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYG 909

Query: 300  TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
             + +   K GK   A+ +  + +  G ++++ + ++L+  LC    +EK  +    ++  
Sbjct: 910  VMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC----KEKQ-ISTVLELLS 964

Query: 360  KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            +M K+       T   ++    K    DEA   L     +G +P +++  + I  
Sbjct: 965  EMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIST 1019



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 157/370 (42%), Gaps = 39/370 (10%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY---- 193
           EA  V       G+ P +     L+  L K+  +    +V   M      P++ TY    
Sbjct: 190 EASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVI 249

Query: 194 ------------------------------NCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
                                         N  + GLC  G V+EA E+   +   GL P
Sbjct: 250 KAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGP 309

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D +TYT ++DGFCK  RS EA  +       G+ PN  T+  L +G+ KEG   + + + 
Sbjct: 310 DGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIK 369

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M  R    + ++Y+ ++ G+ K G++  A+S+F EM+  G E D    N L+ G  +K
Sbjct: 370 DEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGY-LK 428

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           S +    +  A ++  +M  +     P TY ++I  L       +A   L   I  G  P
Sbjct: 429 SHD----MAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
               +  +I+A   E + + A+ LL +M  +  +P    Y+ LI  L + +K  +A  L 
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544

Query: 464 GAALKQGVIP 473
               ++G+ P
Sbjct: 545 VDMGEKGIKP 554



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 6/320 (1%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N+T F I ++     G L EA  V       G  P +   N L++ L     +   +++ 
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
            ++    + PDVYTYT V+   CKVG   +   +L+E +E+   PN+ T+N    G C+ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSE-MEKECKPNLFTYNAFIGGLCQT 289

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   + + + KLM ++   PD  +Y+ L++G  K  + + A  IF+ M   G   +    
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            +L+ G       ++  +E+A ++ ++M  +    +  TY  +I  + K  +  +A+   
Sbjct: 350 TALIDGFI-----KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLF 404

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
           +  +  G  P T T+N +I        + KA  LL  M      PS  +Y +LI+ L   
Sbjct: 405 NEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHS 464

Query: 454 EKSYDACALYGAALKQGVIP 473
                A  +    ++ GV P
Sbjct: 465 SDLQKANEVLDQMIRNGVKP 484



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 6/167 (3%)

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G +  A S+F   +  GF       N+L+R L      + +++   ++V+  M +   V 
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLL-----KANMMGLFWKVYGSMVEAKIVP 240

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  TY  VI+   K     +  + L   +E    P   T+N  I  LC  G +D+AL + 
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSE-MEKECKPNLFTYNAFIGGLCQTGAVDEALEVK 299

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            LM E    P   +Y +L+    + ++S +A  ++ +    G+ P R
Sbjct: 300 KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 198/436 (45%), Gaps = 31/436 (7%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   + +  K+ G   SV  +N +L  L    + E A++   EA     APN  +++I+I
Sbjct: 360 EAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIL-EAMKMDAAPNLTSYNILI 418

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C   +   A KV D M + G  PN+ T  I+++ LCK+ RL EA  +   +    C 
Sbjct: 419 DMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCT 478

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  T+  L+ GL   G+V +AY +   + + G  P+   YT+++  F K GR  +  ++
Sbjct: 479 PDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKI 538

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E + RG +P+++  N   +   K G   KG  L + +K +   PD  SYS L++GL+K
Sbjct: 539 YKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVK 598

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK------------------- 348
            G  +    +F EM   G  +D R  N ++ G C      K                   
Sbjct: 599 GGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVT 658

Query: 349 -----------DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
                      D L++AY +FE+   K    +   Y  +I   GK  + DEA + L   +
Sbjct: 659 YGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELM 718

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
           + G  P T T+N ++ AL    +ID+AL+    M      P+  +Y +++  L ++ K  
Sbjct: 719 QKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFN 778

Query: 458 DACALYGAALKQGVIP 473
            A   +    KQG+ P
Sbjct: 779 KAFVFWQEMQKQGLKP 794



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 205/439 (46%), Gaps = 6/439 (1%)

Query: 36  SLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMA 94
           +L   E++ +   P        +D + KA  L+  + + DS+K+ G   ++   N ++  
Sbjct: 396 ALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDR 455

Query: 95  LVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPN 154
           L      + A   F         P+S TF  +I          +A  + + M D+G  PN
Sbjct: 456 LCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPN 515

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
              +T L+ +  K GR ++  ++  +M   GC P++   N  +  +   G +E+   +  
Sbjct: 516 AVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFE 575

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +K  GL PDV +Y+ ++ G  K G S +  +L  E  E+G+  +   +N + +G+CK G
Sbjct: 576 EIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSG 635

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              K   LL+ MK +   P  ++Y ++++GL K  ++  A  +F+E      +++  + +
Sbjct: 636 KVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYS 695

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           SL+ G     + +   +++AY + E++ +K    +  T+  ++  L K ++ DEAL+   
Sbjct: 696 SLIDG-----FGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQ 750

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
           +   +   P  +T++ ++  LC   K +KA +    M +    P+  +Y  +I+ L ++ 
Sbjct: 751 NMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVG 810

Query: 455 KSYDACALYGAALKQGVIP 473
              +A  L+      G IP
Sbjct: 811 NVLEAKDLFERFKSSGGIP 829



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 187/401 (46%), Gaps = 12/401 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +++ +   G   +   +  L+        +E   K + E    G +P+    +  + C  
Sbjct: 503 LYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVF 562

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +  + R + + +   G  P+V +++IL++ L K G  K+  ++  +M   G   + +
Sbjct: 563 KAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTR 622

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            YN ++ G C  G+V +AY++L  +K  GL+P V TY +V+DG  K+ R +EA  L  EA
Sbjct: 623 AYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 682

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             + V  NVV +++L +G+ K G   +   +L+ + ++   P+  +++ LL+ L+K  +I
Sbjct: 683 KSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEI 742

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+  F+ M       +E   + ++ GLC      K     A+  +++M K+    +  
Sbjct: 743 DEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNK-----AFVFWQEMQKQGLKPNTI 797

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L +     EA          G IP +  +N +I+ L    K   A    +++
Sbjct: 798 TYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDA----YIL 853

Query: 432 YEHAKIPS-RTSYDMLITKLDQLEKS--YDACALYGAALKQ 469
           +E  ++   R      +  LD L K+   +  A+ GA L++
Sbjct: 854 FEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLRE 894



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 181/424 (42%), Gaps = 47/424 (11%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N LLM +      E   +   E S  G  P++ T   M+  +       EA  VI+ M 
Sbjct: 135 YNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMR 194

Query: 148 -----------------------------------DNGYHPNVTTFTILVNSLCKSGRLK 172
                                              + GY   V  FT L+    + GR+ 
Sbjct: 195 KFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVD 254

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
            AL +LD+M       ++  YN  +     VG+V+ A++    +K+ GL PD  T+T+++
Sbjct: 255 AALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMI 314

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
              CK  R +EA+EL  E       P V  +NT+  GY   G   +   LL+  K++ C+
Sbjct: 315 GVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCI 374

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P  I+Y+ +L  L + GK+  A+ I + M +     +    N L+  LC K+ E    LE
Sbjct: 375 PSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLC-KAGE----LE 428

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA---LIHLHHAIEMGHIPRTITFN 409
            A +V + M +     +  T  I+I  L K ++ DEA    + L H +     P ++TF 
Sbjct: 429 AALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV---CTPDSVTFC 485

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           ++I  L   GK++ A +L   M +  + P+   Y  LI    +  +  D   +Y   + +
Sbjct: 486 SLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHR 545

Query: 470 GVIP 473
           G  P
Sbjct: 546 GCSP 549



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 5/330 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++   +F+ IK  G    V  ++ L+  LV     +   K F E    GL  ++ 
Sbjct: 563 KAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTR 622

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++I+I  +C      +A ++++ M   G  P V T+  +++ L K  RL EA  + ++ 
Sbjct: 623 AYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 682

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                  N+  Y+ L+ G   VGR++EAY +L  +   GL P+ YT+  ++D   K    
Sbjct: 683 KSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEI 742

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA+            PN VT++ + NG CK     K     + M+K+   P+ I+Y+T+
Sbjct: 743 DEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTM 802

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL + G +  A  +F+     G   D    N+++ GL   S   K +  DAY +FE+ 
Sbjct: 803 ISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGL---SNANKAM--DAYILFEET 857

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             K       T  +++  L K    ++A I
Sbjct: 858 RLKGCRIYSKTCVVLLDALHKADCLEQAAI 887



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 168/359 (46%), Gaps = 8/359 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K+  L+E   + ++++K     + S +  L+ AL   +E +  +    +    G     
Sbjct: 178 VKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTV 237

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             F+ +I  +  +     A  ++D M  N ++ ++  + + ++   K G++  A +   +
Sbjct: 238 HLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHE 297

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           +   G  P+  T+  ++  LC   RV+EA E+   + ++   P VY Y  ++ G+  VG+
Sbjct: 298 LKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGK 357

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            NEA  LL     +G  P+V+ +N +     ++G   + + +L+ M K +  P+  SY+ 
Sbjct: 358 FNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNI 416

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++ L K G++  A+ +   M   G   +   +N ++  LC     +   L++A  +F  
Sbjct: 417 LIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLC-----KAQRLDEACSIFLG 471

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL--CG 417
           +  KV   D  T+  +I  LG+  K ++A +     ++ G  P  + + ++I+    CG
Sbjct: 472 LDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCG 530


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 204/409 (49%), Gaps = 8/409 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE  + FDS+   G    +  +  LL            +  F+   S G+A N   F+I+
Sbjct: 387 KEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTIL 446

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I  Y  +    +A  +   M   G  P+V T++ ++++  + GRL +A+E  +QM   G 
Sbjct: 447 IHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGI 506

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL-KPDVYTYTAVMDGFCKVGRSNEAM 245
           +PN   Y+ +++G C  G + +A E++  + N G+ +PD+  +++V++  CK GR  +A 
Sbjct: 507 QPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAH 566

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ + A + G  P V+TFN+L +GYC  G   K   +L  M+     PD ++Y+TLL+G 
Sbjct: 567 DIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGY 626

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I   +++F+EM R G +      N++  G+ +           A + F +M +  
Sbjct: 627 FKNGRINDGLTLFREMQRKGVKP-----NTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT-FNNVIQALCGEGKIDKA 424
           +      YGI++  L +    DEA+I L   +   ++  +IT  N +I A+    + ++A
Sbjct: 682 TTVTVSIYGIILGGLCRNNCADEAII-LFQKLGTMNVKFSITILNTMINAMYKVQRKEEA 740

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L   +     +P+ ++Y ++I  L +     DA  ++ +  K G++P
Sbjct: 741 KELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVP 789



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 192/409 (46%), Gaps = 6/409 (1%)

Query: 67  KERIDIFDSIKKDGTNWS--VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           +  +D+   + K G   S  V  ++ ++       E   A   F E +  G+ P+  T++
Sbjct: 245 QRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYN 304

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           ++I   C      +A  V+  M  +G  P+  T++ +++     GRLKEA ++  +M + 
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKR 364

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  PNI T N  L  LC  GR +EA E   ++   G KPD+++Y  ++ G+   G   + 
Sbjct: 365 GLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADM 424

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           + L N     G+  N   F  L + Y K G     + +   M+++   PD ++YST+++ 
Sbjct: 425 IGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIST 484

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             + G++  A+  F +MV  G + +  + +S+++G CM       L++    V E + K 
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGG----LVKAKELVSEMINKG 540

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +   D   +  VI +L K  +  +A      A ++G  P  ITFN++I   C  GK+DKA
Sbjct: 541 IPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKA 600

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +L  M      P   +Y+ L+    +  +  D   L+    ++GV P
Sbjct: 601 FKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKP 649



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 187/386 (48%), Gaps = 31/386 (8%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +F+S+K +G   +   F  L+ A       + A+  F+E    G++P+  T+S +I  
Sbjct: 425 IGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIST 484

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC-KP 188
           +       +A +  + M   G  PN   ++ ++   C  G L +A E++ +M   G  +P
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           +I  ++ ++  LC  GRV +A+++     + G +P V T+ +++DG+C VG+ ++A ++L
Sbjct: 545 DIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKIL 604

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +     GV P++VT+NTL +GY K G    G+ L + M+++   P+ ++Y  +L GL + 
Sbjct: 605 DAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL----------------- 351
           G+   A   F EM+  G  V   +   +L GLC  +  ++ ++                 
Sbjct: 665 GRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITIL 724

Query: 352 -------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
                        E+A ++F  ++    + +  TYG++I  L K    ++A        +
Sbjct: 725 NTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEK 784

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKA 424
            G +P +   N +I+ L  +G+I KA
Sbjct: 785 SGIVPGSRLLNRIIRMLLEKGEIAKA 810



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 197/468 (42%), Gaps = 66/468 (14%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  + + G    V  +N ++ AL      + A     + ++ G  P++ T+S MI  Y 
Sbjct: 287 LFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYA 346

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA K+   M   G  PN+ T    + SLCK GR KEA E  D M   G KP+I 
Sbjct: 347 TLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIF 406

Query: 192 TYNCLLKGL------------------------CYV-----------GRVEEAYEMLMNV 216
           +Y  LL G                         C+V           G V++A  +   +
Sbjct: 407 SYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM 466

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           +  G+ PDV TY+ V+  F ++GR  +AME  N+ + RG+ PN   ++++  G+C  G  
Sbjct: 467 QQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGL 526

Query: 277 MKGVGLLKLMKKRNC-LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
           +K   L+  M  +    PD + +S+++N L K G++  A  IF      G        NS
Sbjct: 527 VKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNS 586

Query: 336 LLRGLCM-----KSWEEKDLLE-------------------------DAYQVFEKMTKKV 365
           L+ G C+     K+++  D +E                         D   +F +M +K 
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKG 646

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TYGI++  L +  +T  A    H  IE G       +  ++  LC     D+A+
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +L   +       S T  + +I  + ++++  +A  L+      G++P
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLP 754



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 171/384 (44%), Gaps = 36/384 (9%)

Query: 77  KKDGTNWSVSDF---NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           ++ GT  +V  F   N L+         +  +  F      GL  +  T + +++C C  
Sbjct: 146 EEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYA 205

Query: 134 NDFFEARKVI-DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG--CKPNI 190
           N   EA  V+   M + G  PN  +++I++ +LC +   + AL++L  M + G  C P++
Sbjct: 206 NRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDV 265

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             Y+ ++ G    G   +A  +   +   G+KPDV TY  ++D  CK    ++A  +L +
Sbjct: 266 VAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G  P+ VT++ + +GY   G   +   + + MKKR  +P+ ++ ++ L  L K G+
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGR 385

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRG------------------------------L 340
            + A   F  M   G + D     +LL G                              +
Sbjct: 386 SKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTI 445

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            + ++ ++ +++DA  +F +M ++    D  TY  VI T  +  +  +A+   +  +  G
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARG 505

Query: 401 HIPRTITFNNVIQALCGEGKIDKA 424
             P T  ++++IQ  C  G + KA
Sbjct: 506 IQPNTAVYSSIIQGFCMHGGLVKA 529



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 152/361 (42%), Gaps = 47/361 (13%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P   T+ IL++  C++ R    L +   + R G K +  T N LLK LCY  R EEA  +
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 213 L--------------------------------------MNVKNDGLKPDVYTYTAVMDG 234
           L                                      M  +     PDV  Y+ V+ G
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           F   G + +A  L +E   +GV P+VVT+N + +  CK     K   +L+ M      PD
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++YS +++G    G+++ A  +F+EM + G   +    NS L  LC          ++A
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRS-----KEA 389

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLG-KGKKTDEALIHLHHAIEMGHIPRTI-TFNNVI 412
            + F+ MT K    D  +Y  ++     +G   D  +I L ++++   I      F  +I
Sbjct: 390 AEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFAD--MIGLFNSMKSNGIAANCHVFTILI 447

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            A    G +D A+L+   M +    P   +Y  +I+   ++ +  DA   +   + +G+ 
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQ 507

Query: 473 P 473
           P
Sbjct: 508 P 508



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 5/285 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F  A+  G  P   TF+ +I  YC      +A K++D M   G  P++ T+  L++
Sbjct: 565 AHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLD 624

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
              K+GR+ + L +  +M R G KPN  TY  +L GL   GR   A +    +   G   
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV 684

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            V  Y  ++ G C+   ++EA+ L  +     V  ++   NT+ N   K     +   L 
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF 744

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             +     LP++ +Y  ++  LLK G +  A ++F  M + G     R++N ++R L   
Sbjct: 745 ATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLL-- 802

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
              EK  +  A     K+  K  + +  T  +++    +  K  E
Sbjct: 803 ---EKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQE 844



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 4/225 (1%)

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           EA  +   P   T+N L +  C+   P  G+ L   + +     D+I+ +TLL  L    
Sbjct: 147 EAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYAN 206

Query: 310 KIRPAVSIF-KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           +   AV++    M   G   +    + +L+ LC  S  ++ L  D  Q+  K     S  
Sbjct: 207 RTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRAL--DLLQMMAKQGGACS-P 263

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D   Y  VI       +T +A    H     G  P  +T+N +I ALC    +DKA L+L
Sbjct: 264 DVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVL 323

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M      P   +Y  +I     L +  +A  ++    K+G+IP
Sbjct: 324 RQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIP 368



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/114 (21%), Positives = 50/114 (43%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E I +F  +      +S++  N ++ A+  +  +E A + F+  S+ GL PN  T+ +MI
Sbjct: 704 EAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
                     +A  +   M  +G  P       ++  L + G + +A   L ++
Sbjct: 764 INLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 205/416 (49%), Gaps = 6/416 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE  DIFDS+   G    V  +  LL               F+     G+ P+  
Sbjct: 270 KHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRH 329

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  Y       ++  + + M   G +P++ TF+ ++++ C+ GRL +A+E  + M
Sbjct: 330 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 389

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD-VYTYTAVMDGFCKVGR 240
              G  P+   Y+CL++G C    + +A E++ ++ + G+ P  +  +T++++  CK GR
Sbjct: 390 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 449

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             E  ++++  I  G  PN++TFN+L +GYC  G   + VGLL  M+     PD  +Y+T
Sbjct: 450 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 509

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G  K G+I  A+++F++M+     +     N +L GL    ++ +  +  A ++F +
Sbjct: 510 LVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGL----FQARRTIV-AKEMFHE 564

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +        TY  V+  L +   TDEA + L     M      +TFN VI+A+   G+
Sbjct: 565 MIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGR 624

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
             +A  L   +  +  +P+  +Y ++IT L + E   DA  L+ +  K    P  +
Sbjct: 625 RQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSR 680



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 183/402 (45%), Gaps = 4/402 (0%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +F  + + G    V  +N L+       E + A   F +    G+ PN  T+S +I  
Sbjct: 138 LPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLING 197

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C   +  +A +V+  M   G  PN  T+  L++    SG  KE++ V  +M      P+
Sbjct: 198 LCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPD 257

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           +   N  +  LC  GR++EA ++  ++   G KPDV +Y A++ G+   G       L N
Sbjct: 258 VGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFN 317

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             +  GV P+   FNTL N Y + G   K + + + M K+   PD I++ST+++   + G
Sbjct: 318 VMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLG 377

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A+  F  M+  G   D  + + L++G C      +DL++    + + ++K +    
Sbjct: 378 RLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQC----NRRDLVKAKELISDMLSKGIPPPC 433

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
              +  +I  L K  +  E    +   I  G  P  ITFN+++   C  G + +A+ LL 
Sbjct: 434 IKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLD 493

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
            M      P   +Y+ L+    +  +  DA  L+   L + V
Sbjct: 494 SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRV 535



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 148/321 (46%), Gaps = 5/321 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P + T+ IL+N   ++ R    L V  ++ R G  P++ +YN L+ G    G V++A+++
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              ++  G+ P+V TY+++++G CK    ++A  +L + +  GV PN +T+N L +GY  
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   + V + K M     +PD  + ++ +  L K G+I+ A  IF  MV  G + D   
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             +LL G     +     +     +F  M  +  V D   +  +I    +    D++L+ 
Sbjct: 296 YGALLHG-----YATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 350

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
                + G  P  ITF+ VI A C  G++D A+     M +    P    Y  LI     
Sbjct: 351 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 410

Query: 453 LEKSYDACALYGAALKQGVIP 473
                 A  L    L +G+ P
Sbjct: 411 RRDLVKAKELISDMLSKGIPP 431



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 175/393 (44%), Gaps = 41/393 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ + K G N  +  F+ ++ A   L   + A++ F+     G+ P++  +S +I+  C
Sbjct: 350 MFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQC 409

Query: 132 NKND----------------------FF--------------EARKVIDCMFDNGYHPNV 155
           N+ D                      FF              E + V+D +   G  PN+
Sbjct: 410 NRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNL 469

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
            TF  LV+  C  G +KEA+ +LD M  +G +P+I TYN L+ G C  GR+++A  +  +
Sbjct: 470 ITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRD 529

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           + +  +     +Y  ++ G  +  R+  A E+ +E IE G+  ++ T+ T+  G C+   
Sbjct: 530 MLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNC 589

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   LL+ +   N   D ++++ ++  + K G+ + A  +F  +  +G      +   
Sbjct: 590 TDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGL-----VPTI 644

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L   + + +  +++  EDA  +F  M K     D      +IR L    +  +A  +L  
Sbjct: 645 LTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSK 704

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             + G +P   T + +I      GK  + + LL
Sbjct: 705 IDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 737



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 16/307 (5%)

Query: 174 ALEVLDQMGRIGC---KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           A+E+  +M R  C    P I TYN L+       R +    +   +   GL PDV++Y A
Sbjct: 99  AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 158

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++DGF K G  ++A +L  +  E+G+ PNVVT+++L NG CK     K   +L+ M    
Sbjct: 159 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 218

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             P+ ++Y+ L++G    G  + +V +FKEM       D    NS +  LC     +   
Sbjct: 219 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALC-----KHGR 273

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTI 406
           +++A  +F+ M  K    D  +YG ++     G  T   +  + +   +    G +P   
Sbjct: 274 IKEARDIFDSMVLKGPKPDVISYGALLH----GYATAGCIAGMDNLFNVMVCEGVVPDRH 329

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
            FN +I A    G +DK+LL+   M +    P   ++  +I+   +L +  DA   +   
Sbjct: 330 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 389

Query: 467 LKQGVIP 473
           +  GV P
Sbjct: 390 IDTGVPP 396



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/298 (21%), Positives = 121/298 (40%), Gaps = 35/298 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  D+ D I   G   ++  FN L+    ++   + AV       S G+ P+ +
Sbjct: 446 KEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIY 505

Query: 122 TFSIMIRCYCNK-----------------------------NDFFEARKVIDC------M 146
           T++ ++  YC                               +  F+AR+ I        M
Sbjct: 506 TYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 565

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            ++G   ++ T+  ++  LC++    EA  +L+++  +  K +I T+N +++ +  VGR 
Sbjct: 566 IESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRR 625

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA E+   +   GL P + TY  ++    K     +A  L +   +   TP+    N +
Sbjct: 626 QEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEI 685

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
                 +G   K    L  + K+  LP+  + S L+      GK R  + +  E  RF
Sbjct: 686 IRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRF 743


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 223/479 (46%), Gaps = 68/479 (14%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K+   +E ++++  +  DG   SV  ++ L++A     + ET +    E  ++G+ PN 
Sbjct: 250 VKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNV 309

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           ++++I IR       F EA +++  M + G  P+V T T+L+  LC +GR+ +A +V  +
Sbjct: 310 YSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWK 369

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M +   KP+  TY  LL      G  +   E+   +K DG   +V  YTAV+D  C+VGR
Sbjct: 370 MKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 429

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNG------------------------------- 269
             EA+E+ +E  ++G+ P   ++N+L +G                               
Sbjct: 430 VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVL 489

Query: 270 ----YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
               Y K G  +K +   +LMK +  +PD ++ + +L GL K G++  A  +F E+   G
Sbjct: 490 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 549

Query: 326 FEVDERMMNSLLRGLCMKS--WEEK-----DLLE------------------------DA 354
              D      +++  C K+  ++E      D++E                        +A
Sbjct: 550 VSPDTITYTMMIK-CCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEA 608

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           +Q+F ++ +       GTY  ++  LG+  K  E +  L       + P  IT+N ++  
Sbjct: 609 WQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 668

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LC  G ++ AL +L+ M     IP  +SY+ +I  L + E+  +A +++   +K+ +IP
Sbjct: 669 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF-CQMKKVLIP 726



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 180/388 (46%), Gaps = 5/388 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +K+ G   +   +N L+  LV       A++ +      G+ P+  T+S+++  +  + D
Sbjct: 230 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRD 289

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
                 ++  M  +G  PNV ++TI +  L ++ R  EA  +L +M   GCKP++ T+  
Sbjct: 290 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTV 349

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L++ LC  GR+ +A ++   +K    KPD  TY  ++D F   G S   ME+ N     G
Sbjct: 350 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADG 409

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
              NVV +  + +  C+ G   + + +   MK++  +P++ SY++L++G LK  +   A+
Sbjct: 410 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 469

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +FK M     ++     N     L +  + +      A Q +E M  K  V D      
Sbjct: 470 ELFKYM-----DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA 524

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           V+  L K  +   A    H    MG  P TIT+  +I+      K D+A+ + + M E+ 
Sbjct: 525 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 584

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALY 463
            +P     + LI  L +  +  +A  ++
Sbjct: 585 CVPDVLVVNSLIDTLYKAGRGDEAWQIF 612



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 150/313 (47%), Gaps = 5/313 (1%)

Query: 161  LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
            L+  LCK  +  EA E++ +    G      +YN L+ GL     ++ A  +   +K  G
Sbjct: 805  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELG 864

Query: 221  LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
              PD +TY  ++D   K  R  E +++  E   +G     VT+NT+ +G  K     + +
Sbjct: 865  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 924

Query: 281  GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
             L   +  +   P   +Y  LL+GLLK G+I  A ++F EM+ +G + +  + N LL G 
Sbjct: 925  DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 984

Query: 341  CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
             +    EK        +F+ M  +    D  +Y I+I TL K  + ++ L +    +EMG
Sbjct: 985  RIAGNTEK-----VCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMG 1039

Query: 401  HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
              P  IT+N +I  L    ++++A+ L   M +   +P+  +Y+ LI  L +  K+ +A 
Sbjct: 1040 LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAG 1099

Query: 461  ALYGAALKQGVIP 473
             +Y   L +G  P
Sbjct: 1100 KMYEELLTKGWKP 1112



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 186/410 (45%), Gaps = 7/410 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KAS   E + IF  + ++     V   N L+  L      + A + F +     L P   
Sbjct: 566 KASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDG 625

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++     +    E   +++ M+ + Y PN+ T+  +++ LCK+G + +AL++L  M
Sbjct: 626 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 685

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P++ +YN ++ GL    R  EA+ +   +K   L PD  T   ++  F K+G  
Sbjct: 686 TTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLM 744

Query: 242 NEAMELLNEA-IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            EA+ ++ E  ++ G   +  + ++L  G  K+    K +   +++       D      
Sbjct: 745 KEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCP 804

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+  L K  K   A  + K+   FG  +     NSL+ GL      +++L++ A  +F +
Sbjct: 805 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLV-----DENLIDIAEGLFAE 859

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +     D  TY +++  +GK  + +E L         G+    +T+N +I  L    +
Sbjct: 860 MKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR 919

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +++A+ L + +      P+  +Y  L+  L +  +  DA  L+   L+ G
Sbjct: 920 LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 969



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 150/329 (45%), Gaps = 40/329 (12%)

Query: 68   ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
            E  ++    K  G +     +N L+  LV  N  + A   F+E    G  P+ +T+++++
Sbjct: 817  EAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 876

Query: 128  RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV---------- 177
                      E  KV + M   GY     T+  +++ L KS RL++A+++          
Sbjct: 877  DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 936

Query: 178  ------------LDQMGRI-------------GCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
                        L + GRI             GCK N   YN LL G    G  E+   +
Sbjct: 937  PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHL 996

Query: 213  LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              ++ + G+ PD+ +YT ++D  CK G+ N+ +    + +E G+ P+++T+N L +G  K
Sbjct: 997  FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGK 1056

Query: 273  EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                 + V L   M+K+  +P+  +Y++L+  L K GK   A  +++E++  G++ +   
Sbjct: 1057 SKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFT 1116

Query: 333  MNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
             N+L+RG     +      + AY  + +M
Sbjct: 1117 YNALIRG-----YSVSGSTDSAYAAYGRM 1140



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 183/437 (41%), Gaps = 44/437 (10%)

Query: 61   IKASPLKERIDIF-DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
            +K   +KE + I  +   + G+    S  + L+  ++     E +++F    +S G+  +
Sbjct: 739  VKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLD 798

Query: 120  SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             +    +I+  C +    EA +++      G      ++  L+  L     +  A  +  
Sbjct: 799  DFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFA 858

Query: 180  QMGRIGCKPN----------------------IQ-------------TYNCLLKGLCYVG 204
            +M  +GC P+                      +Q             TYN ++ GL    
Sbjct: 859  EMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSR 918

Query: 205  RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            R+E+A ++  N+ + G  P   TY  ++DG  K GR  +A  L NE +E G   N   +N
Sbjct: 919  RLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYN 978

Query: 265  TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
             L NG+   G   K   L + M  +   PD  SY+ +++ L K G++   ++ F++++  
Sbjct: 979  ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM 1038

Query: 325  GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
            G E D    N L+ GL      +   LE+A  +F +M KK  V +  TY  +I  LGK  
Sbjct: 1039 GLEPDLITYNLLIDGL-----GKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAG 1093

Query: 385  KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS-- 442
            K  EA       +  G  P   T+N +I+     G  D A      M     +P+ ++  
Sbjct: 1094 KAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCH 1153

Query: 443  -YDMLITKLDQLEKSYD 458
             ++++ T L     SY+
Sbjct: 1154 IHELMKTFLKGDSDSYE 1170



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 153/323 (47%), Gaps = 6/323 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E +++FD +K+ G       +N L+   +  +    A++ F     +G  PN +T  + I
Sbjct: 432 EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFI 491

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             Y    +  +A +  + M   G  P+V     ++  L KSGRL  A  V  ++  +G  
Sbjct: 492 NYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 551

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TY  ++K      + +EA ++  ++  +   PDV    +++D   K GR +EA ++
Sbjct: 552 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQI 611

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             +  E  + P   T+NTL  G  +EG   + + LL+ M   N  P+ I+Y+T+L+ L K
Sbjct: 612 FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 671

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G +  A+ +   M   G   D    N+++ GL      +++   +A+ +F +M KKV +
Sbjct: 672 NGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV-----KEERYNEAFSIFCQM-KKVLI 725

Query: 368 TDPGTYGIVIRTLGKGKKTDEAL 390
            D  T   ++ +  K     EAL
Sbjct: 726 PDYATLCTILPSFVKIGLMKEAL 748



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 128/287 (44%), Gaps = 1/287 (0%)

Query: 40   AESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVML 98
            AE  +L   P        +D + K+  ++E + + + + + G   +   +N ++  LV  
Sbjct: 858  AEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKS 917

Query: 99   NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
               E A+  +    S G +P   T+  ++          +A  + + M + G   N T +
Sbjct: 918  RRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIY 977

Query: 159  TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
             IL+N    +G  ++   +   M   G  P+I++Y  ++  LC  G++ +       +  
Sbjct: 978  NILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLE 1037

Query: 219  DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
             GL+PD+ TY  ++DG  K  R  EA+ L NE  ++G+ PN+ T+N+L     K G   +
Sbjct: 1038 MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1097

Query: 279  GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
               + + +  +   P+  +Y+ L+ G    G    A + +  M+  G
Sbjct: 1098 AGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGG 1144



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 136/296 (45%), Gaps = 7/296 (2%)

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           GR+ +  EV D M R   K N+ T+  +  GL   G +  A   L  +K  G+  + YTY
Sbjct: 183 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 242

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
             ++    K G   EA+E+    +  GV P+V T++ L   + K       + LL+ M+ 
Sbjct: 243 NGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 302

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
               P+  SY+  +  L +  +   A  I  EM   G + D      L++ LC     + 
Sbjct: 303 HGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLC-----DA 357

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-GHIPRTIT 407
             + DA  VF KM K     D  TY  ++       ++ ++++ + +A++  G+    + 
Sbjct: 358 GRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGES-QSVMEIWNAMKADGYNDNVVA 416

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +  VI ALC  G++ +AL +   M +   +P + SY+ LI+   + ++  DA  L+
Sbjct: 417 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 472



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 134/333 (40%), Gaps = 5/333 (1%)

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           +V D M       NV TF  +   L   G L+ A   L  M   G   N  TYN L+  L
Sbjct: 190 EVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFL 249

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
              G   EA E+   +  DG+ P V TY+ +M  F K       + LL E    GV PNV
Sbjct: 250 VKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNV 309

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            ++        +     +   +L  M+   C PD I+++ L+  L   G+I  A  +F +
Sbjct: 310 YSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWK 369

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M +   + D     +LL      + E + ++E    ++  M       +   Y  VI  L
Sbjct: 370 MKKSDQKPDRVTYITLLDKFA-DNGESQSVME----IWNAMKADGYNDNVVAYTAVIDAL 424

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            +  +  EAL       + G +P   ++N++I       +   AL L   M  H   P+ 
Sbjct: 425 CQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNG 484

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++ + I    +  +S  A   Y     +G++P
Sbjct: 485 YTHVLFINYYGKSGESIKAIQRYELMKSKGIVP 517


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 205/403 (50%), Gaps = 5/403 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  +   G   S+   N LL +LV  NE + + + F      G+ P+ + FS M+  +
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A ++   M   G  PNV T+  +++ LCK+GRL EA +  ++M +   KP++
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  L+ GL  + R +EA  +L  + + G  P+   Y  ++DG+C++G  + A+++ ++
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            I  G++PN VT N+L  GYCK         LL+ M     + ++ +++++++ L    +
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCR 387

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
              A+    EM+   F+ ++ ++  L+ GLC ++ ++ + +E  Y++ EK     +VT  
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGLLTLLVSGLC-QNGKQSEAIELWYRLLEKGFAANTVTSN 446

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
                +I  L +    +EA   L   +E G +  +I++N +I A C EGK+++   L   
Sbjct: 447 A----LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEE 502

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M      P   +Y+ML+  L  + K  +A  L+    K G  P
Sbjct: 503 MVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFP 545



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 186/412 (45%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E     + ++K+    S+  +  L+  LV L   + A     E S  G APN+ 
Sbjct: 244 KNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNV 303

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  YC   +   A ++ D M  NG  PN  T   L+   CKS +++ A  +L++M
Sbjct: 304 VYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEM 363

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   N  T+  ++  LC   R + A   +M +     KP+    T ++ G C+ G+ 
Sbjct: 364 LTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQ 423

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA+EL    +E+G   N VT N L +G C+ G+  +   LLK M +R  + D ISY+TL
Sbjct: 424 SEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTL 483

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +    K GK+     + +EMVR G + D    N LL GLC         +E+A  ++ + 
Sbjct: 484 ILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLC-----NMGKIEEAGGLWHEC 538

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K  +  D  TYGI+I    K  + +E        + M      + +  +I+A C  G +
Sbjct: 539 KKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNM 598

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +A  L   M       +  +Y  LI  L  +     A  L     K+G+ P
Sbjct: 599 REAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSP 650



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 166/357 (46%), Gaps = 5/357 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  L    +Q  A++ +      G A N+ T + +I   C      EA K++  M + G
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERG 472

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +  ++  L+ + CK G+++E  ++ ++M R G +P++ TYN LL GLC +G++EEA 
Sbjct: 473 LVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAG 532

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +    K +G  PD YTY  ++DG+CK  R  E  +L  E +   +  N V + TL   Y
Sbjct: 533 GLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAY 592

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+ G   +   L   M+ R       +YS+L++GL   G +  A  +  EM + G   + 
Sbjct: 593 CENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNV 652

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +L+ G C      K        + ++M+      +  TY I+I    K      A 
Sbjct: 653 VCYTALIGGYCKLGQMHK-----VDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAA 707

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             L+   + G +P  +T+N +    C EGK+++AL +  LM          +Y  LI
Sbjct: 708 KLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 139/278 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E   + + + + G    +  +N LL  L  + + E A   + E    G  P+++
Sbjct: 489 KEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAY 548

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ IMI  YC  N   E  K+   M       N   +  L+ + C++G ++EA  + D M
Sbjct: 549 TYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDM 608

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G      TY+ L+ GL  +G V+ A ++L  ++ +GL P+V  YTA++ G+CK+G+ 
Sbjct: 609 RSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQM 668

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++   +L E     V PN +T+  + NG+CK G       LL  M ++  +PD ++Y+ L
Sbjct: 669 HKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNAL 728

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
            NG  K GK+  A+ +   M   G  +D+    +L+ G
Sbjct: 729 TNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 181/387 (46%), Gaps = 5/387 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA+ +K    +FD +   G    V  F+ ++ A       + A++ F +    G+APN 
Sbjct: 173 VKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNV 232

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I   C      EA +  + M      P++ T+ +L+N L K  R  EA  +L +
Sbjct: 233 VTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKE 292

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  PN   YN L+ G C +G +  A ++  ++ ++G+ P+  T  +++ G+CK  +
Sbjct: 293 MSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQ 352

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A  LL E +  G   N  TF ++ +  C +      +  +  M  RN  P+    + 
Sbjct: 353 MEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTL 412

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL + GK   A+ ++  ++  GF  +    N+L+ GLC     E    E+A ++ ++
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLC-----EAGSKEEAAKLLKE 467

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++  V D  +Y  +I    K  K +E        +  G  P   T+N ++  LC  GK
Sbjct: 468 MLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGK 527

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
           I++A  L     ++   P   +Y ++I
Sbjct: 528 IEEAGGLWHECKKNGNFPDAYTYGIMI 554



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 157/345 (45%), Gaps = 40/345 (11%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E I+++  + + G   +    N L+  L     +E A K   E    GL  +S +++ +I
Sbjct: 425 EAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLI 484

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    E  K+ + M   G  P++ T+ +L++ LC  G+++EA  +  +  + G  
Sbjct: 485 LACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNF 544

Query: 188 PNIQTYNCLLKGLCYVGRVE-----------------------------------EAYEM 212
           P+  TY  ++ G C   RVE                                   EA+ +
Sbjct: 545 PDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRL 604

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
             ++++ G+     TY++++ G   +G  + A +LL+E  + G++PNVV +  L  GYCK
Sbjct: 605 RDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCK 664

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   K   +L+ M   N  P+KI+Y+ ++NG  K G ++ A  +  EM + G   D   
Sbjct: 665 LGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVT 724

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
            N+L  G C     ++  +E+A +V + M+      D  TY  +I
Sbjct: 725 YNALTNGFC-----KEGKMEEALKVCDLMSTGGISLDDITYTTLI 764



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 90/172 (52%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   + D ++  G   + + ++ L+  L  +   ++A +   E    GL+PN   ++ 
Sbjct: 598 MREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTA 657

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC      +   ++  M  N  HPN  T+TI++N  CK G +K A ++L++M + G
Sbjct: 658 LIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKG 717

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
             P+  TYN L  G C  G++EEA ++   +   G+  D  TYT ++DG+ K
Sbjct: 718 IVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 102/211 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA+ ++E   +F  +       +   +  L+ A         A +   +  S G+   S 
Sbjct: 559 KANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSA 618

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I    N      A +++D M   G  PNV  +T L+   CK G++ +   +L +M
Sbjct: 619 TYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEM 678

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 PN  TY  ++ G C +G ++ A ++L  +   G+ PD  TY A+ +GFCK G+ 
Sbjct: 679 SINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKM 738

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
            EA+++ +     G++ + +T+ TL +G+ K
Sbjct: 739 EEALKVCDLMSTGGISLDDITYTTLIDGWHK 769



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 47/270 (17%)

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           I  Y+   K L + G V E + +L    N GL P + T   ++    K      + ++ +
Sbjct: 131 IHVYSTQFKHLGF-GVVFELFSLL---ANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFD 186

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
                GVTP+V  F+T+ N +C  G     + L + M+K    P+ ++Y+ +++GL K G
Sbjct: 187 IMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNG 246

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           +                                        L++A+Q  EKM K+     
Sbjct: 247 R----------------------------------------LDEAFQFKEKMEKERVKPS 266

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TYG++I  L K ++ DEA   L    + G+ P  + +N +I   C  G I  AL +  
Sbjct: 267 LVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRD 326

Query: 430 LMYEHAKIPSRTSYDMLIT---KLDQLEKS 456
            M  +   P+  + + LI    K +Q+E +
Sbjct: 327 DMISNGISPNSVTCNSLIQGYCKSNQMEHA 356


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 196/401 (48%), Gaps = 10/401 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD ++ DG     S    L+ +   + + ++A  F +E   YG+  + + ++ ++    
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLV 190

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +N   EA  +     +  + P+V +F IL+  LC+ G + +A E    MG  GC P+I 
Sbjct: 191 KQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIV 250

Query: 192 TYNCLLKGLCYVGRVEEAYEML---MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           +YN L+ G C V  + + +++L   M +K  G+ PDV TYT+++ G+CK+G    A EL 
Sbjct: 251 SYNTLINGFCRVNEISKGHDLLKEDMLIK--GVSPDVITYTSIISGYCKLGDMKAASELF 308

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +E +  G+ PN  TFN L +G+ K G     + + + M    CLPD +++++L++G  + 
Sbjct: 309 DEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCRE 368

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G++   + +++EM       +      L+  LC     +++ + +A      +     V 
Sbjct: 369 GEVNQGLKLWEEMKVRNLSPNVYTYAVLINALC-----KENRIREARNFLRHLKSSEVVP 423

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            P  Y  VI    K  K DEA   +    E    P  ITF  +I   C +G++ +A+   
Sbjct: 424 KPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTF 483

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           + M E   +P   + + LI+ L +     +A  +  AAL++
Sbjct: 484 YKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 175/377 (46%), Gaps = 34/377 (9%)

Query: 104 AVKFFSEASSYGLAPNSW--TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
            +KFF E S   L+ N    T+ +++R  C       A+ V DCM  +G  P+ +   +L
Sbjct: 92  GLKFF-EFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELL 150

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           V+S  + G+L  A   L+++   G K +   YN LL  L     V+EA  +         
Sbjct: 151 VSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYF 210

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PDVY++  ++ G C++G  ++A E        G  P++V++NTL NG+C+     KG  
Sbjct: 211 VPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD 270

Query: 282 LLKL-MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           LLK  M  +   PD I+Y+++++G  K G ++ A  +F EMV  G + ++   N L+ G 
Sbjct: 271 LLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGF 330

Query: 341 --------CMKSWEEKDLLE------------DAY----------QVFEKMTKKVSVTDP 370
                    M  +E+  LL             D Y          +++E+M  +    + 
Sbjct: 331 GKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNV 390

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY ++I  L K  +  EA   L H      +P+   +N VI   C  GK+D+A  ++  
Sbjct: 391 YTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAE 450

Query: 431 MYEHAKIPSRTSYDMLI 447
           M E    P + ++ +LI
Sbjct: 451 MQEKKCRPDKITFTILI 467



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 103/215 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K   ++FD +   G   +   FN L+     +    +A+  + +    G  P+  
Sbjct: 297 KLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVV 356

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  YC + +  +  K+ + M      PNV T+ +L+N+LCK  R++EA   L  +
Sbjct: 357 TFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHL 416

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P    YN ++ G C  G+V+EA  ++  ++    +PD  T+T ++ G C  GR 
Sbjct: 417 KSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRM 476

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            EA+    + IE    P+ +T N+L +   K G P
Sbjct: 477 VEAISTFYKMIEINCVPDEITINSLISCLLKAGMP 511


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 157/284 (55%), Gaps = 8/284 (2%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           DR+ A+    R  I ++ K+D     V+ +N L+ AL  L   + A+  F++ +  G  P
Sbjct: 96  DRLDAA----RAVIAEARKRDFAPDVVT-YNTLMAALFQLGRVDEALATFTQMTEEGYVP 150

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
              +F+ +I   C      +A +V + M D  +HPN+ T++++++ LCKS +L EA ++L
Sbjct: 151 TLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 210

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D+M   GC+P++  Y  L+ G    GR++ A  +L  + + G  PDV TYT V+D  CKV
Sbjct: 211 DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 270

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           GR ++A E+  E +    +PNVVT++ L  GYC+     +G    K+M++  C P+ ++Y
Sbjct: 271 GRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGG---KVMREMACRPNVVTY 327

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           +T++ GL    +   A  +F+EM   GF  D R    L R L M
Sbjct: 328 NTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRM 371



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 175/356 (49%), Gaps = 10/356 (2%)

Query: 62  KASPLKERIDIFD-SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPN 119
           +   + + ++ FD S++       V  +  L+  L  L   + A   F +  ++ G  PN
Sbjct: 22  RCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPN 81

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           ++T++ ++   C ++    AR VI       + P+V T+  L+ +L + GR+ EAL    
Sbjct: 82  AFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFT 141

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           QM   G  P + ++N ++ GLC   R+ +A E+   + +    P++ TY+ V+DG CK  
Sbjct: 142 QMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSD 201

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           + +EA +LL+  +  G  P++V +  L  G+   G     +GLL+ M  + C+PD ++Y+
Sbjct: 202 QLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYT 261

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            +++ L K G++  A  IF+E+V      +    ++L+ G C  S      +++  +V  
Sbjct: 262 VVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASR-----VDEGGKVMR 316

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           +M  + +V    TY  +I  L    + +EA        E G +P   T+  + +AL
Sbjct: 317 EMACRPNVV---TYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 152/300 (50%), Gaps = 7/300 (2%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG-CKPNIQTYNCLLKGLCYVGRVEE 208
           G   N  T +I++  LC+ GR+ +ALE  D    +   +P++ +Y  L+ GLC +GRV+ 
Sbjct: 5   GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64

Query: 209 AYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           A+++    V   G +P+ +TY A++DG CK  R + A  ++ EA +R   P+VVT+NTL 
Sbjct: 65  AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
               + G   + +     M +   +P  +S++ ++ GL +  ++  A+ +F EM+   F 
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 184

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +    + ++ GLC     + D L++A Q+ ++M  +    D   Y  ++       + D
Sbjct: 185 PNLVTYSVVIDGLC-----KSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLD 239

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            AL  L   +  G IP  +T+  VI  LC  G++D A  +   +  +   P+  +Y  LI
Sbjct: 240 SALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALI 299



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 142/277 (51%), Gaps = 7/277 (2%)

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEML-MNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
           G + N +T + +L+GLC  GRV +A E    +++    +PDV +YT +++G CK+GR + 
Sbjct: 5   GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64

Query: 244 AMELLNEAIERG-VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           A +L  + +  G   PN  T+N L +G CK+        ++   +KR+  PD ++Y+TL+
Sbjct: 65  AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
             L + G++  A++ F +M   G+       N+++ GLC         L DA +VF +M 
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARR-----LADALEVFNEMI 179

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            +    +  TY +VI  L K  + DEA   L   +  G  P  + +  ++      G++D
Sbjct: 180 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLD 239

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
            AL LL  M     IP   +Y ++I KL ++ +  DA
Sbjct: 240 SALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDA 276



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 7/257 (2%)

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG-VTPNVVTFNTLFNGYCKEGTPM 277
           +G++ +  T + ++ G C+ GR  +A+E  + ++E     P+VV++ TL NG CK G   
Sbjct: 4   EGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVD 63

Query: 278 KGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
               L  K++    C P+  +Y+ L++GL K  ++  A ++  E  +  F  D    N+L
Sbjct: 64  AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
                M +  +   +++A   F +MT++  V    ++  +I  L + ++  +AL   +  
Sbjct: 124 -----MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEM 178

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           I+    P  +T++ VI  LC   ++D+A  LL  M      P   +Y  L+       + 
Sbjct: 179 IDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRL 238

Query: 457 YDACALYGAALKQGVIP 473
             A  L    + QG IP
Sbjct: 239 DSALGLLRRMVSQGCIP 255


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 201/415 (48%), Gaps = 8/415 (1%)

Query: 37  LSTAESLDLKENPRSLQ-AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMAL 95
           L   ESL L+ N  +     R + R  A  + E   I   +   G    V  +  L+ AL
Sbjct: 250 LQEMESLGLRPNIYTFTICIRILGR--AGKIDEAYGILKRMDDAGCGPDVVTYTVLIDAL 307

Query: 96  VMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV 155
               +   A + F +  +    P+  T+  ++  + +  D    ++    M  +GY P+V
Sbjct: 308 CNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDV 367

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
            TFTIL+++LCK G++ EA   LD M + G  PN+ TYN L+ GL  + R++EA E+  +
Sbjct: 368 VTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNS 427

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +++ GL+   YTY   +D + K G S +A++   +    G+ PN+V  N       ++G 
Sbjct: 428 MESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGR 487

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +       +KK    PD I+Y+ L+    K G++  A+ +  EM   G + +  ++NS
Sbjct: 488 LEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINS 547

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+  L      + D +++A+++F++M +        TY  ++  LGK  +  EA      
Sbjct: 548 LIDTL-----YKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKG 602

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            I     P TI+FN ++  LC  G++D AL +LF M E    P   +Y+ +I  L
Sbjct: 603 MIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGL 657



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 206/443 (46%), Gaps = 19/443 (4%)

Query: 45  LKENPRSLQAQRFVDRI--------------KASPLKERIDIFDSIKKDGTNWSVSDFND 90
           L+E P +L+  R V  +              K+   +E + ++  +  +G   S+  ++ 
Sbjct: 173 LREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSA 232

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L++AL    + ET +    E  S GL PN +TF+I IR         EA  ++  M D G
Sbjct: 233 LMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAG 292

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             P+V T+T+L+++LC +G+L  A E+  +M     KP+  TY  LL      G ++   
Sbjct: 293 CGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIK 352

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E    ++ DG  PDV T+T ++D  CKVG+ +EA   L+   ++GV PN+ T+NTL  G 
Sbjct: 353 EFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGL 412

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
            +     + + L   M+         +Y   ++   K G+   A+  F++M   G   + 
Sbjct: 413 LRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNI 472

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N+ L  L      E+  LE+A + F  + K     D  TY I++R  GK  + D+A+
Sbjct: 473 VACNASLYSLA-----EQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAI 527

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             L    E G  P  +  N++I  L    ++D+A  +   M E    P+  +Y+ L+  L
Sbjct: 528 KLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGL 587

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +  +  +A AL+   +     P
Sbjct: 588 GKEGRVQEATALFKGMIADDCPP 610



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 212/523 (40%), Gaps = 104/523 (19%)

Query: 57  FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           F+D   K+    + I  F+ +K +G   ++   N  L +L      E A +FF+     G
Sbjct: 443 FIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCG 502

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           LAP++ T++I++RCY       +A K++  M +NG  P V     L+++L K+ R+ EA 
Sbjct: 503 LAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAW 562

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           ++  +M  +   P + TYN LL GL   GRV+EA  +   +  D   P+  ++  ++D  
Sbjct: 563 KMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCL 622

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK G  + A+++L    E    P+V+T+NT+  G  KE        L   MKK    PD 
Sbjct: 623 CKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDY 681

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVR-FGFEVDERMMNSLLRGLCMKSWEEKDLL--- 351
           ++  TLL G++K G+I  A  + KE V   G   D      L+ G+ +++   + +L   
Sbjct: 682 VTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAE 741

Query: 352 ---------------------------EDAYQVFEKMTKKVSVT---------------- 368
                                       DAY VF K+TK   +T                
Sbjct: 742 SLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKA 801

Query: 369 --------------------DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
                               D  TY + +  LGK  K  E        +  G  P TIT 
Sbjct: 802 RLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITH 861

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT---KLDQLEKSYD------- 458
           N VI  L     +DKA+ L + +      P+  +Y  LI    KL +LE++         
Sbjct: 862 NIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLD 921

Query: 459 -------------------------ACALYGAALKQGVIPQRK 476
                                    AC L+   +K+G+ P  K
Sbjct: 922 YGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLK 964



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 153/304 (50%), Gaps = 5/304 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E     D +KK G   ++  +N L+  L+ LN  + A++ F+   S GL   ++
Sbjct: 379 KVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAY 438

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ + I  Y    +  +A K  + M  NG  PN+      + SL + GRL+EA E  + +
Sbjct: 439 TYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGL 498

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P+  TYN L++     GRV++A ++L  ++ +G  P+V    +++D   K  R 
Sbjct: 499 KKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRV 558

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA ++     E  + P VVT+NTL  G  KEG   +   L K M   +C P+ IS++TL
Sbjct: 559 DEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTL 618

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+ L K G++  A+ +   M       D    N+++ GL      +++ +  A+ +F +M
Sbjct: 619 LDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLI-----KENRVNYAFWLFHQM 673

Query: 362 TKKV 365
            K +
Sbjct: 674 KKVI 677



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 147/314 (46%), Gaps = 6/314 (1%)

Query: 161  LVNSLCKSGRLKEALEVLDQMGRIGC-KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            LV  LCK G+  +A  V  ++ +  C  P+++ YN L+ GL      E A+ +   +KN 
Sbjct: 758  LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817

Query: 220  GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            G  PDV+TY   +D   K G+  E  +L  E + RG  PN +T N +  G  K  +  K 
Sbjct: 818  GCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKA 877

Query: 280  VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
            + L   +   +  P   +Y  L++GLLK G++  A   F+EM+ +G      M N  L  
Sbjct: 878  IDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGC-----MPNCPLYN 932

Query: 340  LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
            + M  + ++  +E A ++F +M K+    D  +Y I++  L    K D+AL +       
Sbjct: 933  ILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLS 992

Query: 400  GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
            G  P  + +N +I  L    ++++AL L   M      P   +Y+ LI  L       +A
Sbjct: 993  GLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEA 1052

Query: 460  CALYGAALKQGVIP 473
              +Y     +G+ P
Sbjct: 1053 GKMYEELQLKGLEP 1066



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 125/243 (51%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            +K++ L + ID++  +     + +   +  L+  L+ L   E A +FF E   YG  PN 
Sbjct: 869  VKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNC 928

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
              ++I++  +  + D   A ++   M   G  P++ +++I+V+ LC  G++ +AL   ++
Sbjct: 929  PLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEE 988

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            +   G  P++  YN ++ GL    RVEEA  +   ++N G+ PD+YTY A++      G 
Sbjct: 989  LKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGM 1048

Query: 241  SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              EA ++  E   +G+ PNV T+N L  G+   G P +   + K M    C P+  +++ 
Sbjct: 1049 VEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQ 1108

Query: 301  LLN 303
            L N
Sbjct: 1109 LPN 1111



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 144/306 (47%), Gaps = 11/306 (3%)

Query: 72   IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
            +F  +K  G    V  +N  L AL    + +     + E    G  PN+ T +I+I    
Sbjct: 810  LFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLV 869

Query: 132  NKNDFFEARKVIDCMFD---NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
              N      K ID  +D     + P   T+  L++ L K GRL+EA +  ++M   GC P
Sbjct: 870  KSNSL---DKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMP 926

Query: 189  NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
            N   YN L+ G    G VE A E+   +  +G++PD+ +Y+ ++D  C VG+ ++A+   
Sbjct: 927  NCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYF 986

Query: 249  NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
             E    G+ P++V +N + NG  +     + + L   M+ R   PD  +Y+ L+  L   
Sbjct: 987  EELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIA 1046

Query: 309  GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
            G +  A  +++E+   G E +    N+L+RG  M    ++     AY V++KM       
Sbjct: 1047 GMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDR-----AYAVYKKMMVGGCRP 1101

Query: 369  DPGTYG 374
            + GT+ 
Sbjct: 1102 NTGTFA 1107



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 137/278 (49%), Gaps = 1/278 (0%)

Query: 49   PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
            P       F+D + K+  +KE  D+++ +   G   +    N ++  LV  N  + A+  
Sbjct: 821  PDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDL 880

Query: 108  FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            + +  S   +P  WT+  +I          EA++  + M D G  PN   + IL+N   K
Sbjct: 881  YYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGK 940

Query: 168  SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
             G ++ A E+  +M + G +P++++Y+ ++  LC VG+V++A      +K  GL PD+  
Sbjct: 941  QGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVC 1000

Query: 228  YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
            Y  +++G  +  R  EA+ L +E   RG+TP++ T+N L       G   +   + + ++
Sbjct: 1001 YNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQ 1060

Query: 288  KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
             +   P+  +Y+ L+ G    G    A +++K+M+  G
Sbjct: 1061 LKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGG 1098



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 146/325 (44%), Gaps = 5/325 (1%)

Query: 84   SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
            S+  +N L+  L+     E A   F +  + G  P+ +T+++ +          E   + 
Sbjct: 787  SLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLY 846

Query: 144  DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
            + M   G  PN  T  I++  L KS  L +A+++   +      P   TY  L+ GL  +
Sbjct: 847  EEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKL 906

Query: 204  GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            GR+EEA +    + + G  P+   Y  +M+GF K G    A EL    ++ G+ P++ ++
Sbjct: 907  GRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSY 966

Query: 264  NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
            + + +  C  G     +   + +K     PD + Y+ ++NGL +  ++  A+S+F EM  
Sbjct: 967  SIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRN 1026

Query: 324  FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
             G   D    N+L+  L +       ++E+A +++E++  K    +  TY  +IR     
Sbjct: 1027 RGITPDLYTYNALILNLGIAG-----MVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMS 1081

Query: 384  KKTDEALIHLHHAIEMGHIPRTITF 408
               D A       +  G  P T TF
Sbjct: 1082 GNPDRAYAVYKKMMVGGCRPNTGTF 1106



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 17/327 (5%)

Query: 153  PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
            P++  +  L++ L K+   + A  +  +M   GC P++ TYN  L  L   G+++E +++
Sbjct: 786  PSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDL 845

Query: 213  LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
               +   G KP+  T+  V+ G  K    ++A++L  + +    +P   T+  L +G  K
Sbjct: 846  YEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLK 905

Query: 273  EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
             G   +     + M    C+P+   Y+ L+NG  K G +  A  +F+ MV+ G   D + 
Sbjct: 906  LGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKS 965

Query: 333  MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEAL 390
             + ++  LCM        ++DA   FE++  K+S  DP    Y ++I  LG+ ++ +EAL
Sbjct: 966  YSIMVDCLCMVGK-----VDDALHYFEEL--KLSGLDPDLVCYNLMINGLGRSQRVEEAL 1018

Query: 391  IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI----PSRTSYDML 446
                     G  P   T+N +I  L   G +++A      MYE  ++    P+  +Y+ L
Sbjct: 1019 SLFDEMRNRGITPDLYTYNALILNLGIAGMVEEA----GKMYEELQLKGLEPNVFTYNAL 1074

Query: 447  ITKLDQLEKSYDACALYGAALKQGVIP 473
            I           A A+Y   +  G  P
Sbjct: 1075 IRGHSMSGNPDRAYAVYKKMMVGGCRP 1101



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 135/303 (44%), Gaps = 7/303 (2%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           R+++ + V + M +   K +I TY  + K L   G + EA   L  ++  G   + Y+Y 
Sbjct: 137 RVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYI 196

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++    K G   EA+++    +  G+ P++ T++ L     K       +GLL+ M+  
Sbjct: 197 GLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESL 256

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P+  +++  +  L + GKI  A  I K M   G   D      L+  LC        
Sbjct: 257 GLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALC-----NAG 311

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-GHIPRTITF 408
            L +A ++F KM       D  TY  ++         D A+      +E  G++P  +TF
Sbjct: 312 KLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLD-AIKEFWSEMEADGYLPDVVTF 370

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
             +I ALC  GK+D+A   L +M +    P+  +Y+ LI  L +L +  +A  L+ +   
Sbjct: 371 TILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMES 430

Query: 469 QGV 471
            G+
Sbjct: 431 LGL 433


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 205/416 (49%), Gaps = 6/416 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE  DIFDS+   G    V  +  LL               F+     G+ P+  
Sbjct: 341 KHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRH 400

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  Y       ++  + + M   G +P++ TF+ ++++ C+ GRL +A+E  + M
Sbjct: 401 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 460

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD-VYTYTAVMDGFCKVGR 240
              G  P+   Y+CL++G C    + +A E++ ++ + G+ P  +  +T++++  CK GR
Sbjct: 461 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 520

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             E  ++++  I  G  PN++TFN+L +GYC  G   + VGLL  M+     PD  +Y+T
Sbjct: 521 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 580

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G  K G+I  A+++F++M+     +     N +L GL    ++ +  +  A ++F +
Sbjct: 581 LVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGL----FQARRTIV-AKEMFHE 635

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +        TY  V+  L +   TDEA + L     M      +TFN VI+A+   G+
Sbjct: 636 MIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGR 695

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
             +A  L   +  +  +P+  +Y ++IT L + E   DA  L+ +  K    P  +
Sbjct: 696 RQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSR 751



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 184/402 (45%), Gaps = 4/402 (0%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +F  + + G    V  +N L+       E + A   F +    G+ PN  T+S +I  
Sbjct: 209 LPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLING 268

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C   +  +A +V+  M   G  PN  T+  L++    SG  KE++ V  +M      P+
Sbjct: 269 LCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPD 328

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           +   N  +  LC  GR++EA ++  ++   G KPDV +Y A++ G+   G       L N
Sbjct: 329 VGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFN 388

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             +  GV P+   FNTL N Y + G   K + + + M K+   PD I++ST+++   + G
Sbjct: 389 VMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLG 448

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A+  F  M+  G   D  + + L++G C +    +DL++    + + ++K +    
Sbjct: 449 RLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR----RDLVKAKELISDMLSKGIPPPC 504

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
              +  +I  L K  +  E    +   I  G  P  ITFN+++   C  G + +A+ LL 
Sbjct: 505 IKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLD 564

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
            M      P   +Y+ L+    +  +  DA  L+   L + V
Sbjct: 565 SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRV 606



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 148/321 (46%), Gaps = 5/321 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P + T+ IL+N   ++ R    L V  ++ R G  P++ +YN L+ G    G V++A+++
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              ++  G+ P+V TY+++++G CK    ++A  +L + +  GV PN +T+N L +GY  
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   + V + K M     +PD  + ++ +  L K G+I+ A  IF  MV  G + D   
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             +LL G     +     +     +F  M  +  V D   +  +I    +    D++L+ 
Sbjct: 367 YGALLHG-----YATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 421

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
                + G  P  ITF+ VI A C  G++D A+     M +    P    Y  LI     
Sbjct: 422 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 481

Query: 453 LEKSYDACALYGAALKQGVIP 473
                 A  L    L +G+ P
Sbjct: 482 RRDLVKAKELISDMLSKGIPP 502



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 175/393 (44%), Gaps = 41/393 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ + K G N  +  F+ ++ A   L   + A++ F+     G+ P++  +S +I+  C
Sbjct: 421 MFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQC 480

Query: 132 NKND----------------------FF--------------EARKVIDCMFDNGYHPNV 155
           N+ D                      FF              E + V+D +   G  PN+
Sbjct: 481 NRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNL 540

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
            TF  LV+  C  G +KEA+ +LD M  +G +P+I TYN L+ G C  GR+++A  +  +
Sbjct: 541 ITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRD 600

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           + +  +     +Y  ++ G  +  R+  A E+ +E IE G+  ++ T+ T+  G C+   
Sbjct: 601 MLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNC 660

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   LL+ +   N   D ++++ ++  + K G+ + A  +F  +  +G      +   
Sbjct: 661 TDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGL-----VPTI 715

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L   + + +  +++  EDA  +F  M K     D      +IR L    +  +A  +L  
Sbjct: 716 LTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSK 775

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             + G +P   T + +I      GK  + + LL
Sbjct: 776 IDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 808



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 16/307 (5%)

Query: 174 ALEVLDQMGRIGC---KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           A+E+  +M R  C    P I TYN L+       R +    +   +   GL PDV++Y A
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 229

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++DGF K G  ++A +L  +  E+G+ PNVVT+++L NG CK     K   +L+ M    
Sbjct: 230 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 289

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             P+ ++Y+ L++G    G  + +V +FKEM       D    NS +  LC     +   
Sbjct: 290 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALC-----KHGR 344

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTI 406
           +++A  +F+ M  K    D  +YG ++     G  T   +  + +   +    G +P   
Sbjct: 345 IKEARDIFDSMVLKGPKPDVISYGALLH----GYATAGCIAGMDNLFNVMVCEGVVPDRH 400

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
            FN +I A    G +DK+LL+   M +    P   ++  +I+   +L +  DA   +   
Sbjct: 401 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 460

Query: 467 LKQGVIP 473
           +  GV P
Sbjct: 461 IDTGVPP 467



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/298 (21%), Positives = 121/298 (40%), Gaps = 35/298 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  D+ D I   G   ++  FN L+    ++   + AV       S G+ P+ +
Sbjct: 517 KEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIY 576

Query: 122 TFSIMIRCYCNK-----------------------------NDFFEARKVIDC------M 146
           T++ ++  YC                               +  F+AR+ I        M
Sbjct: 577 TYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 636

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            ++G   ++ T+  ++  LC++    EA  +L+++  +  K +I T+N +++ +  VGR 
Sbjct: 637 IESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRR 696

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA E+   +   GL P + TY  ++    K     +A  L +   +   TP+    N +
Sbjct: 697 QEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEI 756

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
                 +G   K    L  + K+  LP+  + S L+      GK R  + +  E  RF
Sbjct: 757 IRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRF 814


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 173/348 (49%), Gaps = 5/348 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L    ++++ +   G    V  +N L+  L  L    +AV+   E    G APN  T+S 
Sbjct: 332 LARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYST 391

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  +C    + +AR ++D M   G+  N   +  ++ +L K G+L EA+ ++ +M   G
Sbjct: 392 LLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQG 451

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CKP+I TYN ++  LC   +++EA  +  N+  +G+  +  TY  ++      GR  E +
Sbjct: 452 CKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGL 511

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L NE +  G   +VV++N L    CKEG   + + LL+ M  +   P+  SY+ L+N L
Sbjct: 512 RLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINEL 571

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GK+R A+ + KEM+  G   D    N+L+ GLC   W        A  + EK+  + 
Sbjct: 572 CKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHA-----ALNLLEKLPNEN 626

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
              D  TY I+I    K +  D+A + L  A+  G +P   T+  ++Q
Sbjct: 627 VHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQ 674



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 195/448 (43%), Gaps = 48/448 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   + D +   G    V+ FND+++ L  L     A +       +G  P+  T+  
Sbjct: 231 VAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGF 290

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHP--NVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           ++R  C      EA  ++      G  P  NV     ++      G+L  A E+ + MG 
Sbjct: 291 LLRGLCRTRQADEAYAML------GRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGS 344

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            GC P++ TYN L+ GLC +GR   A  ML  ++  G  P++ TY+ ++  FC+ G  ++
Sbjct: 345 KGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDD 404

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD--------- 294
           A  +L++   +G + N   +N +     K+G   + + L++ MK + C PD         
Sbjct: 405 ARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIY 464

Query: 295 --------------------------KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
                                      I+Y+TL++ LL  G+ +  + +  EMV  G  +
Sbjct: 465 HLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPL 524

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D    N L++ LC +   ++ ++     + E+M  K    +  +Y ++I  L K  K  +
Sbjct: 525 DVVSYNGLIKALCKEGNVDRSMM-----LLEEMMTKGIKPNNFSYNMLINELCKAGKVRD 579

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           AL      +  G  P  +T+N +I  LC  G    AL LL  +      P   +Y++LI+
Sbjct: 580 ALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 639

Query: 449 KLDQLEKSYDACALYGAALKQGVIPQRK 476
              ++    DA  L   A+  G++P  +
Sbjct: 640 WHCKVRLLDDASMLLDKAVSGGIVPNER 667



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 171/367 (46%), Gaps = 9/367 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S   +N +L  L   +    A+  +       + P ++TF +  R  C      +A  ++
Sbjct: 144 SFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALL 203

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M  +G  P+   +  ++++L   G + EA  +LD+M  +GC  ++ T+N ++ GLC +
Sbjct: 204 RGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGL 263

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G V EA  ++  +   G  P V TY  ++ G C+  +++EA  +L    E     NVV  
Sbjct: 264 GHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEV----NVVML 319

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           NT+  G   EG   +   L ++M  + C PD  +Y+ L++GL K G+   AV +  EM  
Sbjct: 320 NTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEE 379

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   +    ++LL   C        + +DA  + ++M+ K    +   Y  +I  LGK 
Sbjct: 380 KGCAPNIVTYSTLLHSFC-----RNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKD 434

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            K DEA+  +      G  P   T+N +I  LC   ++D+A  +   + E   + +  +Y
Sbjct: 435 GKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITY 494

Query: 444 DMLITKL 450
           + LI  L
Sbjct: 495 NTLIHAL 501



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 122/248 (49%), Gaps = 10/248 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E + +   +K  G    +  +N ++  L   ++ + A   F      G+  N  
Sbjct: 433 KDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGI 492

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I    +   + E  ++ + M  +G   +V ++  L+ +LCK G +  ++ +L++M
Sbjct: 493 TYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEM 552

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KPN  +YN L+  LC  G+V +A E+   + N GL PD+ TY  +++G CKVG +
Sbjct: 553 MTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 612

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ LL +     V P++VT+N L + +CK          ++L+   + L DK     +
Sbjct: 613 HAALNLLEKLPNENVHPDIVTYNILISWHCK----------VRLLDDASMLLDKAVSGGI 662

Query: 302 LNGLLKWG 309
           +     WG
Sbjct: 663 VPNERTWG 670



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 113/208 (54%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   IF ++ ++G   +   +N L+ AL+     +  ++  +E   +G   +  +++ 
Sbjct: 472 MDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNG 531

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+  C + +   +  +++ M   G  PN  ++ +L+N LCK+G++++ALE+  +M   G
Sbjct: 532 LIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 591

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+I TYN L+ GLC VG    A  +L  + N+ + PD+ TY  ++   CKV   ++A 
Sbjct: 592 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAS 651

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKE 273
            LL++A+  G+ PN  T+  +   + ++
Sbjct: 652 MLLDKAVSGGIVPNERTWGMMVQNFVRQ 679


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 157/284 (55%), Gaps = 8/284 (2%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           DR+ A+    R  I ++ K+D     V+ +N L+ AL  L   + A+  F++ +  G  P
Sbjct: 146 DRLDAA----RAVITEARKRDFAPDVVT-YNTLMAALFQLGRVDEALATFTQMTEEGYVP 200

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
              +F+ +I   C      +A +V + M D  +HPN+ T++++++ LCKS +L EA ++L
Sbjct: 201 TLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 260

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D+M   GC+P++  Y  L+ G    GR++ A  +L  + + G  PDV TYT V+D  CKV
Sbjct: 261 DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 320

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           GR ++A E+  E +    +PNVVT++ L  GYC+     +G    K+M++  C P+ ++Y
Sbjct: 321 GRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGG---KVMREMACRPNVVTY 377

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           +T++ GL    +   A  +F+EM   GF  D R    L R L M
Sbjct: 378 NTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRM 421



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 179/355 (50%), Gaps = 8/355 (2%)

Query: 95  LVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPN 154
           +V       A++ F E +   L  +S T++++IR +CN +D   A  ++  M   G   N
Sbjct: 1   MVRAGSHNQALQLFRE-NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEML 213
             T +I++  LC+ GR+ +ALE  D    +   +P++ +Y  L+ GLC +GRV+ A+++ 
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 214 MN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              V   G +P+ +TY A++DG CK  R + A  ++ EA +R   P+VVT+NTL     +
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   + +     M +   +P  +S++ ++ GL +  ++  A+ +F EM+   F  +   
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            + ++ GLC     + D L++A Q+ ++M  +    D   Y  ++       + D AL  
Sbjct: 240 YSVVIDGLC-----KSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 294

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           L   +  G IP  +T+  VI  LC  G++D A  +   +  +   P+  +Y  LI
Sbjct: 295 LRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALI 349



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 7/306 (2%)

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML-M 214
            T+ +L+   C +  L  A  +L +M   G + N +T + +L+GLC  GRV +A E    
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG-VTPNVVTFNTLFNGYCKE 273
           +++    +PDV +YT +++G CK+GR + A +L  + +  G   PN  T+N L +G CK+
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
                   ++   +KR+  PD ++Y+TL+  L + G++  A++ F +M   G+       
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           N+++ GLC         L DA +VF +M  +    +  TY +VI  L K  + DEA   L
Sbjct: 206 NAIITGLCRARR-----LADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 260

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
              +  G  P  + +  ++      G++D AL LL  M     IP   +Y ++I KL ++
Sbjct: 261 DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 320

Query: 454 EKSYDA 459
            +  DA
Sbjct: 321 GRVDDA 326



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 175/356 (49%), Gaps = 10/356 (2%)

Query: 62  KASPLKERIDIFD-SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPN 119
           +   + + ++ FD S++       V  +  L+  L  L   + A   F +  ++ G  PN
Sbjct: 72  RCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPN 131

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           ++T++ ++   C ++    AR VI       + P+V T+  L+ +L + GR+ EAL    
Sbjct: 132 AFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFT 191

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           QM   G  P + ++N ++ GLC   R+ +A E+   + +    P++ TY+ V+DG CK  
Sbjct: 192 QMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSD 251

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           + +EA +LL+  +  G  P++V +  L  G+   G     +GLL+ M  + C+PD ++Y+
Sbjct: 252 QLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYT 311

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            +++ L K G++  A  IF+E+V      +    ++L+ G C  S      +++  +V  
Sbjct: 312 VVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASR-----VDEGGKVMR 366

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           +M  + +V    TY  +I  L    + +EA        E G +P   T+  + +AL
Sbjct: 367 EMACRPNVV---TYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 136/284 (47%), Gaps = 7/284 (2%)

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L++G C    ++ A+ +L  +  +G++ +  T + ++ G C+ GR  +A+E  + +
Sbjct: 27  TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDAS 86

Query: 252 IERG-VTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWG 309
           +E     P+VV++ TL NG CK G       L  K++    C P+  +Y+ L++GL K  
Sbjct: 87  LELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQD 146

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A ++  E  +  F  D    N+L     M +  +   +++A   F +MT++  V  
Sbjct: 147 RLDAARAVITEARKRDFAPDVVTYNTL-----MAALFQLGRVDEALATFTQMTEEGYVPT 201

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             ++  +I  L + ++  +AL   +  I+    P  +T++ VI  LC   ++D+A  LL 
Sbjct: 202 LVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD 261

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M      P   +Y  L+       +   A  L    + QG IP
Sbjct: 262 RMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIP 305


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 210/452 (46%), Gaps = 49/452 (10%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K+   +E ++++  +  DG   SV  ++ L++A     + ET V    E   +G+ PN 
Sbjct: 193 VKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNV 251

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA------ 174
           ++++I IR       F EA K++  M D G  P+V T T+L+  LC +GR+ +A      
Sbjct: 252 YSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWK 311

Query: 175 -----------------------------LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
                                        +E+ + M   G   N+  Y  ++  LC VGR
Sbjct: 312 MKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGR 371

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           V+EA ++   +K  G++P  Y+Y +++ GF K  R N A+EL N     G TPN  T+  
Sbjct: 372 VDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVL 431

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
             N Y K G  +K +   +LMK +  +PD ++ + +L  L K G++  A  +F E+   G
Sbjct: 432 FINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIG 491

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              D      +++  C K+       ++A +VF +M +   V D      +I TL K  +
Sbjct: 492 VCPDNITYTMMIK-CCSKASNA----DEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGR 546

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            +EA    H   EM   P   T+N ++  L  EGK+ + + LL  M  ++  P+  +Y+ 
Sbjct: 547 GNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYN- 605

Query: 446 LITKLDQL----EKSYDACALYGAALKQGVIP 473
             T LD L    E +Y    LY   +K G +P
Sbjct: 606 --TVLDCLCKNGEVNYALGMLYNMTMK-GCMP 634



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 175/361 (48%), Gaps = 7/361 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E  D+FD +K+ G       +N L+   +  +    A++ F+  + +G  PN +T+ +
Sbjct: 372 VDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVL 431

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            I  Y    +  +A K  + M   G  P+V     ++ SL KSGRL  A  V  ++  IG
Sbjct: 432 FINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIG 491

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY  ++K        +EA ++   +      PDV    +++D   K GR NEA 
Sbjct: 492 VCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAW 551

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +E  E  + P   T+NTL  G  +EG   + + LL+ M   +  P+ I+Y+T+L+ L
Sbjct: 552 KIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCL 611

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G++  A+ +   M   G   D    N+ L GL      ++D L +A+++F +M KKV
Sbjct: 612 CKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLV-----KEDRLTEAFRIFCQM-KKV 665

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHL-HHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              D  T   ++ +  K    +EAL  L  + ++ G      +F+++++ +     ++K+
Sbjct: 666 LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKS 725

Query: 425 L 425
           +
Sbjct: 726 I 726



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 130/246 (52%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            +K+  L E +D++  +  +G + +   +  LL  L+   + E A   F E   YG  PN 
Sbjct: 857  VKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNR 916

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
              ++I++  Y    +  +  ++   M D G +P++ ++T+L+ +LC +GRL ++L    Q
Sbjct: 917  AIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQ 976

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            +  +G +P++ TYN L+ GL   GR+EEA  +  +++  G+ P++YTY +++    K G+
Sbjct: 977  LTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGK 1036

Query: 241  SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + EA ++  E ++ G  PNV T+N L  GY   G+          M    C P+  +Y  
Sbjct: 1037 AAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQ 1096

Query: 301  LLNGLL 306
            L N LL
Sbjct: 1097 LPNQLL 1102



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 182/388 (46%), Gaps = 10/388 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I  ++ +K  G    V   N +L +L        A + F E  S G+ P++ T+++MI+C
Sbjct: 446 IKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKC 505

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
               ++  EA KV   M +    P+V     L+++L K+GR  EA ++  ++  +   P 
Sbjct: 506 CSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPT 565

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN LL GL   G+V+E   +L  + ++   P++ TY  V+D  CK G  N A+ +L 
Sbjct: 566 DCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLY 625

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
               +G  P++ ++NT  +G  KE    +   +   MKK    PD  +  T+L   +K G
Sbjct: 626 NMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNG 684

Query: 310 KIRPAVSIFKE-MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
            +  A+   KE +++ G + D    +SL+ G+  ++  EK +     +  E +     + 
Sbjct: 685 LMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSI-----EFAENIALSRILL 739

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D      +IR L K KK  EA   +     +G   +T ++N +I  L  E  ID A  L 
Sbjct: 740 DDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLF 799

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKS 456
             M      P   +Y+++   LD + KS
Sbjct: 800 SEMKRLGCDPDEFTYNLI---LDAMGKS 824



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 146/313 (46%), Gaps = 38/313 (12%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            KA    E +  F+S+   G +     +N L+  LV  N  + A   FSE    G  P+ +
Sbjct: 756  KALEAHELVKKFESL---GVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEF 812

Query: 122  TFSIMIRCYCNK---NDFFEARKVIDC--------------------------------M 146
            T+++++          D  + +K + C                                +
Sbjct: 813  TYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKL 872

Query: 147  FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
               G+ P   T+  L++ L K G++++A ++ D+M   GCKPN   YN LL G    G  
Sbjct: 873  MSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNT 932

Query: 207  EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            E+  E+  N+ + G+ PD+ +YT ++   C  GR N+++    +  E G+ P+++T+N L
Sbjct: 933  EKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLL 992

Query: 267  FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             +G  + G   + V L   M+K    P+  +Y++L+  L K GK   A  +++E+++ G+
Sbjct: 993  IHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGW 1052

Query: 327  EVDERMMNSLLRG 339
            + +    N+L+ G
Sbjct: 1053 KPNVFTYNALIGG 1065



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 191/451 (42%), Gaps = 42/451 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KAS   E + +F  + +      V   N L+  L        A K F E     L P   
Sbjct: 508 KASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDC 567

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++     +    E   +++ M  N Y PN+ T+  +++ LCK+G +  AL +L  M
Sbjct: 568 TYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNM 627

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P++ +YN  L GL    R+ EA+ +   +K   L PD  T   ++  F K G  
Sbjct: 628 TMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLM 686

Query: 242 NEAMELLNEAI-ERGVTPNVVTFNTLFNGYCKEG------------------------TP 276
           NEA+  L E I + G   +  +F++L  G  K                          +P
Sbjct: 687 NEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSP 746

Query: 277 M--------KGVGLLKLMKKRNCLPDKI---SYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +        K +   +L+KK   L   +   SY+ L+ GL+    I  A  +F EM R G
Sbjct: 747 LIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLG 806

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            + DE   N +L  +  KS      +ED  +V ++M  K   +   TY  +I  L K K 
Sbjct: 807 CDPDEFTYNLILDAMG-KSMR----IEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKM 861

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             EA+   +  +  G  P   T+  ++  L  +GKI+ A  L   M ++   P+R  Y++
Sbjct: 862 LYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNI 921

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           L+        +   C L+   + QG+ P  K
Sbjct: 922 LLNGYRLAGNTEKVCELFQNMVDQGINPDIK 952



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 159/353 (45%), Gaps = 9/353 (2%)

Query: 98   LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
            L   E   KF     S G++  + +++ +I    ++N    A  +   M   G  P+  T
Sbjct: 758  LEAHELVKKF----ESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFT 813

Query: 158  FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
            + ++++++ KS R+++ L+V  +M   G +    TYN ++ GL     + EA ++   + 
Sbjct: 814  YNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLM 873

Query: 218  NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
            ++G  P   TY  ++DG  K G+  +A +L +E ++ G  PN   +N L NGY   G   
Sbjct: 874  SEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTE 933

Query: 278  KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
            K   L + M  +   PD  SY+ L+  L   G++  ++S F+++   G E D    N L+
Sbjct: 934  KVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLI 993

Query: 338  RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
             GL          LE+A  +F  M K     +  TY  +I  LGK  K  EA       +
Sbjct: 994  HGL-----GRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELL 1048

Query: 398  EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            + G  P   T+N +I      G  D A      M      P+ ++Y  L  +L
Sbjct: 1049 KNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPNQL 1101



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/398 (23%), Positives = 169/398 (42%), Gaps = 5/398 (1%)

Query: 76   IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
            I + G+    S F+ L+  ++     E +++F    +   +  + +  S +IR  C    
Sbjct: 697  ILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKK 756

Query: 136  FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
              EA +++      G      ++  L+  L     +  A  +  +M R+GC P+  TYN 
Sbjct: 757  ALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNL 816

Query: 196  LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
            +L  +    R+E+  ++   +   G +    TY  ++ G  K     EAM+L  + +  G
Sbjct: 817  ILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEG 876

Query: 256  VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             +P   T+  L +G  K+G       L   M    C P++  Y+ LLNG    G      
Sbjct: 877  FSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVC 936

Query: 316  SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
             +F+ MV  G   D +    L+  LC         L D+   F ++T+     D  TY +
Sbjct: 937  ELFQNMVDQGINPDIKSYTVLIGALCTAGR-----LNDSLSYFRQLTELGLEPDLITYNL 991

Query: 376  VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
            +I  LG+  + +EA+   +   + G  P   T+N++I  L  EGK  +A  +   + ++ 
Sbjct: 992  LIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNG 1051

Query: 436  KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              P+  +Y+ LI        + +A A YG  +  G  P
Sbjct: 1052 WKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPP 1089



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 101/475 (21%), Positives = 191/475 (40%), Gaps = 40/475 (8%)

Query: 34  AASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLM 93
           A S   A   D +E     Q    + R  A+   E + +F S+ +       ++  + ++
Sbjct: 60  AGSNKLAPPCDEREGRPGAQNVVHMLRSAAADPAEALQLFKSVAQQPRIVHTTESCNYML 119

Query: 94  ALVMLNEQ-ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
            L+  + +     + F       +  N  TF  + R    +     A   +  M + G  
Sbjct: 120 ELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIV 179

Query: 153 PNVTTFTILVNSLCKSGRLKEALEV----------------------------------L 178
            N  T+  L+  L KSG  +EA+EV                                  L
Sbjct: 180 LNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDVETVVWLL 239

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            +M   G KPN+ +Y   ++ L   GR EEAY++L  ++++G KPDV T T ++   C  
Sbjct: 240 REMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDA 299

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           GR ++A ++  +       P+ VT+ TL +     G     + +   MK      + ++Y
Sbjct: 300 GRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAY 359

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + +++ L + G++  A  +F +M + G E  +   NSL+ G       + D L  A ++F
Sbjct: 360 TAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFL-----KADRLNHALELF 414

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
             M       +  TY + I   GK  ++ +A+         G +P  +  N V+ +L   
Sbjct: 415 NHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKS 474

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G++  A  +   +      P   +Y M+I    +   + +A  ++   ++   +P
Sbjct: 475 GRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVP 529


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 187/398 (46%), Gaps = 22/398 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + +++KK G   S+  +N  LM L+   E   A     E  + G+ PN++T++IM+   C
Sbjct: 315 LVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLC 374

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             +   +AR ++D M  NG +P+   ++ L++  C  G++ EA  VL +M R GC+PN  
Sbjct: 375 RNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTY 434

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T N LL  L   GR  EA EML  +     +PD  T   V++G C+ G  ++A E+++E 
Sbjct: 435 TCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEM 494

Query: 252 IERGVTP--NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
              G T      +F +L N                +    NCLPD I+Y+TL+NGL K G
Sbjct: 495 WTNGPTSLDKGNSFASLIN---------------SIHNVSNCLPDGITYTTLINGLCKVG 539

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A   F EM+      D    ++ +   C     ++  +  A++V + M +      
Sbjct: 540 RLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFC-----KQGKISSAFRVLKDMERNGCSKT 594

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  +I  LG   +  E         E G  P   T+NN+I  LC  GK   A+ LL 
Sbjct: 595 LQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLH 654

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
            M +    P+ +S+ +LI    +      AC L+  AL
Sbjct: 655 EMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVAL 692



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 189/437 (43%), Gaps = 102/437 (23%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            +S+  +  +AP ++TF+++I   C    F  A ++ + M   G  PN  T  ILV  LC
Sbjct: 137 LYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLC 196

Query: 167 KSGRLKEALE----------------------------------VLDQMGRIGCKPNIQT 192
           ++G +K+ALE                                  ++++M  +G  P++ T
Sbjct: 197 RAGLVKQALELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVT 256

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKND---GL-KPDVYTYTAVMDGFCKVG--------- 239
           +N  +  LC  G+V EA  +  +++ D   GL +P+V T+  ++ GFCK G         
Sbjct: 257 FNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLV 316

Query: 240 -----------------------RSNEAME---LLNEAIERGVTPNVVTFNTLFNGYCKE 273
                                  R+ E +E   +L+E + +G+ PN  T+N + +G C+ 
Sbjct: 317 ETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRN 376

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
                  GL+ LM +    PD ++YSTLL+G    GK+  A S+  EM+R G + +    
Sbjct: 377 HMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTC 436

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA---- 389
           N+LL  L    W+E   LE A ++ +KM +K    D  T  IV+  L +  + D+A    
Sbjct: 437 NTLLHSL----WKEGRTLE-AEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIV 491

Query: 390 -------------------LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
                              LI+  H +    +P  IT+  +I  LC  G++++A      
Sbjct: 492 SEMWTNGPTSLDKGNSFASLINSIHNVS-NCLPDGITYTTLINGLCKVGRLEEAKKKFIE 550

Query: 431 MYEHAKIPSRTSYDMLI 447
           M      P   +YD  I
Sbjct: 551 MLAKNLRPDSVTYDTFI 567



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 150/336 (44%), Gaps = 43/336 (12%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P   TF +L++SLC+S     AL++ ++M + GC PN  T   L++GLC  G V++A E+
Sbjct: 148 PQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALEL 207

Query: 213 LMN-----------------------VKND-----------GLKPDVYTYTAVMDGFCKV 238
           + N                       + N+           G+ PDV T+ + +   C+ 
Sbjct: 208 VNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRA 267

Query: 239 GRSNEAMELLNEA---IERGV-TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           G+  EA  +  +     E G+  PNVVTFN +  G+CK G      GL++ MKK      
Sbjct: 268 GKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDS 327

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
              Y+  L GLL+ G++  A  +  EMV  G E +    N ++ GLC        +L DA
Sbjct: 328 LECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLC-----RNHMLSDA 382

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
             + + M +     D   Y  ++       K  EA   LH  I  G  P T T N ++ +
Sbjct: 383 RGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHS 442

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           L  EG+  +A  +L  M E    P   + ++++  L
Sbjct: 443 LWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGL 478



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 139/303 (45%), Gaps = 8/303 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+  T++ +I   C      EA+K    M      P+  T+   + S CK G++  A  V
Sbjct: 523 PDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRV 582

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L  M R GC   +QTYN L+ GL    ++ E Y +   +K  G+ PD+ TY  ++   C+
Sbjct: 583 LKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCE 642

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G++ +A+ LL+E +++G++PNV +F  L   + K         L ++     C   +  
Sbjct: 643 GGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNI-CGRKEAL 701

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           YS + N LL  G++  A  +F+  +     +   M   L+  LC     + + L DA  +
Sbjct: 702 YSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLC-----QDERLADANSL 756

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGK--GKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
             K+  K    D  ++  VI  L K   K+  + L      +E+   P   T++N  + +
Sbjct: 757 LYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMELELEDRPVDRTYSNRKRVI 816

Query: 416 CGE 418
            G+
Sbjct: 817 PGK 819



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 164/380 (43%), Gaps = 28/380 (7%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D + ++G       ++ LL       +   A     E    G  PN++T + ++    
Sbjct: 385 LMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLW 444

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG------ 185
            +    EA +++  M +  Y P+  T  I+VN LC++G L +A E++ +M   G      
Sbjct: 445 KEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDK 504

Query: 186 ----------------CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
                           C P+  TY  L+ GLC VGR+EEA +  + +    L+PD  TY 
Sbjct: 505 GNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYD 564

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
             +  FCK G+ + A  +L +    G +  + T+N L  G        +  GL   MK++
Sbjct: 565 TFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEK 624

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD  +Y+ ++  L + GK + A+S+  EM+  G   +      L+     K++ +  
Sbjct: 625 GISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILI-----KAFSKSS 679

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
             + A ++FE +   +       Y ++   L  G +  EA      +++     +   + 
Sbjct: 680 DFKVACELFE-VALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYK 738

Query: 410 NVIQALCGEGKIDKALLLLF 429
           ++I  LC + ++  A  LL+
Sbjct: 739 DLIARLCQDERLADANSLLY 758



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 2/239 (0%)

Query: 49  PRSLQAQRFV-DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+    F+    K   +     +   ++++G + ++  +N L++ L   N+       
Sbjct: 558 PDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGL 617

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E    G++P+  T++ +I C C      +A  ++  M D G  PNV++F IL+ +  K
Sbjct: 618 KDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSK 677

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           S   K A E+ +    I C      Y+ +   L   G++ EA E+     +  L    + 
Sbjct: 678 SSDFKVACELFEVALNI-CGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFM 736

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           Y  ++   C+  R  +A  LL + I++G   +  +F  + +G  K G   +   L K M
Sbjct: 737 YKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRM 795



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/287 (20%), Positives = 123/287 (42%), Gaps = 18/287 (6%)

Query: 196 LLKGLCYVGRVEEAYEMLMNVKND--GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           +++ L  +G V++A     +++     L P +  Y  ++    +  R      L ++ + 
Sbjct: 84  MVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLA 143

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
             V P   TFN L +  C+       + L + M ++ C P++ +   L+ GL + G ++ 
Sbjct: 144 ARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQ 203

Query: 314 AVSIF--KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           A+ +       R    V   + N+L+   C      +++  +A ++ E+M +   + D  
Sbjct: 204 ALELVNNNNSCRIANRV---VYNTLVSRFC-----REEMNNEAERLVERMNELGVLPDVV 255

Query: 372 TYGIVIRTLGKGKKTDEA---LIHLHHAIEMGHIPR--TITFNNVIQALCGEGKIDKALL 426
           T+   I  L +  K  EA      +    E+G +PR   +TFN +++  C  G +  A  
Sbjct: 256 TFNSRISALCRAGKVMEASRIFRDMQMDAELG-LPRPNVVTFNLMLKGFCKHGMMGDARG 314

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L+  M +     S   Y++ +  L +  +  +A  +    + +G+ P
Sbjct: 315 LVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEP 361


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 184/368 (50%), Gaps = 7/368 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N ++       E E A++  +E    G + +  T+ I+I  +C      EA  ++ 
Sbjct: 177 VVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLK 236

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G   ++  +T L+   C  G L     + D++   G  P   TYN L++G C +G
Sbjct: 237 EMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R++EA E+   +   G++P+VYTYT ++DG C VG++ EA++LLN  +++   PNVVT+N
Sbjct: 297 RLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYN 356

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            + N  CK+      + +++LMKKR   PD I+Y++LL GL   G +  A  +   M++ 
Sbjct: 357 IIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKD 416

Query: 325 GFEVDERMM--NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
               D  ++  N+L+ GLC     + + L  A  +++ + +K+   D  T  I++ +  K
Sbjct: 417 SSYTDPDVISFNALIHGLC-----KGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLK 471

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
               ++A+           +P + T+  +I   C  G ++ A  LL  M      PS   
Sbjct: 472 SGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFD 531

Query: 443 YDMLITKL 450
           Y+ L++ L
Sbjct: 532 YNCLLSSL 539



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 186/372 (50%), Gaps = 7/372 (1%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G  ++V ++N LL  L    E   AV    E     L P+  +++ +IR +C   +  
Sbjct: 135 KRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELE 194

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +A ++ + M  +G   ++ T+ IL+++ CK+G++ EA+ +L +M   G + ++  Y  L+
Sbjct: 195 KALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLI 254

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
           +G C  G ++    +   V   G  P   TY  ++ GFCK+GR  EA E+    +ERGV 
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVR 314

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PNV T+  L +G C  G   + + LL LM +++  P+ ++Y+ ++N L K   +  A+ I
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEI 374

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGI 375
            + M +     D    NSLL GLC K       L++A ++   M K  S TDP   ++  
Sbjct: 375 VELMKKRRTRPDNITYNSLLGGLCAKGD-----LDEASKLLYLMLKDSSYTDPDVISFNA 429

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I  L KG +  +AL      +E       +T N ++ +    G ++KA+ L   +    
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK 489

Query: 436 KIPSRTSYDMLI 447
            +P+  +Y  +I
Sbjct: 490 IVPNSDTYTTMI 501



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 192/400 (48%), Gaps = 8/400 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK  + +F      G + S +  N+L+  LV     E A  F+ +        N  + S 
Sbjct: 54  LKNAVSVFQQAVDSGGSLSFAG-NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSG 112

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++ C+        A  V+  M   G+  NV  + IL+  LC++    +A+ +L +M +  
Sbjct: 113 LLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNS 172

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ +YN +++G C    +E+A ++   ++  G    + T+  ++D FCK G+ +EAM
Sbjct: 173 LMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAM 232

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL E   +G+  +++ + +L  G+C  G   +G  L   + +R   P  I+Y+TL+ G 
Sbjct: 233 GLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+++ A  IF+ M+  G   +      L+ GLC          ++A Q+   M +K 
Sbjct: 293 CKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKT-----KEALQLLNLMLQKD 347

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY I+I  L K     +AL  +    +    P  IT+N+++  LC +G +D+A 
Sbjct: 348 EEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEAS 407

Query: 426 LLLFLMYEHAKI--PSRTSYDMLITKLDQLEKSYDACALY 463
            LL+LM + +    P   S++ LI  L +  + + A  +Y
Sbjct: 408 KLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIY 447



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 189/416 (45%), Gaps = 11/416 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E + +   +K  G    +  +  L+       E +     F E    G +P + 
Sbjct: 224 KAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +IR +C      EA ++ + M + G  PNV T+T L++ LC  G+ KEAL++L+ M
Sbjct: 284 TYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +   +PN+ TYN ++  LC    V +A E++  +K    +PD  TY +++ G C  G  
Sbjct: 344 LQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDL 403

Query: 242 NEAMELLNEAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           +EA +LL   ++      P+V++FN L +G CK     + + +  L+ ++    D ++ +
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTN 463

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            LLN  LK G +  A+ ++K++       +     +++ G C     +  +L  A  +  
Sbjct: 464 ILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFC-----KTGMLNVAKGLLC 518

Query: 360 KMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           KM  ++S   P    Y  ++ +L K    D+A             P  I+FN +I     
Sbjct: 519 KM--RLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLK 576

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            G I  A  LL  M      P   +Y  LI +  +L    +A + +   +  G  P
Sbjct: 577 AGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEP 632



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 183/389 (47%), Gaps = 42/389 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + + G +     +N L+     L   + A + F      G+ PN +T++ +I   C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLC 328

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA ++++ M      PNV T+ I++N LCK   + +ALE+++ M +   +P+  
Sbjct: 329 GVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNI 388

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           TYN LL GLC  G ++EA ++L  +  D     PDV ++ A++ G CK  R ++A+++ +
Sbjct: 389 TYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYD 448

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             +E+    ++VT N L N   K G   K + L K +     +P+  +Y+T+++G  K G
Sbjct: 449 LLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTG 508

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +  A  +  +M            N LL  LC     +K  L+ A+++FE+M +  S  D
Sbjct: 509 MLNVAKGLLCKMRLSELPPSVFDYNCLLSSLC-----KKGTLDQAWRLFEEMQRDDSFPD 563

Query: 370 PGTYGIVIR---TLGKGKKTDEALIHLHHA----------------IEMGHIPRTITF-- 408
             ++ I+I      G  K  +  L+ + HA                +++G++   I+F  
Sbjct: 564 VISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 409 --------------NNVIQALCGEGKIDK 423
                         ++V++    +G+ DK
Sbjct: 624 KMIDSGFEPDAHICDSVLKYCISQGETDK 652



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 149/318 (46%), Gaps = 6/318 (1%)

Query: 47  ENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM---LNEQE 102
           E P  +     ++++ K S + + ++I + +KK  T      +N LL  L     L+E  
Sbjct: 348 EEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEAS 407

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
             +    + SSY   P+  +F+ +I   C  N   +A  + D + +     ++ T  IL+
Sbjct: 408 KLLYLMLKDSSY-TDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILL 466

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
           NS  KSG + +A+E+  Q+      PN  TY  ++ G C  G +  A  +L  ++   L 
Sbjct: 467 NSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELP 526

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P V+ Y  ++   CK G  ++A  L  E       P+V++FN + +G  K G       L
Sbjct: 527 PSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESL 586

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L  M      PD  +YS L+N  LK G +  A+S F +M+  GFE D  + +S+L+  C+
Sbjct: 587 LVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLK-YCI 645

Query: 343 KSWEEKDLLEDAYQVFEK 360
              E   L E   ++ +K
Sbjct: 646 SQGETDKLTEFVKKLVDK 663



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 125/242 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + L + +DI+D + +      +   N LL + +   +   A++ + + S+  + PNS 
Sbjct: 436 KGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSD 495

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ MI  +C       A+ ++  M  +   P+V  +  L++SLCK G L +A  + ++M
Sbjct: 496 TYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEM 555

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R    P++ ++N ++ G    G ++ A  +L+ + + GL PD++TY+ +++ F K+G  
Sbjct: 556 QRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYL 615

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA+   ++ I+ G  P+    +++      +G   K    +K +  ++ + DK    T+
Sbjct: 616 DEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTV 675

Query: 302 LN 303
           ++
Sbjct: 676 MD 677



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 6/235 (2%)

Query: 240 RSNE-AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           R++E A     + +E     N V+ + L   + +        G+L LM KR    +  +Y
Sbjct: 86  RNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNY 145

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + LL GL +  +   AVS+ +EM +     D    N+++RG C     E   LE A Q+ 
Sbjct: 146 NILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFC-----EGKELEKALQLA 200

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            +M          T+GI+I    K  K DEA+  L      G     I + ++I+  C  
Sbjct: 201 NEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDC 260

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G++D+   L   + E    P   +Y+ LI    +L +  +A  ++   +++GV P
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRP 315



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 77/162 (47%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           L P+ + ++ ++   C K    +A ++ + M  +   P+V +F I+++   K+G +K A 
Sbjct: 525 LPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAE 584

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            +L  M   G  P++ TY+ L+     +G ++EA      + + G +PD +   +V+   
Sbjct: 585 SLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYC 644

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
              G +++  E + + +++ V  +     T+ +  C     M
Sbjct: 645 ISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNM 686


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 200/426 (46%), Gaps = 49/426 (11%)

Query: 72  IFD-SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
            FD S K++G    V  +  LL  LV       AV+FF         P+ ++F+I+I+C+
Sbjct: 30  FFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCF 89

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           CN  +   A + +  M   G  P+VT + +++   C  GR+  AL    +MG+  CKPN+
Sbjct: 90  CNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNV 148

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT--------------------- 229
            TYN ++ GLC  G+++ A  +   + +D + PD +TY+                     
Sbjct: 149 ATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDM 208

Query: 230 --------------AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
                         A+ DGFCK  R +EA+E+L   I+R   P+VVT+N + NG C+   
Sbjct: 209 MLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKN 268

Query: 276 PM-KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
            + +   L + M   +C P+ ++Y T++ GL K  +++  + +FK M + G   D    +
Sbjct: 269 RIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYH 328

Query: 335 SLLRGL--CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK--TDEAL 390
           SL+       K  E K +L+DA        +     D   Y  +I    + +K   DEAL
Sbjct: 329 SLIYAFVKVRKLDEAKSILQDA-------ARNHVGPDVYMYTTLISGYCRARKPRVDEAL 381

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +   +  +    P  IT+N V++ LC  G+ D+A  +   M++    P+R ++ ++   +
Sbjct: 382 LLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGM 441

Query: 451 DQLEKS 456
               K+
Sbjct: 442 IHCRKT 447



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 3/267 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+  I ++D + +   +     +N +          + A++           P+  
Sbjct: 195 QAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVV 254

Query: 122 TFSIMIRCYCN-KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T++ +I   C  KN   EA ++   M  +   PN  T+  ++  L K   ++  LE+   
Sbjct: 255 TYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKG 314

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV-- 238
           M + G  P+   Y+ L+     V +++EA  +L +   + + PDVY YT ++ G+C+   
Sbjct: 315 MSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARK 374

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
            R +EA+ L     +R V PNV+T+N +  G CK G   +   + + M K  C P+++++
Sbjct: 375 PRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTF 434

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFG 325
             +  G++   K      IF +MV  G
Sbjct: 435 KVMTMGMIHCRKTDKFERIFMDMVYKG 461


>gi|115482518|ref|NP_001064852.1| Os10g0476900 [Oryza sativa Japonica Group]
 gi|110289255|gb|AAP54273.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|110289256|gb|ABG66138.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113639461|dbj|BAF26766.1| Os10g0476900 [Oryza sativa Japonica Group]
 gi|215737151|dbj|BAG96080.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 599

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 187/362 (51%), Gaps = 5/362 (1%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N L+  L    +  +A++   +    G +P+  TF+ +IRC  N+  +  A         
Sbjct: 211 NMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWKEQLR 270

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G+ P   T T+LV+ +CK+   ++ALEVLD++   GC+P++ TYN L+   C  GR+ +
Sbjct: 271 LGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLND 330

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +L  +  +GL+P+  TY  ++   C + R +E  +LL +  +    P+V T+N   N
Sbjct: 331 AKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFIN 390

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
            +CK G   + + +L+ M   NC PD ++ +TLLN + K G +  A+ I + +   G+++
Sbjct: 391 YFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKL 450

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                N+L+  L  K+  +K     A  +F++M       D  TYG ++    K    DE
Sbjct: 451 VLITYNTLIDALAKKAEVKK-----AMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADE 505

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           AL  L+  + +G   +T TF  VIQALC +GK++ A  +  +M     IP  +    ++T
Sbjct: 506 ALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVT 565

Query: 449 KL 450
           K+
Sbjct: 566 KV 567



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 153/349 (43%), Gaps = 9/349 (2%)

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +R YCN     +A  VID M  +G  P       ++  L K+G+  +A  VL+ M   G 
Sbjct: 144 LRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGG 203

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P+  + N L+  LC  G++  A ++L +++  G  P   T+  ++         + A+ 
Sbjct: 204 VPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAIS 263

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
              E +  G  P  +T   L +  CK   P K + +L  +    C PD ++Y+ L++   
Sbjct: 264 FWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASC 323

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEK-DLLEDAYQVFEKMTKK 364
           K G++  A  I   +   G E +      LL  LC M+ W+E  DLLED  QV       
Sbjct: 324 KAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRD---- 379

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY I I    K    D+A+  L   +     P  +T N ++ A+  +G +++A
Sbjct: 380 ---PDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEA 436

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L +   + E+       +Y+ LI  L +  +   A  L+   L  G+ P
Sbjct: 437 LGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISP 485



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 154/351 (43%), Gaps = 48/351 (13%)

Query: 8   NSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPL 66
           N+ I    N+R +++   F K            E L L   P  + +   VD + K    
Sbjct: 246 NTLIRCMFNQRMYDRAISFWK------------EQLRLGWPPYEMTSTLLVDLVCKNCGP 293

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           ++ +++ D +  +G    V  +N L+ A         A    +  ++ GL PN  T+ I+
Sbjct: 294 QKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCIL 353

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +   CN   + E   +++ M      P+VTT+ I +N  CK G L +A++VL++M    C
Sbjct: 354 LHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNC 413

Query: 187 KPNIQTYNCLLKGLCYVGRVEEA-----------YEMLMNVKN----------------- 218
            P+I T N LL  +   G VEEA           Y++++   N                 
Sbjct: 414 SPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMV 473

Query: 219 -------DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
                  DG+ PD  TY +++ GFCK   ++EA++LLN+ +  G      TF  +    C
Sbjct: 474 LFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALC 533

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           ++G       + K+M  +N +P     S+++  + K G  + A  + +++V
Sbjct: 534 RDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWNKEAQMLHQKLV 584



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 84/192 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L + ID+ + +  +  +  +   N LL A+      E A+         G      
Sbjct: 394 KYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLI 453

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I     K +  +A  + D M  +G  P+  T+  LV   CK     EAL++L+QM
Sbjct: 454 TYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQM 513

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G +    T+  +++ LC  G+VE A E+   + +    P     ++++    K G +
Sbjct: 514 LTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWN 573

Query: 242 NEAMELLNEAIE 253
            EA  L  + +E
Sbjct: 574 KEAQMLHQKLVE 585


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 187/370 (50%), Gaps = 6/370 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+  F   ++ G+ P   T + ++      N+  ++  V + M   G  P+V  F+  +N
Sbjct: 263 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAIN 321

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           + CK G++++A+++   M ++G  PN+ TYN L+ GLC  G ++EA+     +  DG+  
Sbjct: 322 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 381

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            + TY+ +++G  K+ + NEA  +L E +E+G TPN V +NTL +GYCK G     + + 
Sbjct: 382 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 441

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M  +   P+ ++ ++++ G  K G++  A  I +EM+  GF ++     +++  LCM 
Sbjct: 442 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMN 501

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           S       E A +   +M  +    + G    ++  L K  K  +A+      +E G   
Sbjct: 502 S-----RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA 556

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             +T N +I  LC  G + +A+ LL  M E   +  + +Y+ LI+   +  K  +   L 
Sbjct: 557 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLR 616

Query: 464 GAALKQGVIP 473
           G  +KQG+ P
Sbjct: 617 GEMVKQGIEP 626



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 192/412 (46%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E     + + KDG N ++  ++ L+  L+ L +   A     E    G  PN  
Sbjct: 360 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 419

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  YC   +  +A ++   M   G +PN  T   ++   CK G++++A  +L++M
Sbjct: 420 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 479

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   N   +  ++  LC   R E A   L  +    ++P+    T ++ G CK G+ 
Sbjct: 480 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 539

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A+EL    +E+G   N+VT N L +G CK G   + V LLK M +R  + DKI+Y+TL
Sbjct: 540 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 599

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K GK+     +  EMV+ G E D    N L+ G+C         L++A  ++ + 
Sbjct: 600 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMC-----RIGKLDEAVNLWNEC 654

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +  V +  TYG++I    K  K +E        +       ++ +N +I+A C  G  
Sbjct: 655 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 714

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +A  L   M      P+  +Y  LI  +  + +  DA  L     K+G++P
Sbjct: 715 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 766



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 204/411 (49%), Gaps = 6/411 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA+ L++   +F+++++ G +  V  F+  + A     + E A++ F +    G++PN 
Sbjct: 290 VKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNV 348

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I   C   +  EA +  + M  +G +  + T+++L+N L K  +  EA  VL +
Sbjct: 349 VTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKE 408

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
               G  PN   YN L+ G C +G + +A  +  ++ + G+ P+  T  +++ GFCK+G+
Sbjct: 409 TLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQ 468

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  +L E + RG + N   F T+ +  C        +  L+ M  RN  P+    +T
Sbjct: 469 MEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTT 528

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+ GL K GK   AV ++  ++  GF  +    N+L+ GLC     +   +++A ++ +K
Sbjct: 529 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC-----KTGNMQEAVRLLKK 583

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++  V D  TY  +I    K  K +E        ++ G  P T T+N +I  +C  GK
Sbjct: 584 MLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGK 643

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           +D+A+ L         +P+  +Y ++I    + +K  +   L+   L Q +
Sbjct: 644 LDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 694



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 203/450 (45%), Gaps = 12/450 (2%)

Query: 28  KLVVFAAASLSTAESLDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVS 86
           KL  F  A+    E+L+    P  +     +D   K   L + + I   +   G N +  
Sbjct: 395 KLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 454

Query: 87  DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
             N ++     + + E A     E  S G + N   F+ +I   C  + F  A + +  M
Sbjct: 455 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 514

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
                 PN    T LV  LCK G+  +A+E+  ++   G   N+ T N L+ GLC  G +
Sbjct: 515 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 574

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA  +L  +   G   D  TY  ++ G CK G+  E  +L  E +++G+ P+  T+N L
Sbjct: 575 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 634

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G C+ G   + V L    K R+ +P+  +Y  +++G  K  KI     +F E++    
Sbjct: 635 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 694

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           E++  + N+L+R  C       + +E A+++ + M  K       TY  +I  +    + 
Sbjct: 695 ELNSVVYNTLIRAYC----RNGNTVE-AFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 749

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           ++A   +    + G +P  + +  +I   C  G++DK + +L  M  +   P++ +Y ++
Sbjct: 750 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 809

Query: 447 ITKLDQLEKSYD---ACALYGAALKQGVIP 473
           I   D   KS D   A  L    + +G++P
Sbjct: 810 I---DGYSKSGDMKTAAKLLHEMVGKGIVP 836



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 174/360 (48%), Gaps = 15/360 (4%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  L    +   AV+ +      G   N  T + +I   C   +  EA +++  M + G
Sbjct: 529 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 588

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           +  +  T+  L++  CK G+++E  ++  +M + G +P+  TYN L+ G+C +G+++EA 
Sbjct: 589 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 648

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +    K+  L P+VYTY  ++DG+CK  +  E  +L  E + + +  N V +NTL   Y
Sbjct: 649 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 708

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+ G  ++   L   M+ +   P   +YS+L++G+   G++  A  +  EM + G   + 
Sbjct: 709 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 768

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +L+ G C     +   ++    V ++M+      +  TY ++I    K      A 
Sbjct: 769 VCYTALIGGYC-----KLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAA 823

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL----------LFLMYEHAKIPSR 440
             LH  +  G +P T+T+N +    C EGKI++  LL          LFL++E  +  +R
Sbjct: 824 KLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGVGFNSPLFLIHEAFRACTR 883



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 133/263 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E   +   + K G       +N L+  +  + + + AV  ++E  S  L PN +
Sbjct: 605 KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY 664

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ +MI  YC  +   E  K+   +       N   +  L+ + C++G   EA ++ D M
Sbjct: 665 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 724

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P   TY+ L+ G+C +GR+E+A  ++  ++ +GL P+V  YTA++ G+CK+G+ 
Sbjct: 725 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQM 784

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++ + +L E     + PN +T+  + +GY K G       LL  M  +  +PD ++Y+ L
Sbjct: 785 DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVL 844

Query: 302 LNGLLKWGKIRPAVSIFKEMVRF 324
            NG  K GKI     + ++ V F
Sbjct: 845 TNGFCKEGKIEEGKLLAEDGVGF 867



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 160/362 (44%), Gaps = 56/362 (15%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + ++++  + + G   ++   N L+  L      + AV+   +    G   +  T++ +I
Sbjct: 541 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 600

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    E  K+   M   G  P+  T+ +L++ +C+ G+L EA+ + ++       
Sbjct: 601 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 660

Query: 188 PNIQTYNCLLKGLCYVGRVE-----------------------------------EAYEM 212
           PN+ TY  ++ G C   ++E                                   EA+++
Sbjct: 661 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 720

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
             ++++ G+ P   TY++++ G C +GR  +A  L++E  + G+ PNVV +  L  GYCK
Sbjct: 721 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 780

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   K V +L+ M   +  P+KI+Y+ +++G  K G ++ A  +  EMV  G   D   
Sbjct: 781 LGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVT 840

Query: 333 MNSLLRGLCM--KSWEEKDLLEDA----------YQVFEKMTKKVSV---------TDPG 371
            N L  G C   K  E K L ED           ++ F   T++V +         T+P 
Sbjct: 841 YNVLTNGFCKEGKIEEGKLLAEDGVGFNSPLFLIHEAFRACTRRVDLWAKKFFANYTNPS 900

Query: 372 TY 373
           +Y
Sbjct: 901 SY 902


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 191/409 (46%), Gaps = 6/409 (1%)

Query: 56  RFVDRIK-ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY 114
           +F+D ++ A  +   +D +  +        V DFN L   +  +    TA+      S  
Sbjct: 53  QFLDSMRNAKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYI 112

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+ P   T +I+I C C  +       V+  MF  G  P++ TF  +VN LC  G + +A
Sbjct: 113 GVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQA 172

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           +  +D +  +G + +  T   +  GLC VG    A   L  ++      DV  Y+ V+DG
Sbjct: 173 IRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDG 232

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK G   EA+ L ++   +G+ P++ T+N L +G C      +   LL  M ++  +PD
Sbjct: 233 LCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 292

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
             +++ +     K G I  A SIF  MV  G E D     S++   CM      + ++DA
Sbjct: 293 VQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCM-----LNQMKDA 347

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            +VF+ M  K  + +  TY  +I    + K  ++A+  L   +  G  P  +T++ +I  
Sbjct: 348 MEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGG 407

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +C  GK   A  L  +M++H ++P+  +  +++  L +     +A +L+
Sbjct: 408 VCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLF 456



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 175/344 (50%), Gaps = 5/344 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+  FS+ +  G+ P+ +T++ +I   CN + + EA  ++  M   G  P+V TF ++  
Sbjct: 242 ALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAG 301

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
              K+G +  A  +   M  +G + ++ TY  ++   C + ++++A E+   + + G  P
Sbjct: 302 RFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLP 361

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           ++ TYT+++ G+C+    N+AM  L E +  G+ PNVVT++TL  G CK G P+    L 
Sbjct: 362 NIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELF 421

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            +M K   LP+  + + +L+GL K      A+S+F+E+ +  ++++  + N +L G+C  
Sbjct: 422 LVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMC-- 479

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                  L DA ++F  ++ K    D  TY I+I+ L K    D+A   L    E G  P
Sbjct: 480 ---SSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPP 536

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              T+N  +Q L    +I K+   L  M +       T+   LI
Sbjct: 537 NECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLI 580



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 180/408 (44%), Gaps = 40/408 (9%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G   S+  FN ++  L +      A++F       G   +S+T   +    C      
Sbjct: 146 KIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSS 205

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
            A   +  M +   + +VT ++ +V+ LCK G + EAL +  QM   G +P++ TYNCL+
Sbjct: 206 AALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLI 265

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            GLC   R +EA  +L N+   G+ PDV T+  +   F K G  + A  + +  +  G+ 
Sbjct: 266 HGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIE 325

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            +VVT+ ++   +C        + +  LM  + CLP+ ++Y++L++G  +   +  A+  
Sbjct: 326 HDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYF 385

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             EMV  G + +    ++L+ G+C            A ++F  M K   + +  T  I++
Sbjct: 386 LGEMVNNGLDPNVVTWSTLIGGVCKAGKPVA-----AKELFLVMHKHGQLPNLQTCAIIL 440

Query: 378 RTLGKGKKTDEALI----------------------------HLHHAIEM-------GHI 402
             L K     EA+                              L+ A+E+       G  
Sbjct: 441 DGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVK 500

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              +T+N +I+ LC EG +D A  LL  M E+   P+  +Y++ +  L
Sbjct: 501 IDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGL 548



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 5/313 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E +++F  +   G    +  +N L+  L   +  + A    +     G+ P+  TF+++ 
Sbjct: 241 EALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIA 300

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             +        A+ +   M   G   +V T+T ++ + C   ++K+A+EV D M   GC 
Sbjct: 301 GRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCL 360

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PNI TY  L+ G C    + +A   L  + N+GL P+V T++ ++ G CK G+   A EL
Sbjct: 361 PNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKEL 420

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
                + G  PN+ T   + +G  K     + + L + ++K N   + I Y+ +L+G+  
Sbjct: 421 FLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCS 480

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK+  A+ +F  +   G ++D    N +++GLC     ++ LL+DA  +  KM +    
Sbjct: 481 SGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLC-----KEGLLDDAEDLLMKMEENGCP 535

Query: 368 TDPGTYGIVIRTL 380
            +  TY + ++ L
Sbjct: 536 PNECTYNVFVQGL 548



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 3/276 (1%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           A RF    K   +     IF  +   G    V  +  ++ A  MLN+ + A++ F    S
Sbjct: 300 AGRF---FKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMIS 356

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
            G  PN  T++ +I  +C   +  +A   +  M +NG  PNV T++ L+  +CK+G+   
Sbjct: 357 KGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVA 416

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A E+   M + G  PN+QT   +L GL       EA  +   ++      ++  Y  ++D
Sbjct: 417 AKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILD 476

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G C  G+ N+A+EL +    +GV  +VVT+N +  G CKEG       LL  M++  C P
Sbjct: 477 GMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPP 536

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           ++ +Y+  + GLL+  +I  +      M   GF+ D
Sbjct: 537 NECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQAD 572



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 136/314 (43%), Gaps = 5/314 (1%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
            ++S+  +  +  AL+   +M  +   P ++ +N L   +  +     A  ++ ++   G
Sbjct: 54  FLDSMRNAKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIG 113

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           +KP V+T   V++  C++  +     +L    + GV P++VTFNT+ NG C EG   + +
Sbjct: 114 VKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAI 173

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
             +  +K      D  +   + NGL K G    A+S  K+M      +D    + ++ GL
Sbjct: 174 RFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGL 233

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     +  ++ +A  +F +MT K    D  TY  +I  L    +  EA   L + +  G
Sbjct: 234 C-----KDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKG 288

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
            +P   TFN +       G I +A  +   M          +Y  +I     L +  DA 
Sbjct: 289 IMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAM 348

Query: 461 ALYGAALKQGVIPQ 474
            ++   + +G +P 
Sbjct: 349 EVFDLMISKGCLPN 362



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 1/118 (0%)

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C+     +A ++   +   G   +V T+ I++  LCK G L +A ++L +M   GC PN 
Sbjct: 479 CSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNE 538

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
            TYN  ++GL    ++ ++ + LM +K+ G + D  T   +++ F    + N A+E+ 
Sbjct: 539 CTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLINYF-SANKENRALEVF 595


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 208/462 (45%), Gaps = 43/462 (9%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D + KA  +     +F  +   G   S   +N ++  L      + A   
Sbjct: 258 PNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGV 317

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F +    G+ P+  T++ +I   C      +A  V   M D G  P+  T+TI+++ LCK
Sbjct: 318 FQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCK 377

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +  +  A  V  QM   G KPN  TYNCL+ G    G+ EE  + +  +    L+PDV+T
Sbjct: 378 AQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFT 437

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL-- 285
           Y  ++D  CK G+ NEA  L +  I +G+ P+V  +  + +GY K+G   +   LL L  
Sbjct: 438 YGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMV 497

Query: 286 ---------------------------------MKKRNCLPDKISYSTLLNGLLKWGKIR 312
                                            MK++   P+ ++Y TL++ L K G++ 
Sbjct: 498 ANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVD 557

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
            AV  F +M+  G   +  + NSL+ GLC +  WE+ +      ++F +M  +    D  
Sbjct: 558 DAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVE------ELFLEMLNQGIRPDIV 611

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            +  V+  L K  +  EA   +   + MG  P  I++N +I   C   ++D+A+ LL  M
Sbjct: 612 FFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGM 671

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                 P+  SY+ L+    +  +  +A  L+   L++GV P
Sbjct: 672 VSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTP 713



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 180/394 (45%), Gaps = 5/394 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G +  V  +N ++  L    E + A   F +    G+ PN+ T++ +I   C   +   A
Sbjct: 220 GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMA 279

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             V   M D G  P+  T+  +++ LCK+  +  A  V  QM   G KP+  TYN ++ G
Sbjct: 280 EGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDG 339

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC    +++A  +   + + G+KPD  TYT ++DG CK    + A  +  + I++GV PN
Sbjct: 340 LCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPN 399

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
             T+N L +GY   G   + V  +K M   +  PD  +Y  LL+ L K GK   A S+F 
Sbjct: 400 NGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFD 459

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            M+R G +    +   +L G     + +K  L + + +   M       +   +  VI  
Sbjct: 460 SMIRKGIKPSVTIYGIMLHG-----YGKKGALSEMHDLLNLMVANGISPNHRIFNTVICA 514

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
             K    DE +       + G  P  +T+  +I ALC  G++D A+L    M      P+
Sbjct: 515 YAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPN 574

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              ++ L+  L  ++K      L+   L QG+ P
Sbjct: 575 NVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRP 608



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 203/450 (45%), Gaps = 47/450 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVML---NEQETAVKFFSEA---SSYGLAPN 119
           L + + +FD +       SV   N LL  +      +  + AV  F+      S  +AP+
Sbjct: 24  LHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPD 83

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL- 178
             T+SI+I C+C              +   G+  +      L+  LC + R+ EA+ VL 
Sbjct: 84  CCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLL 143

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML-MNVKND------------------ 219
            QM  +GC+  + +YN LLKGLC   R EEA E+L M V                     
Sbjct: 144 RQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGF 203

Query: 220 ----------------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
                           G+ PDV TY  ++DG CK    + A ++  + +E+GV PN VT+
Sbjct: 204 FNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTY 263

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           NT+ +G CK        G+ + M  +   P  ++Y+T+++GL K   +  A  +F++M+ 
Sbjct: 264 NTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMID 323

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G + D    N+++ GLC     +   ++ A  VF++M  K    D  TY I+I  L K 
Sbjct: 324 RGVKPDHVTYNTIIDGLC-----KAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           +  D A       I+ G  P   T+N +I      G+ ++ +  +  M  H   P   +Y
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTY 438

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +L+  L +  K  +A +L+ + +++G+ P
Sbjct: 439 GLLLDYLCKNGKCNEARSLFDSMIRKGIKP 468



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 191/412 (46%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K     E   +FDS+ + G   SV+ +  +L                +   + G++PN  
Sbjct: 447 KNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHR 506

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  Y  +    E   +   M   G  PNV T+  L+++LCK GR+ +A+   +QM
Sbjct: 507 IFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQM 566

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN   +N L+ GLC V + E+  E+ + + N G++PD+  +  V+   CK GR 
Sbjct: 567 INEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRV 626

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L++  +  G+ P+V+++NTL +G+C      + V LL  M      P+ +SY+TL
Sbjct: 627 MEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTL 686

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+G  K G+I  A  +F+EM+R G        N++L GL  +S        +A +++  M
Sbjct: 687 LHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGL-FRSGR----FSEARELYVNM 741

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K   +    TY I++    K    DEA         M      ITFN +I  L   G+ 
Sbjct: 742 IKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRK 801

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + A+ L   +  +  +PS  +Y ++   L +     +   L+    K G  P
Sbjct: 802 EDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAP 853



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 186/427 (43%), Gaps = 36/427 (8%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETA---VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           G    V  +N LL  L      E A   +    +      +P+  +++I+I  + N+   
Sbjct: 150 GCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEG-- 207

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            +  K      + G  P+V T+  +++ LCK+  +  A +V  QM   G KPN  TYN +
Sbjct: 208 -QVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTI 266

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           + GLC    V+ A  +   + + G+KP   TY  ++DG CK    + A  +  + I+RGV
Sbjct: 267 IDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGV 326

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            P+ VT+NT+ +G CK     K  G+ + M  +   PD ++Y+ +++GL K   +  A  
Sbjct: 327 KPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEG 386

Query: 317 IFKEMVRFGFEVDERMMNSLLRG-LCMKSWEE----------KDLLEDAY---------- 355
           +F++M+  G + +    N L+ G L    WEE           DL  D +          
Sbjct: 387 VFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLC 446

Query: 356 ---------QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
                     +F+ M +K        YGI++   GK     E    L+  +  G  P   
Sbjct: 447 KNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHR 506

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
            FN VI A      ID+ + +   M +    P+  +Y  LI  L +L +  DA   +   
Sbjct: 507 IFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQM 566

Query: 467 LKQGVIP 473
           + +GV P
Sbjct: 567 INEGVTP 573



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 195/401 (48%), Gaps = 5/401 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + + E + IF  +K+ G + +V  +  L+ AL  L   + AV  F++  + G+ PN+ 
Sbjct: 517 KRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNV 576

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ ++   C  + + +  ++   M + G  P++  F  ++ +LCK GR+ EA  ++D M
Sbjct: 577 VFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM 636

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G KP++ +YN L+ G C+  R++EA ++L  + + GLKP++ +Y  ++ G+CK GR 
Sbjct: 637 VCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRI 696

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A  L  E + +GVTP V T+NT+ NG  + G   +   L   M K   L    +YS +
Sbjct: 697 DNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSII 756

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+G  K      A  IF+ +     ++D    N ++ GL  K   +    EDA  +F  +
Sbjct: 757 LDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGL-FKGGRK----EDAMDLFAAI 811

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                V    TY ++   L +    +E         + G  P +   N +I+ L   G+I
Sbjct: 812 PANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEI 871

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
            +A   L  + E       ++  MLI+   + E    A +L
Sbjct: 872 PRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSL 912



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 186/408 (45%), Gaps = 6/408 (1%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           + +D    P +L     +D + KA  +     +F  +   G   +   +N L+   +   
Sbjct: 355 QMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTG 414

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           + E  V+   E S++ L P+ +T+ +++   C      EAR + D M   G  P+VT + 
Sbjct: 415 QWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYG 474

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           I+++   K G L E  ++L+ M   G  PN + +N ++        ++E   + + +K  
Sbjct: 475 IMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQ 534

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           GL P+V TY  ++D  CK+GR ++A+   N+ I  GVTPN V FN+L  G C      K 
Sbjct: 535 GLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKV 594

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             L   M  +   PD + ++T+L  L K G++  A  +   MV  G + D    N+L+ G
Sbjct: 595 EELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDG 654

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
            C  S      +++A ++ + M       +  +Y  ++    K  + D A       +  
Sbjct: 655 HCFASR-----MDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRK 709

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           G  P   T+N ++  L   G+  +A  L   M +  K+ S  +Y +++
Sbjct: 710 GVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIIL 757


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 182/357 (50%), Gaps = 6/357 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+APN   F+I+I  Y       +A  + + M + G  P+  TF  +++SLC+ GRL +A
Sbjct: 418 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 477

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN-DGLKPDVYTYTAVMD 233
           L   + M  IG  P+   Y CL++G C  G + +A E++  + N D   P V  ++++++
Sbjct: 478 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 537

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             CK GR  E  ++++  ++ G  PNVVTFN+L  GYC  G   +   LL  M      P
Sbjct: 538 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 597

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           +   Y TL++G  K G+I  A+++F++M+  G +    + + +L GL      +      
Sbjct: 598 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF-----QARRTTA 652

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A ++F +M +  +     TYG+V+  L +   TDEA + L     M      ITFN VI 
Sbjct: 653 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 712

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           A+   G+  +A  L   +  +  +P+  +Y M+IT L + E   +A  L+ +  K G
Sbjct: 713 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 769



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 184/426 (43%), Gaps = 43/426 (10%)

Query: 87  DFN-DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           DF+  L+   V   E + A   F E    G+ P     + +I+  C   +  +A  ++  
Sbjct: 211 DFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQK 270

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M D+G  P++ T++++++ LCKS  + +A  VL+QM   G +PN  TYN L+ G    G 
Sbjct: 271 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGM 330

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA--------------------- 244
             E+  +   + + G+ P V    + +    K GR+NEA                     
Sbjct: 331 WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYST 390

Query: 245 -----------------MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
                              + N  + +G+ PN   FN L N Y + G   K + + + M+
Sbjct: 391 NASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQ 450

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            +  +PD ++++T+++ L + G++  A+  F  MV  G    E +   L++G C      
Sbjct: 451 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC----NH 506

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
            +L++    + E M K +       +  +I  L K  +  E    +   ++ G  P  +T
Sbjct: 507 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 566

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           FN++++  C  G +++A  LL  M      P+   Y  L+    +  +  DA  ++   L
Sbjct: 567 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 626

Query: 468 KQGVIP 473
            +GV P
Sbjct: 627 HKGVKP 632



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 155/330 (46%), Gaps = 3/330 (0%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P   T++I+I CY   +       ++  +  NG  P+  +++ L+    K G + +A  +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
             +M   G  P I   N ++K LC +  +++A  ++  + + G+ PD++TY+ ++DG CK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
               ++A  +L + +E G  PN +T+N+L +GY   G   + V + K M     +P   +
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
            ++ ++ L K G+   A  IF  MV  G + D    ++    +C   W    +    + +
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCY--WYVTVVWVMWHNI 410

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           F  M  K    +   + I+I    +    D+A++        G IP T+TF  VI +LC 
Sbjct: 411 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 470

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            G++D AL     M +    PS   Y  LI
Sbjct: 471 IGRLDDALHKFNHMVDIGVPPSEAVYGCLI 500



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 7/264 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P    FS +I   C +    E + ++D M   G  PNV TF  L+   C  G ++EA  +
Sbjct: 527 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 586

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           LD M  IG +PN   Y  L+ G C  GR+++A  +  ++ + G+KP    Y+ ++ G  +
Sbjct: 587 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 646

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             R+  A ++ +E IE G T ++ T+  +  G C+     +   LL+ +   N   D I+
Sbjct: 647 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 706

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEEKDLLEDAYQ 356
           ++ +++ + K G+ + A  +F  +  +G   + +  + ++  L   +S+EE D       
Sbjct: 707 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEAD------N 760

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTL 380
           +F  + K    +D      ++R L
Sbjct: 761 LFISVEKSGHASDSRLLNHIVRML 784



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 109/230 (47%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN  TF+ ++  YC   +  EA  ++D M   G  PN   +  LV+  CK+GR+ +A
Sbjct: 559 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 618

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L V   M   G KP    Y+ +L GL    R   A +M   +   G    ++TY  V+ G
Sbjct: 619 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 678

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            C+   ++EA  LL +     V  +++TFN + +   K G   +   L   +     +P+
Sbjct: 679 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 738

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
             +YS ++  L+K      A ++F  + + G   D R++N ++R L  K+
Sbjct: 739 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 788



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 4/246 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  DI D + + G   +V  FN L+    ++   E A       +S G+ PN +
Sbjct: 541 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 600

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  ++  YC      +A  V   M   G  P    ++I+++ L ++ R   A ++  +M
Sbjct: 601 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 660

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +I TY  +L GLC     +EA  +L  +    +K D+ T+  V+    KVGR 
Sbjct: 661 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 720

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA EL +     G+ PN+ T++ +     KE +  +   L   ++K     D    S L
Sbjct: 721 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD----SRL 776

Query: 302 LNGLLK 307
           LN +++
Sbjct: 777 LNHIVR 782



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 8/224 (3%)

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
           A  R   P + T+N L + Y +   P  G+ ++  + K    PD  SYS L+ G +K G+
Sbjct: 167 ACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGE 225

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           +  A  +F EM+  G      + NS+++ LC MK       ++ A  + +KM       D
Sbjct: 226 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKE------MDKAESIVQKMVDSGIAPD 279

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY ++I  L K K  D+A   L   +E G  P +IT+N++I      G  ++++ +  
Sbjct: 280 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 339

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M     IP+  + +  I  L +  ++ +A  ++ + + +G  P
Sbjct: 340 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKP 383


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 194/413 (46%), Gaps = 6/413 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K+ + +F  +   G   + + +N L+  L    +   A+  + + +  G+ P   T+  +
Sbjct: 369 KDAVSLFKEMADSGIPDAFT-YNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           + CYC      EA K+   M   G+ PNV T+T L+          +A  +L +M + G 
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
             N  TYN L+ GLC VGRV E  EML   + +G  P   TY ++++GF K G    A  
Sbjct: 488 SCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFA 547

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           +  +   +G+ PN+VT+ +  +GYCK       + +L  ++ +   PD  +Y++L+ G  
Sbjct: 548 VYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFC 607

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           + G +  A+ +   M++ G   +  + NS + G     ++   ++E+A +++EKM K+  
Sbjct: 608 QEGNMSHALQVLVLMLKDGLLPNISVYNSFITG-----YKNLKMMEEALRLYEKMIKEGI 662

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY  +I    K      AL      +  G+IP  ITF  +   LC  G ID A  
Sbjct: 663 DLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARK 722

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           LL  M      P+   Y+MLI    +  K  +A  L+   L++ ++P     D
Sbjct: 723 LLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYD 775



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 192/382 (50%), Gaps = 5/382 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E +++++ + + G    +  ++ LL+   +    + AVK ++E    G  PN  T++ 
Sbjct: 402 IREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTT 461

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++ + NK  F +A  ++  M  NG   N  T+  L+N LC  GR+ E  E+L +    G
Sbjct: 462 LMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEG 521

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P   TYN ++ G    G +  A+ +   +   G+ P++ TYT+ +DG+CK    + A+
Sbjct: 522 FVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLAL 581

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++LN+   +G+ P++  +N+L  G+C+EG     + +L LM K   LP+   Y++ + G 
Sbjct: 582 KMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGY 641

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
                +  A+ ++++M++ G ++D     +L+ G     + +   +  A +++ +M  K 
Sbjct: 642 KNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDG-----FSKDGNVTFALKLYSEMVAKG 696

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           ++ D  T+  +   L +    D+A   L     +   P  + +N +I      GK+ +A 
Sbjct: 697 NIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAF 756

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
            L   M E   +P  T+YD+L+
Sbjct: 757 RLHDEMLERKIMPDDTTYDILV 778



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 161/376 (42%), Gaps = 6/376 (1%)

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           S++  G         DLL           A+   +E    G   ++W F +++R    + 
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
            + +A ++ D M  +   P+    ++ + SLCK      AL VL +M   G  P   T+N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            ++  L   GR+EEA  +   +   G K  V   T +M G+C      +A+++  E +  
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           G+ P  VT+  L  G  +EG P K   L + M+    LP    ++ ++ GLL     + A
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           VS+FKEM   G   D    N L+  LC     ++  + +A  ++EKM +        TY 
Sbjct: 372 VSLFKEMADSGIP-DAFTYNILIHWLC-----QRRKIREALNLWEKMNETGVKPYIVTYH 425

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            ++         DEA+         G  P  +T+  +++    +   DKA  LL  M ++
Sbjct: 426 SLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQN 485

Query: 435 AKIPSRTSYDMLITKL 450
               +  +Y+ LI  L
Sbjct: 486 GVSCNDYTYNTLINGL 501



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 112/261 (42%), Gaps = 36/261 (13%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++   +      +A   + +  + G+ PN  T++  I  YC  +    A K+++ + 
Sbjct: 529 YNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVR 588

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P++  +  L+   C+ G +  AL+VL  M + G  PNI  YN  + G   +  +E
Sbjct: 589 CKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMME 648

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG------------ 255
           EA  +   +  +G+  D  TYT ++DGF K G    A++L +E + +G            
Sbjct: 649 EALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALT 708

Query: 256 -----------------------VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                                  + PNV+ +N L NGY + G   +   L   M +R  +
Sbjct: 709 HGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIM 768

Query: 293 PDKISYSTLLNGLLKWGKIRP 313
           PD  +Y  L+ G+   G   P
Sbjct: 769 PDDTTYDILV-GMKSLGSDSP 788



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 107/258 (41%), Gaps = 44/258 (17%)

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           ++  G   D + +  VM    K G  ++A+ L +E     + P+    +      CK   
Sbjct: 168 MRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             + + +L+ M+    +P   +++++++ L+K G++  A+ I  E++  G ++   +  +
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+ G C++    K     A  +FE+  +                                
Sbjct: 288 LMHGYCLQREVRK-----ALDIFEETLRD------------------------------- 311

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL--DQL 453
               G +P  +T+  +I+    EG  +KA  L   M +H  +PS   ++M+I  L  D+L
Sbjct: 312 ----GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKL 367

Query: 454 EKSYDACALYGAALKQGV 471
            K  DA +L+      G+
Sbjct: 368 WK--DAVSLFKEMADSGI 383


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 201/408 (49%), Gaps = 10/408 (2%)

Query: 47  ENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAV 105
           E P S+     VD + KA      ++ ++ +       ++  +  L+  L   ++ E A 
Sbjct: 102 EAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERAC 161

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
             F E    G  P+   +S +I          EARK++D M   G  P    +T +V  L
Sbjct: 162 DVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGL 221

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK GR++EA++ + +M R   +P + TY+ ++ G   +G+VEEA+ ++  + +    PD 
Sbjct: 222 CKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDT 281

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            +YT  ++    +GR  EA ++    +E+G  P++ T+  + + +CKEG+      +L+L
Sbjct: 282 ISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRL 341

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKS 344
           M K    P++  Y+ +++G +K  ++  A+ +++ +++ G        N+++  LC +K 
Sbjct: 342 MDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKK 401

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
            +E      A ++  +M ++    +P   TY ++I  LGK    + A   L   I+ G I
Sbjct: 402 MDE------ALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVI 455

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           P   T+ ++IQ L G GK+ +A+ LL  M +    P   +Y  L+  L
Sbjct: 456 PDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQIL 503



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 196/467 (41%), Gaps = 80/467 (17%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND------FF 137
           +VS FN LL      ++ E       E  + G+  N  T  +++   C + D      +F
Sbjct: 28  NVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSYF 87

Query: 138 EARKVIDC-MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            +R    C +F+    P+  T+T +V+ L K+G     LE  ++M    C+P + TY  L
Sbjct: 88  NSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVL 147

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           + GLC   +VE A ++   +   G KPD+  Y++++DG  K GR +EA +L++  I RG 
Sbjct: 148 VDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGP 207

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGV-----------------------------------G 281
            P  V + ++  G CK G   + V                                    
Sbjct: 208 PPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFA 267

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR---------FGFEVDE-- 330
           +++ M  R+C PD ISY+  +  L   G+   A  +F+ MV          +G  +D   
Sbjct: 268 VMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFC 327

Query: 331 ------------RMM-------NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
                       R+M       N  +  + M  + +   LE+A ++++++ K   +    
Sbjct: 328 KEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTV 387

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-----PRTITFNNVIQALCGEGKIDKALL 426
           TY  VI  L K KK DEAL  L    EM        P  +T++ +I  L   G  ++A  
Sbjct: 388 TYNTVINALCKLKKMDEALELLR---EMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFD 444

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LL  M ++  IP   +Y  LI  L    K   A  L    LK G+ P
Sbjct: 445 LLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFP 491



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 182/393 (46%), Gaps = 15/393 (3%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N LL+ALV   +   A+ FF  + S    PN  +F+I++R +  ++DF     ++  M  
Sbjct: 1   NSLLLALVRGGQLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVVNALLREMKA 57

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK-------PNIQTYNCLLKGLC 201
            G   N  T  +++++LC    L +A+   +      C+       P+  TY  ++ GL 
Sbjct: 58  RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLF 117

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G  +   E    +     +P + TYT ++DG CK  +   A ++  E I +G  P+++
Sbjct: 118 KAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDII 177

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            +++L +G  K G   +   L+ LM  R   P  ++Y++++ GL K G+I+ AV   +EM
Sbjct: 178 AYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEM 237

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
            R          + ++ G     +     +E+A+ V E+M  +    D  +Y + I  L 
Sbjct: 238 RRRRLRPRVDTYSFIVTG-----YIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALY 292

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
              + +EA       +E G  P   T+  +I   C EG +  A  +L LM + A  P+R 
Sbjct: 293 SIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRY 352

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            Y M++    +  +  +A  LY   LK G++P 
Sbjct: 353 IYTMIMDGFVKSSRLEEALELYQRILKDGILPS 385



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 162/352 (46%), Gaps = 8/352 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E   + D +   G   +   +  ++  L      + AVK   E     L P   
Sbjct: 188 KAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD 247

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S ++  Y       EA  V++ M D    P+  ++T+ + +L   GR +EA +V + M
Sbjct: 248 TYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETM 307

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GCKP++ TY  ++   C  G +  A  +L  +    +KP+ Y YT +MDGF K  R 
Sbjct: 308 VEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRL 367

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR--NCLPDKISYS 299
            EA+EL    ++ G+ P+ VT+NT+ N  CK     + + LL+ M++R     P  ++YS
Sbjct: 368 EEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYS 427

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            +++GL K G    A  +  EM+  G   D     SL++ L       +     A ++ E
Sbjct: 428 MIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSR-----AMELLE 482

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           +M K     D  TYG +++ L +    D A   L   +  GH P   TF  V
Sbjct: 483 EMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAV 533



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 128/256 (50%), Gaps = 4/256 (1%)

Query: 49  PRSLQAQRFVDRIKASPLKERID-IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++    F++ + +   +E  + +F+++ + G    +  +  ++           A   
Sbjct: 279 PDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHV 338

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
                   + PN + +++++  +   +   EA ++   +  +G  P+  T+  ++N+LCK
Sbjct: 339 LRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCK 398

Query: 168 SGRLKEALEVLDQMGRIG--CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
             ++ EALE+L +M R     +P+I TY+ ++ GL  VG  E A+++L  + ++G+ PD 
Sbjct: 399 LKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDC 458

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           +TYT+++      G+ + AMELL E ++ G+ P+  T+ TL    C+         LL+ 
Sbjct: 459 FTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSDVD-AAWDLLQE 517

Query: 286 MKKRNCLPDKISYSTL 301
           M +    P++ ++  +
Sbjct: 518 MMRNGHTPNEFTFKAV 533


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 207/421 (49%), Gaps = 20/421 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++  ++    ++K G   +   +N L+   V L + E A       S  G+  N  
Sbjct: 78  KAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKV 137

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T +++I+ YC +    EA KV+  M  ++G   +   +  L++  CK G++ +A+ V D+
Sbjct: 138 TLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDE 197

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M ++G K N+   N L+ G C  G+V E   +LM ++   LKPD Y+Y  ++DG+C+ G 
Sbjct: 198 MLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGL 257

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           S++A  + ++ + +G+ P VVT+NTL  G C+ G     + L  LM +R   P+++ Y T
Sbjct: 258 SSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCT 317

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LL+GL K G    A++++ +++  G        N+++ GLC K  E    ++ A + F++
Sbjct: 318 LLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLC-KMGE----MDGAKETFKR 372

Query: 361 MTKKVSVTDPGTYGIVIRTLGKG----KKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           M +     D    GI  RTL  G       +EA        +    P    +N++I  L 
Sbjct: 373 MEELGCKPD----GITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLF 428

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK-LDQ--LEKSYDACALYGAALKQGVIP 473
              KI K + LL  M      P+  +Y  LI    DQ  L+K++ A   Y   + +G  P
Sbjct: 429 TSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSA---YFEMIGKGFAP 485

Query: 474 Q 474
            
Sbjct: 486 N 486



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 183/382 (47%), Gaps = 6/382 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K  + +FD++ K G   S+   N LL  LV   E  +AV  + +     + P+ +T +I
Sbjct: 12  VKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAI 71

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           M+  YC       A + +  M   G+  N  ++  LV+     G ++ A  VL  M   G
Sbjct: 72  MVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKG 131

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-KNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
              N  T   L+KG C   +VEEA ++L  + K DG+  D Y Y A++DG+CKVG+  +A
Sbjct: 132 VMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDA 191

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           + + +E ++ G+  N+   N+L NGYCK G   +G  LL  M+K +  PD  SY TL++G
Sbjct: 192 IRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDG 251

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             + G    A ++  +M+R G E      N+LL+GLC +  + K    DA +++  M ++
Sbjct: 252 YCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLC-RFGDYK----DALRLWHLMLQR 306

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               +   Y  ++  L K      AL      +  G       FN +I  LC  G++D A
Sbjct: 307 GVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGA 366

Query: 425 LLLLFLMYEHAKIPSRTSYDML 446
                 M E    P   +Y  L
Sbjct: 367 KETFKRMEELGCKPDGITYRTL 388



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 204/471 (43%), Gaps = 37/471 (7%)

Query: 37  LSTAESLDLKENPRSLQAQRFVDRIKASPLKER-IDIFDSIKKDGTNWSVSDFNDLLMAL 95
           L     LDLK  P S      VD      L  +  ++ D + + G   +V  +N LL  L
Sbjct: 230 LMCMRKLDLK--PDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGL 287

Query: 96  VMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV 155
               + + A++ +      G+ PN   +  ++       DF  A  + D +   G + ++
Sbjct: 288 CRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSI 347

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
             F  ++N LCK G +  A E   +M  +GCKP+  TY  L  G C VG VEEA+++   
Sbjct: 348 YAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEK 407

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           ++ + + P +  Y +++ G     + ++ ++LL E   RG++PNVVT+  L  G+C +G 
Sbjct: 408 MEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGR 467

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM-- 333
             K       M  +   P+ I  S +++ L + G+I  A  + ++MV F   +D R +  
Sbjct: 468 LDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLED 527

Query: 334 --NSLLRGLCMKSWEEKDLLE----------------------------DAYQVFEKMTK 363
             N+ +R L    W+  D L+                            DA + F  ++ 
Sbjct: 528 FQNADIRKL--DCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSH 585

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
                D  TY  +I         +EA       +  G +P   T+N ++  LC  G +D+
Sbjct: 586 GSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDR 645

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           A  L   ++    IP+  +Y++LI    +     +A  L G  LK+G+ P 
Sbjct: 646 ARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPS 696



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 164/352 (46%), Gaps = 5/352 (1%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           K+DG       +  L+     + +   A++   E    GL  N +  + +I  YC     
Sbjct: 164 KEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQV 223

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            E  +++ CM      P+  ++  LV+  C+ G   +A  V DQM R G +P + TYN L
Sbjct: 224 HEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTL 283

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           LKGLC  G  ++A  +   +   G+ P+   Y  ++DG  K+G  + A+ L ++ + RG+
Sbjct: 284 LKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGI 343

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
             ++  FNT+ NG CK G         K M++  C PD I+Y TL +G  K G +  A  
Sbjct: 344 NKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFK 403

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           I ++M +        M NSL+ GL   S +   L++    +  +M  +    +  TYG +
Sbjct: 404 IKEKMEKEEIFPSIEMYNSLIVGL-FTSKKISKLID----LLAEMDTRGLSPNVVTYGAL 458

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           I       + D+A       I  G  P  I  + ++ +L   G+ID+A +LL
Sbjct: 459 IAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLL 510



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 35/296 (11%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+  +N L++ L    +    +   +E  + GL+PN  T+  +I  +C++    +A    
Sbjct: 416 SIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAY 475

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM--------------------GR 183
             M   G+ PNV   + +V+SL + GR+ EA  +L +M                     +
Sbjct: 476 FEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRK 535

Query: 184 IGC---------------KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           + C                PN   YN  + GLC  G+V +A    + + +    PD +TY
Sbjct: 536 LDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTY 595

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
             ++ GF   G  NEA  L +E + +G+ PN+ T+N L NG CK G   +   L   +  
Sbjct: 596 CTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHL 655

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           +  +P+ ++Y+ L++G  K G  R A+ +  +M++ G        +SL+ G C +S
Sbjct: 656 KGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQS 711



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 170/402 (42%), Gaps = 40/402 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K       + ++D I   G N S+  FN ++  L  + E + A + F      G  P+  
Sbjct: 324 KMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGI 383

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +   YC   +  EA K+ + M      P++  +  L+  L  S ++ + +++L +M
Sbjct: 384 TYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEM 443

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN+ TY  L+ G C  GR+++A+     +   G  P+V   + ++    ++GR 
Sbjct: 444 DTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRI 503

Query: 242 NEAMELLNEAIERGVT-----------------------------------PNVVTFNTL 266
           +EA  LL + ++  +                                    PN V +N  
Sbjct: 504 DEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIA 563

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             G CK G           +   +  PD  +Y TL++G    G +  A ++  EMV  G 
Sbjct: 564 MAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGL 623

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             +    N+LL GLC   +     L+ A ++F+K+  K  + +  TY I+I    K    
Sbjct: 624 VPNITTYNALLNGLCKSGY-----LDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSP 678

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            EAL      ++ G  P  IT++++I   C +  +++A+ LL
Sbjct: 679 REALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLL 720



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 164/348 (47%), Gaps = 6/348 (1%)

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           ++++ Y  K     A  V D M   G  P++ +   L+++L K G    A+ V DQM R+
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
              P++ T   ++   C  G+VE A E +  ++  G + +  +Y +++DG+  +G    A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN-CLPDKISYSTLLN 303
             +L    E+GV  N VT   L  GYCK+    +   +L+ M+K +  + D+ +Y  L++
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           G  K GK+  A+ +  EM++ G +++  + NSL+ G C     +   + +  ++   M K
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYC-----KNGQVHEGERLLMCMRK 235

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
                D  +Y  ++    +   + +A       +  G  P  +T+N +++ LC  G    
Sbjct: 236 LDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKD 295

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           AL L  LM +    P+   Y  L+  L ++     A  L+   L +G+
Sbjct: 296 ALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGI 343



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 118/230 (51%), Gaps = 19/230 (8%)

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
           W ++D  D           E+A+KF          PN+  ++I +   C      +AR+ 
Sbjct: 539 WKIADTLD-----------ESAIKFS--------LPNNVVYNIAMAGLCKSGKVNDARRF 579

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
              +    + P+  T+  L++    +G + EA  + D+M   G  PNI TYN LL GLC 
Sbjct: 580 FLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCK 639

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            G ++ A  +   +   GL P+V TY  ++DG+CK G   EA++L  + ++ G++P+++T
Sbjct: 640 SGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIIT 699

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           +++L NG+CK+    + + LL  MK  N      ++S L+ G ++ G ++
Sbjct: 700 YSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVK 749



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 91/169 (53%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           PN   + I +  LCKSG++ +A      +      P+  TY  L+ G    G V EA+ +
Sbjct: 555 PNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNL 614

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              + N GL P++ TY A+++G CK G  + A  L ++   +G+ PNVVT+N L +GYCK
Sbjct: 615 RDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCK 674

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            G+P + + L   M K    P  I+YS+L+NG  K   +  A+ +  EM
Sbjct: 675 SGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEM 723



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 3/218 (1%)

Query: 72  IFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
           I D++ +    +S+ +   +N  +  L    +   A +FF   S     P+++T+  +I 
Sbjct: 541 IADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIH 600

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
            +       EA  + D M + G  PN+TT+  L+N LCKSG L  A  + D++   G  P
Sbjct: 601 GFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIP 660

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N+ TYN L+ G C  G   EA ++   +  +G+ P + TY+++++GFCK     EAM+LL
Sbjct: 661 NVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLL 720

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           NE     V   + TF+ L  G  + G   K   L  +M
Sbjct: 721 NEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMM 758



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 144/309 (46%), Gaps = 6/309 (1%)

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           + G +K AL V D MG+ G KP++++ N LL  L   G    A  +   ++   + PDV+
Sbjct: 8   EKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVF 67

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T   +++ +CK G+   A+E + E  + G   N V++N+L +GY   G      G+LK M
Sbjct: 68  TCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFM 127

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-GFEVDERMMNSLLRGLCMKSW 345
            ++  + +K++ + L+ G  K  K+  A  + +EM +  G  VDE    +L+ G C    
Sbjct: 128 SEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYC---- 183

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            +   + DA +V ++M K     +      +I    K  +  E    L    ++   P +
Sbjct: 184 -KVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDS 242

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
            ++  ++   C +G   KA  +   M      P+  +Y+ L+  L +     DA  L+  
Sbjct: 243 YSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHL 302

Query: 466 ALKQGVIPQ 474
            L++GV P 
Sbjct: 303 MLQRGVTPN 311



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 72/146 (49%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + E  ++ D +   G   +++ +N LL  L      + A + F +    GL PN  T
Sbjct: 605 AGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVT 664

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I  YC      EA  +   M   G  P++ T++ L+N  CK   ++EA+++L++M 
Sbjct: 665 YNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMK 724

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEE 208
                  I T++ L++G    G V++
Sbjct: 725 ASNVDQTIATFSKLVEGCIQHGDVKK 750


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 207/444 (46%), Gaps = 41/444 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LKE +D+   ++  G   +    N +++    +   E A   F E S+ G+ P+S T+  
Sbjct: 190 LKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKY 249

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC   +  EA + I  M + G+  +  T T+++ + C+   +  A+    ++ ++G
Sbjct: 250 IIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMG 309

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+  Y+ ++ GLC  G V++A+E+L  +  +G KP+VYT+T+++ G CK G +  A 
Sbjct: 310 LSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAF 369

Query: 246 ELLNEAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            L  + I      PNV T+  + +GYCKE    +   L + MK++  +P+  +Y+TL++G
Sbjct: 370 RLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDG 429

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             K G    A  + + M   GF  +    NS++ GLC     ++   E+A+++     + 
Sbjct: 430 HCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLC-----KRGRAEEAFKLLNTGFQN 484

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEAL--------------IHLH---------------- 394
               D  TY I+I    K    ++AL              IHL+                
Sbjct: 485 QIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDS 544

Query: 395 -----HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
                  I++G  P   T+ ++I   C E K+  A+     M +H   P   SY  LI+ 
Sbjct: 545 EKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISG 604

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
           L +  +  +A  LY   + +G+ P
Sbjct: 605 LCKESRLDEARQLYDTMIDKGLSP 628



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 166/358 (46%), Gaps = 6/358 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
            F  + K G + ++ +++ ++  L      + A +   E    G  PN +T + +I   C
Sbjct: 301 FFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLC 360

Query: 132 NKNDFFEA-RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
            K     A R  +  +  + Y PNV T+T +++  CK  +L  A  + ++M   G  PN 
Sbjct: 361 KKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNT 420

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  L+ G C  G   +AYE++  + N+G  P+  TY +++DG CK GR+ EA +LLN 
Sbjct: 421 NTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNT 480

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             +  +  + VT+  L +  CK     + +  L  M K    PD   Y+TL+    +   
Sbjct: 481 GFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNM 540

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           ++ +  +F E+++ G    +    S++ G C    E+K  L  A + F+KM+      D 
Sbjct: 541 MKDSEKLFDEVIKLGLAPTKETYTSMICGYCR---EKKVSL--AVKFFQKMSDHGCAPDS 595

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            +YG +I  L K  + DEA       I+ G  P  +T   +    C       A+++L
Sbjct: 596 ISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVIL 653



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 164/373 (43%), Gaps = 44/373 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNS 120
           K   +K+  ++ + + K+G   +V     L+  L      E A + F +   S    PN 
Sbjct: 326 KRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNV 385

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ MI  YC +     A  + + M + G  PN  T+T L++  CK+G   +A E+++ 
Sbjct: 386 HTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMEL 445

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML-----MNVKNDGL-------------- 221
           M   G  PN  TYN ++ GLC  GR EEA+++L       ++ DG+              
Sbjct: 446 MSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRAD 505

Query: 222 ----------------KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
                           +PD++ YT ++  FC+     ++ +L +E I+ G+ P   T+ +
Sbjct: 506 MNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTS 565

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +  GYC+E      V   + M    C PD ISY  L++GL K  ++  A  ++  M+  G
Sbjct: 566 MICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKG 625

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
               E    +L    C     + +    A  + E++ KK+ +    T   +IR L   KK
Sbjct: 626 LSPCEVTRVTLTYEYC-----KTEDFASAMVILERLNKKLWIR---TVHTLIRKLCCEKK 677

Query: 386 TDEALIHLHHAIE 398
              A +  H  ++
Sbjct: 678 VALAALFFHKLLD 690



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 188/426 (44%), Gaps = 38/426 (8%)

Query: 64  SPLKERID-IFDS-IKKDGTNWSVSDFNDLLMALVMLNEQE-TAVKFFS--EASSYGLAP 118
           SPLK+    + D+ +++    +S S  N  + A  + +EQ  +AV   +  E S   L+ 
Sbjct: 81  SPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSF 140

Query: 119 NSWT-----FSIMIRCY-------CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
             W      F   +R Y         K +   A +V++CM               V    
Sbjct: 141 FYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECM---------------VGVFA 185

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           + G+LKEA++++  M   G     +  N ++     +  VE A  +   +   G+ PD  
Sbjct: 186 EIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSC 245

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY  ++ G+C+ G   EA   + E +ERG   +  T   +   +C++    + V     +
Sbjct: 246 TYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKV 305

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            K    P+ I+YS++++GL K G ++ A  + +EMV+ G++ +     SL+ GLC K W 
Sbjct: 306 TKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWT 365

Query: 347 EKDLLEDAYQVFEKMTKKVSVT-DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
           E+     A+++F K+ +  +   +  TY  +I    K +K   A +      E G +P T
Sbjct: 366 ER-----AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNT 420

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
            T+  +I   C  G   KA  L+ LM      P+  +Y+ ++  L +  ++ +A  L   
Sbjct: 421 NTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNT 480

Query: 466 ALKQGV 471
             +  +
Sbjct: 481 GFQNQI 486



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 12/153 (7%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           ++ K + + + +   + + K G    +  +  L+ A    N  + + K F E    GLAP
Sbjct: 499 EQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAP 558

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
              T++ MI  YC +     A K    M D+G  P+  ++  L++ LCK  RL EA ++ 
Sbjct: 559 TKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLY 618

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
           D M   G  P            C V RV   YE
Sbjct: 619 DTMIDKGLSP------------CEVTRVTLTYE 639


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 177/343 (51%), Gaps = 29/343 (8%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C   D   A+ ++  M D G  PNV T+T L++ LCK+ R  +A++ + +M
Sbjct: 12  TYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRM 71

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R GC+P++ TYN L+ GLC   R+++A  +L  +  +G  P+  TY+ ++   C+  R 
Sbjct: 72  LRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRL 131

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGY-----------CKEGTPMKGVGLLKLMKKRN 290
           ++A  L+ E I RG   N+V +     G+           C++G  M   G         
Sbjct: 132 DQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGR-------- 183

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
            +PD ++Y+T ++GL K GK+   + + +EM R G   D     S++ GLC     + + 
Sbjct: 184 -IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLC-----KANR 237

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK---TDEALIHLHHAIEMGHIPRTIT 407
           ++DA+QVF+ M ++  V D  TY I++  L +  +    DE L H+  A++ G +    T
Sbjct: 238 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHM-QAMKAGCVMEVYT 296

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            N  I ALC  GK   A  +L  M E   +P+  SY+ +I  L
Sbjct: 297 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGL 339



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 167/355 (47%), Gaps = 44/355 (12%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D + + G    V  +N  +  L    + +  ++   E    G+ P+  TF  +I   C  
Sbjct: 176 DEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKA 235

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG--RIGCKPNIQ 191
           N   +A +V   M + G  P+  T++I++++L ++ RL    EVL+ M   + GC   + 
Sbjct: 236 NRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVY 295

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+N  +  LC  G+   A  +L+ +   G  P++ +Y  V+DG CK G  ++A +L  + 
Sbjct: 296 THNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM 355

Query: 252 IERGVT-PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN-CLPDKISYSTLLNGLLKWG 309
           ++ G   P+V+ FNTL +G+CK G   +   LL  MK +N C+PD ++Y+TL++G  K+G
Sbjct: 356 LDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFG 415

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            ++ A  + +EM   G + +     +L+ G     + +  + E+A  +F++M+ K     
Sbjct: 416 SLKQAKLLLQEMQAVGCKPNVVTYAALING-----YAKHGMYEEAESLFDEMSAK----- 465

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
                                         G  P  IT+N V+ A    G + KA
Sbjct: 466 ------------------------------GCFPDIITYNTVLSAFSKAGMMSKA 490



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 187/432 (43%), Gaps = 46/432 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA    + I     + + G    +  +N L+  L M N  + A     E    G APN  
Sbjct: 57  KARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHI 116

Query: 122 TFSIMIRCYCNKNDFFEARKV----------------IDCMF------------------ 147
           T+S ++   C +    +AR +                IDC+F                  
Sbjct: 117 TYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGD 176

Query: 148 ---DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
              ++G  P+V T+   ++ LCK+G+L + LE+L++M R G  P++ T+  ++ GLC   
Sbjct: 177 EMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKAN 236

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN--EAIERGVTPNVVT 262
           R+++A+++   +   G  PD  TY+ ++D   +  R +   E+L   +A++ G    V T
Sbjct: 237 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYT 296

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
            N      C+ G       +L  M +   LP+ +SY+ +++GL K G +  A  + ++M+
Sbjct: 297 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 356

Query: 323 RFG-FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM-TKKVSVTDPGTYGIVIRTL 380
             G  + D    N+L+ G C     +   L  A+Q+  +M  K + V D  TY  +I   
Sbjct: 357 DSGCCKPDVIFFNTLISGFC-----KAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQ 411

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K     +A + L     +G  P  +T+  +I      G  ++A  L   M      P  
Sbjct: 412 SKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDI 471

Query: 441 TSYDMLITKLDQ 452
            +Y+ +++   +
Sbjct: 472 ITYNTVLSAFSK 483



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 168/353 (47%), Gaps = 9/353 (2%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +  +G + SV  +  L+  L    + + A     + +  G APN  T++ +I   C    
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             +A + +  M  +G  P++ T+  L++ LC + R+ +A  VL ++ R G  PN  TY+ 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL--NEAIE 253
           L+   C   R+++A  ++  +   G   ++  Y   + GFC+    +   E    +E IE
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
            G  P+VVT+NT  +G CK G   KG+ +L+ M +    PD +++ ++++GL K  +I  
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT--KKVSVTDPG 371
           A  +FK M+  G   D     SL   + + +    + L+   +V E M   K   V +  
Sbjct: 241 AFQVFKGMLERGCVPD-----SLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVY 295

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           T+   I  L +  K   A   L   IE G +P  +++N VI  LC  G +D A
Sbjct: 296 THNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDA 348



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 169/364 (46%), Gaps = 17/364 (4%)

Query: 49  PRSLQAQRFVDRIKASPLKERIDIFDSI------KKDGTNWSVSDFNDLLMALVMLNEQE 102
           P SL     +D +  +    R+D  D +       K G    V   N  + AL    +  
Sbjct: 255 PDSLTYSIMLDNLSRA---NRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFP 311

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY-HPNVTTFTIL 161
            A          G  PN  +++ +I   C   +  +A K+   M D+G   P+V  F  L
Sbjct: 312 LAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTL 371

Query: 162 VNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           ++  CK+GRL +A ++L +M  +  C P++ TYN L+ G    G +++A  +L  ++  G
Sbjct: 372 ISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVG 431

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
            KP+V TY A+++G+ K G   EA  L +E   +G  P+++T+NT+ + + K G   K  
Sbjct: 432 CKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAE 491

Query: 281 GLLKLMKKRN--CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
           G+ + +K +   C PD I+Y  L++G  +       +++ +EM   G+  D    N L+ 
Sbjct: 492 GVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLI- 550

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
               K  E +++   A  V+++M  +  V     +  ++R   +    + A   +    E
Sbjct: 551 ---AKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNE 607

Query: 399 MGHI 402
            GH+
Sbjct: 608 KGHL 611



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 7/257 (2%)

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +G    V TYT ++DG CK G  + A  LL +  + G  PNVVT+  L +G CK   P  
Sbjct: 4   NGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHD 63

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            +  +K M +  C PD ++Y++L++GL    ++  A  + +E+VR GF  +    ++L+ 
Sbjct: 64  AIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVI 123

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL--GKGKKTDEALIHLHHA 396
             C +       L+ A  +  +M  + SV +   Y   I      + + +          
Sbjct: 124 WNCRRRR-----LDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEM 178

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           IE G IP  +T+N  I  LC  GK+DK L +L  M      P   ++  +I+ L +  + 
Sbjct: 179 IESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRI 238

Query: 457 YDACALYGAALKQGVIP 473
            DA  ++   L++G +P
Sbjct: 239 DDAFQVFKGMLERGCVP 255



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 6/254 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLA-PNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           FN L+           A +   E  +  +  P+  T++ +I          +A+ ++  M
Sbjct: 368 FNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEM 427

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG-- 204
              G  PNV T+  L+N   K G  +EA  + D+M   GC P+I TYN +L      G  
Sbjct: 428 QAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMM 487

Query: 205 -RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            + E  Y+ L N K     PD  TY  ++DG+C+   + + + LL E   RG + +  T+
Sbjct: 488 SKAEGVYQQLKN-KTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTY 546

Query: 264 NTLFNGYCK-EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           N L     + E  P K + + + M  ++C+P    +++L+   L+ G +  A S+ +EM 
Sbjct: 547 NVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMN 606

Query: 323 RFGFEVDERMMNSL 336
             G  VD   + +L
Sbjct: 607 EKGHLVDASNLEAL 620


>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
 gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
          Length = 447

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 199/426 (46%), Gaps = 59/426 (13%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA----RKV-IDC 145
           L+       E + A++   E  S G+ PN    + +IR  C      +A    R++  DC
Sbjct: 36  LMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDC 95

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
                  PNV T++ILV++LCKSG+  EA  ++ +M + GC PN+ TYN L+ G   + R
Sbjct: 96  A------PNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLER 149

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG-------------------------- 239
           ++E   +L  +   G + DV TYT ++D FCK                            
Sbjct: 150 LDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTA 209

Query: 240 -------RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                  R+ EA+ LL + I+ G  PN V + T+    CK     +   +L  M  + C 
Sbjct: 210 LSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCK 269

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            D +SY  L+      G+   ++ +   M+  G+ +D + MN ++   C K+ +    L 
Sbjct: 270 TDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFC-KAGD----LH 324

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +A+Q+F+ M ++ S+    TY  +I    K ++ D A+  LH  I+    P  IT+N++I
Sbjct: 325 EAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSII 384

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML-ITKLDQL---EKSYDACALYGAALK 468
           ++ C E + ++A  +  +M +    P R SY  L I+K D     +K +D C      L+
Sbjct: 385 KSFCREQREEEARGIFQMMVDSGCFPDRVSYTTLKISKNDAAIYDQKVHDTC------LR 438

Query: 469 QGVIPQ 474
           + V PQ
Sbjct: 439 KHVDPQ 444



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 175/333 (52%), Gaps = 12/333 (3%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           A N  ++ I+++ +C   +F +A +++D M  NG  PNV   T ++  LC +G++ +AL 
Sbjct: 27  AVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALL 86

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
              ++G   C PN+ TY+ L+  LC  G+  EAY ++  +   G  P+V TY A++DGF 
Sbjct: 87  HFRRIGE-DCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFR 145

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K+ R +E + LL E  +RG   +V+T+  + + +CK  +  +   LL  ++KRN     +
Sbjct: 146 KLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNV----V 201

Query: 297 SYSTLLNGL--LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
           +Y++L   L   +  +   A+S+ ++M++ G   ++    ++L  LC  S      L++A
Sbjct: 202 TYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSR-----LDEA 256

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           YQV   M  +   TD  +Y I++       +T ++L  L   +  G+I  T T N VI  
Sbjct: 257 YQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHK 316

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            C  G + +A  L   M +   IPS  +Y+ LI
Sbjct: 317 FCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLI 349



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 142/285 (49%), Gaps = 8/285 (2%)

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           +Y  L++G C  G  ++A E+L  +K++G++P+V  +T ++ G C  G+ ++A+ L    
Sbjct: 32  SYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL-LHFRR 90

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I     PNV T++ L +  CK G P +  GL+  M K+ C P+ ++Y+ L++G  K  ++
Sbjct: 91  IGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERL 150

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
              + + KEM + G   D      +L   C     + + +++AY++   + K+  VT   
Sbjct: 151 DEVLMLLKEMSQRGCRADVITYTMILDIFC-----KNNSIDEAYRLLNALEKRNVVTYNS 205

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            +  +  +  +G +T EAL  L   I+ G  P  + +  V+  LC   ++D+A  +L  M
Sbjct: 206 LFTAL--STAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSM 263

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           Y         SY +L+       ++YD+  L G  L  G I   K
Sbjct: 264 YSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTK 308



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 150/314 (47%), Gaps = 11/314 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+    E   +   + K G + +V  +N L+     L   +  +    E S  G   +  
Sbjct: 111 KSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVI 170

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL--CKSGRLKEALEVLD 179
           T+++++  +C  N   EA ++++ +       NV T+  L  +L   +  R  EAL +L+
Sbjct: 171 TYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTYNSLFTALSTAEGDRTTEALSLLE 226

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M + G +PN   Y  +L  LC   R++EAY++L+++ + G K D  +Y  ++  F   G
Sbjct: 227 KMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAG 286

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R+ +++ELL   +  G   +  T N + + +CK G   +   L K M +R  +P  ++Y+
Sbjct: 287 RTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYN 346

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL+    K  +   AV +  +M++  F+ +    NS+++  C +  E     E+A  +F+
Sbjct: 347 TLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQRE-----EEARGIFQ 401

Query: 360 KMTKKVSVTDPGTY 373
            M       D  +Y
Sbjct: 402 MMVDSGCFPDRVSY 415



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 111/220 (50%), Gaps = 2/220 (0%)

Query: 84  SVSDFNDLLMALVMLNEQET--AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           +V  +N L  AL       T  A+    +    G  PN   +  ++   C  +   EA +
Sbjct: 199 NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQ 258

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V+  M+  G   +  ++ ILV +   +GR  ++LE+L +M   G   + +T N ++   C
Sbjct: 259 VLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFC 318

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G + EA+++  ++   G  P   TY  ++  FCK  + + A++LL++ I+    PNV+
Sbjct: 319 KAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVI 378

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           T+N++   +C+E    +  G+ ++M    C PD++SY+TL
Sbjct: 379 TYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 212/443 (47%), Gaps = 31/443 (6%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +++  L   I  F+ +  +G     + FN LL  +V  +       FF+E  S  +  + 
Sbjct: 105 VQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDV 163

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           ++F I+I+  C   +  ++  ++  + + G+ PNV  +T L++  CK G +++A ++  +
Sbjct: 164 YSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           MG++G   N +TY  L+ GL   G  ++ +EM   ++ DG+ P++YTY  VM+  CK GR
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           + +A ++ +E  ERGV+ N+VT+NTL  G C+E    +   ++  MK     P+ I+Y+T
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-----------MKSWEEK- 348
           L++G    GK+  A+S+ +++   G        N L+ G C           +K  EE+ 
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403

Query: 349 ------------------DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                             D +E A Q+   M +   V D  TY ++I       + +EA 
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                 +E    P  + +N +I   C EG   +AL LL  M E    P+  SY  +I  L
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +  KS +A  L    +  G+ P
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDP 546



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 176/344 (51%), Gaps = 5/344 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++  D+F  + K G   +   +  L+  L     ++   + + +    G+ PN +
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C      +A +V D M + G   N+ T+  L+  LC+  +L EA +V+DQM
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN+ TYN L+ G C VG++ +A  +  ++K+ GL P + TY  ++ GFC+ G +
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A +++ E  ERG+ P+ VT+  L + + +     K + L   M++   +PD  +YS L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G    G++  A  +FK MV    E +E + N+++ G C +    +     A ++ ++M
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR-----ALKLLKEM 504

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            +K    +  +Y  +I  L K +K+ EA   +   I+ G  P T
Sbjct: 505 EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 150/318 (47%), Gaps = 6/318 (1%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           + +++NS  +S  L  ++   ++M   G  P    +N LL  +       + +    N  
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF-NEN 155

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
              +  DVY++  ++ G C+ G   ++ +LL E  E G +PNVV + TL +G CK+G   
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           K   L   M K   + ++ +Y+ L+NGL K G  +    ++++M   G   +    N ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
             LC     +    +DA+QVF++M ++    +  TY  +I  L +  K +EA   +    
Sbjct: 276 NQLC-----KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             G  P  IT+N +I   CG GK+ KAL L   +      PS  +Y++L++   +   + 
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390

Query: 458 DACALYGAALKQGVIPQR 475
            A  +     ++G+ P +
Sbjct: 391 GAAKMVKEMEERGIKPSK 408


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 201/413 (48%), Gaps = 6/413 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+  + +   ++K G    +S  N  +  LVM N  + AV+F        + PN  
Sbjct: 244 RAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVI 303

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+ YC+ +   +A ++I  M   G  P+  ++  ++  LCK  R+KE   ++++M
Sbjct: 304 TYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKM 363

Query: 182 GR-IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            +     P+  TYN  +  L   G  +EA E L   +    + D   Y+A++  FC+ GR
Sbjct: 364 LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 423

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++A E++NE   +G  P+VVT+ ++ NG C+E    +   +L+ M K  C P+ +SY+ 
Sbjct: 424 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 483

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LLNGL K G    A    +EM+    E D  + N++   + M  +  +    +A  +  +
Sbjct: 484 LLNGLCKNGNSLEA----REMMNMS-EEDWWIPNAITYSVLMHGFRREGKSSEACDLVRE 538

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M KK     P    ++I++L + +K DEA   +   +  G     + F  VI   C +  
Sbjct: 539 MIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDD 598

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++ AL LL  MY   K P   +Y  +I  L +  +  +A  L    L+ G+IP
Sbjct: 599 LEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIP 651



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 175/353 (49%), Gaps = 7/353 (1%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           L P+  T++  +          EA + +    +  +  +   ++ +V+S C+ GR+ +A 
Sbjct: 369 LLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAK 428

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           E++++M   GC P++ TY  ++ GLC   +V++A +ML  +   G KP+  +YTA+++G 
Sbjct: 429 EIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGL 488

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK G S EA E++N + E    PN +T++ L +G+ +EG   +   L++ M K+   P  
Sbjct: 489 CKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTP 548

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           +  + L+  L +  K+  A    ++ +  G  V+     +++ G C     +KD LE A 
Sbjct: 549 VEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFC-----QKDDLEAAL 603

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            + + M       D  TY  +I  LGK  + +EA       + +G IP  +T+  VI   
Sbjct: 604 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQY 663

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           C  G+++  L LL  M   ++   RT+Y+ +I KL        A  L G  L+
Sbjct: 664 CRMGRVEDLLKLLEKML--SRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLR 714



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 180/361 (49%), Gaps = 9/361 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N  +  L      + A++F  EA       +   +S ++  +C +    +A+++++ MF
Sbjct: 376 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 435

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V T+T ++N LC+  ++ +A ++L QM + GCKPN  +Y  LL GLC  G   
Sbjct: 436 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 495

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA EM+   + D   P+  TY+ +M GF + G+S+EA +L+ E I++G  P  V  N L 
Sbjct: 496 EAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLI 555

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              C+E    +    ++      C  + ++++T+++G  +   +  A+S+  +M      
Sbjct: 556 QSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKH 615

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D     +++  L      +K  +E+A ++  KM +   +  P TY  VI    +  + +
Sbjct: 616 PDVVTYTTIIDAL-----GKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVE 670

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF-LMYEHAKIPSRTSYDML 446
           + L  L   +      RT  +N VI+ LC  G +++A  LL  ++   +KI + T + ML
Sbjct: 671 DLLKLLEKMLSRQEC-RT-AYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCH-ML 727

Query: 447 I 447
           I
Sbjct: 728 I 728



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/411 (22%), Positives = 191/411 (46%), Gaps = 26/411 (6%)

Query: 50  RSLQAQRF-VDRIKASPL------KERID----IFDSIKKDGTNWSVSDFNDLLMALVML 98
           R  + +RF VD++  S +      + R+D    I + +   G    V  +  ++  L   
Sbjct: 397 REAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQE 456

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
            + + A K   +   +G  PN+ +++ ++   C   +  EAR++++   ++ + PN  T+
Sbjct: 457 RKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITY 516

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
           ++L++   + G+  EA +++ +M + G  P     N L++ LC   +V+EA   +    N
Sbjct: 517 SVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLN 576

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +G   +V  +T V+ GFC+      A+ LL++       P+VVT+ T+ +   K+G   +
Sbjct: 577 NGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEE 636

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              L   M +   +P  ++Y T+++   + G++   + + ++M+    +      N ++ 
Sbjct: 637 ATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKML--SRQECRTAYNQVIE 694

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT-LGKGKKTDEALIHLHHAI 397
            LC  S+     LE AY++  K+ +  S  D  T  ++I + L KG      L+  + A 
Sbjct: 695 KLC--SFGN---LEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGI----PLMSYNVAC 745

Query: 398 EMGH---IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            M +   IP       V + L  EGK ++A  L+    E  +I  +   D+
Sbjct: 746 RMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQCQLDL 796


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 200/425 (47%), Gaps = 17/425 (4%)

Query: 52  LQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA 111
           LQ  RF D ++   LKE       +++ G       +N L++ L    + + A  F  E 
Sbjct: 466 LQKSRFGDAVRV--LKE-------MREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEM 516

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
              G  P+++T+   I  Y    +F  A K +  M + G  PN    T L+N  CK G++
Sbjct: 517 VENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKV 576

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
            EA      M   G   + +TY  L+ GL   G+V +A E+   ++  G+ PDV++Y  +
Sbjct: 577 IEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTL 636

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           +DGF K+G   +A  + +E ++ G+T NV+ +N L  G+C+ G   K   LL  M  +  
Sbjct: 637 IDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGF 696

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P+ ++Y T+++G  K G +  A  +F EM   G   D  +  +L+ G C       + +
Sbjct: 697 PPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCC-----RLNDV 751

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIV--IRTLGKGKKTDEALIHL-HHAIEMGHIPRTITF 408
           E A  +FE   K  + +      ++  +   GK + T + +  L   + +    P  +T+
Sbjct: 752 ERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTY 811

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           N +I  LC EG ++ A  L   M +   +P+  +Y  L+   D++ +  +  +++   + 
Sbjct: 812 NIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIA 871

Query: 469 QGVIP 473
            G+ P
Sbjct: 872 AGIEP 876



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 177/398 (44%), Gaps = 8/398 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++   +FD +   G       +  L+             +   E     +  + +
Sbjct: 362 KEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPY 421

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+   ++  C+  D   A  ++  M  +G  PNV  +T L+ +  +  R  +A+ VL +M
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEM 481

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+   YN L+ GL    +++EA   L+ +  +G KPD +TY A + G+ + G  
Sbjct: 482 REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEF 541

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A + + E +E GV PN V    L N YCK+G  ++     + M ++  L D  +Y+ L
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL+K GK+  A  IF EM   G   D     +L+ G     + +   ++ A  +F++M
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDG-----FSKLGNMQKASSIFDEM 656

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +    ++   Y +++    +  + ++A   L      G  P  +T+  +I   C  G +
Sbjct: 657 VQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDL 716

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKS 456
            +A  L   M     +P    Y  L+    +L+ +E++
Sbjct: 717 AEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 754



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 182/429 (42%), Gaps = 49/429 (11%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           FA+A     E L+    P  +     ++   K   + E    F S+ + G       +  
Sbjct: 541 FASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTV 600

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  LV   +   A + F E    G+AP+ +++  +I  +    +  +A  + D M   G
Sbjct: 601 LMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAG 660

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              NV  + +L+   C+SG +++A E+LD+M   G  PN  TY  ++ G C  G + EA+
Sbjct: 661 LTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAF 720

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM------------------ELLNEAI 252
           ++   +K  GL PD + YT ++DG C++     A+                   L+N   
Sbjct: 721 QLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVF 780

Query: 253 ERGVT--------------------PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           + G T                    PN VT+N + +  CKEG       L   M+K N +
Sbjct: 781 KFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLM 840

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P  I+Y++LLNG  K G+     S+F E++  G E D  M + ++     +    K L+ 
Sbjct: 841 PTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALV- 899

Query: 353 DAYQVFEKMTKKVSVTDPGTYGI-----VIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
               + ++M  K +V D     I     ++    K  + + A   + + + + +IP + T
Sbjct: 900 ----LLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSST 955

Query: 408 FNNVIQALC 416
              +I   C
Sbjct: 956 VIELINESC 964



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 148/327 (45%), Gaps = 45/327 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++   IFD + + G   +V  +N LL       E E A +   E S  G  PN+ 
Sbjct: 642 KLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAV 701

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I  YC   D  EA ++ D M   G  P+   +T LV+  C+   ++ A+ + +  
Sbjct: 702 TYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETN 761

Query: 182 GRIGC---------------------------------------KPNIQTYNCLLKGLCY 202
            + GC                                       KPN  TYN ++  LC 
Sbjct: 762 EK-GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCK 820

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            G +E A E+  +++   L P V TYT++++G+ K+GR +E   + +E I  G+ P+ + 
Sbjct: 821 EGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIM 880

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD--KISYST---LLNGLLKWGKIRPAVSI 317
           ++ + N + KEG   K + LL  M  +N + D  K+S ST   LL+G  K G++  A  +
Sbjct: 881 YSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 940

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKS 344
            + MVR  +  D   +  L+   C+ S
Sbjct: 941 VENMVRLKYIPDSSTVIELINESCISS 967



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 157/345 (45%), Gaps = 8/345 (2%)

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N ++  E +K + C    G  P+  ++ +L++ LCK  RL++A  +L +M  +G   +  
Sbjct: 260 NVDEALELKKSMSC---KGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNV 316

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            Y+ L+ GL      + A  ++  + + G   D   Y   +    K G   +A  L +  
Sbjct: 317 AYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGM 376

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I  GVTP    + +L  G+ +E    KG  LL  +KKRN +    +Y T + G+   G +
Sbjct: 377 ITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDL 436

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A +I KEM   G   +  +  +L+     K++ +K    DA +V ++M ++    D  
Sbjct: 437 DGAYNIVKEMGASGCRPNVVIYTTLI-----KTFLQKSRFGDAVRVLKEMREQGIAPDTF 491

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            Y  +I  L K KK DEA   L   +E G  P   T+   I      G+   A   +  M
Sbjct: 492 CYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM 551

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            E   IP++     LI +  +  K  +AC+ + + ++QG++   K
Sbjct: 552 LECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAK 596



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/406 (23%), Positives = 169/406 (41%), Gaps = 5/406 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E +++  S+   G   S   +N L+  L      E A     E +S GL  ++  +SI
Sbjct: 261 VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSI 320

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I       +   A  ++  M  +G+  +   +   +  + K G +++A  + D M   G
Sbjct: 321 LIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFG 380

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P  + Y  L++G      V + YE+L+ +K   +    YTY   + G C  G  + A 
Sbjct: 381 VTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAY 440

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            ++ E    G  PNVV + TL   + ++      V +LK M+++   PD   Y++L+ GL
Sbjct: 441 NIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGL 500

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  K+  A S   EMV  GF+ D     + + G     + E      A +  ++M +  
Sbjct: 501 SKAKKMDEARSFLLEMVENGFKPDAFTYGAFISG-----YIEAGEFASADKYVKEMLECG 555

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            + +      +I    K  K  EA       +E G +    T+  ++  L   GK++ A 
Sbjct: 556 VIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAE 615

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
            +   M      P   SY  LI    +L     A +++   ++ G+
Sbjct: 616 EIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 159/372 (42%), Gaps = 5/372 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A++     S  GL P+  +++++I   C +    +A+ ++  M   G   +   ++IL
Sbjct: 262 DEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSIL 321

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ L K      A  ++ +M   G   +   Y+  +  +   G +E+A  +   +   G+
Sbjct: 322 IDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGV 381

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P    Y ++++GF +     +  ELL E  +R +  +  T+ T   G C  G       
Sbjct: 382 TPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYN 441

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           ++K M    C P+ + Y+TL+   L+  +   AV + KEM   G   D    NSL+ GL 
Sbjct: 442 IVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGL- 500

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                +   +++A     +M +     D  TYG  I    +  +   A  ++   +E G 
Sbjct: 501 ----SKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGV 556

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           IP  +    +I   C +GK+ +A      M E   +    +Y +L+  L +  K  DA  
Sbjct: 557 IPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEE 616

Query: 462 LYGAALKQGVIP 473
           ++     +G+ P
Sbjct: 617 IFHEMRGKGIAP 628



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 148/374 (39%), Gaps = 28/374 (7%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCM--FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           F I+I  Y  K    EA  V       D    P++     L+++L K  RL    +V   
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKG 214

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND--------------------- 219
           M       ++Q+Y  L+   C  G V+ A ++L+  + +                     
Sbjct: 215 MVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCK 274

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           GL P   +Y  ++DG CK  R  +A  LL E    G+  + V ++ L +G  K       
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
            GL+  M       D + Y   +  + K G +  A ++F  M+ FG     R   SL+ G
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
                + EK+ +   Y++  ++ K+  V  P TYG  ++ +      D A   +      
Sbjct: 395 F----FREKN-VRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGAS 449

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P  + +  +I+    + +   A+ +L  M E    P    Y+ LI  L + +K  +A
Sbjct: 450 GCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEA 509

Query: 460 CALYGAALKQGVIP 473
            +     ++ G  P
Sbjct: 510 RSFLLEMVENGFKP 523


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 197/393 (50%), Gaps = 15/393 (3%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +F+ + +        +FN +L +LV      T +    +    G+ PN    +I+I
Sbjct: 45  DAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 104

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS----------GRLKEALEV 177
             +C       A  V+  +   GY PN  T   L+  LC +          G+LK+A+++
Sbjct: 105 NSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDL 164

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
            ++M      P++ T+  L+ G C  GRV+EA  +L  +   G+KP V TY ++MDG+  
Sbjct: 165 FNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFL 224

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           V + N+A  + N   + GV+P++ +++ L NG+CK     + + LLK M  +  +P+ ++
Sbjct: 225 VKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVT 284

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           YS+L++GL K GKI  A+ +  EM   G   +    +S+L  LC     +   +++A  +
Sbjct: 285 YSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALC-----KNHQVDNAIAL 339

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
             +M  +    +  TY I+I+ L +  K ++A       +  GH     T+  +IQ  C 
Sbjct: 340 LTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCD 399

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +G  D+AL LL  M ++  IP+  +Y+++I  L
Sbjct: 400 KGLFDEALTLLSKMEDNGCIPNAKTYEIIILSL 432



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 168/312 (53%), Gaps = 5/312 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           AV  F++     + P+ +TF+I++  +C +    EA+ V+  M   G  P V T+  L++
Sbjct: 161 AVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMD 220

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
                 ++ +A  + + M ++G  P+IQ+Y+ L+ G C +  ++EA E+L  + +  + P
Sbjct: 221 GYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIP 280

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V TY++++DG CK G+ + A++L++E  +RG  PN+VT++++ +  CK       + LL
Sbjct: 281 NVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALL 340

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             MK +   P+  +Y+ L+ GL + GK+  A  +F++++  G  ++      +++G C  
Sbjct: 341 TQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFC-- 398

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +K L ++A  +  KM     + +  TY I+I +L K  + + A   L   IE     
Sbjct: 399 ---DKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDG 455

Query: 404 RTITFNNVIQAL 415
           R    N++I ++
Sbjct: 456 RVALTNDLIASI 467



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 151/294 (51%), Gaps = 1/294 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        VD   K   +KE  ++   +   G    V  +N L+    ++ +   A  
Sbjct: 174 NPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKS 233

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F+  +  G++P+  ++SI+I  +C      EA +++  M      PNV T++ L++ LC
Sbjct: 234 IFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLC 293

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSG++  AL+++D+M   G  PNI TY+ +L  LC   +V+ A  +L  +KN G++P++Y
Sbjct: 294 KSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMY 353

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYT ++ G C+ G+  +A ++  + + +G   NV T+  +  G+C +G   + + LL  M
Sbjct: 354 TYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKM 413

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           +   C+P+  +Y  ++  L K  +   A  +  EM+   F+    + N L+  +
Sbjct: 414 EDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASI 467



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 165/349 (47%), Gaps = 15/349 (4%)

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N ND  +A  + + +      P    F  ++ SL KS      L +  +M   G KPN+ 
Sbjct: 39  NNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLV 98

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK----------VGRS 241
             N L+   C +G +  A+ +L  +   G KP+  T   ++ G C           VG+ 
Sbjct: 99  NCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL 158

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A++L N+ I   + P+V TF  L +G+CKEG   +   +L +M  +   P  ++Y++L
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G     ++  A SIF  M + G   D +  + L+ G C     +  ++++A ++ ++M
Sbjct: 219 MDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFC-----KIKMMDEAMELLKEM 273

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K  + +  TY  +I  L K  K   AL  +    + G  P  +T+++++ ALC   ++
Sbjct: 274 HHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQV 333

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           D A+ LL  M      P+  +Y +LI  L Q  K  DA  ++   L +G
Sbjct: 334 DNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKG 382



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 1/142 (0%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E  D  + P  +     +D + K   +   I +   +K  G   ++  +  L+  L    
Sbjct: 307 EMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSG 366

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           + E A K F +    G   N +T+++MI+ +C+K  F EA  ++  M DNG  PN  T+ 
Sbjct: 367 KLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYE 426

Query: 160 ILVNSLCKSGRLKEALEVLDQM 181
           I++ SL K    + A ++L +M
Sbjct: 427 IIILSLFKKDENEMAEKLLCEM 448


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 187/370 (50%), Gaps = 6/370 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+  F   ++ G+ P   T + ++      N+  ++  V + M   G  P+V  F+  +N
Sbjct: 196 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAIN 254

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           + CK G++++A+++   M ++G  PN+ TYN L+ GLC  G ++EA+     +  DG+  
Sbjct: 255 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 314

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            + TY+ +++G  K+ + NEA  +L E +E+G TPN V +NTL +GYCK G     + + 
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 374

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M  +   P+ ++ ++++ G  K G++  A  I +EM+  GF ++     +++  LCM 
Sbjct: 375 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMN 434

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           S       E A +   +M  +    + G    ++  L K  K  +A+      +E G   
Sbjct: 435 SR-----FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA 489

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             +T N +I  LC  G + +A+ LL  M E   +  + +Y+ LI+   +  K  +   L 
Sbjct: 490 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLR 549

Query: 464 GAALKQGVIP 473
           G  +KQG+ P
Sbjct: 550 GEMVKQGIEP 559



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 192/412 (46%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E     + + KDG N ++  ++ L+  L+ L +   A     E    G  PN  
Sbjct: 293 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 352

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  YC   +  +A ++   M   G +PN  T   ++   CK G++++A  +L++M
Sbjct: 353 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 412

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   N   +  ++  LC   R E A   L  +    ++P+    T ++ G CK G+ 
Sbjct: 413 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 472

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A+EL    +E+G   N+VT N L +G CK G   + V LLK M +R  + DKI+Y+TL
Sbjct: 473 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 532

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K GK+     +  EMV+ G E D    N L+ G+C         L++A  ++ + 
Sbjct: 533 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMC-----RIGKLDEAVNLWNEC 587

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +  V +  TYG++I    K  K +E        +       ++ +N +I+A C  G  
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 647

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +A  L   M      P+  +Y  LI  +  + +  DA  L     K+G++P
Sbjct: 648 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 699



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 204/411 (49%), Gaps = 6/411 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA+ L++   +F+++++ G +  V  F+  + A     + E A++ F +    G++PN 
Sbjct: 223 VKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNV 281

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I   C   +  EA +  + M  +G +  + T+++L+N L K  +  EA  VL +
Sbjct: 282 VTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKE 341

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
               G  PN   YN L+ G C +G + +A  +  ++ + G+ P+  T  +++ GFCK+G+
Sbjct: 342 TLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQ 401

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  +L E + RG + N   F T+ +  C        +  L+ M  RN  P+    +T
Sbjct: 402 MEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTT 461

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+ GL K GK   AV ++  ++  GF  +    N+L+ GLC     +   +++A ++ +K
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLC-----KTGNMQEAVRLLKK 516

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++  V D  TY  +I    K  K +E        ++ G  P T T+N +I  +C  GK
Sbjct: 517 MLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGK 576

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           +D+A+ L         +P+  +Y ++I    + +K  +   L+   L Q +
Sbjct: 577 LDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 627



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 201/450 (44%), Gaps = 12/450 (2%)

Query: 28  KLVVFAAASLSTAESLDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVS 86
           KL  F  A+    E+L+    P  +     +D   K   L + + I   +   G N +  
Sbjct: 328 KLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 387

Query: 87  DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
             N ++     + + E A     E  S G + N   F+ +I   C  + F  A + +  M
Sbjct: 388 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 447

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
                 PN    T LV  LCK G+  +A+E+  ++   G   N+ T N L+ GLC  G +
Sbjct: 448 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 507

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA  +L  +   G   D  TY  ++ G CK G+  E  +L  E +++G+ P+  T+N L
Sbjct: 508 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 567

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G C+ G   + V L    K R+ +P+  +Y  +++G  K  KI     +F E++    
Sbjct: 568 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 627

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           E++  + N+L+R  C           +A+++ + M  K       TY  +I  +    + 
Sbjct: 628 ELNSVVYNTLIRAYCRNGNTV-----EAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 682

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           ++A   +    + G +P  + +  +I   C  G++DK + +L  M  +   P++ +Y ++
Sbjct: 683 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 742

Query: 447 ITKLDQLEKSYD---ACALYGAALKQGVIP 473
           I   D   KS D   A  L    + +G++P
Sbjct: 743 I---DGYSKSGDMKTAAKLLHEMVGKGIVP 769



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 170/362 (46%), Gaps = 5/362 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  L    +   AV+ +      G   N  T + +I   C   +  EA +++  M + G
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           +  +  T+  L++  CK G+++E  ++  +M + G +P+  TYN L+ G+C +G+++EA 
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +    K+  L P+VYTY  ++DG+CK  +  E  +L  E + + +  N V +NTL   Y
Sbjct: 582 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 641

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+ G  ++   L   M+ +   P   +YS+L++G+   G++  A  +  EM + G   + 
Sbjct: 642 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 701

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +L+ G C     +K        V ++M+      +  TY ++I    K      A 
Sbjct: 702 VCYTALIGGYCKLGQMDK-----VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAA 756

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             LH  +  G +P T+T+N +    C EGKI++   +   M +        +Y  L+   
Sbjct: 757 KLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816

Query: 451 DQ 452
            Q
Sbjct: 817 QQ 818



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 144/292 (49%), Gaps = 5/292 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E   +   + K G       +N L+  +  + + + AV  ++E  S  L PN +
Sbjct: 538 KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY 597

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ +MI  YC  +   E  K+   +       N   +  L+ + C++G   EA ++ D M
Sbjct: 598 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 657

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P   TY+ L+ G+C +GR+E+A  ++  ++ +GL P+V  YTA++ G+CK+G+ 
Sbjct: 658 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQM 717

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++ + +L E     + PN +T+  + +GY K G       LL  M  +  +PD ++Y+ L
Sbjct: 718 DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVL 777

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
            NG  K GKI     I   M + G  +DE    +L+ G     W++   L +
Sbjct: 778 TNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG-----WQQPSALTN 824



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/346 (22%), Positives = 159/346 (45%), Gaps = 40/346 (11%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + ++++  + + G   ++   N L+  L      + AV+   +    G   +  T++ +I
Sbjct: 474 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 533

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    E  K+   M   G  P+  T+ +L++ +C+ G+L EA+ + ++       
Sbjct: 534 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 593

Query: 188 PNIQTYNCLLKGLCYVGRVE-----------------------------------EAYEM 212
           PN+ TY  ++ G C   ++E                                   EA+++
Sbjct: 594 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 653

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
             ++++ G+ P   TY++++ G C +GR  +A  L++E  + G+ PNVV +  L  GYCK
Sbjct: 654 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 713

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   K V +L+ M   +  P+KI+Y+ +++G  K G ++ A  +  EMV  G   D   
Sbjct: 714 LGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVT 773

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
            N L  G C     ++  +E+ +++ + M+++    D  TY  ++ 
Sbjct: 774 YNVLTNGFC-----KEGKIEEGFKICDYMSQEGLPLDEITYTTLVH 814


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 193/393 (49%), Gaps = 8/393 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I + + +++ G + ++  +N L+      ++   A+    +    G  P+  T S ++  
Sbjct: 30  ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 89

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC+     +A  ++D M + GY P+  TFT L++ L    +  EA+ ++D+M + GC+PN
Sbjct: 90  YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 149

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY  ++ GLC  G ++ A+ +L  ++   ++ DV  +  ++D  CK    ++A+ L  
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 209

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E   +G+ PNVVT+++L +  C  G       LL  M ++   P+ ++++ L++  +K G
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K   A  +  +M++   + D    NSL+ G CM      D L+ A Q+FE M  K    D
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM-----HDRLDKAKQMFEFMVSKDCFPD 324

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  +I+   K K+ ++           G +  T+T+  +IQ L  +G  D A  +  
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384

Query: 430 LMYEHAKIPSRTSYDMLITKL---DQLEKSYDA 459
            M      P   +Y +L+  L    +LEK+ + 
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 185/370 (50%), Gaps = 5/370 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           AV    +    G  P++ TF+ +I      N   EA  ++D M   G  PN+ T+ ++VN
Sbjct: 99  AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 158

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK G +  A  +L++M     + ++  +N ++  LC    V++A  +   ++  G++P
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V TY++++   C  GR ++A +LL++ IE+ + PN+VTFN L + + KEG  ++   L 
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M KR+  PD  +Y++L+NG     ++  A  +F+ MV      D    N+L++G C  
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC-- 336

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   +ED  ++F +M+ +  V D  TY  +I+ L      D A       +  G  P
Sbjct: 337 ---KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             +T++ ++  LC  GK++KAL +   M +         Y  +I  + +  K  D   L+
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453

Query: 464 GAALKQGVIP 473
            +   +GV P
Sbjct: 454 CSLSLKGVKP 463



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 197/409 (48%), Gaps = 7/409 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + + D + + G       F  L+  L + N+   AV         G  PN  T+ +
Sbjct: 96  ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C + D   A  +++ M       +V  F  +++SLCK   + +AL +  +M   G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+ TY+ L+  LC  GR  +A ++L ++    + P++ T+ A++D F K G+  EA 
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L ++ I+R + P++ T+N+L NG+C      K   + + M  ++C PD  +Y+TL+ G 
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++     +F+EM   G   D     +L++GL    + + D  ++A +VF++M    
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL----FHDGD-CDNAQKVFKQMVSDG 390

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKA 424
              D  TY I++  L    K ++AL  +   ++   I   I  +  +I+ +C  GK+D  
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKAL-EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L   +      P+  +Y+ +I+ L       +A AL     + G +P
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 498



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 169/337 (50%), Gaps = 7/337 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN ++ +L      + A+  F E  + G+ PN  T+S +I C C+   + +A +++  M 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +   +PN+ TF  L+++  K G+  EA ++ D M +    P+I TYN L+ G C   R++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A +M   + +    PD+ TY  ++ GFCK  R  +  EL  E   RG+  + VT+ TL 
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G   +G       + K M      PD ++YS LL+GL   GK+  A+ +F  M +   +
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           +D  +  +++ G+C     +   ++D + +F  ++ K    +  TY  +I  L   +   
Sbjct: 428 LDIYIYTTMIEGMC-----KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 482

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           EA   L    E G +P + T+N +I+A   +G  DKA
Sbjct: 483 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG--DKA 517



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 143/291 (49%), Gaps = 1/291 (0%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           ++ AS   ++ ++ K NP  +     +D  +K     E   + D + K   +  +  +N 
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    M +  + A + F    S    P+  T++ +I+ +C      +  ++   M   G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +  T+T L+  L   G    A +V  QM   G  P+I TY+ LL GLC  G++E+A 
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E+   ++   +K D+Y YT +++G CK G+ ++  +L      +GV PNVVT+NT+ +G 
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           C +    +   LLK MK+   LPD  +Y+TL+   L+ G    +  + +EM
Sbjct: 476 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 153/307 (49%), Gaps = 8/307 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  F  L++++ K  +    + + ++M R+G   N+ TYN L+   C   ++  A  +
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +P + T +++++G+C   R ++A+ L+++ +E G  P+ +TF TL +G   
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                + V L+  M +R C P+ ++Y  ++NGL K G I  A ++  +M     E D  +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N+++  LC         ++DA  +F++M  K    +  TY  +I  L    +  +A   
Sbjct: 188 FNTIIDSLCKYRH-----VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL-- 450
           L   IE    P  +TFN +I A   EGK  +A  L   M + +  P   +Y+ LI     
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302

Query: 451 -DQLEKS 456
            D+L+K+
Sbjct: 303 HDRLDKA 309



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 40/358 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + +++F  ++  G   +V  ++ L+  L        A +  S+     + PN  
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +  +  F EA K+ D M      P++ T+  L+N  C   RL +A ++ + M
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN----------------------- 218
               C P++ TYN L+KG C   RVE+  E+   + +                       
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376

Query: 219 ------------DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                       DG+ PD+ TY+ ++DG C  G+  +A+E+ +   +  +  ++  + T+
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             G CK G    G  L   +  +   P+ ++Y+T+++GL     ++ A ++ K+M   G 
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             D    N+L+R        + D    A ++  +M     V D  T G+V   L  G+
Sbjct: 497 LPDSGTYNTLIRA----HLRDGDKAASA-ELIREMRSCRFVGDASTIGLVANMLHDGR 549



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 5/165 (3%)

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M K   LP    ++ LL+ + K  K    +S+ ++M R G   +    N L+   C +S 
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                +  A  +  KM K        T   ++     GK+  +A+  +   +EMG+ P T
Sbjct: 61  -----ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 115

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ITF  +I  L    K  +A+ L+  M +    P+  +Y +++  L
Sbjct: 116 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 191/400 (47%), Gaps = 20/400 (5%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N +   LV       A+  ++   S G  PNS T+ +++   C +    +A K+ D M 
Sbjct: 182 YNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEML 241

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  P+V  +T+L++SLC  GR+++A  +L  M   GC P+  TY   L GLC  GRV+
Sbjct: 242 ERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVD 301

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA+     +++ G    +  Y+ ++DG  + GR +E +    E + + ++P++  +  L 
Sbjct: 302 EAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILI 361

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             + + G       LL  MK +  +PD   Y+TLL  L   G I  A S+  EM++    
Sbjct: 362 RRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVV 421

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           +D    N ++ GLC     +K L++ A QVF++M +        TY  +I  L +    +
Sbjct: 422 LDSTTHNIMICGLC-----KKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLE 476

Query: 388 EALIHLHHAIEMGHIPR--------------TITFNNVIQALCGEGKIDKALLLLFLMYE 433
           EA + L H +EMG+ P               T +   ++  +C  G++ KA  LL  + E
Sbjct: 477 EARM-LFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIE 535

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              +P   +Y+ LI  L + +    A  L+     +G+ P
Sbjct: 536 SGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISP 575



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 186/404 (46%), Gaps = 46/404 (11%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A     E    G  P+++ ++ +++   +  +   A+ ++  M  N    + TT  I++ 
Sbjct: 373 AFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMIC 432

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK G + +A++V D+MG  GC P + TYN L+ GL   G +EEA  ML +    G  P
Sbjct: 433 GLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEA-RMLFHKMEMGNNP 491

Query: 224 DVY--------------TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            ++              +   ++DG C+ G+  +A +LL   IE GV P+VVT+NTL NG
Sbjct: 492 SLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLING 551

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            CK       + L K ++ +   PD+I+Y TL++GL +  +   A  +F+ ++R G    
Sbjct: 552 LCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPS 611

Query: 330 ERMMNSLLRGLC-MKS-------W-----------EEKDLLEDAYQVFE----------- 359
             + N+++R LC MK        W            E +++ +A + FE           
Sbjct: 612 LPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKEL 671

Query: 360 -KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            K+ +     +P  Y I +  L + +K D+AL   H   E G +        +I  LC +
Sbjct: 672 IKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWD 731

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
             ++ A+ ++        I S+   + L+  L    + +DA AL
Sbjct: 732 RNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSLCIRYRRHDAQAL 775



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 158/358 (44%), Gaps = 8/358 (2%)

Query: 96  VMLNEQETAVKFF---SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
           V+L  +  AV  F   ++A + GL   S  F  ++  + +     EA +    M D    
Sbjct: 117 VLLASEPDAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCR 176

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P    +  +   L   G +  AL + ++M   GC PN  TY  L+ GLC  G   +A +M
Sbjct: 177 PTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKM 236

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G+ PDV  YT ++   C  GR  +A  LL    E G  P+ VT+    +G CK
Sbjct: 237 FDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCK 296

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   +     +L++        I YS L++GL + G+    +S + EM+      D  +
Sbjct: 297 AGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITL 356

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
              L+R      + E    +DA+ + ++M  K  V D   Y  +++ L      D A   
Sbjct: 357 YTILIR-----RFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSL 411

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +   ++   +  + T N +I  LC +G IDKA+ +   M EH   P+  +Y+ LI  L
Sbjct: 412 MSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGL 469



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 172/408 (42%), Gaps = 53/408 (12%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+K F E    G+ P+   +++++   CN+    +A +++  M +NG  P+  T+T+ ++
Sbjct: 233 ALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLS 292

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK+GR+ EA    + +   G    +  Y+CL+ GL   GR +E       +    + P
Sbjct: 293 GLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISP 352

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN--------------- 268
           D+  YT ++  F + GR+ +A  LL+E  ++G  P+   +NTL                 
Sbjct: 353 DITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLM 412

Query: 269 --------------------GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
                               G CK+G   K + +   M +  C P  ++Y+ L++GL + 
Sbjct: 413 SEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRA 472

Query: 309 GKIRPAVSIFKEM---------VRFGFEV----DERMMNSLLRGLCMKSWEEKDLLEDAY 355
           G +  A  +F +M         +R         D   +  L+ G+C      K     AY
Sbjct: 473 GMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLK-----AY 527

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++   + +   V D  TY  +I  L K K  D AL         G  P  IT+  +I  L
Sbjct: 528 KLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGL 587

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
               + + A +L   +      PS   Y+ ++  L +++K   A  L+
Sbjct: 588 WRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLW 635



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 42/206 (20%), Positives = 91/206 (44%), Gaps = 11/206 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +   I + G    V  +N L+  L      + A++ F E    G++P+  T+  +I    
Sbjct: 529 LLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLW 588

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV-LDQMGRIGCKPNI 190
             +   +A  +   +  +G  P++  +  ++ SLC+  +L +A+ + LD + +   K N+
Sbjct: 589 RAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPK---KYNL 645

Query: 191 QTYNCLLKGL--CYV-GRVEEAYEMLMNVKN--DGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              + ++     C+  G ++E  + L+ +      L P+ YT   +  G C+V + ++A+
Sbjct: 646 SPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVI--GLCQVRKIDDAL 703

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYC 271
            + +   E G+         L N  C
Sbjct: 704 RIFHILEEFGIVVTPACCALLINYLC 729


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 197/421 (46%), Gaps = 23/421 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    KE  +++  +  +        +  L+  L    + ++A + +S+    GL  +  
Sbjct: 276 KLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVS 335

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I+ +C      EA K  D    +G    +TT+ I+   L  SG + EA E+L Q+
Sbjct: 336 VYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQL 394

Query: 182 -GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
                C P+  T+  L+ GLC  G    A+E+L + +N G + DV++Y+++++ FCK GR
Sbjct: 395 ENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGR 454

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           +++A E+    ++ G  PN   +N L NG+C+       + +   M    C P  I+Y+T
Sbjct: 455 THDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNT 514

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------MKSWEEKDLLE 352
           L++GL K  K + A S+ KEM+  GF+ D R   SL+RGLC        ++ W+E  +L+
Sbjct: 515 LIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDE--ILD 572

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
              QV           D   + I+I  L    K DEA        E    P  +T+N ++
Sbjct: 573 AGLQV-----------DVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLM 621

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
                 G IDKA  L   + ++   P   +Y+  I  L    ++ +   L    L  G++
Sbjct: 622 DGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIM 681

Query: 473 P 473
           P
Sbjct: 682 P 682



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 198/448 (44%), Gaps = 41/448 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNS 120
           K   L   +D+ D +   G       +N LL         E A+K + +     G +PN 
Sbjct: 205 KHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNL 264

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+ +M+   C    F EA +V   M  N +  +  T+ IL++ LC+SG +  A  V   
Sbjct: 265 ATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSD 324

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGR----------------------------------V 206
           M + G   ++  YN L+KG C VGR                                  V
Sbjct: 325 MVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMV 384

Query: 207 EEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            EA E+L  ++ND    PD  T+  ++ G C+ G +N A E+L +A   G   +V ++++
Sbjct: 385 SEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSS 444

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + N +CK+G       + K M K  C P+   Y+ L+NG  +  KI  A+ I+ EM   G
Sbjct: 445 MINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNG 504

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   N+L+ GLC     + +  ++A  + ++M ++    D  TY  +IR L + KK
Sbjct: 505 CCPTIITYNTLIDGLC-----KAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKK 559

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D AL      ++ G     +  N +I  LC  GK+D+A  +   M E    P+  +Y+ 
Sbjct: 560 VDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNT 619

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           L+    ++     A +L+ A L  G+ P
Sbjct: 620 LMDGFYEIGSIDKAASLWTAILDNGLKP 647



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 189/377 (50%), Gaps = 7/377 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  + K G    VS +N L+     +     A KF+      G+   + T++IM +   
Sbjct: 321 VYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT-TYNIMTKGLL 379

Query: 132 NKNDFFEARKVIDCM-FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           +     EA +++  +  D    P+  TF  L++ LC++G    A E+L+     G + ++
Sbjct: 380 DSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDV 439

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y+ ++   C  GR  +A E+  N+  DG KP+ + Y A+++GFC+V + N+A+++  E
Sbjct: 440 FSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIE 499

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G  P ++T+NTL +G CK     +   L K M +R   PD  +Y++L+ GL +  K
Sbjct: 500 MTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKK 559

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A+ I+ E++  G +VD  + N L+ GLC         +++A+ ++ +M +K    + 
Sbjct: 560 VDVALRIWDEILDAGLQVDVMVHNILIHGLC-----SAGKVDEAFCIYLEMKEKNCSPNL 614

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  ++    +    D+A       ++ G  P  +T+N  I+ LC   +  + +LLL  
Sbjct: 615 VTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNE 674

Query: 431 MYEHAKIPSRTSYDMLI 447
           +     +P+  ++ +L+
Sbjct: 675 VLATGIMPTVITWSILV 691



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 131/242 (54%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +++ ++ KDG   +   +N L+     +++   A+K + E +S G  P   T++ +I   
Sbjct: 460 EVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGL 519

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C    + EA  +   M + G+ P++ T+  L+  LC+  ++  AL + D++   G + ++
Sbjct: 520 CKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDV 579

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             +N L+ GLC  G+V+EA+ + + +K     P++ TY  +MDGF ++G  ++A  L   
Sbjct: 580 MVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTA 639

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            ++ G+ P++VT+NT   G C      +GV LL  +     +P  I++S L+  ++K+G 
Sbjct: 640 ILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGP 699

Query: 311 IR 312
           I+
Sbjct: 700 IQ 701



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 190/436 (43%), Gaps = 49/436 (11%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS--SYG--LAPNSWTFSIMIRCYCNKND 135
           G N  V   N LL A V       A  FF+  S  ++G  +APN  T++I++R  C + D
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
              A  +   +   G  P+  T++ L++ L K  +L  AL++LD+M   G + +   YN 
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233

Query: 196 LLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
           LL G    G  E+A ++    V++ G  P++ TY  ++DG CK+GR  EA E+ +  +  
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL------------ 302
               + VT+  L +G C+ G       +   M K   + D   Y++L+            
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353

Query: 303 ----------------------NGLLKWGKIRPAVSIFKEMVR-FGFEVDERMMNSLLRG 339
                                  GLL  G +  A  + K++        D+    +L+ G
Sbjct: 354 WKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHG 413

Query: 340 LCMKSWEEK--DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
           LC   +  +  ++LEDA    E++       D  +Y  +I    K  +T +A     + +
Sbjct: 414 LCENGYANRAFEILEDARNSGEEL-------DVFSYSSMINRFCKDGRTHDANEVYKNMV 466

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
           + G  P +  +N +I   C   KI+ A+ +   M  +   P+  +Y+ LI  L + EK  
Sbjct: 467 KDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQ 526

Query: 458 DACALYGAALKQGVIP 473
           +A +L    L++G  P
Sbjct: 527 EASSLTKEMLERGFKP 542



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 106/213 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           + S + + I I+  +  +G   ++  +N L+  L    + + A     E    G  P+  
Sbjct: 486 RVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIR 545

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +IR  C       A ++ D + D G   +V    IL++ LC +G++ EA  +  +M
Sbjct: 546 TYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEM 605

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C PN+ TYN L+ G   +G +++A  +   + ++GLKPD+ TY   + G C   R+
Sbjct: 606 KEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRT 665

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            E + LLNE +  G+ P V+T++ L     K G
Sbjct: 666 PEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698


>gi|297724097|ref|NP_001174412.1| Os05g0393900 [Oryza sativa Japonica Group]
 gi|255676341|dbj|BAH93140.1| Os05g0393900 [Oryza sativa Japonica Group]
          Length = 553

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 189/388 (48%), Gaps = 9/388 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY-CNKNDFFEARKVIDCM 146
           F  +  AL   +    A+      ++ G+AP++   ++++  Y C    F  A +V+  M
Sbjct: 105 FTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWM 164

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
             NG  P+V T++ L++ LC +G++ EAL VLD M   GC+PN  TY  ++   C  GR+
Sbjct: 165 VANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRI 224

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            EA  +L  +   G  P   TY  +++  CKVG   E   LL E+  +G TP+V+T+++ 
Sbjct: 225 HEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSY 284

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G CK G   K   L+  M      P +++ + LL+G+ +      A  + +     G+
Sbjct: 285 MDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGW 344

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + +    N+++R LC    +E   L    ++F  M KK    +  T+ IV+ +L K  + 
Sbjct: 345 DANVVNYNTVMRKLC----DEHRWLS-VVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRL 399

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +AL  L        +   IT+N +I+ L   G+ ++  LLL+ M E    P+  +Y ++
Sbjct: 400 HKALFLLR---SKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLV 456

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQ 474
           I  L + EK   A   +  +L+    P 
Sbjct: 457 IDCLCREEKFLVALCCFYQSLEDDFFPS 484



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 158/361 (43%), Gaps = 43/361 (11%)

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
           +G    V  ++ L+  L    +   A+         G  PN+ T++ ++  YC      E
Sbjct: 167 NGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHE 226

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A+++++ M  +G+ P+  T+ +LV +LCK G  +E   +L++    G  P++ TY+  + 
Sbjct: 227 AKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMD 286

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC  GR+++++ ++  + ++GL+P   T   ++DG C+   +  A  LL  + E G   
Sbjct: 287 GLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDA 346

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           NVV +NT+    C E   +  V L   M K+   P+  +++ +++ L K G++  A+ + 
Sbjct: 347 NVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALFLL 406

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           +                                            K  V    TY  +IR
Sbjct: 407 R-------------------------------------------SKEFVATVITYNTLIR 423

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L    + +E  + L+  IE G  P  IT++ VI  LC E K   AL   +   E    P
Sbjct: 424 HLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCREEKFLVALCCFYQSLEDDFFP 483

Query: 439 S 439
           S
Sbjct: 484 S 484



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/330 (19%), Positives = 139/330 (42%), Gaps = 34/330 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   + +++   G   S + +N L+ AL  +   E       E+++ G  P+  T+S 
Sbjct: 224 IHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSS 283

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +   C      ++  ++D M  NG  P+  T  IL++ +C+S     A  +L+    +G
Sbjct: 284 YMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELG 343

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR----- 240
              N+  YN +++ LC   R     ++  ++   G+ P+ +T+  V+   CK+GR     
Sbjct: 344 WDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKAL 403

Query: 241 ---------------------------SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
                                       NE   LL + IE G+ PN +T++ + +  C+E
Sbjct: 404 FLLRSKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCRE 463

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
              +  +       + +  P   ++ +++ GL+  G +    ++   ++  GF ++  + 
Sbjct: 464 EKFLVALCCFYQSLEDDFFPS--AFLSIIRGLIVGGMLGQLHTLIGCVLGQGFIIEVYIY 521

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
             L++ LC   + +   +     + E+M +
Sbjct: 522 QELIKALCKNGYCQSVEMYKVCHILERMLR 551



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 117/289 (40%), Gaps = 43/289 (14%)

Query: 222 KPDVYTYT----------------AVMDGF--------------------CKVGRSNEAM 245
           +PD   +T                AV+D                      C++ R + A 
Sbjct: 99  RPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAY 158

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E++   +  GV P+VVT++TL +G C  G   + +G+L LM +  C P+  +Y+ +++  
Sbjct: 159 EVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAY 218

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKK 364
              G+I  A  +   M+  GF       N L+  LC + ++EE D L       E+ T K
Sbjct: 219 CTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDAL------LEESTAK 272

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY   +  L K  + D++   +   +  G  P  +T N ++  +C       A
Sbjct: 273 GWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAA 332

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             LL    E     +  +Y+ ++ KL    +      L+    K+G+ P
Sbjct: 333 KRLLECSAELGWDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAP 381



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 6/223 (2%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
            P  +    ++D + KA  + +   + D +  +G   S    N LL  +   +    A +
Sbjct: 275 TPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKR 334

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
               ++  G   N   ++ ++R  C+++ +    K+   M   G  PN  TF I+V+SLC
Sbjct: 335 LLECSAELGWDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLC 394

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K GRL +AL +L     +     + TYN L++ L   G   E   +L  +   G+ P+  
Sbjct: 395 KLGRLHKALFLLRSKEFVA---TVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDI 451

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
           TY+ V+D  C+  +   A+    +++E    P+   F ++  G
Sbjct: 452 TYSLVIDCLCREEKFLVALCCFYQSLEDDFFPS--AFLSIIRG 492


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 219/470 (46%), Gaps = 23/470 (4%)

Query: 17  RRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDR------------IKAS 64
           R  H+ I  +  L + +   L       L+     L A+R ++R             +A 
Sbjct: 129 RYRHDPIVYYAMLEILSKTKLCQGAKRVLR-----LMAKRRIERRPEAFGYVMVSYSRAG 183

Query: 65  PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
            L+  + +   ++K G    +S  N  +  LVM N  + AV+F        + PN  T++
Sbjct: 184 KLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYN 243

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR- 183
            +I+ YC+ +   +A ++I  M   G  P+  ++  ++  LCK  R+KE   ++++M + 
Sbjct: 244 CLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKD 303

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P+  TYN  +  L   G  +EA E L   +    + D   Y+A++  FC+ GR ++
Sbjct: 304 SNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDK 363

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A E++NE   +G  P+VVT+ ++ NG C+E    +   +L+ M K  C P+ +SY+ LLN
Sbjct: 364 AKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLN 423

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL K G    A    +EM+    E D  + N++   + M  +  +    +A  +  +M K
Sbjct: 424 GLCKNGNSLEA----REMMNMS-EEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIK 478

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           K     P    ++I++L + +K DEA   +   +  G     + F  VI   C +  ++ 
Sbjct: 479 KGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEA 538

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           AL LL  MY   K P   +Y  +I  L +  +  +A  L    L+ G+IP
Sbjct: 539 ALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIP 588



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 196/421 (46%), Gaps = 43/421 (10%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +N L+     L+  E A++  +E    G +P+  ++  ++   C +    E R ++
Sbjct: 238 NVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLM 297

Query: 144 DCMF-DNGYHPNVTTF-----------------------------------TILVNSLCK 167
           + M  D+   P+  T+                                   + +V+S C+
Sbjct: 298 EKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCR 357

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            GR+ +A E++++M   GC P++ TY  ++ GLC   +V++A +ML  +   G KP+  +
Sbjct: 358 EGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVS 417

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           YTA+++G CK G S EA E++N + E    PN +T++ L +G+ +EG   +   L++ M 
Sbjct: 418 YTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMI 477

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           K+   P  +  + L+  L +  K+  A    ++ +  G  V+     +++ G C     +
Sbjct: 478 KKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFC-----Q 532

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           KD LE A  + + M       D  TY  +I  LGK  + +EA       + +G IP  +T
Sbjct: 533 KDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVT 592

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +  VI   C  G+++  L LL  M   ++   RT+Y+ +I KL        A  L G  L
Sbjct: 593 YRTVIHQYCRMGRVEDLLKLLEKML--SRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVL 650

Query: 468 K 468
           +
Sbjct: 651 R 651



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 180/361 (49%), Gaps = 9/361 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N  +  L      + A++F  EA       +   +S ++  +C +    +A+++++ MF
Sbjct: 313 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V T+T ++N LC+  ++ +A ++L QM + GCKPN  +Y  LL GLC  G   
Sbjct: 373 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 432

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA EM+   + D   P+  TY+ +M GF + G+S+EA +L+ E I++G  P  V  N L 
Sbjct: 433 EAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLI 492

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              C+E    +    ++      C  + ++++T+++G  +   +  A+S+  +M      
Sbjct: 493 QSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKH 552

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D     +++  L      +K  +E+A ++  KM +   +  P TY  VI    +  + +
Sbjct: 553 PDVVTYTTIIDAL-----GKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVE 607

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF-LMYEHAKIPSRTSYDML 446
           + L  L   +      RT  +N VI+ LC  G +++A  LL  ++   +KI + T + ML
Sbjct: 608 DLLKLLEKMLSRQEC-RT-AYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCH-ML 664

Query: 447 I 447
           I
Sbjct: 665 I 665



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/411 (22%), Positives = 191/411 (46%), Gaps = 26/411 (6%)

Query: 50  RSLQAQRF-VDRIKASPL------KERID----IFDSIKKDGTNWSVSDFNDLLMALVML 98
           R  + +RF VD++  S +      + R+D    I + +   G    V  +  ++  L   
Sbjct: 334 REAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQE 393

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
            + + A K   +   +G  PN+ +++ ++   C   +  EAR++++   ++ + PN  T+
Sbjct: 394 RKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITY 453

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
           ++L++   + G+  EA +++ +M + G  P     N L++ LC   +V+EA   +    N
Sbjct: 454 SVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLN 513

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +G   +V  +T V+ GFC+      A+ LL++       P+VVT+ T+ +   K+G   +
Sbjct: 514 NGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEE 573

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              L   M +   +P  ++Y T+++   + G++   + + ++M+    +      N ++ 
Sbjct: 574 ATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKML--SRQECRTAYNQVIE 631

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT-LGKGKKTDEALIHLHHAI 397
            LC  S+     LE AY++  K+ +  S  D  T  ++I + L KG      L+  + A 
Sbjct: 632 KLC--SFGN---LEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGI----PLMSYNVAC 682

Query: 398 EMGH---IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            M +   IP       V + L  EGK ++A  L+    E  +I  +   D+
Sbjct: 683 RMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQCQLDL 733


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 179/368 (48%), Gaps = 7/368 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN++L +LV      T +  F +    G+ P+  T SI+I C+C+      A  V   + 
Sbjct: 64  FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANIL 123

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             GYHPN  T   L+  LC  G +K AL   D++   G + +  +Y  L+ GLC  G  +
Sbjct: 124 KRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETK 183

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
               +L  ++   +KPD+  YT ++   CK     +A +L +E I +G++PNV T+ TL 
Sbjct: 184 AVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLI 243

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G+C  G   +   LL  MK +N  PD  +++ L++ L K GKI  A+S+F+EM      
Sbjct: 244 HGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMF 303

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +     SL+ GLC     +   LE A  + +KM ++    +  +Y I++  L KG + +
Sbjct: 304 PNIVTYTSLIDGLC-----KNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLE 358

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            A     H +  G+     T+N +I  LC  G     + L   M     +P+  ++  +I
Sbjct: 359 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTII 418

Query: 448 TKLDQLEK 455
             L  LEK
Sbjct: 419 CAL--LEK 424



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 164/330 (49%), Gaps = 5/330 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
            +F +I K G + +    N L+  L    E + A+ F  +  + G   +  ++  +I   
Sbjct: 117 SVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGL 176

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +     +++  +  +   P++  +T +++ LCK+  L +A ++  +M   G  PN+
Sbjct: 177 CKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNV 236

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  L+ G C +G ++EA+ +L  +K   + PDVYT+  ++D   K G+ +EAM L  E
Sbjct: 237 FTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEE 296

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
              + + PN+VT+ +L +G CK     + + L K MK++   P+  SY+ LL+ L K G+
Sbjct: 297 MKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGR 356

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A   F+ ++  G+ ++ R  N ++ GLC     +  L  D   +  KM  K  + + 
Sbjct: 357 LENAKQFFQHLLVKGYHLNVRTYNVMINGLC-----KAGLFGDVMDLKSKMEGKGCMPNA 411

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            T+  +I  L +  + D+A   L   I  G
Sbjct: 412 ITFKTIICALLEKDENDKAEKFLREMIARG 441



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 136/298 (45%), Gaps = 5/298 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P    F  +++SL K+ R    + +  Q    G  P++ T + L+   C++  +  A+ +
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
             N+   G  P+  T   ++ G C  G    A+   ++ + +G   + V++ TL NG CK
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G       LL+ ++  +  PD + Y+T+++ L K   +  A  ++ EM+  G   +   
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             +L+ G C+        L++A+ +  +M  K    D  T+ I+I  L K  K DEA+  
Sbjct: 239 YTTLIHGFCIMGN-----LKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSL 293

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                     P  +T+ ++I  LC    +++A+ L   M E    P+  SY +L+  L
Sbjct: 294 FEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDAL 351



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 101/201 (50%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L +  D++  +   G + +V  +  L+    ++   + A    +E     + P+ +TF+I
Sbjct: 217 LGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNI 276

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I     +    EA  + + M      PN+ T+T L++ LCK+  L+ A+ +  +M   G
Sbjct: 277 LIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 336

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+ +Y  LL  LC  GR+E A +   ++   G   +V TY  +++G CK G   + M
Sbjct: 337 IQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVM 396

Query: 246 ELLNEAIERGVTPNVVTFNTL 266
           +L ++   +G  PN +TF T+
Sbjct: 397 DLKSKMEGKGCMPNAITFKTI 417



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 2/167 (1%)

Query: 36  SLSTAESLDLKE-NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLM 93
           + S    + LK  NP        +D + K   + E + +F+ +K      ++  +  L+ 
Sbjct: 255 AFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLID 314

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
            L   +  E A+    +    G+ PN ++++I++   C       A++    +   GYH 
Sbjct: 315 GLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHL 374

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           NV T+ +++N LCK+G   + +++  +M   GC PN  T+  ++  L
Sbjct: 375 NVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICAL 421



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 9/207 (4%)

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +A+   N  +     P    FN + +   K       + L K  +     PD  + S L+
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           N       I  A S+F  +++ G+  +   +N+L++GLC         ++ A    +K+ 
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGE-----IKRALHFHDKVV 158

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI--PRTITFNNVIQALCGEGK 420
            +    D  +YG +I  L K  +T +A+  L   +E GH   P  + +  +I  LC    
Sbjct: 159 AQGFQLDQVSYGTLINGLCKAGET-KAVARLLRKLE-GHSVKPDLVMYTTIIHCLCKNKL 216

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +  A  L   M      P+  +Y  LI
Sbjct: 217 LGDACDLYSEMIVKGISPNVFTYTTLI 243


>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera]
 gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 224/463 (48%), Gaps = 28/463 (6%)

Query: 12  FTNTNRRNHNKIP-QFNKLVVFAAASLSTAESL--DLKENPRSLQAQRFVDRIKA----- 63
           +TN  R +H       ++LV  +A     AE L   +KE   ++    F+   +A     
Sbjct: 42  YTNGFRHSHQTFSLMISRLV--SANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVH 99

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
            PL + + +F  +K+     S   +  +   LV  N+ + A++F+      G+ P+  + 
Sbjct: 100 KPL-DAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASL 158

Query: 124 SIMIRCYC-NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           +++I+  C N      A ++   M + G  P+  T+  L+N LC+ G++ EA E+  +M 
Sbjct: 159 NVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEME 218

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              C P + TY  L+ GLC    ++ A  +L  + + G+KP+V+TY+++MDG CK G S+
Sbjct: 219 TKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSS 278

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
            A+ELL+  + R   PN++T++TL +G CKEG   + V +L  MK +   PD   Y  ++
Sbjct: 279 RALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKII 338

Query: 303 NGLLKWGKIRPAVSIFKEMV-------RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           +G     K   A +   EMV       R  + +  R+ N +++GLC +          A+
Sbjct: 339 SGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNR------AF 392

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           Q++  M  +    D  T+  ++          +A   +   +  G IP  +T+N V+ A 
Sbjct: 393 QLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAF 452

Query: 416 CGEGKIDKA--LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
               K+ ++  L+ + LM EH K+    + D LI K+ + + S
Sbjct: 453 WDRRKVRESAELVQVELMVEHRKMGPDNTND-LIWKVQETDSS 494



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 144/330 (43%), Gaps = 6/330 (1%)

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
           + NG+  +  TF+++++ L  +   + A E+L +M    C      +  + +    V + 
Sbjct: 42  YTNGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKP 101

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            +A  +   +K    +P   +Y  V        +   A+       E G+ P+V + N L
Sbjct: 102 LDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVL 161

Query: 267 FNGYCK-EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
               CK  GT    + + + M  R C PD  +Y TL+NGL + GKI  A  +FKEM    
Sbjct: 162 IKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKA 221

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                    SL+ GLC    + KDL + A ++ E+M  K    +  TY  ++    K   
Sbjct: 222 CSPTVVTYTSLIHGLC----QSKDL-DSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGC 276

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           +  AL  L   +   H+P  IT++ ++  LC EGK+ +A+ +L  M      P    Y  
Sbjct: 277 SSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGK 336

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +I+    + K ++A       +  G+ P R
Sbjct: 337 IISGFCDICKFHEAANFLDEMVLGGISPNR 366


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 187/389 (48%), Gaps = 5/389 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  FN +L +   +    TAV         G+ P+ +T +I+I C+C+         V+ 
Sbjct: 307 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLA 366

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY P+  T   L+  LC  G++K+AL   D++   G + N  +Y  L+ G+C +G
Sbjct: 367 KILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 426

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A ++L  +     KP+V  Y+ ++D  CK    +EA  L +E   +G++ +VVT++
Sbjct: 427 DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYS 486

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL  G+C  G   + +GLL  M  +   PD  +Y+ L++ L K GK++ A S+   M++ 
Sbjct: 487 TLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKA 546

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             + D    N+L+ G  +  +E K     A  VF  M+      D  TY I+I    K K
Sbjct: 547 CVKPDVFTYNTLMNGYLL-VYEVK----KAQHVFNAMSLMGVTPDVHTYTILINGFCKSK 601

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             DEAL       +   +P T+T+++++  LC  G+I     L+  M +  +     +Y+
Sbjct: 602 MVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYN 661

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            LI  L +      A AL+     QG+ P
Sbjct: 662 SLIDGLCKNGHLDKAIALFNKMKDQGIRP 690



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 187/354 (52%), Gaps = 7/354 (1%)

Query: 77  KKDG--TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           K DG  T  +V  ++ ++ AL        A   FSE +  G++ +  T+S +I  +C   
Sbjct: 437 KIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVG 496

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
              EA  +++ M     +P+V T+TILV++L K G++KEA  VL  M +   KP++ TYN
Sbjct: 497 KLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYN 556

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+ G   V  V++A  +   +   G+ PDV+TYT +++GFCK    +EA+ L  E  ++
Sbjct: 557 TLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQK 616

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
            + P+ VT+++L +G CK G       L+  M+ R    D I+Y++L++GL K G +  A
Sbjct: 617 NMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKA 676

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           +++F +M   G   +      LL GLC     +   L+DA +VF+ +  K    D   Y 
Sbjct: 677 IALFNKMKDQGIRPNTFTFTILLDGLC-----KGGRLKDAQEVFQDLLTKGYHLDVYIYN 731

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           ++I    K    +EAL  L    E G IP  +TF+ +I AL  + + DKA  LL
Sbjct: 732 VMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLL 785



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 198/407 (48%), Gaps = 5/407 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +   D +   G   +   +  L+  +  + +   A+K   +       PN   +S 
Sbjct: 393 VKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYST 452

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G   +V T++ L+   C  G+LKEA+ +L++M    
Sbjct: 453 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKT 512

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+++TY  L+  L   G+V+EA  +L  +    +KPDV+TY  +M+G+  V    +A 
Sbjct: 513 INPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQ 572

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + N     GVTP+V T+  L NG+CK     + + L K M ++N +PD ++YS+L++GL
Sbjct: 573 HVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGL 632

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I     +  EM   G   D    NSL+ GLC         L+ A  +F KM  + 
Sbjct: 633 CKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGH-----LDKAIALFNKMKDQG 687

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  T+ I++  L KG +  +A       +  G+      +N +I   C +G +++AL
Sbjct: 688 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEAL 747

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            +L  M E+  IP+  ++D++I  L + +++  A  L    + +G++
Sbjct: 748 TMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 146/280 (52%), Gaps = 1/280 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        VD + K   +KE   +   + K      V  +N L+   +++ E + A  
Sbjct: 514 NPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQH 573

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F+  S  G+ P+  T++I+I  +C      EA  +   M      P+  T++ LV+ LC
Sbjct: 574 VFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLC 633

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSGR+    +++D+M   G   ++ TYN L+ GLC  G +++A  +   +K+ G++P+ +
Sbjct: 634 KSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTF 693

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+T ++DG CK GR  +A E+  + + +G   +V  +N +  G+CK+G   + + +L  M
Sbjct: 694 TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKM 753

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
           ++  C+P+ +++  ++N L K  +   A  + ++M+  G 
Sbjct: 754 EENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 161/341 (47%), Gaps = 31/341 (9%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P++ T + +I+  C K    EA    D +   G+  N  ++  L+N +C+ G  + A
Sbjct: 58  GYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAA 117

Query: 175 LEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           ++ L ++ GR+  KPN++ YN ++  LC    V EAY +   +   G+  +V TY+ ++ 
Sbjct: 118 IKFLRKIDGRLA-KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIY 176

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           GFC VG+  EA+ LLN  + + + PNV T+N L +  CKEG   +   +L +M K     
Sbjct: 177 GFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKS 236

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL--- 350
           + I+YSTL++G     +++ A  +F  M   G   D    N ++ G C     +K L   
Sbjct: 237 NVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLF 296

Query: 351 ----------------LEDAYQVFEKMTKKVSVT----------DPGTYGIVIRTLGKGK 384
                           + D++   +  +  VS++          D  T  I+I       
Sbjct: 297 KEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMG 356

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           +       L   ++ G+ P T+T N +I+ LC +G++ KAL
Sbjct: 357 QITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKAL 397



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/472 (24%), Positives = 195/472 (41%), Gaps = 64/472 (13%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE +   D +   G   +   +  L+  +  + +   A+KF  +       PN   ++ 
Sbjct: 79  VKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNT 138

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G   NV T++ L+   C  G+LKEAL +L+ M    
Sbjct: 139 IIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKT 198

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ TYN L+  LC  G+V+EA  +L  +    +K +V TY+ +MDG+  V    +A 
Sbjct: 199 INPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQ 258

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM------------------- 286
            + N     GVTP+V ++N + NG+CK     K + L K M                   
Sbjct: 259 HVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFA 318

Query: 287 ---------------KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
                          + +   PD  + + L+N     G+I    S+  ++++ G+     
Sbjct: 319 KMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTV 378

Query: 332 MMNSLLRGLCMKSWEEK------DLLEDAYQVFE--------------------KMTKKV 365
            +N+L++GLC+K   +K       LL   +Q+ +                    K+ +K+
Sbjct: 379 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKI 438

Query: 366 S--VTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
              +T P    Y  +I  L K +   EA          G     +T++ +I   C  GK+
Sbjct: 439 DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKL 498

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +A+ LL  M      P   +Y +L+  L +  K  +A ++    LK  V P
Sbjct: 499 KEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 187/439 (42%), Gaps = 42/439 (9%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        VD + K   +KE   +   + K     +V  ++ L+    ++ E + A  
Sbjct: 200 NPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQH 259

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F+  S  G+ P+  +++IMI  +C      +A  +   M  + + P +  F  +++S  
Sbjct: 260 VFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSFA 318

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K      A+ +  ++   G +P++ T N L+   C++G++   + +L  +   G  P   
Sbjct: 319 KMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTV 378

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T   ++ G C  G+  +A+   ++ + +G   N V++ TL NG CK G     + LL+ +
Sbjct: 379 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKI 438

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
             R   P+   YST+++ L K+  +  A  +F EM   G   D    ++L+ G C+    
Sbjct: 439 DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGK- 497

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA----------------- 389
               L++A  +  +M  K    D  TY I++  LGK  K  EA                 
Sbjct: 498 ----LKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVF 553

Query: 390 ----------LI-------HLHHAIE-MGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
                     L+       H+ +A+  MG  P   T+  +I   C    +D+AL L   M
Sbjct: 554 TYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEM 613

Query: 432 YEHAKIPSRTSYDMLITKL 450
           ++   +P   +Y  L+  L
Sbjct: 614 HQKNMVPDTVTYSSLVDGL 632



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 131/277 (47%), Gaps = 41/277 (14%)

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA------------------YEMLMN 215
           +L VL ++ + G  P+  T N L+KGLC  G+V+EA                  Y  L+N
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 216 ---------------VKNDG--LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
                           K DG   KP+V  Y  ++D  CK    +EA  L +E   +G++ 
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           NVVT++TL  G+C  G   + +GLL +M  +   P+  +Y+ L++ L K GK++ A S+ 
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
             M++   + +    ++L+ G  +  +E K     A  VF  M+      D  +Y I+I 
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFL-VYEVK----KAQHVFNAMSLMGVTPDVHSYNIMIN 281

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
              K K+ D+AL +L   + +   P  I FN ++ + 
Sbjct: 282 GFCKIKRVDKAL-NLFKEMILSRFPPIIQFNKILDSF 317


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 185/380 (48%), Gaps = 9/380 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + +F  +        V  +  L+  L   +  + AV    E    G  P+  
Sbjct: 181 KVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPV 240

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+++I   C K D     K++D MF  G  PN  T+  L++ LC  G+L++A+ +LD+M
Sbjct: 241 TFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRM 300

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C PN+ TY  ++ GL   GR  +   +L  ++  G   + Y Y+A++ G  K G+S
Sbjct: 301 VSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKS 360

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EAM+L  E   +    N + ++ + +G C++G P + + +L  M    C P+  +YS+L
Sbjct: 361 QEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSL 420

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G  + G    A+ ++K+M +  F  +E   + L+ GLC     +   +++A  V+ +M
Sbjct: 421 MKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLC-----KDGKVKEAMMVWAQM 475

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI---EMGHIPRTITFNNVIQALCGE 418
             K    D   YG +I  L      ++AL  L++ +   E    P  +T+N ++ ALC +
Sbjct: 476 LGKGCKPDVVAYGSMINGLSNAGLVEDAL-QLYNEMLCQEPDSQPDVVTYNILLNALCKQ 534

Query: 419 GKIDKALLLLFLMYEHAKIP 438
             I +A+ LL  M +    P
Sbjct: 535 SSISRAIDLLNSMLDRGCDP 554



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 206/420 (49%), Gaps = 11/420 (2%)

Query: 62  KASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSE---ASSYGLA 117
           KA   ++ + +FD +  +     +V  FN +L  ++       A++F++    A    ++
Sbjct: 107 KAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNIS 166

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN  TF+++I+  C      +A ++   M  +   P+V T+  L++ LCK+ R+ EA+ +
Sbjct: 167 PNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSL 226

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           LD+M   GC P+  T+N L+ GLC  G +    +++ N+   G  P+  TY  ++ G C 
Sbjct: 227 LDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCL 286

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G+  +A+ LL+  +     PNVVT+ T+ NG  K+G  + G  +L LM++R    ++  
Sbjct: 287 KGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYV 346

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           YS L++GL K GK + A+ +FKEM     E++  + ++++ GLC          ++A +V
Sbjct: 347 YSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKP-----DEALEV 401

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
             +MT      +  TY  +++   +     +A+       +       + ++ +I  LC 
Sbjct: 402 LSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCK 461

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
           +GK+ +A+++   M      P   +Y  +I  L       DA  LY   L Q   P  +P
Sbjct: 462 DGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQE--PDSQP 519



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 183/428 (42%), Gaps = 83/428 (19%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCM------------------FDNGYHP---------- 153
           TF  +I  Y N  DF    KV+D M                  +   + P          
Sbjct: 62  TFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRM 121

Query: 154 --------NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK-----PNIQTYNCLLKGL 200
                    V +F  ++N + + G    ALE  + +  IG K     PN+ T+N ++K +
Sbjct: 122 AYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHV--IGAKGVNISPNVLTFNLVIKTM 179

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE---------- 250
           C VG V++A +M  ++     +PDVYTY  +MDG CK  R +EA+ LL+E          
Sbjct: 180 CKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSP 239

Query: 251 -------------------------AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
                                       +G  PN VT+NTL +G C +G   K + LL  
Sbjct: 240 VTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDR 299

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M    C+P+ ++Y T++NGL+K G+      +   M   G+ V+E + ++L+ GL  +  
Sbjct: 300 MVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGK 359

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                 ++A Q+F++MT K    +   Y  VI  L +  K DEAL  L         P  
Sbjct: 360 S-----QEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNA 414

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
            T++++++     G   KA+ +   M +H    +   Y +LI  L +  K  +A  ++  
Sbjct: 415 YTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQ 474

Query: 466 ALKQGVIP 473
            L +G  P
Sbjct: 475 MLGKGCKP 482



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 141/305 (46%), Gaps = 21/305 (6%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L    + + A++ F E +      N+  +S +I   C      EA +V+  M 
Sbjct: 347 YSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMT 406

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +N   PN  T++ L+    ++G   +A+E+   M +     N   Y+ L+ GLC  G+V+
Sbjct: 407 NNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 466

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI--ERGVTPNVVTFNT 265
           EA  +   +   G KPDV  Y ++++G    G   +A++L NE +  E    P+VVT+N 
Sbjct: 467 EAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNI 526

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L N  CK+ +  + + LL  M  R C PD ++    L  L +  K+ P            
Sbjct: 527 LLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLRE--KLDPP----------- 573

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              D R     L GL ++  + + +L  A ++ E M +K+    P T+  V+  L   KK
Sbjct: 574 --QDGR---EFLDGLVVRLLKRQRVL-GASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKK 627

Query: 386 TDEAL 390
              A+
Sbjct: 628 VQAAI 632


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 193/413 (46%), Gaps = 6/413 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K+ + +F  +   G   + + +N L+  L    +   A+  + + +  G+ P   T+  +
Sbjct: 369 KDAVSLFKEMADSGIPDAFT-YNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           + CYC      EA K+   M   G+ PNV T+T L+          +A  +L +M + G 
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
             N  TYN L+ GLC VGRV E  EML   + +G  P   TY ++++GF K G    A  
Sbjct: 488 SCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFA 547

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           +  +   +G+ PN+VT+ +  +GYCK       + +L  ++ +   PD  +Y++L+ G  
Sbjct: 548 VYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFC 607

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           + G +  A+ +   M++ G   +  + NS + G     ++   ++E+A + +EKM K+  
Sbjct: 608 QEGNMSHALQVLVLMLKDGLLPNISVYNSFITG-----YKNLKMMEEALRFYEKMIKEGI 662

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D  TY  +I    K      AL      +  G+IP  ITF  +   LC  G ID A  
Sbjct: 663 DLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARK 722

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           LL  M      P+   Y+MLI    +  K  +A  L+   L++ ++P     D
Sbjct: 723 LLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYD 775



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 191/382 (50%), Gaps = 5/382 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E +++++ + + G    +  ++ LL+   +    + AVK ++E    G  PN  T++ 
Sbjct: 402 IREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTT 461

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++ + NK  F +A  ++  M  NG   N  T+  L+N LC  GR+ E  E+L +    G
Sbjct: 462 LMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEG 521

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P   TYN ++ G    G +  A+ +   +   G+ P++ TYT+ +DG+CK    + A+
Sbjct: 522 FVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLAL 581

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++LN+   +G+ P++  +N+L  G+C+EG     + +L LM K   LP+   Y++ + G 
Sbjct: 582 KMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGY 641

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
                +  A+  +++M++ G ++D     +L+ G     + +   +  A +++ +M  K 
Sbjct: 642 KNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDG-----FSKDGNVTFALKLYSEMVAKG 696

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           ++ D  T+  +   L +    D+A   L     +   P  + +N +I      GK+ +A 
Sbjct: 697 NIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAF 756

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
            L   M E   +P  T+YD+L+
Sbjct: 757 RLHDEMLERKIMPDDTTYDILV 778



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 161/376 (42%), Gaps = 6/376 (1%)

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           S++  G         DLL           A+   +E    G   ++W F +++R    + 
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEG 191

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
            + +A ++ D M  +   P+    ++ + SLCK      AL VL +M   G  P   T+N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            ++  L   GR+EEA  +   +   G K  V   T +M G+C      +A+++  E +  
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           G+ P  VT+  L  G  +EG P K   L + M+    LP    ++ ++ GLL     + A
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           VS+FKEM   G   D    N L+  LC     ++  + +A  ++EKM +        TY 
Sbjct: 372 VSLFKEMADSGIP-DAFTYNILIHWLC-----QRRKIREALNLWEKMNETGVKPYIVTYH 425

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            ++         DEA+         G  P  +T+  +++    +   DKA  LL  M ++
Sbjct: 426 SLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQN 485

Query: 435 AKIPSRTSYDMLITKL 450
               +  +Y+ LI  L
Sbjct: 486 GVSCNDYTYNTLINGL 501



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 1/253 (0%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IKA  +     ++  +   G   ++  +   +      +  + A+K  ++    GL P+ 
Sbjct: 537 IKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDI 596

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             ++ +I  +C + +   A +V+  M  +G  PN++ +   +        ++EAL   ++
Sbjct: 597 AAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEK 656

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + G   +  TY  L+ G    G V  A ++   +   G  PD  T+TA+  G C+ G 
Sbjct: 657 MIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGD 716

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++A +LL+E     + PNV+ +N L NGY + G   +   L   M +R  +PD  +Y  
Sbjct: 717 IDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDI 776

Query: 301 LLNGLLKWGKIRP 313
           L+ G+   G   P
Sbjct: 777 LV-GMKSLGSDSP 788



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/258 (20%), Positives = 107/258 (41%), Gaps = 44/258 (17%)

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           ++  G   D + +  VM    K G  ++A+ L +E     + P+    +      CK   
Sbjct: 168 MRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             + + +L+ M+    +P   +++++++ L+K G++  A+ I  E++  G ++   +  +
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+ G C++    K     A  +FE+  +                                
Sbjct: 288 LMHGYCLQREVRK-----ALDIFEETLRD------------------------------- 311

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL--DQL 453
               G +P  +T+  +I+    EG  +KA  L   M +H  +PS   ++M+I  L  D+L
Sbjct: 312 ----GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKL 367

Query: 454 EKSYDACALYGAALKQGV 471
            K  DA +L+      G+
Sbjct: 368 WK--DAVSLFKEMADSGI 383


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 161/317 (50%), Gaps = 5/317 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FD +++ G       +  ++  L    E E A K   E  +  L  +  T++++I  YC 
Sbjct: 384 FDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCK 443

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           +    EA ++ + M   G  PNV T+T L + LCK G ++ A E+L +M   G + N  T
Sbjct: 444 RGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACT 503

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN L+ GLC  G +E+A   + ++    LKPDVYTYT ++D  CK G  + A  LL E +
Sbjct: 504 YNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEML 563

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           ++G+ P +VT+N L NG+C  G    G  LL  M ++N  P+  +Y++L+        ++
Sbjct: 564 DKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMK 623

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
               I+K M       +E   N L++G C    + +++ E  Y   E + K   +T   +
Sbjct: 624 STTEIYKGMRSRDVGPNENTYNILIKGHC----KARNMKEALYFHDEMIQKGFRLT-ATS 678

Query: 373 YGIVIRTLGKGKKTDEA 389
           Y  +IR L K KK  EA
Sbjct: 679 YSALIRLLNKKKKFVEA 695



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 188/418 (44%), Gaps = 47/418 (11%)

Query: 65  PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           PL E I++F  +     + +V  +N LL AL      + A + F E +S   AP+  T+ 
Sbjct: 243 PLDEAIELFQELP----HKNVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYG 295

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL------ 178
           I+I  +C   +   A K++D M   G  PN T +T +V  LC  G + +AL V+      
Sbjct: 296 ILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQR 355

Query: 179 -----------------------------DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
                                        D+M R G   +  TY  ++ GLC    +EEA
Sbjct: 356 KVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEA 415

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            ++L  +    L  D  TYT ++DG+CK G+  EA ++ N  ++RGVTPNVVT+  L +G
Sbjct: 416 EKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDG 475

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            CK+G       LL  M  +    +  +Y++L+NGL K G +  A+    +M     + D
Sbjct: 476 LCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPD 535

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                +L+  LC KS +    L+ A+ + ++M  K       TY +++       + +  
Sbjct: 536 VYTYTTLIDALC-KSGD----LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 590

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              L   +E    P   T+N++++  C E  +     +   M      P+  +Y++LI
Sbjct: 591 KKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILI 648



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 202/454 (44%), Gaps = 47/454 (10%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS-- 120
           A  +K+   +FD +    +   V  +  L+     L E E AVK   E  + G+ PN+  
Sbjct: 272 AGRVKDARQLFDEM---ASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATV 328

Query: 121 ------------WT---------------------FSIMIRCYCNKNDFFEARKVIDCMF 147
                       W                      ++ ++  +CNK D   AR+  D M 
Sbjct: 329 YTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQ 388

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G   +  T+T ++N LC++  L+EA ++L +M       +  TY  L+ G C  G++ 
Sbjct: 389 RKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMA 448

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA++M   +   G+ P+V TYTA+ DG CK G    A ELL+E   +G+  N  T+N+L 
Sbjct: 449 EAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLI 508

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG CK G   + +  +  M      PD  +Y+TL++ L K G +  A S+ +EM+  G +
Sbjct: 509 NGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIK 568

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT--LGKGKK 385
                 N L+ G CM        +E   ++ + M +K    +  TY  +++   +    K
Sbjct: 569 PTIVTYNVLMNGFCMSGR-----VEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMK 623

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           +   +     + ++G  P   T+N +I+  C    + +AL     M +     + TSY  
Sbjct: 624 STTEIYKGMRSRDVG--PNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSA 681

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           LI  L++ +K  +A  L+    K+G+  +    D
Sbjct: 682 LIRLLNKKKKFVEARELFHDMRKEGLTAESDVYD 715



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 170/361 (47%), Gaps = 8/361 (2%)

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
           +A ++F E    GLA +  T++ MI   C   +  EA K++  M+      +  T+T+L+
Sbjct: 379 SARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLI 438

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
           +  CK G++ EA ++ + M + G  PN+ TY  L  GLC  G V+ A E+L  + N GL+
Sbjct: 439 DGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLE 498

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
            +  TY ++++G CK G   +AM  + +     + P+V T+ TL +  CK G   +   L
Sbjct: 499 LNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSL 558

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L+ M  +   P  ++Y+ L+NG    G++     +   M+      +    NSL++  C+
Sbjct: 559 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCI 618

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
           +     + ++   ++++ M  +    +  TY I+I+   K +   EAL      I+ G  
Sbjct: 619 E-----NNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFR 673

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT---KLDQLEKSYDA 459
               +++ +I+ L  + K  +A  L   M +         YD  I      D LE +   
Sbjct: 674 LTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLAL 733

Query: 460 C 460
           C
Sbjct: 734 C 734



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 163/331 (49%), Gaps = 14/331 (4%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           +F    H NV ++ IL+ +LC +GR+K+A ++ D+M      P++ TY  L+ G C +G 
Sbjct: 250 LFQELPHKNVCSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGILIHGHCALGE 306

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +E A ++L  +   G++P+   YT+V+   C  G  ++A+ ++ + ++R V  +   + T
Sbjct: 307 LENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTT 366

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + +G+C +G  +        M+++    D ++Y+T++NGL +  ++  A  + +EM    
Sbjct: 367 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARR 426

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            +VDE     L+ G C     ++  + +A+Q+   M ++    +  TY  +   L K   
Sbjct: 427 LDVDEVTYTVLIDGYC-----KRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGD 481

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
              A   LH     G      T+N++I  LC  G +++A+  +  M      P   +Y  
Sbjct: 482 VQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTT 541

Query: 446 LITKLDQLEKSYD---ACALYGAALKQGVIP 473
           LI   D L KS D   A +L    L +G+ P
Sbjct: 542 LI---DALCKSGDLDRAHSLLQEMLDKGIKP 569



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 140/281 (49%), Gaps = 14/281 (4%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           L EA+E+  ++       N+ +YN LLK LC  GRV++A ++   + +    PDV TY  
Sbjct: 244 LDEAIELFQELPH----KNVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGI 296

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++ G C +G    A++LL+E +  GV PN   + ++    C +G     + +++ M +R 
Sbjct: 297 LIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK 356

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
            + D+  Y+T+L+G    G +  A   F EM R G   D     +++ GLC ++ E    
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLC-RAVE---- 411

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA-IEMGHIPRTITFN 409
           LE+A ++ ++M  +    D  TY ++I    K  K  EA   +H+A ++ G  P  +T+ 
Sbjct: 412 LEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAF-QMHNAMVQRGVTPNVVTYT 470

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            +   LC +G +  A  LL  M       +  +Y+ LI  L
Sbjct: 471 ALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGL 511



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 3/290 (1%)

Query: 40  AESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           A  LD+ E   ++    +  R K   + E   + +++ + G   +V  +  L   L    
Sbjct: 424 ARRLDVDEVTYTVLIDGYCKRGK---MAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQG 480

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           + + A +   E S+ GL  N+ T++ +I   C      +A + +  M      P+V T+T
Sbjct: 481 DVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYT 540

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L+++LCKSG L  A  +L +M   G KP I TYN L+ G C  GRVE   ++L  +   
Sbjct: 541 TLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEK 600

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            + P+  TY ++M  +C         E+      R V PN  T+N L  G+CK     + 
Sbjct: 601 NIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEA 660

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           +     M ++       SYS L+  L K  K   A  +F +M + G   +
Sbjct: 661 LYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAE 710



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 2/169 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  L     +   +   G   ++  +N L+    M    E   K         + PN+ 
Sbjct: 548 KSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAA 607

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +++ YC +N+     ++   M      PN  T+ IL+   CK+  +KEAL   D+M
Sbjct: 608 TYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEM 667

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL--KPDVYTY 228
            + G +    +Y+ L++ L    +  EA E+  +++ +GL  + DVY +
Sbjct: 668 IQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDF 716


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 213/437 (48%), Gaps = 8/437 (1%)

Query: 37  LSTAESLDLKENPRS--LQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLM 93
           +S+  SL   +NP    +Q  + +   +KA      + +   ++ +G       FN L+ 
Sbjct: 54  ISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILIN 113

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
               L     +   F +    G  PN+ TF+ +I+  C K    +A    D +   G+H 
Sbjct: 114 CFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHL 173

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           +  ++  L+N LCK GR+  AL++L ++     +PN   YN ++  +C    V +A+++ 
Sbjct: 174 DQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLY 233

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +    + PD +T  +++ GFC +G+  EA+ LL++ I   + P + TF+ L + +CKE
Sbjct: 234 SQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKE 293

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +   +L +  K++ + D ++Y++L++G     +I  A  IF  M   G   + +  
Sbjct: 294 GKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSY 353

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            +++ GLC     +  ++++A  +FE+M  +  + +  TY  +I  LGK  K    L  +
Sbjct: 354 TTMINGLC-----KIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLV 408

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
               + G  P  IT+N+++ ALC    +DKA+ LL  + +    P   +Y +LI  L Q 
Sbjct: 409 DEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQS 468

Query: 454 EKSYDACALYGAALKQG 470
            K  DA  ++   L +G
Sbjct: 469 GKLEDAQKVFEDLLVKG 485



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 182/389 (46%), Gaps = 5/389 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  FN +L +LV      TA+    +    G+  + +TF+I+I C+        +  V  
Sbjct: 70  IIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFG 129

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   G+ PN  TF  L+  LC  G + +AL   D++   G   +  +Y  L+ GLC VG
Sbjct: 130 KILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVG 189

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R+  A ++L  V    ++P+   Y  ++D  CK    N+A +L ++ + + ++P+  T N
Sbjct: 190 RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCN 249

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           +L  G+C  G   + VGLL  M   N  P   ++S L++   K GK++ A  +    ++ 
Sbjct: 250 SLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKK 309

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
              +D    NSL+ G C+     K     A  +F+ M  +  + +  +Y  +I  L K K
Sbjct: 310 DIILDVVTYNSLMDGYCLVKEINK-----AKDIFDSMASRGVIANVQSYTTMINGLCKIK 364

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             DEA+           IP  +T+N++I  L   GKI   L L+  M++  + P+  +Y+
Sbjct: 365 MVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYN 424

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++  L +      A AL      QG+ P
Sbjct: 425 SILDALCKNHHVDKAIALLTNLKDQGIRP 453



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 179/360 (49%), Gaps = 11/360 (3%)

Query: 34  AASLSTAESLDLK-ENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDF--N 89
            A+L   + +D K   P ++     +D + KA  + +  D++  +       S  DF  N
Sbjct: 192 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV--AKRISPDDFTCN 249

Query: 90  DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
            L+    ++ + + AV    +     + P  +TFSI++  +C +    EA+ ++      
Sbjct: 250 SLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKK 309

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
               +V T+  L++  C    + +A ++ D M   G   N+Q+Y  ++ GLC +  V+EA
Sbjct: 310 DIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEA 369

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             +   ++   + P+V TY +++DG  K+G+ +  ++L++E  +RG  PN++T+N++ + 
Sbjct: 370 VNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDA 429

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            CK     K + LL  +K +   PD  +Y+ L+ GL + GK+  A  +F++++  G+ +D
Sbjct: 430 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLD 489

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                 +++G C+K      L + A  +  KM     + +  TY IVI +L +  + D A
Sbjct: 490 VYTYTVMIQGFCVKG-----LFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMA 544



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 165/325 (50%), Gaps = 5/325 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   +S+  +  ++P+ +T + +I  +C      EA  ++  M     +P + TF+ILV+
Sbjct: 229 AFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVD 288

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           + CK G++KEA  +L    +     ++ TYN L+ G C V  + +A ++  ++ + G+  
Sbjct: 289 AFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIA 348

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V +YT +++G CK+   +EA+ L  E   R + PNVVT+N+L +G  K G     + L+
Sbjct: 349 NVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLV 408

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M  R   P+ I+Y+++L+ L K   +  A+++   +   G   D      L++GLC  
Sbjct: 409 DEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLC-- 466

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   LEDA +VFE +  K    D  TY ++I+        D AL  L    + G IP
Sbjct: 467 ---QSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIP 523

Query: 404 RTITFNNVIQALCGEGKIDKALLLL 428
              T+  VI +L  + + D A  LL
Sbjct: 524 NAKTYEIVILSLFEKDENDMAEKLL 548



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 145/321 (45%), Gaps = 5/321 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +  F  +++SL K+     AL +  QM   G   +  T+N L+     +G    ++ +
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G  P+  T+  ++ G C  G  ++A+   ++ + +G   + V++ TL NG CK
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCK 187

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     + LLK +  +   P+ + Y+ +++ + K   +  A  ++ +MV      D+  
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFT 247

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            NSL+ G C+        L++A  +  KM  +       T+ I++    K  K  EA + 
Sbjct: 248 CNSLIYGFCIMGQ-----LKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMM 302

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L   ++   I   +T+N+++   C   +I+KA  +   M     I +  SY  +I  L +
Sbjct: 303 LGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCK 362

Query: 453 LEKSYDACALYGAALKQGVIP 473
           ++   +A  L+     + +IP
Sbjct: 363 IKMVDEAVNLFEEMRCRKIIP 383



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 100/195 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +++F+ ++      +V  +N L+  L  L +    +K   E    G  PN  
Sbjct: 362 KIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNII 421

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C  +   +A  ++  + D G  P++ T+T+L+  LC+SG+L++A +V + +
Sbjct: 422 TYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDL 481

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   ++ TY  +++G C  G  + A  +L  ++++G  P+  TY  V+    +   +
Sbjct: 482 LVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDEN 541

Query: 242 NEAMELLNEAIERGV 256
           + A +LL E I RG+
Sbjct: 542 DMAEKLLREMIARGL 556



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/246 (19%), Positives = 102/246 (41%), Gaps = 30/246 (12%)

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
           TP ++ FN + +   K       + L + M+    + D  +++ L+N   + G    + S
Sbjct: 67  TPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFS 126

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-------------------------- 350
           +F ++++ GF+ +    N+L++GLC+K    + L                          
Sbjct: 127 VFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLC 186

Query: 351 ----LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
               +  A Q+ +++  K+   +   Y ++I  + K K  ++A       +     P   
Sbjct: 187 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDF 246

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           T N++I   C  G++ +A+ LL  M      P   ++ +L+    +  K  +A  + G  
Sbjct: 247 TCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVT 306

Query: 467 LKQGVI 472
           +K+ +I
Sbjct: 307 MKKDII 312


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 192/414 (46%), Gaps = 5/414 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E + +   ++  G + +   +N L+  L    E E A +   +    GL  + +
Sbjct: 214 KKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVY 273

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +IR YC K    EA ++ + M   G  P V T+  ++  LCK GR+ +A ++LD M
Sbjct: 274 TYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVM 333

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P++ +YN L+ G   +G + EA+ +   ++   L P V TY  ++DG C++G  
Sbjct: 334 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDL 393

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + AM L +E I+ G  P+V TF T   G+CK G       L   M  R   PD+ +Y T 
Sbjct: 394 DVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITR 453

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G LK G    A  + +EM+  GF  D    N  + GL      +   L++A ++ +KM
Sbjct: 454 IVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL-----HKLGNLKEASELVKKM 508

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                V D  TY  +I          +A       +  G  P  +T+  +I +    G++
Sbjct: 509 LYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRL 568

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
             A+L  F M+E    P+  +Y+ LI  L ++ K   A   +     +G+ P +
Sbjct: 569 KLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNK 622



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 192/405 (47%), Gaps = 35/405 (8%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK-NDFFEARKVIDCMFDNGYHPNVTTFTI 160
           E  +  F +  S GL P+    + ++R   ++ N+   AR+V + M + G  P V T+  
Sbjct: 148 EKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNT 207

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           +++S CK G ++EAL++L QM  +GC PN  TYN L+ GL + G +E+A E++ ++   G
Sbjct: 208 MLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLG 267

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           L+  VYTY  ++ G+C+ G+  EA  L  E + RG  P VVT+NT+  G CK G      
Sbjct: 268 LEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDAR 327

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            LL +M  +N +PD +SY+TL+ G  + G I  A  +F E+            N+L+ GL
Sbjct: 328 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGL 387

Query: 341 C---------------MKSWEEKDL---------------LEDAYQVFEKMTKKVSVTDP 370
           C               +K   + D+               L  A ++F++M  +     P
Sbjct: 388 CRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNR--GLQP 445

Query: 371 GTYGIVIRTLGKGKKTD--EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             +  + R +G+ K  D  +A       +  G  P  IT+N  I  L   G + +A  L+
Sbjct: 446 DRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELV 505

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M  +  +P   +Y  +I           A AL+   L +G+ P
Sbjct: 506 KKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFP 550



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 137/308 (44%), Gaps = 35/308 (11%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   +F  ++      SV  +N L+  L  L + + A++   E   +G  P+ +TF+  +
Sbjct: 360 EAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFV 419

Query: 128 RCYCNKNDFFEARKVIDCMFDNG-----------------------------------YH 152
           R +C   +   A+++ D M + G                                   + 
Sbjct: 420 RGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFP 479

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++ T+ + ++ L K G LKEA E++ +M   G  P+  TY  ++      G + +A  +
Sbjct: 480 PDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAL 539

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
            + + + G+ P V TYT ++  +   GR   A+    E  E+GV PNV+T+N L NG CK
Sbjct: 540 FLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCK 599

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                +       M+ +   P+K +Y+ L+N     G  + A+ ++K+M+    + D   
Sbjct: 600 VRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCT 659

Query: 333 MNSLLRGL 340
             SLL+ L
Sbjct: 660 HRSLLKHL 667



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 6/230 (2%)

Query: 50  RSLQAQRF------VDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET 103
           R LQ  RF      V  +K     +   + + +   G    +  +N  +  L  L   + 
Sbjct: 441 RGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKE 500

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A +   +    GL P+  T++ +I  +       +AR +   M   G  P+V T+T+L++
Sbjct: 501 ASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIH 560

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           S    GRLK A+    +M   G  PN+ TYN L+ GLC V ++++AY     ++  G+ P
Sbjct: 561 SYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISP 620

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
           + YTYT +++  C +G   EA+ L  + ++R + P+  T  +L     K+
Sbjct: 621 NKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKD 670



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 111/237 (46%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++FD +   G       +   ++  + L +   A     E  + G  P+  T+++ I   
Sbjct: 433 ELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 492

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
               +  EA +++  M  NG  P+  T+T ++++   +G L++A  +  +M   G  P++
Sbjct: 493 HKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSV 552

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  L+      GR++ A      +   G+ P+V TY A+++G CKV + ++A     E
Sbjct: 553 VTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAE 612

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
              +G++PN  T+  L N  C  G   + + L K M  R   PD  ++ +LL  L K
Sbjct: 613 MQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNK 669



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 11/188 (5%)

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE---VD-----ERMMNS--LLRGLCMKS 344
           +ISYS +L+ L + G +R A  + +++V    E   +D     E  M S  L+  L +  
Sbjct: 81  EISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILDLLLWI 140

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL-GKGKKTDEALIHLHHAIEMGHIP 403
           + +K LLE    VF KM  K  + D      V+R L  +    D A    +  +E G  P
Sbjct: 141 YVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICP 200

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             +T+N ++ + C +G + +AL LLF M      P+  +Y++L+  L    +   A  L 
Sbjct: 201 TVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELI 260

Query: 464 GAALKQGV 471
              L+ G+
Sbjct: 261 QDMLRLGL 268



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 54/106 (50%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK  I  F  + + G + +V  +N L+  L  + + + A  FF+E  + G++PN +T++I
Sbjct: 568 LKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTI 627

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           +I   CN   + EA ++   M D    P+  T   L+  L K  +L
Sbjct: 628 LINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKL 673


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 167/316 (52%), Gaps = 11/316 (3%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P   TF+ +I   C + +   A  ++  M  +G   +V T+  L++ LCK+GRL+EA
Sbjct: 147 GCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEA 206

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            ++L++M   GC P++  Y+  + GLC  G+V  A+++L  +++    P+V TY  ++DG
Sbjct: 207 EQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDG 266

Query: 235 FCKVGRSNEAMELLNE-AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
            CK G+ + A+E++ + A   G   NVV ++T+ +G CK G   +   +++ M +  C P
Sbjct: 267 LCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRP 326

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D ++YS+L+NGL K GKI  AV   +EM   G + +     SL+ GLC         L +
Sbjct: 327 DVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR-----LAE 381

Query: 354 AYQVFEKMTKKVSVTDP-----GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
           A ++ E+M+      D       TY  +I  L K  + D+AL         G  P  +++
Sbjct: 382 AERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSY 441

Query: 409 NNVIQALCGEGKIDKA 424
           + +++ L   G+  +A
Sbjct: 442 STIVEGLARSGRALQA 457



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 204/411 (49%), Gaps = 15/411 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG--LAPNSWTFSIMIRC 129
           + +++   G   +V  +N LL  L  L     A +   +  S G    P+  T+S ++  
Sbjct: 32  LLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSG 91

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC      E+R+++  +   G  P+   +T ++ SLCKS RL EALE+L++M R GC P 
Sbjct: 92  YCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPT 151

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + T+N L+ G C    +E A  +L  +   G+K DV TY  +MDG CK GR  EA +LL 
Sbjct: 152 LITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLE 211

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
                G  P+VV +++   G CK G  +    +L+ M+  +  P+ ++Y+T+L+GL K G
Sbjct: 212 RMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSG 271

Query: 310 KIRPAVSIFKEMVRF-GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           KI  A+ + ++M    G  ++    ++++ GLC     +    ++A  V E M +     
Sbjct: 272 KIDTALEMMEQMASSDGCGLNVVGYSTVVDGLC-----KLGRTQEARSVMEAMARAGCRP 326

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  TY  ++  L K  K +EA+  +      G  P  +T+ +++  LC  G++ +A  ++
Sbjct: 327 DVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMV 386

Query: 429 FLM------YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M       +H   PS ++Y+ LI  L +  +  DA   +     QG  P
Sbjct: 387 EEMSSGGGGGDHCP-PSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDP 436



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 180/353 (50%), Gaps = 15/353 (4%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PNS TF+ ++  +  +    +  ++++ M   G  PNV ++  L+  LCK  R  EA
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 175 LE-VLDQMGRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
            E V D + R G   P++ TY+ LL G C  G+VEE+ E+L  V + GL+PD   YT VM
Sbjct: 65  EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM 124

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
              CK  R  EA+ELL E I  G  P ++TFNTL +G C+E        LL+ M      
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVK 184

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            D ++Y+TL++GL K G+++ A  + + M   G   D    +S + GLC KS +    + 
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC-KSGK----VL 239

Query: 353 DAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHH-AIEMGHIPRTITFN 409
           +A+QV E+M  + S  DP   TY  ++  L K  K D AL  +   A   G     + ++
Sbjct: 240 NAHQVLEQM--RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDA 459
            V+  LC  G+  +A  ++  M      P   +Y  L+    K  ++E++ +A
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEA 350



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 164/331 (49%), Gaps = 8/331 (2%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G  PN  TF  LVN   K GR  +   +L+ M   G +PN+ +YN LL+GLC + R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 206 VEEAYEMLMNVKNDGLK--PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
             EA E++ ++ + G +  PD+ TY+ ++ G+CK G+  E+ ELL E I RG+ P+ + +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             +    CK     + + LL+ M +  C P  I+++TL++G  +   +  A S+ + M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G + D    N+L+ GLC     +   L++A Q+ E+M       D   Y   +  L K 
Sbjct: 181 SGVKADVVTYNTLMDGLC-----KAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP-SRTS 442
            K   A   L    +  H P  +T+N ++  LC  GKID AL ++  M        +   
Sbjct: 236 GKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVG 295

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           Y  ++  L +L ++ +A ++  A  + G  P
Sbjct: 296 YSTVVDGLCKLGRTQEARSVMEAMARAGCRP 326



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 6/213 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCY 130
           + + ++    + +V  +N +L  L    + +TA++   + ASS G   N   +S ++   
Sbjct: 244 VLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGL 303

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      EAR V++ M   G  P+V T++ LVN LCK+G+++EA+E + +M   GCKPN 
Sbjct: 304 CKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNA 363

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKN-----DGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            TY  L+ GLC  GR+ EA  M+  + +     D   P V TY A++ G CK GR ++A+
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDAL 423

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +       +G  P+ V+++T+  G  + G  ++
Sbjct: 424 KFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQ 456


>gi|125575133|gb|EAZ16417.1| hypothetical protein OsJ_31886 [Oryza sativa Japonica Group]
          Length = 678

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 187/362 (51%), Gaps = 5/362 (1%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N L+  L    +  +A++   +    G +P+  TF+ +IRC  N+  +  A         
Sbjct: 290 NMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWKEQLR 349

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G+ P   T T+LV+ +CK+   ++ALEVLD++   GC+P++ TYN L+   C  GR+ +
Sbjct: 350 LGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLND 409

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +L  +  +GL+P+  TY  ++   C + R +E  +LL +  +    P+V T+N   N
Sbjct: 410 AKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFIN 469

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
            +CK G   + + +L+ M   NC PD ++ +TLLN + K G +  A+ I + +   G+++
Sbjct: 470 YFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKL 529

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                N+L+  L  K+  +K     A  +F++M       D  TYG ++    K    DE
Sbjct: 530 VLITYNTLIDALAKKAEVKK-----AMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADE 584

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           AL  L+  + +G   +T TF  VIQALC +GK++ A  +  +M     IP  +    ++T
Sbjct: 585 ALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVT 644

Query: 449 KL 450
           K+
Sbjct: 645 KV 646



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 153/349 (43%), Gaps = 9/349 (2%)

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +R YCN     +A  VID M  +G  P       ++  L K+G+  +A  VL+ M   G 
Sbjct: 223 LRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGG 282

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P+  + N L+  LC  G++  A ++L +++  G  P   T+  ++         + A+ 
Sbjct: 283 VPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAIS 342

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
              E +  G  P  +T   L +  CK   P K + +L  +    C PD ++Y+ L++   
Sbjct: 343 FWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASC 402

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEK-DLLEDAYQVFEKMTKK 364
           K G++  A  I   +   G E +      LL  LC M+ W+E  DLLED  QV       
Sbjct: 403 KAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRD---- 458

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY I I    K    D+A+  L   +     P  +T N ++ A+  +G +++A
Sbjct: 459 ---PDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEA 515

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L +   + E+       +Y+ LI  L +  +   A  L+   L  G+ P
Sbjct: 516 LGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISP 564



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 154/351 (43%), Gaps = 48/351 (13%)

Query: 8   NSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPL 66
           N+ I    N+R +++   F K            E L L   P  + +   VD + K    
Sbjct: 325 NTLIRCMFNQRMYDRAISFWK------------EQLRLGWPPYEMTSTLLVDLVCKNCGP 372

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           ++ +++ D +  +G    V  +N L+ A         A    +  ++ GL PN  T+ I+
Sbjct: 373 QKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCIL 432

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +   CN   + E   +++ M      P+VTT+ I +N  CK G L +A++VL++M    C
Sbjct: 433 LHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNC 492

Query: 187 KPNIQTYNCLLKGLCYVGRVEEA-----------YEMLMNVKN----------------- 218
            P+I T N LL  +   G VEEA           Y++++   N                 
Sbjct: 493 SPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMV 552

Query: 219 -------DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
                  DG+ PD  TY +++ GFCK   ++EA++LLN+ +  G      TF  +    C
Sbjct: 553 LFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALC 612

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           ++G       + K+M  +N +P     S+++  + K G  + A  + +++V
Sbjct: 613 RDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWNKEAQMLHQKLV 663



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 84/192 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L + ID+ + +  +  +  +   N LL A+      E A+         G      
Sbjct: 473 KYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLI 532

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I     K +  +A  + D M  +G  P+  T+  LV   CK     EAL++L+QM
Sbjct: 533 TYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQM 592

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G +    T+  +++ LC  G+VE A E+   + +    P     ++++    K G +
Sbjct: 593 LTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWN 652

Query: 242 NEAMELLNEAIE 253
            EA  L  + +E
Sbjct: 653 KEAQMLHQKLVE 664


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 204/441 (46%), Gaps = 31/441 (7%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A    E   + +  +  G+  SV  +N +L  L  + + + A++ F E      APN  T
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKK-DAAPNLST 379

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I   C       A ++ D M   G  PNV T  I+V+ LCKS +L EA  + +QM 
Sbjct: 380 YNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMD 439

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              C P+  T+  L+ GL  VGRV++AY++   + +   + +   YT+++  F   GR  
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +  ++  + + +  +P++   NT  +   K G P KG  + + +K R  +PD  SYS L+
Sbjct: 500 DGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILI 559

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC----------------MKSWE 346
           +GL+K G       +F  M   G  +D R  N ++ G C                 K +E
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619

Query: 347 EK--------------DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
                           D L++AY +FE+   K    +   Y  +I   GK  + DEA + 
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L   ++ G  P   T+N+++ AL    +I++AL+    M E    P++ +Y +LI  L +
Sbjct: 680 LEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739

Query: 453 LEKSYDACALYGAALKQGVIP 473
           + K   A   +    KQG+ P
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKP 760



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 192/415 (46%), Gaps = 6/415 (1%)

Query: 58  VDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           VDR+ K+  L E   IF+ +           F  L+  L  +   + A K + +      
Sbjct: 419 VDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDC 478

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
             NS  ++ +I+ + N     +  K+   M +    P++      ++ + K+G  ++   
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           + +++      P+ ++Y+ L+ GL   G   E YE+  ++K  G   D   Y  V+DGFC
Sbjct: 539 MFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G+ N+A +LL E   +G  P VVT+ ++ +G  K     +   L +  K +    + +
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
            YS+L++G  K G+I  A  I +E+++ G   +    NSLL  L +K+ E    + +A  
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDAL-VKAEE----INEALV 713

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
            F+ M +     +  TYGI+I  L K +K ++A +      + G  P TI++  +I  L 
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
             G I +A  L      +  +P    Y+ +I  L    ++ DA +L+    ++G+
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 197/447 (44%), Gaps = 41/447 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F+ +KKD    ++S +N L+  L    + + A +        GL PN  
Sbjct: 355 KMGKVDEALRVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVR 413

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T +IM+   C      EA  + + M      P+  TF  L++ L K GR+ +A ++ ++M
Sbjct: 414 TVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKM 473

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYE------------------------------ 211
               C+ N   Y  L+K     GR E+ ++                              
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEP 533

Query: 212 -----MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                M   +K+    PD  +Y+ ++ G  K G +NE  EL     E+G   +   +N +
Sbjct: 534 EKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G+CK G   K   LL+ MK +   P  ++Y ++++GL K  ++  A  +F+E      
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           E++  + +SL+ G     + +   +++AY + E++ +K    +  T+  ++  L K ++ 
Sbjct: 654 ELNVVIYSSLIDG-----FGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEI 708

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           +EAL+      E+   P  +T+  +I  LC   K +KA +    M +    PS  SY  +
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I+ L +     +A AL+      G +P
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVP 795



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 187/447 (41%), Gaps = 24/447 (5%)

Query: 45  LKENPRSLQAQRFVDRIKASP-----------LKERIDIFDSIKKDGTNWSVSDFN---- 89
           LK+  R+++  R+ +R    P           +  R   FD++ +     SV+ F     
Sbjct: 75  LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVN 134

Query: 90  ---DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
              +++++ V  N+             +   P    ++ +I  +   N       +   M
Sbjct: 135 TCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM 194

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            + GY P V  FT L+    K GR+  AL +LD+M       +I  YN  +     VG+V
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           + A++    ++ +GLKPD  TYT+++   CK  R +EA+E+     +    P    +NT+
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             GY   G   +   LL+  + +  +P  I+Y+ +L  L K GK+  A+ +F+EM +   
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA- 373

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             +    N L+  LC         L+ A+++ + M K     +  T  I++  L K +K 
Sbjct: 374 APNLSTYNILIDMLC-----RAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           DEA             P  ITF ++I  L   G++D A  +   M +     +   Y  L
Sbjct: 429 DEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSL 488

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I       +  D   +Y   + Q   P
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMVNQNCSP 515



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 152/329 (46%), Gaps = 6/329 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
             P K R  +F+ IK          ++ L+  L+         + F      G   ++  
Sbjct: 531 GEPEKGRA-MFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I  +C      +A ++++ M   G+ P V T+  +++ L K  RL EA  + ++  
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
               + N+  Y+ L+ G   VGR++EAY +L  +   GL P+VYT+ +++D   K    N
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEIN 709

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA+       E   TPN VT+  L NG CK     K     + M+K+   P  ISY+T++
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +GL K G I  A ++F      G   D    N+++ GL        +   DA+ +FE+  
Sbjct: 770 SGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL-----SNGNRAMDAFSLFEETR 824

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
           ++       T  +++ TL K    ++A I
Sbjct: 825 RRGLHIHNKTCVVLLDTLHKNDCLEQAAI 853


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 194/410 (47%), Gaps = 5/410 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   + D +   G    +  +N L+  L      E A +   E    GL PN+ TF+ 
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           M+   C K D +EA +V + M   G  P++ +F+ +V    ++G L  AL   ++M  +G
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+   Y  L+ G C    V  A +M   +   G   DV TY  +++G C+    ++A 
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           EL  E +ERGV P+  T  TL +GYCK+G   K + L + M  R+  PD ++Y+TL++G 
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGF 514

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G++  A  ++ +M+           + L+ G C        L+ +A++++++M +K 
Sbjct: 515 CKVGEMEKAKELWYDMISREIFPSYISFSILINGFC-----SLGLVSEAFRLWDEMKEKG 569

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
                 T   +I+   +     +A   L+  I  G  P  IT+N +I +   E   D+A 
Sbjct: 570 IKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAF 629

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            L+  M E   +P+  +Y+ ++    +  +  +A  +    + +G+ P +
Sbjct: 630 FLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDK 679



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 197/413 (47%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++A  L+E  + F  ++K G   S++  N LL A+V +   + A K + +    G   N 
Sbjct: 165 VQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNV 224

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T +IM+   C           +  M + G + ++ T+  LVN+ C+ G + EA  ++D 
Sbjct: 225 YTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDC 284

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G KP + TYN L+ GLC  G  E A  +L  +   GL P+  T+  ++   C+   
Sbjct: 285 MAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKED 344

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA  + NE ++RGV P++++F+++   + + G   + +   + MK    +PD + Y+ 
Sbjct: 345 VWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTI 404

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NG  +   +  A+ +  EMV  G  +D    N+LL GLC        +L+DA ++F++
Sbjct: 405 LINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLC-----RGKMLDDADELFKE 459

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++    D  T   +I    K     +AL            P  +T+N ++   C  G+
Sbjct: 460 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 519

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++KA  L + M      PS  S+ +LI     L    +A  L+    ++G+ P
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKP 572



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 192/429 (44%), Gaps = 46/429 (10%)

Query: 48  NPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           NP  +++ R  D  +A    ER+  F+ + + G    +  F+ ++       E   A+ +
Sbjct: 333 NPMLVESCRKEDVWEA----ERV--FNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAY 386

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F +    GL P++  ++I+I  YC  +D   A K+ + M + G   +V T+  L+N LC+
Sbjct: 387 FEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCR 446

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              L +A E+  +M   G  P+  T   L+ G C  G + +A  +   +    LKPDV T
Sbjct: 447 GKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVT 506

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  +MDGFCKVG   +A EL  + I R + P+ ++F+ L NG+C  G   +   L   MK
Sbjct: 507 YNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMK 566

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           ++   P  ++ +T++ G L+ G +  A      M+  G   D           C+     
Sbjct: 567 EKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPD-----------CI----- 610

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
                                   TY  +I +  K +  D A   +++  E G +P  +T
Sbjct: 611 ------------------------TYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVT 646

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N ++      G++ +A ++L  M +    P +++Y  LI      +   +A  ++   L
Sbjct: 647 YNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEML 706

Query: 468 KQGVIPQRK 476
           ++G +P  K
Sbjct: 707 QRGFVPDDK 715



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 149/321 (46%), Gaps = 9/321 (2%)

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
           V  F +L+ +  ++ +L+E  E    + + G   +I   N LL  +  VG V+ A+++  
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
           +    G   +VYT   +++  CK G+ +     L+E  E+GV  ++VT+NTL N YC+ G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              +  GL+  M  +   P   +Y+ L+NGL K G    A  +  EM+  G   +    N
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 335 SLLRGLCMKS--WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            +L   C K   WE       A +VF +M ++  V D  ++  ++    +  +   AL +
Sbjct: 334 PMLVESCRKEDVWE-------AERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAY 386

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
                 +G +P T+ +  +I   C    +  AL +   M E   +    +Y+ L+  L +
Sbjct: 387 FEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCR 446

Query: 453 LEKSYDACALYGAALKQGVIP 473
            +   DA  L+   +++GV P
Sbjct: 447 GKMLDDADELFKEMVERGVFP 467



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 164/373 (43%), Gaps = 43/373 (11%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F ++IR Y       E  +    +   G+  ++     L+ ++ K G +  A +V +  
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G   N+ T N ++  LC  G+++     L  ++  G+  D+ TY  +++ +C+ G  
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT---------PMKGVGL---------- 282
           +EA  L++    +G+ P + T+N L NG CKEG+          M GVGL          
Sbjct: 276 SEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPM 335

Query: 283 ----------------LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
                              M +R  +PD IS+S+++    + G++  A++ F++M   G 
Sbjct: 336 LVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGL 395

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             D  +   L+ G C       D +  A ++  +M ++  V D  TY  ++  L +GK  
Sbjct: 396 VPDTVIYTILINGYC-----RNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKML 450

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D+A       +E G  P   T   +I   C +G + KAL L   M   +  P   +Y+ L
Sbjct: 451 DDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTL 510

Query: 447 I---TKLDQLEKS 456
           +    K+ ++EK+
Sbjct: 511 MDGFCKVGEMEKA 523


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 206/403 (51%), Gaps = 6/403 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +++  L   I  F+ +   G     + FN+LL  +V  +      +FF+E S   +  + 
Sbjct: 105 VQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-SKIKVDLDV 163

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           ++F I+I+  C   +  ++  ++  + + G+ PNV  +T L++  CK G +++A ++  +
Sbjct: 164 YSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFE 223

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           MG+ G   N  TY  L+ GL   G  ++ +EM   ++ DG+ P++YTY  VM+  CK GR
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGR 283

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           + +A +L +E  ERGV+ N+VT+NTL  G C+E    +   ++  MK     P+ I+Y+T
Sbjct: 284 TKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNT 343

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G    GK+  A+S+ +++   G        N L+ G C     +K     A +V ++
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC-----KKGDTSGAGKVVKE 398

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++       TY I+I T  +    ++A+       E+G  P   T++ +I   C +G+
Sbjct: 399 MEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQ 458

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +++A  L  LM      P++  Y+ ++    +   SY A  L+
Sbjct: 459 MNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLF 501



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 178/353 (50%), Gaps = 5/353 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++  D+F  + K G   +   +  L+  L     ++   + + +    G+ PN +
Sbjct: 210 KRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLY 269

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  +C      +A K+ D M + G   N+ T+  L+  LC+  +  EA +V+DQM
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN+ TYN L+ G C VG++ +A  +  ++K+ GL P + TY  ++ GFCK G +
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A +++ E  ERG+ P+ +T+  L + + +     K + L   M++    PD  +YS L
Sbjct: 390 SGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVL 449

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G    G++  A  +FK MV    E ++ + N+++ G C +    +     A ++F +M
Sbjct: 450 IHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYR-----ALRLFREM 504

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            +K    +  +Y  +I  L K +K+ EA   +   I+ G  P     N + +A
Sbjct: 505 EEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRA 557



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 23/281 (8%)

Query: 210 YEMLMN--VKNDGLKPDVYTYTAVMD-GFCK------------VGRS--NEAMELLNEAI 252
           YE+++N  V++  L   +  +  ++D GF              VG S  N+     NE+ 
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
            + V  +V +F  +  G C+ G   K   LL  +++    P+ + Y+TL++G  K G+I 
Sbjct: 157 IK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A  +F EM +FG   +E     L+ GL      +  + +  ++++EKM +     +  T
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLF-----KNGIKKQGFEMYEKMQEDGVFPNLYT 270

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y  V+    K  +T +A        E G     +T+N +I  LC E K ++A  ++  M 
Sbjct: 271 YNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                P+  +Y+ LI     + K   A +L      +G+ P
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 193/412 (46%), Gaps = 16/412 (3%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           ++L   RFVDR         I++F  + +         +  L+  L      + AV    
Sbjct: 195 KALCKLRFVDRA--------IEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLD 246

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           E  S G +P+   ++++I   C K D     K++D MF  G  PN  T+  L++ LC  G
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 306

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +L +A+ +L++M    C PN  TY  L+ GL    R  +A  +L +++  G   + + Y+
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++ G  K G++ EAM L  +  E+G  PN+V ++ L +G C+EG P +   +L  M   
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
            CLP+  +YS+L+ G  K G    AV ++KEM + G   ++   + L+ GLC        
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR---- 482

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI---EMGHIPRTI 406
            +++A  V+ KM       D   Y  +I+ L      D AL   H  +   E    P  +
Sbjct: 483 -VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
           T+N ++  LC +  I +A+ LL  M +    P   + +  +  L +   S D
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCD 593



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 201/411 (48%), Gaps = 12/411 (2%)

Query: 70  IDIFDSIKKDGTNWSVS----DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++ +D +     N ++S     FN ++ AL  L   + A++ F         P+ +T+  
Sbjct: 168 LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCT 227

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C +    EA  ++D M   G  P+   + +L++ LCK G L    +++D M   G
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN  TYN L+ GLC  G++++A  +L  + +    P+  TY  +++G  K  R+ +A+
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL+   ERG   N   ++ L +G  KEG   + + L + M ++ C P+ + YS L++GL
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + GK   A  I   M+  G   +    +SL++G     + +  L E+A QV+++M K  
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKG-----FFKTGLCEEAVQVWKEMDKTG 462

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +   Y ++I  L    +  EA++     + +G  P T+ ++++I+ LCG G +D AL
Sbjct: 463 CSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAAL 522

Query: 426 LLLFLMY---EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L   M    E    P   +Y++L+  L   +    A  L  + L +G  P
Sbjct: 523 KLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDP 573



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 172/389 (44%), Gaps = 46/389 (11%)

Query: 100 EQETAVKFFSEASSYG-LAPNSWTFSIMIRCYCNKNDF-----------FEARKVIDCMF 147
           E   + K F  A   G       T S MI  Y N  DF            E R +I+  F
Sbjct: 56  EAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSF 115

Query: 148 -------DNGYHPN------------------VTTFTILVNSLCKSGRLKEALE----VL 178
                     + P+                  V +F  ++N +   G     LE    V+
Sbjct: 116 IVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVV 175

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           +    +   PN  ++N ++K LC +  V+ A E+   +      PD YTY  +MDG CK 
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
            R +EA+ LL+E    G +P+ V +N L +G CK+G   +   L+  M  + C+P++++Y
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           +TL++GL   GK+  AVS+ + MV      ++    +L+ GL      ++    DA ++ 
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV-----KQRRATDAVRLL 350

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
             M ++    +   Y ++I  L K  K +EA+       E G  P  + ++ ++  LC E
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           GK ++A  +L  M     +P+  +Y  L+
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLM 439


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 191/411 (46%), Gaps = 5/411 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  +    +K +G   +V  ++  + A       + A+KFF +     L PN +
Sbjct: 337 KFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEF 396

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C   +  EA K+++ +   G   NV T+T L++ LC+ GR+KEA EV   M
Sbjct: 397 TYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAM 456

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN +TY  L+ G      +E A ++L  +K   +KPD+  Y  ++ G C   R 
Sbjct: 457 LNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRL 516

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L+ E  E G+  N V + TL + Y K G   + + LL+ M     +  +++Y  L
Sbjct: 517 EEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCAL 576

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K G ++ A+  F  M   G + +  +  +L+ GLC     + +  E A ++F++M
Sbjct: 577 IDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLC-----KNNCFEVAKKLFDEM 631

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K  + D   Y  +I    K     EAL      IE+G       +  +I  L   G++
Sbjct: 632 LDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQV 691

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            KA  LL  M     +P    Y  LI K   L K  +A  L     K+G+I
Sbjct: 692 QKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 193/385 (50%), Gaps = 5/385 (1%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N LL  L  +   + + KFF +  + G+  + +T++IMI   C + D   AR +   M +
Sbjct: 224 NALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKE 283

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G+ P++ T+  L++   K G L E + + +QM    C P++ TYN L+   C   R+ +
Sbjct: 284 AGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPK 343

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A+E L  +K +GLKP+V TY+  +D FCK G   EA++   +     +TPN  T+ +L +
Sbjct: 344 AFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLID 403

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
             CK G   + + L++ + +     + ++Y+ LL+GL + G+++ A  +F+ M+  G   
Sbjct: 404 ANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP 463

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           ++    +L+ G  +K+ E    +E A  + ++M +K    D   YG ++  L    + +E
Sbjct: 464 NQETYTALVHGF-IKAKE----MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEE 518

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A + +    E G     + +  ++ A    G+  +AL LL  M +   I +  +Y  LI 
Sbjct: 519 AKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALID 578

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L +     +A   +G   + G+ P
Sbjct: 579 GLCKSGLVQEAMHHFGRMSEIGLQP 603



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 194/403 (48%), Gaps = 5/403 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           F  +   G   SV  +N ++  L    + E A   F++    G  P+  T++ +I  +  
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
                E   + + M D    P+V T+  L+N  CK  R+ +A E L +M   G KPN+ T
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y+  +   C  G ++EA +  ++++   L P+ +TYT+++D  CK G   EA++L+ E +
Sbjct: 363 YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEIL 422

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           + G+  NVVT+  L +G C+EG   +   + + M      P++ +Y+ L++G +K  ++ 
Sbjct: 423 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 482

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A  I KEM     + D  +  ++L GLC +S      LE+A  +  ++ +    T+   
Sbjct: 483 YAKDILKEMKEKCIKPDLLLYGTILWGLCNES-----RLEEAKLLIGEIKESGINTNAVI 537

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y  ++    K  +  EAL  L   +++G I   +T+  +I  LC  G + +A+     M 
Sbjct: 538 YTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMS 597

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           E    P+   Y  L+  L +      A  L+   L +G++P +
Sbjct: 598 EIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDK 640



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 141/295 (47%), Gaps = 5/295 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P    F  L ++L + G L+EA E   +M +    P  ++ N LL  L  VGR + + + 
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
             ++   G+K  V+TY  ++D  CK G    A  L  +  E G TP++VT+N+L +G+ K
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   + + + + MK  +C PD I+Y+ L+N   K+ ++  A     EM   G + +   
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            ++ +   C     ++ +L++A + F  M +     +  TY  +I    K     EAL  
Sbjct: 363 YSTFIDAFC-----KEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKL 417

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +   ++ G     +T+  ++  LC EG++ +A  +   M      P++ +Y  L+
Sbjct: 418 VEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALV 472



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 122/265 (46%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IKA  ++   DI   +K+      +  +  +L  L   +  E A     E    G+  N+
Sbjct: 476 IKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNA 535

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             ++ ++  Y       EA  +++ M D G      T+  L++ LCKSG ++EA+    +
Sbjct: 536 VIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGR 595

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M  IG +PN+  Y  L+ GLC     E A ++   + + G+ PD   YTA++DG  K G 
Sbjct: 596 MSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 655

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA+ L +  IE G+  ++  +  L  G    G   K   LL  M  +  LPD++ Y  
Sbjct: 656 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 715

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFG 325
           L+      GK+  A+ +  EM + G
Sbjct: 716 LIKKYYALGKVDEALELQNEMAKRG 740



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 127/291 (43%), Gaps = 5/291 (1%)

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P    ++ L   L  +G +EEA E  + ++   + P   +  A++    KVGR + + 
Sbjct: 181 CVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSR 240

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +   +    G+  +V T+N + +  CKEG       L   MK+    PD ++Y++L++G 
Sbjct: 241 KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +   + IF++M     + D    N+L+   C     + + +  A++   +M    
Sbjct: 301 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFC-----KFERMPKAFEFLHEMKANG 355

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY   I    K     EA+        +   P   T+ ++I A C  G + +AL
Sbjct: 356 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEAL 415

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            L+  + +     +  +Y  L+  L +  +  +A  ++ A L  GV P ++
Sbjct: 416 KLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQE 466


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 189/377 (50%), Gaps = 5/377 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+++ IK  G   +      L+  L   +  + AV F  E       P+  +F+ ++  +
Sbjct: 221 DVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGF 280

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C       A+     M   G  P+V ++ IL++ LC +G ++EALE  + M   G +P+I
Sbjct: 281 CKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDI 340

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L  G   +G +  A++++  +  +GL PD+ TYT ++ G C++G   E+ +L  +
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEK 400

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + +G+  ++VT+  L +  CK G   + V LL  M+     PD ++YS L++GL K G 
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGA 460

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A+ +++EM       +  + ++++ GL      EK  + +A   F+ +TK     + 
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLF-----EKGAISEAQMYFDSVTKSDVAEEI 515

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             Y I+I    K     EA+      IE G  P  +TFN++I   C +GK+ +A+ LL  
Sbjct: 516 ILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 575

Query: 431 MYEHAKIPSRTSYDMLI 447
           +  H  +P+  +Y  L+
Sbjct: 576 IKVHGLVPTSVTYTTLM 592



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 192/388 (49%), Gaps = 5/388 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  ++E ++  + ++  G    +  +N L     +L     A K        GL P+  T
Sbjct: 318 AGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVT 377

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I  +C   +  E+ K+ + M   G   ++ T+T+L++SLCKSGR+ EA+ +L +M 
Sbjct: 378 YTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEME 437

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
            IG KP++ TY+ L+ GLC  G VEEA E+   + +  + P+ +  +A++ G  + G  +
Sbjct: 438 VIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAIS 497

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA    +   +  V   ++ +N + +GY K G   + V   K + ++   P  +++++L+
Sbjct: 498 EAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLI 557

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
            G  K GK+  AV +   +   G         +L+ G C    EE D +   + +  +M 
Sbjct: 558 YGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYC----EEGD-MHSMFDMLHEME 612

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            K       TY +V++ L K  +  E++  L +    G  P  IT+N VIQ+ C    + 
Sbjct: 613 AKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQ 672

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKL 450
           KA  L   M +H+  PS  +Y++LI  L
Sbjct: 673 KAFQLHNQMLQHSLQPSPVTYNVLINGL 700



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 190/414 (45%), Gaps = 13/414 (3%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   + + +   G   S+  +  LL +L      + AV    E    GL P+  T+S+
Sbjct: 391 IEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSV 450

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C +    EA ++ + M     +PN    + +++ L + G + EA    D + +  
Sbjct: 451 LIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSD 510

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
               I  YN ++ G   +G + EA      +   G+ P + T+ +++ GFCK G+  EA+
Sbjct: 511 VAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAV 570

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +LL+     G+ P  VT+ TL NGYC+EG       +L  M+ +   P +I+Y+ ++ GL
Sbjct: 571 KLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGL 630

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G++  +V + K M   G   D+   N++++  C     +   L+ A+Q+  +M +  
Sbjct: 631 CKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFC-----KAHDLQKAFQLHNQMLQHS 685

Query: 366 SVTDPGTYGIVIRTL---GKGKKTDEALIHLH-HAIEMGHIPRTITFNNVIQALCGEGKI 421
               P TY ++I  L   G  K  D  L+ L   +I +      + +  +I+A C +G +
Sbjct: 686 LQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRL----TKVAYTTIIKAHCAKGDV 741

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
             AL+    M E     S   Y  +I +L +     DA   +   L  G+ P +
Sbjct: 742 QNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQ 795



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 186/415 (44%), Gaps = 11/415 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  + E + +   ++  G    +  ++ L+  L      E A++ + E  S  + PNS+
Sbjct: 422 KSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSF 481

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
             S +I     K    EA+   D +  +     +  + I+++   K G + EA+    Q+
Sbjct: 482 VCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQI 541

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P I T+N L+ G C  G++ EA ++L  +K  GL P   TYT +M+G+C+ G  
Sbjct: 542 IEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDM 601

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +   ++L+E   + + P  +T+  +  G CKEG   + V LLK M  R   PD+I+Y+T+
Sbjct: 602 HSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTV 661

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +    K   ++ A  +  +M++   +      N L+ GLC+        L+DA ++   +
Sbjct: 662 IQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGN-----LKDADRLLVTL 716

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +        Y  +I+          AL+  H  +E G       ++ VI  LC    I
Sbjct: 717 QDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLI 776

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA---LYGAALKQGVIP 473
             A     +M  H   P +   D+ +  L+   +S D  +   ++   +K G++P
Sbjct: 777 TDAKFFFCMMLTHGIPPDQ---DICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 170/387 (43%), Gaps = 51/387 (13%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           + +L++L + N       F    + YG   +  ++ I+      K    E R+V++ M +
Sbjct: 84  DQILLSLRVDNSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVE 143

Query: 149 ---NGYHP---------------NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
              +G  P               N   + +L  +  ++  + +AL VL +M  +  + +I
Sbjct: 144 EEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSI 203

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN LL  L +   + + Y     +K  G+  + YT   ++DG C+  R  +A+  L E
Sbjct: 204 ATYNSLLYNLRHTDIMWDVYN---EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRE 260

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
                  P+VV+FN L +G+CK G+         +M K   LPD  SY+ LL+GL   G 
Sbjct: 261 TGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGS 320

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSL-----LRGLCMKSWE----------EKDL----- 350
           +  A+    +M   G E D    N L     + GL   +W+            DL     
Sbjct: 321 MEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTI 380

Query: 351 ----------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
                     +E+++++ EKM  +       TY +++ +L K  + DEA+I LH    +G
Sbjct: 381 LICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIG 440

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLL 427
             P  +T++ +I  LC  G +++A+ L
Sbjct: 441 LKPDLLTYSVLIHGLCKRGAVEEAIEL 467


>gi|357140650|ref|XP_003571877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Brachypodium distachyon]
          Length = 753

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 177/343 (51%), Gaps = 5/343 (1%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N L+  L    +  +A+    +    G +PN  TF+ +IRC CN++ + +A         
Sbjct: 365 NMLIAQLCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITFWKEQLR 424

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G+ P V T T+LV+ +CK    K A+EVLD++   GC+P++ TYN L+   C   R+++
Sbjct: 425 IGWPPYVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASCKADRLKD 484

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +L  +  +GL+P+  TY  ++   C   R  E  +LL         P+V  +N   N
Sbjct: 485 AKTILTRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFIN 544

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
            +CK G   + + +L+ M    C PD ++Y+TLLN + K G +  A+ I   + + G+++
Sbjct: 545 YFCKYGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFIRQNGWQL 604

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                N+L+  L  K   +K ++     +F++M       D  TYG ++    K   ++E
Sbjct: 605 VLITYNTLIDALANKGEVKKAMV-----LFDEMASGRISPDDITYGSLVMGFCKKNMSEE 659

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           AL  L+  + +G   +T TF  VIQALC +GK++ A  +L +M
Sbjct: 660 ALELLNRTLALGFQVKTTTFIMVIQALCRDGKVEAAAEILRVM 702



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 153/357 (42%), Gaps = 5/357 (1%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           +G  P+S     +IR         +AR+V++ M  +G  P+  T  +L+  LC+ G+L  
Sbjct: 320 HGQIPDSKCCIRLIRGLVKTGKANKARQVLEVMVLSGGIPDTITCNMLIAQLCRGGQLSS 379

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A+ VL+ M   G  PN  T+N L++ +C     ++A          G  P V T T ++D
Sbjct: 380 AMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITFWKEQLRIGWPPYVMTNTLLVD 439

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             CK   S  AME+L+E    G  P+VVT+N L +  CK         +L  +      P
Sbjct: 440 LICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASCKADRLKDAKTILTRLIAEGLEP 499

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           +  +Y  LL+ L    +      +   M R   E D    N  +   C     +   L+ 
Sbjct: 500 NSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFINYFC-----KYGHLDQ 554

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A  V EKM       D  TY  ++  + K    +EAL+  H   + G     IT+N +I 
Sbjct: 555 AIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFIRQNGWQLVLITYNTLID 614

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           AL  +G++ KA++L   M      P   +Y  L+    +   S +A  L    L  G
Sbjct: 615 ALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMGFCKKNMSEEALELLNRTLALG 671



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 137/318 (43%), Gaps = 36/318 (11%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E L +   P  +     VD I K    K  +++ D +  +G    V  +N L+ A    +
Sbjct: 421 EQLRIGWPPYVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASCKAD 480

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
             + A    +   + GL PNS T+ I++   CNK  + E   ++  M      P+VT + 
Sbjct: 481 RLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYN 540

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           I +N  CK G L +A++VL++M    C P+I TYN LL  +   G VEEA  +   ++ +
Sbjct: 541 IFINYFCKYGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFIRQN 600

Query: 220 G-----------------------------------LKPDVYTYTAVMDGFCKVGRSNEA 244
           G                                   + PD  TY +++ GFCK   S EA
Sbjct: 601 GWQLVLITYNTLIDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMGFCKKNMSEEA 660

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           +ELLN  +  G      TF  +    C++G       +L++M       +   Y +++  
Sbjct: 661 LELLNRTLALGFQVKTTTFIMVIQALCRDGKVEAAAEILRVMVSETNNTNSSFYLSIVRR 720

Query: 305 LLKWGKIRPAVSIFKEMV 322
           + K G+I  A  + +E++
Sbjct: 721 VAKSGRIEEAERLHQELI 738



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 16/196 (8%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALV---MLNEQETAVKFFSEASSYGLAPNSW- 121
           L + ID+ + +  D     +  +N LL A+    M+ E      F  +        N W 
Sbjct: 552 LDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFIRQ--------NGWQ 603

Query: 122 ----TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
               T++ +I    NK +  +A  + D M      P+  T+  LV   CK    +EALE+
Sbjct: 604 LVLITYNTLIDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMGFCKKNMSEEALEL 663

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L++   +G +    T+  +++ LC  G+VE A E+L  + ++    +   Y +++    K
Sbjct: 664 LNRTLALGFQVKTTTFIMVIQALCRDGKVEAAAEILRVMVSETNNTNSSFYLSIVRRVAK 723

Query: 238 VGRSNEAMELLNEAIE 253
            GR  EA  L  E I+
Sbjct: 724 SGRIEEAERLHQELID 739


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 199/397 (50%), Gaps = 10/397 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + +F+ + +        +FN +L +LV      T +    +    G+ PN +  +I
Sbjct: 67  VDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNI 126

Query: 126 MIRCYCNKN----DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +I C+C          +A    D +   G+H +  ++  L++ LCK G  + AL++L ++
Sbjct: 127 LIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRV 186

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                + N   YN ++ G+C    V +A+++   + + G+ P+V TY+A++ GF  VG+ 
Sbjct: 187 DGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKL 246

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A++L N+ I   + P+  TFN L +G+CK+    +G  +  +M K+  +PD ++Y++L
Sbjct: 247 KDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSL 306

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G     ++  A SIF  M + G   D R  N L+ G C     +K     A  +F +M
Sbjct: 307 MDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDK-----AMNLFNEM 361

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K  + +  TY  +I  L K  +   AL  +    + G  P  +T+N++I AL    ++
Sbjct: 362 HCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQV 421

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
           DKA+ L+    +    PS  +Y +LI  L ++E  YD
Sbjct: 422 DKAIALITKFKDQGIQPSMYTYTILIDGLCKVE-GYD 457



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 175/367 (47%), Gaps = 26/367 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  D++  +   G + +V  ++ L+    ++ + + A+  F++     + P+ +
Sbjct: 207 KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGY 266

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I++  +C      E + V   M   G  P+V T+  L++  C    +  A  + + M
Sbjct: 267 TFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTM 326

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P+I++YN L+ G C + +V++A  +   +    + P+V TY +++DG  K GR 
Sbjct: 327 AQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRI 386

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A++L+++  +RGV PN++T+N++ +   K     K + L+   K +   P   +Y+ L
Sbjct: 387 SYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTIL 446

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K                 G+++     N ++ G C     +K L ++A  +  KM
Sbjct: 447 IDGLCKVE---------------GYDITVNTYNVMIHGFC-----KKGLFDEALSLLSKM 486

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                + +  TY I IR+L    + D+A       I  G + R+ ++       C   KI
Sbjct: 487 KDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASYP------CSSMKI 540

Query: 422 DKALLLL 428
            ++L ++
Sbjct: 541 HQSLTMV 547



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 172/391 (43%), Gaps = 20/391 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    +  +D+   +       +   +N ++  +        A   +SE  S G++PN  
Sbjct: 172 KVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVV 231

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  +       +A  + + +      P+  TF ILV+  CK  ++KE   V   M
Sbjct: 232 TYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMM 291

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P++ TYN L+ G C V  V  A  +   +   G+ PD+ +Y  +++GFCK+ + 
Sbjct: 292 MKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKV 351

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++AM L NE   + + PNVVT+N+L +G  K G     + L+  M  R   P+ ++Y+++
Sbjct: 352 DKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSI 411

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K  ++  A+++  +    G +        L+ GLC    E  D+  +        
Sbjct: 412 IDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC--KVEGYDITVN-------- 461

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                     TY ++I    K    DEAL  L    +   IP  +T+   I++L    + 
Sbjct: 462 ----------TYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNEN 511

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           DKA  L   M     +    SY     K+ Q
Sbjct: 512 DKAEKLFREMITRGLLNRSASYPCSSMKIHQ 542



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 185/405 (45%), Gaps = 32/405 (7%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D +   G +     +  L+  L  + E   A+          +  N+  ++ +I   C  
Sbjct: 149 DKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKD 208

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
               +A  +   M   G  PNV T++ L++     G+LK+A+++ +++     KP+  T+
Sbjct: 209 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTF 268

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+ G C   +++E   +   +   G+ PDV TY ++MDG+C V   N A  + N   +
Sbjct: 269 NILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQ 328

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
            GV P++ ++N L NG+CK     K + L   M  +N +P+ ++Y++L++GL K G+I  
Sbjct: 329 GGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISY 388

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG-- 371
           A+ +  +M   G   +    NS++           D L   +QV + +       D G  
Sbjct: 389 ALQLVDQMHDRGVPPNILTYNSII-----------DALFKTHQVDKAIALITKFKDQGIQ 437

Query: 372 ----TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
               TY I+I  L K +               G+     T+N +I   C +G  D+AL L
Sbjct: 438 PSMYTYTILIDGLCKVE---------------GYDITVNTYNVMIHGFCKKGLFDEALSL 482

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           L  M + + IP+  +Y++ I  L    ++  A  L+   + +G++
Sbjct: 483 LSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLL 527



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 173/379 (45%), Gaps = 9/379 (2%)

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
           N+ + AV  F+        P ++ F+ ++        +     +   M   G  PN+   
Sbjct: 65  NDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNC 124

Query: 159 TILVNSLCKSG----RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
            IL+   C+ G    ++ +A    D++  +G   +  +Y  L+ GLC VG    A ++L 
Sbjct: 125 NILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQ 184

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            V    ++ +   Y  V+ G CK    N+A +L +E + +G++PNVVT++ L +G+   G
Sbjct: 185 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVG 244

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
                + L   +   N  PD  +++ L++G  K  K++   ++F  M++ G   D    N
Sbjct: 245 KLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYN 304

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           SL+ G C+        +  A  +F  M +     D  +Y I+I    K KK D+A+   +
Sbjct: 305 SLMDGYCLVKE-----VNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 359

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
                  IP  +T+N++I  L   G+I  AL L+  M++    P+  +Y+ +I  L +  
Sbjct: 360 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTH 419

Query: 455 KSYDACALYGAALKQGVIP 473
           +   A AL      QG+ P
Sbjct: 420 QVDKAIALITKFKDQGIQP 438



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 143/359 (39%), Gaps = 44/359 (12%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N  ++S     + + ND  +A  + + +      P    F  ++ SL KS      L + 
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVG----RVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            +M   G KPN+   N L+   C +G    ++ +A+     +   G   D  +Y  ++ G
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CKVG +  A++LL     + V  N V +NT+  G CK+        L   M  +   P+
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++YS L++G    GK                                        L+DA
Sbjct: 230 VVTYSALISGFFVVGK----------------------------------------LKDA 249

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
             +F K+  +    D  T+ I++    K +K  E        ++ G IP  +T+N+++  
Sbjct: 250 IDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDG 309

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            C   +++ A  +   M +    P   SY++LI    +++K   A  L+     + +IP
Sbjct: 310 YCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIP 368


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 197/429 (45%), Gaps = 21/429 (4%)

Query: 31  VFAAASLSTAESLDLKE---NPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSD 87
            F  ASL+T  SL  +     P +    + + R  +SP      + DS+        VS 
Sbjct: 75  AFTPASLATLHSLAARHCIPPPSASLLSKLLARF-SSPADAASFLRDSLAAGAPAPDVST 133

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN LL AL          + F+      + P+  T+ I++   C      +A KV+D M 
Sbjct: 134 FNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMS 193

Query: 148 DNGYH--PNVTTFTILVNSLCKSGRLKEALEVLDQMGRI--GCKPNIQTYNCLLKGLCYV 203
             G     ++     +V+ LCK GRL++A+  +D+  R   GC PN  TYNCL    C V
Sbjct: 194 SPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRV 253

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI-----ERGVTP 258
           G ++ A +++  ++ +G+ P+V T   ++ G C+VGR   A++   E        RG   
Sbjct: 254 GDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARG--- 310

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           N VT++TL + +         + L   M  +   PD + Y T+++GL + G++  A +I 
Sbjct: 311 NAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIA 370

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
             M + GF++D +  N L+ G C      K  L +A+Q+FE+M       D  TY  ++ 
Sbjct: 371 ASMKKAGFKLDRKAYNILIGGFC-----RKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLS 425

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L K          L + I+ G  P  +TF  ++   C  GK D+AL +   M E    P
Sbjct: 426 CLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQP 485

Query: 439 SRTSYDMLI 447
           +   Y+ LI
Sbjct: 486 NTVIYNTLI 494



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 168/318 (52%), Gaps = 7/318 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP--NSWTFSIMIRC 129
           I + ++K+G   +V   N ++  L  +     A+ FF E  +  L    N+ T+S ++  
Sbjct: 262 IVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSA 321

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           + + N+   A ++   M D GY P+   +  +++ L ++GRL +A  +   M + G K +
Sbjct: 322 FLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLD 381

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
            + YN L+ G C   R+ EA+++   +K  GL+PDVYTY  ++   CK G  +   ELL 
Sbjct: 382 RKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLG 441

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             I+ G  P+VVTF TL +GYCK G   + + + + M +    P+ + Y+TL++ L K  
Sbjct: 442 NMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSR 501

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A+ +F EM       +    N+LL+GL     ++K++ E A+++ ++M ++    D
Sbjct: 502 EVDVAIKLFDEMRENNVPANVTTYNALLKGL-----QDKNMPEKAFELMDQMKEERCTPD 556

Query: 370 PGTYGIVIRTLGKGKKTD 387
             T  +++  L +  +T+
Sbjct: 557 YVTMDVLMEWLPEIGETE 574



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 101/206 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L +  +I  S+KK G       +N L+           A + F E    GL P+ +
Sbjct: 359 QAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVY 418

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++ C C   DF    +++  M D+G  P+V TF  LV+  CK+G+  EAL++   M
Sbjct: 419 TYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSM 478

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           G    +PN   YN L+  LC    V+ A ++   ++ + +  +V TY A++ G       
Sbjct: 479 GEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMP 538

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLF 267
            +A EL+++  E   TP+ VT + L 
Sbjct: 539 EKAFELMDQMKEERCTPDYVTMDVLM 564



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 65/146 (44%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA       ++  ++  DG   SV  F  L+       + + A+K F       + PN+ 
Sbjct: 429 KAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTV 488

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C   +   A K+ D M +N    NVTT+  L+  L      ++A E++DQM
Sbjct: 489 IYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQM 548

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVE 207
               C P+  T + L++ L  +G  E
Sbjct: 549 KEERCTPDYVTMDVLMEWLPEIGETE 574


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 222/474 (46%), Gaps = 48/474 (10%)

Query: 36  SLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMAL 95
           S + A S D +EN     +++ +  +K   L + I +F  + K     S+ +F+ LL A+
Sbjct: 33  SFAGASSDDCREN----LSRKVLQDLK---LDDAIGLFGDMVKSRPFPSIVEFSKLLSAI 85

Query: 96  VMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK---------------------- 133
             +N+ +  +    +  + G++ N +T+SI I  +C +                      
Sbjct: 86  AKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSI 145

Query: 134 -------------NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
                        N   EA  ++D M + GY P+  TFT LV+ L +  +  EA+ ++++
Sbjct: 146 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 205

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC+P++ TY  ++ GLC  G  + A  +L  ++   ++ DV  Y  ++DG CK   
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++A +L N+   +G+ P+V T+N L +  C  G       LL  M ++N  PD + ++ 
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEV-DERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           L++  +K GK+  A  ++ EMV+      D    N+L++G C     +   +E+  +VF 
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC-----KYKRVEEGMEVFR 380

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M+++  V +  TY  +I    + +  D A +     +  G  P  +T+N ++  LC  G
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++ AL++   M +        +Y  +I  L +  K  D   L+ +   +GV P
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 178/359 (49%), Gaps = 9/359 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ + ++K      V  +N ++  L      + A   F++  + G+ P+ +T++ +I C
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI-GCKP 188
            CN   + +A +++  M +   +P++  F  L+++  K G+L EA ++ D+M +   C P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           ++  YN L+KG C   RVEE  E+   +   GL  +  TYT ++ GF +    + A  + 
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
            + +  GV P+++T+N L +G C  G     + + + M+KR+   D ++Y+T++  L K 
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           GK+     +F  +   G + +     +++ G C      K L E+A  +F +M +   + 
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC-----RKGLKEEADALFVEMKEDGPLP 529

Query: 369 DPGTYGIVIRT-LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           + GTY  +IR  L  G +   A + +      G      TF  V   L  +G++DK+ L
Sbjct: 530 NSGTYNTLIRARLRDGDEAASAEL-IKEMRSCGFAGDASTFGLVTNML-HDGRLDKSFL 586



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 136/276 (49%), Gaps = 2/276 (0%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNW-SVSDFN 89
           ++ AS   ++ L+   NP  +     +D  +K   L E   ++D + K    +  V  +N
Sbjct: 301 WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYN 360

Query: 90  DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
            L+         E  ++ F E S  GL  N+ T++ +I  +    D   A+ V   M  +
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 420

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G HP++ T+ IL++ LC +G ++ AL V + M +   K +I TY  +++ LC  G+VE+ 
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
           +++  ++   G+KP+V TYT +M GFC+ G   EA  L  E  E G  PN  T+NTL   
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
             ++G       L+K M+      D  ++  + N L
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 1/114 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++  D+F S+   G   +V  +  ++        +E A   F E    G  PNS 
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           T++ +IR      D   + ++I  M   G+  + +TF ++ N L   GRL ++ 
Sbjct: 533 TYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKSF 585


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 187/397 (47%), Gaps = 6/397 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A    E   + +  K  G   SV  +N +L  L        A++ F E      APN  T
Sbjct: 351 AGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLST 409

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++++I   C   +   A KV D M + G  PNV T  I+++ LCK+ +L EA  + + M 
Sbjct: 410 YNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMN 469

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              C P+  T+  L+ GL   GRV++AY +   + +    P+   YT+++  F K GR  
Sbjct: 470 HKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKE 529

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +  ++  E I RG +P++   N   +   K G   KG  L + +K R  +PD +SYS L+
Sbjct: 530 DGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILI 589

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +GL+K G  R    +F  M   G  +D    N+ + G C      K     AYQ+ E+M 
Sbjct: 590 HGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNK-----AYQLLEEMK 644

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            K       TYG VI  L K  + DEA +    A   G     + ++++I      G+ID
Sbjct: 645 TKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRID 704

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           +A L++  + +    P+  +++ L+  L + E+  +A
Sbjct: 705 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 741



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 196/447 (43%), Gaps = 41/447 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E +  F+ +KKD    ++S +N L+  L    E E A K        GL PN  
Sbjct: 385 KKGRLGEALRTFEEMKKDAAP-NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVM 443

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCM------------------------FDNGYH----- 152
           T +IMI   C      EA  + + M                         D+ Y      
Sbjct: 444 TVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQM 503

Query: 153 ------PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
                 PN   +T L+ S  K GR ++  ++  +M   GC P+++  N  +  +   G  
Sbjct: 504 LDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGET 563

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            +   +   +K+ G  PDV +Y+ ++ G  K G + E  EL     E+G   +   +NT 
Sbjct: 564 GKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTF 623

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G+CK G   K   LL+ MK +   P  ++Y ++++GL K  ++  A  +F+E    G 
Sbjct: 624 IDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGL 683

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           E++  + +SL+ G     + +   +++AY + E++ +K    +  T+  ++  L K ++ 
Sbjct: 684 ELNVVIYSSLIDG-----FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 738

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           +EAL+   +   +   P  IT++ +I  LC   K +KA +    M +    P+  +Y  +
Sbjct: 739 NEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTM 798

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I  L +     +A +L+      G +P
Sbjct: 799 IAGLAKAGNIAEASSLFERFKANGGVP 825



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 175/365 (47%), Gaps = 5/365 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF  +   G +  +   N  +  +    E       F E  S G  P+  ++SI+I    
Sbjct: 534 IFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLV 593

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 E  ++   M + G   +   +   ++  CKSG++ +A ++L++M   G +P + 
Sbjct: 594 KAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVV 653

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  ++ GL  + R++EAY +    K++GL+ +V  Y++++DGF KVGR +EA  ++ E 
Sbjct: 654 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 713

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+TPNV T+N L +   K     + +   + MK     P+ I+YS L+NGL +  K 
Sbjct: 714 MQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKF 773

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A   ++EM + G + +     +++ GL      +   + +A  +FE+      V D  
Sbjct: 774 NKAFVFWQEMQKQGLKPNTITYTTMIAGLA-----KAGNIAEASSLFERFKANGGVPDSA 828

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           +Y  +I  L   ++  EA          G    T T   ++ AL  +  +++A ++  ++
Sbjct: 829 SYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVL 888

Query: 432 YEHAK 436
            E AK
Sbjct: 889 REIAK 893



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 181/387 (46%), Gaps = 16/387 (4%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+ +      +E   K F E    G +P+    +  + C     +  + R + + + 
Sbjct: 515 YTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIK 574

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G+ P+V +++IL++ L K+G  +E  E+   M   GC  +   YN  + G C  G+V 
Sbjct: 575 SRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVN 634

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +AY++L  +K  G +P V TY +V+DG  K+ R +EA  L  EA   G+  NVV +++L 
Sbjct: 635 KAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLI 694

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G+ K G   +   +++ + ++   P+  +++ LL+ L+K  +I  A+  F+ M      
Sbjct: 695 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGT 754

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +    + L+ GLC      K     A+  +++M K+    +  TY  +I  L K     
Sbjct: 755 PNHITYSILINGLCRVRKFNK-----AFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIA 809

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS-RTSYDML 446
           EA          G +P + ++N +I+ L    +  +A    + ++E  ++          
Sbjct: 810 EASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEA----YKIFEETRMKGCNIHTKTC 865

Query: 447 ITKLDQLEKSYDAC----ALYGAALKQ 469
           I  LD L+K  D C    A+ GA L++
Sbjct: 866 IALLDALQK--DECLEQAAIVGAVLRE 890



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 47/416 (11%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK++ L+E  D+   ++K     + S +  L+ AL  + E +  +  F +          
Sbjct: 174 IKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQ---------- 223

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
                                    M + GY  +V  FT ++    + GRL  AL +LD+
Sbjct: 224 -------------------------MQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDE 258

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M       +I  YN  +      G+V+ A++    +K+ GL PD  TYT+++   CK  R
Sbjct: 259 MKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNR 318

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+E+  +  +    P    +NT+  GY   G   +   LL+  K R C+P  I+Y+ 
Sbjct: 319 LDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNC 378

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +L  L K G++  A+  F+EM +     +    N L+  LC K+ E    +E A++V + 
Sbjct: 379 ILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLC-KAGE----VEAAFKVRDA 432

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEA---LIHLHHAIEMGHIPRTITFNNVIQALCG 417
           M +     +  T  I+I  L K KK DEA      ++H I     P  +TF ++I  L  
Sbjct: 433 MKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKI---CSPDEVTFCSLIDGLGK 489

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +G++D A  L   M +  KIP+   Y  LI    +  +  D   ++   + +G  P
Sbjct: 490 QGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSP 545



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 129/280 (46%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA   +E  ++F ++K+ G       +N  +       +   A +   E  + G  P  
Sbjct: 593 VKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTV 652

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+  +I      +   EA  + +    NG   NV  ++ L++   K GR+ EA  ++++
Sbjct: 653 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEE 712

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           + + G  PN+ T+NCLL  L     + EA     N+KN    P+  TY+ +++G C+V +
Sbjct: 713 LMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRK 772

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            N+A     E  ++G+ PN +T+ T+  G  K G   +   L +  K    +PD  SY+ 
Sbjct: 773 FNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNA 832

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           ++ GL    +   A  IF+E    G  +  +   +LL  L
Sbjct: 833 IIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDAL 872



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 1/252 (0%)

Query: 57  FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           F+D   K+  + +   + + +K  G   +V  +  ++  L  ++  + A   F EA S G
Sbjct: 623 FIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 682

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           L  N   +S +I  +       EA  +++ +   G  PNV T+  L+++L K+  + EAL
Sbjct: 683 LELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 742

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
                M  +   PN  TY+ L+ GLC V +  +A+     ++  GLKP+  TYT ++ G 
Sbjct: 743 VCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGL 802

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
            K G   EA  L       G  P+  ++N +  G       M+   + +  + + C    
Sbjct: 803 AKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHT 862

Query: 296 ISYSTLLNGLLK 307
            +   LL+ L K
Sbjct: 863 KTCIALLDALQK 874


>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
 gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
          Length = 447

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 176/333 (52%), Gaps = 12/333 (3%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           A N  ++ I+++ +C   +F +A +++D M  NG  PNV   T ++  LC +G++ +AL 
Sbjct: 27  AVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALL 86

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
              ++G   C PN+ TY+ L+  LC  G+  EAY ++  +   G  P+V TY A++DGF 
Sbjct: 87  HFRRIGE-DCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFR 145

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K+ R +E + LL E  +RG   +V+T+  + + +CK  +  +   LL  ++KRN     +
Sbjct: 146 KLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNV----V 201

Query: 297 SYSTLLNGL--LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
           +Y++L   L   +  +   A+S+ ++M++ G   ++    ++L  LC  S      L++A
Sbjct: 202 TYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSR-----LDEA 256

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           YQV   M  +   TD  +Y I++       +T ++L  L   +  G+I  T T N VI  
Sbjct: 257 YQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHK 316

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            C  G + +A  L   MY+   IPS  +Y+ LI
Sbjct: 317 FCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLI 349



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 196/422 (46%), Gaps = 51/422 (12%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA----RKV-IDC 145
           L+       E + A++   E  S G+ PN    + +IR  C      +A    R++  DC
Sbjct: 36  LMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDC 95

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
                  PNV T++ LV++LCKSG+  EA  ++ +M + GC PN+ TYN L+ G   + R
Sbjct: 96  A------PNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLER 149

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG-------------------------- 239
           ++E   +L  +   G + DV TYT ++D FCK                            
Sbjct: 150 LDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTA 209

Query: 240 -------RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                  R+ EA+ LL + I+ G  PN V + T+    CK     +   +L  M  + C 
Sbjct: 210 LSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCK 269

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            D +SY  L+      G+   ++ +   M+  G+ +D + MN ++   C K+ +    L 
Sbjct: 270 TDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFC-KAGD----LH 324

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +A+Q+F+ M ++ S+    TY  +I    K ++ D A+  LH  I+    P  IT+N++I
Sbjct: 325 EAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSII 384

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           ++ C E + ++A  +  +M ++   P R SY  L  KL + E +     ++   L++   
Sbjct: 385 KSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL--KLSKNEAAIYDQKVHDTYLRKHFD 442

Query: 473 PQ 474
           PQ
Sbjct: 443 PQ 444



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 143/285 (50%), Gaps = 8/285 (2%)

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           +Y  L++G C  G  ++A E+L  +K++G++P+V  +T ++ G C  G+ ++A+ L    
Sbjct: 32  SYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL-LHFRR 90

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I     PNV T++TL +  CK G P +  GL+  M K+ C P+ ++Y+ L++G  K  ++
Sbjct: 91  IGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERL 150

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
              + + KEM + G   D      +L   C     + + +++AY++   + K+  VT   
Sbjct: 151 DEVLMLLKEMSQRGCRADVITYTMILDIFC-----KNNSIDEAYRLLNALEKRNVVTYNS 205

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            +  +  +  +G +T EAL  L   I+ G  P  + +  V+  LC   ++D+A  +L  M
Sbjct: 206 LFTAL--STAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSM 263

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           Y         SY +L+       ++YD+  L G  L  G I   K
Sbjct: 264 YSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTK 308



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 150/314 (47%), Gaps = 11/314 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+    E   +   + K G + +V  +N L+     L   +  +    E S  G   +  
Sbjct: 111 KSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVI 170

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL--CKSGRLKEALEVLD 179
           T+++++  +C  N   EA ++++ +       NV T+  L  +L   +  R  EAL +L+
Sbjct: 171 TYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTYNSLFTALSTAEGDRTTEALSLLE 226

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M + G +PN   Y  +L  LC   R++EAY++L+++ + G K D  +Y  ++  F   G
Sbjct: 227 KMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAG 286

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R+ +++ELL   +  G   +  T N + + +CK G   +   L K M +R  +P  ++Y+
Sbjct: 287 RTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYN 346

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL+    K  +   AV +  +M++  F+ +    NS+++  C +  E     E+A  +F+
Sbjct: 347 TLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQRE-----EEARGIFQ 401

Query: 360 KMTKKVSVTDPGTY 373
            M       D  +Y
Sbjct: 402 MMVDNGCFPDRVSY 415



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 111/220 (50%), Gaps = 2/220 (0%)

Query: 84  SVSDFNDLLMALVMLNEQET--AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           +V  +N L  AL       T  A+    +    G  PN   +  ++   C  +   EA +
Sbjct: 199 NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQ 258

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V+  M+  G   +  ++ ILV +   +GR  ++LE+L +M   G   + +T N ++   C
Sbjct: 259 VLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFC 318

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G + EA+++  ++   G  P   TY  ++  FCK  + + A++LL++ I+    PNV+
Sbjct: 319 KAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVI 378

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           T+N++   +C+E    +  G+ ++M    C PD++SY+TL
Sbjct: 379 TYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 99/199 (49%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + + + + ++GT  +  ++  +L+ L   +  + A +      S G   +  ++ I++
Sbjct: 220 EALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILV 279

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             + N    +++ +++  M  +GY  +  T  ++++  CK+G L EA ++   M + G  
Sbjct: 280 VAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSI 339

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TYN L+   C   + + A ++L  +     KP+V TY +++  FC+  R  EA  +
Sbjct: 340 PSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGI 399

Query: 248 LNEAIERGVTPNVVTFNTL 266
               ++ G  P+ V++ TL
Sbjct: 400 FQMMVDNGCFPDRVSYTTL 418



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 79/170 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S L E   +  S+   G       +  L++A         +++        G   ++ 
Sbjct: 249 KNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTK 308

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T +++I  +C   D  EA ++   M+  G  P+  T+  L+ + CK+ +   A+++L QM
Sbjct: 309 TMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQM 368

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
            +   KPN+ TYN ++K  C   R EEA  +   + ++G  PD  +YT +
Sbjct: 369 IQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 200/398 (50%), Gaps = 20/398 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N   +A V  +    AV  ++  +  G   + PN  T+ I+I 
Sbjct: 41  VFDELLRRGRGASIYGLN-CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIG 99

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
             C           +  +   G+  +   FT L+  LC   R  +A++ VL +M ++GC 
Sbjct: 100 SCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCI 159

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDGFCKVGRSNEAM 245
           PN+ +YN LLKGLC   R +EA E+L  + +DG    PDV +YT V++GF K G  ++A 
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
              +E ++RG+ PNVVT++++    CK     K + +L  M K   +P+  +Y+++++G 
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G+ + A+   K+M   G E D    NSL+  LC     +     +A ++F+ MTK+ 
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC-----KNGRCTEARKMFDSMTKRG 334

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGKI 421
              +  TYG    TL +G  T  AL+ +H  +++    G  P    F+ +I A   +GK+
Sbjct: 335 LKPEITTYG----TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           D+A+L+   M +    P   +Y  +I  L +  +  DA
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 169/345 (48%), Gaps = 18/345 (5%)

Query: 58  VDRIKASPL-------KERIDIFDSIKKDGTNW----SVSDFNDLLMALVMLNEQETAVK 106
           VD I  +PL       K   D  D + +  T      +V  +N LL  L   N  + A++
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183

Query: 107 FFSEASSYG--LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
                   G    P+  +++ +I  +  + D  +A      M D G  PNV T++ ++ +
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           LCK+  + +A+EVL  M + G  PN +TYN ++ G C  G+ +EA   L  + +DG++PD
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V TY ++MD  CK GR  EA ++ +   +RG+ P + T+ TL  GY  +G  ++  GLL 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           LM +    P+   +S L+    K GK+  A+ +F +M + G   D     +++  LC   
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC--- 420

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
             +   +EDA + FE+M  +        Y  +I +L    K D+A
Sbjct: 421 --KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 120/232 (51%), Gaps = 3/232 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  ++ ++ AL      + A++  +     G+ PN  T++ ++  YC+     EA   +
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M  +G  P+V T+  L++ LCK+GR  EA ++ D M + G KP I TY  LL+G    
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G + E + +L  +  +G+ P+ Y ++ ++  + K G+ ++AM + ++  ++G+ P+ VT+
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL---KWGKIR 312
            T+    CK G     +   + M      P  I Y++L++ L    KW K +
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 149/343 (43%), Gaps = 47/343 (13%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK---PNIQTYN 194
           +AR V D +   G   ++      +  + +      A+   ++M R G     PN+ TY 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEAIE 253
            L+   C  GR++  +  L NV   G + D   +T ++ G C   R+++AM++ L    +
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR--NCLPDKISYSTLLNGLLKWGKI 311
            G  PNV ++N L  G C E    + + LL++M     +C PD +SY+T++NG  K G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD- 214

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
                                                  L+ AY  + +M  +  + +  
Sbjct: 215 ---------------------------------------LDKAYGTYHEMLDRGILPNVV 235

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L K +  D+A+  L   ++ G +P   T+N+++   C  G+  +A+  L  M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +     P   +Y+ L+  L +  +  +A  ++ +  K+G+ P+
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 63/143 (44%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FDS+ K G    ++ +  LL                      G+ PN + FSI+I  Y 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    +A  V   M   G +P+  T+  ++  LCKSGR+++A+   +QM      P   
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 192 TYNCLLKGLCYVGRVEEAYEMLM 214
            YN L+  LC   + ++A +  +
Sbjct: 446 VYNSLIHSLCIFDKWDKAKDYFL 468


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 198/413 (47%), Gaps = 6/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA   +E   +FD     G   ++  +N ++  L    + + A        + G+ PN 
Sbjct: 406 LKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNV 464

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++ MI  +C K +   A  V   M      PNV T++IL++   K G  ++AL++ DQ
Sbjct: 465 VSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQ 524

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M  +   P   T+N ++ GLC VG++ EA + L N   +G  P   TY +++DGF K G 
Sbjct: 525 MLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGN 584

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A+ +  E  E GV+PNVVT+ +L NG+CK       +     M+++    D  +YS 
Sbjct: 585 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSA 644

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G  K   +  A  +F E++  G   +  + NS++ G     + + + +E A   ++K
Sbjct: 645 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG-----FRDLNNMEAALVWYKK 699

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M       D GTY  +I  L K  +   A       +  G +P  ITF+ ++  LC +G+
Sbjct: 700 MINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQ 759

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++ A  +L  M      PS   Y+ LI    +     +A  L+   L +G++P
Sbjct: 760 LENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVP 812



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 220/457 (48%), Gaps = 16/457 (3%)

Query: 26  FNKLVVFAAASLSTAESLDLKEN------PRSLQAQRFVDR--IKASPLKERIDIFDSIK 77
           F  ++V   A  +  E+L LKE       P +L     + +       L   +++F+ I 
Sbjct: 293 FTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKIT 352

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           +DG   +   ++ L+         E A + +++    G+ P+ +  + ++R Y     + 
Sbjct: 353 EDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWE 412

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA K+ D   D G   N+ T+ I+++ LCK G++ EA  +LD M   G  PN+ +YN ++
Sbjct: 413 EASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMI 471

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G C  G ++ A  +  ++    LKP+V TY+ ++DG  K G S +A++L ++ +   + 
Sbjct: 472 LGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIA 531

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P   TFNT+ NG CK G   +    LK   +   +P  ++Y+++++G +K G I  A+++
Sbjct: 532 PTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAV 591

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           ++EM  FG   +     SL+ G C     + + ++ A +  ++M +K    D   Y  +I
Sbjct: 592 YREMCEFGVSPNVVTYTSLINGFC-----KSNRIDLALKTRDEMREKGLELDVTAYSALI 646

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               K +  + A       +E+G  P  I +N++I        ++ AL+    M  + +I
Sbjct: 647 DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI-NDRI 705

Query: 438 P-SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P    +Y  LI  L +  +   A  LY   L +G++P
Sbjct: 706 PCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 742



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 188/406 (46%), Gaps = 6/406 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ + +K+ G   S + F  +++A V       A++   E  + G   N    + +++ 
Sbjct: 275 LELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKG 334

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC + +   A  + + + ++G  PN  T+++L+   C SG +++A E+  QM   G  P+
Sbjct: 335 YCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPS 394

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           +   N LL+G       EEA ++     + G+  +++TY  +M   CK G+ +EA  LL+
Sbjct: 395 VFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLD 453

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             + +G+ PNVV++N +  G+C++G       +   M  R+  P+ ++YS L++G  K G
Sbjct: 454 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKG 513

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
               A+ +F +M+       +   N+++ GLC     +   + +A    +   ++  +  
Sbjct: 514 DSEKALDLFDQMLSLNIAPTDFTFNTIINGLC-----KVGQMSEARDKLKNFLEEGFIPS 568

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  ++    K    D AL       E G  P  +T+ ++I   C   +ID AL    
Sbjct: 569 CMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRD 628

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            M E       T+Y  LI    +      A  L+   L+ G+ P R
Sbjct: 629 EMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNR 674



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 6/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN LL A +  N  E A+  F+      + P     +I++     +N   E R + + M 
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 212

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G + +  T  ++V +  K GR++EA E   +    G K +   Y+ +++ +C      
Sbjct: 213 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 272

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
              E+L  +K  G  P   T+T+V+      G   EA+ L  E I  G   N+V   +L 
Sbjct: 273 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 332

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            GYC +G     + L   + +    P+K++YS L+ G    G I  A  ++ +M   G  
Sbjct: 333 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 392

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                +NSLLRG     + +  L E+A ++F++      V +  TY I++  L KG K D
Sbjct: 393 PSVFNVNSLLRG-----YLKAPLWEEASKLFDEAV-DCGVANIFTYNIMMSWLCKGGKMD 446

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA   L + +  G +P  +++N++I   C +G +D A  +   M      P+  +Y +LI
Sbjct: 447 EACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILI 506

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +   S  A  L+   L   + P
Sbjct: 507 DGNFKKGDSEKALDLFDQMLSLNIAP 532



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 173/381 (45%), Gaps = 41/381 (10%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A ++F E    G+  ++  +SI+I+  C K +     ++++ M + G+ P+  TFT +
Sbjct: 237 EEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSV 296

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + +    G + EAL + ++M   G   N+     L+KG C  G ++ A  +   +  DGL
Sbjct: 297 IVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGL 356

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY----------- 270
            P+  TY+ +++G C  G   +A EL  +    G+ P+V   N+L  GY           
Sbjct: 357 FPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASK 416

Query: 271 -----------------------CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
                                  CK G   +   LL  M  +  +P+ +SY+ ++ G  +
Sbjct: 417 LFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCR 476

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM-TKKVS 366
            G +  A S+F +M+    + +    + L+ G   K   EK     A  +F++M +  ++
Sbjct: 477 KGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK-----ALDLFDQMLSLNIA 531

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
            TD  T+  +I  L K  +  EA   L + +E G IP  +T+N+++     EG ID AL 
Sbjct: 532 PTD-FTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 590

Query: 427 LLFLMYEHAKIPSRTSYDMLI 447
           +   M E    P+  +Y  LI
Sbjct: 591 VYREMCEFGVSPNVVTYTSLI 611



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 139/278 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  D   +  ++G   S   +N ++   +     ++A+  + E   +G++PN  
Sbjct: 546 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVV 605

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C  N    A K  D M + G   +VT ++ L++  CK   ++ A ++  ++
Sbjct: 606 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 665

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G  PN   YN ++ G   +  +E A      + ND +  D+ TYT ++DG  K GR 
Sbjct: 666 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 725

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A +L  E + +G+ P+++TF+ L NG C +G       +L+ M ++N  P  + Y+TL
Sbjct: 726 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 785

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + G  + G ++ A ++  EM+  G   D+   + L+ G
Sbjct: 786 IAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 147/341 (43%), Gaps = 41/341 (12%)

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           +I+C     +  +   F  L+N+  ++ R++ A++  + M      P +   N LL  L 
Sbjct: 137 LINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALV 196

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
               + E  ++   +   G+  D +T   ++    K GR  EA E   E  ERGV  +  
Sbjct: 197 RRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAG 256

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            ++ +    CK+     G+ LL+ MK+R  +P + ++++++   +  G +  A+ + +EM
Sbjct: 257 AYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEM 316

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +  G  ++  +  SL++G C +       L+ A  +F K+T+     +  TY ++I    
Sbjct: 317 INCGKPMNLVVATSLMKGYCAQGN-----LDSALNLFNKITEDGLFPNKVTYSVLIEGCC 371

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTI----------------------------------- 406
                ++A   L+  +++  IP ++                                   
Sbjct: 372 NSGNIEKA-SELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIF 430

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           T+N ++  LC  GK+D+A  LL  M     +P+  SY+ +I
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMI 471


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 194/406 (47%), Gaps = 5/406 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E ++ F  IK+ G   ++   N +L   + LN  + A   ++E     +  + +TF+IMI
Sbjct: 164 EALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMI 223

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C +    +A++ I  M   G  PNV T+  +++  C  G+ + A  +   M   G +
Sbjct: 224 NVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLE 283

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TYN  + GLC  GR+EEA  ++  +   GL P+  TY A++DG+C  G  ++A   
Sbjct: 284 PDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAY 343

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E I +G+  ++VT+N   +    EG       ++K M+++  +PD ++++ L+NG  +
Sbjct: 344 RDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCR 403

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G  + A  +  EMV  G +       SL+  L      +++ +++A  +F K+ ++  +
Sbjct: 404 CGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVL-----GKRNRMKEADALFSKIQQEGLL 458

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D   +  +I         D A   L     M  +P  IT+N ++Q  C EGK+++A  L
Sbjct: 459 PDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQL 518

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L  M      P   SY+ LI+   +     DA  +    +  G  P
Sbjct: 519 LDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDP 564



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF ++K  G       +N  +  L      E A     +    GL PN+ T++ +I  YC
Sbjct: 273 IFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYC 332

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           NK D  +A    D M   G   ++ T+ + +++L   GR+ +A  ++ +M   G  P+  
Sbjct: 333 NKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAV 392

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+N L+ G C  G  + A+ +L  +   G++P + TYT+++    K  R  EA  L ++ 
Sbjct: 393 THNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKI 452

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            + G+ P+++ FN L +G+C  G   +   LLK M     LPD+I+Y+TL+ G  + GK+
Sbjct: 453 QQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKV 512

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +  EM R G + D    N+L+ G     + ++  ++DA++V ++M    +  DP 
Sbjct: 513 EEARQLLDEMKRRGIKPDHISYNTLISG-----YSKRGDMKDAFRVRDEMM--TTGFDPT 565

Query: 372 --TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
             TY  +I+ L K ++ + A   L   +  G  P   T+ ++I+A+
Sbjct: 566 ILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 182/406 (44%), Gaps = 40/406 (9%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+  FN ++  L    + + A +F     + G+ PN  T++ +I  +C +  F  AR + 
Sbjct: 215 SLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIF 274

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M D G  P+  T+   ++ LCK GRL+EA  ++ +M   G  PN  TYN L+ G C  
Sbjct: 275 QTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNK 334

Query: 204 GRVEEAY-----------------------------------EMLMNVKNDGLKPDVYTY 228
           G +++AY                                    M+  ++  G+ PD  T+
Sbjct: 335 GDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTH 394

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
             +++G+C+ G +  A  LL+E + +G+ P +VT+ +L     K     +   L   +++
Sbjct: 395 NILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQ 454

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
              LPD I ++ L++G    G I  A  + KEM       DE   N+L++G C +     
Sbjct: 455 EGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGK--- 511

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             +E+A Q+ ++M ++    D  +Y  +I    K     +A       +  G  P  +T+
Sbjct: 512 --VEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTY 569

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
           N +IQ LC   + + A  LL  M      P  ++Y  +I  ++ ++
Sbjct: 570 NALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVD 615



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 172/387 (44%), Gaps = 30/387 (7%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           A  +  F +++R YC      EA +    + + G+ PN+ T   +++   K  R + A  
Sbjct: 143 AKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWV 202

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +  +M R+  + ++ T+N ++  LC  G++++A E + +++  G+KP+V TY  ++ G C
Sbjct: 203 LYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHC 262

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
             G+   A  +     ++G+ P+  T+N+  +G CKEG   +  GL+  M +   +P+ +
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAV 322

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-----------KSW 345
           +Y+ L++G    G +  A +   EM+  G        N  +  L M           K  
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382

Query: 346 EEKDLLED-------------------AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
            EK ++ D                   A+ + ++M  K       TY  +I  LGK  + 
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            EA        + G +P  I FN +I   C  G ID+A  LL  M     +P   +Y+ L
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTL 502

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           +    +  K  +A  L     ++G+ P
Sbjct: 503 MQGYCREGKVEEARQLLDEMKRRGIKP 529



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 58/120 (48%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+       + E A +   E    G+ P+  +++ +I  Y  + D  +A +V D M 
Sbjct: 499 YNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMM 558

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G+ P + T+  L+  LCK+   + A E+L +M   G  P+  TY  +++ +  V  +E
Sbjct: 559 TTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 187/389 (48%), Gaps = 5/389 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  FN +L +   +    TAV         G+ P+  T +I+I C+C+         V+ 
Sbjct: 59  IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY P+  T   L+  LC  G++K+AL   D++   G + N  +Y  L+ G+C +G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIG 178

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A ++L  +     KP+V  Y+ ++D  CK    +EA  L +E   +G++ +VVT++
Sbjct: 179 DTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYS 238

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL  G+C EG   + +GLL  M  +   P+  +Y+ L++ L K GK++ A S+   M++ 
Sbjct: 239 TLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA 298

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             + D    ++L+ G  +  +E K     A  VF  M+      D  TY I+I    K K
Sbjct: 299 CVKPDVITYSTLMDGYFL-VYEVK----KAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             DEAL       +   +P  +T++++I  LC  G+I     L+  M++  +  +  +Y 
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYS 413

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            LI  L +      A AL+     QG+ P
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQGIRP 442



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 187/385 (48%), Gaps = 5/385 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +   D +   G   +   +  L+  +  + +   A+K   +       PN   +S 
Sbjct: 145 VKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYST 204

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G   +V T++ L+   C  G+LKEA+ +L++M    
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ TYN L+  LC  G+V+EA  +L  +    +KPDV TY+ +MDG+  V    +A 
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + N     GVTP+V T+  L NG+CK     + + L K M ++N +P  ++YS+L++GL
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I     +  EM   G   +    +SL+ GLC         L+ A  +F KM  + 
Sbjct: 385 CKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGH-----LDRAIALFNKMKDQG 439

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  T+ I++  L KG +  +A       +  G+     T+N +I   C +G +++AL
Sbjct: 440 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEAL 499

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL 450
            +L  M ++  IP   +++++I  L
Sbjct: 500 TMLSKMEDNGCIPDAVTFEIIIIAL 524



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 182/354 (51%), Gaps = 5/354 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    +  I +   I    T  +V  ++ ++ AL        A   FSE +  G++ +  
Sbjct: 176 KIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  +C +    EA  +++ M     +PNV T+ ILV++LCK G++KEA  VL  M
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +   KP++ TY+ L+ G   V  V++A  +   +   G+ PDV+TYT +++GFCK    
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA+ L  E  ++ + P +VT+++L +G CK G       L+  M  R    + I+YS+L
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSL 415

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K G +  A+++F +M   G   +      LL GLC     +   L+DA +VF+ +
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLC-----KGGRLKDAQEVFQDL 470

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
             K    +  TY ++I    K    +EAL  L    + G IP  +TF  +I AL
Sbjct: 471 LTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIAL 524



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 168/335 (50%), Gaps = 6/335 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + K   + E   +F  +   G +  V  ++ L+    +  + + A+  
Sbjct: 197 PNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGL 256

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            +E     + PN +T++I++   C +    EA+ V+  M      P+V T++ L++    
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              +K+A  V + M  +G  P++ TY  L+ G C    V+EA  +   +    + P + T
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y++++DG CK GR     +L++E  +RG   NV+T+++L +G CK G   + + L   MK
Sbjct: 377 YSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMK 436

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            +   P+  +++ LL+GL K G+++ A  +F++++  G+ ++    N ++ G C     +
Sbjct: 437 DQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHC-----K 491

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
           + LLE+A  +  KM     + D  T+ I+I  L K
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 125/248 (50%), Gaps = 2/248 (0%)

Query: 103  TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
            TAV         G+ P+ +T +I+I C+C+         ++  +   GYHP+  TFT L+
Sbjct: 944  TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLI 1003

Query: 163  NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
            N LC  G++ +AL   D++   G + N  +Y  L+ G+C +G    A ++L  +     K
Sbjct: 1004 NGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTK 1063

Query: 223  PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
            PDV  Y  ++D  CK    ++A  L  E   +G++ +VVT+NTL  G+C  G   + +GL
Sbjct: 1064 PDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGL 1123

Query: 283  LKLMKKRNCLPDKISYSTLLNGLLKWGK--IRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            L  M  +   P+  +Y+ L++ L K GK  +  ++S+  +M   G + +      ++  L
Sbjct: 1124 LNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183

Query: 341  CMKSWEEK 348
              K   +K
Sbjct: 1184 FEKDENDK 1191



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 48/279 (17%)

Query: 185  GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
            G +P++ T N L+   C++G++   + +L  +   G  PD  T+T +++G C  G+ N+A
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 245  MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            +   ++ + +G   N V++ TL NG CK G     + LL+ +  R   PD + Y+T+++ 
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075

Query: 305  LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
            L K   +  A  +F EM   G   D    N+L+ G C+        L++A  +  KM   
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGK-----LKEAIGLLNKM--- 1127

Query: 365  VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK--ID 422
                       V++T+                      P   T+N ++ ALC EGK  +D
Sbjct: 1128 -----------VLKTIN---------------------PNVRTYNILVDALCKEGKDLLD 1155

Query: 423  KALLLLFLMYEHAKIPSRTSYDMLITKL------DQLEK 455
            ++L +L  M ++    +  +++++I+ L      D++EK
Sbjct: 1156 ESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 8/263 (3%)

Query: 38   STAESLDLKENPRSLQAQRFVDRI------KASPLKERIDIFDSIKKDGTNWSVSDFNDL 91
            STA SL  +   + +Q   F   I          +     I   I K G +     F  L
Sbjct: 943  STAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTL 1002

Query: 92   LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
            +  L +  +   A+ F  +  + G   N  ++  +I   C   D   A K++  +     
Sbjct: 1003 INGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLT 1062

Query: 152  HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
             P+V  +  ++++LCK   + +A  +  +M   G   ++ TYN L+ G C VG+++EA  
Sbjct: 1063 KPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIG 1122

Query: 212  MLMNVKNDGLKPDVYTYTAVMDGFCKVGRS--NEAMELLNEAIERGVTPNVVTFNTLFNG 269
            +L  +    + P+V TY  ++D  CK G+   +E++ +L++  + G   N VTF  + + 
Sbjct: 1123 LLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISA 1182

Query: 270  YCKEGTPMKGVGLLKLMKKRNCL 292
              ++    K   LL  M  R  L
Sbjct: 1183 LFEKDENDKVEKLLHEMIARGLL 1205



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 113/262 (43%), Gaps = 30/262 (11%)

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A+   N  +    TP ++ FN + + + K       V L   ++ +   PD I+ + L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK------DLLEDAY 355
           +N     G+I    S+  ++++ G+  D   +N+L++GLC+K   +K       LL   +
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 356 QVFE--------------------KMTKKVS--VTDPGT--YGIVIRTLGKGKKTDEALI 391
           Q+ +                    K+ +K+   +T P    Y  +I  L K +   EA  
Sbjct: 161 QLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYG 220

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
                   G     +T++ +I   C EGK+ +A+ LL  M      P+  +Y++L+  L 
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           +  K  +A ++    LK  V P
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKP 302



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 79/199 (39%), Gaps = 16/199 (8%)

Query: 253  ERGVTPNVVTFNTLFNGYCKEGTPMK----GVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
            ERGVT          N       PMK     V L   ++ +   PD  + + L+N     
Sbjct: 922  ERGVTSVGAYIRIPHN-------PMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHM 974

Query: 309  GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
            G+I    SI  ++++ G+  D     +L+ GLC+K    K     A    +K+  +    
Sbjct: 975  GQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK-----ALHFHDKLLAQGFQL 1029

Query: 369  DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            +  +YG +I  + K   T  A+  L         P  + +N +I ALC    + KA  L 
Sbjct: 1030 NQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLF 1089

Query: 429  FLMYEHAKIPSRTSYDMLI 447
            F M          +Y+ LI
Sbjct: 1090 FEMNVKGISADVVTYNTLI 1108


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 182/367 (49%), Gaps = 11/367 (2%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  L  ++  + AV    E    G  P+  TF+++I   C K DF    K++D MF  G
Sbjct: 222 LMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKG 281

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PN  T+  L++ LC  G+L +AL +LD+M    C PN  TY  ++ GL   GR  +  
Sbjct: 282 CVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGA 341

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L+ ++  G   + Y Y+ ++ G  K G+S EAM L  E++++G   N V ++ L +G 
Sbjct: 342 RVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGL 401

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C++  P + + +L  M  + C P+  ++S+L+ G  + G    A+ ++K+M +     +E
Sbjct: 402 CRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENE 461

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              + L+ GLC    ++  ++E A  V+ KM       D   Y  +I+ L      +EAL
Sbjct: 462 VCYSVLIHGLC----KDGKVME-AMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEAL 516

Query: 391 IHLHH--AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD---- 444
              +    +E    P  IT+N +  ALC +  I +A+ LL  M +    P   + +    
Sbjct: 517 KLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLR 576

Query: 445 MLITKLD 451
           ML  KLD
Sbjct: 577 MLREKLD 583



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 193/393 (49%), Gaps = 20/393 (5%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSE---ASSYGLAPNSWTFSIMIRCYC------NKN 134
           +V  FN +L  ++     + A++F++    A    + PN  +F+++I+  C      N  
Sbjct: 142 TVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAI 201

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
           + F    V  C+      P+  T+  L++ LCK  R+ EA+ +LD+M   GC P+  T+N
Sbjct: 202 ELFREMPVRKCV------PDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFN 255

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+ GLC  G      +++ N+   G  P+  TY  ++ G C  G+ ++A+ LL+  +  
Sbjct: 256 VLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSS 315

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
              PN VT+ T+ NG  K+G  + G  +L LM++R  + ++  YS L++GL K GK   A
Sbjct: 316 KCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEA 375

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           + +FKE +  G +++  + ++L+ GLC     +     +A ++  +MT K    +  T+ 
Sbjct: 376 MRLFKESMDKGCKLNTVLYSALVDGLCRDRKPD-----EAMKILSEMTDKGCAPNAFTFS 430

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            +++   +   + +A+       ++      + ++ +I  LC +GK+ +A+++   M   
Sbjct: 431 SLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLAT 490

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
              P   +Y  +I  L       +A  LY   L
Sbjct: 491 GCRPDVVAYSSMIQGLCDAGSVEEALKLYNEML 523



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 211/465 (45%), Gaps = 52/465 (11%)

Query: 47  ENPRSLQAQRFVDRIKASPLKERIDIFDSIK-KDGTNWSV-------SDFNDLLMALVML 98
           EN    ++    D+I +SP K       S K  D T +S+       SDFN L     +L
Sbjct: 44  ENGSEPESSPISDKIFSSPPK-----MGSFKVGDSTFYSLIENYAYSSDFNSLEK---VL 95

Query: 99  NEQETAVKFFSEAS------SYGLA--PNSWT---FSIMIRCYCNKNDFFEARKVIDCMF 147
           N      + FSE S      +YG A  PN      + +    YC K        V++ + 
Sbjct: 96  NRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYC-KPTVKSFNSVLNVII 154

Query: 148 DNGYH-------------------PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
             G+H                   PNV +F +++ S+CK G +  A+E+  +M    C P
Sbjct: 155 QAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVP 214

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           +  TY  L+ GLC V R++EA  +L  ++ +G  P   T+  +++G CK G      +L+
Sbjct: 215 DAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLV 274

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +    +G  PN VT+NTL +G C +G   K + LL  M    C+P++++Y T++NGL+K 
Sbjct: 275 DNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQ 334

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G+      +   M   G+ V+E + + L+ GL  +        E+A ++F++   K    
Sbjct: 335 GRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKS-----EEAMRLFKESMDKGCKL 389

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +   Y  ++  L + +K DEA+  L    + G  P   TF+++++     G   KA+ + 
Sbjct: 390 NTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVW 449

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M +     +   Y +LI  L +  K  +A  ++   L  G  P
Sbjct: 450 KDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRP 494


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 178/359 (49%), Gaps = 5/359 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G AP+  ++S +I  YC   +  +  K+I  M   G  PN+ T+  ++  LCKSG++ +A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
             VL +M   G  P+   Y  L+ G C +G ++ AY++   ++   + PD   YTAV+ G
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            C+ G+  EA ++ N+   RGV P+ VT+ TL +GYCK G   K   L   M +    P+
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++Y+ L +GL K G++  A  +  EM   G +++    NSL+ GLC KS      +  A
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLC-KSGN----IRQA 239

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++ E+M       D  T+  ++    K  +  +A   L   ++ G  P  ITFN ++  
Sbjct: 240 VKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNG 299

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            C  G ++    LL  M E   +P+ T+Y+ L+ +            +Y     +GV+P
Sbjct: 300 FCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMP 358



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 180/366 (49%), Gaps = 5/366 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++    +FD ++K         +  ++  L    +   A K F++  S G+ P+  
Sbjct: 92  KLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEV 151

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  YC   +  +A  + + M  +G  PNV T+T L + LCK G++  A E+L +M
Sbjct: 152 TYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEM 211

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + NI TYN L+ GLC  G + +A +++  ++  G+ PD  T+T +MD +CK G  
Sbjct: 212 CGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEM 271

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A ELL E ++RG+ P V+TFN L NG+C  G    G  LL  M ++  +P+  +Y++L
Sbjct: 272 VKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSL 331

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +        +R    I+K M   G   D    N L++G C     +   +++A+ + ++M
Sbjct: 332 MKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHC-----KARNMKEAWFLHKEM 386

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K       +Y  +I+   K KK  EA          G       +N  +    GEG +
Sbjct: 387 AEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNM 446

Query: 422 DKALLL 427
           + AL L
Sbjct: 447 ETALEL 452



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 188/382 (49%), Gaps = 5/382 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
              L++ + +   ++  G   ++  +N +++ L    + + A +   E  + G+ P++  
Sbjct: 23  GGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVV 82

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  +C   +   A K+ D M      P+   +T ++  LC+ G++ EA +V ++M 
Sbjct: 83  YTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMF 142

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G +P+  TY  L+ G C  G +E+A+ +   +   GL P+V TYTA+ DG CK+G+ +
Sbjct: 143 SRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVD 202

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
            A ELL+E   +G+  N+ T+N+L NG CK G   + V L++ M+     PD I+++TL+
Sbjct: 203 TANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLM 262

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +   K G++  A  + +EM+  G +      N L+ G CM       +LED  ++   M 
Sbjct: 263 DAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG-----MLEDGERLLAWML 317

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +K  + +  TY  +++                     G +P + T+N +I+  C    + 
Sbjct: 318 EKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMK 377

Query: 423 KALLLLFLMYEHAKIPSRTSYD 444
           +A  L   M E     + +SY+
Sbjct: 378 EAWFLHKEMAEKGFNLTASSYN 399



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 110/247 (44%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   ++  +N L+  L        AVK   E    G+ P++ TF+ ++  YC   +  +A
Sbjct: 215 GLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKA 274

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            +++  M D G  P V TF +L+N  C SG L++   +L  M   G  PN  TYN L+K 
Sbjct: 275 HELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQ 334

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C    +    E+   +   G+ PD  TY  ++ G CK     EA  L  E  E+G    
Sbjct: 335 YCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLT 394

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
             ++N++  G+ K+    +   L + M++     D   Y+  ++     G +  A+ +  
Sbjct: 395 ASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCD 454

Query: 320 EMVRFGF 326
           E +   F
Sbjct: 455 EAIENCF 461



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 114/235 (48%), Gaps = 5/235 (2%)

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +K  G  PDV +Y+ V++G+C  G   + ++L+ E   +G+ PN+ T+N++    CK G 
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
                 +L+ M  +  +PD + Y+TL++G  K G I+ A  +F EM +     D     +
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           ++ GLC         + +A +VF KM  +    D  TY  +I    K  + ++A    + 
Sbjct: 121 VICGLCRCGK-----MMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQ 175

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            ++ G  P  +T+  +   LC  G++D A  LL  M       +  +Y+ L+  L
Sbjct: 176 MVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGL 230


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 197/389 (50%), Gaps = 5/389 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V   N+LL  L   ++   A+ FF +    GL+P+ +T++++I C   + D   AR + +
Sbjct: 216 VRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFE 275

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G  P++ T+  L++   K G L  A+ V ++M   GC+P++ TYN L+   C   
Sbjct: 276 EMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFE 335

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R+ +A+E L  +K  GL+P+V TY+ ++D FCK G   EA +   + I  G+ PN  T+ 
Sbjct: 336 RIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYT 395

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           +L +  CK G   +   L   M++     + ++Y+ LL+GL + G++R A  +F  +++ 
Sbjct: 396 SLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKA 455

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G+ +++++  SL  G     + +  ++E A  + E+M KK    D   YG  I  L +  
Sbjct: 456 GWTLNQQIYTSLFHG-----YIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQN 510

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + ++++  +   ++ G    +  +  +I A    GK  +A+ LL  M +     +  +Y 
Sbjct: 511 EIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYG 570

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
           +LI  L ++     A   +    + G+ P
Sbjct: 571 VLIDGLCKIGLVQQAVRYFDHMTRNGLQP 599



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 187/378 (49%), Gaps = 9/378 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ +K  G    +  +N L+     +     AV  F E    G  P+  T++ +I C+C
Sbjct: 273 LFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFC 332

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A + +  M   G  PNV T++ L+++ CK+G L EA +    M R+G +PN  
Sbjct: 333 KFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEF 392

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+   C +G + EA+++   ++  G+  ++ TYTA++DG C+ GR  EA EL    
Sbjct: 393 TYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGAL 452

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           ++ G T N   + +LF+GY K     K + +L+ M K+N  PD + Y T + GL +  +I
Sbjct: 453 LKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEI 512

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGL--CMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
             ++++ +EM+  G   +  +  +L+       K+ E  +LL++     + +  K++V  
Sbjct: 513 EDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQE----MQDLGIKITVV- 567

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TYG++I  L K     +A+ +  H    G  P  + +  +I  LC    +++A  L  
Sbjct: 568 --TYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFN 625

Query: 430 LMYEHAKIPSRTSYDMLI 447
            M +    P +  Y  LI
Sbjct: 626 EMLDKGISPDKLVYTSLI 643



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 190/448 (42%), Gaps = 44/448 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   + +F+ +K  G    V  +N L+           A ++       GL PN  
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  +C      EA K    M   G  PN  T+T L+++ CK G L EA ++  +M
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM 417

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML---------------------------- 213
            + G   NI TY  LL GLC  GR+ EA E+                             
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMM 477

Query: 214 ---------MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
                    MN KN  LKPD+  Y   + G C+     ++M ++ E ++ G+T N   + 
Sbjct: 478 EKAMDILEEMNKKN--LKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYT 535

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL + Y K G   + V LL+ M+        ++Y  L++GL K G ++ AV  F  M R 
Sbjct: 536 TLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRN 595

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G + +  +  +L+ GLC     + D LE+A  +F +M  K    D   Y  +I    K  
Sbjct: 596 GLQPNIMIYTALIDGLC-----KNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHG 650

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
              EAL   +  +E+G       + ++I      G++  A  LL  M     IP +    
Sbjct: 651 NPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCI 710

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVI 472
            L+ K  +L    +A AL+    ++G+I
Sbjct: 711 CLLRKYYELGDINEALALHDDMARRGLI 738



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 160/312 (51%), Gaps = 7/312 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E  ++F ++ K G   +   +  L    +     E A+    E +   L P+   +  
Sbjct: 442 MREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGT 501

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            I   C +N+  ++  VI  M D G   N   +T L+++  K G+  EA+ +L +M  +G
Sbjct: 502 KIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLG 561

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            K  + TY  L+ GLC +G V++A     ++  +GL+P++  YTA++DG CK     EA 
Sbjct: 562 IKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAK 621

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L NE +++G++P+ + + +L +G  K G P + + L   M +     D  +Y++L+ G 
Sbjct: 622 NLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGF 681

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            ++G+++ A S+  EM+R G   D+ +   LLR    K +E  D + +A  + + M ++ 
Sbjct: 682 SRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLR----KYYELGD-INEALALHDDMARRG 736

Query: 366 SVTDPGTYGIVI 377
            ++  GT  I +
Sbjct: 737 LIS--GTIDITV 746



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 131/270 (48%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           F   IKA  +++ +DI + + K      +  +   +  L   NE E ++    E    GL
Sbjct: 468 FHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGL 527

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
             NS+ ++ +I  Y       EA  ++  M D G    V T+ +L++ LCK G +++A+ 
Sbjct: 528 TANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVR 587

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
             D M R G +PNI  Y  L+ GLC    +EEA  +   + + G+ PD   YT+++DG  
Sbjct: 588 YFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNM 647

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G   EA+ L N  +E G+  ++  + +L  G+ + G       LL  M ++  +PD++
Sbjct: 648 KHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQV 707

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
               LL    + G I  A+++  +M R G 
Sbjct: 708 LCICLLRKYYELGDINEALALHDDMARRGL 737



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 162/371 (43%), Gaps = 27/371 (7%)

Query: 76  IKKDGTNWSVSDFNDLLM--ALVML-NEQETAVKFFSEASS-YGLAPNSWTFSIMIRCYC 131
           +++DG + S S    + +  ALV L  + ++A+KFF EA +  G    + ++ ++     
Sbjct: 80  LQQDGPHLSDSALAPIWVSKALVKLKGDPKSALKFFKEAGARAGFRHAAESYCVLAHILF 139

Query: 132 NKNDFFEARKVID-----------C-MFD------NGYHPNVTTFTILVNSLCKSGRLKE 173
               + +AR VI            C  FD      N   P    F  L N L   G L+E
Sbjct: 140 CGMFYLDARSVIKEWILLGREFPGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEE 199

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A +   +M +    P +++ N LL  L    +   A     ++   GL P V+TY  V+ 
Sbjct: 200 ARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIG 259

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
              + G    A  L  E   +G+ P++VT+N+L +GY K G     V + + MK   C P
Sbjct: 260 CLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEP 319

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D I+Y++L+N   K+ +I  A      M + G + +    ++L+   C     +  +L +
Sbjct: 320 DVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFC-----KAGMLLE 374

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A + F  M +     +  TY  +I    K    +EA        + G     +T+  ++ 
Sbjct: 375 ANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLD 434

Query: 414 ALCGEGKIDKA 424
            LC +G++ +A
Sbjct: 435 GLCEDGRMREA 445



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 94/201 (46%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            K     E +++   ++  G   +V  +  L+  L  +   + AV++F   +  GL PN 
Sbjct: 542 FKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNI 601

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             ++ +I   C  +   EA+ + + M D G  P+   +T L++   K G   EAL + ++
Sbjct: 602 MIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNR 661

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M  IG + ++  Y  L+ G    G+V+ A  +L  +   G+ PD      ++  + ++G 
Sbjct: 662 MVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGD 721

Query: 241 SNEAMELLNEAIERGVTPNVV 261
            NEA+ L ++   RG+    +
Sbjct: 722 INEALALHDDMARRGLISGTI 742


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 198/413 (47%), Gaps = 6/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA   +E   +FD     G   ++  +N ++  L    + + A        + G+ PN 
Sbjct: 446 LKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNV 504

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++ MI  +C K +   A  V   M      PNV T++IL++   K G  ++AL++ DQ
Sbjct: 505 VSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQ 564

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M  +   P   T+N ++ GLC VG++ EA + L N   +G  P   TY +++DGF K G 
Sbjct: 565 MLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGN 624

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A+ +  E  E GV+PNVVT+ +L NG+CK       +     M+++    D  +YS 
Sbjct: 625 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSA 684

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G  K   +  A  +F E++  G   +  + NS++ G     + + + +E A   ++K
Sbjct: 685 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG-----FRDLNNMEAALVWYKK 739

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M       D GTY  +I  L K  +   A       +  G +P  ITF+ ++  LC +G+
Sbjct: 740 MINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQ 799

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++ A  +L  M      PS   Y+ LI    +     +A  L+   L +G++P
Sbjct: 800 LENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVP 852



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 220/457 (48%), Gaps = 16/457 (3%)

Query: 26  FNKLVVFAAASLSTAESLDLKEN------PRSLQAQRFVDR--IKASPLKERIDIFDSIK 77
           F  ++V   A  +  E+L LKE       P +L     + +       L   +++F+ I 
Sbjct: 333 FTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKIT 392

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           +DG   +   ++ L+         E A + +++    G+ P+ +  + ++R Y     + 
Sbjct: 393 EDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWE 452

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA K+ D   D G   N+ T+ I+++ LCK G++ EA  +LD M   G  PN+ +YN ++
Sbjct: 453 EASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMI 511

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G C  G ++ A  +  ++    LKP+V TY+ ++DG  K G S +A++L ++ +   + 
Sbjct: 512 LGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIA 571

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P   TFNT+ NG CK G   +    LK   +   +P  ++Y+++++G +K G I  A+++
Sbjct: 572 PTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAV 631

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           ++EM  FG   +     SL+ G C     + + ++ A +  ++M +K    D   Y  +I
Sbjct: 632 YREMCEFGVSPNVVTYTSLINGFC-----KSNRIDLALKTRDEMREKGLELDVTAYSALI 686

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               K +  + A       +E+G  P  I +N++I        ++ AL+    M  + +I
Sbjct: 687 DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI-NDRI 745

Query: 438 PSRT-SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P    +Y  LI  L +  +   A  LY   L +G++P
Sbjct: 746 PCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 782



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 188/406 (46%), Gaps = 6/406 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ + +K+ G   S + F  +++A V       A++   E  + G   N    + +++ 
Sbjct: 315 LELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKG 374

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC + +   A  + + + ++G  PN  T+++L+   C SG +++A E+  QM   G  P+
Sbjct: 375 YCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPS 434

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           +   N LL+G       EEA ++     + G+  +++TY  +M   CK G+ +EA  LL+
Sbjct: 435 VFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLD 493

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             + +G+ PNVV++N +  G+C++G       +   M  R+  P+ ++YS L++G  K G
Sbjct: 494 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKG 553

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
               A+ +F +M+       +   N+++ GLC     +   + +A    +   ++  +  
Sbjct: 554 DSEKALDLFDQMLSLNIAPTDFTFNTIINGLC-----KVGQMSEARDKLKNFLEEGFIPS 608

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  ++    K    D AL       E G  P  +T+ ++I   C   +ID AL    
Sbjct: 609 CMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRD 668

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            M E       T+Y  LI    +      A  L+   L+ G+ P R
Sbjct: 669 EMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNR 714



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 6/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN LL A +  N  E A+  F+      + P     +I++     +N   E R + + M 
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 252

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G + +  T  ++V +  K GR++EA E   +    G K +   Y+ +++ +C      
Sbjct: 253 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 312

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
              E+L  +K  G  P   T+T+V+      G   EA+ L  E I  G   N+V   +L 
Sbjct: 313 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 372

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            GYC +G     + L   + +    P+K++YS L+ G    G I  A  ++ +M   G  
Sbjct: 373 KGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 432

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                +NSLLRG     + +  L E+A ++F++      V +  TY I++  L KG K D
Sbjct: 433 PSVFNVNSLLRG-----YLKAPLWEEASKLFDEAV-DCGVANIFTYNIMMSWLCKGGKMD 486

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA   L + +  G +P  +++N++I   C +G +D A  +   M      P+  +Y +LI
Sbjct: 487 EACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILI 546

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +   S  A  L+   L   + P
Sbjct: 547 DGNFKKGDSEKALDLFDQMLSLNIAP 572



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 173/381 (45%), Gaps = 41/381 (10%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A ++F E    G+  ++  +SI+I+  C K +     ++++ M + G+ P+  TFT +
Sbjct: 277 EEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSV 336

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + +    G + EAL + ++M   G   N+     L+KG C  G ++ A  +   +  DGL
Sbjct: 337 IVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGL 396

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY----------- 270
            P+  TY+ +++G C  G   +A EL  +    G+ P+V   N+L  GY           
Sbjct: 397 FPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASK 456

Query: 271 -----------------------CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
                                  CK G   +   LL  M  +  +P+ +SY+ ++ G  +
Sbjct: 457 LFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCR 516

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM-TKKVS 366
            G +  A S+F +M+    + +    + L+ G   K   EK     A  +F++M +  ++
Sbjct: 517 KGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK-----ALDLFDQMLSLNIA 571

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
            TD  T+  +I  L K  +  EA   L + +E G IP  +T+N+++     EG ID AL 
Sbjct: 572 PTD-FTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 630

Query: 427 LLFLMYEHAKIPSRTSYDMLI 447
           +   M E    P+  +Y  LI
Sbjct: 631 VYREMCEFGVSPNVVTYTSLI 651



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 139/278 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  D   +  ++G   S   +N ++   +     ++A+  + E   +G++PN  
Sbjct: 586 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVV 645

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C  N    A K  D M + G   +VT ++ L++  CK   ++ A ++  ++
Sbjct: 646 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 705

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G  PN   YN ++ G   +  +E A      + ND +  D+ TYT ++DG  K GR 
Sbjct: 706 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 765

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A +L  E + +G+ P+++TF+ L NG C +G       +L+ M ++N  P  + Y+TL
Sbjct: 766 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 825

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + G  + G ++ A ++  EM+  G   D+   + L+ G
Sbjct: 826 IAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 147/341 (43%), Gaps = 41/341 (12%)

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           +I+C     +  +   F  L+N+  ++ R++ A++  + M      P +   N LL  L 
Sbjct: 177 LINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALV 236

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
               + E  ++   +   G+  D +T   ++    K GR  EA E   E  ERGV  +  
Sbjct: 237 RRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAG 296

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            ++ +    CK+     G+ LL+ MK+R  +P + ++++++   +  G +  A+ + +EM
Sbjct: 297 AYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEM 356

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +  G  ++  +  SL++G C +       L+ A  +F K+T+     +  TY ++I    
Sbjct: 357 INCGKPMNLVVATSLMKGYCAQGN-----LDSALNLFNKITEDGLFPNKVTYSVLIEGCC 411

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTI----------------------------------- 406
                ++A   L+  +++  IP ++                                   
Sbjct: 412 NSGNIEKA-SELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIF 470

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           T+N ++  LC  GK+D+A  LL  M     +P+  SY+ +I
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMI 511


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 188/422 (44%), Gaps = 42/422 (9%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  FN +L +   +    TAV         G+ P+  T +I+I C+C+         V+ 
Sbjct: 59  IIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM----------------------- 181
            +   GY P+  TFT L+  LC  G++ +AL   D++                       
Sbjct: 119 KILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIG 178

Query: 182 -------------GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
                        GR+  KPN++ YN ++  LC    V EAY +   +   G+  DV TY
Sbjct: 179 DTRGAIKLVRKIDGRL-TKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTY 237

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           T ++ GFC   +  EA+ LLNE + + + PNV T+N L +  CKEG   +   +L +M K
Sbjct: 238 TTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLK 297

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
               PD I+YSTL++G     +++ A  +F  M   G   D      L+ G C     + 
Sbjct: 298 ACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFC-----KN 352

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
            ++++A  +F++M +K  V    TY  +I  L K  +       +    + G     IT+
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITY 412

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           N++I  LC  G +D+A+ L   M +    P   ++ +L+  L +  +  DA   +   L 
Sbjct: 413 NSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLT 472

Query: 469 QG 470
           +G
Sbjct: 473 KG 474



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 190/398 (47%), Gaps = 9/398 (2%)

Query: 57  FVDRIKASPLKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
           F   IK   LK +++      D +   G  +    +  L+  +  + +   A+K   +  
Sbjct: 132 FTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKID 191

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
                PN   ++ +I   C      EA  +   M   G   +V T+T L+   C + +LK
Sbjct: 192 GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLK 251

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           EA+ +L++M      PN+ TYN L+  LC  G+V+EA  +L  +    +KPDV TY+ +M
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLM 311

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           DG+  V    +A  + N     GVTP+V ++  L NG+CK     + + L K M ++N +
Sbjct: 312 DGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P  ++YS+L++GL K G+I     +  EM   G   +    NSL+ GLC         L+
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGH-----LD 426

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A  +F KM  +       T+ I++  L KG +  +A       +  G+      +N +I
Sbjct: 427 RAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMI 486

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              C +G +++AL +L  M E+  +P+  ++D++I  L
Sbjct: 487 NGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINAL 524



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 187/354 (52%), Gaps = 7/354 (1%)

Query: 77  KKDG--TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           K DG  T  +V  +N ++ AL        A   FSE ++ G++ +  T++ +I  +C  +
Sbjct: 189 KIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIAS 248

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
              EA  +++ M     +PNV T+ ILV++LCK G++KEA  VL  M +   KP++ TY+
Sbjct: 249 KLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYS 308

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+ G   V  +++A  +   +   G+ PDV++YT +++GFCK    +EA+ L  E  ++
Sbjct: 309 TLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
            + P +VT+++L +G CK G       L+  M+ R    + I+Y++L++GL K G +  A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRA 428

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           +++F +M   G          LL GLC     +   L+DA + F+ +  K    D   Y 
Sbjct: 429 IALFNKMKDQGIRPCSFTFTILLDGLC-----KGGRLKDAQEAFQDLLTKGYHLDVYKYN 483

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           ++I    K    +EAL  L    E G +P  +TF+ +I AL  + + DKA  LL
Sbjct: 484 VMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLL 537



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 168/328 (51%), Gaps = 5/328 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   +F  +   G +  V  +  L+    + ++ + A+   +E     + PN +
Sbjct: 211 KYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVY 270

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I++   C +    EA+ V+  M      P+V T++ L++       LK+A  V + M
Sbjct: 271 TYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAM 330

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G  P++ +Y  L+ G C    V+EA  +   +    + P + TY++++DG CK GR 
Sbjct: 331 SLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +   +L++E  +RG+  NV+T+N+L +G CK G   + + L   MK +   P   +++ L
Sbjct: 391 SYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTIL 450

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+GL K G+++ A   F++++  G+ +D    N ++ G C     ++ LLE+A  +  KM
Sbjct: 451 LDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHC-----KQGLLEEALTMLSKM 505

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
            +   V +  T+ I+I  L K  + D+A
Sbjct: 506 EENGCVPNAVTFDIIINALFKKDENDKA 533



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 144/280 (51%), Gaps = 1/280 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        VD + K   +KE  ++   + K      V  ++ L+    ++ E + A  
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQH 325

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F+  S  G+ P+  +++I+I  +C      EA  +   M      P + T++ L++ LC
Sbjct: 326 VFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC 385

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSGR+    +++D+M   G   N+ TYN L+ GLC  G ++ A  +   +K+ G++P  +
Sbjct: 386 KSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSF 445

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+T ++DG CK GR  +A E   + + +G   +V  +N + NG+CK+G   + + +L  M
Sbjct: 446 TFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKM 505

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
           ++  C+P+ +++  ++N L K  +   A  + ++M+  G 
Sbjct: 506 EENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 142/300 (47%), Gaps = 14/300 (4%)

Query: 176 EVLDQMGRIGC---KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           + + Q  R+ C    P I  +N +L     +     A  +   ++  G++PD+ T   ++
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           + FC +G+      +L + ++RG  P+ +TF TL  G C +G   K +     +  +   
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIK 161

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            D++SY TL+NG+ K G  R A+ + +++     + +  M N+++  LC     +  L+ 
Sbjct: 162 FDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALC-----KYQLVS 216

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +AY +F +MT K    D  TY  +I       K  EA+  L+  +     P   T+N ++
Sbjct: 217 EAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYD------MLITKLDQLEKSYDACALYGAA 466
            ALC EGK+ +A  +L +M +    P   +Y        L+ +L + +  ++A +L G  
Sbjct: 277 DALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVT 336


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 182/357 (50%), Gaps = 8/357 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK---FFSEASSYGLAPNSWT 122
           L++  D+   IK  G   SV+ +N L+                    E    G++P + T
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVT 266

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           F ++I  YC  ++   A +V + M   G   +V T+  L++ LC  G+++E ++++++M 
Sbjct: 267 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
            +G  PN  T+ C+LKG C  G + +A + +  +    ++PDV  YT ++DG+ ++G+  
Sbjct: 327 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKME 386

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +AM +     ++G++PNV T+N L  G+ + G      GLL  MK++    D ++Y+ L+
Sbjct: 387 DAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
             L   G++R AV +  EM   G E +    N++++G C     +K  ++ AY++  +M 
Sbjct: 447 GALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFC-----DKGNIKSAYEIRTRME 501

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           K     +  TY + I+   +  K DEA   L+  ++   +P  IT+  + + +  +G
Sbjct: 502 KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 197/436 (45%), Gaps = 48/436 (11%)

Query: 46  KENPRSLQAQRFVDRIKASPL-KERIDI----FDSIKKDGTNWSVSDFNDLLMALVMLNE 100
           + +PR   +   V+ + A  +  +R+D+    F S  +   +  +  FN ++  L  + +
Sbjct: 147 ESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206

Query: 101 QETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN---DFFEARKVIDCMFDNGYHPNVTT 157
              A     +  ++GLAP+  T++ +I  YC K    + +    ++  M + G  P   T
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVT 266

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F +L+N  CK+     A+ V ++M + G   ++ TYN L+ GLC  G+VEE  +++  ++
Sbjct: 267 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           + GL P+  T+  V+ GFCK G   +A + ++   ER V P+VV +  L +GY + G   
Sbjct: 327 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKME 386

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
             + + + M K+   P+  +Y+ L+ G  + G  R A  +  EM   G E D    N L+
Sbjct: 387 DAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
             LC K    K     A ++ ++M+                                   
Sbjct: 447 GALCCKGEVRK-----AVKLLDEMS----------------------------------- 466

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
           E+G  P  +T+N +IQ  C +G I  A  +   M +  K  +  +Y++ I    Q+ K  
Sbjct: 467 EVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMD 526

Query: 458 DACALYGAALKQGVIP 473
           +A  L    L + ++P
Sbjct: 527 EANDLLNEMLDKCLVP 542



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 115/207 (55%), Gaps = 1/207 (0%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D  D + +      V  +  L+     L + E A+      +  G++PN  T++ +I  +
Sbjct: 355 DWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
               D+  A  ++D M + G   +V T+ +L+ +LC  G +++A+++LD+M  +G +PN 
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNH 474

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN +++G C  G ++ AYE+   ++    + +V TY   +  FC++G+ +EA +LLNE
Sbjct: 475 LTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNE 534

Query: 251 AIERGVTPNVVTFNTLFNGYCKEG-TP 276
            +++ + PN +T+ T+  G  ++G TP
Sbjct: 535 MLDKCLVPNGITYETIKEGMMEKGYTP 561


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 188/396 (47%), Gaps = 9/396 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ +F  +L +LV  N     V    +    GLA N  T SI+I CY        +  V 
Sbjct: 11  SIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVF 70

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   GY  +  TFT L+  LC  G + +AL   D++   G K N  +Y  L+ GLC V
Sbjct: 71  ANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKV 130

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G+   A E L  +    ++PDV  Y  ++DG CK    N+A  L  E + + + P+VVT+
Sbjct: 131 GQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTY 190

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           NTL  G C        +GLL  M   +  P   ++S L++   K GK++ A ++F  M++
Sbjct: 191 NTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMK 250

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEK---------DLLEDAYQVFEKMTKKVSVTDPGTYG 374
              + +    NSL+ G  + +  +K          ++++A  +FE+M  K    D   Y 
Sbjct: 251 EDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYN 310

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            +I  L K  +T  AL  +      G  P   T+N+++ ALC    +DKA+ LL  + + 
Sbjct: 311 SLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQ 370

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
              PS  +Y++LI  L +  +  DA  ++   L +G
Sbjct: 371 GIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKG 406



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 147/300 (49%), Gaps = 19/300 (6%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   + E  +  + P+  T++ +I   C      +A  ++  M     +P V TF+IL++
Sbjct: 171 AFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILID 230

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG--------------RVEEA 209
           + CK G++KEA  V   M +   KPNI TYN L+ G   V                V+EA
Sbjct: 231 AFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEA 290

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             +   +    + PD+  Y +++DG CK GR+  A++ + E   RG  P++ T+N+L + 
Sbjct: 291 MNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDA 350

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            CK     K + LL  +K +   P   +Y+ L+NGL K G+++ A  +F++++  G+  D
Sbjct: 351 LCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTD 410

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N++++G C     +K L ++   +  KM       D     I+IR+L    + D+A
Sbjct: 411 VYTYNAMIKGFC-----KKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKA 465



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 172/397 (43%), Gaps = 44/397 (11%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F +I K G       F  L+  L +  E   A+ F  +  + G   N  ++  +I   C
Sbjct: 69  VFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLC 128

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A + +  +      P+V  +  +++ LCK   + +A  +  +M      P++ 
Sbjct: 129 KVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVV 188

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ GLC + ++++A  +L  +  + + P VYT++ ++D FCK G+  EA  +    
Sbjct: 189 TYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVM 248

Query: 252 IERGVTPNVVTFNTLFNGY-----CKEGTPM---------KGVGLLKLMKKRNCLPDKIS 297
           ++  V PN+VT+N+L +G+      K+   +         + + L + M  +   PD + 
Sbjct: 249 MKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVI 308

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL------- 350
           Y++L++GL K G+   A+    EM   G   D    NSLL  LC     +K +       
Sbjct: 309 YNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLK 368

Query: 351 -----------------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                                  L+DA +VFE +  K   TD  TY  +I+   K    D
Sbjct: 369 DQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFD 428

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           E L  +    + G  P       +I++L  +G+ DKA
Sbjct: 429 ETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKA 465



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 129/291 (44%), Gaps = 50/291 (17%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV  +N L+  L ++ + + A+    +     + P  +TFSI+I  +C +    EA+ V 
Sbjct: 186 SVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVF 245

Query: 144 DCMFDNGYHPNVTTFTIL------------------------------------------ 161
             M      PN+ T+  L                                          
Sbjct: 246 AVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPD 305

Query: 162 -------VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
                  ++ LCKSGR   AL+ + +M   G  P+I TYN LL  LC    V++A E+L 
Sbjct: 306 MVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLT 365

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            +K+ G++P V TY  +++G CK GR  +A ++  + + +G   +V T+N +  G+CK+G
Sbjct: 366 KLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKG 425

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
              + + ++  MK   C PD  +   ++  L   G+   A   F+EM+  G
Sbjct: 426 LFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKA-GKFREMIVRG 475



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 114/227 (50%), Gaps = 15/227 (6%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDL-----LMALV----- 96
           NP        +D   K   +KE  ++F  + K+    ++  +N L     L+ +V     
Sbjct: 219 NPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKS 278

Query: 97  ----MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
               M+   + A+  F E     + P+   ++ +I   C       A K I  M   G  
Sbjct: 279 IFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQP 338

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++ T+  L+++LCK+  + +A+E+L ++   G +P++ TYN L+ GLC  GR+++A ++
Sbjct: 339 PDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKV 398

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
             ++   G   DVYTY A++ GFCK G  +E + ++++  + G +P+
Sbjct: 399 FEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPD 445



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/374 (23%), Positives = 151/374 (40%), Gaps = 60/374 (16%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  F  ++ SL K+      + +  QM   G   N+ T + L+     +G+   ++ +
Sbjct: 10  PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
             N+   G   D  T+T ++ G C  G  ++A+   ++ + +G   N V++ TL NG CK
Sbjct: 70  FANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCK 129

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     +  L+ +  +   PD + Y+T+++GL K   +  A +++ EMV          
Sbjct: 130 VGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVT 189

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA--- 389
            N+L+ GLC+ +      L+DA  +  KM  +       T+ I+I    K  K  EA   
Sbjct: 190 YNTLICGLCIMAQ-----LKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNV 244

Query: 390 ------------------LIHLHHAI------------------------EMGHI----P 403
                             L+  HH +                        E  H     P
Sbjct: 245 FAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYP 304

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD---AC 460
             + +N++I  LC  G+   AL  +  M+   + P   +Y+ L   LD L K+Y    A 
Sbjct: 305 DMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSL---LDALCKNYHVDKAI 361

Query: 461 ALYGAALKQGVIPQ 474
            L      QG+ P 
Sbjct: 362 ELLTKLKDQGIQPS 375



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 117/262 (44%), Gaps = 7/262 (2%)

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           ML++ KN    P ++ +  ++    K    +  + L  +    G+  N+VT + L N Y 
Sbjct: 1   MLLHHKNP--TPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYS 58

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           + G       +   + K+    D I+++TL+ GL   G+I  A+    ++V  GF++++ 
Sbjct: 59  QLGQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQV 118

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
              +L+ GLC K  + +  LE       ++  K+   D   Y  +I  L K K  ++A  
Sbjct: 119 SYGTLINGLC-KVGQTRAALE----FLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFN 173

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
                +     P  +T+N +I  LC   ++  A+ LL  M      P+  ++ +LI    
Sbjct: 174 LYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFC 233

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           +  K  +A  ++   +K+ V P
Sbjct: 234 KEGKMKEAKNVFAVMMKEDVKP 255


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 180/346 (52%), Gaps = 14/346 (4%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVTTFTILVNSLCKSGRLKEALEV 177
           +++T+ +++R +C   +   A  ++  M    G  P  + +   V++LCKSG++ EA+EV
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           +  M    CKP++ T+N L+ GLC  GR++EA ++L  ++  G   ++ TY  +++G   
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKI 296
            GRS EA+ ++        TP+  T+N + +G+CK G   +  G L+ MK+R  C PD  
Sbjct: 137 AGRSGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMV-RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           +YS L+NGL K   +R A  + +EM+ R          N+L+ G C    + +D L+ A 
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYC----KAQD-LDRAR 248

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++   M +     D  TY  +I  L +    D+    L   +  G  P  +T+  ++  L
Sbjct: 249 ELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGL 308

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDML---ITKLDQLEKSYD 458
           C  GK+ +A  L+  M E    P+  +Y ++   + K+D+L+ + D
Sbjct: 309 CKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMAND 354



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 174/360 (48%), Gaps = 11/360 (3%)

Query: 91  LLMALVMLNEQETAVKFFSEASSY-GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
           L+ A  +  E + A+    E     G+AP    ++  +   C      EA +V+  M D 
Sbjct: 24  LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
              P+V TF  L+  LCK+GRL EA +VLD+M R G   N+ TYN L+ GL   GR  EA
Sbjct: 84  ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-GVTPNVVTFNTLFN 268
             ++  +      PD  TY A++ GFCK G  + A   L E  +R G +P+  T++ L N
Sbjct: 144 VLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200

Query: 269 GYCKEGTPMKGVGLLK-LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           G CK     K   LL+ ++ +++C    ++++TL++G  K   +  A  +   M+  G  
Sbjct: 201 GLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCA 260

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    ++++ GLC     +K      + + EKM  +    D  TY +++  L K  K  
Sbjct: 261 PDVVTYSTIIDGLCRCGDVDK-----GFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMV 315

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA   +   +E G  P  +T++ V   LC   K+D A  LL  + +  +I    +++ L+
Sbjct: 316 EACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 171/353 (48%), Gaps = 11/353 (3%)

Query: 63  ASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           A  L+  +D+   +++  G   + S +N  + AL    +   A++           P+  
Sbjct: 31  AGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVV 90

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C      EA++V+D M  +G+  N+ T+  L+N L  +GR  EA+ V+  M
Sbjct: 91  TFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGM 150

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGR 240
                 P+ QTYN ++ G C  G ++ AY  L  +K   G  PD +TY+ +++G CK   
Sbjct: 151 TTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN 207

Query: 241 SNEAMELLNEAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
             +A ELL E I R     +VV FNTL +GYCK     +   LL  M +  C PD ++YS
Sbjct: 208 LRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYS 267

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           T+++GL + G +    ++ ++MV  G + D      L+ GLC     +   + +A ++ +
Sbjct: 268 TIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLC-----KAGKMVEACRLVK 322

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +M +     +  TY +V   L K  K D A   L    + G I   + F  ++
Sbjct: 323 RMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 140/278 (50%), Gaps = 5/278 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E   + D +++ G   ++  +N L+  L        AV      ++    P++ 
Sbjct: 101 KAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQ 157

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T++ +I  +C   +   A   ++ M    G  P+  T++IL+N LCKS  L++A E+L +
Sbjct: 158 TYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQE 217

Query: 181 M-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           M GR  C  ++  +N L+ G C    ++ A E+L ++   G  PDV TY+ ++DG C+ G
Sbjct: 218 MIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCG 277

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
             ++   LL + + RG  P+VVT+  L  G CK G  ++   L+K M +  C P+ ++YS
Sbjct: 278 DVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYS 337

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
            + +GL K  K+  A  +   +   G   D     +LL
Sbjct: 338 LVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 196/385 (50%), Gaps = 7/385 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+ D + +DG  +    FN L+ A       + A+  F+E    GL P+  ++S +I   
Sbjct: 361 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 420

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A    + M   G  PN+ +FT L++ LC  G  K+  E+  +M   G  P+ 
Sbjct: 421 CKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDA 480

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
              N ++  LC  GRV EA +    V + G+KPDV +Y  ++DG+C VG+ +E+++ L+ 
Sbjct: 481 IFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDR 540

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G+ P+  T+N+L NGY K G     + L + M +++     I+ + +L+GL + G+
Sbjct: 541 MVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGR 600

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I  A  ++ +MV  G ++     N++L GLC     E   +++A ++FE +  K    D 
Sbjct: 601 IVAARELYMKMVDRGTQLRIETYNTVLGGLC-----ENSCVDEALRMFEDLRSKEFELDV 655

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            T+ IVI  L K  + DEA       +  G +P  IT++ +I++   EG ++++  L   
Sbjct: 656 RTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLS 715

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEK 455
           M ++         ++++ +L  LEK
Sbjct: 716 MEKNGCAADSHMLNIIVRRL--LEK 738



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 200/443 (45%), Gaps = 32/443 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + + + I   +   G       +N ++     L + E AV+   + S  GL P+  
Sbjct: 247 KAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 306

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S++I+ YC      EAR V D M   G  PN T + IL++     G L +  ++LD M
Sbjct: 307 TYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G     + +N L+      G V++A      ++ +GL+PDV +Y+ V+   CK GR 
Sbjct: 367 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRV 426

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+   N+ +  G++PN+++F +L +G C  G   K   L   M  R   PD I  +T+
Sbjct: 427 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 486

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM------------------- 342
           ++ L K G++  A   F  ++  G + D    N+L+ G C                    
Sbjct: 487 MDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGL 546

Query: 343 --KSWEEKDLL---------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
              SW    LL         EDA  ++ +M +K       T  I++  L +  +   A  
Sbjct: 547 RPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARE 606

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF-LMYEHAKIPSRTSYDMLITKL 450
                ++ G   R  T+N V+  LC    +D+AL +   L  +  ++  RT + ++I  L
Sbjct: 607 LYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRT-FSIVINAL 665

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            ++ +  +A +L+ A + +G +P
Sbjct: 666 LKVGRIDEAKSLFSAMVLRGPVP 688



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 202/439 (46%), Gaps = 45/439 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS---YGLAPNSWTFSIMIR 128
           +F  + + G    V  +N L+  L +  + + A++     ++   Y  +PN  +++ +I 
Sbjct: 149 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVID 208

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
            +  + +  +A  +   M   G  P+V T+  L++ LCK+  + +A+ +L  M   G  P
Sbjct: 209 GFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMP 268

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           + +TYN +++G C +G++EEA  +L  +   GL+PDV TY+ ++  +CK+GR  EA  + 
Sbjct: 269 DTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVF 328

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM---------------------- 286
           +  + +G  PN   ++ L +GY  +G  +    LL LM                      
Sbjct: 329 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKH 388

Query: 287 -------------KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
                        ++    PD +SYST+++ L K G++  AV  F +MV  G   +    
Sbjct: 389 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISF 448

Query: 334 NSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            SL+ GLC +  W++ + L      FE + + +   D      ++  L K  +  EA   
Sbjct: 449 TSLIHGLCSIGEWKKVEEL-----AFEMINRGIH-PDAIFMNTIMDNLCKEGRVVEAQDF 502

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
               I +G  P  +++N +I   C  GK+D+++  L  M      P   +Y+ L+    +
Sbjct: 503 FDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFK 562

Query: 453 LEKSYDACALYGAALKQGV 471
             +  DA ALY    ++ V
Sbjct: 563 NGRVEDALALYREMFRKDV 581



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 209/501 (41%), Gaps = 79/501 (15%)

Query: 52  LQAQRFV-DRIKASPL--KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET----- 103
           L+ +R + +R ++  L  ++ +++FD +       SV  FN +L  +   +   +     
Sbjct: 13  LELERIILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSA 72

Query: 104 --AVKFFSEASSYGLAPNSWTFSIMIRCYCNKN--------------------------- 134
             AV  F+     G+   +    I+IRC+C                              
Sbjct: 73  ALAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQL 132

Query: 135 -----DFFEARKVIDCMF----DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM---G 182
                D       +D +F    + GY P+V ++  L+  LC   + +EALE+L  M   G
Sbjct: 133 IKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADG 192

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              C PN+ +YN ++ G    G V++AY +   +   GL PDV TY +++DG CK    +
Sbjct: 193 GYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMD 252

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +A+ +L    ++GV P+  T+N +  GYC  G   + V LLK M      PD ++YS L+
Sbjct: 253 KAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLI 312

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW--EEKDLL--------- 351
               K G+   A S+F  MVR G + +  + + LL G   K    + +DLL         
Sbjct: 313 QYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIP 372

Query: 352 -------------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
                              + A   F +M +     D  +Y  VI  L K  + ++A+ H
Sbjct: 373 FEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYH 432

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            +  +  G  P  I+F ++I  LC  G+  K   L F M      P     + ++  L +
Sbjct: 433 FNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCK 492

Query: 453 LEKSYDACALYGAALKQGVIP 473
             +  +A   +   +  GV P
Sbjct: 493 EGRVVEAQDFFDMVIHIGVKP 513



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 1/298 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  D FD +   G    V  +N L+     + + + ++K      S GL P+SW
Sbjct: 492 KEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSW 551

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  Y       +A  +   MF         T  I+++ L ++GR+  A E+  +M
Sbjct: 552 TYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKM 611

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +  I+TYN +L GLC    V+EA  M  ++++   + DV T++ V++   KVGR 
Sbjct: 612 VDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRI 671

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA  L +  + RG  P+V+T++ +   + +EG   +   L   M+K  C  D    + +
Sbjct: 672 DEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNII 731

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE-EKDLLEDAYQVF 358
           +  LL+ G +R A +   ++    F ++      L+  +  K ++ E   L + Y  F
Sbjct: 732 VRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIPIVSEKKYQKEVKFLPEKYHSF 789



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 17/250 (6%)

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK-------GVGLLKLMKKRN 290
           +GR  +A+ L +E + +    +V  FN++     +  +           V L   M +  
Sbjct: 28  LGRE-DALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSG 86

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
                     L+      G++  A + F   ++ G+ V    +N L++GLC     + + 
Sbjct: 87  VNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLC-----DGNR 141

Query: 351 LEDAYQ-VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI---PRTI 406
            +DA   VF +M +     D  +Y  +I+ L   KK+ EAL  L H    G     P  +
Sbjct: 142 TDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVV 201

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           ++N VI     EG++DKA  L   M      P   +Y+ LI  L + +    A A+    
Sbjct: 202 SYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHM 261

Query: 467 LKQGVIPQRK 476
             +GV+P  +
Sbjct: 262 FDKGVMPDTR 271


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 180/346 (52%), Gaps = 14/346 (4%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVTTFTILVNSLCKSGRLKEALEV 177
           +++T+ +++R +C   +   A  ++  M    G  P  + +   V++LCKSG++ EA+EV
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           +  M    CKP++ T+N L+ GLC  GR++EA ++L  ++  G   ++ TY  +++G   
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKI 296
            GRS EA+ ++        TP+  T+N + +G+CK G   +  G L+ MK+R  C PD  
Sbjct: 137 AGRSGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMV-RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           +YS L+NGL K   +R A  + +EM+ R          N+L+ G C    + +D L+ A 
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYC----KAQD-LDRAR 248

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++   M +     D  TY  +I  L +    D+    L   +  G  P  +T+  ++  L
Sbjct: 249 ELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGL 308

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDML---ITKLDQLEKSYD 458
           C  GK+ +A  L+  M E    P+  +Y ++   + K+D+L+ + D
Sbjct: 309 CKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMAND 354



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 174/360 (48%), Gaps = 11/360 (3%)

Query: 91  LLMALVMLNEQETAVKFFSEASSY-GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
           L+ A  +  E + A+    E     G+AP    ++  +   C      EA +V+  M D 
Sbjct: 24  LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
              P+V TF  L+  LCK+GRL EA +VLD+M R G   N+ TYN L+ GL   GR  EA
Sbjct: 84  ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-GVTPNVVTFNTLFN 268
             ++  +      PD  TY A++ GFCK G  + A   L E  +R G +P+  T++ L N
Sbjct: 144 VLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200

Query: 269 GYCKEGTPMKGVGLLK-LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           G CK     K   LL+ ++ +++C    ++++TL++G  K   +  A  +   M+  G  
Sbjct: 201 GLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCA 260

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    ++++ GLC     +K      + + EKM  +    D  TY +++  L K  K  
Sbjct: 261 PDVVTYSTIIDGLCRCGDVDK-----GFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMV 315

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA   +   +E G  P  +T++ V   LC   K+D A  LL  + +  ++    +++ L+
Sbjct: 316 EACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 171/353 (48%), Gaps = 11/353 (3%)

Query: 63  ASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           A  L+  +D+   +++  G   + S +N  + AL    +   A++           P+  
Sbjct: 31  AGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVV 90

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I   C      EA++V+D M  +G+  N+ T+  L+N L  +GR  EA+ V+  M
Sbjct: 91  TFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGM 150

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGR 240
                 P+ QTYN ++ G C  G ++ AY  L  +K   G  PD +TY+ +++G CK   
Sbjct: 151 TTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN 207

Query: 241 SNEAMELLNEAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
             +A ELL E I R     +VV FNTL +GYCK     +   LL  M +  C PD ++YS
Sbjct: 208 LRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYS 267

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           T+++GL + G +    ++ ++MV  G + D      L+ GLC     +   + +A ++ +
Sbjct: 268 TIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLC-----KAGKMVEACRLVK 322

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +M +     +  TY +V   L K  K D A   L    + G +   + F  ++
Sbjct: 323 RMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 140/278 (50%), Gaps = 5/278 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E   + D +++ G   ++  +N L+  L        AV      ++    P++ 
Sbjct: 101 KAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQ 157

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T++ +I  +C   +   A   ++ M    G  P+  T++IL+N LCKS  L++A E+L +
Sbjct: 158 TYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQE 217

Query: 181 M-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           M GR  C  ++  +N L+ G C    ++ A E+L ++   G  PDV TY+ ++DG C+ G
Sbjct: 218 MIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCG 277

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
             ++   LL + + RG  P+VVT+  L  G CK G  ++   L+K M +  C P+ ++YS
Sbjct: 278 DVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYS 337

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
            + +GL K  K+  A  +   +   G   D     +LL
Sbjct: 338 LVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 204/441 (46%), Gaps = 31/441 (7%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A    E   + +  +  G+  SV  +N +L  L  + + + A+K F E      APN  T
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLST 379

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I   C       A ++ D M   G  PNV T  I+V+ LCKS +L EA  + ++M 
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              C P+  T+  L+ GL  VGRV++AY++   + +   + +   YT+++  F   GR  
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +  ++  + I +  +P++   NT  +   K G P KG  + + +K R  +PD  SYS L+
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC----------------MKSWE 346
           +GL+K G       +F  M   G  +D R  N ++ G C                 K +E
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619

Query: 347 EK--------------DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
                           D L++AY +FE+   K    +   Y  +I   GK  + DEA + 
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L   ++ G  P   T+N+++ AL    +I++AL+    M E    P++ +Y +LI  L +
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739

Query: 453 LEKSYDACALYGAALKQGVIP 473
           + K   A   +    KQG+ P
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKP 760



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 192/445 (43%), Gaps = 40/445 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L    ++ DS++K G   +V   N ++  L    + + A   F E       P+  
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF  +I          +A KV + M D+    N   +T L+ +    GR ++  ++   M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508

Query: 182 GRIGCKPNIQ-----------------------------------TYNCLLKGLCYVGRV 206
               C P++Q                                   +Y+ L+ GL   G  
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            E YE+  ++K  G   D   Y  V+DGFCK G+ N+A +LL E   +G  P VVT+ ++
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G  K     +   L +  K +    + + YS+L++G  K G+I  A  I +E+++ G 
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             +    NSLL  L +K+ E    + +A   F+ M +     +  TYGI+I  L K +K 
Sbjct: 689 TPNLYTWNSLLDAL-VKAEE----INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           ++A +      + G  P TI++  +I  L   G I +A  L      +  +P    Y+ +
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803

Query: 447 ITKLDQLEKSYDACALYGAALKQGV 471
           I  L    ++ DA +L+    ++G+
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGL 828



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 197/447 (44%), Gaps = 41/447 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F+ +KKD    ++S +N L+  L    + +TA +        GL PN  
Sbjct: 355 KMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVR 413

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T +IM+   C      EA  + + M      P+  TF  L++ L K GR+ +A +V ++M
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYE------------------------------ 211
               C+ N   Y  L+K     GR E+ ++                              
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533

Query: 212 -----MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                M   +K     PD  +Y+ ++ G  K G +NE  EL     E+G   +   +N +
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G+CK G   K   LL+ MK +   P  ++Y ++++GL K  ++  A  +F+E      
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           E++  + +SL+ G     + +   +++AY + E++ +K    +  T+  ++  L K ++ 
Sbjct: 654 ELNVVIYSSLIDG-----FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           +EAL+      E+   P  +T+  +I  LC   K +KA +    M +    PS  SY  +
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I+ L +     +A AL+      G +P
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVP 795



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 186/447 (41%), Gaps = 24/447 (5%)

Query: 45  LKENPRSLQAQRFVDRIKASP-----------LKERIDIFDSIKKDGTNWSVSDFN---- 89
           LK+  R+++  R+ +R    P           +  R   FD++ +     SV+ F     
Sbjct: 75  LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVN 134

Query: 90  ---DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
              ++++  V  N+             +   P    ++ +I  +   N       +   M
Sbjct: 135 TCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM 194

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            + GY P V  FT L+    K GR+  AL +LD+M       +I  YN  +     VG+V
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           + A++    ++ +GLKPD  TYT+++   CK  R +EA+E+     +    P    +NT+
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             GY   G   +   LL+  + +  +P  I+Y+ +L  L K GK+  A+ +F+EM +   
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA- 373

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             +    N L+  LC         L+ A+++ + M K     +  T  I++  L K +K 
Sbjct: 374 APNLSTYNILIDMLC-----RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           DEA             P  ITF ++I  L   G++D A  +   M +     +   Y  L
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I       +  D   +Y   + Q   P
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSP 515



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 6/329 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
             P K R  +F+ IK          ++ L+  L+         + F      G   ++  
Sbjct: 531 GEPEKGRA-MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I  +C      +A ++++ M   G+ P V T+  +++ L K  RL EA  + ++  
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
               + N+  Y+ L+ G   VGR++EAY +L  +   GL P++YT+ +++D   K    N
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA+       E   TPN VT+  L NG CK     K     + M+K+   P  ISY+T++
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +GL K G I  A ++F      G   D    N+++ GL        +   DA+ +FE+  
Sbjct: 770 SGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL-----SNGNRAMDAFSLFEETR 824

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
           ++       T  +++ TL K    ++A I
Sbjct: 825 RRGLPIHNKTCVVLLDTLHKNDCLEQAAI 853


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 204/435 (46%), Gaps = 6/435 (1%)

Query: 41  ESLDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E +D+   P  +     +D  +K   L+    + D +  DG   ++  +N LL  L    
Sbjct: 219 EMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAG 278

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
             +       E +S+ + P+ +T+SI+        +      +       G      T +
Sbjct: 279 RMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCS 338

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           IL+N LCK G++ +A +VL+ +   G  P    YN L+ G C V  +  A+ +   +K+ 
Sbjct: 339 ILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            ++PD  TY A+++G CK+    +A +L+ E  + GV P+V TFNTL + Y   G   K 
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             +L  M+++    D IS+ +++    K GKI  AV+I  +M+      + ++ NS++  
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSII-- 516

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
               ++ E    E A+ + EKM          TY ++++ L +  + DEA   ++     
Sbjct: 517 ---DAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 573

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P  +++N +I A C +G  DKAL LL  M ++   P+  +Y  L++ L    + +D 
Sbjct: 574 GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDM 633

Query: 460 CALYGAALKQGVIPQ 474
             LY   L + V P 
Sbjct: 634 ECLYQQMLHKNVEPS 648



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 178/386 (46%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++  L    +   A+K F E    G+ PN  T++ MI  +    D     ++ D M 
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 256

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G  PN+ T+ +L++ LC++GR+ E   ++D+M      P+  TY+ L  GL   G   
Sbjct: 257 HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 316

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
               +       G+    YT + +++G CK G+  +A ++L   +  G+ P  V +NTL 
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 376

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NGYC+         + + MK R+  PD I+Y+ L+NGL K   +  A  +  EM + G +
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 436

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N+L+      ++     LE  + V   M +K   +D  ++G V++   K  K  
Sbjct: 437 PSVETFNTLI-----DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA+  L   I     P    +N++I A    G  ++A LL+  M       S  +Y++L+
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 551

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L +  +  +A  L      QG+ P
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRP 577



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 166/332 (50%), Gaps = 9/332 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P++++++++I          +A KV D M D G  PN  T+  +++   K G L+    +
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 251

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
            DQM   G KPNI TYN LL GLC  GR++E   ++  + +  + PD +TY+ + DG  +
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G S   + L  E++++GV     T + L NG CK+G   K   +L+++     +P  + 
Sbjct: 312 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 371

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+TL+NG  +   +R A  IF++M       D    N+L+ GLC     + +++  A  +
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLC-----KLEMVTKAEDL 426

Query: 358 FEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
             +M K  S  DP   T+  +I   G   + ++    L    + G     I+F +V++A 
Sbjct: 427 VMEMEK--SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 484

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           C  GKI +A+ +L  M      P+   Y+ +I
Sbjct: 485 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSII 516



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 182/397 (45%), Gaps = 10/397 (2%)

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           S+  DG  +S+     L   L    E  T +  F+E+   G+   ++T SI++   C   
Sbjct: 294 SMFPDGFTYSI-----LFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG 348

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
              +A +V++ +   G  P    +  L+N  C+   L+ A  + +QM     +P+  TYN
Sbjct: 349 KVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 408

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+ GLC +  V +A +++M ++  G+ P V T+  ++D +   G+  +   +L++  ++
Sbjct: 409 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 468

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           G+  +V++F ++   +CK G   + V +L  M  ++  P+   Y+++++  ++ G    A
Sbjct: 469 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQA 528

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
             + ++M   G        N LL+GLC  S      +++A ++   +  +    D  +Y 
Sbjct: 529 FLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ-----IDEAEELIYTLRNQGLRPDVVSYN 583

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            +I        TD+AL  L    + G  P   T++ ++ AL   G++     L   M   
Sbjct: 584 TIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 643

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
              PS + Y +++    + E      +L     ++G+
Sbjct: 644 NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 128/260 (49%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+   ++K G + SV  FN L+ A     + E      S+    G+  +  +F  +++ +
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 484

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      EA  ++D M      PN   +  ++++  +SG  ++A  ++++M   G   +I
Sbjct: 485 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI 544

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN LLKGLC   +++EA E++  ++N GL+PDV +Y  ++   C  G +++A+ELL E
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             + G+ P + T++TL +     G       L + M  +N  P    Y  +++  ++   
Sbjct: 605 MNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 664

Query: 311 IRPAVSIFKEMVRFGFEVDE 330
                S+ KEM   G   D+
Sbjct: 665 DSKVASLKKEMSEKGIAFDD 684



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/228 (21%), Positives = 107/228 (46%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L++   +   +++ G    V  F  ++ A     +   AV    +     +APN+  
Sbjct: 452 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  Y    D  +A  +++ M ++G   ++ T+ +L+  LC+S ++ EA E++  + 
Sbjct: 512 YNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 571

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G +P++ +YN ++   C  G  ++A E+L  +   G++P + TY  ++      GR +
Sbjct: 572 NQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVH 631

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           +   L  + + + V P+   +  + + Y +     K   L K M ++ 
Sbjct: 632 DMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/196 (20%), Positives = 95/196 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + I D +       +   +N ++ A +   + E A     +  + G++ +  
Sbjct: 486 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIV 545

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++++  C  +   EA ++I  + + G  P+V ++  ++++ C  G   +ALE+L +M
Sbjct: 546 TYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 605

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G +P ++TY+ L+  L   GRV +   +   + +  ++P    Y  ++D + +    
Sbjct: 606 NKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEND 665

Query: 242 NEAMELLNEAIERGVT 257
           ++   L  E  E+G+ 
Sbjct: 666 SKVASLKKEMSEKGIA 681



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 67/137 (48%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I++   ++   + + +K  G + S+  +N LL  L   ++ + A +      + GL P+ 
Sbjct: 520 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++ +I   CNK D  +A +++  M   G  P + T+  LV++L  +GR+ +   +  Q
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 639

Query: 181 MGRIGCKPNIQTYNCLL 197
           M     +P+   Y  ++
Sbjct: 640 MLHKNVEPSSSIYGIMV 656



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 42/218 (19%)

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
           LP   S + LL  LL  G+     + F  +V  G   D    N +++  C+ + +    L
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQA-CVAAGD----L 173

Query: 352 EDAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
           + A  +  +M +      P   +Y +VI  L +  K  +AL      ++MG +P  IT+N
Sbjct: 174 DVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYN 233

Query: 410 NVI-----------------------------------QALCGEGKIDKALLLLFLMYEH 434
            +I                                     LC  G++D+  +L+  M  H
Sbjct: 234 TMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASH 293

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           +  P   +Y +L   L +  +S    +L+  +LK+GV+
Sbjct: 294 SMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVM 331



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM--YEHAKIPSRTSYDMLITKLDQLE 454
           +  G  P T  +N V+QA    G +D AL ++  M   E A  P   SY+++I  L +  
Sbjct: 149 VAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSG 208

Query: 455 KSYDACALYGAALKQGVIP 473
           K  DA  ++   +  GV+P
Sbjct: 209 KGSDALKVFDEMVDMGVVP 227


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 184/356 (51%), Gaps = 15/356 (4%)

Query: 80  GTNWS--VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           G N+   V  ++ ++ AL     ++ A   F E    G+ P   +++ ++        + 
Sbjct: 235 GINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WE 286

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA+++ + M + G  PNV TF +L++ LCK G++ EA ++L+ M + G  PN+ TYN L+
Sbjct: 287 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 346

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
           +G C VG +  A E+ +++ + G +PDV  YT +++G+CK  +  EAM+L N  ++ G  
Sbjct: 347 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 406

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+V T+  L  G  + G       L  +MK      D   Y   LNGL K G +  A+ +
Sbjct: 407 PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMEL 466

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F ++  +  ++D    N L+ GLC     +   LE A+++FEK+ ++    D  TY I+I
Sbjct: 467 FNKLKSYNIKLDIECFNCLIDGLC-----KAGKLETAWELFEKLPQEELQPDVVTYNIMI 521

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
               +G +  +A I      + G  P  IT+  +I+      K++K + LL +M +
Sbjct: 522 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 577



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 199/459 (43%), Gaps = 73/459 (15%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +S F  LL  L  +         +++    G++P+  T +I++ C CN N   E   V+ 
Sbjct: 96  LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMA 155

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY P++ T+T L+  LC   R+ +A  +  +M ++GC PN  TY  L+KGLC  G
Sbjct: 156 GILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTG 215

Query: 205 RVEEAYEMLMNVKNDG------LKPDVYTYTAVMDGFCKVGRSNEAME------------ 246
            +  A ++   + ND        KP V +Y+ ++D  CK  R +EA +            
Sbjct: 216 NISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTP 275

Query: 247 ---------------LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
                          L NE + +GV PNVVTFN L +  CKEG  ++   LL++M +R  
Sbjct: 276 TVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGI 335

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
           +P+ ++Y++L+ G    G +  A  +F  M   G E D      L+ G C  S      +
Sbjct: 336 VPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSK-----V 390

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA---------------------- 389
           E+A +++  M +     D  TYG ++  L +G K  +A                      
Sbjct: 391 EEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIF 450

Query: 390 ------------LIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
                        + L + ++  +I   I  FN +I  LC  GK++ A  L   + +   
Sbjct: 451 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 510

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            P   +Y+++I +  +  +   A  L+    K G  P +
Sbjct: 511 QPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDK 549



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 138/272 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  D+ + + + G   ++  +N L+    ++ +  +A + F    S G  P+  
Sbjct: 316 KEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVI 375

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++++I  YC  +   EA K+ + M   G  P+V T+  L+  L + G++ +A ++   M
Sbjct: 376 CYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM 435

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   ++  Y   L GLC  G + EA E+   +K+  +K D+  +  ++DG CK G+ 
Sbjct: 436 KVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKL 495

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A EL  +  +  + P+VVT+N + + +C+ G  +K   L + M+K  C PDKI+Y+TL
Sbjct: 496 ETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATL 555

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           + G  +  K+   V +   MV+    +D  ++
Sbjct: 556 IRGFFESKKLEKVVELLHMMVQRDVSLDVNIL 587



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 147/330 (44%), Gaps = 19/330 (5%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +++FT L++ L K     +   + +QM   G  P+  T N LL  LC V RV E   +
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           +  +   G  PD+ TYT ++ G C   R ++A  L     + G TPN +T+ TL  G C+
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 273 EGTPMKGVGLLKLMKKRNCL------PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            G     + L + M   + L      P  ISYS +++ L K  +   A  +F+EM   G 
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
                   SL+       WEE      A ++F +M  +    +  T+ ++I  L K  K 
Sbjct: 274 TPTVISYTSLM-------WEE------AKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKV 320

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            EA   L   I+ G +P  +T+N++I+  C  G ++ A  L   M      P    Y +L
Sbjct: 321 IEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVL 380

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           I    +  K  +A  LY   L+ G  P  K
Sbjct: 381 INGYCKTSKVEEAMKLYNGMLQVGKRPDVK 410


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 170/320 (53%), Gaps = 11/320 (3%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P   TF+ +I   C + +   A  ++  M  +G   +V T+  L++ LCK+GRL+EA
Sbjct: 147 GCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEA 206

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            ++L++M   GC P++  Y+  + GLC  G+V +A+++L  +++    P+V TY  ++DG
Sbjct: 207 EQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDG 266

Query: 235 FCKVGRSNEAMELLNE-AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
            CK G+ + A+E++ + A   G   NVV ++T+ +G CK G   +   +++ M +  C P
Sbjct: 267 LCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRP 326

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D ++YS+L+NGL K GKI  AV   +EM   G + +     SL+ GLC         L +
Sbjct: 327 DVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR-----LAE 381

Query: 354 AYQVFEKMTKKVSVT-----DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
           A ++ E+M+              TY  +I  L K  + D+AL         G  P  +++
Sbjct: 382 AERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSY 441

Query: 409 NNVIQALCGEGKIDKALLLL 428
           + +++ L   G+  +A ++L
Sbjct: 442 STIVEGLARSGRALQAEMIL 461



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 196/397 (49%), Gaps = 13/397 (3%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYG--LAPNSWTFSIMIRCYCNKNDFFEARKV 142
           V  +N LL  L  L     A +   +  S G    P+  T+S ++  YC      E+R++
Sbjct: 45  VVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESREL 104

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           +  +   G  P+   +T +V SLCKS RL EALE+L++M R GC P + T+N L+ G C 
Sbjct: 105 LKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCR 164

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
              +E A  +L  +   G+K DV TY  +MDG CK GR  EA +LL      G  P+VV 
Sbjct: 165 EKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVA 224

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           +++   G CK G  +    +L+ M+  +  P+ ++Y+T+L+GL K GKI  A+ + ++M 
Sbjct: 225 YSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA 284

Query: 323 RF-GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G  ++    ++++ GLC     +    ++A  V E M +     D  TY  ++  L 
Sbjct: 285 SSDGCGLNVVGYSTVVDGLC-----KLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLC 339

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI---- 437
           K  K +EA+  +      G  P  +T+ +++  LC  G++ +A  ++  M          
Sbjct: 340 KAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHC 399

Query: 438 -PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            PS ++Y+ LI  L +  +  DA   +     QG  P
Sbjct: 400 PPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDP 436



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 179/353 (50%), Gaps = 15/353 (4%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PNS TF+ ++  +  +    +  ++++ M      PNV ++  L+  LCK  R  EA
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 175 LE-VLDQMGRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
            E V D + R G   P++ TY+ LL G C  G+VEE+ E+L  V + GL+PD   YT V+
Sbjct: 65  EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
              CK  R  EA+ELL E I  G  P ++TFNTL +G C+E        LL+ M      
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVK 184

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            D ++Y+TL++GL K G+++ A  + + M   G   D    +S + GLC KS +    + 
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC-KSGK----VL 239

Query: 353 DAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHH-AIEMGHIPRTITFN 409
           DA+QV E+M  + S  DP   TY  ++  L K  K D AL  +   A   G     + ++
Sbjct: 240 DAHQVLEQM--RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDA 459
            V+  LC  G+  +A  ++  M      P   +Y  L+    K  ++E++ +A
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEA 350



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 165/331 (49%), Gaps = 8/331 (2%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G  PN  TF  LVN   K GR  +   +L+ M     +PN+ +YN LL+GLC + R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 206 VEEAYEMLMNVKNDGLK--PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
             EA E++ ++ + G +  PD+ TY+ ++ G+CK G+  E+ ELL E I RG+ P+ + +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             +    CK     + + LL+ M +  C P  I+++TL++G  +   +  A S+ ++M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G + D    N+L+ GLC     +   L++A Q+ E+M       D   Y   +  L K 
Sbjct: 181 SGVKADVVTYNTLMDGLC-----KAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP-SRTS 442
            K  +A   L    +  H P  +T+N ++  LC  GKID AL ++  M        +   
Sbjct: 236 GKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVG 295

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           Y  ++  L +L ++ +A ++  A  + G  P
Sbjct: 296 YSTVVDGLCKLGRTQEARSVMEAMARAGCRP 326



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 41/291 (14%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +   +   G    V  +N L+  L      + A +      + G AP+   +S  +   C
Sbjct: 174 LLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC 233

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG--------- 182
                 +A +V++ M D+ + PNV T+  +++ LCKSG++  ALE+++QM          
Sbjct: 234 KSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV 293

Query: 183 ---------------------------RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
                                      R GC+P++ TY+ L+ GLC  G++EEA E +  
Sbjct: 294 VGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVRE 353

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE-----AIERGVTPNVVTFNTLFNGY 270
           +  +G KP+  TY +++ G C  GR  EA  ++ E            P+V T+N L  G 
Sbjct: 354 MAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGL 413

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           CK G     +   + M+ + C PD +SYST++ GL + G+   A  I  E+
Sbjct: 414 CKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 80/156 (51%), Gaps = 5/156 (3%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           +E   + +++ + G    V  ++ L+  L    + E AV+   E +  G  PN+ T+  +
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYH-----PNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +   C+     EA ++++ M   G       P+V+T+  L+  LCK+GR+ +AL+   +M
Sbjct: 370 VHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRM 429

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
              GC P+  +Y+ +++GL   GR  +A  +L  V+
Sbjct: 430 RSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 193/411 (46%), Gaps = 6/411 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE  +IF SI   G    +  ++ LL               F   +  G+  +S  F+I+
Sbjct: 394 KEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNIL 453

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I  +  +    EA  +   M   G  PNV T+  ++ +LC+ GRL +A+E L QM  IG 
Sbjct: 454 INAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGL 513

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL-KPDVYTYTAVMDGFCKVGRSNEAM 245
           KPN   Y+ L++G C  G + +A E++  + + G+ +P++  +++++   C  GR   A 
Sbjct: 514 KPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQ 573

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ N  I  G  P++ TFN+L +GYC  G   K  G+L  M      PD ++YSTL+NG 
Sbjct: 574 DVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGY 633

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I   + +F+EM+    +      + +L GL             A ++F +M +  
Sbjct: 634 FKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSA-----AKKMFHEMIESG 688

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           +     TY I+++ L +   TDEA+   H    M         N +I AL    + ++A 
Sbjct: 689 TAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAH 748

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            L   +     +P+ ++Y ++I  L +     +A  ++ +  K G  P  +
Sbjct: 749 DLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSR 799



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 186/397 (46%), Gaps = 4/397 (1%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           K DG +  V  +  ++  L M  E   A   F+E    G+ PN  T++ ++   C     
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            +A  V+  MFDN   P+  T+T +++     GR KEA ++  +M R G  P+I T+N L
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           +  LC   R +EA E+  ++   G KPD+ +Y+ ++ G+   GR  +   L +   + G+
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
             +   FN L N + K G   + + +   M+ +   P+ ++Y+T++  L + G++  A+ 
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
              +M+  G + +  + +SL++G C       DL++    V E M + +   +   +  +
Sbjct: 504 KLSQMISIGLKPNTVVYHSLIQGFC----THGDLIKAKELVSEMMDQGIPRPNITFFSSI 559

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I +L    +   A    +  I +G  P   TFN++I   C  GK+DKA  +L  M     
Sbjct: 560 IHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGT 619

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            P   +Y  LI    +  +  D   L+   L + V P
Sbjct: 620 EPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKP 656



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 192/364 (52%), Gaps = 6/364 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + IF  ++  G + +V  +  ++ AL  +     A++  S+  S GL PN+ 
Sbjct: 459 KRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTV 518

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGY-HPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +  +I+ +C   D  +A++++  M D G   PN+T F+ +++SLC  GR+  A +V + 
Sbjct: 519 VYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNL 578

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           +  IG +P+I T+N L+ G C VG++++A+ +L  + + G +PDV TY+ +++G+ K GR
Sbjct: 579 VIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGR 638

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++ + L  E + + V P  VT++ + +G  + G       +   M +        +Y+ 
Sbjct: 639 IDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTI 698

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +L GL +      A+++F ++     + +  ++N+++  L    ++ K   E+A+ +F  
Sbjct: 699 ILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHAL----YKVKR-REEAHDLFAS 753

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           ++    V +  TYG++I  L K    +EA I      + G  P +   N++I+ L  +G+
Sbjct: 754 VSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGE 813

Query: 421 IDKA 424
           I KA
Sbjct: 814 IVKA 817



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 187/420 (44%), Gaps = 27/420 (6%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQ-------ETAVKFFS-----EASSYGLAPN 119
           +FD + +  T       N  L AL    +          AV  F+     EA    +   
Sbjct: 105 LFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEAGPRVVPLT 164

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VL 178
             T+ I++ C C              +   G   +       +  LC + R  EAL  +L
Sbjct: 165 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLL 224

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-KNDGLKPDVYTYTAVMDGFCK 237
            +M  +GC P+  +YN ++K LC   R +EA +ML+ + K DG  PDV +YT V+ G   
Sbjct: 225 HRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFM 284

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G  ++A  L NE +++GV PNVVT+N++ +  CK     K   +L+ M   +  PD+++
Sbjct: 285 EGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVT 344

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+ +++G    G+ + A  +FKEM R G   D    NSL+  LC          ++A ++
Sbjct: 345 YTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRS-----KEAAEI 399

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL----HHAIEMGHIPRTITFNNVIQ 413
           F  +  K    D  +Y I++     G  T+   + +    H   + G +  +  FN +I 
Sbjct: 400 FHSIATKGHKPDIISYSILLH----GYATEGRFVDMNNLFHSMTDNGIVADSHCFNILIN 455

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A    G +D+ALL+   M      P+  +Y  +I  L ++ +  DA       +  G+ P
Sbjct: 456 AHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKP 515



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 78/177 (44%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  + + GT  S+S +  +L  L   N  + A+  F +  +  L       + MI    
Sbjct: 680 MFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALY 739

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA  +   +  +G  PN +T+ +++ +L K G ++EA  +   M + GC P+ +
Sbjct: 740 KVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSR 799

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
             N +++ L   G + +A   +  V    +  +  T + ++  F   GR  E ++ L
Sbjct: 800 LLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKFL 856


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 185/387 (47%), Gaps = 7/387 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E + +F  + +D    +V  +  ++ AL  L  +  A+  F E +     PN  
Sbjct: 286 EARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVH 345

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I   C  ++F +A+K+++ M + G  P+V T+  L++  CK G    ALE+L  M
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C PN +TYN L+ G C    + +A  +L  +    L+P+V TY  ++ G CK G  
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDL 465

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A +LL+   E G+ P+  T++   +  CK G   +   L + +K++    +++ YSTL
Sbjct: 466 GSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTL 525

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEEKDLLEDAYQVFEK 360
           ++G  K GK+     +  +M+  G   +    NSL+ G C  K+++E  LL D       
Sbjct: 526 IDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDI------ 579

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M K+       TY I+I  L K  + D+A       +  G  P    +   I A C  G+
Sbjct: 580 MIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGR 639

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +  A +L+  M     +P    Y + I
Sbjct: 640 LKDAEVLICKMNAKGIMPDTMLYTLFI 666



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 173/341 (50%), Gaps = 5/341 (1%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
           + S+    GL+ +++T++ +I  YC   +   A  +   M + G   N  ++T L++  C
Sbjct: 226 YVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFC 285

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           ++ R+ EAL++  QM    C P ++TY  ++  LC +GR  EA  M   +     +P+V+
Sbjct: 286 EARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVH 345

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYT ++   C+    ++A ++LN  +E+G+ P+VVT+N L +GYCK+G     + +L LM
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           +  NC P+  +Y+ L+ G  +   I  A+S+  +M+    + +    N L+ G C    +
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQC----K 461

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
           E D L  AY++   M +   V D  TY + I TL K    +EA        E G     +
Sbjct: 462 EGD-LGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEV 520

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            ++ +I   C  GK+     LL  M     +P+  +Y+ LI
Sbjct: 521 IYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLI 561



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 191/405 (47%), Gaps = 46/405 (11%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF S+   G   +   + +L+         + A+K FS+       P   T++++I   C
Sbjct: 261 IFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALC 320

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA  +   M +    PNV T+T+L+ SLC+     +A ++L+ M   G  P++ 
Sbjct: 321 QLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVV 380

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G C  G    A E+L  ++++   P+  TY  ++ GFC+    ++AM LL++ 
Sbjct: 381 TYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKM 440

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +ER + PNVVT+N L +G CKEG       LL LM +   +PD+ +YS  ++ L K G +
Sbjct: 441 LERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLV 500

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A S+F+ +   G + +E + ++L+ G C                      KV      
Sbjct: 501 EEARSLFESLKEKGIKANEVIYSTLIDGYC----------------------KV------ 532

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
                      GK +D   + L   +  G +P +IT+N++I   C E    +A LL+ +M
Sbjct: 533 -----------GKVSDGRFL-LDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIM 580

Query: 432 YEHAKIPSRTSYDMLITKL---DQLEKSYDACALYGAALKQGVIP 473
            +    P+  +Y +LI  L   D+ ++++D   ++   L  G  P
Sbjct: 581 IKRDIEPAADTYTILIDNLLKDDEFDQAHD---MFDQMLSTGSHP 622



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 163/392 (41%), Gaps = 26/392 (6%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +N L+       +  +A K  S  +  GL P+ WT+S+ I   C +    EAR + 
Sbjct: 448 NVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLF 507

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           + + + G   N   ++ L++  CK G++ +   +LD+M   GC PN  TYN L+ G C  
Sbjct: 508 ESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKE 567

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
              +EA  ++  +    ++P   TYT ++D   K    ++A ++ ++ +  G  P+V  +
Sbjct: 568 KNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIY 627

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
               + YC  G       L+  M  +  +PD + Y+  ++   ++G I  A  I K M  
Sbjct: 628 TAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHE 687

Query: 324 FGFEVDERMMNSLLRGLC-------------------------MKSWEEKDLLEDAYQVF 358
            G E      + L++ L                             W   D  E    +F
Sbjct: 688 VGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVD-YEFTLDLF 746

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            KM +     +  TYG  I  L K    + A     H  E G  P    +N+++   C  
Sbjct: 747 GKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQL 806

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           G   +A+  L +M E+  +P   S  +L+  L
Sbjct: 807 GLYGEAIRWLDIMIENRHLPHLDSCKLLLCGL 838



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 164/349 (46%), Gaps = 29/349 (8%)

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEA--------------------LEVLDQMGR----I 184
           +G+  NV +   ++N L  +G L+ A                    LE+L  M R     
Sbjct: 104 HGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAF 163

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
             K  ++ YN LL  L     ++E   + + + +D + P+++T   +++G+CK+G   EA
Sbjct: 164 KFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEA 223

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
              +++ ++ G++ +  T+ +L  GYC+         +   M  + CL +++SY+ L++G
Sbjct: 224 ELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHG 283

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             +  ++  A+ +F +M         R    ++  LC    +      +A  +F++MT+K
Sbjct: 284 FCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRK-----TEALNMFKEMTEK 338

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               +  TY ++I +L +    D+A   L+  +E G IP  +T+N +I   C +G    A
Sbjct: 339 HCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASA 398

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L +L LM  +   P+  +Y+ LI    + +  + A +L    L++ + P
Sbjct: 399 LEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQP 447



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 152/370 (41%), Gaps = 37/370 (10%)

Query: 49  PRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+     +D   K    KE   + D + K     +   +  L+  L+  +E + A   
Sbjct: 552 PNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDM 611

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F +  S G  P+ + ++  I  YC+     +A  +I  M   G  P+   +T+ +++  +
Sbjct: 612 FDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGR 671

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL--------------------------- 200
            G +  A  +L +M  +GC+P+  TY+CL+K L                           
Sbjct: 672 FGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFS 731

Query: 201 -CYVGRVEEAY--EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            C+  RV+  +  ++   +   G  P+  TY   + G CKVG    A  L +   E+G +
Sbjct: 732 NCW-RRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQS 790

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PN   +N+L    C+ G   + +  L +M +   LP   S   LL GL   G    A  +
Sbjct: 791 PNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRV 850

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F   ++  +  DE +   L+ GL  K   +K    D + + E    ++    P TY ++I
Sbjct: 851 FCSFLQCEYNYDEMVWKVLIDGLLKKGLSDK--CSDLFGIMETQGCQIH---PKTYSMLI 905

Query: 378 RTLGKGKKTD 387
                 ++ D
Sbjct: 906 EGFDGIQEID 915


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 210/445 (47%), Gaps = 42/445 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF--FSEASSYGLAPNSWTF 123
           L + I +F  + K     S+ +FN LL A+  + + +  +      +    G  P+  T 
Sbjct: 23  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           S ++  YC+     +A  ++D M + GY P+  TFT L++ L    +  EA+ ++D+M +
Sbjct: 83  SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEML------------------------------ 213
            GC+PN+ TY  ++ GLC  G ++ A+ +L                              
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 202

Query: 214 -----MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
                  ++  G++P+V TY++++   C  GR ++A +LL++ IE+ + PN+VTFN L +
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 262

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
            + KEG  ++   L   M KR+  PD  +Y++L+NG     ++  A  +F+ MV      
Sbjct: 263 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 322

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D    N+L++G C     +   +ED  ++F +M+ +  V D  TY  +I+ L      D 
Sbjct: 323 DLDTYNTLIKGFC-----KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 377

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A       +  G  P  +T++ ++  LC  GK++KAL +   M +         Y  +I 
Sbjct: 378 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 437

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            + +  K  D   L+ +   +GV P
Sbjct: 438 GMCKAGKVDDGWDLFCSLSLKGVKP 462



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 197/410 (48%), Gaps = 7/410 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + + D + + G       F  L+  L + N+   AV         G  PN  T+ +
Sbjct: 95  ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 154

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C + D   A  +++ M       +V  F  +++SLCK   + +AL +  +M   G
Sbjct: 155 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 214

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+ TY+ L+  LC  GR  +A ++L ++    + P++ T+ A++D F K G+  EA 
Sbjct: 215 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 274

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L ++ I+R + P++ T+N+L NG+C      K   + + M  ++C PD  +Y+TL+ G 
Sbjct: 275 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 334

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++     +F+EM   G   D     +L++GL    + + D  ++A +VF++M    
Sbjct: 335 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL----FHDGD-CDNAQKVFKQMVSDG 389

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKA 424
              D  TY I++  L    K ++AL  +   ++   I   I  +  +I+ +C  GK+D  
Sbjct: 390 VPPDIMTYSILLDGLCNNGKLEKAL-EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 448

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             L   +      P+  +Y+ +I+ L       +A AL     + G +P 
Sbjct: 449 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 498



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 169/337 (50%), Gaps = 7/337 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN ++ +L      + A+  F E  + G+ PN  T+S +I C C+   + +A +++  M 
Sbjct: 187 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 246

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +   +PN+ TF  L+++  K G+  EA ++ D M +    P+I TYN L+ G C   R++
Sbjct: 247 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 306

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A +M   + +    PD+ TY  ++ GFCK  R  +  EL  E   RG+  + VT+ TL 
Sbjct: 307 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 366

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G   +G       + K M      PD ++YS LL+GL   GK+  A+ +F  M +   +
Sbjct: 367 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 426

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           +D  +  +++ G+C     +   ++D + +F  ++ K    +  TY  +I  L   +   
Sbjct: 427 LDIYIYTTMIEGMC-----KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 481

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           EA   L    E G +P + T+N +I+A   +G  DKA
Sbjct: 482 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG--DKA 516



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 143/291 (49%), Gaps = 1/291 (0%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           ++ AS   ++ ++ K NP  +     +D  +K     E   + D + K   +  +  +N 
Sbjct: 235 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 294

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    M +  + A + F    S    P+  T++ +I+ +C      +  ++   M   G
Sbjct: 295 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 354

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +  T+T L+  L   G    A +V  QM   G  P+I TY+ LL GLC  G++E+A 
Sbjct: 355 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 414

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E+   ++   +K D+Y YT +++G CK G+ ++  +L      +GV PNVVT+NT+ +G 
Sbjct: 415 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 474

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           C +    +   LLK MK+   LPD  +Y+TL+   L+ G    +  + +EM
Sbjct: 475 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 40/358 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + +++F  ++  G   +V  ++ L+  L        A +  S+     + PN  
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +  +  F EA K+ D M      P++ T+  L+N  C   RL +A ++ + M
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 315

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN----------------------- 218
               C P++ TYN L+KG C   RVE+  E+   + +                       
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375

Query: 219 ------------DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                       DG+ PD+ TY+ ++DG C  G+  +A+E+ +   +  +  ++  + T+
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 435

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             G CK G    G  L   +  +   P+ ++Y+T+++GL     ++ A ++ K+M   G 
Sbjct: 436 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 495

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             D    N+L+R        + D    A ++  +M     V D  T G+V   L  G+
Sbjct: 496 LPDSGTYNTLIRA----HLRDGDKAASA-ELIREMRSCRFVGDASTIGLVANMLHDGR 548



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE--ALIHLHHAIEMGH 401
           SW +   L+DA  +F  M K   +     +  ++  + K KK D   +L  L   +++G+
Sbjct: 16  SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGY 75

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P  +T ++++   C   +I  A+ L+  M E    P   ++  LI  L    K+ +A A
Sbjct: 76  EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135

Query: 462 LYGAALKQGVIP 473
           L    +++G  P
Sbjct: 136 LVDRMVQRGCQP 147


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 178/358 (49%), Gaps = 5/358 (1%)

Query: 90  DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
           +LL  ++ LN   T   F+ E    G   N + F+I++  +C + +  +A+KV D +   
Sbjct: 210 NLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKR 269

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
              P V +F  L+N  CK G L     +   M +   +P++ TY+ L+  LC   +++ A
Sbjct: 270 SLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGA 329

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
           + +   +   GL P+   +T ++ G  + G+ +   E   + + +G+ P++V +NTL NG
Sbjct: 330 HRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           +CK G  +    ++  M +R   PDK++Y+TL++G  + G +  A+ I KEM + G E+D
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELD 449

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               ++L+ G+C     ++  + DA +   +M +     D  TY +++    K       
Sbjct: 450 RVGFSALICGMC-----KEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTG 504

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              L      GHIP  +T+N ++  LC  G++  A +LL  M     +P   +Y+ L+
Sbjct: 505 FKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLL 562



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 135/264 (51%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++K  T   V  ++ L+ AL   N+ + A + F E    GL PN   F+ +I  +     
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQ 360

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
               ++    M   G  P++  +  LVN  CK+G L  A  ++D M R G +P+  TY  
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTT 420

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G C  G V+ A E+   +  +G++ D   ++A++ G CK GR  +A   L E +  G
Sbjct: 421 LIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAG 480

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           + P+ VT+  + + +CK+G    G  LLK M+    +P+ ++Y+ LLNGL K G+++ A 
Sbjct: 481 MKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNAD 540

Query: 316 SIFKEMVRFGFEVDERMMNSLLRG 339
            +   M+  G   D+   N+LL G
Sbjct: 541 MLLDAMLNVGVVPDDITYNTLLEG 564



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 1/284 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD I K     +V  FN L+     +   +   +           P+ +T+S +I   C
Sbjct: 262 VFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALC 321

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +N    A ++   M + G  PN   FT L++   ++G++    E   +M   G +P+I 
Sbjct: 322 KENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIV 381

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            YN L+ G C  G +  A  ++  +   GL+PD  TYT ++DGFC+ G  + A+E+  E 
Sbjct: 382 LYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEM 441

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            + G+  + V F+ L  G CKEG  +     L+ M +    PD ++Y+ +++   K G  
Sbjct: 442 DQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDA 501

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDA 354
           +    + KEM   G   +    N LL GLC +   +  D+L DA
Sbjct: 502 QTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDA 545



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 3/196 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL P+  T++ +I  +C   D   A ++   M  NG   +   F+ L+  +CK GR+ +A
Sbjct: 410 GLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDA 469

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
              L +M R G KP+  TY  ++   C  G  +  +++L  +++DG  P+V TY  +++G
Sbjct: 470 ERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNG 529

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK+G+   A  LL+  +  GV P+ +T+NTL  G+ +     K     K   +   + D
Sbjct: 530 LCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASKH---YKQKPEIGIVAD 586

Query: 295 KISYSTLLNGLLKWGK 310
             SY +L+N L +  K
Sbjct: 587 LASYKSLVNELYRASK 602



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 3/198 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I D + + G       +  L+       + +TA++   E    G+  +   FS +I   
Sbjct: 401 NIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGM 460

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +    +A + +  M   G  P+  T+T+++++ CK G  +   ++L +M   G  PN+
Sbjct: 461 CKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNV 520

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN LL GLC +G+++ A  +L  + N G+ PD  TY  +++G     R   A +   +
Sbjct: 521 VTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGH---HRHANASKHYKQ 577

Query: 251 AIERGVTPNVVTFNTLFN 268
             E G+  ++ ++ +L N
Sbjct: 578 KPEIGIVADLASYKSLVN 595



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 3/174 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++I   + ++G       F+ L+  +        A +   E    G+ P+  T+++M+  
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDA 494

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C K D     K++  M  +G+ PNV T+ +L+N LCK G++K A  +LD M  +G  P+
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPD 554

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
             TYN LL+G        + Y+    +   G+  D+ +Y ++++   +  + + 
Sbjct: 555 DITYNTLLEGHHRHANASKHYKQKPEI---GIVADLASYKSLVNELYRASKDHR 605



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 11/181 (6%)

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
            +L +K N +        LL+ ++K          + E++  GF ++  + N L+   C 
Sbjct: 193 FRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFC- 251

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
              +E ++  DA +VF+++TK+       ++  +I    K    D      HH  +    
Sbjct: 252 ---KEGNIC-DAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTR 307

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT------KLDQLEKS 456
           P   T++ +I ALC E K+D A  L + M E   IP+   +  LI       ++D +++S
Sbjct: 308 PDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKES 367

Query: 457 Y 457
           Y
Sbjct: 368 Y 368


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 196/430 (45%), Gaps = 41/430 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   +   +KK+G   + + +N L+ A   L   + A       +++G  P+ WT+++
Sbjct: 261 LGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNV 320

Query: 126 MIRCYCNKNDFFEARKVIDCMFD-NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           +    C      EA K+ D M   +   P+V T+  LV++  K  R  +AL +L++M   
Sbjct: 321 LAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDK 380

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV------ 238
           G K ++ T+N ++KGLC  G++EEA   L  +  +GL PDV TY  ++D +CK       
Sbjct: 381 GVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKA 440

Query: 239 -----------------------------GRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
                                         R  EA ELL    +RG  P+ V++ T+   
Sbjct: 441 FVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAA 500

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           Y KE  P   + L   M KR   P   +Y+TL+ GL   GK+  A+    E+++ G   D
Sbjct: 501 YFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPD 560

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
           +   N ++   C    +E DL E A+Q   KM +     D  T   ++  L    K ++A
Sbjct: 561 DTTYNIIIHAYC----KEGDL-EKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKA 615

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           +       E G     IT+N +IQALC +G +D AL     M      P   +Y+++++ 
Sbjct: 616 IKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 675

Query: 450 LDQLEKSYDA 459
           L +  +S +A
Sbjct: 676 LSEAGRSEEA 685



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 188/395 (47%), Gaps = 44/395 (11%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + ++  F    +  L PN +TF++++  +C+K    +A   +  M   G  P+V T+  L
Sbjct: 192 QASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTL 251

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + + C+ G L EA  +L +M + G  P   TYN L+     +G +++A  ++  +   G 
Sbjct: 252 LKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGF 311

Query: 222 KPDVYTYTAVMDGFCKVG------------------------------------RSNEAM 245
           +PD++TY  +  G C+ G                                    RS++A+
Sbjct: 312 EPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDAL 371

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL E  ++GV  ++VT N +  G C+EG   + +G LK+M +    PD I+Y+TL++  
Sbjct: 372 NLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAY 431

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K   +  A  +  EMVR G ++D   +N+LL  LC     ++   E+A ++     ++ 
Sbjct: 432 CKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLC-----KEKRYEEAEELLRSPPQRG 486

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            V D  +YG V+    K  K + AL       +    P   T+N +I+ LC  GK+ +A+
Sbjct: 487 FVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAI 546

Query: 426 LLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSY 457
             L  + +   +P  T+Y+++I    K   LEK++
Sbjct: 547 DKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAF 581



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 185/393 (47%), Gaps = 10/393 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK+ ++    +  D     V  +N L+ A         A+    E    G+  +  T +I
Sbjct: 337 LKDEMEHLSIVSPD-----VVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNI 391

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C +    EA   +  M + G  P+V T+  L+++ CK+  + +A  ++D+M R G
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            K +  T N LL  LC   R EEA E+L +    G  PD  +Y  VM  + K  +   A+
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPAL 511

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L +E  +R +TP++ T+NTL  G C  G   + +  L  + K+  +PD  +Y+ +++  
Sbjct: 512 YLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAY 571

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +  A     +M+   F+ D    N+L+ GLC+        LE A ++FE   +K 
Sbjct: 572 CKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGK-----LEKAIKLFESWAEKG 626

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY  +I+ L K    D AL         G  P   T+N V+ AL   G+ ++A 
Sbjct: 627 KKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQ 686

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            +L  + E  K+  R SY ++ +  ++++   D
Sbjct: 687 NMLHKLDESGKLSERFSYPLIKSSAEEVKTGKD 719



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 135/283 (47%), Gaps = 27/283 (9%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++D + K     S+  +N L+  L  + +   A+   +E    GL P+  T++I+I  YC
Sbjct: 513 LWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYC 572

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            + D  +A +  + M +N + P+V T   L+N LC  G+L++A+++ +     G K ++ 
Sbjct: 573 KEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVI 632

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L++ LC  G V+ A     +++  GL+PD +TY  V+    + GRS EA  +L++ 
Sbjct: 633 TYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKL 692

Query: 252 IERGVTPNVVTFNTLFNGY--------------CKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            E G      ++  + +                C+ G   KG              D+ S
Sbjct: 693 DESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKG-------------GDQES 739

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           Y+  +  L   G+++ A ++  EM++ G  VD     +L+ GL
Sbjct: 740 YNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGL 782



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 89/174 (51%), Gaps = 3/174 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ I +F+S  + G    V  +N L+ AL    + +TA+ FF++  + GL P+++T+++
Sbjct: 612 LEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNV 671

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL--CKSGRLKEALEVLDQMGR 183
           ++          EA+ ++  + ++G      ++ ++ +S    K+G+  E     +  G 
Sbjct: 672 VLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGN 731

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
                + ++YN  +K LC  G+++EA  +L  +   G+  D  TY  +M+G  K
Sbjct: 732 AKGG-DQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 204/434 (47%), Gaps = 6/434 (1%)

Query: 41  ESLDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E +D+   P  +     +D  +K   L+    + D +  DG   ++  +N LL  L    
Sbjct: 41  EMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAG 100

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
             +       E +S+ + P+ +T+SI+        +      +       G      T +
Sbjct: 101 RMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCS 160

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           IL+N LCK G++ +A +VL+ +   G  P    YN L+ G C V  +  A+ +   +K+ 
Sbjct: 161 ILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 220

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            ++PD  TY A+++G CK+    +A +L+ E  + GV P+V TFNTL + Y   G   K 
Sbjct: 221 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 280

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             +L  M+++    D IS+ +++    K GKI  AV+I  +M+      + ++ NS++  
Sbjct: 281 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSII-- 338

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
               ++ E    E A+ + EKM          TY ++++ L +  + DEA   ++     
Sbjct: 339 ---DAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 395

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P  +++N +I A C +G  DKAL LL  M ++   P+  +Y  L++ L    + +D 
Sbjct: 396 GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDM 455

Query: 460 CALYGAALKQGVIP 473
             LY   L + V P
Sbjct: 456 ECLYQQMLHKNVEP 469



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 178/386 (46%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++  L    +   A+K F E    G+ PN  T++ MI  +    D     ++ D M 
Sbjct: 19  YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 78

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G  PN+ T+ +L++ LC++GR+ E   ++D+M      P+  TY+ L  GL   G   
Sbjct: 79  HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 138

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
               +       G+    YT + +++G CK G+  +A ++L   +  G+ P  V +NTL 
Sbjct: 139 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 198

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NGYC+         + + MK R+  PD I+Y+ L+NGL K   +  A  +  EM + G +
Sbjct: 199 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 258

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N+L+      ++     LE  + V   M +K   +D  ++G V++   K  K  
Sbjct: 259 PSVETFNTLI-----DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA+  L   I     P    +N++I A    G  ++A LL+  M       S  +Y++L+
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L +  +  +A  L      QG+ P
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRP 399



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 182/397 (45%), Gaps = 10/397 (2%)

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           S+  DG  +S+     L   L    E  T +  F+E+   G+   ++T SI++   C   
Sbjct: 116 SMFPDGFTYSI-----LFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG 170

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
              +A +V++ +   G  P    +  L+N  C+   L+ A  + +QM     +P+  TYN
Sbjct: 171 KVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 230

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+ GLC +  V +A +++M ++  G+ P V T+  ++D +   G+  +   +L++  ++
Sbjct: 231 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 290

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           G+  +V++F ++   +CK G   + V +L  M  ++  P+   Y+++++  ++ G    A
Sbjct: 291 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQA 350

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
             + ++M   G        N LL+GLC  S      +++A ++   +  +    D  +Y 
Sbjct: 351 FLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ-----IDEAEELIYTLRNQGLRPDVVSYN 405

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            +I        TD+AL  L    + G  P   T++ ++ AL   G++     L   M   
Sbjct: 406 TIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 465

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
              PS + Y +++    + E      +L     ++G+
Sbjct: 466 NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 128/260 (49%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+   ++K G + SV  FN L+ A     + E      S+    G+  +  +F  +++ +
Sbjct: 247 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 306

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      EA  ++D M      PN   +  ++++  +SG  ++A  ++++M   G   +I
Sbjct: 307 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI 366

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN LLKGLC   +++EA E++  ++N GL+PDV +Y  ++   C  G +++A+ELL E
Sbjct: 367 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 426

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             + G+ P + T++TL +     G       L + M  +N  P    Y  +++  ++   
Sbjct: 427 MNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 486

Query: 311 IRPAVSIFKEMVRFGFEVDE 330
                S+ KEM   G   D+
Sbjct: 487 DSKVASLKKEMSEKGIAFDD 506



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/227 (21%), Positives = 107/227 (47%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L++   +   +++ G    V  F  ++ A     +   AV    +     +APN+  
Sbjct: 274 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 333

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  Y    D  +A  +++ M ++G   ++ T+ +L+  LC+S ++ EA E++  + 
Sbjct: 334 YNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 393

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G +P++ +YN ++   C  G  ++A E+L  +   G++P + TY  ++      GR +
Sbjct: 394 NQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVH 453

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           +   L  + + + V P+   +  + + Y +     K   L K M ++
Sbjct: 454 DMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEK 500



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/196 (20%), Positives = 95/196 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + I D +       +   +N ++ A +   + E A     +  + G++ +  
Sbjct: 308 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIV 367

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++++  C  +   EA ++I  + + G  P+V ++  ++++ C  G   +ALE+L +M
Sbjct: 368 TYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 427

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G +P ++TY+ L+  L   GRV +   +   + +  ++P    Y  ++D + +    
Sbjct: 428 NKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEND 487

Query: 242 NEAMELLNEAIERGVT 257
           ++   L  E  E+G+ 
Sbjct: 488 SKVASLKKEMSEKGIA 503



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 67/137 (48%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I++   ++   + + +K  G + S+  +N LL  L   ++ + A +      + GL P+ 
Sbjct: 342 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 401

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++ +I   CNK D  +A +++  M   G  P + T+  LV++L  +GR+ +   +  Q
Sbjct: 402 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 461

Query: 181 MGRIGCKPNIQTYNCLL 197
           M     +P+   Y  ++
Sbjct: 462 MLHKNVEPSSSIYGIMV 478



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 35/139 (25%)

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI---------------- 412
           D  +Y +VI  L +  K  +AL      ++MG +P  IT+N +I                
Sbjct: 15  DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74

Query: 413 -------------------QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
                                LC  G++D+  +L+  M  H+  P   +Y +L   L + 
Sbjct: 75  DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 454 EKSYDACALYGAALKQGVI 472
            +S    +L+  +LK+GV+
Sbjct: 135 GESRTMLSLFAESLKKGVM 153


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 205/443 (46%), Gaps = 43/443 (9%)

Query: 68  ERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           E +D F  +++  G    +  +N LL A +  N  E A  F +   + G+ PN  T++I+
Sbjct: 96  EALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNIL 155

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG- 185
           I+    K  F EA+ ++D M+     P+V ++  ++N + KSG L  ALEV D+M   G 
Sbjct: 156 IKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGL 215

Query: 186 -----------------------------------CKPNIQTYNCLLKGLCYVGRVEEAY 210
                                                PN+ TYN ++ GLC +GR +E+ 
Sbjct: 216 VPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESL 275

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           EM   +K +  + D++TY++++ G C VG  + A+E+  E ++R V  +VVT+N L NG+
Sbjct: 276 EMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGF 335

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+ G   +   L  +M K NC  + +SY+  + GL +  K+  A+S+++ + R G   D 
Sbjct: 336 CRAGKIKESFELWVMMGKENC-HNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADS 394

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                L+ GLC     +   L  A ++ ++        D   Y  ++  L K  + DEAL
Sbjct: 395 TTYGVLIHGLC-----KNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEAL 449

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             +H   + G        N +I       K+++A+     M      P+  SY+ LI  L
Sbjct: 450 GIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGL 509

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            + E+  DA +     L++   P
Sbjct: 510 CKAERFSDAYSFVKEMLEKDWKP 532



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 206/454 (45%), Gaps = 65/454 (14%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +  ++  +V   +  +A++ F E    GL P+   ++IMI  +  + D+ + +++ +
Sbjct: 184 VYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWE 243

Query: 145 CMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
            +      +PNV T+ +++N LCK GR  E+LE+ ++M +  C+ ++ TY+ L+ GLC V
Sbjct: 244 RLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDV 303

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL---------------- 247
           G V+ A E+   +    +  DV TY A+++GFC+ G+  E+ EL                
Sbjct: 304 GNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYN 363

Query: 248 -----------LNEAI-------ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
                      + EAI        RG   +  T+  L +G CK G   K + +LK  K  
Sbjct: 364 IFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDG 423

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
               D  +YS++++GL K G++  A+ I  +M ++G E+   + N L+ G    S  E+ 
Sbjct: 424 GDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEA 483

Query: 350 L------------------------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           +                                DAY   ++M +K    D  TY +++  
Sbjct: 484 ICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDG 543

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           L +GKK D AL      +  G  P     N ++  LC  GKI+ ALLL   M +   +P+
Sbjct: 544 LCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPN 603

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +++ L+  L +  +   A  ++    K G  P
Sbjct: 604 LVTHNTLMDGLYKARECEMASVIWACMFKNGFQP 637



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/427 (23%), Positives = 203/427 (47%), Gaps = 41/427 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K     E +++++ +KK+     +  ++ L+  L  +   + AV+ + E     +  +  
Sbjct: 267 KMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVV 326

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  +C      E+ ++   M     H NV ++ I +  L ++ +++EA+ V + +
Sbjct: 327 TYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELL 385

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G   +  TY  L+ GLC  G + +A ++L   K+ G K D + Y++++DG  K GR 
Sbjct: 386 RRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRV 445

Query: 242 NEAMEL----------------------------LNEAI-------ERGVTPNVVTFNTL 266
           +EA+ +                            L EAI        +G +P VV++NTL
Sbjct: 446 DEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTL 505

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            NG CK          +K M +++  PD I+YS L++GL +  KI  A++++++++  G 
Sbjct: 506 INGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGL 565

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           E D  M N L+ GLC         +EDA  ++  M +   + +  T+  ++  L K ++ 
Sbjct: 566 EPDVTMHNILMHGLC-----SAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKAREC 620

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           + A +      + G  P  I++N  ++ LC  G+I   + L     ++  +P+  ++ +L
Sbjct: 621 EMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYIL 680

Query: 447 ITKLDQL 453
           +  + +L
Sbjct: 681 VRAVLKL 687



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 120/250 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + I   + K G   S    N L+   V  ++ E A+ FF E  + G +P   
Sbjct: 441 KQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVV 500

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +I   C    F +A   +  M +  + P++ T+++L++ LC+  ++  AL +  Q+
Sbjct: 501 SYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQV 560

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P++  +N L+ GLC  G++E+A  +  N+K     P++ T+  +MDG  K    
Sbjct: 561 LVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKAREC 620

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A  +     + G  P+++++N    G C  G    G+ L     K   LP  I++  L
Sbjct: 621 EMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYIL 680

Query: 302 LNGLLKWGKI 311
           +  +LK G +
Sbjct: 681 VRAVLKLGPL 690



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 103/214 (48%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++AS L+E I  F  ++  G + +V  +N L+  L        A  F  E       P+ 
Sbjct: 475 VRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDM 534

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+S+++   C       A  +   +   G  P+VT   IL++ LC +G++++AL +   
Sbjct: 535 ITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSN 594

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M +  C PN+ T+N L+ GL      E A  +   +  +G +PD+ +Y   + G C  GR
Sbjct: 595 MKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGR 654

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            ++ + L ++A++ G+ P  +T+  L     K G
Sbjct: 655 ISDGIALFDDALKNGILPTSITWYILVRAVLKLG 688


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 208/433 (48%), Gaps = 25/433 (5%)

Query: 36  SLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMA 94
           +++ A++  L+    + +A  F     A    E ++ F  ++ + G   +   +N +L  
Sbjct: 126 AIADAQAAGLQPPTAAFEALIFA-HASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRV 184

Query: 95  LVMLNEQ-ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
           LV        A+  ++   + G  PN  T++++I   C +    +A K+ D M   G  P
Sbjct: 185 LVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITP 244

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           NV T TIL++S+C +G+LKEA  +L  M   GC P+  TYN  L GLC  GRV+EA E L
Sbjct: 245 NVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERL 304

Query: 214 MNVKNDG-LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG-VTPNVVTFNTLFNGYC 271
             +++ G     +  Y+ ++DG    GR  E  +   E +E+  V+P++V +  +  G  
Sbjct: 305 EALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCA 364

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           + G           MK++   PD   Y+TLL  L   G +  A S+  EMVR    +D  
Sbjct: 365 EAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIH 424

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
              +++ GLC     ++ L+++A QVF+ M +        TY ++I  L +  + +EA +
Sbjct: 425 TYTTMIIGLC-----KEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARM 479

Query: 392 HLHHAIEMGHIPRTI--------------TFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
            L + +E+G+ P                 T   +++++C  G++ KA  LL  + +   +
Sbjct: 480 -LFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVV 538

Query: 438 PSRTSYDMLITKL 450
           P   +Y+ L+  L
Sbjct: 539 PDVVTYNTLLNGL 551



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 191/427 (44%), Gaps = 22/427 (5%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A PL   + +++ +   G   + + +N L+  L        A+K F E  S G+ PN  T
Sbjct: 191 AVPLA--LALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKT 248

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
            +I++   CN     EA  ++  M D G  P+  T+   ++ LCK+GR+ EA+E L+ + 
Sbjct: 249 HTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALR 308

Query: 183 RIGC-KPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-KNDGLKPDVYTYTAVMDGFCKVGR 240
             G     ++ Y+CL+ GL   GR EE ++  M V +   + PD+  YT ++ G  + GR
Sbjct: 309 HTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGR 368

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           +N+A    +E  E+G TP+   +NTL    C  G       L+  M + N + D  +Y+T
Sbjct: 369 TNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTT 428

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++ GL K   +  A+ +F  MV  G        N L+ GL          LE+A  +F K
Sbjct: 429 MIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGL-----YRAHRLEEARMLFYK 483

Query: 361 MT-------------KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           M                  V D  T   ++ ++ +  +  +A   L   I+ G +P  +T
Sbjct: 484 MEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVT 543

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N ++  LC    +D AL L   +          +Y  LI  L +  +  DA  L+   L
Sbjct: 544 YNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDIL 603

Query: 468 KQGVIPQ 474
             G  P 
Sbjct: 604 HSGGTPS 610



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 132/252 (52%), Gaps = 15/252 (5%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A  FF E    G  P+++ ++ +++  C+  D   AR ++  M  N    ++ T+T ++ 
Sbjct: 372 AFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMII 431

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK   + EA++V D M  +GC P++ TYN L+ GL    R+EEA  ML      G  P
Sbjct: 432 GLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEA-RMLFYKMEVGNNP 490

Query: 224 DVY--------------TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            ++              T   +++  C+ G+  +A +LL   I+ GV P+VVT+NTL NG
Sbjct: 491 SLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNG 550

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            CK       + L + ++ +    D+I+Y TL++ LL+  +   A+++F++++  G    
Sbjct: 551 LCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPS 610

Query: 330 ERMMNSLLRGLC 341
             + NS++R LC
Sbjct: 611 MPIYNSMMRSLC 622



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 168/370 (45%), Gaps = 25/370 (6%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FD +K+ G       +N LL AL    + + A    SE     +  +  T++ MI   C 
Sbjct: 376 FDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCK 435

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI-- 190
           +    EA +V D M + G HP+V T+ +L++ L ++ RL+EA  +  +M  +G  P++  
Sbjct: 436 EQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFL 494

Query: 191 ------------QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
                       +T   L++ +C  G+V +AY++L  + + G+ PDV TY  +++G CKV
Sbjct: 495 RLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKV 554

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
              + A+ L  E   +G   + +T+ TL +   +       + L + +      P    Y
Sbjct: 555 RNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIY 614

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE---EKDLLEDAY 355
           ++++  L +  K+  A++++       F+   R  N L +   + S     E+  L +A 
Sbjct: 615 NSMMRSLCRMQKLSQAINLW-------FDHLPRKYNLLAQDEVISSARKKFEEGCLHEAV 667

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           +   K+ ++    +   Y I +  L +  + ++AL   H   E G         ++ + L
Sbjct: 668 RELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYL 727

Query: 416 CGEGKIDKAL 425
           C EG +  A+
Sbjct: 728 CLEGNLGAAV 737



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/334 (20%), Positives = 130/334 (38%), Gaps = 69/334 (20%)

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME----------------------- 246
           Y+ + + +  GL+P    + A++      GR +EA+E                       
Sbjct: 124 YDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLR 183

Query: 247 --------------LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                         L N  +  G  PN  T+N L +G CK GTP+  + L   M  R   
Sbjct: 184 VLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGIT 243

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-- 350
           P+  +++ LL+ +   G+++ A ++   M   G   DE   N+ L GLC     ++ +  
Sbjct: 244 PNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIER 303

Query: 351 -----------------------------LEDAYQVFEKMTKKVSVT-DPGTYGIVIRTL 380
                                         E+ +Q + ++ ++  V+ D   Y I+IR  
Sbjct: 304 LEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGC 363

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            +  +T++A        E G  P T  +N +++ALC  G +D A  L+  M  +  +   
Sbjct: 364 AEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDI 423

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            +Y  +I  L + +   +A  ++   ++ G  P 
Sbjct: 424 HTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPS 457



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 128/295 (43%), Gaps = 20/295 (6%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP------- 118
           + E + +FD + + G + SV  +N L+  L   +  E A   F +    G  P       
Sbjct: 439 VDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKME-VGNNPSLFLRLT 497

Query: 119 -------NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
                  +S T   ++   C      +A K++  + D+G  P+V T+  L+N LCK   L
Sbjct: 498 LGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNL 557

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
             AL +  ++   G   +  TY  L+  L    R  +A  +  ++ + G  P +  Y ++
Sbjct: 558 DGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSM 617

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK---EGTPMKGVGLLKLMKK 288
           M   C++ + ++A+ L  + + R    N++  + + +   K   EG   + V  L  + +
Sbjct: 618 MRSLCRMQKLSQAINLWFDHLPRKY--NLLAQDEVISSARKKFEEGCLHEAVRELIKIDQ 675

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
                +   Y+  L GL++ G+I  A+ IF  +   G ++       L + LC++
Sbjct: 676 EYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLE 730


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 199/412 (48%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  L E     + + K+  + S+  ++  +  L+ L + + A     E S  G  PN  
Sbjct: 303 KSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEV 362

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  YC   +  EA K+ D M   G  PN  T   L+   CKS ++ +A  VL++M
Sbjct: 363 VYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEM 422

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   N  +++ ++  LC   R   A   +  +    L+P+    T ++ G CK G+ 
Sbjct: 423 IGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQ 482

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA+EL    + +G  PN+VT N L +G CK G   + + LL+ M +R  + D+I+Y+TL
Sbjct: 483 GEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTL 542

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K GK++    + +EMV+ G + D    N LL GLC       D +++A +++ + 
Sbjct: 543 ISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLC-----NADKIDEASRLWHEC 597

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K   V +  TYG++I    K  K +E    L+  +       ++ +N++I+A C  G +
Sbjct: 598 KKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNM 657

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + A  L   M     + S  +Y  L+  L  +    DA  L     K+G++P
Sbjct: 658 NAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLP 709



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 199/403 (49%), Gaps = 5/403 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+F  + K G   S+     LL +LV  NE + + + +      G+ P+   FS MI  +
Sbjct: 207 DVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAF 266

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C  +   +A  +   M   G  PNV T+  +++ LCKSGRL EA    ++M +    P++
Sbjct: 267 CKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSL 326

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY+  + GL  + +++EA  +L  +   G  P+   Y  ++DG+CK+G  +EA+++ ++
Sbjct: 327 ITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDD 386

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + +G++PN VT N+L  G+CK     +   +L+ M  R    ++ S+S ++N L    +
Sbjct: 387 MLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFR 446

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
              A+   +EM+      ++ ++ +L+ GLC    +      +A +++ ++  K  V + 
Sbjct: 447 FVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQ-----GEAVELWCRLLGKGFVPNI 501

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            T   +I  L K     E L  L   +E G +   IT+N +I   C EGK+ +   L   
Sbjct: 502 VTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEE 561

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M +    P   ++++L+  L   +K  +A  L+    K G +P
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVP 604



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 170/362 (46%), Gaps = 5/362 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  L    +Q  AV+ +      G  PN  T + +I   C   +  E  K++  M + G
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERG 531

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +  T+  L++  CK G++KE  E+ ++M + G +P+I T+N LL GLC   +++EA 
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEAS 591

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +    K +G  P+VYTY  ++DG+CK  +  E   LLNE + + +  N V +N+L   Y
Sbjct: 592 RLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAY 651

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C  G       L   MK R  L    +YS+L++GL   G +  A  +  EM + G   + 
Sbjct: 652 CINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNV 711

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +++ G     + +   +     V ++M+      +  TY I+I    K  KT EA 
Sbjct: 712 VCYTTIIGG-----YSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAA 766

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             L+   E G +P  +T+N     LC EGK+++A  +   M   A      +Y  LI   
Sbjct: 767 KLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGC 826

Query: 451 DQ 452
            Q
Sbjct: 827 HQ 828



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 191/412 (46%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + I D +   G + +    N L+      ++   A     E    GL  N  
Sbjct: 373 KMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQG 432

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +FS++I   C K  F  A   I  M      PN    T LV+ LCK+G+  EA+E+  ++
Sbjct: 433 SFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRL 492

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PNI T N L+ GLC  G ++E  ++L ++   GL  D  TY  ++ G CK G+ 
Sbjct: 493 LGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKV 552

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            E  EL  E +++G+ P++ TFN L +G C      +   L    KK   +P+  +Y  +
Sbjct: 553 KEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVM 612

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K  K+    ++  E+V    E++  + NSL+R  C+        +  A+++ + M
Sbjct: 613 IDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGN-----MNAAFRLRDDM 667

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +  +    TY  ++  L      D+A   L    + G +P  + +  +I      G++
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQM 727

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +K  ++L  M  H   P++ +Y ++I    +L K+ +A  L     ++G++P
Sbjct: 728 NKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILP 779



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 181/370 (48%), Gaps = 5/370 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   FS  +  GL P+  T + ++      N+  ++ +V D +   G  P+V  F+ ++N
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           + CK  R  +A+ +  +M ++G  PN+ TYN ++ GLC  GR++EAY     +  + + P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            + TY+  ++G  K+ + +EA  +L E  E G  PN V +NTL +GYCK G   + + + 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M  +   P+ ++ ++L+ G  K  +I  A ++ +EM+  G  +++   + ++  LC+K
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLK 444

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                     A     +M  +    + G    ++  L K  K  EA+      +  G +P
Sbjct: 445 FR-----FVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVP 499

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             +T N +I  LC  G + + L LL  M E   +  R +Y+ LI+   +  K  +   L 
Sbjct: 500 NIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELK 559

Query: 464 GAALKQGVIP 473
              +K+G+ P
Sbjct: 560 EEMVKKGIQP 569



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 192/387 (49%), Gaps = 5/387 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA+ LK+  +++D I   G    V  F+ ++ A    + ++ A+  FS+    G+APN 
Sbjct: 232 VKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNV 291

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I   C      EA +  + M      P++ T+++ +N L K  ++ EA  VL +
Sbjct: 292 VTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKE 351

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M  +G  PN   YN L+ G C +G + EA ++  ++ + G+ P+  T  +++ GFCK  +
Sbjct: 352 MSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQ 411

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  +L E I RG+  N  +F+ + N  C +   +  +  ++ M  RN  P+    +T
Sbjct: 412 IGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTT 471

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL K GK   AV ++  ++  GF  +    N+L+ GLC     +   +++  ++   
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLC-----KAGNMQETLKLLRD 526

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++  V D  TY  +I    K  K  E        ++ G  P   TFN ++  LC   K
Sbjct: 527 MLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADK 586

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
           ID+A  L     ++  +P+  +Y ++I
Sbjct: 587 IDEASRLWHECKKNGYVPNVYTYGVMI 613



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 137/278 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE  ++ + + K G    +  FN LL  L   ++ + A + + E    G  PN +
Sbjct: 548 KEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVY 607

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ +MI  YC  N   E   +++ +       N   +  L+ + C +G +  A  + D M
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +  TY+ L+ GLC +G V++A  +L  ++ +GL P+V  YT ++ G+ K+G+ 
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQM 727

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           N+   +L E     + PN  T+  + +G+CK G   +   LL  M ++  LPD ++Y+  
Sbjct: 728 NKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAF 787

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
            NGL K GK+  A  +  EM      +DE    +L+ G
Sbjct: 788 TNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 160/316 (50%), Gaps = 5/316 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++E + +   + + G  +    +N L+       + +   +   E    G+ P+ +
Sbjct: 513 KAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIY 572

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF++++   CN +   EA ++      NGY PNV T+ ++++  CK+ +++E   +L+++
Sbjct: 573 TFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNEL 632

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                + N   YN L++  C  G +  A+ +  ++K+ G+     TY+++M G C +G  
Sbjct: 633 VSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLV 692

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A  LL+E  + G+ PNVV + T+  GY K G   K   +L+ M   N  P+K +Y+ +
Sbjct: 693 DDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIM 752

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K GK + A  +  EM   G   D    N+   GLC     ++  +E+A++V ++M
Sbjct: 753 IDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLC-----KEGKVEEAFKVCDEM 807

Query: 362 TKKVSVTDPGTYGIVI 377
           +      D  TY  +I
Sbjct: 808 SSGAVCLDEITYTTLI 823



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 162/340 (47%), Gaps = 5/340 (1%)

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           F  A  V   +   G  P++ T T L++SL K+  LK++ EV D +   G  P++  ++ 
Sbjct: 202 FGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFST 261

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           ++   C   R ++A  +   ++  G+ P+V TY  ++ G CK GR +EA     + ++  
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           V+P+++T++   NG  K     +   +LK M +   +P+++ Y+TL++G  K G I  A+
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEAL 381

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            I  +M+  G   +   +NSL++G C     + D +  A  V E+M  +    + G++ +
Sbjct: 382 KIRDDMLSKGISPNSVTLNSLIQGFC-----KSDQIGQAENVLEEMIGRGLPINQGSFSM 436

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           VI  L    +   AL  +   +     P       ++  LC  GK  +A+ L   +    
Sbjct: 437 VINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKG 496

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            +P+  + + LI  L +     +   L    L++G++  R
Sbjct: 497 FVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDR 536


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 201/428 (46%), Gaps = 19/428 (4%)

Query: 52  LQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA 111
           LQ  RF D ++   LKE       +K+ G    +  +N L++ L      + A  F  E 
Sbjct: 463 LQNSRFGDAMRV--LKE-------MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
              GL PN++T+   I  Y   ++F  A K +  M + G  PN    T L+N  CK  ++
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKV 573

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
            EA      M   G   + +TY  L+ GL    +V++A E+   ++  G+ PDV++Y  +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           ++GF K+G   +A  + +E +E G+TPNV+ +N L  G+C+ G   K   LL  M  +  
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            P+ ++Y T+++G  K G +  A  +F EM   G   D  +  +L+ G C       + +
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC-----RLNDV 748

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD---EALIHLHH-AIEMGHIPRTIT 407
           E A  +F    KK   +    +  +I  + K  KT+   E L  L   + +    P  +T
Sbjct: 749 ERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I  LC EG ++ A  L   M     +P+  +Y  L+   D++ +  +   ++  A+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867

Query: 468 KQGVIPQR 475
             G+ P  
Sbjct: 868 AAGIEPDH 875



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 162/357 (45%), Gaps = 6/357 (1%)

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T+  +++  C+  D   A  ++  M  +G  PNV  +T L+ +  ++ R  +A+ VL +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P+I  YN L+ GL    R++EA   L+ +  +GLKP+ +TY A + G+ +   
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A + + E  E GV PN V    L N YCK+   ++     + M  +  L D  +Y+ 
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NGL K  K+  A  IF+EM   G   D      L+ G     + +   ++ A  +F++
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING-----FSKLGNMQKASSIFDE 652

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++    +   Y +++    +  + ++A   L      G  P  +T+  +I   C  G 
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
           + +A  L   M     +P    Y  L+    +L     A  ++G   K+G      P
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAP 768



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 171/398 (42%), Gaps = 48/398 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E    + S+   G       +  L+  L   ++ + A + F E    G+AP+ +
Sbjct: 569 KKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++ ++I  +    +  +A  + D M + G  PNV  + +L+   C+SG +++A E+LD+M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC----- 236
              G  PN  TY  ++ G C  G + EA+ +   +K  GL PD + YT ++DG C     
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 237 -----------------------------KVGRSNEAMELLNE----AIERGVTPNVVTF 263
                                        K G++    E+LN     + +R   PN VT+
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N + +  CKEG       L   M+  N +P  I+Y++LLNG  K G+      +F E + 
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI-----VIR 378
            G E D  M + ++     +    K L+     + ++M  K +V D     I     ++ 
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALV-----LVDQMFAKNAVDDGCKLSISTCRALLS 923

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
              K  + + A   + + + + +IP + T   +I   C
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 153/327 (46%), Gaps = 45/327 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++   IFD + ++G   +V  +N LL       E E A +   E S  GL PN+ 
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL------ 175
           T+  +I  YC   D  EA ++ D M   G  P+   +T LV+  C+   ++ A+      
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758

Query: 176 ----------------------------EVLDQM-----GRIGCKPNIQTYNCLLKGLCY 202
                                       EVL+++      R G KPN  TYN ++  LC 
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCK 817

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            G +E A E+   ++N  L P V TYT++++G+ K+GR  E   + +EAI  G+ P+ + 
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD--KISYST---LLNGLLKWGKIRPAVSI 317
           ++ + N + KEG   K + L+  M  +N + D  K+S ST   LL+G  K G++  A  +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKS 344
            + MVR  +  D   +  L+   C+ S
Sbjct: 938 MENMVRLQYIPDSATVIELINESCISS 964



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 155/338 (45%), Gaps = 5/338 (1%)

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A K+ + M   G  P   T+ +L++ LCK  RL++A  +L +M  +G   +  TY+ L+ 
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GL      + A  ++  + + G+    Y Y   +    K G   +A  L +  I  G+ P
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
               + +L  GYC+E    +G  LL  MKKRN +    +Y T++ G+   G +  A +I 
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           KEM+  G   +  +  +L+     K++ +     DA +V ++M ++    D   Y  +I 
Sbjct: 441 KEMIASGCRPNVVIYTTLI-----KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L K K+ DEA   L   +E G  P   T+   I       +   A   +  M E   +P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           ++     LI +  + EK  +AC+ Y + + QG++   K
Sbjct: 556 NKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAK 593



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 166/386 (43%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L  +   E A     E  S G++ ++ T+S++I       +   A+ ++  M 
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G +     +   +  + K G +++A  + D M   G  P  Q Y  L++G C    V 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           + YE+L+ +K   +    YTY  V+ G C  G  + A  ++ E I  G  PNVV + TL 
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             + +       + +LK MK++   PD   Y++L+ GL K  ++  A S   EMV  G +
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N+   G  +  + E      A +  ++M +   + +      +I    K +K  
Sbjct: 520 P-----NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVI 574

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA       ++ G +    T+  ++  L    K+D A  +   M      P   SY +LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +L     A +++   +++G+ P
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTP 660



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 154/359 (42%), Gaps = 5/359 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL P  +T+ ++I   C      +A+ ++  M   G   +  T+++L++ L K      A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
             ++ +M   G       Y+C +  +   G +E+A  +   +   GL P    Y ++++G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           +C+     +  ELL E  +R +  +  T+ T+  G C  G       ++K M    C P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            + Y+TL+   L+  +   A+ + KEM   G   D    NSL+ GL      +   +++A
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL-----SKAKRMDEA 506

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
                +M +     +  TYG  I    +  +   A  ++    E G +P  +    +I  
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            C + K+ +A      M +   +    +Y +L+  L + +K  DA  ++     +G+ P
Sbjct: 567 YCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 86/380 (22%), Positives = 152/380 (40%), Gaps = 26/380 (6%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G + +   F I+   Y  K    EA  V          P ++   +L+++L +  RL   
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND--------------- 219
            +V   M       +++TY+ L+   C  G V+   ++L   + +               
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 220 ------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
                 GL P  YTY  ++DG CK+ R  +A  LL E    GV+ +  T++ L +G  K 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
                  GL+  M           Y   +  + K G +  A ++F  M+  G     +  
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            SL+ G C     EK++ +  Y++  +M K+  V  P TYG V++ +      D A   +
Sbjct: 386 ASLIEGYC----REKNVRQ-GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
              I  G  P  + +  +I+      +   A+ +L  M E    P    Y+ LI  L + 
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500

Query: 454 EKSYDACALYGAALKQGVIP 473
           ++  +A +     ++ G+ P
Sbjct: 501 KRMDEARSFLVEMVENGLKP 520



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 110/291 (37%), Gaps = 37/291 (12%)

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-------------------GVTPNVVT 262
           K D +++ A+    C  G   +A+ ++   IER                   G + + V 
Sbjct: 96  KLDSFSFLAL--DLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVL 153

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           F  LF+GY  +G   + V +         +P       LL+ LL+W ++     ++K MV
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEE--KDLL--------------EDAYQVFEKMTKKVS 366
                 D +  + L+   C     +  KD+L              + A ++ E M  K  
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           V    TY ++I  L K K+ ++A   L     +G      T++ +I  L      D A  
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
           L+  M  H        YD  I  + +      A AL+   +  G+IPQ + 
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 218/467 (46%), Gaps = 53/467 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++   +F+ ++  G + +V  +  L+ A +   +   A   F      G  PN  
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394

Query: 122 TFSIMIRCYCNKNDFFEARKV----------------IDCMFDNGYHPNVTTFTILVNSL 165
           T+  ++   C   +  +A +V                  C   +   PNV T+  LV+ L
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 454

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK+ ++  A E+LD M   GC+PN   Y+ L+ G C  G+++ A E+ + +   G  P V
Sbjct: 455 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV 514

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           +TYT+++D   K GR + AM++L++ ++   TPNVVT+  + +G C+ G   K + LL L
Sbjct: 515 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSL 574

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M+++ C P+ ++Y+ L++GL K GKI  ++ +F +M R G   +      L+  LC    
Sbjct: 575 MEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGL 634

Query: 346 EEKD--LLEDAYQ--------------------------VFEKMTKKVSVTDPGTYGIVI 377
            +K   LL +  Q                          + E+M    +V     YG++I
Sbjct: 635 LDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLI 694

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN-----VIQALCGEGKIDKALLLLFLMY 432
               K  + + A+  LH   EM  +P ++  +N     +IQALC   ++++A  L   M 
Sbjct: 695 DCFSKAGRLEIAM-ELHK--EMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 751

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACAL-YGAALKQGVIPQRKPQ 478
               +P  + +  LI  L +++K  +A  L YG   + G++     Q
Sbjct: 752 RRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEVGLLLSYTTQ 798



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 176/373 (47%), Gaps = 31/373 (8%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
           +F     + LAPN  T+  ++   C  +    A +++D M  +G  PN   +  L++  C
Sbjct: 431 YFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFC 490

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K+G++  A EV  QM + G  P++ TY  L+  +   GR++ A ++L  +  D   P+V 
Sbjct: 491 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVV 550

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYTA++DG C++G S +A++LL+   E+G +PNVVT+  L +G  K G     + L   M
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 610

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF--------------GFE----- 327
            ++ C P+ ++Y  L+N L   G +  A  +  EM +               GF      
Sbjct: 611 SRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA 670

Query: 328 ---VDERMMN------SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV--TDPGTYGIV 376
              + E M +      + + G+ +  + +   LE A ++ ++M +  S   TD   Y  +
Sbjct: 671 SLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASL 730

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF-LMYEHA 435
           I+ L    + +EA          G +P    F  +I+ L    K D+AL L + + +E  
Sbjct: 731 IQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEVG 790

Query: 436 KIPSRTSYDMLIT 448
            + S T+   L T
Sbjct: 791 LLLSYTTQIFLFT 803



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 193/454 (42%), Gaps = 52/454 (11%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I + +  +G N + S FN L+ +     +   A K  +  ++ G  P    ++I I   C
Sbjct: 164 IINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC 223

Query: 132 NKN-----DFFE-ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +      D  + A K+   M       N          LC  G+  +A +++ +M R G
Sbjct: 224 GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG 283

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY+ ++  LC+  +VE+A+ +   +K  G+ PDVYTYT ++D FCK G   +A 
Sbjct: 284 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 343

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  E    G +P VVT+  L + Y K     +   +   M    C P+ ++Y  L++GL
Sbjct: 344 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 403

Query: 306 LKWGKIRPAVSIFKEMV--------RFGFEVDER--------MMNSLLRGLC-------- 341
            K G I  A  ++ +++         F F  ++R           +L+ GLC        
Sbjct: 404 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 463

Query: 342 ----------------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
                                 +  + +   ++ A +VF +MTK   +    TY  +I  
Sbjct: 464 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDR 523

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           + K  + D A+  L   ++    P  +T+  +I  LC  G+ +KAL LL LM E    P+
Sbjct: 524 MFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPN 583

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y  LI  L +  K   +  L+    ++G  P
Sbjct: 584 VVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 617



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/437 (23%), Positives = 176/437 (40%), Gaps = 62/437 (14%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D  D I+++           ++  L+  +  + A+ F          PN  T+  ++  +
Sbjct: 93  DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 152

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             K      +++I+ M   G +PN + F  LV+S C       A ++L++M   GC P  
Sbjct: 153 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 212

Query: 191 QTY--------------------------------NCLL---------KGLCYVGRVEEA 209
             Y                                NC+L         + LC VG+ ++A
Sbjct: 213 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 272

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
           ++++  +   G  PD  TY+ V+   C   +  +A  L  E    GVTP+V T+  L + 
Sbjct: 273 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 332

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           +CK G   +   L + M+   C P  ++Y+ L++  LK  ++  A  IF  MV  G   +
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG----------------TY 373
           +    +L+ GLC     +   +  A++V+ K+       D                  TY
Sbjct: 393 DVTYGALVDGLC-----KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
           G ++  L K  K D A   L   +  G  P  I ++ +I   C  GKID A  +   M +
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 434 HAKIPSRTSYDMLITKL 450
              +PS  +Y  LI ++
Sbjct: 508 CGYLPSVHTYTSLIDRM 524



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 145/340 (42%), Gaps = 14/340 (4%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           +G  P+  T++ +++   +        +V   M ++G+  +  T     ++LCK GR  +
Sbjct: 34  FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWAD 93

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           AL++++   R   K +      ++ GL      +EA   L  ++ +   P+V TY  ++ 
Sbjct: 94  ALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           GF K  +      ++N  +  G  PN   FN+L + YC E        LL  M    C P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 294 DKISYSTLLNGLLKWGKIRP------AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
             + Y+  +  +    K+        A  I+ EM+     +++  + +  R LC     +
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           K     A+Q+ ++M +K  V D  TY  VI  L    K ++A +       +G  P   T
Sbjct: 271 K-----AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +  +I + C  G I++A  L   M      P+  +Y  LI
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 365



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 20/304 (6%)

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D +   G +P+  TYN L++ L   G+V+  + +   +   G   D +T        CK 
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 239 GRSNEAMELLNEAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           GR  +A+++    IER     + V    + +G  +     + +  L  M+  +C+P+ ++
Sbjct: 89  GRWADALDM----IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y TLL+G LK  ++     I   M+  G   +  + NSL+   C     EKD    AY++
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYC----NEKDYAY-AYKL 199

Query: 358 FEKMTKKVSVTDPG--TYGIVIRTL-GKGKKTDEALIHLHHAIEMGHIPRTITFN----- 409
             +MT       PG   Y I I ++ G+ K     L+ L   I    +      N     
Sbjct: 200 LNRMT--TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVA 257

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           N  + LCG GK DKA  L+  M     +P  ++Y  +IT L    K   A  L+      
Sbjct: 258 NFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMV 317

Query: 470 GVIP 473
           GV P
Sbjct: 318 GVTP 321


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 190/386 (49%), Gaps = 48/386 (12%)

Query: 95  LVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE-ARKVIDCMFDNGYHP 153
           LV  N  + A+ F+ E    G+ P   + +I+I+  C   +  E A ++   M + G  P
Sbjct: 130 LVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQP 189

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           +  T+  L+N LCK G++ +A E+LD+M   G  P++ +Y  L+ GLC    ++EA E+L
Sbjct: 190 DSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELL 249

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +  +G++P+V+TY+++MDG CK G S++AMELL   + R + PN+VT++TL NG CKE
Sbjct: 250 EEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKE 309

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV-------RFGF 326
           G   + V +L  M+ +   PD   Y  +++GL      + A +   EM        R  +
Sbjct: 310 GKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASW 369

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
               +M N +++GLC      +     A+Q++  M          T GI           
Sbjct: 370 TFHVKMHNMVVQGLCNNVDPTR-----AFQLYLSMR---------TRGI----------- 404

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
                    ++E+G      TF+ +++  C  G ++KA  +L  M     IP    +++L
Sbjct: 405 ---------SVEIG------TFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVL 449

Query: 447 ITKLDQLEKSYDACALYGAALKQGVI 472
           +  L   +K  +   L  A LKQ  +
Sbjct: 450 MCGLWDRKKVRETTELLVAELKQKFV 475



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 143/300 (47%), Gaps = 11/300 (3%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  +   G       +  L+  L  L +   A +   E    GL+P+  +++ +I   C
Sbjct: 178 LFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLC 237

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             N+  EA ++++ M  NG  PNV T++ L++ LCKSG   +A+E+L+ M R    PN+ 
Sbjct: 238 QSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMV 297

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY+ L+ GLC  G+  EA E+L  ++  GLKPD   Y  ++ G C      EA   ++E 
Sbjct: 298 TYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEM 357

Query: 252 IERGVTPNVVTF-------NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
              G++PN  ++       N +  G C    P +   L   M+ R    +  ++  L+  
Sbjct: 358 ALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKC 417

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             K G +  A  I +EM+  G   DE M N L+ GL    W+ K + E    +  ++ +K
Sbjct: 418 FCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGL----WDRKKVRETTELLVAELKQK 473



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 127/264 (48%), Gaps = 7/264 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  ++ D +++ G + SV  +  L+  L   N  + A++   E    G+ PN +
Sbjct: 203 KLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVF 262

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S ++   C      +A ++++ M      PN+ T++ L+N LCK G+ +EA+E+LD+M
Sbjct: 263 TYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRM 322

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT-------AVMDG 234
              G KP+   Y  ++ GLC     +EA   +  +   G+ P+  ++T        V+ G
Sbjct: 323 RLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQG 382

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            C       A +L      RG++  + TF+ L   +CK G   K   +L+ M    C+PD
Sbjct: 383 LCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPD 442

Query: 295 KISYSTLLNGLLKWGKIRPAVSIF 318
           +  ++ L+ GL    K+R    + 
Sbjct: 443 EGMWNVLMCGLWDRKKVRETTELL 466



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 144/330 (43%), Gaps = 6/330 (1%)

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
           + NG+  +  TF  +++ L    + + A  +L++M +  C+     +  + +G   V R 
Sbjct: 42  YSNGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRP 101

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            +A  +   +++  +KP   +Y  V D   +      A+    E  E+G+ P VV+ N L
Sbjct: 102 LDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNIL 161

Query: 267 FNGYCK-EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
               CK E T      L + M  R C PD  +Y TL+NGL K GKI  A  +  EM   G
Sbjct: 162 IKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKG 221

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                    SL+ GLC     + + L++A ++ E+M       +  TY  ++  L K   
Sbjct: 222 LSPSVVSYTSLIHGLC-----QSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGH 276

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           + +A+  L   +    +P  +T++ +I  LC EGK  +A+ +L  M      P    Y  
Sbjct: 277 SSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGR 336

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +I+ L       +A          G+ P R
Sbjct: 337 IISGLCAACNYQEAANFIDEMALGGISPNR 366


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 214/459 (46%), Gaps = 52/459 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++   +F+ ++  G + +V  +  L+ A +   +   A   F      G  PN  
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394

Query: 122 TFSIMIRCYCNKNDFFEARKV----------------IDCMFDNGYHPNVTTFTILVNSL 165
           T+  ++   C   +  +A +V                  C   +   PNV T+  LV+ L
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 454

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK+ ++  A E+LD M   GC+PN   Y+ L+ G C  G+++ A E+ + +   G  P V
Sbjct: 455 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV 514

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           +TYT+++D   K GR + AM++L++ ++   TPNVVT+  + +G C+ G   K + LL L
Sbjct: 515 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSL 574

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M+++ C P+ ++Y+ L++GL K GKI  ++ +F +M R G   +      L+  LC    
Sbjct: 575 MEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGL 634

Query: 346 EEKD--LLEDAYQ--------------------------VFEKMTKKVSVTDPGTYGIVI 377
            +K   LL +  Q                          + E+M    +V     YG++I
Sbjct: 635 LDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLI 694

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN-----VIQALCGEGKIDKALLLLFLMY 432
               K  + + A+  LH   EM  +P ++  +N     +IQALC   ++++A  L   M 
Sbjct: 695 DCFSKAGRLEIAM-ELHK--EMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 751

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
               +P  + +  LI  L +++K  +A  L      +GV
Sbjct: 752 RRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 193/454 (42%), Gaps = 52/454 (11%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I + +  +G N + S FN L+ +     +   A K  +  ++ G  P    ++I I   C
Sbjct: 164 IINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC 223

Query: 132 NKN-----DFFE-ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +      D  + A K+   M       N          LC  G+  +A +++ +M R G
Sbjct: 224 GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG 283

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY+ ++  LC+  +VE+A+ +   +K  G+ PDVYTYT ++D FCK G   +A 
Sbjct: 284 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 343

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  E    G +P VVT+  L + Y K     +   +   M    C P+ ++Y  L++GL
Sbjct: 344 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 403

Query: 306 LKWGKIRPAVSIFKEMV--------RFGFEVDER--------MMNSLLRGLC-------- 341
            K G I  A  ++ +++         F F  ++R           +L+ GLC        
Sbjct: 404 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 463

Query: 342 ----------------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
                                 +  + +   ++ A +VF +MTK   +    TY  +I  
Sbjct: 464 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDR 523

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           + K  + D A+  L   ++    P  +T+  +I  LC  G+ +KAL LL LM E    P+
Sbjct: 524 MFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPN 583

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y  LI  L +  K   +  L+    ++G  P
Sbjct: 584 VVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 617



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/437 (23%), Positives = 176/437 (40%), Gaps = 62/437 (14%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D  D I+++           ++  L+  +  + A+ F          PN  T+  ++  +
Sbjct: 93  DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 152

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             K      +++I+ M   G +PN + F  LV+S C       A ++L++M   GC P  
Sbjct: 153 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 212

Query: 191 QTY--------------------------------NCLL---------KGLCYVGRVEEA 209
             Y                                NC+L         + LC VG+ ++A
Sbjct: 213 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 272

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
           ++++  +   G  PD  TY+ V+   C   +  +A  L  E    GVTP+V T+  L + 
Sbjct: 273 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 332

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           +CK G   +   L + M+   C P  ++Y+ L++  LK  ++  A  IF  MV  G   +
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG----------------TY 373
           +    +L+ GLC     +   +  A++V+ K+       D                  TY
Sbjct: 393 DVTYGALVDGLC-----KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
           G ++  L K  K D A   L   +  G  P  I ++ +I   C  GKID A  +   M +
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 434 HAKIPSRTSYDMLITKL 450
              +PS  +Y  LI ++
Sbjct: 508 CGYLPSVHTYTSLIDRM 524



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 145/340 (42%), Gaps = 14/340 (4%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           +G  P+  T++ +++   +        +V   M ++G+  +  T     ++LCK GR  +
Sbjct: 34  FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWAD 93

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           AL++++   R   K +      ++ GL      +EA   L  ++ +   P+V TY  ++ 
Sbjct: 94  ALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           GF K  +      ++N  +  G  PN   FN+L + YC E        LL  M    C P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 294 DKISYSTLLNGLLKWGKIRP------AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
             + Y+  +  +    K+        A  I+ EM+     +++  + +  R LC     +
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           K     A+Q+ ++M +K  V D  TY  VI  L    K ++A +       +G  P   T
Sbjct: 271 K-----AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +  +I + C  G I++A  L   M      P+  +Y  LI
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 365



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 20/304 (6%)

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D +   G +P+  TYN L++ L   G+V+  + +   +   G   D +T        CK 
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 239 GRSNEAMELLNEAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           GR  +A+++    IER     + V    + +G  +     + +  L  M+  +C+P+ ++
Sbjct: 89  GRWADALDM----IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y TLL+G LK  ++     I   M+  G   +  + NSL+   C     EKD    AY++
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYC----NEKDYAY-AYKL 199

Query: 358 FEKMTKKVSVTDPG--TYGIVIRTL-GKGKKTDEALIHLHHAIEMGHIPRTITFN----- 409
             +MT       PG   Y I I ++ G+ K     L+ L   I    +      N     
Sbjct: 200 LNRMT--TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVA 257

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           N  + LCG GK DKA  L+  M     +P  ++Y  +IT L    K   A  L+      
Sbjct: 258 NFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMV 317

Query: 470 GVIP 473
           GV P
Sbjct: 318 GVTP 321


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 208/453 (45%), Gaps = 71/453 (15%)

Query: 61  IKASPLKERIDIFDSIKKD----GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           +++S  ++++D F  + KD    G +      N L+  L      E A + F +    G 
Sbjct: 123 LESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGC 182

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            PN ++F I++R YC       A +++D M   G  PN   +  L++S C+ GR +EA  
Sbjct: 183 RPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAER 242

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---GL-KPDVYTYTAVM 232
           ++++M   G  P++ T+N  +  LC  G++ EA  +  +++ D   GL +P++ T+  ++
Sbjct: 243 LVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLML 302

Query: 233 DGFCKVGRSNEA-------------MEL----------------------LNEAIERGVT 257
           +GFCK G   EA             MEL                      L E +++G+ 
Sbjct: 303 EGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIE 362

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PN+ +FNT+ +G CK G       ++ LM      PD ++YSTLL+G    GK+  A +I
Sbjct: 363 PNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNI 422

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             EM+R G   +    N LL  L    W+E  + E A ++ +KM ++    D  T  IVI
Sbjct: 423 LHEMMRRGCSPNTYTCNILLHSL----WKEGRIFE-AEKLLQKMNERSYDLDNVTCNIVI 477

Query: 378 RTLGKGKKTDEAL-----IHLHHAIEMGH------------------IPRTITFNNVIQA 414
             L K  K DEA+     + +H +  +G+                  +P  IT++ +I  
Sbjct: 478 DGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIING 537

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           LC  G++D+A      M   +  P    YD  I
Sbjct: 538 LCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFI 570



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 181/362 (50%), Gaps = 15/362 (4%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G++P ++T +++I   C+   F +AR+V D M   G  PN  +F ILV   C++G    A
Sbjct: 146 GVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRA 205

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           LE+LD MG  G +PN   YN L+   C  GR EEA  ++  ++ DGL PDV T+ + +  
Sbjct: 206 LELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISA 265

Query: 235 FCKVGRSNEAMELLNEAI---ERGV-TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
            C  G+  EA  +  +     E G+  PN+ TFN +  G+CKEG   +   L++ MK+  
Sbjct: 266 LCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNG 325

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
            L +  SY+  L GL++ GK+  A    KEMV  G E +    N+++ GLC     +  L
Sbjct: 326 NLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLC-----KNGL 380

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           + DA  +   M       D  TY  ++       K  +A   LH  +  G  P T T N 
Sbjct: 381 ISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNI 440

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT------KLDQLEKSYDACALYG 464
           ++ +L  EG+I +A  LL  M E +      + +++I       KLD+  +  +   ++G
Sbjct: 441 LLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHG 500

Query: 465 AA 466
           +A
Sbjct: 501 SA 502



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 198/431 (45%), Gaps = 32/431 (7%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ D +   G   +   +N L+ +       E A +        GL P+  TF+  I  
Sbjct: 206 LELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISA 265

Query: 130 YCNKNDFFEARKVI-DCMFDNGY---HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            C+     EA ++  D   D       PN+TTF +++   CK G L+EA  +++ M R G
Sbjct: 266 LCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNG 325

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
               +++YN  L GL   G++ EA   L  + + G++P++Y++  VMDG CK G  ++A 
Sbjct: 326 NLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDAR 385

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            ++   I  G+ P+ VT++TL +G C  G  +K   +L  M +R C P+  + + LL+ L
Sbjct: 386 MIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSL 445

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM---- 361
            K G+I  A  + ++M    +++D    N ++ GLC KS +    L++A ++ E M    
Sbjct: 446 WKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLC-KSGK----LDEAVEIVEGMWIHG 500

Query: 362 -------------------TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
                                K  + D  TY I+I  L K  + DEA       +     
Sbjct: 501 SAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLH 560

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P +I ++  I + C  GKI  A  +L  M +     S  +Y+ LI  L    + ++   L
Sbjct: 561 PDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGL 620

Query: 463 YGAALKQGVIP 473
                ++G+ P
Sbjct: 621 LDDMKEKGITP 631



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 179/387 (46%), Gaps = 19/387 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   + +S+K++G    +  +N  L+ LV   +   A     E    G+ PN +
Sbjct: 307 KEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIY 366

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F+ ++   C      +AR ++  M  +G  P+  T++ L++  C +G++ +A  +L +M
Sbjct: 367 SFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEM 426

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R GC PN  T N LL  L   GR+ EA ++L  +       D  T   V+DG CK G+ 
Sbjct: 427 MRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKL 486

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK-RNCLPDKISYST 300
           +EA+E+    +E            L N +         +GL+      + CLPD I+YS 
Sbjct: 487 DEAVEI----VEGMWIHGSAALGNLGNSF---------IGLVDSSSNGKKCLPDLITYSI 533

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++NGL K G++  A   F EMV      D  + ++ +   C     +   +  A++V + 
Sbjct: 534 IINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFC-----KHGKISSAFRVLKD 588

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M K+       TY  +I  LG   +  E    L    E G  P   T+NN+I  LC  G+
Sbjct: 589 MEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGR 648

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
           I  A  LL  M +    P+ +S+ +LI
Sbjct: 649 IKDATSLLDEMLQKGISPNISSFRLLI 675



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 139/274 (50%), Gaps = 13/274 (4%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+  T+SI+I   C      EARK    M     HP+   +   ++S CK G++  A  V
Sbjct: 526 PDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRV 585

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L  M + GC  ++QTYN L+ GL    ++ E Y +L ++K  G+ P++ TY  ++   C+
Sbjct: 586 LKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCE 645

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK---RNCLPD 294
            GR  +A  LL+E +++G++PN+ +F  L   +CK        G++K + +     C   
Sbjct: 646 GGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASD----FGVVKEVFEIALSICGHK 701

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
           +  YS + N LL  G++  A  +F   +   F++     N L+  LC     + ++LE+A
Sbjct: 702 EALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLC-----KDEMLENA 756

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGK-GKKTD 387
             +  KM  K    DP ++  VI  LGK GKK D
Sbjct: 757 SDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHD 790



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 158/330 (47%), Gaps = 19/330 (5%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P V  + +++ S  +  ++     +   M   G  P   T N L+ GLC  GR E+A E+
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G +P+ +++  ++ G+C+ G S  A+ELL+     GV PN V +NTL + +C+
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
           EG   +   L++ M++    PD +++++ ++ L   GKI  A  IF++M     ++DE +
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDM-----QIDEEL 288

Query: 333 ---------MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                     N +L G C     ++ +LE+A  + E M +  ++ +  +Y I +  L + 
Sbjct: 289 GLPRPNITTFNLMLEGFC-----KEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRN 343

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            K  EA + L   ++ G  P   +FN V+  LC  G I  A +++ LM      P   +Y
Sbjct: 344 GKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTY 403

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L+       K   A  +    +++G  P
Sbjct: 404 STLLHGCCSTGKVLKANNILHEMMRRGCSP 433



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 163/369 (44%), Gaps = 52/369 (14%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A     E    G +PN++T +I++     +   FEA K++  M +  Y  +  T  I+++
Sbjct: 419 ANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVID 478

Query: 164 SLCKSGRLKEALEVLDQM--------GRIG---------------CKPNIQTYNCLLKGL 200
            LCKSG+L EA+E+++ M        G +G               C P++ TY+ ++ GL
Sbjct: 479 GLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGL 538

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C  GR++EA +  + +    L PD   Y   +  FCK G+ + A  +L +  +RG   ++
Sbjct: 539 CKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSL 598

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            T+N+L  G   +    +  GLL  MK++   P+  +Y+ +++ L + G+I+ A S+  E
Sbjct: 599 QTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDE 658

Query: 321 MVRFGFEVDERMMNSLLRGLCMKS--WEEKDLLE-------------------------- 352
           M++ G   +      L++  C  S     K++ E                          
Sbjct: 659 MLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEV 718

Query: 353 -DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
            +A ++F+    +        Y  +I  L K +  + A   LH  I+ G+     +F  V
Sbjct: 719 SEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPV 778

Query: 412 IQALCGEGK 420
           I  L   GK
Sbjct: 779 IDGLGKRGK 787


>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 198/413 (47%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   ++E +  F  + + G   +V   N LL  L+ LN  +   + + E   +G+APN 
Sbjct: 244 LRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNL 303

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +TF+I+    C   D  +  K ++ M + G+ P++ T+  L+NS C+ GRL +A  +   
Sbjct: 304 YTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKI 363

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G  P++ +Y  L+ GLC  GRV EA+++   + + GL PD+ TY  ++ G+CK G+
Sbjct: 364 MYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGK 423

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             E+  LL++ I  G++P+  T   L  GY KEG  +  + L+  +++      +  YS 
Sbjct: 424 MQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSY 483

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+  L +  +   A ++ + M + G + +  + N L++  C     + D + +A  +  +
Sbjct: 484 LIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFC-----QCDCIAEALLLKME 538

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  K    +  TY  VJ  L +  ++ E    +   +  G +P       +    C E  
Sbjct: 539 MVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCREND 598

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           IDKA  LL    +  +I    S++ LI           +  +    LK G++P
Sbjct: 599 IDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLP 651



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 157/355 (44%), Gaps = 28/355 (7%)

Query: 125 IMIRCYCNKNDFFEARKVIDCM-FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           +++RC   ++D F A    + +  D G  P+   + I+V++L  S    +A++ L ++  
Sbjct: 151 VLLRC---QSDSFTALSFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVE 207

Query: 184 I-------------------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           +                    C  +   ++ L+K    +GRV E       +   G  P 
Sbjct: 208 LVKDDLPGEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPT 267

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V T   +++G  K+  ++   E+  E    G+ PN+ TFN L +  CK+G   K    L+
Sbjct: 268 VITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLE 327

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            M++    PD ++Y+TL+N   + G++  A  ++K M R G   D     +L+ GLC   
Sbjct: 328 KMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLC--- 384

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
             ++  + +A+Q+F +M  +    D  TY  +I    K  K  E+   LH  I  G  P 
Sbjct: 385 --KEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPD 442

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           + T   +++    EGK   AL L+  +       S+  Y  LI  L +  + + A
Sbjct: 443 SFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAA 497



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 99/212 (46%)

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
           +A+    E   +G++ +   +S +I   C +N  F A+ +++ M  +G+   +  +  L+
Sbjct: 461 SALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELI 520

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
            S C+   + EAL +  +M     KPN+ TY  +J  L  + R  E   ++  +   G  
Sbjct: 521 KSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXL 580

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           PD+    A+  G+C+    ++A  LL+   +     +  +FN L      +G   + + +
Sbjct: 581 PDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEI 640

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
             +M K   LP+ ++   +++GL K  ++  A
Sbjct: 641 QDMMLKMGLLPNPLTCKYVIDGLWKARRVDSA 672


>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 198/413 (47%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   ++E +  F  + + G   +V   N LL  L+ LN  +   + + E   +G+APN 
Sbjct: 199 LRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNL 258

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +TF+I+    C   D  +  K ++ M + G+ P++ T+  L+NS C+ GRL +A  +   
Sbjct: 259 YTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKI 318

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G  P++ +Y  L+ GLC  GRV EA+++   + + GL PD+ TY  ++ G+CK G+
Sbjct: 319 MYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGK 378

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             E+  LL++ I  G++P+  T   L  GY KEG  +  + L+  +++      +  YS 
Sbjct: 379 MQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSY 438

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+  L +  +   A ++ + M + G + +  + N L++  C     + D + +A  +  +
Sbjct: 439 LIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFC-----QCDCIAEALLLKME 493

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  K    +  TY  VI  L +  ++ E    +   +  G +P       +    C E  
Sbjct: 494 MVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCREND 553

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           IDKA  LL    +  +I    S++ LI           +  +    LK G++P
Sbjct: 554 IDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLP 606



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 162/370 (43%), Gaps = 28/370 (7%)

Query: 125 IMIRCYCNKNDFFEARKVIDCM-FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           +++RC   ++D F A    + +  D G  P+   + I+V++L  S    +A++ L ++  
Sbjct: 106 VLLRC---QSDSFTALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVE 162

Query: 184 I-------------------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           +                    C  +   ++ L+K    +GRV E       +   G  P 
Sbjct: 163 LVKDDLPSEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPT 222

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V T   +++G  K+  ++   E+  E    G+ PN+ TFN L +  CK+G   K    L+
Sbjct: 223 VITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLE 282

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            M++    PD ++Y+TL+N   + G++  A  ++K M R G   D     +L+ GLC   
Sbjct: 283 KMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLC--- 339

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
             ++  + +A+Q+F +M  +    D  TY  +I    K  K  E+   LH  I  G  P 
Sbjct: 340 --KEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPD 397

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
           + T   +++    EGK   AL L+  +       S+  Y  LI  L +  + + A  L  
Sbjct: 398 SFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLE 457

Query: 465 AALKQGVIPQ 474
              K G  P+
Sbjct: 458 RMSKDGHKPE 467



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 92/195 (47%)

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
           +A+    E   +G++ +   +S +I   C +N  F A+ +++ M  +G+ P +  +  L+
Sbjct: 416 SALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELI 475

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
            S C+   + EAL +  +M     KPN+ TY  ++  L  + R  E   ++  +   G+ 
Sbjct: 476 KSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGML 535

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           PD+    A+  G+C+    ++A  LL+   +     +  +FN L      +G   + + +
Sbjct: 536 PDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEI 595

Query: 283 LKLMKKRNCLPDKIS 297
             +M K   LP+ ++
Sbjct: 596 QDMMLKMGLLPNPLT 610


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 223/479 (46%), Gaps = 68/479 (14%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K+   +E ++++  +  DG   SV  ++ L++A     + ET +    E  ++G+ PN 
Sbjct: 296 VKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNV 355

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           ++++I IR       F EA +++  M + G  P+V T T+L+  LC +GR+ +A +V  +
Sbjct: 356 YSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWK 415

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M +   KP+  TY  LL      G  +   E+   +K DG   +V  YTAV+D  C+VGR
Sbjct: 416 MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 475

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNG------------------------------- 269
             EA+E+ +E  ++G+ P   ++N+L +G                               
Sbjct: 476 VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVL 535

Query: 270 ----YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
               Y K G  +K +   +LMK +  +PD ++ + +L GL K G++  A  +F E+   G
Sbjct: 536 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 595

Query: 326 FEVDERMMNSLLRGLCMKS--WEEK-----DLLE------------------------DA 354
              D      +++  C K+  ++E      D++E                        +A
Sbjct: 596 VSPDTITYTMMIK-CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 654

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           +++F ++ +       GTY  ++  LG+  K  E +  L       + P  IT+N ++  
Sbjct: 655 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 714

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LC  G ++ AL +L+ M     IP  +SY+ +I  L + E+  +A +++   +K+ +IP
Sbjct: 715 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF-CQMKKVLIP 772



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 181/388 (46%), Gaps = 5/388 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +K+ G   +   +N L+  LV       A++ +      G+ P+  T+S+++  +  + D
Sbjct: 276 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 335

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
                 ++  M  +G  PNV ++TI +  L ++ R  EA  +L +M   GCKP++ T+  
Sbjct: 336 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTV 395

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L++ LC  GR+ +A ++   +K    KPD  TY  ++D F   G S   ME+ N     G
Sbjct: 396 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 455

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
              NVV +  + +  C+ G   + + +   MK++  +P++ SY++L++G LK  +   A+
Sbjct: 456 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 515

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +FK M     ++     N     L +  + +      A Q +E M  K  V D      
Sbjct: 516 ELFKHM-----DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA 570

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           V+  L K  +   A    H    MG  P TIT+  +I+      K D+A+ + + M E+ 
Sbjct: 571 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 630

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALY 463
            +P   + + LI  L +  +  +A  ++
Sbjct: 631 CVPDVLAVNSLIDTLYKAGRGDEAWRIF 658



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 189/393 (48%), Gaps = 10/393 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++I++++K DG N +V  +  ++ AL  +     A++ F E    G+ P  ++++ +I  
Sbjct: 445 MEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG 504

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +   + F +A ++   M  +G  PN  T  + +N   KSG   +A++  + M   G  P+
Sbjct: 505 FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 564

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           +   N +L GL   GR+  A  +   +K  G+ PD  TYT ++    K  + +EA+++  
Sbjct: 565 VVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFY 624

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           + IE    P+V+  N+L +   K G   +   +   +K+ N  P   +Y+TLL GL + G
Sbjct: 625 DMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREG 684

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K++  + + +EM    +  +    N++L  LC     +   + DA  +   MT K  + D
Sbjct: 685 KVKEVMHLLEEMYHSNYPPNLITYNTILDCLC-----KNGAVNDALDMLYSMTTKGCIPD 739

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL- 428
             +Y  VI  L K ++ +EA   +   ++   IP   T   ++ +    G + +AL ++ 
Sbjct: 740 LSSYNTVIYGLVKEERYNEAF-SIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIK 798

Query: 429 -FLMYEHAKIPSRTSYDML--ITKLDQLEKSYD 458
            + +   +K    + + ++  I K   +EKS +
Sbjct: 799 DYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIE 831



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 187/410 (45%), Gaps = 7/410 (1%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            KAS   E + IF  + ++     V   N L+  L      + A + F +     L P   
Sbjct: 612  KASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDG 671

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T++ ++     +    E   +++ M+ + Y PN+ T+  +++ LCK+G + +AL++L  M
Sbjct: 672  TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 731

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               GC P++ +YN ++ GL    R  EA+ +   +K   L PD  T   ++  F K+G  
Sbjct: 732  TTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLM 790

Query: 242  NEAMELLNEA-IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA+ ++ +  ++ G   +  + ++L  G  K+    K +   +++       D      
Sbjct: 791  KEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCP 850

Query: 301  LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
            L+  L K  K   A  + K+   FG  +   + NSL+ GL      +++L++ A  +F +
Sbjct: 851  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLV-----DENLIDIAEGLFAE 905

Query: 361  MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            M +     D  TY +++  +GK  + +E L         G+    +T+N +I  L    +
Sbjct: 906  MKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR 965

Query: 421  IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
            +++A+ L + +      P+  +Y  L+  L +  +  DA  L+   L+ G
Sbjct: 966  LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 1015



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 149/313 (47%), Gaps = 5/313 (1%)

Query: 161  LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
            L+  LCK  +  EA E++ +    G       YN L+ GL     ++ A  +   +K  G
Sbjct: 851  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 910

Query: 221  LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
              PD +TY  ++D   K  R  E +++  E   +G     VT+NT+ +G  K     + +
Sbjct: 911  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 970

Query: 281  GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
             L   +  +   P   +Y  LL+GLLK G+I  A ++F EM+ +G + +  + N LL G 
Sbjct: 971  DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 1030

Query: 341  CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
             +    EK        +F+ M  +    D  +Y I+I TL K  + ++ L +    +EMG
Sbjct: 1031 RIAGNTEK-----VCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMG 1085

Query: 401  HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
              P  IT+N +I  L    ++++A+ L   M +   +P+  +Y+ LI  L +  K+ +A 
Sbjct: 1086 LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAG 1145

Query: 461  ALYGAALKQGVIP 473
             +Y   L +G  P
Sbjct: 1146 KMYEELLTKGWKP 1158



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 150/329 (45%), Gaps = 40/329 (12%)

Query: 68   ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
            E  ++    K  G +     +N L+  LV  N  + A   F+E    G  P+ +T+++++
Sbjct: 863  EAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 922

Query: 128  RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV---------- 177
                      E  KV + M   GY     T+  +++ L KS RL++A+++          
Sbjct: 923  DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 982

Query: 178  ------------LDQMGRI-------------GCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
                        L + GRI             GCK N   YN LL G    G  E+   +
Sbjct: 983  PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHL 1042

Query: 213  LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              ++ + G+ PD+ +YT ++D  CK G+ N+ +    + +E G+ P+++T+N L +G  K
Sbjct: 1043 FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGK 1102

Query: 273  EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                 + V L   M+K+  +P+  +Y++L+  L K GK   A  +++E++  G++ +   
Sbjct: 1103 SKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFT 1162

Query: 333  MNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
             N+L+RG  +         + AY  + +M
Sbjct: 1163 YNALIRGYSVSG-----STDSAYAAYGRM 1186



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 167/400 (41%), Gaps = 41/400 (10%)

Query: 61   IKASPLKERIDIF-DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
            +K   +KE + I  D   + G+    S  + L+  ++     E +++F    +S G+  +
Sbjct: 785  VKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLD 844

Query: 120  SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             +    +I+  C +    EA +++      G       +  L+  L     +  A  +  
Sbjct: 845  DFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFA 904

Query: 180  QMGRIGCKPN----------------------IQ-------------TYNCLLKGLCYVG 204
            +M  +GC P+                      +Q             TYN ++ GL    
Sbjct: 905  EMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSR 964

Query: 205  RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            R+E+A ++  N+ + G  P   TY  ++DG  K GR  +A  L NE +E G   N   +N
Sbjct: 965  RLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYN 1024

Query: 265  TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
             L NG+   G   K   L + M  +   PD  SY+ +++ L K G++   ++ F++++  
Sbjct: 1025 ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM 1084

Query: 325  GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
            G E D    N L+ GL      +   LE+A  +F +M KK  V +  TY  +I  LGK  
Sbjct: 1085 GLEPDLITYNLLIDGL-----GKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAG 1139

Query: 385  KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            K  EA       +  G  P   T+N +I+     G  D A
Sbjct: 1140 KAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSA 1179



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E +++FD +K+ G       +N L+   +  +    A++ F     +G  PN +T  + I
Sbjct: 478 EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFI 537

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             Y    +  +A +  + M   G  P+V     ++  L KSGRL  A  V  ++  +G  
Sbjct: 538 NYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 597

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TY  ++K      + +EA ++  ++  +   PDV    +++D   K GR +EA  +
Sbjct: 598 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRI 657

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             +  E  + P   T+NTL  G  +EG   + + LL+ M   N  P+ I+Y+T+L+ L K
Sbjct: 658 FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 717

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G +  A+ +   M   G   D    N+++ GL      +++   +A+ +F +M KKV +
Sbjct: 718 NGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV-----KEERYNEAFSIFCQM-KKVLI 771

Query: 368 TDPGTYGIVIRTLGK------------------GKKTDEALIH--LHHAIEMGHIPRTIT 407
            D  T   ++ +  K                  G KTD +  H  +   ++   I ++I 
Sbjct: 772 PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIE 831

Query: 408 FNNVIQA 414
           F  +I +
Sbjct: 832 FAEIIAS 838



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 128/287 (44%), Gaps = 1/287 (0%)

Query: 40   AESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVML 98
            AE  +L   P        +D + K+  ++E + + + + + G   +   +N ++  LV  
Sbjct: 904  AEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKS 963

Query: 99   NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
               E A+  +    S G +P   T+  ++          +A  + + M + G   N T +
Sbjct: 964  RRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIY 1023

Query: 159  TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
             IL+N    +G  ++   +   M   G  P+I++Y  ++  LC  G++ +       +  
Sbjct: 1024 NILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLE 1083

Query: 219  DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
             GL+PD+ TY  ++DG  K  R  EA+ L NE  ++G+ PN+ T+N+L     K G   +
Sbjct: 1084 MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1143

Query: 279  GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
               + + +  +   P+  +Y+ L+ G    G    A + +  M+  G
Sbjct: 1144 AGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGG 1190



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 99/199 (49%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            +KA  +++  ++F+ + + G   + + +N LL    +    E     F +    G+ P+ 
Sbjct: 996  LKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDI 1055

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             +++I+I   C      +       + + G  P++ T+ +L++ L KS RL+EA+ + ++
Sbjct: 1056 KSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 1115

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            M + G  PN+ TYN L+  L   G+  EA +M   +   G KP+V+TY A++ G+   G 
Sbjct: 1116 MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1175

Query: 241  SNEAMELLNEAIERGVTPN 259
            ++ A       I  G  PN
Sbjct: 1176 TDSAYAAYGRMIVGGCLPN 1194



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 11/316 (3%)

Query: 153 PNVTTFTILVNSLCK----SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           P V   T   N + +     GR+ +  EV D M R   K N+ T+  +  GL   G +  
Sbjct: 209 PRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRS 268

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A   L  +K  G+  + YTY  ++    K G   EA+E+    +  GV P+V T++ L  
Sbjct: 269 APVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMV 328

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
            + K       + LL+ M+     P+  SY+  +  L +  +   A  I  +M   G + 
Sbjct: 329 AFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKP 388

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D      L++ LC     +   + DA  VF KM K     D  TY  ++   G    + +
Sbjct: 389 DVITHTVLIQVLC-----DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS-Q 442

Query: 389 ALIHLHHAIEM-GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +++ + +A++  G+    + +  VI ALC  G++ +AL +   M +   +P + SY+ LI
Sbjct: 443 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 502

Query: 448 TKLDQLEKSYDACALY 463
           +   + ++  DA  L+
Sbjct: 503 SGFLKADRFGDALELF 518



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 145/372 (38%), Gaps = 5/372 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E   +F S A    +A  + + + M+          +  +V D M       NV TF  +
Sbjct: 197 EALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAI 256

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
              L   G L+ A   L  M   G   N  TYN L+  L   G   EA E+   +  DG+
Sbjct: 257 FGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGV 316

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P V TY+ +M  F K       + LL E    GV PNV ++        +     +   
Sbjct: 317 VPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYR 376

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +L  M+   C PD I+++ L+  L   G+I  A  +F +M +   + D     +LL    
Sbjct: 377 ILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLL---- 432

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
              + +    +   +++  M       +   Y  VI  L +  +  EAL       + G 
Sbjct: 433 -DKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 491

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           +P   ++N++I       +   AL L   M  H   P+  ++ + I    +  +S  A  
Sbjct: 492 VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 551

Query: 462 LYGAALKQGVIP 473
            Y     +G++P
Sbjct: 552 RYELMKSKGIVP 563


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 203/411 (49%), Gaps = 44/411 (10%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G  ++V + N LL  L    E   AV    E     L P+ ++++ +IR +C   +  
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK---------- 187
           +A ++ + M  +G   ++ T+ IL+++ CK+G++ EA+  L +M  +G +          
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254

Query: 188 -------------------------PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
                                    P   TYN L++G C +G+++EA E+   +   G++
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P+VYTYT ++DG C VG++ EA++LLN  IE+   PN VT+N + N  CK+G     V +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM--NSLLRGL 340
           ++LMKKR   PD I+Y+ LL GL   G +  A  +   M++     D  ++  N+L+ GL
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     +++ L  A  +++ + +K+   D  T  I++ +  K    ++A+  L   I   
Sbjct: 435 C-----KENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM-ELWKQISDS 488

Query: 401 HIPR-TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            I R + T+  +I   C  G ++ A  LL  M      PS   Y+ L++ L
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 189/400 (47%), Gaps = 8/400 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK  + +F      G++ + +  N+L+  LV     E A  F+ +        N  + S 
Sbjct: 54  LKNAVSVFQQAVDSGSSLAFAG-NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSG 112

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++ CY        A  V+  M   G+  NV    IL+  LC++    +A+ +L +M R  
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ +YN +++G C    +E+A E+   +K  G    + T+  ++D FCK G+ +EAM
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
             L E    G+  ++V + +L  G+C  G   +G  L   + +R   P  I+Y+TL+ G 
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+++ A  IF+ M+  G   +      L+ GLC          ++A Q+   M +K 
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT-----KEALQLLNLMIEKD 347

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY I+I  L K     +A+  +    +    P  IT+N ++  LC +G +D+A 
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407

Query: 426 LLLFLMYEHAKI--PSRTSYDMLITKLDQLEKSYDACALY 463
            LL+LM + +    P   SY+ LI  L +  + + A  +Y
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 189/416 (45%), Gaps = 11/416 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E +     +K  G    +  +  L+       E +     F E    G +P + 
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +IR +C      EA ++ + M + G  PNV T+T L++ LC  G+ KEAL++L+ M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                +PN  TYN ++  LC  G V +A E++  +K    +PD  TY  ++ G C  G  
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 242 NEAMELLNEAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           +EA +LL   ++      P+V+++N L +G CKE    + + +  L+ ++    D+++ +
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            LLN  LK G +  A+ ++K++       +     +++ G C     +  +L  A  +  
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC-----KTGMLNVAKGLLC 518

Query: 360 KMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           KM  +VS   P    Y  ++ +L K    D+A           + P  ++FN +I     
Sbjct: 519 KM--RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            G I  A  LL  M      P   +Y  LI +  +L    +A + +   +  G  P
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 171/389 (43%), Gaps = 42/389 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + + G +     +N L+     L + + A + F      G+ PN +T++ +I   C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA ++++ M +    PN  T+ I++N LCK G + +A+E+++ M +   +P+  
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDGFCK------------ 237
           TYN LL GLC  G ++EA ++L  +  D     PDV +Y A++ G CK            
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448

Query: 238 -----------------------VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
                                   G  N+AMEL  +  +  +  N  T+  + +G+CK G
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
                 GLL  M+     P    Y+ LL+ L K G +  A  +F+EM R     D    N
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            ++ G    S +  D+ + A  +   M++     D  TY  +I    K    DEA+    
Sbjct: 569 IMIDG----SLKAGDI-KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDK 423
             ++ G  P     ++V++    +G+ DK
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDK 652



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 6/318 (1%)

Query: 47  ENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM---LNEQE 102
           E P ++     ++++ K   + + ++I + +KK  T      +N LL  L     L+E  
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
             +    + SSY   P+  +++ +I   C +N   +A  + D + +     +  T  IL+
Sbjct: 408 KLLYLMLKDSSY-TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
           NS  K+G + +A+E+  Q+       N  TY  ++ G C  G +  A  +L  ++   L+
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P V+ Y  ++   CK G  ++A  L  E       P+VV+FN + +G  K G       L
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L  M +    PD  +YS L+N  LK G +  A+S F +MV  GFE D  + +S+L+  C+
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK-YCI 645

Query: 343 KSWEEKDLLEDAYQVFEK 360
              E   L E   ++ +K
Sbjct: 646 SQGETDKLTELVKKLVDK 663



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 126/243 (51%), Gaps = 2/243 (0%)

Query: 62  KASPLKERIDIFDS-IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K + L + +DI+D  ++K G    V+  N LL + +   +   A++ + + S   +  NS
Sbjct: 436 KENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ MI  +C       A+ ++  M  +   P+V  +  L++SLCK G L +A  + ++
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R    P++ ++N ++ G    G ++ A  +L+ +   GL PD++TY+ +++ F K+G 
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+   ++ ++ G  P+    +++      +G   K   L+K +  ++ + DK    T
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCT 674

Query: 301 LLN 303
           +++
Sbjct: 675 VMD 677



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 6/235 (2%)

Query: 240 RSNE-AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           R++E A     + +E     N V+ + L   Y +        G+L LM KR    +  ++
Sbjct: 86  RNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNH 145

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + LL GL +  +   AVS+ +EM R     D    N+++RG C     E   LE A ++ 
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC-----EGKELEKALELA 200

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            +M          T+GI+I    K  K DEA+  L     MG     + + ++I+  C  
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G++D+   L   + E    P   +Y+ LI    +L +  +A  ++   +++GV P
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 79/162 (48%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           L P+ + ++ ++   C +    +A ++ + M  +   P+V +F I+++   K+G +K A 
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            +L  M R G  P++ TY+ L+     +G ++EA      + + G +PD +   +V+   
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
              G +++  EL+ + +++ +  +     T+ +  C     M
Sbjct: 645 ISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANM 686


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 197/414 (47%), Gaps = 5/414 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++ +D+   +++ G   +   +N L+  L    E E A     E    GL  +++
Sbjct: 246 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 305

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  Y NK    EA  + + M   G  P V T+   +  LCK GR+ +A++ L  M
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 365

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P++ +YN L+ G C +G + +A+ +   +++  L P + TY  ++DG C+ G  
Sbjct: 366 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL 425

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A +L  E I  G+ P++VT+  L NG CK G+          M       D  +Y+T 
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G LK G    A S+ +EM+  GF  D  + N ++ GLC     +   LE+A ++ +KM
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC-----KLGNLEEASELLQKM 540

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                + D  TY  +I    +  +  +     +  +  G  P  +T+  +I    G+G++
Sbjct: 541 VSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRL 600

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           ++A +    M E   +P+  +Y+ LI  L ++ +   A   +   +++G+ P +
Sbjct: 601 ERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNK 654



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 184/388 (47%), Gaps = 9/388 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S +++ + +FD + K   +  V + N +L  L   +    AV+ +     +G+ P   
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  YC      +   ++  M   G  PN  T+ +L+N L K G  ++A  ++ +M
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G K +  TYN L+ G    G + EA  +   +   G  P V TY + + G CK+GR 
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++AM+ L++ +   + P+VV++NTL  GYC+ G  MK   L   ++     P  ++Y+TL
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+GL + G++  A  +  EM+  G   D      L+ G C     +   L  A + F++M
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSC-----KMGSLSMAQEFFDEM 470

Query: 362 TKKVSVTDPGTYGIVIRTLGKGK--KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
             +    D  +Y    R +G+ K   T  A       +  G  P  I +N V+  LC  G
Sbjct: 471 LHEGLELD--SYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            +++A  LL  M     IP   +Y  +I
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSII 556



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 183/387 (47%), Gaps = 5/387 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E + + + +   G + +V+ +N  +  L  L     A++  S+  +  L P+  +++ 
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 379

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC   +  +A  + D +      P + T+  L++ LC+ G L+ A ++  +M   G
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+I TY  L+ G C +G +  A E    + ++GL+ D Y Y   + G  K+G ++ A 
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 499

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  E + +G  P+++ +N + +G CK G   +   LL+ M     +PD ++Y+++++  
Sbjct: 500 SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAH 559

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
           L+ G++R    IF EM+  G          L+ G        K  LE A+  F +M +K 
Sbjct: 560 LENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG-----HAGKGRLERAFIYFSEMQEKG 614

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            + +  TY  +I  L K ++ D+A       +E G  P   ++  +I   C  G   +AL
Sbjct: 615 ILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEAL 674

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            L   M +    P   ++  L+ +L +
Sbjct: 675 SLYKQMLDRGVQPDSCTHSALLKQLGK 701



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 121/242 (50%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           + FD +  +G       +   ++  + L +   A     E  + G  P+   +++++   
Sbjct: 465 EFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGL 524

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +  EA +++  M  +G  P+  T+T ++++  ++GRL++  E+  +M   G  P++
Sbjct: 525 CKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSV 584

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  L+ G    GR+E A+     ++  G+ P+V TY ++++G CKV R ++A     E
Sbjct: 585 VTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAE 644

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +E+G+ PN  ++  L N  C  G   + + L K M  R   PD  ++S LL  L K  K
Sbjct: 645 MVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCK 704

Query: 311 IR 312
           ++
Sbjct: 705 LQ 706



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 5/294 (1%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           +V    +L+    K   +++ L V D+M +    P+++  N +L+ L     + +A E+ 
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +   G+KP + TY  ++D +CK G+  + ++LL+E   RG  PN VT+N L NG  K+
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +  GL+  M K        +Y+ L+ G    G +  A+S+ +EMV  G        
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           NS + GLC     +   + DA Q    M     + D  +Y  +I    +     +A +  
Sbjct: 343 NSFIYGLC-----KLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                +   P  +T+N ++  LC +G+++ A  L   M      P   +Y +L+
Sbjct: 398 DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILV 451



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 105/220 (47%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           A R V  +K         + + +   G    +  +N ++  L  L   E A +   +  S
Sbjct: 483 ATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVS 542

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
            G+ P+  T++ +I  +       + R++   M   G  P+V T+T+L++     GRL+ 
Sbjct: 543 DGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLER 602

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A     +M   G  PN+ TYN L+ GLC V R+++AY     +   G+ P+ Y+YT +++
Sbjct: 603 AFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             C +G   EA+ L  + ++RGV P+  T + L     K+
Sbjct: 663 ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 20/171 (11%)

Query: 321 MVRFGFEVDERMMNS-------LLRGLCMKS-------------WEEKDLLEDAYQVFEK 360
           ++R  + V ER++N+       +L G C+ S             + +K ++E    VF+K
Sbjct: 130 LMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDK 189

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M K     D      ++R L       +A+       E G  P  +T+N ++ + C  GK
Sbjct: 190 MIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGK 249

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           + + L LL  M      P+  +Y++LI  L +  +   A  L G  LK G+
Sbjct: 250 VQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGL 300


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 197/414 (47%), Gaps = 5/414 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++ +D+   +++ G   +   +N L+  L    E E A     E    GL  +++
Sbjct: 246 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 305

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  Y NK    EA  + + M   G  P V T+   +  LCK GR+ +A++ L  M
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 365

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P++ +YN L+ G C +G + +A+ +   +++  L P + TY  ++DG C+ G  
Sbjct: 366 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL 425

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A +L  E I  G+ P++VT+  L NG CK G+          M       D  +Y+T 
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G LK G    A S+ +EM+  GF  D  + N ++ GLC     +   LE+A ++ +KM
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC-----KLGNLEEASELLQKM 540

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                + D  TY  +I    +  +  +     +  +  G  P  +T+  +I    G+G++
Sbjct: 541 VSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRL 600

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           ++A +    M E   +P+  +Y+ LI  L ++ +   A   +   +++G+ P +
Sbjct: 601 ERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNK 654



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 184/388 (47%), Gaps = 9/388 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K S +++ + +FD + K   +  V + N +L  L   +    AV+ +     +G+ P   
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  YC      +   ++  M   G  PN  T+ +L+N L K G  ++A  ++ +M
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G K +  TYN L+ G    G + EA  +   +   G  P V TY + + G CK+GR 
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++AM+ L++ +   + P+VV++NTL  GYC+ G  MK   L   ++     P  ++Y+TL
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+GL + G++  A  +  EM+  G   D      L+ G C     +   L  A + F++M
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSC-----KMGSLSMAQEFFDEM 470

Query: 362 TKKVSVTDPGTYGIVIRTLGKGK--KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
             +    D  +Y    R +G+ K   T  A       +  G  P  I +N V+  LC  G
Sbjct: 471 LHEGLELD--SYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            +++A  LL  M     IP   +Y  +I
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSII 556



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 188/401 (46%), Gaps = 8/401 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E + + + +   G + +V+ +N  +  L  L     A++  S+  +  L P+  +++ 
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 379

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC   +  +A  + D +      P + T+  L++ LC+ G L+ A ++  +M   G
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+I TY  L+ G C +G +  A E    + ++GL+ D Y Y   + G  K+G ++ A 
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 499

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  E + +G  P+++ +N + +G CK G   +   LL+ M     +PD ++Y+++++  
Sbjct: 500 SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAH 559

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
           L+ G++R    IF EM+  G          L+ G        K  LE A+  F +M +K 
Sbjct: 560 LENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHA-----GKGRLERAFIYFSEMQEKG 614

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            + +  TY  +I  L K ++ D+A       +E G  P   ++  +I   C  G   +AL
Sbjct: 615 ILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEAL 674

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
            L   M +    P   ++  L   L QL K     A++G +
Sbjct: 675 SLYKQMLDRGVQPDSCTHSAL---LKQLGKDCKLQAVHGTS 712



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 5/294 (1%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           +V    +L+    K   +++ L V D+M +    P+++  N +L+ L     + +A E+ 
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +   G+KP + TY  ++D +CK G+  + ++LL+E   RG  PN VT+N L NG  K+
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +  GL+  M K        +Y+ L+ G    G +  A+S+ +EMV  G        
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           NS + GLC     +   + DA Q    M     + D  +Y  +I    +     +A +  
Sbjct: 343 NSFIYGLC-----KLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                +   P  +T+N ++  LC +G+++ A  L   M      P   +Y +L+
Sbjct: 398 DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILV 451



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 105/220 (47%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           A R V  +K         + + +   G    +  +N ++  L  L   E A +   +  S
Sbjct: 483 ATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVS 542

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
            G+ P+  T++ +I  +       + R++   M   G  P+V T+T+L++     GRL+ 
Sbjct: 543 DGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLER 602

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A     +M   G  PN+ TYN L+ GLC V R+++AY     +   G+ P+ Y+YT +++
Sbjct: 603 AFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             C +G   EA+ L  + ++RGV P+  T + L     K+
Sbjct: 663 ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 20/171 (11%)

Query: 321 MVRFGFEVDERMMNS-------LLRGLCMKS-------------WEEKDLLEDAYQVFEK 360
           ++R  + V ER++N+       +L G C+ S             + +K ++E    VF+K
Sbjct: 130 LMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDK 189

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M K     D      ++R L       +A+       E G  P  +T+N ++ + C  GK
Sbjct: 190 MIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGK 249

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           + + L LL  M      P+  +Y++LI  L +  +   A  L G  LK G+
Sbjct: 250 VQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGL 300


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 223/479 (46%), Gaps = 68/479 (14%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K+   +E ++++  +  DG   SV  ++ L++A     + ET +    E  ++G+ PN 
Sbjct: 206 VKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNV 265

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           ++++I IR       F EA +++  M + G  P+V T T+L+  LC +GR+ +A +V  +
Sbjct: 266 YSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWK 325

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M +   KP+  TY  LL      G  +   E+   +K DG   +V  YTAV+D  C+VGR
Sbjct: 326 MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 385

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNG------------------------------- 269
             EA+E+ +E  ++G+ P   ++N+L +G                               
Sbjct: 386 VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVL 445

Query: 270 ----YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
               Y K G  +K +   +LMK +  +PD ++ + +L GL K G++  A  +F E+   G
Sbjct: 446 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 505

Query: 326 FEVDERMMNSLLRGLCMKS--WEEK-----DLLE------------------------DA 354
              D      +++  C K+  ++E      D++E                        +A
Sbjct: 506 VSPDTITYTMMIK-CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 564

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           +++F ++ +       GTY  ++  LG+  K  E +  L       + P  IT+N ++  
Sbjct: 565 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 624

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LC  G ++ AL +L+ M     IP  +SY+ +I  L + E+  +A +++   +K+ +IP
Sbjct: 625 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF-CQMKKVLIP 682



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 181/388 (46%), Gaps = 5/388 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +K+ G   +   +N L+  LV       A++ +      G+ P+  T+S+++  +  + D
Sbjct: 186 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 245

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
                 ++  M  +G  PNV ++TI +  L ++ R  EA  +L +M   GCKP++ T+  
Sbjct: 246 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTV 305

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L++ LC  GR+ +A ++   +K    KPD  TY  ++D F   G S   ME+ N     G
Sbjct: 306 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 365

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
              NVV +  + +  C+ G   + + +   MK++  +P++ SY++L++G LK  +   A+
Sbjct: 366 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 425

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +FK M     ++     N     L +  + +      A Q +E M  K  V D      
Sbjct: 426 ELFKHM-----DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA 480

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           V+  L K  +   A    H    MG  P TIT+  +I+      K D+A+ + + M E+ 
Sbjct: 481 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 540

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALY 463
            +P   + + LI  L +  +  +A  ++
Sbjct: 541 CVPDVLAVNSLIDTLYKAGRGDEAWRIF 568



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 189/393 (48%), Gaps = 10/393 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++I++++K DG N +V  +  ++ AL  +     A++ F E    G+ P  ++++ +I  
Sbjct: 355 MEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG 414

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +   + F +A ++   M  +G  PN  T  + +N   KSG   +A++  + M   G  P+
Sbjct: 415 FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 474

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           +   N +L GL   GR+  A  +   +K  G+ PD  TYT ++    K  + +EA+++  
Sbjct: 475 VVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFY 534

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           + IE    P+V+  N+L +   K G   +   +   +K+ N  P   +Y+TLL GL + G
Sbjct: 535 DMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREG 594

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K++  + + +EM    +  +    N++L  LC     +   + DA  +   MT K  + D
Sbjct: 595 KVKEVMHLLEEMYHSNYPPNLITYNTILDCLC-----KNGAVNDALDMLYSMTTKGCIPD 649

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL- 428
             +Y  VI  L K ++ +EA   +   ++   IP   T   ++ +    G + +AL ++ 
Sbjct: 650 LSSYNTVIYGLVKEERYNEAF-SIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIK 708

Query: 429 -FLMYEHAKIPSRTSYDML--ITKLDQLEKSYD 458
            + +   +K    + + ++  I K   +EKS +
Sbjct: 709 DYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIE 741



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 187/410 (45%), Gaps = 7/410 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KAS   E + IF  + ++     V   N L+  L      + A + F +     L P   
Sbjct: 522 KASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDG 581

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++     +    E   +++ M+ + Y PN+ T+  +++ LCK+G + +AL++L  M
Sbjct: 582 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 641

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P++ +YN ++ GL    R  EA+ +   +K   L PD  T   ++  F K+G  
Sbjct: 642 TTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLM 700

Query: 242 NEAMELLNEA-IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            EA+ ++ +  ++ G   +  + ++L  G  K+    K +   +++       D      
Sbjct: 701 KEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCP 760

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+  L K  K   A  + K+   FG  +   + NSL+ GL      +++L++ A  +F +
Sbjct: 761 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLV-----DENLIDIAEGLFAE 815

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +     D  TY +++  +GK  + +E L         G+    +T+N +I  L    +
Sbjct: 816 MKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR 875

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +++A+ L + +      P+  +Y  L+  L +  +  DA  L+   L+ G
Sbjct: 876 LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 925



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E +++FD +K+ G       +N L+   +  +    A++ F     +G  PN +T  + I
Sbjct: 388 EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFI 447

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             Y    +  +A +  + M   G  P+V     ++  L KSGRL  A  V  ++  +G  
Sbjct: 448 NYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 507

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TY  ++K      + +EA ++  ++  +   PDV    +++D   K GR +EA  +
Sbjct: 508 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRI 567

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             +  E  + P   T+NTL  G  +EG   + + LL+ M   N  P+ I+Y+T+L+ L K
Sbjct: 568 FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 627

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G +  A+ +   M   G   D    N+++ GL      +++   +A+ +F +M KKV +
Sbjct: 628 NGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV-----KEERYNEAFSIFCQM-KKVLI 681

Query: 368 TDPGTYGIVIRTLGK------------------GKKTDEALIH--LHHAIEMGHIPRTIT 407
            D  T   ++ +  K                  G KTD +  H  +   ++   I ++I 
Sbjct: 682 PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIE 741

Query: 408 FNNVIQA 414
           F  +I +
Sbjct: 742 FAEIIAS 748



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 4/206 (1%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           L   E   KF     S+G++  +  ++ +I    ++N    A  +   M + G  P+  T
Sbjct: 772 LEAHELVKKF----KSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFT 827

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           + +L++++ KS R++E L+V ++M R G +    TYN ++ GL    R+E+A ++  N+ 
Sbjct: 828 YNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLM 887

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           + G  P   TY  ++DG  K GR  +A  L NE +E G   N   +N L NG+   G   
Sbjct: 888 SQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTE 947

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLN 303
           K   L + M  +   PD  SY+ +++
Sbjct: 948 KVCHLFQDMVDQGINPDIKSYTIIID 973



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 136/296 (45%), Gaps = 7/296 (2%)

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           GR+ +  EV D M R   K N+ T+  +  GL   G +  A   L  +K  G+  + YTY
Sbjct: 139 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 198

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
             ++    K G   EA+E+    +  GV P+V T++ L   + K       + LL+ M+ 
Sbjct: 199 NGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 258

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
               P+  SY+  +  L +  +   A  I  +M   G + D      L++ LC     + 
Sbjct: 259 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLC-----DA 313

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-GHIPRTIT 407
             + DA  VF KM K     D  TY  ++   G    + ++++ + +A++  G+    + 
Sbjct: 314 GRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS-QSVMEIWNAMKADGYNDNVVA 372

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +  VI ALC  G++ +AL +   M +   +P + SY+ LI+   + ++  DA  L+
Sbjct: 373 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 428



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 145/372 (38%), Gaps = 5/372 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E   +F S A    +A  + + + M+          +  +V D M       NV TF  +
Sbjct: 107 EALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAI 166

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
              L   G L+ A   L  M   G   N  TYN L+  L   G   EA E+   +  DG+
Sbjct: 167 FGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGV 226

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P V TY+ +M  F K       + LL E    GV PNV ++        +     +   
Sbjct: 227 VPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYR 286

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +L  M+   C PD I+++ L+  L   G+I  A  +F +M +   + D     +LL    
Sbjct: 287 ILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLL---- 342

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
              + +    +   +++  M       +   Y  VI  L +  +  EAL       + G 
Sbjct: 343 -DKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 401

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           +P   ++N++I       +   AL L   M  H   P+  ++ + I    +  +S  A  
Sbjct: 402 VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 461

Query: 462 LYGAALKQGVIP 473
            Y     +G++P
Sbjct: 462 RYELMKSKGIVP 473



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 5/217 (2%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+  LCK  +  EA E++ +    G       YN L+ GL     ++ A  +   +K  G
Sbjct: 761 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 820

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
             PD +TY  ++D   K  R  E +++  E   +G     VT+NT+ +G  K     + +
Sbjct: 821 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 880

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            L   +  +   P   +Y  LL+GLLK G+I  A ++F EM+ +G + +  + N LL G 
Sbjct: 881 DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 940

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
            +    EK        +F+ M  +    D  +Y I+I
Sbjct: 941 RIAGNTEK-----VCHLFQDMVDQGINPDIKSYTIII 972



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 112/270 (41%), Gaps = 1/270 (0%)

Query: 61  IKASPLKERIDIF-DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           +K   +KE + I  D   + G+    S  + L+  ++     E +++F    +S G+  +
Sbjct: 695 VKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLD 754

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            +    +I+  C +    EA +++      G       +  L+  L     +  A  +  
Sbjct: 755 DFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFA 814

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M  +GC P+  TYN LL  +    R+EE  ++   +   G +    TY  ++ G  K  
Sbjct: 815 EMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSR 874

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R  +A++L    + +G +P   T+  L +G  K G       L   M +  C  +   Y+
Sbjct: 875 RLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYN 934

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            LLNG    G       +F++MV  G   D
Sbjct: 935 ILLNGHRIAGNTEKVCHLFQDMVDQGINPD 964


>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
          Length = 861

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 209/424 (49%), Gaps = 31/424 (7%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N  L A V  +    AV  ++  +  G   + P+  T+ I+I 
Sbjct: 37  VFDELLRRGRGASIYGLNRAL-ADVARHSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
           C C           +  +   G+     TFT L+  LC   R  +A++ VL +M  +GC 
Sbjct: 96  CCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---GLKPDVYTYTAVMDGFCKVGRSNEA 244
           PN+ +YN LL GLC   R +EA E+L  + +D   G  PDV +YT V++GF K G S++A
Sbjct: 156 PNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 245 MELLNEAIERGVTPNVVTFNTLFNG------------YCKEGTPMKGVGLLKLMKKRNCL 292
               +E ++RG+ P+VVT++++               +CKEG  ++   L  LM +    
Sbjct: 216 YSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVK 275

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD I+YSTL++G    GK+  A+ +   MV  G + +    ++L+ G C  S      +E
Sbjct: 276 PDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR-----ME 330

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           DA  +F++M       D  TY I+++ L + ++T  A        E G      T+N ++
Sbjct: 331 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 390

Query: 413 QALCGEGKIDKALLL---LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
             LC     D AL +   L LM    K+ +RT ++++I  L ++ ++ +A  L+ A    
Sbjct: 391 HGLCKNKLTDDALQMFQNLCLM--DLKLEART-FNIMIDALLKVGRNDEAKDLFVAFSSN 447

Query: 470 GVIP 473
           G++P
Sbjct: 448 GLVP 451



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 143/316 (45%), Gaps = 17/316 (5%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC------- 129
           +  G+   V  +  ++       + + A   + E    G+ P+  T+S +I         
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAM 247

Query: 130 -----YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
                +C +    E+ K+ D M   G  P++ T++ L++  C +G++ EA+++L  M  +
Sbjct: 248 DKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSV 307

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G KPN  TY+ L+ G C + R+E+A  +   +++ G+ PD+ TY  ++ G  +  R+  A
Sbjct: 308 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 367

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            EL     E G    + T+N + +G CK       + + + +   +   +  +++ +++ 
Sbjct: 368 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 427

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           LLK G+   A  +F       F  +  + N     L  ++   + LLE+  Q+F  M   
Sbjct: 428 LLKVGRNDEAKDLF-----VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 482

Query: 365 VSVTDPGTYGIVIRTL 380
               D G    ++R L
Sbjct: 483 GCTVDSGMLNFIVREL 498



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 147/357 (41%), Gaps = 64/357 (17%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV--LDQMGRIGC---KPNIQT 192
           +AR V D +   G   ++     L  +L    R   A  V   ++M R G     P++ T
Sbjct: 33  DARHVFDELLRRGRGASIYG---LNRALADVARHSPAAAVSRYNRMARAGADEVTPDLCT 89

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEA 251
           Y  L+   C  GR++  +  L NV   G + +  T+T ++ G C   R+++AM++ L   
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM---KKRNCLPDKISYSTLLNGLLKW 308
            E G  PNV ++N L NG C E    + + LL +M   +     PD +SY+T++NG  K 
Sbjct: 150 TELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 209

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G    A S + EM              L RG+                          + 
Sbjct: 210 GDSDKAYSTYHEM--------------LDRGI--------------------------LP 229

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHA------------IEMGHIPRTITFNNVIQALC 416
           D  TY  +I  L KG+  D+   H                + +G  P  IT++ +I   C
Sbjct: 230 DVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 289

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             GK+D+A+ LL  M      P+  +Y  LI    ++ +  DA  L+      GV P
Sbjct: 290 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 346



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 110/239 (46%)

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           K F      G+ P+  T+S +I  YC      EA K++  M   G  PN  T++ L+N  
Sbjct: 264 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 323

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK  R+++AL +  +M   G  P+I TYN +L+GL    R   A E+ + +   G + ++
Sbjct: 324 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 383

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            TY  ++ G CK   +++A+++        +     TFN + +   K G   +   L   
Sbjct: 384 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 443

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
                 +P+  +Y  +   ++  G +     +F  M   G  VD  M+N ++R L  ++
Sbjct: 444 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRA 502



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 4/236 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + + G    +  ++ L+    +  + + A+K  S   S GL PN+ T+S +I  YC
Sbjct: 265 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 324

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             +   +A  +   M  +G  P++ T+ I++  L ++ R   A E+  ++   G +  + 
Sbjct: 325 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 384

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN +L GLC     ++A +M  N+    LK +  T+  ++D   KVGR++EA +L    
Sbjct: 385 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 444

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
              G+ PN  T+  +      +G   +   L   M+   C  D    S +LN +++
Sbjct: 445 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD----SGMLNFIVR 496


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 166/331 (50%), Gaps = 7/331 (2%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++S  I   C K    EA ++   M + G  P+  T+ IL+N LCK  +L+  + ++D+M
Sbjct: 93  SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM 152

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P + TY  L+ G C  GRV+ A ++L  +++ G+ P+  TYTA++ G C  G  
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEV 212

Query: 242 NEAMELLNEAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
             A+ +L E   RG    PNVVT+  L +G C++G    G+  L  M    C P+  +Y+
Sbjct: 213 ERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYT 272

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L++GL + G    A  +  EMV  G E+D  + NSL+ GLC K  E    L+ A ++  
Sbjct: 273 ALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLC-KMGE----LDFAREMQI 327

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            M +K    D  TY  +I+ L      DEAL  +      G +P ++T+  +I       
Sbjct: 328 LMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQAD 387

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           + D AL L+  M  +  +P+   Y +L   L
Sbjct: 388 RTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 158/302 (52%), Gaps = 7/302 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++ F E    G AP+S+T++I+I   C          ++D M   G+ P V T+T L++
Sbjct: 110 AMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIH 169

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML--MNVKNDGL 221
             C +GR+  A+++LD+M   G  PN  TY  L++GLC  G VE A  +L  M ++ +  
Sbjct: 170 GFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNEC 229

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P+V TYT ++ G C+ G     ME L+E I  G  PN  T+  L +G C++G+ ++   
Sbjct: 230 CPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAV 289

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           LL  M    C  D + Y++L++GL K G++  A  +   MV  G   D     SL++GLC
Sbjct: 290 LLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLC 349

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                +  LL++A  + ++M  K  V +  TY  +I    +  +TD AL  ++     G 
Sbjct: 350 -----DAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGL 404

Query: 402 IP 403
           +P
Sbjct: 405 MP 406



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 161/327 (49%), Gaps = 7/327 (2%)

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           N    +V +++  +N LCK G++ EA+E+  +M   G  P+  TYN L+ GLC   ++E 
Sbjct: 85  NSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEM 144

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
              ++  ++  G  P V TYT ++ GFC  GR + AM++L+E   RG+TPN VT+  L  
Sbjct: 145 GVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQ 204

Query: 269 GYCKEGTPMKGVGLLKLMKKRN--CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
           G C  G   + + +LK MK R   C P+ ++Y+ L++GL + G     +    EM+  G 
Sbjct: 205 GLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGC 264

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             +     +L+ GLC K       LE A  +  +M       D   Y  +I  L K  + 
Sbjct: 265 FPNNATYTALIHGLCQKG----SFLEAAV-LLNEMVAIGCELDVVIYNSLIDGLCKMGEL 319

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D A       +E G  P   T+ ++IQ LC  G +D+AL L+  M     +P+  +Y  L
Sbjct: 320 DFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTL 379

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I    Q +++  A  L       G++P
Sbjct: 380 INGFTQADRTDHALQLVNEMKSNGLMP 406



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 138/267 (51%), Gaps = 2/267 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + L+  + + D ++  G + +V  +  L+         + A+    E    G+ PN+ 
Sbjct: 138 KDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTV 197

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYH--PNVTTFTILVNSLCKSGRLKEALEVLD 179
           T++ +I+  C+  +   A  V+  M   G    PNV T+T L++ LC+ G  +  +E LD
Sbjct: 198 TYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLD 257

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M   GC PN  TY  L+ GLC  G   EA  +L  +   G + DV  Y +++DG CK+G
Sbjct: 258 EMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMG 317

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
             + A E+    +E+GV P+V T+ +L  G C  G   + +GL++ M+ +  +P+ ++Y+
Sbjct: 318 ELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYT 377

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGF 326
           TL+NG  +  +   A+ +  EM   G 
Sbjct: 378 TLINGFTQADRTDHALQLVNEMKSNGL 404



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 151/321 (47%), Gaps = 7/321 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E ++IF  +++ G+      +N L+  L    + E  V    E  + G +P   
Sbjct: 103 KKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVV 162

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C       A  ++D M   G  PN  T+T L+  LC  G ++ A+ VL +M
Sbjct: 163 TYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEM 222

Query: 182 GRIG--CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
              G  C PN+ TY  L+ GLC  G  E   E L  +   G  P+  TYTA++ G C+ G
Sbjct: 223 KLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKG 282

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
              EA  LLNE +  G   +VV +N+L +G CK G       +  LM ++   PD  +Y+
Sbjct: 283 SFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYT 342

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           +L+ GL   G +  A+ + +EM   G   +     +L+ G     + + D  + A Q+  
Sbjct: 343 SLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLING-----FTQADRTDHALQLVN 397

Query: 360 KMTKKVSVTDPGTYGIVIRTL 380
           +M     +     Y I+ ++L
Sbjct: 398 EMKSNGLMPAGDIYKILFKSL 418


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 193/420 (45%), Gaps = 8/420 (1%)

Query: 61  IKASPLKERIDIFD-SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           +K    +E   +FD ++  D  N  +  +N LL  L    +   A   + +    GLAP 
Sbjct: 430 LKVESREEASKLFDEAVACDIAN--IFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPT 487

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             +++ MI  +C + +   A  V   M D G  PNV T++IL++   K+G  + A  V D
Sbjct: 488 KVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFD 547

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M      P+  TYN  + GLC VGR  EA +ML      G  P   TY ++MDGF K G
Sbjct: 548 RMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEG 607

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
             + A+    E  E GV+PNV+T+ TL NG+CK       + +   M+ +    D  +Y 
Sbjct: 608 SVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYG 667

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L++G  K   I  A  +F E++  G   +  + NSL+ G     +   + +E A  + +
Sbjct: 668 ALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISG-----YRNLNNMEAALNLQK 722

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M  +    D  TY  +I  L K  +   AL         G IP  I +  +I  LCG+G
Sbjct: 723 RMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKG 782

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           +++ A  +L  M   +  P+   Y+ LI    +     +A  L+   L +G+ P     D
Sbjct: 783 QLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYD 842



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 192/422 (45%), Gaps = 41/422 (9%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   + E  ++++ +   G +      + ++ A +  N +E A KFF EA S G+  ++
Sbjct: 220 VKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDA 279

Query: 121 WTFSIMIRCYC-----------------------------------NKNDFFEARKVIDC 145
             +SI+I+ +C                                    + +  EA ++ D 
Sbjct: 280 AAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDE 339

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G   NV   T LV   CK  +L  ALE  D+M   G  PN  TY  L++  C  G 
Sbjct: 340 MVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGN 399

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           + +AY++   +KN  + P V+   +++ GF KV    EA +L +EA+   +  N+ T+N+
Sbjct: 400 MAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNS 458

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +  CKEG   +   L + M  +   P K+SY++++ G  + G +  A S+F +M+  G
Sbjct: 459 LLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG 518

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            +      N +   + M  + +    E A+ VF++M  +  V    TY I I  L K  +
Sbjct: 519 LKP-----NVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGR 573

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           T EA   L   +E G +P  +T+N+++     EG +  AL     M E    P+  +Y  
Sbjct: 574 TSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTT 633

Query: 446 LI 447
           LI
Sbjct: 634 LI 635



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 106/201 (52%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           + ++  G    ++ +  L+       + ETA   FSE    GL+PNS  ++ +I  Y N 
Sbjct: 652 NEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNL 711

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
           N+   A  +   M   G   ++ T+T L++ L K GRL  AL++  +M   G  P+I  Y
Sbjct: 712 NNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIY 771

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
             L+ GLC  G++E A ++L  ++ D + P+V  Y A++ G  K G   EA  L NE ++
Sbjct: 772 TVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLD 831

Query: 254 RGVTPNVVTFNTLFNGYCKEG 274
           +G+TPN  T++ L NG  K G
Sbjct: 832 KGLTPNDTTYDILINGKIKGG 852



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 183/401 (45%), Gaps = 13/401 (3%)

Query: 53  QAQRFVDRI---KASPLKE-RIDIF-DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           QAQ  ++R     + P+    +D F  S K+   +  +  +N LL + +  N+   A+  
Sbjct: 137 QAQNLLNRFISGDSGPMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGC 196

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F+      + P     + ++      +  +EAR+V + M   G H +  T  I++ +  K
Sbjct: 197 FNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLK 256

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
               +EA +   +    G K +   Y+ +++  C    VE A  +L ++++ G  P   T
Sbjct: 257 DNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGT 316

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           +T+V+    K G   EA+ L +E +  GV  NVV   TL  GYCK+   +  +     M 
Sbjct: 317 FTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMN 376

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG-LCMKSWE 346
           +    P++++Y+ L+    K G +  A  ++ +M          ++NSL+RG L ++S E
Sbjct: 377 ENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESRE 436

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
           E      A ++F++      + +  TY  ++  L K  K  EA       ++ G  P  +
Sbjct: 437 E------ASKLFDEAV-ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKV 489

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           ++N++I   C +G +D A  +   M +    P+  +Y +L+
Sbjct: 490 SYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILM 530



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 123/252 (48%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++   +      +A+  + E    G++PN  T++ +I  +C  N+   A K+ + M 
Sbjct: 596 YNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMR 655

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G   ++  +  L++  CK   ++ A  +  ++   G  PN   YN L+ G   +  +E
Sbjct: 656 NKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNME 715

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A  +   +  +G+  D+ TYT ++DG  K GR   A++L +E   +G+ P+++ +  L 
Sbjct: 716 AALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLI 775

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG C +G       +L  M++ +  P+   Y+ L+ G  K G ++ A  +  EM+  G  
Sbjct: 776 NGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLT 835

Query: 328 VDERMMNSLLRG 339
            ++   + L+ G
Sbjct: 836 PNDTTYDILING 847



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 11/304 (3%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK   +   +  +  + + G + +V  +  L+      N  + A+K  +E  + GL  + 
Sbjct: 604 IKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDI 663

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             +  +I  +C K D   A  +   + D G  PN   +  L++       ++ AL +  +
Sbjct: 664 AAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKR 723

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G   ++QTY  L+ GL   GR+  A ++   +   G+ PD+  YT +++G C  G+
Sbjct: 724 MLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQ 783

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A ++L E     +TPNV  +N L  G+ K G   +   L   M  +   P+  +Y  
Sbjct: 784 LENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDI 843

Query: 301 LLNGLLKWGK--IRPAVSI-FKE---MVRFGFE-----VDERMMNSLLRGLCMKSWEEKD 349
           L+NG +K G   ++  +S+ FK+   M R   +     V E+ +N  LR    K  E+++
Sbjct: 844 LINGKIKGGNSALKSLLSLKFKDGKGMKRINEQDSIKKVIEKAVNKYLRPEAQKMIEKEE 903

Query: 350 LLED 353
            ++D
Sbjct: 904 AIQD 907


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 184/393 (46%), Gaps = 7/393 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +   +D F  +     N  V  ++ L+  L      + AV    E  + G  PN  
Sbjct: 186 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPV 245

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+++I       D   A K++D MF  G  PN  T+  L++ LC  G+L +AL +L++M
Sbjct: 246 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 305

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C PN  TY  ++ GL    R E+   +LM+++  G K + Y Y++++ G  K G+S
Sbjct: 306 VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS 365

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+ L  E  E+G  PNVV +    +G C++  P +   +L+ M  +  LP+  +YS+L
Sbjct: 366 ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSL 425

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G  K G  + A+ ++KEM+      +    + LL GLC     E   L +A  V+  M
Sbjct: 426 MKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLC-----ESGRLREALTVWTHM 480

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEA--LIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
             +    D   Y  +I+ L      D+   L +     E    P  +T+N +  ALC + 
Sbjct: 481 LGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQD 540

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            + +A+ LL  M +    P   + ++ +  L +
Sbjct: 541 NLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRE 573



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 191/388 (49%), Gaps = 7/388 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++ AL  L + + AV  F E       P+ +T+S ++   C +    EA  ++D M 
Sbjct: 177 YNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 236

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PN  TF +L+++L K+G L  A +++D M   GC PN  TYN L+ GLC  G+++
Sbjct: 237 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 296

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +L  + +    P+  TY  +++G  K  R+ + + +L    ERG   N   +++L 
Sbjct: 297 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 356

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G  KEG     V L K M ++ C P+ + Y   ++GL +  K   A  I +EM+  GF 
Sbjct: 357 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 416

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +    +SL++G   K   +K +L     V+++M  +    +     +++  L +  +  
Sbjct: 417 PNAFTYSSLMKGFFKKGDSQKAIL-----VWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 471

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM--YEHAKIPSRTSYDM 445
           EAL    H +  G  P  + ++++I+ LC  G +DK L L + M   E    P   +Y++
Sbjct: 472 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 531

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           L   L + +    A  L  + L +G  P
Sbjct: 532 LFNALCRQDNLTRAIDLLNSMLDEGCDP 559



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 202/406 (49%), Gaps = 9/406 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCY 130
           + D +K++G   + + F  +  A    +    AV FF   A+         +F+ ++   
Sbjct: 87  VLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVI 146

Query: 131 CNKNDFFEARKVIDCMF---DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             + DF  A K    +F     G+ PN+ T+ +++ +LCK G++  A++   +M    C 
Sbjct: 147 IQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCN 206

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++ TY+ L+ GLC   RV+EA  +L  ++ +G  P+  T+  ++D   K G  + A +L
Sbjct: 207 PDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKL 266

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           ++    +G  PN VT+NTL +G C +G   K + LL+ M    C+P++++Y T++NGL+K
Sbjct: 267 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVK 326

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
             +    V I   M   G + +E + +SL+ GL  +        E+A +++++M +K   
Sbjct: 327 QRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS-----ENAVRLWKEMAEKGCK 381

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            +   YG  I  L + +K DEA   L   +  G +P   T++++++    +G   KA+L+
Sbjct: 382 PNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILV 441

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              M       +     +L+  L +  +  +A  ++   L +G+ P
Sbjct: 442 WKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKP 487



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 155/334 (46%), Gaps = 25/334 (7%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K    ++ + I  S+++ G   +   ++ L+  L    + E AV+ + E +  G  PN 
Sbjct: 325 VKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNV 384

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             +   I   C      EA  ++  M   G+ PN  T++ L+    K G  ++A+ V  +
Sbjct: 385 VVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKE 444

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M     + N+   + LL GLC  GR+ EA  +  ++  +GLKPDV  Y++++ G C VG 
Sbjct: 445 MMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGS 504

Query: 241 SNEAMELLNE--AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
            ++ ++L  E    E    P+VVT+N LFN  C++    + + LL  M    C PD ++ 
Sbjct: 505 VDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTC 564

Query: 299 STLLNGLLKWGKIRPAVS--IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +  L  L +  +I P     +F         +DE ++  L R        E+ L   A +
Sbjct: 565 NIFLETLRE--RINPPQDGRLF---------LDELVVRLLKR--------ERKL--SALR 603

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
           + E+M  +    +P T+  VI+   K K+  E +
Sbjct: 604 IVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 637



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 19/250 (7%)

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLNG 304
           ++L+     G       F  +F    K   P + V     M    +C     S++++LN 
Sbjct: 86  QVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNV 145

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           +++ G    A   +  +  FG        N L   L +K+  +   ++ A   F +M  K
Sbjct: 146 IIQEGDFSYAFKFYLHV--FGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLK 203

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY  ++  L K ++ DEA+  L      G +P  +TFN +I AL   G + +A
Sbjct: 204 NCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRA 263

Query: 425 LLLLFLMYEHAKIPSRTSYDMLIT------KLDQ----LEKSYDACAL-----YGAALKQ 469
             L+  M+    +P+  +Y+ LI       KLD+    LEK   +  +     YG  +  
Sbjct: 264 AKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTII-N 322

Query: 470 GVIPQRKPQD 479
           G++ QR+ +D
Sbjct: 323 GLVKQRRAED 332


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 190/388 (48%), Gaps = 5/388 (1%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + +N +++AL      +      S+    GL PN  T++ ++  +C   +   A  ++  
Sbjct: 202 ASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILAR 261

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G  PNV TFT LV  L   GR+ +AL++   M   G  P+  +YN L++GLC VG 
Sbjct: 262 MVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGD 321

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++ A  +L +++  G  P+V TY+ ++DGF K G    A+ + N+    G  PNVV +  
Sbjct: 322 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 381

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + + +CK+    +   L+  M   NC P+ ++++TL+  L    ++  A+ +F EM R G
Sbjct: 382 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 441

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              + R  N L+ GL    + E +  +  + V E  +  + ++   TY  V+  L + + 
Sbjct: 442 CVPNGRTYNELIHGL----FREGNCGDALHMVTEMQSHGIELSLV-TYNTVVSGLCQTRM 496

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           + EA++ +   I  G  P   TF+ +I A C EG++  A  +L  M       +   Y +
Sbjct: 497 SREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTI 556

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           L+ +L   +K  DA       L +G+ P
Sbjct: 557 LMAELCNQDKLVDAMTYLLKMLYEGIYP 584



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 170/378 (44%), Gaps = 45/378 (11%)

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C  N    ARK++D M   G  P+  T+  +V+ LCK  RL EA EVL  M      P  
Sbjct: 147 CQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVA 201

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +YN ++  LC   R++E + ++ ++   GL+P+V TYT ++D FCK G    A  +L  
Sbjct: 202 ASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILAR 261

Query: 251 AIERGVTPNVVTF-----------------------------------NTLFNGYCKEGT 275
            +  G TPNVVTF                                   N L  G C  G 
Sbjct: 262 MVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGD 321

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
                 +L  M++  C P+  +YSTL++G  K G +  A+SI+ +M R G + +  +  +
Sbjct: 322 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 381

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           ++   C     +K +   A  + +KM  +    +  T+  +IR+L   ++   AL   H 
Sbjct: 382 MVDVFC-----KKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 436

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
               G +P   T+N +I  L  EG    AL ++  M  H    S  +Y+ +++ L Q   
Sbjct: 437 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRM 496

Query: 456 SYDACALYGAALKQGVIP 473
           S +A    G  + QG+ P
Sbjct: 497 SREAMVFVGKMIVQGIQP 514



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 138/275 (50%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK    I +S+++ G   +V  ++ L+       +   A+  +++ S  G  PN   ++ 
Sbjct: 322 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 381

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           M+  +C K  F +A+ +ID M      PN  TF  L+ SLC   R+  AL V  +M R G
Sbjct: 382 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 441

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN +TYN L+ GL   G   +A  M+  +++ G++  + TY  V+ G C+   S EAM
Sbjct: 442 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 501

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
             + + I +G+ PN  TF+ + + YCKEG       +L  M   NC  + + Y+ L+  L
Sbjct: 502 VFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL 561

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
               K+  A++   +M+  G   +    N L+RG+
Sbjct: 562 CNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 596


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 223/479 (46%), Gaps = 68/479 (14%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K+   +E ++++  +  DG   SV  ++ L++A     + ET +    E  ++G+ PN 
Sbjct: 171 VKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNV 230

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           ++++I IR       F EA +++  M + G  P+V T T+L+  LC +GR+ +A +V  +
Sbjct: 231 YSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWK 290

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M +   KP+  TY  LL      G  +   E+   +K DG   +V  YTAV+D  C+VGR
Sbjct: 291 MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 350

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNG------------------------------- 269
             EA+E+ +E  ++G+ P   ++N+L +G                               
Sbjct: 351 VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVL 410

Query: 270 ----YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
               Y K G  +K +   +LMK +  +PD ++ + +L GL K G++  A  +F E+   G
Sbjct: 411 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 470

Query: 326 FEVDERMMNSLLRGLCMKS--WEEK-----DLLE------------------------DA 354
              D      +++  C K+  ++E      D++E                        +A
Sbjct: 471 VSPDTITYTMMIK-CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 529

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
           +++F ++ +       GTY  ++  LG+  K  E +  L       + P  IT+N ++  
Sbjct: 530 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 589

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LC  G ++ AL +L+ M     IP  +SY+ +I  L + E+  +A +++   +K+ +IP
Sbjct: 590 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF-CQMKKVLIP 647



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 181/388 (46%), Gaps = 5/388 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +K+ G   +   +N L+  LV       A++ +      G+ P+  T+S+++  +  + D
Sbjct: 151 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 210

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
                 ++  M  +G  PNV ++TI +  L ++ R  EA  +L +M   GCKP++ T+  
Sbjct: 211 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTV 270

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L++ LC  GR+ +A ++   +K    KPD  TY  ++D F   G S   ME+ N     G
Sbjct: 271 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 330

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
              NVV +  + +  C+ G   + + +   MK++  +P++ SY++L++G LK  +   A+
Sbjct: 331 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 390

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            +FK M     ++     N     L +  + +      A Q +E M  K  V D      
Sbjct: 391 ELFKHM-----DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA 445

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           V+  L K  +   A    H    MG  P TIT+  +I+      K D+A+ + + M E+ 
Sbjct: 446 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 505

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALY 463
            +P   + + LI  L +  +  +A  ++
Sbjct: 506 CVPDVLAVNSLIDTLYKAGRGDEAWRIF 533



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 169/353 (47%), Gaps = 9/353 (2%)

Query: 98   LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
            L   E   KF     S+G++  +  ++ +I    ++N    A  +   M + G  P+  T
Sbjct: 737  LEAHELVKKF----KSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFT 792

Query: 158  FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
            + +L++++ KS R++E L+V ++M R G +    TYN ++ GL    R+E+A ++  N+ 
Sbjct: 793  YNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLM 852

Query: 218  NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
            + G  P   TY  ++DG  K GR  +A  L NE +E G   N   +N L NG+   G   
Sbjct: 853  SQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTE 912

Query: 278  KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
            K   L + M  +   PD  SY+ +++ L K G++   ++ F++++  G E D    N L+
Sbjct: 913  KVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLI 972

Query: 338  RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
             GL      +   LE+A  +F +M KK  V +  TY  +I  LGK  K  EA       +
Sbjct: 973  DGL-----GKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1027

Query: 398  EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              G  P   T+N +I+     G  D A      M     +P+ ++Y  L  +L
Sbjct: 1028 TKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPNQL 1080



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 128/245 (52%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            +K+  L++ ID++ ++   G + +   +  LL  L+     E A   F+E   YG   N 
Sbjct: 836  VKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANC 895

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
              ++I++  +    +  +   +   M D G +P++ ++TI++++LCK+G+L + L    Q
Sbjct: 896  TIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQ 955

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            +  +G +P++ TYN L+ GL    R+EEA  +   ++  G+ P++YTY +++    K G+
Sbjct: 956  LLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGK 1015

Query: 241  SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + EA ++  E + +G  PNV T+N L  GY   G+          M    CLP+  +Y  
Sbjct: 1016 AAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQ 1075

Query: 301  LLNGL 305
            L N L
Sbjct: 1076 LPNQL 1080



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 188/391 (48%), Gaps = 10/391 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++I++++K DG N +V  +  ++ AL  +     A++ F E    G+ P  ++++ +I  
Sbjct: 320 MEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG 379

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +   + F +A ++   M  +G  PN  T  + +N   KSG   +A++  + M   G  P+
Sbjct: 380 FLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 439

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           +   N +L GL   GR+  A  +   +K  G+ PD  TYT ++    K  + +EA+++  
Sbjct: 440 VVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFY 499

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           + IE    P+V+  N+L +   K G   +   +   +K+ N  P   +Y+TLL GL + G
Sbjct: 500 DMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREG 559

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K++  + + +EM    +  +    N++L  LC     +   + DA  +   MT K  + D
Sbjct: 560 KVKEVMHLLEEMYHSNYPPNLITYNTILDCLC-----KNGAVNDALDMLYSMTTKGCIPD 614

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL- 428
             +Y  VI  L K ++ +EA   +   ++   IP   T   ++ +    G + +AL ++ 
Sbjct: 615 LSSYNTVIYGLVKEERYNEAF-SIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIK 673

Query: 429 -FLMYEHAKIPSRTSYDML--ITKLDQLEKS 456
            + +   +K    + + ++  I K   +EKS
Sbjct: 674 DYFLQPGSKTDRSSCHSLMEGILKKAGIEKS 704



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 187/410 (45%), Gaps = 7/410 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KAS   E + IF  + ++     V   N L+  L      + A + F +     L P   
Sbjct: 487 KASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDG 546

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++     +    E   +++ M+ + Y PN+ T+  +++ LCK+G + +AL++L  M
Sbjct: 547 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 606

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC P++ +YN ++ GL    R  EA+ +   +K   L PD  T   ++  F K+G  
Sbjct: 607 TTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLM 665

Query: 242 NEAMELLNEA-IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            EA+ ++ +  ++ G   +  + ++L  G  K+    K +   +++       D      
Sbjct: 666 KEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCP 725

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+  L K  K   A  + K+   FG  +   + NSL+ GL      +++L++ A  +F +
Sbjct: 726 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLV-----DENLIDIAEGLFAE 780

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +     D  TY +++  +GK  + +E L         G+    +T+N +I  L    +
Sbjct: 781 MKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR 840

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +++A+ L + +      P+  +Y  L+  L +  +  DA  L+   L+ G
Sbjct: 841 LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 890



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 149/313 (47%), Gaps = 5/313 (1%)

Query: 161  LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
            L+  LCK  +  EA E++ +    G       YN L+ GL     ++ A  +   +K  G
Sbjct: 726  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 785

Query: 221  LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
              PD +TY  ++D   K  R  E +++  E   +G     VT+NT+ +G  K     + +
Sbjct: 786  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 845

Query: 281  GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
             L   +  +   P   +Y  LL+GLLK G+I  A ++F EM+ +G + +  + N LL G 
Sbjct: 846  DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 905

Query: 341  CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
             +    EK        +F+ M  +    D  +Y I+I TL K  + ++ L +    +EMG
Sbjct: 906  RIAGNTEK-----VCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMG 960

Query: 401  HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
              P  IT+N +I  L    ++++A+ L   M +   +P+  +Y+ LI  L +  K+ +A 
Sbjct: 961  LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAG 1020

Query: 461  ALYGAALKQGVIP 473
             +Y   L +G  P
Sbjct: 1021 KMYEELLTKGWKP 1033



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 154/341 (45%), Gaps = 40/341 (11%)

Query: 68   ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
            E  ++    K  G +     +N L+  LV  N  + A   F+E    G  P+ +T+++++
Sbjct: 738  EAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 797

Query: 128  RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV---------- 177
                      E  KV + M   GY     T+  +++ L KS RL++A+++          
Sbjct: 798  DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 857

Query: 178  ------------LDQMGRI-------------GCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
                        L + GRI             GCK N   YN LL G    G  E+   +
Sbjct: 858  PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHL 917

Query: 213  LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              ++ + G+ PD+ +YT ++D  CK G+ N+ +    + +E G+ P+++T+N L +G  K
Sbjct: 918  FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGK 977

Query: 273  EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                 + V L   M+K+  +P+  +Y++L+  L K GK   A  +++E++  G++ +   
Sbjct: 978  SKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFT 1037

Query: 333  MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
             N+L+RG  +         + AY  + +M     + +  TY
Sbjct: 1038 YNALIRGYSVSGST-----DSAYAAYGRMIVGGCLPNSSTY 1073



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E +++FD +K+ G       +N L+   +  +    A++ F     +G  PN +T  + I
Sbjct: 353 EALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFI 412

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             Y    +  +A +  + M   G  P+V     ++  L KSGRL  A  V  ++  +G  
Sbjct: 413 NYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVS 472

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TY  ++K      + +EA ++  ++  +   PDV    +++D   K GR +EA  +
Sbjct: 473 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRI 532

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             +  E  + P   T+NTL  G  +EG   + + LL+ M   N  P+ I+Y+T+L+ L K
Sbjct: 533 FYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 592

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G +  A+ +   M   G   D    N+++ GL      +++   +A+ +F +M KKV +
Sbjct: 593 NGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV-----KEERYNEAFSIFCQM-KKVLI 646

Query: 368 TDPGTYGIVIRTLGK------------------GKKTDEALIH--LHHAIEMGHIPRTIT 407
            D  T   ++ +  K                  G KTD +  H  +   ++   I ++I 
Sbjct: 647 PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIE 706

Query: 408 FNNVIQA 414
           F  +I +
Sbjct: 707 FAEIIAS 713



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 128/287 (44%), Gaps = 1/287 (0%)

Query: 40   AESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVML 98
            AE  +L   P        +D + K+  ++E + + + + + G   +   +N ++  LV  
Sbjct: 779  AEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKS 838

Query: 99   NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
               E A+  +    S G +P   T+  ++          +A  + + M + G   N T +
Sbjct: 839  RRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIY 898

Query: 159  TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
             IL+N    +G  ++   +   M   G  P+I++Y  ++  LC  G++ +       +  
Sbjct: 899  NILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLE 958

Query: 219  DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
             GL+PD+ TY  ++DG  K  R  EA+ L NE  ++G+ PN+ T+N+L     K G   +
Sbjct: 959  MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1018

Query: 279  GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
               + + +  +   P+  +Y+ L+ G    G    A + +  M+  G
Sbjct: 1019 AGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGG 1065



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 136/296 (45%), Gaps = 7/296 (2%)

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           GR+ +  EV D M R   K N+ T+  +  GL   G +  A   L  +K  G+  + YTY
Sbjct: 104 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 163

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
             ++    K G   EA+E+    +  GV P+V T++ L   + K       + LL+ M+ 
Sbjct: 164 NGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 223

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
               P+  SY+  +  L +  +   A  I  +M   G + D      L++ LC     + 
Sbjct: 224 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLC-----DA 278

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-GHIPRTIT 407
             + DA  VF KM K     D  TY  ++   G    + ++++ + +A++  G+    + 
Sbjct: 279 GRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS-QSVMEIWNAMKADGYNDNVVA 337

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +  VI ALC  G++ +AL +   M +   +P + SY+ LI+   + ++  DA  L+
Sbjct: 338 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 393



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 145/372 (38%), Gaps = 5/372 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E   +F S A    +A  + + + M+          +  +V D M       NV TF  +
Sbjct: 72  EALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAI 131

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
              L   G L+ A   L  M   G   N  TYN L+  L   G   EA E+   +  DG+
Sbjct: 132 FGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGV 191

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P V TY+ +M  F K       + LL E    GV PNV ++        +     +   
Sbjct: 192 VPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYR 251

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +L  M+   C PD I+++ L+  L   G+I  A  +F +M +   + D     +LL    
Sbjct: 252 ILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLL---- 307

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
              + +    +   +++  M       +   Y  VI  L +  +  EAL       + G 
Sbjct: 308 -DKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGI 366

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
           +P   ++N++I       +   AL L   M  H   P+  ++ + I    +  +S  A  
Sbjct: 367 VPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 426

Query: 462 LYGAALKQGVIP 473
            Y     +G++P
Sbjct: 427 RYELMKSKGIVP 438


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 174/368 (47%), Gaps = 40/368 (10%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   L+E     +S+   G    +     L+     + +   A +        G  P+ 
Sbjct: 95  VRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDV 154

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++++I   C+   + +A K++  M   G  P+V TF IL+N LC+ G L  A++VL++
Sbjct: 155 ITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEK 214

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + GC PN  +YN LL G C   ++E A E L  + + G  PD+ TY  ++   CK G+
Sbjct: 215 MPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGK 274

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A+ELLN+   +G +P ++T+NT+ +G  K G   +   LL  M+ +   PD I+YS+
Sbjct: 275 VDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSS 334

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+ GL + GK+  A+  F ++   G + +    N+++ GLC                   
Sbjct: 335 LVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLC------------------- 375

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
                                K +KTD A+  L + ++ G  P   ++  +I+ L  EG 
Sbjct: 376 ---------------------KARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGL 414

Query: 421 IDKALLLL 428
             +AL LL
Sbjct: 415 AKEALELL 422



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 168/341 (49%), Gaps = 5/341 (1%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           E  + ++ M   G  P++   T L+   CK G+ ++A  +++ +   G  P++ TYN L+
Sbjct: 102 EGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLI 161

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G+C  GR  +A ++L ++   G  P V T+  +++  C+ G    A+++L +  + G T
Sbjct: 162 SGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCT 221

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PN +++N L +G+CKE    + +  L  M  R C PD ++Y+TLL  L K GK+  AV +
Sbjct: 222 PNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVEL 281

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             ++   G        N+++ GL      ++     A ++ ++M  K    D  TY  ++
Sbjct: 282 LNQLSSKGCSPVLITYNTVIDGLSKVGKTDQ-----AAKLLDEMRAKGLKPDIITYSSLV 336

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L +  K DEA+   H    +G  P  IT+N ++  LC   K D+A+  L  M +    
Sbjct: 337 GGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCK 396

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQ 478
           P+  SY +LI  L     + +A  L      +GV+ +   +
Sbjct: 397 PTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSAE 437



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 5/270 (1%)

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G +EE +  L ++   G  PD+   T+++ GFCK+G++ +A  ++    + G  P+V+T+
Sbjct: 98  GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITY 157

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N L +G C  G  M    LL  M +R C P  ++++ L+N L + G +  A+ + ++M +
Sbjct: 158 NVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPK 217

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   +    N LL G C    +EK + E A +   KMT +    D  TY  ++  L K 
Sbjct: 218 HGCTPNSLSYNPLLHGFC----KEKKM-ERAIEYLGKMTSRGCYPDIVTYNTLLTALCKD 272

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            K D A+  L+     G  P  IT+N VI  L   GK D+A  LL  M      P   +Y
Sbjct: 273 GKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITY 332

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L+  L +  K  +A   +      GV P
Sbjct: 333 SSLVGGLSREGKVDEAIKFFHDLEVLGVKP 362


>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 952

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 209/424 (49%), Gaps = 31/424 (7%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N  L A V  +    AV  ++  +  G   + P+  T+ I+I 
Sbjct: 37  VFDELLRRGRGASIYGLNRAL-ADVARHSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
           C C           +  +   G+     TFT L+  LC   R  +A++ VL +M  +GC 
Sbjct: 96  CCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---GLKPDVYTYTAVMDGFCKVGRSNEA 244
           PN+ +YN LL GLC   R +EA E+L  + +D   G  PDV +YT V++GF K G S++A
Sbjct: 156 PNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 245 MELLNEAIERGVTPNVVTFNTLFNG------------YCKEGTPMKGVGLLKLMKKRNCL 292
               +E ++RG+ P+VVT++++               +CKEG  ++   L  LM +    
Sbjct: 216 YSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVK 275

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD I+YSTL++G    GK+  A+ +   MV  G + +    ++L+ G C  S      +E
Sbjct: 276 PDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR-----ME 330

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           DA  +F++M       D  TY I+++ L + ++T  A        E G      T+N ++
Sbjct: 331 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 390

Query: 413 QALCGEGKIDKALLL---LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
             LC     D AL +   L LM    K+ +RT ++++I  L ++ ++ +A  L+ A    
Sbjct: 391 HGLCKNKLTDDALQMFQNLCLM--DLKLEART-FNIMIDALLKVGRNDEAKDLFVAFSSN 447

Query: 470 GVIP 473
           G++P
Sbjct: 448 GLVP 451



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 143/316 (45%), Gaps = 17/316 (5%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC------- 129
           +  G+   V  +  ++       + + A   + E    G+ P+  T+S +I         
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAM 247

Query: 130 -----YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
                +C +    E+ K+ D M   G  P++ T++ L++  C +G++ EA+++L  M  +
Sbjct: 248 DKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSV 307

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G KPN  TY+ L+ G C + R+E+A  +   +++ G+ PD+ TY  ++ G  +  R+  A
Sbjct: 308 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 367

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            EL     E G    + T+N + +G CK       + + + +   +   +  +++ +++ 
Sbjct: 368 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 427

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           LLK G+   A  +F       F  +  + N     L  ++   + LLE+  Q+F  M   
Sbjct: 428 LLKVGRNDEAKDLF-----VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 482

Query: 365 VSVTDPGTYGIVIRTL 380
               D G    ++R L
Sbjct: 483 GCTVDSGMLNFIVREL 498



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 145/357 (40%), Gaps = 64/357 (17%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV--LDQMGRIGC---KPNIQT 192
           +AR V D +   G   ++     L  +L    R   A  V   ++M R G     P++ T
Sbjct: 33  DARHVFDELLRRGRGASIYG---LNRALADVARHSPAAAVSRYNRMARAGADEVTPDLCT 89

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEA 251
           Y  L+   C  GR++  +  L NV   G + +  T+T ++ G C   R+++AM++ L   
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM---KKRNCLPDKISYSTLLNGLLKW 308
            E G  PNV ++N L NG C E    + + LL +M   +     PD +SY+T++NG  K 
Sbjct: 150 TELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 209

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G                                          + AY  + +M  +  + 
Sbjct: 210 GDS----------------------------------------DKAYSTYHEMLDRGILP 229

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHA------------IEMGHIPRTITFNNVIQALC 416
           D  TY  +I  L KG+  D+   H                + +G  P  IT++ +I   C
Sbjct: 230 DVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 289

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             GK+D+A+ LL  M      P+  +Y  LI    ++ +  DA  L+      GV P
Sbjct: 290 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 346



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 109/238 (45%)

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           K F      G+ P+  T+S +I  YC      EA K++  M   G  PN  T++ L+N  
Sbjct: 264 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 323

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK  R+++AL +  +M   G  P+I TYN +L+GL    R   A E+ + +   G + ++
Sbjct: 324 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 383

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            TY  ++ G CK   +++A+++        +     TFN + +   K G   +   L   
Sbjct: 384 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 443

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
                 +P+  +Y  +   ++  G +     +F  M   G  VD  M+N ++R L  +
Sbjct: 444 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 501



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 113/238 (47%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + + G    +  ++ L+    +  + + A+K  S   S GL PN+ T+S +I  YC
Sbjct: 265 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 324

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             +   +A  +   M  +G  P++ T+ I++  L ++ R   A E+  ++   G +  + 
Sbjct: 325 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 384

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN +L GLC     ++A +M  N+    LK +  T+  ++D   KVGR++EA +L    
Sbjct: 385 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 444

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
              G+ PN  T+  +      +G   +   L   M+   C  D    + ++  LL+ G
Sbjct: 445 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 502



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 99/212 (46%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + E + +   +   G   +   ++ L+     ++  E A+  F E  S G++P+  T
Sbjct: 291 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 350

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+++          A+++   + ++G    ++T+ I+++ LCK+    +AL++   + 
Sbjct: 351 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLC 410

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
            +  K   +T+N ++  L  VGR +EA ++ +   ++GL P+ +TY  + +     G   
Sbjct: 411 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 470

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
           E  +L     + G T +    N +     + G
Sbjct: 471 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 502


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 194/416 (46%), Gaps = 31/416 (7%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN+LL+ L+  N  E A + F+E     +  + ++F IMI+  C      +  +V+  M 
Sbjct: 120 FNNLLILLIKSNFFEKAWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQME 178

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  PNV  +T L++  CK+G ++   ++  +MG +    N  TY  L+ G   +G  +
Sbjct: 179 EMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKK 238

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +  E+   +K  G+ P+VYTY +++   C  G+ N A EL +E  ERGV  NVVT+NTL 
Sbjct: 239 DGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLI 298

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G C+E   ++   L+  MK+    P+ ISY+TL++G    G +  A S+F +M   G  
Sbjct: 299 GGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS 358

Query: 328 VDERMMNSLLRG------------------------------LCMKSWEEKDLLEDAYQV 357
                 N L+ G                              + M +    D +E A+Q+
Sbjct: 359 PSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQI 418

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           +  M K   V D   YG++I  L       EA        EM   P  + +N +I   C 
Sbjct: 419 YSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCK 478

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           EG   +AL LL  M E+  +P+  SY+  I  L + EK  +A  L    ++ G+ P
Sbjct: 479 EGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKP 534



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 130/262 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L    ++FD +++ G   +V  +N L+  L        A +        GL+PN  +++ 
Sbjct: 272 LNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNT 331

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC+  +  +A  + + M  +G  P++ T+ IL+    ++       +++ +M   G
Sbjct: 332 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 391

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY  L+  L     +E+A+++  +++  GL  D+Y Y  ++ G C VG   EA 
Sbjct: 392 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 451

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L     E  + PN V +NT+  GYCKEG+  + + LLK M +   +P+  SY++ +  L
Sbjct: 452 KLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXIL 511

Query: 306 LKWGKIRPAVSIFKEMVRFGFE 327
            K  K   A  + K+M+  G +
Sbjct: 512 CKDEKWTEAEVLLKDMIELGLK 533



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 158/327 (48%), Gaps = 6/327 (1%)

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           + +  +V     ++N+  +S   ++AL   +QM   G  P   T+N LL  L      E+
Sbjct: 76  DSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEK 135

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A+ +    K + +K DVY++  ++ G C+VG  ++  E+L +  E G++PNVV + TL +
Sbjct: 136 AWRVFNETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLID 194

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G CK G   +G  L   M + + + ++ +Y+ L+NG  K G  +  + ++++M   G   
Sbjct: 195 GCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVP 254

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +    NS++   C         L +A+++F++M ++    +  TY  +I  L + ++  E
Sbjct: 255 NVYTYNSMICRCC-----NDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLE 309

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   +      G  P  I++N +I   C  G +DKA  L   M    + PS  +Y++LI 
Sbjct: 310 AERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIA 369

Query: 449 KLDQLEKSYDACALYGAALKQGVIPQR 475
              + + S     +      +G+ P +
Sbjct: 370 GFSEAKNSAGVTDMVREMEARGLSPSK 396



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 69/139 (49%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +++  +++   I+ S++K G    +  +  L+  L ++ + + A K F       L PN 
Sbjct: 407 VRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPND 466

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             ++ MI  YC +   + A +++  M +NG  PNV ++   +  LCK  +  EA  +L  
Sbjct: 467 VIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKD 526

Query: 181 MGRIGCKPNIQTYNCLLKG 199
           M  +G KP+I  +N + K 
Sbjct: 527 MIELGLKPSISIWNMISKA 545


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 214/459 (46%), Gaps = 52/459 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++   +F+ ++  G + +V  +  L+ A +   +   A   F      G  PN  
Sbjct: 270 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 329

Query: 122 TFSIMIRCYCNKNDFFEARKV----------------IDCMFDNGYHPNVTTFTILVNSL 165
           T+  ++   C   +  +A +V                  C   +   PNV T+  LV+ L
Sbjct: 330 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 389

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK+ ++  A E+LD M   GC+PN   Y+ L+ G C  G+++ A E+ + +   G  P V
Sbjct: 390 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV 449

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           +TYT+++D   K GR + AM++L++ ++   TPNVVT+  + +G C+ G   K + LL L
Sbjct: 450 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSL 509

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M+++ C P+ ++Y+ L++GL K GKI  ++ +F +M R G   +      L+  LC    
Sbjct: 510 MEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGL 569

Query: 346 EEKD--LLEDAYQ--------------------------VFEKMTKKVSVTDPGTYGIVI 377
            +K   LL +  Q                          + E+M    +V     YG++I
Sbjct: 570 LDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLI 629

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN-----VIQALCGEGKIDKALLLLFLMY 432
               K  + + A+  LH   EM  +P ++  +N     +IQALC   ++++A  L   M 
Sbjct: 630 DCFSKAGRLEIAM-ELHK--EMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 686

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
               +P  + +  LI  L +++K  +A  L      +GV
Sbjct: 687 RRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 193/454 (42%), Gaps = 52/454 (11%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I + +  +G N + S FN L+ +     +   A K  +  ++ G  P    ++I I   C
Sbjct: 99  IINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC 158

Query: 132 NKN-----DFFE-ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +      D  + A K+   M       N          LC  G+  +A +++ +M R G
Sbjct: 159 GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG 218

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY+ ++  LC+  +VE+A+ +   +K  G+ PDVYTYT ++D FCK G   +A 
Sbjct: 219 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 278

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  E    G +P VVT+  L + Y K     +   +   M    C P+ ++Y  L++GL
Sbjct: 279 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 338

Query: 306 LKWGKIRPAVSIFKEMV--------RFGFEVDER--------MMNSLLRGLC-------- 341
            K G I  A  ++ +++         F F  ++R           +L+ GLC        
Sbjct: 339 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 398

Query: 342 ----------------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
                                 +  + +   ++ A +VF +MTK   +    TY  +I  
Sbjct: 399 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDR 458

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           + K  + D A+  L   ++    P  +T+  +I  LC  G+ +KAL LL LM E    P+
Sbjct: 459 MFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPN 518

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y  LI  L +  K   +  L+    ++G  P
Sbjct: 519 VVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 552



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/437 (23%), Positives = 176/437 (40%), Gaps = 62/437 (14%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D  D I+++           ++  L+  +  + A+ F          PN  T+  ++  +
Sbjct: 28  DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 87

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             K      +++I+ M   G +PN + F  LV+S C       A ++L++M   GC P  
Sbjct: 88  LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 147

Query: 191 QTY--------------------------------NCLL---------KGLCYVGRVEEA 209
             Y                                NC+L         + LC VG+ ++A
Sbjct: 148 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 207

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
           ++++  +   G  PD  TY+ V+   C   +  +A  L  E    GVTP+V T+  L + 
Sbjct: 208 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 267

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           +CK G   +   L + M+   C P  ++Y+ L++  LK  ++  A  IF  MV  G   +
Sbjct: 268 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 327

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG----------------TY 373
           +    +L+ GLC     +   +  A++V+ K+       D                  TY
Sbjct: 328 DVTYGALVDGLC-----KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 382

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
           G ++  L K  K D A   L   +  G  P  I ++ +I   C  GKID A  +   M +
Sbjct: 383 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442

Query: 434 HAKIPSRTSYDMLITKL 450
              +PS  +Y  LI ++
Sbjct: 443 CGYLPSVHTYTSLIDRM 459



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 132/308 (42%), Gaps = 14/308 (4%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M ++G+  +  T     ++LCK GR  +AL++++   R   K +      ++ GL     
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEASY 57

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            +EA   L  ++ +   P+V TY  ++ GF K  +      ++N  +  G  PN   FN+
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP------AVSIFK 319
           L + YC E        LL  M    C P  + Y+  +  +    K+        A  I+ 
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM+     +++  + +  R LC     +K     A+Q+ ++M +K  V D  TY  VI  
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDK-----AFQLIKEMMRKGFVPDTSTYSKVITF 232

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           L    K ++A +       +G  P   T+  +I + C  G I++A  L   M      P+
Sbjct: 233 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT 292

Query: 440 RTSYDMLI 447
             +Y  LI
Sbjct: 293 VVTYTALI 300


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 184/393 (46%), Gaps = 7/393 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +   +D F  +     N  V  ++ L+  L      + AV    E  + G  PN  
Sbjct: 210 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPV 269

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+++I       D   A K++D MF  G  PN  T+  L++ LC  G+L +AL +L++M
Sbjct: 270 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 329

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C PN  TY  ++ GL    R E+   +LM+++  G K + Y Y++++ G  K G+S
Sbjct: 330 VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS 389

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+ L  E  E+G  PNVV +    +G C++  P +   +L+ M  +  LP+  +YS+L
Sbjct: 390 ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSL 449

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G  K G  + A+ ++KEM+      +    + LL GLC     E   L +A  V+  M
Sbjct: 450 MKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLC-----ESGRLREALTVWTHM 504

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEA--LIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
             +    D   Y  +I+ L      D+   L +     E    P  +T+N +  ALC + 
Sbjct: 505 LGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQD 564

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            + +A+ LL  M +    P   + ++ +  L +
Sbjct: 565 NLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRE 597



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 191/388 (49%), Gaps = 7/388 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++ AL  L + + AV  F E       P+ +T+S ++   C +    EA  ++D M 
Sbjct: 201 YNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 260

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PN  TF +L+++L K+G L  A +++D M   GC PN  TYN L+ GLC  G+++
Sbjct: 261 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 320

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +L  + +    P+  TY  +++G  K  R+ + + +L    ERG   N   +++L 
Sbjct: 321 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 380

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G  KEG     V L K M ++ C P+ + Y   ++GL +  K   A  I +EM+  GF 
Sbjct: 381 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 440

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +    +SL++G   K   +K +L     V+++M  +    +     +++  L +  +  
Sbjct: 441 PNAFTYSSLMKGFFKKGDSQKAIL-----VWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 495

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM--YEHAKIPSRTSYDM 445
           EAL    H +  G  P  + ++++I+ LC  G +DK L L + M   E    P   +Y++
Sbjct: 496 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNI 555

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           L   L + +    A  L  + L +G  P
Sbjct: 556 LFNALCRQDNLTRAIDLLNSMLDEGCDP 583



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 202/406 (49%), Gaps = 9/406 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCY 130
           + D +K++G   + + F  +  A    +    AV FF   A+         +F+ ++   
Sbjct: 111 VLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVI 170

Query: 131 CNKNDFFEARKVIDCMF---DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             + DF  A K    +F     G+ PN+ T+ +++ +LCK G++  A++   +M    C 
Sbjct: 171 IQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCN 230

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++ TY+ L+ GLC   RV+EA  +L  ++ +G  P+  T+  ++D   K G  + A +L
Sbjct: 231 PDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKL 290

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           ++    +G  PN VT+NTL +G C +G   K + LL+ M    C+P++++Y T++NGL+K
Sbjct: 291 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVK 350

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
             +    V I   M   G + +E + +SL+ GL  +        E+A +++++M +K   
Sbjct: 351 QRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS-----ENAVRLWKEMAEKGCK 405

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            +   YG  I  L + +K DEA   L   +  G +P   T++++++    +G   KA+L+
Sbjct: 406 PNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILV 465

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              M       +     +L+  L +  +  +A  ++   L +G+ P
Sbjct: 466 WKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKP 511



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 155/334 (46%), Gaps = 25/334 (7%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K    ++ + I  S+++ G   +   ++ L+  L    + E AV+ + E +  G  PN 
Sbjct: 349 VKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNV 408

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             +   I   C      EA  ++  M   G+ PN  T++ L+    K G  ++A+ V  +
Sbjct: 409 VVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKE 468

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M     + N+   + LL GLC  GR+ EA  +  ++  +GLKPDV  Y++++ G C VG 
Sbjct: 469 MMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGS 528

Query: 241 SNEAMELLNE--AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
            ++ ++L  E    E    P+VVT+N LFN  C++    + + LL  M    C PD ++ 
Sbjct: 529 VDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTC 588

Query: 299 STLLNGLLKWGKIRPAVS--IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +  L  L +  +I P     +F         +DE ++  L R        E+ L   A +
Sbjct: 589 NIFLETLRE--RINPPQDGRLF---------LDELVVRLLKR--------ERKL--SALR 627

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
           + E+M  +    +P T+  VI+   K K+  E +
Sbjct: 628 IVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 661



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 19/250 (7%)

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLNG 304
           ++L+     G       F  +F    K   P + V     M    +C     S++++LN 
Sbjct: 110 QVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNV 169

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           +++ G    A   +  +  FG        N L   L +K+  +   ++ A   F +M  K
Sbjct: 170 IIQEGDFSYAFKFYLHV--FGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLK 227

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY  ++  L K ++ DEA+  L      G +P  +TFN +I AL   G + +A
Sbjct: 228 NCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRA 287

Query: 425 LLLLFLMYEHAKIPSRTSYDMLIT------KLDQ----LEKSYDACAL-----YGAALKQ 469
             L+  M+    +P+  +Y+ LI       KLD+    LEK   +  +     YG  +  
Sbjct: 288 AKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTII-N 346

Query: 470 GVIPQRKPQD 479
           G++ QR+ +D
Sbjct: 347 GLVKQRRAED 356


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 194/416 (46%), Gaps = 31/416 (7%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN+LL+ L+  N  E A + F+E     +  + ++F IMI+  C      +  +V+  M 
Sbjct: 133 FNNLLILLIKSNFFEKAWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQME 191

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  PNV  +T L++  CK+G ++   ++  +MG +    N  TY  L+ G   +G  +
Sbjct: 192 EMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKK 251

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +  E+   +K  G+ P+VYTY +++   C  G+ N A EL +E  ERGV  NVVT+NTL 
Sbjct: 252 DGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLI 311

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G C+E   ++   L+  MK+    P+ ISY+TL++G    G +  A S+F +M   G  
Sbjct: 312 GGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS 371

Query: 328 VDERMMNSLLRG------------------------------LCMKSWEEKDLLEDAYQV 357
                 N L+ G                              + M +    D +E A+Q+
Sbjct: 372 PSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQI 431

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           +  M K   V D   YG++I  L       EA        EM   P  + +N +I   C 
Sbjct: 432 YSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCK 491

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           EG   +AL LL  M E+  +P+  SY+  I  L + EK  +A  L    ++ G+ P
Sbjct: 492 EGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKP 547



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 130/262 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L    ++FD +++ G   +V  +N L+  L        A +        GL+PN  +++ 
Sbjct: 285 LNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNT 344

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC+  +  +A  + + M  +G  P++ T+ IL+    ++       +++ +M   G
Sbjct: 345 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 404

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY  L+  L     +E+A+++  +++  GL  D+Y Y  ++ G C VG   EA 
Sbjct: 405 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 464

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L     E  + PN V +NT+  GYCKEG+  + + LLK M +   +P+  SY++ +  L
Sbjct: 465 KLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQIL 524

Query: 306 LKWGKIRPAVSIFKEMVRFGFE 327
            K  K   A  + K+M+  G +
Sbjct: 525 CKDEKWTEAEVLLKDMIELGLK 546



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 158/327 (48%), Gaps = 6/327 (1%)

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           + +  +V     ++N+  +S   ++AL   +QM   G  P   T+N LL  L      E+
Sbjct: 89  DSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEK 148

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A+ +    K + +K DVY++  ++ G C+VG  ++  E+L +  E G++PNVV + TL +
Sbjct: 149 AWRVFNETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLID 207

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G CK G   +G  L   M + + + ++ +Y+ L+NG  K G  +  + ++++M   G   
Sbjct: 208 GCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVP 267

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +    NS++   C         L +A+++F++M ++    +  TY  +I  L + ++  E
Sbjct: 268 NVYTYNSMICRCC-----NDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLE 322

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   +      G  P  I++N +I   C  G +DKA  L   M    + PS  +Y++LI 
Sbjct: 323 AERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIA 382

Query: 449 KLDQLEKSYDACALYGAALKQGVIPQR 475
              + + S     +      +G+ P +
Sbjct: 383 GFSEAKNSAGVTDMVREMEARGLSPSK 409



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 69/139 (49%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +++  +++   I+ S++K G    +  +  L+  L ++ + + A K F       L PN 
Sbjct: 420 VRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPND 479

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             ++ MI  YC +   + A +++  M +NG  PNV ++   +  LCK  +  EA  +L  
Sbjct: 480 VIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKD 539

Query: 181 MGRIGCKPNIQTYNCLLKG 199
           M  +G KP+I  +N + K 
Sbjct: 540 MIELGLKPSISIWNMISKA 558


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 190/386 (49%), Gaps = 6/386 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  LK+ + +FD + K G+  ++   N LL  LV   +  TAV  F +    G  P+ +T
Sbjct: 107 AGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFT 166

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
            +IM + YC       A   +  M + G   N+  +  +++  C+ G+ + A ++L  + 
Sbjct: 167 VAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQ 226

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK-NDGLKPDVYTYTAVMDGFCKVGRS 241
             G  PN+ TY  L+KG C  GR+EEA +++  +K N+ +  D   Y A+++G+C+ GR 
Sbjct: 227 VKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRM 286

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  + +E I+ GV  N+  +NT+ NGYCK G   +   LL+  + R    D+ SY+TL
Sbjct: 287 EDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTL 346

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  + G +  A      MVR GF       N+LL G C      +  ++DA +++  M
Sbjct: 347 VDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFC-----SRGAIDDALKLWFLM 401

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K+  V +  +   ++    K  KT++AL      +  G     +T N VI  LC   ++
Sbjct: 402 LKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRM 461

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI 447
            +A  L   M E +      +Y  LI
Sbjct: 462 TEAEELFHRMKEWSCPCDSLTYRTLI 487



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 171/351 (48%), Gaps = 6/351 (1%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F +++R + +     +A  V D M   G    + +   L+N L ++G +  A+ V  QM
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  T   + K  C  GRV  A + L  ++  GL  ++  Y AVMDG+C++G++
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK-RNCLPDKISYST 300
             A +LL+    +G++PNVVT+  L  GYCKEG   +   ++K +K+    + D+++Y  
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+NG  + G++  A  +  EM+  G +V+  + N+++ G C     +   + +  ++ + 
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYC-----KLGRMGEVEKLLQA 330

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
              +    D  +Y  ++    +     +A       +  G    T+T+N ++   C  G 
Sbjct: 331 NEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGA 390

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           ID AL L FLM +   +P+  S   L+    +  K+  A  L+   L +G+
Sbjct: 391 IDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGL 441



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 152/327 (46%), Gaps = 5/327 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A +   E    G+  N + ++ MI  YC      E  K++      G + +  ++  L
Sbjct: 287 EDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTL 346

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           V+  C+ G + +A E  D M R G      TYN LL G C  G +++A ++   +   G+
Sbjct: 347 VDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGV 406

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P+  + + ++DGF K G++ +A+ L  E + RG+  NVVT NT+ NG CK     +   
Sbjct: 407 VPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEE 466

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L   MK+ +C  D ++Y TL++G  K G +  A  I  EM   GF     M NS + GL 
Sbjct: 467 LFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLF 526

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
           +     K        +  +M+ K    +  TYG +I    K     +A I     +E G 
Sbjct: 527 IAKQSGK-----VNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGL 581

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLL 428
            P     + ++     EGK+D+A L+L
Sbjct: 582 KPNLFICSVLVSCFYREGKVDEANLVL 608



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 149/306 (48%), Gaps = 31/306 (10%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV  FN  +  L +  +         E S+ GL+PN+ T+  +I  +C + +  +A  + 
Sbjct: 514 SVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILY 573

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM----------------GRIG-- 185
             M + G  PN+   ++LV+   + G++ EA  VL ++                G++   
Sbjct: 574 FEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHI 633

Query: 186 ----CKPNIQT----YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
                  N Q+    +N ++ GLC +GRV +A  +  ++K  G  PD +TY++++ G   
Sbjct: 634 IESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSA 693

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G  + A  L +E +   +TPN+VT+N+L  G CK     + V L   ++ +   P+ I+
Sbjct: 694 SGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAIT 753

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+TL++G  K G    A  + ++M++ G +        L+ GLC + +     +E+A ++
Sbjct: 754 YNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGY-----MEEAIKL 808

Query: 358 FEKMTK 363
            ++M +
Sbjct: 809 LDQMIE 814



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 104/199 (52%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I   C      +AR + + +   G+ P+  T++ L++    SG +  A  + D+M 
Sbjct: 649 WNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEML 708

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
                PNI TYN L+ GLC    V  A  +   +++ G+ P+  TY  ++DG CK G + 
Sbjct: 709 SARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTT 768

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA +L  + I+ G+ P V T+  L +G C +G   + + LL  M + N  P+ I+Y TL+
Sbjct: 769 EAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLI 828

Query: 303 NGLLKWGKIRPAVSIFKEM 321
            G  + G ++    ++ EM
Sbjct: 829 QGYARCGNMKAITKLYNEM 847



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 177/426 (41%), Gaps = 32/426 (7%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D   KA   ++ ++++      G   +V   N ++  L        A + 
Sbjct: 408 PNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEEL 467

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F     +    +S T+  +I  YC   D   A ++   M + G+ P+V  F   +  L  
Sbjct: 468 FHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFI 527

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           + +  +  ++  +M   G  PN  TY  L+ G C  G + +A  +   +   GLKP+++ 
Sbjct: 528 AKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFI 587

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGV-------TPNV-------------------V 261
            + ++  F + G+ +EA  +L +  +  +       T N+                   +
Sbjct: 588 CSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKI 647

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            +N +  G CK G       L + +K +  +PD  +YS+L++G    G I  A  +  EM
Sbjct: 648 MWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEM 707

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +      +    NSL+ GLC KS      +  A  +F K+  K    +  TY  +I    
Sbjct: 708 LSARLTPNIVTYNSLIYGLC-KSCN----VSRAVSLFNKLQSKGISPNAITYNTLIDGHC 762

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K   T EA       I+ G  P   T+  +I  LC +G +++A+ LL  M E+   P+  
Sbjct: 763 KDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFI 822

Query: 442 SYDMLI 447
           +Y  LI
Sbjct: 823 TYWTLI 828



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 98/458 (21%), Positives = 176/458 (38%), Gaps = 56/458 (12%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D +   G   ++  +N ++     L       K        G+  + ++++ ++  YC
Sbjct: 292 VRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYC 351

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            K    +A +  D M  NG+     T+  L+N  C  G + +AL++   M + G  PN  
Sbjct: 352 RKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEI 411

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           + + LL G    G+ E+A  +       GL  +V T   V++G CK  R  EA EL +  
Sbjct: 412 SCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRM 471

Query: 252 IERGVTPNVVTFNTLFNGYCKEG---------TPMKGVGLLKL----------------- 285
            E     + +T+ TL +GYCK G           M+ +G +                   
Sbjct: 472 KEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQS 531

Query: 286 ---------MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                    M  +   P+ ++Y  L+ G  K G +  A  ++ EMV  G + +  + + L
Sbjct: 532 GKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVL 591

Query: 337 LR-----------GLCMKSWEEKDLLED----------AYQVFEKMTKKVSVTDPGTYGI 375
           +             L ++   + D+++D             + E +      +    + I
Sbjct: 592 VSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNI 651

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           VI  L K  +  +A          G IP   T++++I      G ID A  L   M    
Sbjct: 652 VILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSAR 711

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             P+  +Y+ LI  L +      A +L+     +G+ P
Sbjct: 712 LTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISP 749



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 75/144 (52%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           ++  +N L+  L        AV  F++  S G++PN+ T++ +I  +C   +  EA K+ 
Sbjct: 715 NIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLK 774

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G  P V T+TIL++ LC  G ++EA+++LDQM      PN  TY  L++G    
Sbjct: 775 QKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARC 834

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYT 227
           G ++   ++   +   GL P  +T
Sbjct: 835 GNMKAITKLYNEMHICGLLPANWT 858



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 6/207 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F+ +K  G       ++ L+         + A     E  S  L PN  T++ +I   
Sbjct: 667 NLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGL 726

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +   A  + + +   G  PN  T+  L++  CK G   EA ++  +M + G +P +
Sbjct: 727 CKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTV 786

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  L+ GLC  G +EEA ++L  +  + + P+  TY  ++ G+ + G      +L NE
Sbjct: 787 FTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNE 846

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPM 277
               G+ P        + G+ K+  P+
Sbjct: 847 MHICGLLP------ANWTGHVKQAEPV 867


>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
 gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
          Length = 438

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 197/403 (48%), Gaps = 22/403 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           + D +   G   S+  FN  L   V  +    AV  F+  +  G   + P+  T+SI+I 
Sbjct: 45  VLDELPLRGWGASIYSFNRTLTD-VARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIG 103

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
           C C           +  +   G+     TF  L+  LC   R  +A++ VL +M  + C 
Sbjct: 104 CCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCM 163

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---GLKPDVYTYTAVMDGFCKVGRSNEA 244
           P++ +   LLKGLC   R +EA E+L  + +D   G  PDV +YT V++GF K G S++A
Sbjct: 164 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 223

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
               +E ++R ++PNVVT++++    CK     K + +L  M K   +PD ++Y+++L+G
Sbjct: 224 YSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 283

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
               G+ + A+   K+M   G E +     SL+  LC     +     +A ++F+ MTK+
Sbjct: 284 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLC-----KNGRCTEARKIFDSMTKR 338

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGK 420
               D  TY    RTL +G  T  AL+ +H  +++    G  P    FN +I A   + K
Sbjct: 339 GLEPDIATY----RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 394

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +D+A+L+   M +H   P+   Y  +I  L +   S D   LY
Sbjct: 395 VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK-SGSVDDAMLY 436



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 142/272 (52%), Gaps = 8/272 (2%)

Query: 91  LLMALVMLNEQETAVKFF---SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           LL  L   N  + A++     ++    G  P+  +++ +I  +  + D  +A      M 
Sbjct: 172 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML 231

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D    PNV T++ ++ +LCK+  + +A+EVL+ M + G  P+  TYN +L G C  G+ +
Sbjct: 232 DRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 291

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA   L  +++DG++P+V TY ++M+  CK GR  EA ++ +   +RG+ P++ T+ TL 
Sbjct: 292 EAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLL 351

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            GY  +G  ++   LL LM +    PD   ++ L+    K  K+  A+ +F +M + G  
Sbjct: 352 QGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLN 411

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            +     +++  LC KS      ++DA   FE
Sbjct: 412 PNVVCYGTVIDVLC-KSGS----VDDAMLYFE 438



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 118/243 (48%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           +  G+   V  +  ++       + + A   + E     ++PN  T+S +I   C     
Sbjct: 196 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAM 255

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            +A +V++ M  NG  P+  T+  +++  C SG+ KEA+  L +M   G +PN+ TY  L
Sbjct: 256 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSL 315

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           +  LC  GR  EA ++  ++   GL+PD+ TY  ++ G+   G   E   LL+  +  G+
Sbjct: 316 MNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 375

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            P+   FN L   Y K+    + + +   M++    P+ + Y T+++ L K G +  A+ 
Sbjct: 376 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 435

Query: 317 IFK 319
            F+
Sbjct: 436 YFE 438



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 151/342 (44%), Gaps = 48/342 (14%)

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK---PNIQTYNC 195
           AR V+D +   G+  ++ +F   +  + +      A+ + ++M R G     P++ TY+ 
Sbjct: 42  ARHVLDELPLRGWGASIYSFNRTLTDVARDSP-AAAVSLFNRMARAGADEVTPDLCTYSI 100

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEAIER 254
           L+   C  GR++  +  L NV   G + +  T+  ++ G C   R+++AM++ L    E 
Sbjct: 101 LIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTEL 160

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM---KKRNCLPDKISYSTLLNGLLKWGKI 311
              P+V +   L  G C E    + + LL +M   +     PD +SY+T++NG  K G  
Sbjct: 161 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDS 220

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A S + EM+      D R+  +++                                  
Sbjct: 221 DKAYSTYHEML------DRRISPNVV---------------------------------- 240

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L K +  D+A+  L+  ++ G +P  +T+N+++   C  G+  +A+  L  M
Sbjct: 241 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 300

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                 P+  +Y  L+  L +  +  +A  ++ +  K+G+ P
Sbjct: 301 RSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEP 342


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 205/445 (46%), Gaps = 30/445 (6%)

Query: 50  RSLQAQRFV-DRIKASPLK--ERIDIFDSIKKDGTNWSVSDFNDLLMALV-------MLN 99
           R L+ +R + DR ++  L   + + +FD +       SV  FN LL A+          +
Sbjct: 11  RCLELERVIADRARSGSLGLGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTS 70

Query: 100 EQETAVKFFSEASS---YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
           E ET V  F+         +APN  T+SI+I C+C              +   G+  +  
Sbjct: 71  ESETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHI 130

Query: 157 TFTILVNSLCKSGRLKEALEVLDQ-MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
               L+N LC   R+ EA++VL Q M  +GC P+  +YN LLKGLC   R EEA E+L  
Sbjct: 131 VINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHM 190

Query: 216 VKNDGL---KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           + +D +    P+V +Y+ V++GF   G+ ++   L  E ++RG+ P+VVT+ T+ +G CK
Sbjct: 191 MADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCK 250

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                +   + + M      P+  +Y+ L++G L  GK +  V + +EM   G + +   
Sbjct: 251 AQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCT 310

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             SLL  LC     +     +A   F+ M  K       TYGI++     G  T  AL  
Sbjct: 311 YGSLLNYLC-----KNGRCREARFFFDSMIGKGIKPSVTTYGIMLH----GYATKGALSE 361

Query: 393 LHHAIEM----GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           +H  + +    G  P    FN    A    G IDKA+ +   M +    P   SY  LI 
Sbjct: 362 MHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALID 421

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L +L +  DA   +   + +GV P
Sbjct: 422 ALCKLGRVDDAEVKFNQMINEGVTP 446



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 190/406 (46%), Gaps = 5/406 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE + + + +   G   +   +  LL  L        A  FF      G+ P+  T+ IM
Sbjct: 290 KEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIM 349

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  Y  K    E   +++ M  NG  PN   F I  ++  K G + +A+++ ++M + G 
Sbjct: 350 LHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGL 409

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P+  +Y  L+  LC +GRV++A      + N+G+ PD+  +++++ G C V +  +  E
Sbjct: 410 SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEE 469

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L  E +  G+ PN+V FNT+    CKEG  M+G  L+  ++     PD ISY+TL++G  
Sbjct: 470 LFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHC 529

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             G I  A  + + MV  G + D    N+LL G C     +   ++ AY  F KM     
Sbjct: 530 LAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYC-----KAGRIDSAYSHFRKMLSNGI 584

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                TY  ++  L + K+  EA     + I  G      T+N ++  LC    +D+A+ 
Sbjct: 585 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIK 644

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           +   +       +  +++++I  L +  +  DA  L+ A    G++
Sbjct: 645 MFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLV 690



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 184/401 (45%), Gaps = 13/401 (3%)

Query: 79  DGTNWS----VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           D   WS    V  ++ ++       + +     F E    G+ P+  T++ +I   C   
Sbjct: 193 DDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQ 252

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
            F  A  V   M DNG  PN+ T+  L++     G+ KE + +L++M   G KPN  TY 
Sbjct: 253 LFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYG 312

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            LL  LC  GR  EA     ++   G+KP V TY  ++ G+   G  +E  +LLN  +  
Sbjct: 313 SLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVAN 372

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           G++PN   FN  F+ Y K G   K + +   M+++   PD +SY  L++ L K G++  A
Sbjct: 373 GISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDA 432

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
              F +M+  G   D  + +SL+ GLC +  WE+ +      ++F +M       +   +
Sbjct: 433 EVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVE------ELFFEMLNVGIHPNIVFF 486

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIE-MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
             ++  L K  +  E    L  +IE MG  P  I++N +I   C  G ID+A  LL  M 
Sbjct: 487 NTILCNLCKEGRVMEGQ-RLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMV 545

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                P   SY+ L+    +  +   A + +   L  G+ P
Sbjct: 546 SVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITP 586



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 188/385 (48%), Gaps = 5/385 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  D+ + +  +G + +   FN    A       + A+  F++    GL+P++ ++  
Sbjct: 359 LSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGA 418

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A    + M + G  P++  F+ LV  LC   + ++  E+  +M  +G
Sbjct: 419 LIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVG 478

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PNI  +N +L  LC  GRV E   ++ +++  G++PDV +Y  ++DG C  G  +EA 
Sbjct: 479 IHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEAS 538

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +LL   +  G+ P+  ++NTL +GYCK G         + M      P  ++Y+T+L+GL
Sbjct: 539 KLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGL 598

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            +  +   A  ++  M+  G + D    N +L GLC     + + +++A ++F+ +  K 
Sbjct: 599 FQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLC-----KSNCVDEAIKMFQNLCSKG 653

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  T+ I+I  L KG + ++A+         G +   +T+  V++ L  EG +++  
Sbjct: 654 LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFD 713

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL 450
            L   M ++   P+    + L+ +L
Sbjct: 714 SLFSAMEKNGTAPNSQMLNALVRRL 738



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 197/407 (48%), Gaps = 7/407 (1%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           F    K   + + +DIF+ +++ G +     +  L+ AL  L   + A   F++  + G+
Sbjct: 385 FSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGV 444

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P+   FS ++   C  + + +  ++   M + G HPN+  F  ++ +LCK GR+ E   
Sbjct: 445 TPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQR 504

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           ++D +  +G +P++ +YN L+ G C  G ++EA ++L  + + GLKPD ++Y  ++ G+C
Sbjct: 505 LVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYC 564

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K GR + A     + +  G+TP VVT+NT+ +G  +     +   L   M       D  
Sbjct: 565 KAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIY 624

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y+ +LNGL K   +  A+ +F+ +   G +++    N ++ G  +K   +    EDA  
Sbjct: 625 TYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMI-GALLKGGRK----EDAMD 679

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-GHIPRTITFNNVIQAL 415
           +F  +     V +  TY +V+  L +    +E    L  A+E  G  P +   N +++ L
Sbjct: 680 LFAAIPANGLVQNVVTYRLVVENLIEEGSLEE-FDSLFSAMEKNGTAPNSQMLNALVRRL 738

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
              G I +A   L  + E       ++  MLI+     E  + A +L
Sbjct: 739 LHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSL 785



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/434 (22%), Positives = 187/434 (43%), Gaps = 69/434 (15%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           F+ +  +G    +  F+ L+  L  +++ E   + F E  + G+ PN   F+ ++   C 
Sbjct: 436 FNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK 495

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           +    E ++++D +   G  P+V ++  L++  C +G + EA ++L+ M  +G KP+  +
Sbjct: 496 EGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFS 555

Query: 193 YNCLLKGLCYVGRVEEAY-----------------------------------EMLMNVK 217
           YN LL G C  GR++ AY                                   E+ +N+ 
Sbjct: 556 YNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMI 615

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           N G K D+YTY  +++G CK    +EA+++      +G+  N++TFN +     K G   
Sbjct: 616 NSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKE 675

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
             + L   +     + + ++Y  ++  L++ G +    S+F  M + G   + +M+N+L+
Sbjct: 676 DAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 735

Query: 338 R-----------GLCMKSWEEKDLL--------------EDAYQVFEK-MTKKVSVTDPG 371
           R           G  +   +E++                 D YQ   K + KK  + +  
Sbjct: 736 RRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEA 795

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
               +I+   K ++ D+A       +  G  P  +T+N ++  L   G+  +A  L   M
Sbjct: 796 NSSALIK---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSM 852

Query: 432 YEHAKIPSRTSYDM 445
                I SRT  ++
Sbjct: 853 -----INSRTQMNI 861



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 179/442 (40%), Gaps = 68/442 (15%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + DSI+  G    V  +N L+    +    + A K      S GL P+S++++ ++  YC
Sbjct: 505 LVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYC 564

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A      M  NG  P V T+  +++ L ++ R  EA E+   M   G K +I 
Sbjct: 565 KAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIY 624

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN +L GLC    V+EA +M  N+ + GL+ ++ T+  ++    K GR  +AM+L    
Sbjct: 625 TYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 684

Query: 252 IERGVTPNVVT----------------FNTLFNGYCKEGTPMKGVGLLKLMKK------- 288
              G+  NVVT                F++LF+   K GT      L  L+++       
Sbjct: 685 PANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 744

Query: 289 ------------RNCLPDKISYSTLLN---------------------------GLLKWG 309
                       RN   +  + S L++                            L+K  
Sbjct: 745 SRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKA 804

Query: 310 K-IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           + I  A S+F+EM+  G   D    N++L GL      +     +A +++  M    +  
Sbjct: 805 RRIDDAYSLFREMLMKGLTPDVVTYNTILHGLF-----QTGRFSEAKELYLSMINSRTQM 859

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +  TY I++  L K    DEA          G     ITFN +I AL   G+ + A+ L 
Sbjct: 860 NIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF 919

Query: 429 FLMYEHAKIPSRTSYDMLITKL 450
             +  +  +P   +Y ++   L
Sbjct: 920 AAIPANGLVPDVVTYRLVAENL 941



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 137/311 (44%), Gaps = 28/311 (9%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K    ++ +D+F +I  +G   +V  +  ++  L+     E     FS     G APNS
Sbjct: 669 LKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNS 728

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC-------------- 166
              + ++R   ++ D   A   +  + +  +    +T ++L++                 
Sbjct: 729 QMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKK 788

Query: 167 --------------KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
                         K+ R+ +A  +  +M   G  P++ TYN +L GL   GR  EA E+
Sbjct: 789 YRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 848

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
            +++ N   + ++YTY  +++G CK    +EA ++      +G+  N++TFN +     K
Sbjct: 849 YLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLK 908

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     + L   +     +PD ++Y  +   L++ G +     +F  M + G  +D R+
Sbjct: 909 GGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRL 968

Query: 333 MNSLLRGLCMK 343
           +N+L+R L  +
Sbjct: 969 LNALVRRLLQR 979



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 137/305 (44%), Gaps = 28/305 (9%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            I+   L+E   +F +++K+GT  +    N L+  L+   +   A  + S+      +  +
Sbjct: 704  IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEA 763

Query: 121  WTFSIMIRCY---------------------CNKNDFFE-ARKVIDC------MFDNGYH 152
             T S++I  +                      N +   + AR++ D       M   G  
Sbjct: 764  STTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLT 823

Query: 153  PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
            P+V T+  +++ L ++GR  EA E+   M     + NI TYN +L GLC    V+EA++M
Sbjct: 824  PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKM 883

Query: 213  LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              ++ + GL+ ++ T+  ++    K GR  +AM+L       G+ P+VVT+  +     +
Sbjct: 884  FQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIE 943

Query: 273  EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            EG+  +  GL   M+K     D    + L+  LL+ G I  A +   ++    F ++   
Sbjct: 944  EGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEAST 1003

Query: 333  MNSLL 337
             + L+
Sbjct: 1004 TSELI 1008



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/211 (20%), Positives = 91/211 (43%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            KA  + +   +F  +   G    V  +N +L  L        A + +    +     N +
Sbjct: 803  KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 862

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T++I++   C  N   EA K+   +   G   N+ TF I++ +L K GR ++A+++   +
Sbjct: 863  TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 922

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               G  P++ TY  + + L   G +EE   + + ++  G   D     A++    + G  
Sbjct: 923  PANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDI 982

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
            + A   L++  E+  +    T + L + + +
Sbjct: 983  SRAGAYLSKLDEKNFSLEASTTSELISLFSR 1013



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 6/192 (3%)

Query: 66   LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
              E  +++ S+    T  ++  +N +L  L   N  + A K F    S GL  N  TF+I
Sbjct: 842  FSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNI 901

Query: 126  MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            MI          +A  +   +  NG  P+V T+ ++  +L + G L+E   +   M + G
Sbjct: 902  MIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSG 961

Query: 186  CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA- 244
               + +  N L++ L   G +  A   L  +       +  T + ++  F +    + A 
Sbjct: 962  TPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAK 1021

Query: 245  -----MELLNEA 251
                   LLNEA
Sbjct: 1022 SLPEKYRLLNEA 1033


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 164/313 (52%), Gaps = 5/313 (1%)

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           S  G+ PN+ T +IM++ +  +    EA   +  M ++G  P+  T+  ++N  CK+G+L
Sbjct: 200 SRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKL 259

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
            EA  ++D+M R G KP+I T N +L  LC   + EEAYE+ +  +  G   D  TY  +
Sbjct: 260 GEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTL 319

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           + G+ K  + ++A++L  E  +RG+ P+VV++N L  G C  G   + V  L  + ++  
Sbjct: 320 IMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGL 379

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
           +PD++S + +++G    G +  A     +MV   F+ D    N LLRGLC       D+L
Sbjct: 380 VPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLC-----RVDML 434

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           E A+++F     K +  D  TY  +I  L K  + DEA   +         P   T+N +
Sbjct: 435 EKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAI 494

Query: 412 IQALCGEGKIDKA 424
           ++AL   G+ ++A
Sbjct: 495 VRALTHAGRTEEA 507



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 184/407 (45%), Gaps = 44/407 (10%)

Query: 92  LMALVMLNEQETAVKFFSE---ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           L A V  N+   A + F           + + WT++ +++  C++    EA +V D M  
Sbjct: 106 LAAYVHANQPHLAFQLFQNELIXXXXXXSIDVWTYNTLVKGLCDEGKIDEAIRVRDEMES 165

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVE 207
               P+V T+  L++   K     E   +L++M  R G +PN  T+N ++K     G++ 
Sbjct: 166 LKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKIN 225

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA + ++ +   G+ PD +TY  +++GFCK G+  EA  +++E   +G+ P++ T NT+ 
Sbjct: 226 EASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTML 285

Query: 268 NGYCKEGTPM-----------------------------------KGVGLLKLMKKRNCL 292
           +  C E  P                                    K + L + MKKR  +
Sbjct: 286 HTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIV 345

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P  +SY+ L+ GL   GK   AV    E++  G   DE   N ++ G C   WE   +++
Sbjct: 346 PSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYC---WE--GMVD 400

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A+Q   KM       D  T  I++R L +    ++A    +  I   +    +T+N +I
Sbjct: 401 KAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMI 460

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
             LC EG++D+A  L+  M      P + +Y+ ++  L    ++ +A
Sbjct: 461 SYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEA 507



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 133/286 (46%), Gaps = 41/286 (14%)

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           ++ TYN L+KGLC  G+++EA  +   +++  L PDV TY  ++DG  K   S E   LL
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 249 NEAIERG-VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            E   RG V PN VT N +   + KEG   +    +  M +    PD  +Y+T++NG  K
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK+  A  +  EM R G + D   +N++L  LCM   E+K   E+AY++  K  K+  +
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCM---EKKP--EEAYELTVKARKRGYI 310

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  TYG +I    KGK+                                    DKAL L
Sbjct: 311 LDEVTYGTLIMGYFKGKQE-----------------------------------DKALKL 335

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              M +   +PS  SY+ LI  L    K+  A       L++G++P
Sbjct: 336 WEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVP 381



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 129/267 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E   + D + + G    +   N +L  L M  + E A +   +A   G   +  
Sbjct: 255 KAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEV 314

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I  Y       +A K+ + M   G  P+V ++  L+  LC SG+  +A++ L+++
Sbjct: 315 TYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNEL 374

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  + N ++ G C+ G V++A++    +  +  KPD++T   ++ G C+V   
Sbjct: 375 LEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDML 434

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A +L N  I +  + +VVT+NT+ +  CKEG   +   L+  M+ +   PD+ +Y+ +
Sbjct: 435 EKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAI 494

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           +  L   G+   A     ++   G  V
Sbjct: 495 VRALTHAGRTEEAEKFMSKLSETGQAV 521



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 161/367 (43%), Gaps = 68/367 (18%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           +NE   AV    E+   G++P+ +T++ MI  +C      EA +++D M   G  P++ T
Sbjct: 224 INEASDAVVKMVES---GVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICT 280

Query: 158 FTILVNSLCKSGRLKEALE----------VLDQ-------------------------MG 182
              ++++LC   + +EA E          +LD+                         M 
Sbjct: 281 LNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMK 340

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           + G  P++ +YN L++GLC  G+ ++A + L  +   GL PD  +   ++ G+C  G  +
Sbjct: 341 KRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVD 400

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTL 301
           +A +  N+ +     P++ T N L  G C+     K   L    + K+N + D ++Y+T+
Sbjct: 401 KAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSV-DVVTYNTM 459

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K G++  A  +  +M    FE D+   N+++R L      E+          EK 
Sbjct: 460 ISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEA---------EKF 510

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K+S T     G  ++T    ++ D +                I ++  I  LC +GK 
Sbjct: 511 MSKLSET-----GQAVKTHDTSQELDAS--------------SDIMYSQQISDLCTQGKY 551

Query: 422 DKALLLL 428
            +A+ L 
Sbjct: 552 KEAMKLF 558



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 47/250 (18%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +++ +KK G   SV  +N L+  L +  + + AV   +E    GL P+  + +I+I  
Sbjct: 333 LKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHG 392

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC +    +A +  + M  N + P++ T  IL+  LC+   L++A ++ +         +
Sbjct: 393 YCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVD 452

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV------------------ 231
           + TYN ++  LC  GR++EA++++ +++    +PD YTY A+                  
Sbjct: 453 VVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMS 512

Query: 232 -----------------------------MDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
                                        +   C  G+  EAM+L  E+ ++GV+ N  T
Sbjct: 513 KLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYT 572

Query: 263 FNTLFNGYCK 272
           +  L +G+ K
Sbjct: 573 YIKLMDGFLK 582


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 189/392 (48%), Gaps = 10/392 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F S+   G   +    N L+ A       + A+  F+E    G+ PN  T+S +I  +
Sbjct: 393 NLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAF 452

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC-KPN 189
           C      +A +    M   G  PN   +  L++  C  G L +A E + +M   G  +PN
Sbjct: 453 CRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPN 512

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           I  ++ ++  LC  GRV +A ++   V + G +P + T+ +++DG+C VG+  +A  +L+
Sbjct: 513 IVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 572

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             +  G+ P+VVT NTL +GYCK G    G+ L + M  +   P  ++Y+ +L+GLL+ G
Sbjct: 573 AMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAG 632

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           +   A  +F EM+  G  VD      LL+GLC       DL ++A  +F K+       D
Sbjct: 633 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC-----RNDLTDEAITLFHKLGAMDCKFD 687

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
                 +I  L K ++ +EA          G +P   T+  +I+ L  EG +++A  +  
Sbjct: 688 ITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFS 747

Query: 430 LMYEHAKIPSRTSYD----MLITKLDQLEKSY 457
            M +    PS    +    ML+ K D ++  Y
Sbjct: 748 SMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGY 779



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 188/411 (45%), Gaps = 6/411 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K+  +IF  +   G    +  ++ LL               F   +  G+  N    +I+
Sbjct: 354 KDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINIL 413

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I  +  +    EA  V   M   G  PNV T++ L+++ C+ GRL +A+E   QM  IG 
Sbjct: 414 ISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGI 473

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL-KPDVYTYTAVMDGFCKVGRSNEAM 245
           +PN   Y+ L+ G C  G + +A E +  + + GL +P++  +++++   C  GR  +A 
Sbjct: 474 EPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQ 533

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ N  I  G  P +VTFN+L +GYC  G   K  G+L  M      PD ++ +TL++G 
Sbjct: 534 DVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGY 593

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GKI   + +F+EM+    +      N +L GL             A ++F +M    
Sbjct: 594 CKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSA-----AKKMFHEMIDSG 648

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           +  D  TY I+++ L +   TDEA+   H    M         N +I AL    + ++A 
Sbjct: 649 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEAN 708

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            L   +     +P+ ++Y ++I  L +     +A  ++ +  K G  P  +
Sbjct: 709 DLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSR 759



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 190/409 (46%), Gaps = 6/409 (1%)

Query: 67  KERIDIFDSIKKDGTNWS--VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           +E +D+   + K+G   S  V  FN ++       E   A   F+E    G+ P+  T++
Sbjct: 212 QEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYN 271

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            ++   C      +A  V+  M D G  P+  T+  +++    SG  KE+ ++  +M   
Sbjct: 272 SIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSK 331

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  P+  T++  +  LC  GR ++A E+   +   G  PD+ +Y+ ++ G+   GR  + 
Sbjct: 332 GLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADM 391

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L +   ++G+  N    N L + + K G   + + +   M+ +   P+ ++YSTL++ 
Sbjct: 392 NNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISA 451

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             + G++  A+  F +M+  G E +  + +SL+ G CM      DL++    + E M+K 
Sbjct: 452 FCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHG----DLVKAKEFISEMMSKG 507

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +   +   +  +I +L    +  +A    +  I +G  P  +TFN++I   C  GK++KA
Sbjct: 508 LHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKA 567

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +L  M      P   + + L++   +  K  D   L+   L + V P
Sbjct: 568 FGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKP 616



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 184/417 (44%), Gaps = 20/417 (4%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVML-------NEQETAVKFFS----EASSYGLAP-N 119
           +FD + + GT       ND L AL          N     +  F+    E +   +AP  
Sbjct: 64  LFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGPRVAPLT 123

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL- 178
             T+ I++ C C           +  +   G        T  +  LC + R  EA++VL 
Sbjct: 124 VRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLL 183

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDGFC 236
            +M  + C P+  +YN ++K LC   R +EA +M+  +  +G    PDV ++  V+ GF 
Sbjct: 184 HRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 243

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G  ++A  L NE +++GV P+V T+N++ +  CK     K   +L+ M  +   PD +
Sbjct: 244 KQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGV 303

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y+ +++G    G  + +  +F++M   G   D    +S +  LC          +DA +
Sbjct: 304 TYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRS-----KDAEE 358

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +F+ MT K  + D  +Y I++       +  +     H   + G +      N +I A  
Sbjct: 359 IFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHA 418

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             G +D+A+L+   M      P+  +Y  LI+   ++ +  DA   +   +  G+ P
Sbjct: 419 KRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEP 475



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/438 (23%), Positives = 191/438 (43%), Gaps = 41/438 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  ++F+ + + G    V  +N ++ AL      + A     +    G+ P+  
Sbjct: 244 KQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGV 303

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  Y     + E+ K+   M   G  P+  TF+  ++SLCK GR K+A E+   M
Sbjct: 304 TYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYM 363

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGR-----------------------------------V 206
              G  P+I +Y+ LL G    GR                                   +
Sbjct: 364 TTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMM 423

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA  +   ++  G++P+V TY+ ++  FC++GR  +AME  ++ I  G+ PN   +++L
Sbjct: 424 DEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSL 483

Query: 267 FNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
            +G+C  G  +K    + ++M K    P+ + +S++++ L   G++  A  +F  ++  G
Sbjct: 484 IHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIG 543

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   NSL+ G C+    EK     A+ V + M       D  T   ++    K  K
Sbjct: 544 DRPTIVTFNSLIDGYCLVGKMEK-----AFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGK 598

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+ LI     +     P T+T+N V+  L   G+   A  +   M +        +Y +
Sbjct: 599 IDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKI 658

Query: 446 LITKLDQLEKSYDACALY 463
           L+  L + + + +A  L+
Sbjct: 659 LLKGLCRNDLTDEAITLF 676



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 37/197 (18%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF-------FEAR 140
           +N +L  L+       A K F E    G A +  T+ I+++  C +ND        F   
Sbjct: 621 YNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC-RNDLTDEAITLFHKL 679

Query: 141 KVIDCMFD-----------------------------NGYHPNVTTFTILVNSLCKSGRL 171
             +DC FD                             +G  PNV+T+ +++ +L K G +
Sbjct: 680 GAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSV 739

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
           +EA  +   M + GC P+ +  N +++ L   G + +A   +  V    +  +  T + +
Sbjct: 740 EEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLL 799

Query: 232 MDGFCKVGRSNEAMELL 248
           M  F   G+  E ++ L
Sbjct: 800 MSLFSSKGKHREQIKFL 816


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 216/452 (47%), Gaps = 12/452 (2%)

Query: 26  FNKLV--VFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLK---ERIDIFDSIKKDG 80
           F+K +  + A A +    +L   +  +S+ +   + ++K   ++   + +  F+S+    
Sbjct: 6   FHKFLHWLHAEAEIGENRALISPQQTQSILSNLILTKVKPPSIQNVDDAVSQFNSMLCMR 65

Query: 81  TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEAR 140
               V  FN +L +   +    TAV         G+ P+ +T +I++ C+C+        
Sbjct: 66  HTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGF 125

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
            V+  +   GY P+  TFT L+  LC  G++ +AL   D++   G K +  +Y  L+ G+
Sbjct: 126 SVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGV 185

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C +G    A +++  +     KP+V  Y  ++D  CK    +EA  L +E   +G++ NV
Sbjct: 186 CKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANV 245

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           V++N +  G+CK     + + L K M ++N +P  ++Y +L++GL K G+I     +  E
Sbjct: 246 VSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDE 305

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M   G   D    NSL+ GLC         L+ A  +F KM  K    D  T+ I++  L
Sbjct: 306 MHDRGIPADVITYNSLIDGLCKNGH-----LDRAIALFNKM--KDXRFDRLTFTILLDGL 358

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            KG +  +A       +   +      +N +I   C +G +++AL +   M ++  IPS 
Sbjct: 359 CKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSA 418

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            +++++I  L + +++  A  L    + +G++
Sbjct: 419 VTFEIIINALFEKDENDKAEKLLHEMIARGLL 450



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/251 (19%), Positives = 101/251 (40%), Gaps = 40/251 (15%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P V  +  ++D F  +   + A+ L +    +G+ P+  T N L N +C  G    G  +
Sbjct: 68  PPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFSV 127

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L  + KR   P  I+++TL+ GL   G++  A+    +++  G + D+    +L+ G+C 
Sbjct: 128 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVC- 186

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
           K  + +  ++   ++  ++TK                                       
Sbjct: 187 KIGDTRGAIKLVRKIDGRLTK--------------------------------------- 207

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P    +N +I ALC    + +A  L   M       +  SY+++I    + +   +A  L
Sbjct: 208 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNL 267

Query: 463 YGAALKQGVIP 473
           +    ++ ++P
Sbjct: 268 FKEMHQKNMVP 278


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 183/390 (46%), Gaps = 6/390 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNS 120
           K   + E +D+F  + +     SV DF  LL A+V L    TA+       SS G+  ++
Sbjct: 53  KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADT 112

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T +I+I C C          V+  MF  G  P V T T L+N LC  G + +A+ + D 
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADH 172

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M ++    ++ TY  L+ GLC  G    A   L  ++    KP+V  Y+ +MDG CK G 
Sbjct: 173 MEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGL 232

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+ L +E   +GV PN+VT+  L  G C  G   +   LL  M K    PD    + 
Sbjct: 233 VSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNI 292

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++   K GK+  A S+   M+  G   D    NSL+   C+     ++ + +A +VF  
Sbjct: 293 LVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCL-----QNKMNEAMRVFHL 347

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +  + D   +  +I    K K  ++A+  L    +MG +P   T+  +I   C  G+
Sbjct: 348 MVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGR 407

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              A  L   M+++ ++P+  +  +++  L
Sbjct: 408 PLAAKELFLNMHKYGQVPNLQTCAVILDGL 437



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 200/424 (47%), Gaps = 8/424 (1%)

Query: 28  KLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASP-LKERIDIFDSIKKDGTNWSVS 86
           KLV F  + L T   L L+  P  +     ++ +     + + + + D ++K      V 
Sbjct: 126 KLVAFGFSVLGTMFKLGLE--PTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVY 183

Query: 87  DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
            +  L+  L    +   AV +  +       PN   +S ++   C      EA  +   M
Sbjct: 184 TYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEM 243

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
              G  PN+ T+  L+  LC  GR KEA  +LD+M ++G +P++Q  N L+   C  G+V
Sbjct: 244 NGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKV 303

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            +A  ++  +   G  PDV+TY +++  +C   + NEAM + +  + RG  P++V F +L
Sbjct: 304 MQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSL 363

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G+CK+    K + LL+ M K   +PD  +++TL+ G  + G+   A  +F  M ++G 
Sbjct: 364 IHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQ 423

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             + +    +L GLC     +++LL +A  + + M K     +   Y I++  +    K 
Sbjct: 424 VPNLQTCAVILDGLC-----KENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKL 478

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           + A          G       +  +I+ LC +G +DKA  LL  M E+  +P+  +Y++ 
Sbjct: 479 NAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVF 538

Query: 447 ITKL 450
           +  L
Sbjct: 539 VQGL 542



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 176/377 (46%), Gaps = 6/377 (1%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVT 156
           L   + A+  F   +     P+   F++++        +  A  ++  MF + G   +  
Sbjct: 54  LKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTI 113

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           T  I++N LC+   +     VL  M ++G +P + T   L+ GLC  G V +A  +  ++
Sbjct: 114 TLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHM 173

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           +      DVYTY  +++G CK G +  A+  L +  ER   PNVV ++T+ +G CK+G  
Sbjct: 174 EKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLV 233

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            + + L   M  +   P+ ++Y+ L+ GL  +G+ + A S+  EM++ G   D +M+N L
Sbjct: 234 SEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNIL 293

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           +   C    +E  +++ A  V   M       D  TY  +I       K +EA+   H  
Sbjct: 294 VDAFC----KEGKVMQ-AKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLM 348

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           +  G +P  + F ++I   C +  I+KA+ LL  M +   +P   ++  LI    Q  + 
Sbjct: 349 VSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRP 408

Query: 457 YDACALYGAALKQGVIP 473
             A  L+    K G +P
Sbjct: 409 LAAKELFLNMHKYGQVP 425



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 122/245 (49%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N L+    + N+   A++ F    S G  P+   F+ +I  +C   +  +A  +++
Sbjct: 322 VFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLE 381

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G+ P+V T+T L+   C++GR   A E+   M + G  PN+QT   +L GLC   
Sbjct: 382 EMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKEN 441

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            + EA  +   ++   L  ++  Y+ ++DG C  G+ N A EL +    +G+  NV  + 
Sbjct: 442 LLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYT 501

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            +  G CK+G+  K   LL  M++  CLP+  +Y+  + GLL   +I  ++     M   
Sbjct: 502 IMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDK 561

Query: 325 GFEVD 329
           GF VD
Sbjct: 562 GFSVD 566



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 109/240 (45%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +F  +   G    +  F  L+           A+    E S  G  P+  T++ 
Sbjct: 338 MNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTT 397

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C       A+++   M   G  PN+ T  ++++ LCK   L EA+ +   M +  
Sbjct: 398 LIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSN 457

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              NI  Y+ LL G+C  G++  A+E+  ++   GL+ +VY YT ++ G CK G  ++A 
Sbjct: 458 LDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAE 517

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +LL    E G  PN  T+N    G   +    + +  L +M+ +    D  +   ++N L
Sbjct: 518 DLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYL 577



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 95/207 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + + + + K G    V+ +  L+           A + F     YG  PN  
Sbjct: 369 KDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQ 428

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T ++++   C +N   EA  +   M  +    N+  ++IL++ +C +G+L  A E+   +
Sbjct: 429 TCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSL 488

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + N+  Y  ++KGLC  G +++A ++L+N++ +G  P+  TY   + G       
Sbjct: 489 PGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEI 548

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFN 268
             +++ L    ++G + +  T   + N
Sbjct: 549 ARSIKYLTIMRDKGFSVDAATTEFIIN 575


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 182/386 (47%), Gaps = 6/386 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   +   +KKDG   +   +N L+ A   L   + A K     ++ G  P+ WT+++
Sbjct: 255 LGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNV 314

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           +    C      EA ++ D M   G   P+V T+  L ++  K     +AL +L++M   
Sbjct: 315 LAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREK 374

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G K  + T+N ++KGLC  G +E A   L  + +DGL PDV TY  ++   CK G   +A
Sbjct: 375 GVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKA 434

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L++E + RG+  +  T NT+    CKE    +  GLL+   +R  +PD++SY T++  
Sbjct: 435 YTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAA 494

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             K     PA+ ++ EM+           N+L++GL          L++A     ++ +K
Sbjct: 495 YFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGL-----SRMGRLKEAIDKLNELMEK 549

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             V D  TY I+I    K    + A    +  +E    P  +T N ++  LC  GK+DKA
Sbjct: 550 GLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKA 609

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKL 450
           L L     E  K     +Y+ LI  +
Sbjct: 610 LKLFESWVEKGKKVDVITYNTLIQTM 635



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 187/415 (45%), Gaps = 66/415 (15%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + ++  F    +  L PN +TF++++  +C+K    +A   +  M   G  P+  T+  L
Sbjct: 186 QASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTL 245

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +N+ C+ G L EA  +L +M + G  P   TYN L+     +G +++A +++  +  +G 
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305

Query: 222 KPDVYTYTAVMDGFCKVGR------------------------------------SNEAM 245
           +PD++TY  +  G C+ G+                                    S++A+
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL E  E+GV   +VT N +  G CK+G     +G L  M      PD I+Y+TL++  
Sbjct: 366 RLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAH 425

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEEKDLL------------- 351
            K G I  A ++  EMVR G ++D   +N++L  LC  K +EE   L             
Sbjct: 426 CKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDE 485

Query: 352 ----------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
                           E A +++++M +K       TY  +I+ L +  +  EA+  L+ 
Sbjct: 486 VSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNE 545

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            +E G +P   T+N +I A C EG ++ A      M E++  P   + + L+  L
Sbjct: 546 LMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGL 600



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 189/400 (47%), Gaps = 7/400 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +A  + E   + D +++ GT    V  +N L  A         A++   E    G+    
Sbjct: 321 QAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATL 380

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T +I+I+  C   +   A   ++ M D+G  P+V T+  L+++ CK+G + +A  ++D+
Sbjct: 381 VTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDE 440

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G K +  T N +L  LC   R EEA  +L +    G  PD  +Y  VM  + K   
Sbjct: 441 MVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYN 500

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           S  A+ L +E IE+ +TP++ T+NTL  G  + G   + +  L  + ++  +PD  +Y+ 
Sbjct: 501 SEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNI 560

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++   K G +  A     +MV   F+ D    N+L+ GLC+        L+ A ++FE 
Sbjct: 561 IIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGK-----LDKALKLFES 615

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
             +K    D  TY  +I+T+ K    D AL         G  P   T+N V+ AL   G+
Sbjct: 616 WVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGR 675

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDML-ITKLDQLEKSYDA 459
            ++A  +L  + E   +    S  +L  + +D+ E   DA
Sbjct: 676 TEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDA 715



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 133/271 (49%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + ++D + +     S+S +N L+  L  +   + A+   +E    GL P+  T++I+I  
Sbjct: 505 LRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHA 564

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC + D   A +  + M +N + P+V T   L+N LC +G+L +AL++ +     G K +
Sbjct: 565 YCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVD 624

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TYN L++ +C  G V+ A     +++  GL+PD +TY  V+    + GR+ EA  +L+
Sbjct: 625 VITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLH 684

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +  E G      +   L      E    K     +   +        +Y+ L+NGL   G
Sbjct: 685 KLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSG 744

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           + + A +I  EM++ G  VD     +L+ GL
Sbjct: 745 QFKEAKAILDEMMQKGMSVDSSTYITLMEGL 775


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 189/391 (48%), Gaps = 5/391 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           + +F ++L  L  +    TA+    +    G+ PN  T +I+I C+C+      +  V+ 
Sbjct: 52  IVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLG 111

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY PN  T T L+  LC  G +++++   D++   G + N  +Y  LL GLC +G
Sbjct: 112 KILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIG 171

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A + L  +++     +V  Y  ++DG CK    NEA +  +E   RG+ PNV+T+ 
Sbjct: 172 ETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYT 231

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL  G+C  G       LL  M  +N  P+  +Y+ L++ L K GK++ A ++  EM   
Sbjct: 232 TLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYR 291

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D     SLL G C     +   L+ A  +F KM +     +  TY  +I  L KG 
Sbjct: 292 GQPADVVTYTSLLDGFC-----KNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGG 346

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           +  +A       +  G      T+N +I  LC EG +D+AL +   M ++  IP+  +++
Sbjct: 347 RLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFE 406

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           ++I  L + +++  A  L    + +G++  R
Sbjct: 407 IIIRSLFKKDENDKAEKLLHEMIAKGLLRFR 437



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 162/329 (49%), Gaps = 5/329 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +   I K G   +      L+  L +  E + +V F  +  + G   N  ++  ++   C
Sbjct: 109 VLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLC 168

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +   A K +  + D+    NV  +  +++ LCK   + EA +   +M   G  PN+ 
Sbjct: 169 KIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVI 228

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+ G C  G++  A+ +L  +    + P+VYTY  ++D  CK G+  EA  LL E 
Sbjct: 229 TYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEM 288

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             RG   +VVT+ +L +G+CK     K   L   MK+    P+K +Y+ L++GL K G++
Sbjct: 289 HYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRL 348

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           + A  +F++++  G  +D    N ++ GLC     ++ +L++A  +  KM     + +  
Sbjct: 349 KDAQKLFQDLLVKGCCIDVCTYNVMIGGLC-----KEGMLDEALAIKSKMEDNGCIPNVV 403

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           T+ I+IR+L K  + D+A   LH  I  G
Sbjct: 404 TFEIIIRSLFKKDENDKAEKLLHEMIAKG 432



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 143/301 (47%), Gaps = 9/301 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS--EASSYGLAPNSWTF 123
           +++ +   D +   G   +   +  LL  L  + E   A+KF    E SS GL  N   +
Sbjct: 138 VQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGL--NVVMY 195

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +I   C      EA      M   G  PNV T+T L+   C +G+L  A  +L++M  
Sbjct: 196 NTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMIL 255

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               PN+ TY  L+  LC  G+V+EA  +L  +   G   DV TYT+++DGFCK    ++
Sbjct: 256 KNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDK 315

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A  L  +  E G+ PN  T+  L +G CK G       L + +  + C  D  +Y+ ++ 
Sbjct: 316 ATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIG 375

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL K G +  A++I  +M     E +  + N +   + ++S  +KD  + A ++  +M  
Sbjct: 376 GLCKEGMLDEALAIKSKM-----EDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIA 430

Query: 364 K 364
           K
Sbjct: 431 K 431



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 11/323 (3%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + P +  F  ++  L K      A+ +  QM   G +PN+ T N L+   C++G++  ++
Sbjct: 48  HTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSF 107

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L  +   G +P+  T T +M G C  G   +++   ++ + +G   N V++ TL NG 
Sbjct: 108 SVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGL 167

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G     +  L++++  +   + + Y+T+++GL K   +  A   + EM   G   + 
Sbjct: 168 CKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNV 227

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA- 389
               +L+ G C+        L  A+ +  +M  K    +  TY I+I  L K  K  EA 
Sbjct: 228 ITYTTLIGGFCLAGQ-----LTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAK 282

Query: 390 --LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             L  +H+    G     +T+ +++   C    +DKA  L   M E    P++ +Y  LI
Sbjct: 283 NLLAEMHYR---GQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALI 339

Query: 448 TKLDQLEKSYDACALYGAALKQG 470
             L +  +  DA  L+   L +G
Sbjct: 340 DGLCKGGRLKDAQKLFQDLLVKG 362



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 119/258 (46%), Gaps = 35/258 (13%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I     I+   T  +V  +N ++  L        A  F+SE ++ G+ PN  T++ +I  
Sbjct: 177 IKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGG 236

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C       A  +++ M     +PNV T+ IL+++LCK G++KEA  +L +M   G   +
Sbjct: 237 FCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPAD 296

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-- 247
           + TY  LL G C    +++A  + M +K  G++P+ YTYTA++DG CK GR  +A +L  
Sbjct: 297 VVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQ 356

Query: 248 --------------------------LNEAI-------ERGVTPNVVTFNTLFNGYCKEG 274
                                     L+EA+       + G  PNVVTF  +     K+ 
Sbjct: 357 DLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKD 416

Query: 275 TPMKGVGLLKLMKKRNCL 292
              K   LL  M  +  L
Sbjct: 417 ENDKAEKLLHEMIAKGLL 434



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 137/303 (45%), Gaps = 5/303 (1%)

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           +A+   + M  +   P I  +  +L  L  +     A  +   ++  G++P++ T   ++
Sbjct: 35  DAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILI 94

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           + FC +G+ + +  +L + ++ G  PN +T  TL  G C +G   K V     +  +   
Sbjct: 95  NCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQ 154

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            +++SY TLLNGL K G+ R A+   + +      ++  M N+++ GLC     +  L+ 
Sbjct: 155 MNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLC-----KDKLVN 209

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +AY  + +M  +    +  TY  +I       +   A   L+  I     P   T+  +I
Sbjct: 210 EAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILI 269

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            ALC EGK+ +A  LL  M+   +     +Y  L+    + +    A AL+    + G+ 
Sbjct: 270 DALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQ 329

Query: 473 PQR 475
           P +
Sbjct: 330 PNK 332



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 1/175 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        +D + K   +KE  ++   +   G    V  +  LL         + A  
Sbjct: 259 NPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATA 318

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F +   +G+ PN +T++ +I   C      +A+K+   +   G   +V T+ +++  LC
Sbjct: 319 LFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLC 378

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           K G L EAL +  +M   GC PN+ T+  +++ L      ++A ++L  +   GL
Sbjct: 379 KEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/206 (19%), Positives = 91/206 (44%), Gaps = 5/206 (2%)

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A+   N  +    TP +V F  +     K       + L K M+ +   P+ ++ + L
Sbjct: 34  DDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNIL 93

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +N     G++  + S+  ++++ G++ +   + +L++GLC+K   +K +        +K+
Sbjct: 94  INCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSV-----HFHDKV 148

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +    +  +YG ++  L K  +T  A+  L    +       + +N +I  LC +  +
Sbjct: 149 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLV 208

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI 447
           ++A      M      P+  +Y  LI
Sbjct: 209 NEAYDFYSEMNARGIFPNVITYTTLI 234


>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Brachypodium distachyon]
          Length = 560

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 199/409 (48%), Gaps = 13/409 (3%)

Query: 49  PRSLQAQRFVDRI--KASPLKERIDIFDSIKKDGTNWSVSDFNDLLM-ALVMLNEQETAV 105
           P S  + R+V  +  ++S   + + +FD +     ++  + F   L  +       + A 
Sbjct: 118 PPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLDAAA 177

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNS 164
              S+A  +G    ++ ++ ++  +       +A  + +     G Y P+V +F + +  
Sbjct: 178 ALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKG 237

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL-KP 223
           +C+ G +++ALE++++M   GC P+  T N L+ GLC V  V    E+L  ++ DG+  P
Sbjct: 238 VCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMP 297

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V TYT+V+ G+CK GR  +AM + N+ I  G TPN VT+N L NGY K G     V + 
Sbjct: 298 NVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVY 357

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM- 342
           + M  R C PD +++STL++G  + G++  A+  + EM ++  + +    + ++   C  
Sbjct: 358 QQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQ 417

Query: 343 -KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
            +S E    L++   +   +  +  + +P     VI  L KG K DEA + L      G 
Sbjct: 418 NRSAEALRFLKE-LNMRTDIAPRAFICNP-----VIDVLCKGGKVDEANLILMEMEGKGC 471

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            P   T+  +I   C +G+I +A+     M +    P   + +  I  L
Sbjct: 472 RPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCL 520



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 178/382 (46%), Gaps = 36/382 (9%)

Query: 102 ETAVKFFSEASSYGLA--PNSWTFSIMIRCYCNKNDFFEARKVIDCMFD-NGYHPNVTTF 158
            + ++ FS   S  LA  P++ ++  +I   C  +   +A K+ D M D +G+ PN    
Sbjct: 101 SSTLQLFSALHSSQLAIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFL 160

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VK 217
           + L  S   +G L  A  +L +  + GC      YN L+      GRV++A  +    ++
Sbjct: 161 SFLAGSCANAGFLDAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQ 220

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
                PDV+++   + G C+VG   +A+EL+    E G +P+ VT N L  G C+     
Sbjct: 221 GGAYSPDVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVS 280

Query: 278 KGVGLLKLMKKRN-CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
           +G  +L+ +++   C+P+ ++Y+++++G  K G++  A++++ +M+  G   +    N L
Sbjct: 281 RGREVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVL 340

Query: 337 LRGL--------CMKSWEEKDL----------------------LEDAYQVFEKMTKKVS 366
           + G          +  +++  L                      L+DA + + +M++   
Sbjct: 341 INGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQI 400

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHA-IEMGHIPRTITFNNVIQALCGEGKIDKAL 425
             +  T+ I+I +  K  ++ EAL  L    +     PR    N VI  LC  GK+D+A 
Sbjct: 401 QPNAHTFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEAN 460

Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
           L+L  M      P + +Y +LI
Sbjct: 461 LILMEMEGKGCRPDKYTYTILI 482



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 1/225 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  +++ + +++ +   GT  +   +N L+          +AV  + +       P+  
Sbjct: 311 KSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVV 370

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS +I  YC      +A +    M      PN  TF+I++ S CK  R  EAL  L ++
Sbjct: 371 TFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLKEL 430

Query: 182 G-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             R    P     N ++  LC  G+V+EA  +LM ++  G +PD YTYT ++ G C  GR
Sbjct: 431 NMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCMKGR 490

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            +EA+   N+ ++ G +P+ +T N+      K G P +   ++K+
Sbjct: 491 ISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEVDRIMKI 535



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 4/242 (1%)

Query: 71  DIFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++   +++DG    +V  +  ++         E A+  +++    G  PN+ T++++I  
Sbjct: 284 EVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLING 343

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           Y    +   A  V   M      P+V TF+ L++  C+ G+L +A+    +M +   +PN
Sbjct: 344 YGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPN 403

Query: 190 IQTYNCLLKGLCYVGRVEEAYEML--MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
             T++ ++   C   R  EA   L  +N++ D + P  +    V+D  CK G+ +EA  +
Sbjct: 404 AHTFSIIILSFCKQNRSAEALRFLKELNMRTD-IAPRAFICNPVIDVLCKGGKVDEANLI 462

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L E   +G  P+  T+  L  G+C +G   + +     M    C PD I+ ++ +  LLK
Sbjct: 463 LMEMEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLK 522

Query: 308 WG 309
            G
Sbjct: 523 AG 524



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 1/168 (0%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI- 143
           V  F+ L+       + + A++ ++E S Y + PN+ TFSI+I  +C +N   EA + + 
Sbjct: 369 VVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLK 428

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           +        P       +++ LCK G++ EA  +L +M   GC+P+  TY  L+ G C  
Sbjct: 429 ELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCMK 488

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           GR+ EA      + + G  PD  T  + +    K G  +E   ++  A
Sbjct: 489 GRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEVDRIMKIA 536


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 199/454 (43%), Gaps = 65/454 (14%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +   + + + +   G    V  +N L+       + + A++      + G+ PN  
Sbjct: 199 KVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVV 258

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  YC      EA  + + M  +G  P+V T + LV+ LC+ G+  EA  +  +M
Sbjct: 259 TYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREM 318

Query: 182 GRIGCKPNIQTYNCLLKGLCYV-----------------------------------GRV 206
            +IG  PN  TY  L+  L                                      G++
Sbjct: 319 DKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKI 378

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           EEA ++L + ++D + P+  TYT ++D  C+ G  + A ++L +  E+ V PNVVTF+++
Sbjct: 379 EEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSI 438

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            NG  K G   K    ++ MK     P+ ++Y TL++G  K+     A+ ++++M+  G 
Sbjct: 439 INGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGV 498

Query: 327 EVDERMMNSLLRGL-----------CMKSWEEKDLLED-------------------AYQ 356
           E +  +++SL+ GL             K  +E+ LL D                   A++
Sbjct: 499 EANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFK 558

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           V +++ +K    D   Y + I  L    K  EA   L      G  P   T+N +I A C
Sbjct: 559 VGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARC 618

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            EGK  KAL LL  M  ++  P+  +Y  L+  L
Sbjct: 619 REGKTSKALKLLKEMKRNSIKPNLITYTTLVVGL 652



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 175/389 (44%), Gaps = 9/389 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  + + G      ++  L+  L        A K   E     L+P++  +++ I C C
Sbjct: 524 LFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLC 583

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
               F EA+  +  M + G  P+  T+  ++ + C+ G+  +AL++L +M R   KPN+ 
Sbjct: 584 TLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLI 643

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+ GL   G V++A  +L  + + G  P   T+  V+       R +  +E+    
Sbjct: 644 TYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELM 703

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  G+  ++  +NTL +  C  G       +L  M  R   PD I+++ L+ G  K   +
Sbjct: 704 MGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHL 763

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A +I+ +M+  G   +    N+LL GL     E    + +A  V   M KKV + +P 
Sbjct: 764 DNAFAIYAQMLHQGLSPNIATFNTLLGGL-----ESAGRIGEADTVLSDM-KKVGL-EPN 816

Query: 372 --TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY I++    K     EAL      +  G IP+  T+N+++      G +++A  L  
Sbjct: 817 NLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFS 876

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            M     + + ++YD+L+    +L    +
Sbjct: 877 EMKRRGVLHTSSTYDILLNGWSKLRNGIE 905



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 171/386 (44%), Gaps = 7/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N  L AL        A    SE    G++ +  T S  +   C      EA  + + + 
Sbjct: 118 YNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLV 177

Query: 148 -DNGYHP-NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
              G    +V  +  L++  CK   +  AL V+++M   G   ++  YN L+ G  + G 
Sbjct: 178 RGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGD 237

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            + A E++  +K DG++P+V TYTA++  +CK    +EA  L    +  GV P+VVT + 
Sbjct: 238 ADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSA 297

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G C++G   +   L + M K    P+ ++Y TL++ L K  +   ++ +  EMV  G
Sbjct: 298 LVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRG 357

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
             +D  M  +L     M    ++  +E+A  V           +  TY +++    +   
Sbjct: 358 VVMDLVMYTAL-----MDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGN 412

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D A   L    E   IP  +TF+++I  L   G + KA   +  M +    P+  +Y  
Sbjct: 413 IDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGT 472

Query: 446 LITKLDQLEKSYDACALYGAALKQGV 471
           LI    + +    A  +Y   L +GV
Sbjct: 473 LIDGFFKFQGQEAALDVYRDMLHEGV 498



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/489 (24%), Positives = 194/489 (39%), Gaps = 76/489 (15%)

Query: 57  FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
            +DR+ K   ++E  D+    + D    +   +  L+ A       + A +   +     
Sbjct: 368 LMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKS 427

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           + PN  TFS +I     +    +A   +  M D+G  PNV T+  L++   K    + AL
Sbjct: 428 VIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAAL 487

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG- 234
           +V   M   G + N    + L+ GL   G +E A  +  ++   GL  D   YT +MDG 
Sbjct: 488 DVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGL 547

Query: 235 ----------------------------------FCKVGRSNEAMELLNEAIERGVTPNV 260
                                              C +G+ +EA   L E    G+ P+ 
Sbjct: 548 FKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQ 607

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            T+NT+    C+EG   K + LLK MK+ +  P+ I+Y+TL+ GLL+ G ++ A  +  E
Sbjct: 608 ATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNE 667

Query: 321 MVRFGF------------------------EVDERMM-----------NSLLRGLCMKSW 345
           M   GF                        E+ E MM           N+L+  LC    
Sbjct: 668 MASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHG- 726

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
               +  +A  V ++M  +    D  T+  +I    K    D A       +  G  P  
Sbjct: 727 ----MARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNI 782

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
            TFN ++  L   G+I +A  +L  M +    P+  +YD+L+T   +     +A  LY  
Sbjct: 783 ATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCE 842

Query: 466 ALKQGVIPQ 474
            + +G IP+
Sbjct: 843 MVSKGFIPK 851



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 1/276 (0%)

Query: 49  PRSLQAQRFVDRIKASPLKERI-DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P SL  QR +     S   + I +I + +   G +  ++ +N L+  L        A   
Sbjct: 675 PTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVV 734

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E  + G+AP++ TF+ +I  +C  +    A  +   M   G  PN+ TF  L+  L  
Sbjct: 735 LDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLES 794

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +GR+ EA  VL  M ++G +PN  TY+ L+ G        EA  +   + + G  P   T
Sbjct: 795 AGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAST 854

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y ++M  F K G  N+A EL +E   RGV     T++ L NG+ K    ++   LLK MK
Sbjct: 855 YNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMK 914

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           +    P K + S++     + G    A  + K + +
Sbjct: 915 ELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 114/254 (44%), Gaps = 7/254 (2%)

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           +  D  +Y   +    + G    A  +L+E  +RGV+ + VT +T   G C+ G   +  
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170

Query: 281 GLLKLMKKRNCLP--DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            L +++ +   +   D + ++ L++G  K   +  A+++ + M   G  +D    NSL+ 
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           G     +   D  + A +V E+M       +  TY  +I    KGK  DEA       + 
Sbjct: 231 GF----FHSGD-ADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVR 285

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            G +P  +T + ++  LC +G+  +A  L   M +    P+  +Y  LI  L +  +  +
Sbjct: 286 SGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSE 345

Query: 459 ACALYGAALKQGVI 472
           +  L G  + +GV+
Sbjct: 346 SLGLLGEMVSRGVV 359


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 197/391 (50%), Gaps = 5/391 (1%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           F   +K   +++ ++   ++ + G    + D N +L  L M N+   A  FF      G 
Sbjct: 212 FNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGP 271

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           +PN  TFS +I  YC +    EA  + + M + G  P++  ++IL+N L ++G+L+E   
Sbjct: 272 SPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNS 331

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +       G K ++  ++ ++     VG + +A E+   +  +G+ P+V TY+ +++G C
Sbjct: 332 LFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLC 391

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + GR  EA  +  + +++G+ P+V+T+++L +G+CK      G GL  +M ++  +PD +
Sbjct: 392 RNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVV 451

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
             S L+NGL + G +  A+  F + V+ G  ++  + N+L+ G C +    +D L    +
Sbjct: 452 VCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG-CFRLKRTRDGL----K 506

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           ++  M     + D  TY ++++ L +  + DEAL      ++ G  P  I +  +I   C
Sbjct: 507 MYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC 566

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            +      L +  LM  +   P    Y++LI
Sbjct: 567 KKRDPATGLQIFKLMQSNGIFPDICIYNVLI 597



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 189/447 (42%), Gaps = 75/447 (16%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+E   +F      G    V  F+ ++ A V + +   A++ ++     G++PN  
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+I   C      EA  V   +   G  P+V T++ L++  CKS  L++   +   M
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM 441

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV------------------------K 217
            R G  P++   + L+ GL   G ++EA                                
Sbjct: 442 LRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRT 501

Query: 218 NDGLK-----------PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            DGLK           PDV TYT ++ G  + GR +EA+ L  + +++G +P+ + + TL
Sbjct: 502 RDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTL 561

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G+CK+  P  G+ + KLM+     PD   Y+ L+N   + G +   + + +E++++G 
Sbjct: 562 IDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGL 621

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           E D    N+++ G C            + ++F K  K   V   G      RT       
Sbjct: 622 EPDIVTYNTMICGYC------------SLKIFSKAIKLFEVLKCG------RTQ------ 657

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
                           P  ITF  +I A C +G++D A+L+   M E    P+  +Y  L
Sbjct: 658 ----------------PNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCL 701

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I    + E +  A  LY   L   V P
Sbjct: 702 IDGYFKTENTESAFELYEKMLGDRVSP 728



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/479 (22%), Positives = 197/479 (41%), Gaps = 79/479 (16%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   L + I+++  + K+G + +V  ++ L+  L        A   F +    GL P+ 
Sbjct: 356 VRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSV 415

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+S +I  +C   +  +   +   M   G+ P+V   ++L+N L + G + EAL    Q
Sbjct: 416 LTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQ 475

Query: 181 -----------------------------------MGRIGCKPNIQTYNCLLKGLCYVGR 205
                                              MG     P++ TY  L+KGL   GR
Sbjct: 476 AVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGR 535

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK---------------------------- 237
           ++EA  +   +   G  PD   Y  ++DGFCK                            
Sbjct: 536 LDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNV 595

Query: 238 -------VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
                   G     +ELL E I+ G+ P++VT+NT+  GYC      K + L +++K   
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             P+ I+++ L++   K G++  A+ IF  M+  G E +    + L+ G     + + + 
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG-----YFKTEN 710

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
            E A++++EKM       +  +Y I+I  L K    +EA +    AI    +P  I +  
Sbjct: 711 TESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGI 770

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           +I+  C  G++ +A++L    Y+H  +      D+L   L +        ++Y     +
Sbjct: 771 LIRGYCKVGRLAEAMML----YDHMLVNGIMPDDLLQKALAEYGFQDSQASIYSTVFPE 825



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 178/439 (40%), Gaps = 71/439 (16%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN-------------------DFFEARKV 142
           E   +F     +YG  P S  +S ++ CYC                        + A ++
Sbjct: 123 EVLGEFHGSFRNYGSNP-STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEM 181

Query: 143 IDCMFDN--------GYHP---NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           +D + D+         Y      +  +  + NS  K G +++ L     +   G  P I 
Sbjct: 182 LDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIV 241

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
             N +LKGLC   ++  A +    +   G  P++ T++ +++ +CK  R +EA  L N  
Sbjct: 242 DCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLM 301

Query: 252 IERGVTPNVVTFNTLFNG-----------------------------------YCKEGTP 276
           IE+G+ P++V ++ L NG                                   Y + G  
Sbjct: 302 IEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDL 361

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            K + +   M K    P+ ++YS L+NGL + G++  A  +F ++++ G E      +SL
Sbjct: 362 GKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSL 421

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           + G C     + + L D + ++  M +K  V D     ++I  L +    DEAL     A
Sbjct: 422 IDGFC-----KSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQA 476

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           ++ G       FN +I       +    L +  LM  +  IP   +Y +L+  L +  + 
Sbjct: 477 VKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRL 536

Query: 457 YDACALYGAALKQGVIPQR 475
            +A AL+   LK+G  P  
Sbjct: 537 DEALALFFQLLKKGFSPDH 555


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 191/402 (47%), Gaps = 10/402 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I+ ++K+DG   +V  +N LL AL   N  + A K   E S+ G  P+  +++ +I    
Sbjct: 171 IYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMS 230

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EAR++        + PNV+ +  L+N  C+  ++KE   +L QM   G  PN+ 
Sbjct: 231 KLGKVEEAREL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVI 285

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY+ ++  L  +G VE A  +   +   G  P+VYT+T++M G+   GR  EA+ + N  
Sbjct: 286 TYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRM 345

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            E G  PNVV +NTL +G C  G   + V +   M++  C P+  +Y  L++G  K G +
Sbjct: 346 AEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDL 405

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  I+ +M+  G   +  +  S++  LC  S     +   A+ + EKM+      +  
Sbjct: 406 VGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSS-----MFSQAWSLIEKMSTDNCPPNTV 460

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           T+   I+ L    + + A+       + G  P   T+N V+  L  E +I +AL L+  M
Sbjct: 461 TFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEM 520

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            E     +  +Y+ +      + K  +A  L G  L  GV P
Sbjct: 521 EEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKP 562



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 160/314 (50%), Gaps = 6/314 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E ++I++ + ++G   +V  +N L+  L    +   AV   S+    G +PN  T+  +I
Sbjct: 337 EALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALI 396

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             +    D   A ++ + M  NG  PNV  +T +VN LC+S    +A  ++++M    C 
Sbjct: 397 DGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCP 456

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  T+N  +KGLC  GRVE A  +   ++  G  P++ TY  V+DG  K  R  EA+EL
Sbjct: 457 PNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALEL 516

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           + E  E+G+  N+VT+NT+F G+C  G   + + LL  M      PD I+Y+TL      
Sbjct: 517 VTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCM 576

Query: 308 WGKIRPAVSIFKEMVRFGFEVDE-RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
            GK++ A+ +  ++   G  V E     SLL G+C      +  +E+A    +KM  +  
Sbjct: 577 QGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGIC-----NQIGVEEAVLYLDKMLNEGI 631

Query: 367 VTDPGTYGIVIRTL 380
             +  T+  ++R L
Sbjct: 632 CLNAATWNALVRGL 645



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 184/387 (47%), Gaps = 8/387 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE   +   + + G + +V  ++ ++ +L  +   E A+  +++    G +PN +TF+ 
Sbjct: 265 VKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTS 324

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++ Y  +    EA  + + M + G+ PNV  +  L++ LC  G++ EA+ V  +M R G
Sbjct: 325 LMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNG 384

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN+ TY  L+ G    G +  A E+   +  +G  P+V  YT++++  C+    ++A 
Sbjct: 385 CSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAW 444

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L+ +       PN VTFNT   G C  G     + L   M++  C P+  +Y+ +L+GL
Sbjct: 445 SLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGL 504

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
           LK  +I+ A+ +  EM   G E++    N++  G C          E+A ++  KM    
Sbjct: 505 LKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFC-----NVGKFEEALKLLGKMLVGG 559

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH--IPRTITFNNVIQALCGEGKIDK 423
              D  TY  +        K   A I L   +  G   +P    + +++  +C +  +++
Sbjct: 560 VKPDAITYNTLTYAYCMQGKVKTA-IQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEE 618

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKL 450
           A+L L  M       +  +++ L+  L
Sbjct: 619 AVLYLDKMLNEGICLNAATWNALVRGL 645



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 190/409 (46%), Gaps = 16/409 (3%)

Query: 48  NPRSLQAQRFVDRIKASPLKERIDI------FDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
           N ++ Q  +   +I    L    D+         +K +G + S   F +++     +   
Sbjct: 71  NSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLA 130

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A+K F     +G  P    ++ ++    ++N F     +   M  +G  PNV T+ IL
Sbjct: 131 EQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNIL 190

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + +LCK+ R+  A ++L +M   GC+P++ +Y  ++  +  +G+VEEA E+ +       
Sbjct: 191 LKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIR-----F 245

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +P+V  Y A+++GFC+  +  E   LL + +E+G+ PNV+T++T+ +     G     + 
Sbjct: 246 QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALA 305

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +   M  R C P+  ++++L+ G    G++  A++I+  M   GFE +    N+L+ GLC
Sbjct: 306 VWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLC 365

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                    + +A  V  KM +     +  TYG +I    K      A    +  +  G 
Sbjct: 366 -----SHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGC 420

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           IP  + + +++  LC      +A  L+  M      P+  +++  I  L
Sbjct: 421 IPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGL 469



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 129/267 (48%), Gaps = 5/267 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L    +I++ +  +G   +V  +  ++  L   +    A     + S+    PN+ 
Sbjct: 401 KAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTV 460

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+  I+  C       A  +   M   G  PN+ T+  +++ L K  R+KEALE++ +M
Sbjct: 461 TFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEM 520

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + N+ TYN +  G C VG+ EEA ++L  +   G+KPD  TY  +   +C  G+ 
Sbjct: 521 EEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKV 580

Query: 242 NEAMELLNEAIERG-VTPNVVTFNTLFNGYCKE-GTPMKGVGLLKLMKKRNCLPDKISYS 299
             A++LL++    G   P V  + +L  G C + G     + L K++ +  CL +  +++
Sbjct: 581 KTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICL-NAATWN 639

Query: 300 TLLNGLL-KWGKIRPAVSIFKEMVRFG 325
            L+ GL    G + P + I  +++  G
Sbjct: 640 ALVRGLFNSLGHLGP-IHILDDILTSG 665


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 162/344 (47%), Gaps = 5/344 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A  F+      G+ P +  F++++R          AR V D M   G  P V TF  L++
Sbjct: 98  AYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMS 157

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            +CK+  L  A  +   M + G  P++ TY   ++GLC  GR+++A EM   +   GL P
Sbjct: 158 GMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNP 217

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +    T ++D  CK G     +EL  E   RGV  ++V +N L NG+C+         ++
Sbjct: 218 NTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIV 277

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           + M+K    PDK++Y+TL++G  K G++  A+ + +EM   G  +D+    +L+ GL   
Sbjct: 278 EEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKA 337

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                    DA ++  +M +     D  TY +VI    K         HL      G  P
Sbjct: 338 GRS-----VDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNP 392

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             +T+N V+   C  G++  A +LL  M      P+  +Y++L+
Sbjct: 393 GIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILL 436



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 167/380 (43%), Gaps = 41/380 (10%)

Query: 43  LDLKENPRSLQAQRFV-DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
           LD    P + Q    + D I++  L    ++FD + + G   +V  FN L+  +   ++ 
Sbjct: 106 LDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDL 165

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
             A       +  G+AP+ +T+   I+  C      +A ++ + M + G +PN    T L
Sbjct: 166 NNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTL 225

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +++ CK G +   LE+  +M   G K ++  YN L+ G C V  ++ A +++  ++ DGL
Sbjct: 226 IDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGL 285

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           KPD  TYT ++DG CK G  + AME+  E  + GV  + VT+  L +G  K G  +    
Sbjct: 286 KPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAER 345

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +L  M +    PD  +Y+ +++   K G ++      KEM   G        N ++ G C
Sbjct: 346 ILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFC 405

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                                                +LG+ K  D   + L+  + +G 
Sbjct: 406 -------------------------------------SLGQMKNAD---MLLNAMLNIGV 425

Query: 402 IPRTITFNNVIQALCGEGKI 421
            P  IT+N ++   C  GK+
Sbjct: 426 CPNDITYNILLDGHCKHGKV 445



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 5/269 (1%)

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           V EAY   +++ + G+ P+   +  +M    + G+   A  + +E + RGV P VVTFNT
Sbjct: 95  VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 154

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G CK         L  LM K    PD  +Y   + GL K G+I+ A+ +F+EM   G
Sbjct: 155 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 214

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              +  ++ +L+   C    +E D+       +E  T+ V   D   Y  ++    + + 
Sbjct: 215 LNPNTVVLTTLIDAHC----KEGDVTAGLELRWEMATRGVK-ADLVAYNALVNGFCRVRD 269

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
              A   +    + G  P  +T+  +I   C EG++D A+ +   M +        +Y  
Sbjct: 270 MKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTA 329

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQ 474
           LI+ L +  +S DA  +    ++ G+ P 
Sbjct: 330 LISGLSKAGRSVDAERILCEMMEAGLQPD 358



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 5/183 (2%)

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+   ++ L+  +++ GK+  A ++F EM+R G +      N+L+ G+C  S      L 
Sbjct: 112 PEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD-----LN 166

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +A  +   M K     D  TYG  I+ L K  +  +A+       E G  P T+    +I
Sbjct: 167 NANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLI 226

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            A C EG +   L L + M          +Y+ L+    ++     A  +     K G+ 
Sbjct: 227 DAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLK 286

Query: 473 PQR 475
           P +
Sbjct: 287 PDK 289


>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
          Length = 375

 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 178/341 (52%), Gaps = 6/341 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++ A+    + + A +  +   S    PN+  ++ +++ +C+   + +A +++D + 
Sbjct: 13  YNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIERWVDANEILDEVV 72

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                PN  T  + +N+LC+ G L++    L++M + GC  N+ TYN ++ GLC  G V+
Sbjct: 73  SENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIGGLCEQGNVD 132

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A E+L N+++ G KPD+ TY  V+ G C   R  +A EL+ +  +     +  TFNT+ 
Sbjct: 133 SALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLRDNSTFNTII 192

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           + +C++G  ++ + + K M ++ C P+  +YST++ GL+K  K+  A+ +  EM   GF 
Sbjct: 193 SFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALELLNEMANKGFN 252

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D+  +      +  KS  ++D +E+  QV  K+           Y  V+  L +  KT+
Sbjct: 253 TDKMYL------VLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTN 306

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            A+  L   +  G +P   T+  +I+ L  EG + +A  LL
Sbjct: 307 YAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLKEARELL 347



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 166/336 (49%), Gaps = 6/336 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN+ T++++I   C + D  +AR++++ +      PN   +  ++   C   R  +A
Sbjct: 5   GCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIERWVDA 64

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            E+LD++    C PN  T N  +  LC  G +++    L  +   G   +V TY A++ G
Sbjct: 65  NEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIGG 124

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            C+ G  + A+ELL+     G  P++VT+NT+  G C          L+  M + + L D
Sbjct: 125 LCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLRD 184

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
             +++T+++   + G I  A+ +FK+M   G   +    ++++ GL   S      +E A
Sbjct: 185 NSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASK-----MEQA 239

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++  +M  K   TD   Y ++ ++L K  K +E +  +H   + G  P+T+ +N V+  
Sbjct: 240 LELLNEMANKGFNTDK-MYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLG 298

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           LC  GK + A+ +L  M     +P  ++Y +LI  L
Sbjct: 299 LCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGL 334



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 126/249 (50%), Gaps = 1/249 (0%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
            + + K G   +V  +N ++  L      ++A++  S   S+G  P+  T++ +++  C+
Sbjct: 103 LEKMSKHGCTTNVVTYNAIIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCS 162

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
            + + +A +++  M  N    + +TF  +++  C+ G + +ALEV  QM   GC PN  T
Sbjct: 163 ADRWEDAEELMIKMSQNDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTT 222

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y+ ++ GL    ++E+A E+L  + N G   D   Y  +     K  +  E ++++++  
Sbjct: 223 YSTIIGGLVKASKMEQALELLNEMANKGFNTD-KMYLVLTKSLNKEDKIEEVVQVVHKLQ 281

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           + G++P  V +NT+  G C+ G     + +L  M    C+PD+ +Y  L+ GL   G ++
Sbjct: 282 DSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLK 341

Query: 313 PAVSIFKEM 321
            A  +   +
Sbjct: 342 EARELLSRL 350



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 41/294 (13%)

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY----- 270
           ++ +G +P+  TY  ++D  C+ G  ++A ELLN    R   PN V +NT+  G+     
Sbjct: 1   MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60

Query: 271 ------------------------------CKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
                                         C++G   K    L+ M K  C  + ++Y+ 
Sbjct: 61  WVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNA 120

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++ GL + G +  A+ +   M  FG + D    N++L+GLC       D  EDA ++  K
Sbjct: 121 IIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLC-----SADRWEDAEELMIK 175

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M++   + D  T+  +I    +     +AL       E G  P + T++ +I  L    K
Sbjct: 176 MSQNDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASK 235

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +++AL LL  M       +   Y +L   L++ +K  +   +       G+ PQ
Sbjct: 236 MEQALELLNEMANKG-FNTDKMYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQ 288



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 115/227 (50%), Gaps = 1/227 (0%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++  +++  G    +  +N +L  L   +  E A +   + S      ++ TF+ +I  
Sbjct: 135 LELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLRDNSTFNTIISF 194

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C K    +A +V   M + G +PN TT++ ++  L K+ ++++ALE+L++M   G   +
Sbjct: 195 WCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALELLNEMANKGFNTD 254

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
            + Y  L K L    ++EE  +++  +++ G+ P    Y  V+ G C+ G++N A+++L 
Sbjct: 255 -KMYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLA 313

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + +  G  P+  T+  L  G   EG   +   LL  +  R+ L + +
Sbjct: 314 DMVSCGCMPDESTYIILIEGLFYEGYLKEARELLSRLCSRDVLSNSL 360



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 79/146 (54%), Gaps = 1/146 (0%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + +++F  + + G N + + ++ ++  LV  ++ E A++  +E ++ G   +   + ++ 
Sbjct: 203 QALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALELLNEMANKGFNTDKM-YLVLT 261

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           +    ++   E  +V+  + D+G  P    +  ++  LC++G+   A++VL  M   GC 
Sbjct: 262 KSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCM 321

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEML 213
           P+  TY  L++GL Y G ++EA E+L
Sbjct: 322 PDESTYIILIEGLFYEGYLKEARELL 347


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 191/404 (47%), Gaps = 15/404 (3%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           + +DG    V  +  ++  L    + + A +   E    G+ P+ +TFS +I  +CN   
Sbjct: 72  VTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARK 131

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI---GCKPNIQT 192
             EA K+   +  +    +  + + L+  LC+  R+ EA E+  +M        KP++ T
Sbjct: 132 VDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVT 191

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y  L+ G C  G +E+A +ML  ++     P+V TY++++ G CK G  ++A++L     
Sbjct: 192 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 251

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
            +G  PNVVT+ TL +G C          L+  M    C  D +SY+ LL+G  + G+I 
Sbjct: 252 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIE 311

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG- 371
            A  +FKEM       D      L+RG C  S      LE+A  + E M K  +  DP  
Sbjct: 312 EAKQLFKEMAAKSCLPDRITYTCLVRGFCNASR-----LEEARFLLENM-KTAAGIDPDV 365

Query: 372 -TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY IV+    + K+  EA   +   I     P  +T++++I  LC  G+++ A+ +L  
Sbjct: 366 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVL-- 423

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             ++   P   +Y ++I  L   +++ +A  L    + + V P 
Sbjct: 424 --KNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPS 465



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 171/345 (49%), Gaps = 13/345 (3%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+  T++ +I  +C   +  +A K++  M      PNV T++ L++ LCK+G L +AL++
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
             +M   GC PN+ TY  L+ GLC   +V+ A  ++  +       D  +Y A++DG+C+
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL-PDKI 296
           +GR  EA +L  E   +   P+ +T+  L  G+C      +   LL+ MK    + PD +
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +YS ++ G  +  +   A    +EM+      +    +SL+ GLC     +   +  A +
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLC-----KAGRVNHAME 421

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           V     K V   D  TY IVI  L    +T+EAL  L   +     P   TFN+VI ALC
Sbjct: 422 VL----KNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALC 477

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYD 458
             G +D+A  LL  M  H   P   +Y  L+   ++  ++E +Y+
Sbjct: 478 RLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE 522



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 171/370 (46%), Gaps = 13/370 (3%)

Query: 76  IKKDGTNW--SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           +++DG  W   V  +  L+         E A+K           PN  T+S ++   C  
Sbjct: 179 MREDGA-WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKA 237

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
            D  +A  +   M   G  PNV T+T L++ LC + ++  A  ++D+M    C  +  +Y
Sbjct: 238 GDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSY 297

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL-NEAI 252
           N LL G C +GR+EEA ++   +      PD  TYT ++ GFC   R  EA  LL N   
Sbjct: 298 NALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKT 357

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
             G+ P+VVT++ +  GY +    ++    ++ M  RN  P+ ++YS+L++GL K G++ 
Sbjct: 358 AAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVN 417

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A+ + K + +     D      ++ GLC       D  E+A  + E+M  K      GT
Sbjct: 418 HAMEVLKNVDK----PDVVTYTIVIEGLC-----GTDRTEEALTLLEEMVNKRVEPSVGT 468

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           +  VI  L +    DEA   L      G  P  +T+  +++     G+++ A  L  +M 
Sbjct: 469 FNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 528

Query: 433 EHAKIPSRTS 442
             AK  S  +
Sbjct: 529 RKAKKSSSAA 538



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 162/329 (49%), Gaps = 12/329 (3%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG--CKPNIQTYNCLLKGLCYVGRVEEAY 210
           PN  T+ ++VN LCK+    +A EVL +M R G    P++ TY+ ++ G C  G ++ A 
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEM-RDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65

Query: 211 EMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
           E+L   V  DG+ PDV TYT+V+DG C+ G+ + A E++ E   +GV P+  TF+ L  G
Sbjct: 66  EILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 125

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF---GF 326
           +C      + + L K +   +C  D +S S L+ GL +  +I  A  +F+EM       +
Sbjct: 126 WCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW 185

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + D     +L+ G C KS      LE A ++   M  +  V +  TY  ++  L K    
Sbjct: 186 KPDVVTYTALIDGFC-KSGN----LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D+AL         G +P  +T+  +I  LC   K+D A LL+  M          SY+ L
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +    +L +  +A  L+     +  +P R
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLPDR 329



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 167/372 (44%), Gaps = 54/372 (14%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L + +D+F  +   G   +V  +  L+  L   ++ + A     E ++     ++ 
Sbjct: 236 KAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTV 295

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK--------- 172
           +++ ++  YC      EA+++   M      P+  T+T LV   C + RL+         
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 355

Query: 173 ---------------------------EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
                                      EA E + +M      PN  TY+ L+ GLC  GR
Sbjct: 356 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 415

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           V  A E+L NV     KPDV TYT V++G C   R+ EA+ LL E + + V P+V TFN+
Sbjct: 416 VNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNS 471

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +    C+ G   +   LL  M      P  ++Y+TLL G  + G++  A  +F+ M R  
Sbjct: 472 VIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKA 531

Query: 326 FE-------VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM-TKKVSVTDPGTYGIVI 377
            +       V E+  ++L+RGLC K+ E    ++ A  V E++ +++    +     IV 
Sbjct: 532 KKSSSAANLVPEQAFSALIRGLC-KARE----IDKAMAVVEELRSRECEPAEEDCLAIVD 586

Query: 378 RTLGKGKKTDEA 389
             L  G +T+EA
Sbjct: 587 GLLRAG-RTEEA 597



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 122/230 (53%), Gaps = 11/230 (4%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A +F  E  +  +APN+ T+S +I   C       A +V+     N   P+V T+TI++ 
Sbjct: 384 AAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLK----NVDKPDVVTYTIVIE 439

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LC + R +EAL +L++M     +P++ T+N ++  LC +G ++EA+++L+ +   GL+P
Sbjct: 440 GLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEP 499

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLN----EAIERGVTPNVV---TFNTLFNGYCKEGTP 276
            + TYT +++GF + GR   A EL      +A +     N+V    F+ L  G CK    
Sbjct: 500 GMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREI 559

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            K + +++ ++ R C P +     +++GLL+ G+   A  +   + + G 
Sbjct: 560 DKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 37/254 (14%)

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK-RNCLPDKISYSTLLNGLLKWGKIRPA 314
           V PN  T+N + NG CK     K   +LK M+  ++  PD ++YST++NG  K G++  A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 315 VSIFKEMV-RFGFEVDERMMNSLLRGLC------------------------------MK 343
             I +EMV R G   D     S++ GLC                              + 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM---- 399
            W     +++A ++++++       D  +   +I  L + ++  EA   L   +EM    
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAY-ELFQEMEMREDG 183

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
              P  +T+  +I   C  G ++KA+ +L +M     +P+  +Y  L+  L +      A
Sbjct: 184 AWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 243

Query: 460 CALYGAALKQGVIP 473
             L+     +G +P
Sbjct: 244 LDLFRRMTSKGCVP 257



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 109/235 (46%), Gaps = 12/235 (5%)

Query: 23  IPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGT 81
           +  +++   F  A+    E +     P ++     +D + KA  +   +++  ++ K   
Sbjct: 372 VAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKP-- 429

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
              V  +  ++  L   +  E A+    E  +  + P+  TF+ +I   C   D  EA K
Sbjct: 430 --DVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWK 487

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI-------QTYN 194
           ++  M  +G  P + T+T L+    ++GR++ A E+ + M R   K +        Q ++
Sbjct: 488 LLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFS 547

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
            L++GLC    +++A  ++  +++   +P      A++DG  + GR+ EA +L+N
Sbjct: 548 ALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLIN 602


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 191/389 (49%), Gaps = 5/389 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E  +IF  +  +G    +  +  L+ AL    + E A + F +  + G  P+  
Sbjct: 274 RAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQV 333

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  ++  + +  D    ++    M  +GY P+V TFTILV+ LCK+    EA    D M
Sbjct: 334 IYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM 393

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  PN+ TYN L+ GL   GR+E+A ++L  +++ G++P  YTY   +D F K G +
Sbjct: 394 RKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGET 453

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+E   +   +G+ PN+V  N       + G   +   +   +++    PD ++Y+ +
Sbjct: 454 GKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMM 513

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +    K G++  AV++  EM+R G E D  ++NSL+      S  +   +++A+Q+F++M
Sbjct: 514 MKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI-----DSLYKAGRVDEAWQMFDRM 568

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                     TY  ++  LGK  +  +A+      IE    P TI+FN ++   C   ++
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEV 628

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           + AL +   M      P   +Y+ +I  L
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVIYGL 657



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 199/438 (45%), Gaps = 30/438 (6%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++   + + ++K G   +   +N L+  L+       A++ +    S GL P+  T+S 
Sbjct: 173 LRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSA 232

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++     K D      ++  M D G  PNV TFTI +  L ++G++ EA E+  +M   G
Sbjct: 233 LMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEG 292

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P++ TY  L+  LC  G++E A E+ + +K +G KPD   Y  ++D F   G  +   
Sbjct: 293 CGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFK 352

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E  ++    G  P+VVTF  L +  CK     +      +M+K+  LP+  +Y+TL+ GL
Sbjct: 353 EFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGL 412

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL---------------------RGLC--- 341
           L+ G+I  A+ +   M   G +      N  +                     +G+    
Sbjct: 413 LRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNI 472

Query: 342 ------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
                 + S  E   L +A  +F  + +     D  TY ++++   K  + DEA+  L  
Sbjct: 473 VACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSE 532

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
            I  G  P  I  N++I +L   G++D+A  +   M +    P+  +Y+ L++ L +  +
Sbjct: 533 MIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGR 592

Query: 456 SYDACALYGAALKQGVIP 473
              A  L+ + +++   P
Sbjct: 593 VQKAIELFESMIEKKCSP 610



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 146/304 (48%), Gaps = 5/304 (1%)

Query: 71   DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
            D+F  +K  G       FN LL       +     + + E  S    P++ T++I+I   
Sbjct: 809  DLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSL 868

Query: 131  CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
               N+  +A      +  + + P   T+  L++ L K GRL+EA+ + ++M   GCKPN 
Sbjct: 869  AKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNC 928

Query: 191  QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
              +N L+ G   +G  E A ++   + N+G++PD+ +YT ++D  C  GR +EA+   NE
Sbjct: 929  AIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNE 988

Query: 251  AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
                G+ P+ + +N + NG  K     + + L   M+ R  +PD  +Y++L+  L   G 
Sbjct: 989  LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048

Query: 311  IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
            +  A  +++E+   G E D    N+L+RG  +    E      AY V++ M       + 
Sbjct: 1049 VEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEH-----AYTVYKNMMVDGCNPNI 1103

Query: 371  GTYG 374
            GTY 
Sbjct: 1104 GTYA 1107



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 149/311 (47%), Gaps = 12/311 (3%)

Query: 161  LVNSLCKSGRLKEALEVLDQMGR-IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            LV  LCK  R   A ++ D+  + +G  P + +YNCL+  L  V   E+A+++  ++KN 
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 220  GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            G  PD +T+  ++    K G+  E  EL  E I R   P+ +T+N + +   K     K 
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877

Query: 280  VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
            +     +   +  P   +Y  L++GL K G++  A+ +F+EM  +G + +  + N L+ G
Sbjct: 878  LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937

Query: 340  LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
                 + +    E A Q+F++M  +    D  +Y I++  L    + DEAL + +     
Sbjct: 938  -----YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992

Query: 400  GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL------DQL 453
            G  P  I +N +I  L    ++++AL L   M     +P   +Y+ L+  L      +Q 
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 454  EKSYDACALYG 464
            ++ Y+   L G
Sbjct: 1053 KRMYEELQLAG 1063



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 118/242 (48%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K++ L + +D F  +       +   +  L+  L  +   E A++ F E S YG  PN  
Sbjct: 870  KSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCA 929

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
             F+I+I  Y    D   A ++   M + G  P++ ++TILV+ LC +GR+ EAL   +++
Sbjct: 930  IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               G  P+   YN ++ GL    R+EEA  +   ++N G+ PD+YTY ++M      G  
Sbjct: 990  KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             +A  +  E    G+ P+V T+N L  GY     P     + K M    C P+  +Y+ L
Sbjct: 1050 EQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109

Query: 302  LN 303
             N
Sbjct: 1110 PN 1111



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/498 (22%), Positives = 196/498 (39%), Gaps = 79/498 (15%)

Query: 49   PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
            P  +     +D + KA  + E   +FD +K    + +V  +N LL  L      + A++ 
Sbjct: 540  PDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 599

Query: 108  FSEASSYGLAPNSWTFSIMIRCYCNKND-------FFEARKVIDCMFD------------ 148
            F        +PN+ +F+ ++ C+C KND        F    V+DC  D            
Sbjct: 600  FESMIEKKCSPNTISFNTLLDCFC-KNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLI 658

Query: 149  ----------------NGYHPNVTTFTILVNSLCKSGRLKEALEVL-DQMGRIGCKPNIQ 191
                               HP+  T   L+  L K G++ +A+ +  D M ++  + N  
Sbjct: 659  KENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRS 718

Query: 192  TYNCLLKG-----------------------------------LCYVGRVEEAYEMLMN- 215
             +  L+ G                                   LC   R   AY++    
Sbjct: 719  FWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKF 778

Query: 216  VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
             K  G+ P + +Y  ++    +V  + +A +L  +    G  P+  TFN L   + K G 
Sbjct: 779  TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGK 838

Query: 276  PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
              +   L K M  R C PD I+Y+ +++ L K   +  A+  F ++V   F    R    
Sbjct: 839  ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898

Query: 336  LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
            L+ GL      +   LE+A ++FE+M+      +   + I+I   GK   T+ A      
Sbjct: 899  LIDGLA-----KVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 396  AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
             +  G  P   ++  ++  LC  G++D+AL     +      P   +Y+ +I  L + ++
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 456  SYDACALYGAALKQGVIP 473
              +A ALY     +G++P
Sbjct: 1014 MEEALALYNEMRNRGIVP 1031



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 100/452 (22%), Positives = 190/452 (42%), Gaps = 43/452 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +++   + ++G    V   N L+ +L      + A + F       L+P   
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++     +    +A ++ + M +    PN  +F  L++  CK+  ++ AL++  +M
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM 638

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             + CKP++ TYN ++ GL    +V  A+     +K   + PD  T   ++ G  K G+ 
Sbjct: 639 TVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQI 697

Query: 242 NEAM--------------------ELLNEAIERGVTPNVVTF--NTLFNGYCKEGT---P 276
            +A+                    +L+   +        + F    + NG C+E +   P
Sbjct: 698 GDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIP 757

Query: 277 MKGV------------GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           +  V               K  KK    P   SY+ L+  LL+      A  +FK+M   
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D    N LL  +  KS +  +L E    ++++M  +    D  TY IVI +L K  
Sbjct: 818 GCAPDAFTFNMLL-AVHGKSGKITELFE----LYKEMISRRCKPDAITYNIVISSLAKSN 872

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             D+AL   +  +     P   T+  +I  L   G++++A+ L   M ++   P+   ++
Sbjct: 873 NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           +LI    ++  +  AC L+   + +G+ P  K
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLK 964



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 148/320 (46%), Gaps = 5/320 (1%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           ++ T+  +  +L   G L++   VL++M + G   N  +YN L+  L   G   EA E+ 
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVY 215

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             + ++GLKP + TY+A+M    K   S   M LL E  + G+ PNV TF        + 
Sbjct: 216 RRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRA 275

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +   + + M    C PD ++Y+ L++ L   G++  A  +F +M   G + D+ + 
Sbjct: 276 GKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIY 335

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            +LL       + +   L+   + + +M     + D  T+ I++  L K +  DEA    
Sbjct: 336 ITLL-----DKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
               + G +P   T+N +I  L   G+I+ AL LL  M      P+  +Y++ I    + 
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKS 450

Query: 454 EKSYDACALYGAALKQGVIP 473
            ++  A   +     +G++P
Sbjct: 451 GETGKAVETFEKMKAKGIVP 470


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 201/447 (44%), Gaps = 40/447 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +     +F  +   G   ++  +  L+   + + + +  V+   E S++GL P+ +
Sbjct: 251 KAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCF 310

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE-------- 173
           T+ +++   C K    EARK+ D M   G  P+V+ + I+++     G L E        
Sbjct: 311 TYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLM 370

Query: 174 ---------------------------ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
                                      A+++ ++M + G  PN+  Y  L+  LC +GRV
Sbjct: 371 VGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRV 430

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           ++A      + N+G+ P++  +T+++ G C + +  +A EL  E + +G+ PNVV FNT+
Sbjct: 431 DDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTI 490

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
               C EG  MK   L+ LM++    PD ISY+ L+ G    GK   A  +   M+  G 
Sbjct: 491 MCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGL 550

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + +E   N+LL G C         ++DAY VF++M          TY  ++  L K ++ 
Sbjct: 551 KPNECTYNTLLHGYC-----RDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRF 605

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            EA     + I  G      T+N ++  L     +D+AL +   +          +++++
Sbjct: 606 SEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIM 665

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I  L +  +  DA  L+      G++P
Sbjct: 666 IGALLKDGRKEDAMNLFATISANGLVP 692



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 208/445 (46%), Gaps = 30/445 (6%)

Query: 50  RSLQAQRFVD-RIKASPLK--ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ----- 101
           R L+ +R +  R +A  L   + + +FD         S+  FN LL A+   + +     
Sbjct: 12  RCLELERIIGARARAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSST 71

Query: 102 -ETAVKFFSEA---SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
            E  V  F+         +AP+ +T+SI++ C+C              +   G+  N   
Sbjct: 72  SELVVSCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVV 131

Query: 158 FTI-LVNSLCKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
               L+  LC + R+ EA+ VL  +M  +GC PN+ +YN LLKG C   R EEA E+L  
Sbjct: 132 VVNRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHM 191

Query: 216 VKNDGLK---PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           + +  ++   P++ +Y  V++GF   G+ ++A  L  +  ++G+ PNVVT+  + +G CK
Sbjct: 192 MADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCK 251

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                +  G+ + M  +   P+ ++Y+ L++G L  G+ +  V + KEM   G E D   
Sbjct: 252 AQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFT 311

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
              LL  LC     +K    +A ++F+ M +K    D   YGI++     G  T  AL  
Sbjct: 312 YGLLLDYLC-----KKGKCTEARKLFDSMIRKGIKPDVSIYGIILH----GYATKGALSE 362

Query: 393 LHHAIEM----GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           +H  +++    G  P    FN V  A   +  I +A+ +   M +    P+  +Y  LI 
Sbjct: 363 MHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLID 422

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L +L +  DA   +   + +GV P
Sbjct: 423 ALCKLGRVDDAELKFNQMINEGVAP 447



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 188/363 (51%), Gaps = 5/363 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + + E +DIF+ +++ G + +V ++  L+ AL  L   + A   F++  + G+APN  
Sbjct: 391 KKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIV 450

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ ++   C  + + +A ++   M + G HPNV  F  ++ +LC  GR+ +A  ++D M
Sbjct: 451 VFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLM 510

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R+G +P+I +YN L++G C VG+ +EA ++L  + + GLKP+  TY  ++ G+C+ GR 
Sbjct: 511 ERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRI 570

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A  +  E +  G+TP VVT+NT+ +G  K     +   L   M          +Y+ +
Sbjct: 571 DDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNII 630

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           LNGL K   +  A+ +F+ +     +VD    N ++ G  +K   +    EDA  +F  +
Sbjct: 631 LNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMI-GALLKDGRK----EDAMNLFATI 685

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           +    V D  TY ++   L +    +E         + G  P ++  N +++ L   G I
Sbjct: 686 SANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDI 745

Query: 422 DKA 424
            +A
Sbjct: 746 SRA 748



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 180/397 (45%), Gaps = 8/397 (2%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFF---SEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           G   +V  +N LL      N  E A++     ++       PN  +++ +I  +  +   
Sbjct: 161 GCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQV 220

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            +A  +   M D G  PNV T+TI+++ LCK+  +  A  V  QM   G +PNI TY CL
Sbjct: 221 DKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCL 280

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           + G   +G+ +E   ML  +   GL+PD +TY  ++D  CK G+  EA +L +  I +G+
Sbjct: 281 IHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGI 340

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            P+V  +  + +GY  +G   +    L LM      P+   ++ +     K   I  A+ 
Sbjct: 341 KPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMD 400

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           IF +M + G   +     +L+  LC     +   L+    + E +   + V     YG+ 
Sbjct: 401 IFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLC 460

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
             T+ K +K  E    +   +  G  P  + FN ++  LC EG++ KA  L+ LM     
Sbjct: 461 --TIDKWEKAGELFFEM---VNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGT 515

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            P   SY+ LI     + K+ +A  L    L  G+ P
Sbjct: 516 RPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKP 552



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 185/387 (47%), Gaps = 7/387 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++       + + A   F + +  G+ PN  T++I+I   C       A  V   M 
Sbjct: 207 YNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMI 266

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  PN+ T+T L++     G+ KE + +L +M   G +P+  TY  LL  LC  G+  
Sbjct: 267 DKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCT 326

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA ++  ++   G+KPDV  Y  ++ G+   G  +E    L+  +  G++PN   FN +F
Sbjct: 327 EARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVF 386

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             + K+    + + +   M+++   P+ ++Y+TL++ L K G++  A   F +M+  G  
Sbjct: 387 CAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVA 446

Query: 328 VDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
            +  +  SL+ GLC +  WE+      A ++F +M  +    +   +  ++  L    + 
Sbjct: 447 PNIVVFTSLVYGLCTIDKWEK------AGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRV 500

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +A   +     +G  P  I++N +I+  C  GK D+A  LL +M      P+  +Y+ L
Sbjct: 501 MKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTL 560

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           +    +  +  DA +++   L  G+ P
Sbjct: 561 LHGYCRDGRIDDAYSVFQEMLSNGITP 587



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 188/424 (44%), Gaps = 40/424 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K     E   +FDS+ + G    VS +  +L              F       G++PN +
Sbjct: 321 KKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHY 380

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+I+   +  K    EA  + + M   G  PNV  +  L+++LCK GR+ +A    +QM
Sbjct: 381 IFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQM 440

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL-------------------- 221
              G  PNI  +  L+ GLC + + E+A E+   + N G+                    
Sbjct: 441 INEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRV 500

Query: 222 ---------------KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                          +PD+ +Y A++ G C VG+++EA +LL+  +  G+ PN  T+NTL
Sbjct: 501 MKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTL 560

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +GYC++G       + + M      P  ++Y+T+L+GL K  +   A  ++  M+  G 
Sbjct: 561 LHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGK 620

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           +      N +L GL      + + +++A ++F+ +  K    D  T+ I+I  L K  + 
Sbjct: 621 QWSIYTYNIILNGL-----SKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRK 675

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           ++A+         G +P   T+  + + L  EG +++   +   M +    P+    + L
Sbjct: 676 EDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFL 735

Query: 447 ITKL 450
           + +L
Sbjct: 736 VRRL 739



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 183/400 (45%), Gaps = 5/400 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  +   G   +V  +  ++  L      + A   F +    G+ PN  T++ +I  Y
Sbjct: 225 NLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGY 284

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
            +   + E  +++  M  +G  P+  T+ +L++ LCK G+  EA ++ D M R G KP++
Sbjct: 285 LSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDV 344

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             Y  +L G    G + E +  L  +  +G+ P+ Y +  V   F K     EAM++ N+
Sbjct: 345 SIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNK 404

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             ++G++PNVV + TL +  CK G           M      P+ + +++L+ GL    K
Sbjct: 405 MRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDK 464

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
              A  +F EMV  G   +    N+++  LC +    K     A ++ + M +  +  D 
Sbjct: 465 WEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMK-----AQRLIDLMERVGTRPDI 519

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            +Y  +IR      KTDEA   L   + +G  P   T+N ++   C +G+ID A  +   
Sbjct: 520 ISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQE 579

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           M  +   P   +Y+ ++  L +  +  +A  LY   +  G
Sbjct: 580 MLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSG 619



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 141/314 (44%), Gaps = 16/314 (5%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R ++AQR +D      L ER+         GT   +  +N L+    ++ + + A K   
Sbjct: 499 RVMKAQRLID------LMERV---------GTRPDIISYNALIRGHCLVGKTDEASKLLD 543

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
              S GL PN  T++ ++  YC      +A  V   M  NG  P V T+  +++ L K+ 
Sbjct: 544 IMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTR 603

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           R  EA E+   M   G + +I TYN +L GL     V+EA +M  ++ +  L+ D+ T+ 
Sbjct: 604 RFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFN 663

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++    K GR  +AM L       G+ P+V T+  +     +EG+  +  G+   M+K 
Sbjct: 664 IMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKS 723

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
            C P+ +  + L+  LL  G I  A +   ++    F + E    S+L  L  +   +  
Sbjct: 724 GCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSL-EASTTSMLISLFSREEHQAK 782

Query: 350 LLEDAYQVFEKMTK 363
            L + Y    +  K
Sbjct: 783 SLPEKYHFLNEAKK 796


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 206/410 (50%), Gaps = 13/410 (3%)

Query: 73  FDSIKKDGT---NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           F++ K+ G      S      L++AL+  N        + E     + PN +TF+++I  
Sbjct: 173 FEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINA 232

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK---SGRLKEALEVLDQMGRIGC 186
            C      +AR V++ M   GY PNV ++  L++  CK   +G++ +A  VL +M     
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEV 292

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN+ T+N L+ G      +  + ++   + +  + P+V TY ++++G C  G+ NEA+ 
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIG 352

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           + ++ +  GV PN++T+++L NG+CK G   + + +   +K +   P    Y+ L++   
Sbjct: 353 MRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYC 412

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K GKI    ++ +EM R G   D    N L+ GLC         +E A ++F+++T K  
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN-----IEAAKKLFDQLTNK-G 466

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           + D  T+ I++       ++ +A + L    +MG  PR +T+N +++  C EG +  A  
Sbjct: 467 LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATN 526

Query: 427 LLFLMYEHAKIP-SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +   M +  ++  +  SY++L+    Q  K  DA  L    L++G++P R
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 2/203 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE +D+FDS+K  GT  +   +N L+ A   L + +       E    G+ P+  
Sbjct: 378 KNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVG 437

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C   +   A+K+ D + + G  P++ TF IL+   C  G  ++A  +L +M
Sbjct: 438 TYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEM 496

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-KNDGLKPDVYTYTAVMDGFCKVGR 240
            ++G KP   TYN ++KG C  G ++ A  M   + K   L+ +V +Y  ++ G+ + G+
Sbjct: 497 SKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556

Query: 241 SNEAMELLNEAIERGVTPNVVTF 263
             +A  LLNE +E+G+ PN +T+
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITY 579



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 136/297 (45%), Gaps = 14/297 (4%)

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR---VEEAYEMLMNV 216
           +LV +   + R +   E   + G  G K +  +   L+  L    R   VE  Y+ ++  
Sbjct: 158 MLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRR 217

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK---E 273
           K   ++P+V+T+  V++  CK G+ N+A +++ +    G +PNVV++NTL +GYCK    
Sbjct: 218 K---IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGN 274

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   K   +LK M +    P+  +++ L++G  K   +  ++ +FKEM+      +    
Sbjct: 275 GKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITY 334

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           NSL+ GLC         + +A  + +KM       +  TY  +I    K     EAL   
Sbjct: 335 NSLINGLC-----NGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMF 389

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                 G  P T  +N +I A C  GKID    L   M     +P   +Y+ LI  L
Sbjct: 390 DSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 125/272 (45%), Gaps = 8/272 (2%)

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R E  +E        G K    +   +M    K  RS +   L  E I R + PNV TFN
Sbjct: 168 RFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFN 227

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG---KIRPAVSIFKEM 321
            + N  CK G   K   +++ MK     P+ +SY+TL++G  K G   K+  A ++ KEM
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           V      +    N L+ G     W++ D L  + +VF++M  +  + +  TY  +I  L 
Sbjct: 288 VENEVSPNLTTFNILIDGF----WKD-DNLPGSLKVFKEMLDQDVIPNVITYNSLINGLC 342

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
            G K +EA+      +  G  P  IT++++I   C  G + +AL +   +      P+  
Sbjct: 343 NGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTR 402

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            Y+MLI    +L K  D  AL     ++G++P
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 113/237 (47%), Gaps = 2/237 (0%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E I + D +   G   ++  ++ L+         + A+  F      G  P +  +++
Sbjct: 347 INEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNM 406

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC      +   + + M   G  P+V T+  L+  LC++G ++ A ++ DQ+   G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG 466

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ T++ L++G C  G   +A  +L  +   GLKP   TY  +M G+CK G    A 
Sbjct: 467 L-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAAT 525

Query: 246 ELLNE-AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +  +   ER +  NV ++N L  GY ++G       LL  M ++  +P++I+Y  +
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 2/146 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD +   G    V+ F+ L+       E   A     E S  GL P   T++IM++ YC
Sbjct: 458 LFDQLTNKGLPDLVT-FHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYC 516

Query: 132 NKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
            + +   A  +   M  +     NV ++ +L+    + G+L++A  +L++M   G  PN 
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNV 216
            TY  + + +   G V +    L NV
Sbjct: 577 ITYEIVKEEMVDKGFVPDIEGHLFNV 602


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 201/416 (48%), Gaps = 11/416 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   +++ ++IF  +   G N SV   N +L ++V   E  +   F  E     + P+ 
Sbjct: 134 LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDV 193

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+I+I   C +  F ++  ++  M  +GY P + T+  +++  CK GR K A+E+LD 
Sbjct: 194 ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G   ++ TYN L+  LC   R+ + Y +L +++   + P+  TY  +++GF   G+
Sbjct: 254 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A +LLNE +  G++PN VTFN L +G+  EG   + + +  +M+ +   P ++SY  
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LL+GL K  +   A   +  M R G  V       ++ GLC     +   L++A  +  +
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC-----KNGFLDEAVVLLNE 428

Query: 361 MTKKVSVTDPGTYGIVIR---TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           M+K     D  TY  +I     +G+ K   E +  ++    +G  P  I ++ +I   C 
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY---RVGLSPNGIIYSTLIYNCCR 485

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            G + +A+ +   M          ++++L+T L +  K  +A          G++P
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 205/479 (42%), Gaps = 44/479 (9%)

Query: 35  ASLSTAESLDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLM 93
           AS    E L    +P  +     +D  I     KE + +F  ++  G   S   +  LL 
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF-EARKVIDCMFDNGYH 152
            L    E + A  F+      G+     T++ MI   C KN F  EA  +++ M  +G  
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC-KNGFLDEAVVLLNEMSKDGID 435

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++ T++ L+N  CK GR K A E++ ++ R+G  PN   Y+ L+   C +G ++EA  +
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +  +G   D +T+  ++   CK G+  EA E +      G+ PN V+F+ L NGY  
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G  +K   +   M K    P   +Y +LL GL K G +R A    K +      VD  M
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N+LL  +C KS      L  A  +F +M ++  + D  TY  +I  L +  KT  A++ 
Sbjct: 616 YNTLLTAMC-KSGN----LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 670

Query: 393 LHHA------------------------------------IEMGHIPRTITFNNVIQALC 416
              A                                      +GH P  +T N +I    
Sbjct: 671 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 730

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
             GKI+K   LL  M      P+ T+Y++L+    + +    +  LY + +  G++P +
Sbjct: 731 RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 789



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 98  LNEQETAVKFFSEASSYGLA-PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
           L   +++  F +  ++Y L   N   + I+IR Y  +    ++ ++   M   G++P+V 
Sbjct: 100 LMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY 159

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           T   ++ S+ KSG        L +M +    P++ T+N L+  LC  G  E++  ++  +
Sbjct: 160 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 219

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           +  G  P + TY  V+  +CK GR   A+ELL+    +GV  +V T+N L +  C+    
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            KG  LL+ M+KR   P++++Y+TL+NG    GK+  A  +  EM+ FG   +    N+L
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           + G       E +  ++A ++F  M  K       +YG+++  L K  + D A       
Sbjct: 340 IDG----HISEGN-FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
              G     IT+  +I  LC  G +D+A++LL  M +    P   +Y  LI    ++ + 
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454

Query: 457 YDA----CALYGAALK-QGVI 472
             A    C +Y   L   G+I
Sbjct: 455 KTAKEIVCRIYRVGLSPNGII 475



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 195/474 (41%), Gaps = 66/474 (13%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LKE I I++++  +G       FN L+ +L    +   A +F    +S G+ PN+ +F  
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  Y N  +  +A  V D M   G+HP   T+  L+  LCK G L+EA + L  +  + 
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              +   YN LL  +C  G + +A  +   +    + PD YTYT+++ G C+ G++  A+
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668

Query: 246 ELLNEAIERG------------------------------------VTPNVVTFNTLFNG 269
               EA  RG                                     TP++VT N + +G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           Y + G   K   LL  M  +N  P+  +Y+ LL+G  K   +  +  +++ ++  G   D
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788

Query: 330 ERMMNSLLRGLCMKSWEEKDL------------------------------LEDAYQVFE 359
           +   +SL+ G+C  +  E  L                              +  A+ + +
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            MT      D  T   ++  L +  +  E+ + LH   + G  P +  +  +I  LC  G
Sbjct: 849 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            I  A ++   M  H   P   +   ++  L +  K+ +A  L    LK  ++P
Sbjct: 909 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 962



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/482 (20%), Positives = 193/482 (40%), Gaps = 76/482 (15%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS----- 120
           L E + + + + KDG +  +  ++ L+     +   +TA +        GL+PN      
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 121 ------------------------------WTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
                                         +TF++++   C      EA + + CM  +G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PN  +F  L+N    SG   +A  V D+M ++G  P   TY  LLKGLC  G + EA 
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           + L ++       D   Y  ++   CK G   +A+ L  E ++R + P+  T+ +L +G 
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658

Query: 271 CKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           C++G  +  +   K  + R N LP+K+ Y+  ++G+ K G+ +  +   ++M   G   D
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N+++ G     +     +E    +  +M  +    +  TY I++    K K    +
Sbjct: 719 IVTTNAMIDG-----YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773

Query: 390 LIHLHHAIEMGHIPRTIT-----------------------------------FNNVIQA 414
            +     I  G +P  +T                                   FN +I  
Sbjct: 774 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            C  G+I+ A  L+ +M        + + D +++ L++  +  ++  +     KQG+ P+
Sbjct: 834 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893

Query: 475 RK 476
            +
Sbjct: 894 SR 895



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/404 (23%), Positives = 170/404 (42%), Gaps = 51/404 (12%)

Query: 88   FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            +N LL A+        AV  F E     + P+S+T++ +I   C K      + VI  +F
Sbjct: 616  YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK-----GKTVIAILF 670

Query: 148  DNGYH------PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
                       PN   +T  V+ + K+G+ K  +   +QM  +G  P+I T N ++ G  
Sbjct: 671  AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 730

Query: 202  YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             +G++E+  ++L  + N    P++ TY  ++ G+ K    + +  L    I  G+ P+ +
Sbjct: 731  RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL 790

Query: 262  TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            T ++L  G C+      G+ +LK    R    D+ +++ L++     G+I  A  + K M
Sbjct: 791  TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 850

Query: 322  VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK----------------V 365
               G  +D+   ++++  L           +++  V  +M+K+                 
Sbjct: 851  TSLGISLDKDTCDAMVSVL-----NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905

Query: 366  SVTDPGTYGIV-------------------IRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
             V D  T  +V                   +R L K  K DEA + L   ++M  +P   
Sbjct: 906  RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965

Query: 407  TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            +F  ++   C  G + +AL L  +M          SY++LIT L
Sbjct: 966  SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 120/252 (47%)

Query: 89   NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
            + L++ +   N  E  +K        G+  + +TF+++I   C   +   A  ++  M  
Sbjct: 793  HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852

Query: 149  NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
             G   +  T   +V+ L ++ R +E+  VL +M + G  P  + Y  L+ GLC VG ++ 
Sbjct: 853  LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912

Query: 209  AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
            A+ +   +    + P     +A++    K G+++EA  LL   ++  + P + +F TL +
Sbjct: 913  AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 972

Query: 269  GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
              CK G  ++ + L  +M       D +SY+ L+ GL   G +  A  +++EM   GF  
Sbjct: 973  LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032

Query: 329  DERMMNSLLRGL 340
            +     +L+RGL
Sbjct: 1033 NATTYKALIRGL 1044



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 129/297 (43%), Gaps = 5/297 (1%)

Query: 84   SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
            +++ +N LL       +  T+   +      G+ P+  T   ++   C  N      K++
Sbjct: 753  NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812

Query: 144  DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
                  G   +  TF +L++  C +G +  A +++  M  +G   +  T + ++  L   
Sbjct: 813  KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872

Query: 204  GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
             R +E+  +L  +   G+ P+   Y  +++G C+VG    A  +  E I   + P  V  
Sbjct: 873  HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932

Query: 264  NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
            + +     K G   +   LL+ M K   +P   S++TL++   K G +  A+ +   M  
Sbjct: 933  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992

Query: 324  FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
             G ++D    N L+ GLC K       +  A++++E+M     + +  TY  +IR L
Sbjct: 993  CGLKLDLVSYNVLITGLCAKGD-----MALAFELYEEMKGDGFLANATTYKALIRGL 1044



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 116/268 (43%), Gaps = 3/268 (1%)

Query: 88   FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            FN L+       E   A       +S G++ +  T   M+      + F E+R V+  M 
Sbjct: 827  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886

Query: 148  DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRV 206
              G  P    +  L+N LC+ G +K A  V ++M     C PN+   + +++ L   G+ 
Sbjct: 887  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKA 945

Query: 207  EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            +EA  +L  +    L P + ++T +M   CK G   EA+EL       G+  ++V++N L
Sbjct: 946  DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1005

Query: 267  FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL-KWGKIRPAVSIFKEMVRFG 325
              G C +G       L + MK    L +  +Y  L+ GLL +      A  I K+++  G
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARG 1065

Query: 326  FEVDERMMNSLLRGLCMKSWEEKDLLED 353
            F     +     R L M   + K L  D
Sbjct: 1066 FITSMSLSQDSHRNLKMAMEKLKALQND 1093



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 4/166 (2%)

Query: 72   IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY- 130
            +   + K G +     +  L+  L  + + +TA     E  ++ + P +   S M+R   
Sbjct: 881  VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 940

Query: 131  -CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
             C K D  EA  ++  M      P + +FT L++  CK+G + EALE+   M   G K +
Sbjct: 941  KCGKAD--EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998

Query: 190  IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            + +YN L+ GLC  G +  A+E+   +K DG   +  TY A++ G 
Sbjct: 999  LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 177/357 (49%), Gaps = 5/357 (1%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           APN +TF+I+I   C + +  EAR +   M   G  P+V T+  L++   K G L+E   
Sbjct: 196 APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVEL 255

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           ++ +M + GC  ++ TYN L+      G +E+AY     +K  G+  +V T +  +D FC
Sbjct: 256 LVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFC 315

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G   EAM+L  +   RG+ PN  T+ +L +G CK G     + LL  M  +  +P+ +
Sbjct: 316 KEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 375

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y+ +++GL K GK+  A  +   M R G + +E +  +L+ G  M    E+     A  
Sbjct: 376 TYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSER-----ALD 430

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +  +M  K    D   YG +I  L K +K DEA   LH   + G  P T+ +  ++ A  
Sbjct: 431 LLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFF 490

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             GK  +A+ LL  + +    P+  +Y  LI  L +    Y+A + +    + G+ P
Sbjct: 491 KAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDP 547



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 180/376 (47%), Gaps = 8/376 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  FN ++  L    E   A   F    + G +P+  T++ +I  Y    +  E   ++
Sbjct: 198 NVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLV 257

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M  +G   +V T+  L+N   K G +++A     +M R+G   N+ T +  +   C  
Sbjct: 258 SEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKE 317

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G V EA ++   ++  G+ P+ +TYT+++DG CK GR ++A+ LL+E + +G+ PNVVT+
Sbjct: 318 GLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 377

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             + +G CKEG       +L LM++     +++ Y+TL++G         A+ +  EM  
Sbjct: 378 TVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKN 437

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E+D  +  +L+ GLC     +   L++A  +  KM       +   Y  ++    K 
Sbjct: 438 KGMELDVSLYGTLIWGLC-----KVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKA 492

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            K  EA+  LH   + G  P  +T+  +I  LC  G I +A+     M E    P+   Y
Sbjct: 493 GKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVY 552

Query: 444 DMLI---TKLDQLEKS 456
             LI    K+  L K+
Sbjct: 553 TTLIDGFCKIGSLSKA 568



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 185/436 (42%), Gaps = 40/436 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   +   ++K G    V  +N L+         E A  +F E    G+  N  
Sbjct: 246 KCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVV 305

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T S  +  +C +    EA K+   M   G  PN  T+T LV+  CK+GRL +A+ +LD+M
Sbjct: 306 TLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 365

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRV----------------------------------- 206
              G  PN+ TY  ++ GLC  G+V                                   
Sbjct: 366 VHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNS 425

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           E A ++L  +KN G++ DV  Y  ++ G CKV + +EA  LL++  + G+ PN V + T+
Sbjct: 426 ERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTI 485

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            + + K G   + V LL  +      P+ ++Y  L++GL K G I  A+S F +M   G 
Sbjct: 486 MDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGL 545

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + + ++  +L+ G C     +   L  A  +  +M  K    D   Y  +I    K    
Sbjct: 546 DPNVQVYTTLIDGFC-----KIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDL 600

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
             A       IE G       +   I   C    + +A  +L  M      P +T+Y+ L
Sbjct: 601 QGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCL 660

Query: 447 ITKLDQLEKSYDACAL 462
           I K  +L    +A +L
Sbjct: 661 IRKYQKLGNMEEASSL 676



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 123/252 (48%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D+ + +K  G    VS +  L+  L  + + + A     +    GL PN+  ++ ++  
Sbjct: 429 LDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDA 488

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +       EA  ++  + D+G  PNV T+  L++ LCK+G + EA+   D+M  +G  PN
Sbjct: 489 FFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPN 548

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           +Q Y  L+ G C +G + +A  ++  + + G+  D   YT+++DG  K G    A  L  
Sbjct: 549 VQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKA 608

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           + IE G+  ++  +    +G+C      +  G+L  M      PDK +Y+ L+    K G
Sbjct: 609 KMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLG 668

Query: 310 KIRPAVSIFKEM 321
            +  A S+  EM
Sbjct: 669 NMEEASSLQNEM 680



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 82/189 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA    E + +   I   G   +V  +  L+  L        A+  F +    GL PN  
Sbjct: 491 KAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQ 550

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  +C      +A  +++ M D G   +   +T L++   K G L+ A  +  +M
Sbjct: 551 VYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKM 610

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + ++  Y C + G C +  ++EA  +L  +   G+ PD   Y  ++  + K+G  
Sbjct: 611 IETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNM 670

Query: 242 NEAMELLNE 250
            EA  L NE
Sbjct: 671 EEASSLQNE 679



 Score = 38.9 bits (89), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 25/120 (20%), Positives = 52/120 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L + + + + +   G +     +  L+   +   + + A    ++    GL  + +
Sbjct: 561 KIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLY 620

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++  I  +CN N   EAR V+  M   G  P+ T +  L+    K G ++EA  + ++M
Sbjct: 621 CYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 198/407 (48%), Gaps = 5/407 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +   D +   G   +   +  L+  +  + +   A+K   +       PN   +S 
Sbjct: 145 VKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYST 204

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G   +V T++ L+   C  G+LKEA+ +L++M    
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ TYN L+  LC  G+V+EA  +L  +    +KPDV TY+ +MDG+  V    +A 
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + N     GVTP+V T+  L NG+CK     + + L K M ++N +P  ++YS+L++GL
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I     +  EM   G   D    +SL+ GLC         L+ A  +F KM  + 
Sbjct: 385 CKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGH-----LDRAIALFNKMKDQE 439

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  T+ I++  L KG +  +A       +  G+     T+N +I   C +G +++AL
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            +L  M ++  IP+  +++ +I  L + +++  A  L    + +G++
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 190/422 (45%), Gaps = 42/422 (9%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  FN +L +   +    TAV         G+ P+  T +I+I C+C+         V+ 
Sbjct: 59  IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM----------------------- 181
            +   GY P+  T   L+  LC  G++K+AL   D++                       
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178

Query: 182 -------------GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
                        GR+  KPN++ Y+ ++  LC    V EAY +   +   G+  DV TY
Sbjct: 179 DTRGAIKLLRKIDGRL-TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTY 237

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           + ++ GFC  G+  EA+ LLNE + + + PNV T+N L +  CKEG   +   +L +M K
Sbjct: 238 STLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLK 297

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
               PD I+YSTL++G     +++ A  +F  M   G   D      L+ G C     + 
Sbjct: 298 ACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC-----KN 352

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
            ++++A  +F++M +K  V    TY  +I  L K  +       +    + G     IT+
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITY 412

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           +++I  LC  G +D+A+ L   M +    P+  ++ +L+  L +  +  DA  ++   L 
Sbjct: 413 SSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLT 472

Query: 469 QG 470
           +G
Sbjct: 473 KG 474



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 144/280 (51%), Gaps = 1/280 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        VD + K   +KE   +   + K      V  ++ L+    ++ E + A  
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQH 325

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F+  S  G+ P+  T++I+I  +C      EA  +   M      P + T++ L++ LC
Sbjct: 326 VFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC 385

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSGR+    +++D+M   G   ++ TY+ L+ GLC  G ++ A  +   +K+  ++P+++
Sbjct: 386 KSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIF 445

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+T ++DG CK GR  +A E+  + + +G   NV T+N + NG+CK+G   + + +L  M
Sbjct: 446 TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKM 505

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
           +   C+P+  ++ T++  L K  +   A  + ++M+  G 
Sbjct: 506 EDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 113/262 (43%), Gaps = 30/262 (11%)

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A+   N  +    TP ++ FN + + + K       V L   ++ +   PD I+ + L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK------DLLEDAY 355
           +N     G+I    S+  ++++ G+  D   +N+L++GLC+K   +K       LL   +
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 356 QVFE--------------------KMTKKVS--VTDPGT--YGIVIRTLGKGKKTDEALI 391
           Q+ +                    K+ +K+   +T P    Y  +I  L K +   EA  
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
                   G     +T++ +I   C EGK+ +A+ LL  M      P+  +Y++L+  L 
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           +  K  +A ++    LK  V P
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKP 302


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 192/402 (47%), Gaps = 5/402 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +++ + K     S+  FN ++  L    + + A  F      YG+ PN  T++ +I  YC
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +  F  A K+   M D    P+  T+   ++ LCK  R++EA  VL ++   G  PN  
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G C  G +++A+     + N G+   V+TY  ++       R  EA +++ E 
Sbjct: 324 TYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM 383

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            E+GV P+VVT+N   NGYC+ G   K + L   M ++N  P   +Y++L++   K  ++
Sbjct: 384 REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRM 443

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A   FK+ ++ G   D  M N+L+ G C+        ++ A+Q+ ++M     V D  
Sbjct: 444 SEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGN-----IDRAFQLLKEMDNAKVVPDEV 498

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           T+  +++   + +K +EA   L    E G  P  I++N +I      G +  AL +   M
Sbjct: 499 TFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEM 558

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                 P+  +Y+ LI    ++ ++  A  L      +G+ P
Sbjct: 559 LSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITP 600



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 154/322 (47%), Gaps = 5/322 (1%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           ++ TF I++N LC+ G+ K+A + +  M   G KPN+ TYN ++ G C  G+ E A ++ 
Sbjct: 216 SIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIF 275

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +K+  LKPD YTY + +   CK  R  EA  +L + +E G+ PN VT+N L +G C +
Sbjct: 276 KTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNK 335

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   K       M  R  +    +Y+ L++ L    +I  A  + KEM   G E D    
Sbjct: 336 GDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTY 395

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           N  + G C     +K     A  +F++M +K       TY  +I   GK  +  EA    
Sbjct: 396 NIQINGYCRCGNAKK-----ALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKF 450

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
             +I+ G +P  I FN +I   C  G ID+A  LL  M     +P   +++ L+    + 
Sbjct: 451 KKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRE 510

Query: 454 EKSYDACALYGAALKQGVIPQR 475
            K  +A  L     ++G+ P  
Sbjct: 511 RKVEEAKKLLDEMKERGIKPDH 532



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 172/361 (47%), Gaps = 10/361 (2%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFND 90
           F AAS       D    P       F+ R+ K   ++E   +   + + G   +   +N 
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+       + + A  +  E  + G+  + +T++++I     +    EA  +I  M + G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             P+V T+ I +N  C+ G  K+AL + D+M     +P ++TY  L+       R+ EA 
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E       +G+ PD+  + A++DG C  G  + A +LL E     V P+ VTFNTL  GY
Sbjct: 448 EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGY 507

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+E    +   LL  MK+R   PD ISY+TL++G  K G ++ A+ +F EM+  GF+   
Sbjct: 508 CRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTL 567

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N+L++G     + +    + A ++  +M  K    D  TY  VI  +    KT++ L
Sbjct: 568 LTYNALIQG-----YSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM----KTNDDL 618

Query: 391 I 391
           +
Sbjct: 619 V 619



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 40/249 (16%)

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK------------------------ 295
            + F+ L + YC+   P + +  L LMK+   +P                          
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 296 -----------ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
                      ++++ ++N L + GK + A      M  +G + +    N+++ G C++ 
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
                  E A ++F+ M  K    D  TY   I  L K ++ +EA   L   +E G +P 
Sbjct: 267 K-----FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPN 321

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            +T+N +I   C +G +DKA      M     + S  +Y++LI  L   ++  +A  +  
Sbjct: 322 AVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIK 381

Query: 465 AALKQGVIP 473
              ++GV P
Sbjct: 382 EMREKGVEP 390


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 191/397 (48%), Gaps = 10/397 (2%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           K D T  S+  +N+LL  L      +   + ++E     ++ + +TF++MI  YC     
Sbjct: 149 KDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFV 208

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            EA++ +  M   G  P+  T T  +   C+S  +  A  V ++M       N  +YN L
Sbjct: 209 KEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPN----RNEVSYNQL 264

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           + GLC  GR++EA  + + +K+D   P+VYTYTA++ G C+    ++AM LL+E +ER +
Sbjct: 265 IHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNL 323

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            P+++T+N+L  G C+ G       LL LMK+R  +PD+ +Y   ++ L K  ++  A  
Sbjct: 324 VPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARR 383

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           +F  +   G   +  M + L+ G C     +   +++A  +FEKM  K    +  T+  +
Sbjct: 384 LFDSLTEEGVSANVIMYSVLIDGYC-----KVGKVDEAGCLFEKMLSKNCSPNAYTFNAL 438

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I  L       EAL      ++MG  P   TFN +I  +  +G  D A   L  M    +
Sbjct: 439 IHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE 498

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            P   +Y+  I       K  +A  +     ++GV P
Sbjct: 499 KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPP 535



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 169/349 (48%), Gaps = 10/349 (2%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           ++A + F E  +     N  +++ +I   C      EA  +   M D+  +PNV T+T L
Sbjct: 244 DSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTAL 299

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +  LC+   + +A+ +LD+M      P++ TYN L+ G C  G ++ AY +L  +K  GL
Sbjct: 300 IKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGL 358

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PD  TY   +D  CK  R  EA  L +   E GV+ NV+ ++ L +GYCK G   +   
Sbjct: 359 VPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGC 418

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L + M  +NC P+  +++ L++GL   G ++ A+S+F +MV+ G +      N L+ G  
Sbjct: 419 LFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILI-GRM 477

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
           +K  +     +DA++  +KM          TY   I       K  EA   +    E G 
Sbjct: 478 LKQGD----FDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGV 533

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            P   T+ ++I+A    G    A  +L  M++    PS  ++  LI +L
Sbjct: 534 PPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQL 582



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 168/388 (43%), Gaps = 13/388 (3%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+         ++A +  S     GL P+  T+   I   C  N   EAR++ D + 
Sbjct: 330 YNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLT 389

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G   NV  +++L++  CK G++ EA  + ++M    C PN  T+N L+ GLC  G ++
Sbjct: 390 EEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLK 449

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  +   +   GLKP VYT+  ++    K G  ++A + L + +  G  P   T+N   
Sbjct: 450 EALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFI 509

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             YC  G   +   ++  MK+    PD  +Y++L+    K G    A  + K M     E
Sbjct: 510 EVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCE 569

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                  SL++ L  K +           V EK + +  V     +G V  +        
Sbjct: 570 PSHHTFLSLIKQLFDKRY-----------VVEK-SGETGVESVSNFGDVPGSNMWKMMEF 617

Query: 388 EALIHLHHAIE-MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           + +I L   +E  G  P +  +  +I  +C    +  AL LL  M +    PS   ++ +
Sbjct: 618 DIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAV 677

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQ 474
           I+   +L+K  +A  +    +  G  PQ
Sbjct: 678 ISCCCKLQKYGEAANIVEDMICSGHSPQ 705



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 159/329 (48%), Gaps = 32/329 (9%)

Query: 57  FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           F+D + K++ ++E   +FDS+ ++G + +V  ++ L+     + + + A   F +  S  
Sbjct: 368 FIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKN 427

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
            +PN++TF+ +I   C+  +  EA  + D M   G  P V TF IL+  + K G   +A 
Sbjct: 428 CSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAH 487

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           + L +M   G KP  +TYN  ++  C  G+V+EA +M++ +K +G+ PD +TYT+++  +
Sbjct: 488 KCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAY 547

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG-----YCKEGTPMKGV---------- 280
            K+G +  A ++L    +    P+  TF +L        Y  E +   GV          
Sbjct: 548 GKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVP 607

Query: 281 --------------GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
                          L + M+K  C PD   Y  L++G+ K   +  A+ +  +M + G 
Sbjct: 608 GSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGI 667

Query: 327 EVDERMMNSLLRGLC--MKSWEEKDLLED 353
              E + N+++   C   K  E  +++ED
Sbjct: 668 SPSEMVFNAVISCCCKLQKYGEAANIVED 696



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 151/347 (43%), Gaps = 34/347 (9%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  LKE + +FD + K G   +V  FN L+  ++   + + A K   +  S G  P + T
Sbjct: 445 AGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVART 504

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++  I  YC+     EA  ++  M + G  P+  T+T L+ +  K G    A +VL  M 
Sbjct: 505 YNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMF 564

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEE-----------------------------AYEML 213
              C+P+  T+  L+K L     V E                               E+ 
Sbjct: 565 DADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELF 624

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             ++  G  PD   Y  ++ G CKV     A++LL++  + G++P+ + FN + +  CK 
Sbjct: 625 EEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKL 684

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
               +   +++ M      P      TL+ GL + G+     S+FK++   G+  DE   
Sbjct: 685 QKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAW 744

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
             L+ G+      ++ L+E+  Q+FE+M K      P TY I+ + L
Sbjct: 745 KILIDGML-----KQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786


>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
          Length = 458

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 197/413 (47%), Gaps = 21/413 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           + D +   G   S+  FN  L   V  +    AV  F+  +  G   + P+  T+SI+I 
Sbjct: 45  VLDELPLRGWGASIYSFNRTLTD-VARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIG 103

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
           C C           +  +   G+     TF  L+  LC   R  +A++ VL +M  + C 
Sbjct: 104 CCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCM 163

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---GLKPDVYTYTAVMDGFCKVGRSNEA 244
           P++ +   LLKGLC   R +EA E+L  + +D   G  PDV +YT V++GF K G S++A
Sbjct: 164 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 223

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
               +E + R ++PNVVT++++    CK     K + +L  M K   +PD ++YS++L+G
Sbjct: 224 YSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHG 283

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
               G+ +  +    +M   G E +     SL+  LC      K     A ++F+ MTK+
Sbjct: 284 YCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTK-----ARKIFDSMTKR 338

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGK 420
               D  TY    RTL +G  T  AL+ +H  +++    G  P    FN +I A   + K
Sbjct: 339 GLEPDIATY----RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 394

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +D+A+L+   M +H   P+   Y  +I  L +     DA   +   + +G+ P
Sbjct: 395 VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 447



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 97/200 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + + +++ +++ K+G       ++ +L       + +  +   ++  S G+ PN  
Sbjct: 251 KAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVV 310

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  ++   C      +ARK+ D M   G  P++ T+  L+      G L E   +LD M
Sbjct: 311 TYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM 370

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G +P+   +N L+       +V++A  +   ++  GL P+V  Y  V+D  CK G  
Sbjct: 371 VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSV 430

Query: 242 NEAMELLNEAIERGVTPNVV 261
           ++AM    + I+ G+TPN++
Sbjct: 431 DDAMLYFEQMIDEGLTPNII 450


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 173/370 (46%), Gaps = 8/370 (2%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           + G    +  ++DL+  L  + E   A  F+      G+ P +  F++++R         
Sbjct: 203 RRGIRVPMPAWSDLMNRLPSVPE---AYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLA 259

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
            AR V D M   G  P V TF  L++ +CK+  L  A  +   M + G  P++ TY   +
Sbjct: 260 SARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFI 319

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
           +GLC  GR+++A EM   +   GL P+    T ++D  CK G     +EL  E   RGV 
Sbjct: 320 QGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVK 379

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
            ++V +N L NG+C+         +++ M+K    PDK++Y+TL++G  K G++  A+ +
Sbjct: 380 ADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEM 439

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
            +EM   G  +D+    +L+ GL            DA ++  +M +     D  TY +VI
Sbjct: 440 KQEMSDEGVALDDVTYTALISGLSKAGRS-----VDAERILCEMMEAGLQPDNTTYTMVI 494

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               K         HL      G  P  +T+N V+   C  G++  A +LL  M      
Sbjct: 495 DAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVC 554

Query: 438 PSRTSYDMLI 447
           P+  +Y++L+
Sbjct: 555 PNDITYNILL 564



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 167/380 (43%), Gaps = 41/380 (10%)

Query: 43  LDLKENPRSLQAQRFV-DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
           LD    P + Q    + D I++  L    ++FD + + G   +V  FN L+  +   ++ 
Sbjct: 234 LDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDL 293

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
             A       +  G+AP+ +T+   I+  C      +A ++ + M + G +PN    T L
Sbjct: 294 NNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTL 353

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +++ CK G +   LE+  +M   G K ++  YN L+ G C V  ++ A +++  ++ DGL
Sbjct: 354 IDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGL 413

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           KPD  TYT ++DG CK G  + AME+  E  + GV  + VT+  L +G  K G  +    
Sbjct: 414 KPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAER 473

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +L  M +    PD  +Y+ +++   K G ++      KEM   G        N ++ G C
Sbjct: 474 ILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFC 533

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                                                +LG+ K  D   + L+  + +G 
Sbjct: 534 -------------------------------------SLGQMKNAD---MLLNAMLNIGV 553

Query: 402 IPRTITFNNVIQALCGEGKI 421
            P  IT+N ++   C  GK+
Sbjct: 554 CPNDITYNILLDGHCKHGKV 573



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 5/268 (1%)

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           V EAY   +++ + G+ P+   +  +M    + G+   A  + +E + RGV P VVTFNT
Sbjct: 223 VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 282

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G CK         L  LM K    PD  +Y   + GL K G+I+ A+ +F+EM   G
Sbjct: 283 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 342

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              +  ++ +L+   C    +E D+       +E  T+ V   D   Y  ++    + + 
Sbjct: 343 LNPNTVVLTTLIDAHC----KEGDVTAGLELRWEMATRGVKA-DLVAYNALVNGFCRVRD 397

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
              A   +    + G  P  +T+  +I   C EG++D A+ +   M +        +Y  
Sbjct: 398 MKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTA 457

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           LI+ L +  +S DA  +    ++ G+ P
Sbjct: 458 LISGLSKAGRSVDAERILCEMMEAGLQP 485



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 8/247 (3%)

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           +AV   +   G   +   LL  A+ RG+   +  ++ L N       P      L L+  
Sbjct: 179 SAVAKVYADEGLLPDGCSLLLLALRRGIRVPMPAWSDLMNRL--PSVPEAYAFYLHLLDA 236

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
               P+   ++ L+  +++ GK+  A ++F EM+R G +      N+L+ G+C  S    
Sbjct: 237 -GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD--- 292

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             L +A  +   M K     D  TYG  I+ L K  +  +A+       E G  P T+  
Sbjct: 293 --LNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVL 350

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
             +I A C EG +   L L + M          +Y+ L+    ++     A  +     K
Sbjct: 351 TTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRK 410

Query: 469 QGVIPQR 475
            G+ P +
Sbjct: 411 DGLKPDK 417


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 202/422 (47%), Gaps = 11/422 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   +++ ++IF  +   G N SV   N +L ++V   E  +   F  E     + P+ 
Sbjct: 174 LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDV 233

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+I+I   C +  F ++  ++  M  +GY P + T+  +++  CK GR K A+E+LD 
Sbjct: 234 ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 293

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G   ++ TYN L+  LC   R+ + Y +L +++   + P+  TY  +++GF   G+
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A +LLNE +  G++PN VTFN L +G+  EG   + + +  +M+ +   P ++SY  
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LL+GL K  +   A   +  M R G  V       ++ GLC     +   L++A  +  +
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC-----KNGFLDEAVVLLNE 468

Query: 361 MTKKVSVTDPGTYGIVIR---TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           M+K     D  TY  +I     +G+ K   E +  ++    +G  P  I ++ +I   C 
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY---RVGLSPNGIIYSTLIYNCCR 525

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
            G + +A+ +   M          ++++L+T L +  K  +A          G++P    
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585

Query: 478 QD 479
            D
Sbjct: 586 FD 587



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 203/473 (42%), Gaps = 44/473 (9%)

Query: 41  ESLDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E L    +P  +     +D  I     KE + +F  ++  G   S   +  LL  L    
Sbjct: 363 EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 422

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF-EARKVIDCMFDNGYHPNVTTF 158
           E + A  F+      G+     T++ MI   C KN F  EA  +++ M  +G  P++ T+
Sbjct: 423 EFDLARGFYMRMKRNGVCVGRITYTGMIDGLC-KNGFLDEAVVLLNEMSKDGIDPDIVTY 481

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
           + L+N  CK GR K A E++ ++ R+G  PN   Y+ L+   C +G ++EA  +   +  
Sbjct: 482 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 541

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +G   D +T+  ++   CK G+  EA E +      G+ PN V+F+ L NGY   G  +K
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              +   M K    P   +Y +LL GL K G +R A    K +      VD  M N+LL 
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA-- 396
            +C KS      L  A  +F +M ++  + D  TY  +I  L +  KT  A++    A  
Sbjct: 662 AMC-KSGN----LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 716

Query: 397 ----------------------------------IEMGHIPRTITFNNVIQALCGEGKID 422
                                               +GH P  +T N +I      GKI+
Sbjct: 717 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 776

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           K   LL  M      P+ T+Y++L+    + +    +  LY + +  G++P +
Sbjct: 777 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 829



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 98  LNEQETAVKFFSEASSYGLA-PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
           L   +++  F +  ++Y L   N   + I+IR Y  +    ++ ++   M   G++P+V 
Sbjct: 140 LMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY 199

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           T   ++ S+ KSG        L +M +    P++ T+N L+  LC  G  E++  ++  +
Sbjct: 200 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 259

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           +  G  P + TY  V+  +CK GR   A+ELL+    +GV  +V T+N L +  C+    
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            KG  LL+ M+KR   P++++Y+TL+NG    GK+  A  +  EM+ FG   +    N+L
Sbjct: 320 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 379

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           + G       E +  ++A ++F  M  K       +YG+++  L K  + D A       
Sbjct: 380 IDG----HISEGN-FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
              G     IT+  +I  LC  G +D+A++LL  M +    P   +Y  LI    ++ + 
Sbjct: 435 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494

Query: 457 YDA----CALYGAALK-QGVI 472
             A    C +Y   L   G+I
Sbjct: 495 KTAKEIVCRIYRVGLSPNGII 515



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 195/474 (41%), Gaps = 66/474 (13%)

Query: 66   LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            LKE I I++++  +G       FN L+ +L    +   A +F    +S G+ PN+ +F  
Sbjct: 529  LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588

Query: 126  MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +I  Y N  +  +A  V D M   G+HP   T+  L+  LCK G L+EA + L  +  + 
Sbjct: 589  LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648

Query: 186  CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
               +   YN LL  +C  G + +A  +   +    + PD YTYT+++ G C+ G++  A+
Sbjct: 649  AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708

Query: 246  ELLNEAIERG------------------------------------VTPNVVTFNTLFNG 269
                EA  RG                                     TP++VT N + +G
Sbjct: 709  LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768

Query: 270  YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            Y + G   K   LL  M  +N  P+  +Y+ LL+G  K   +  +  +++ ++  G   D
Sbjct: 769  YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828

Query: 330  ERMMNSLLRGLCMKSWEEKDL------------------------------LEDAYQVFE 359
            +   +SL+ G+C  +  E  L                              +  A+ + +
Sbjct: 829  KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 888

Query: 360  KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
             MT      D  T   ++  L +  +  E+ + LH   + G  P +  +  +I  LC  G
Sbjct: 889  VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 948

Query: 420  KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             I  A ++   M  H   P   +   ++  L +  K+ +A  L    LK  ++P
Sbjct: 949  DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 1002



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/482 (20%), Positives = 193/482 (40%), Gaps = 76/482 (15%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS----- 120
           L E + + + + KDG +  +  ++ L+     +   +TA +        GL+PN      
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518

Query: 121 ------------------------------WTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
                                         +TF++++   C      EA + + CM  +G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PN  +F  L+N    SG   +A  V D+M ++G  P   TY  LLKGLC  G + EA 
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           + L ++       D   Y  ++   CK G   +A+ L  E ++R + P+  T+ +L +G 
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698

Query: 271 CKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           C++G  +  +   K  + R N LP+K+ Y+  ++G+ K G+ +  +   ++M   G   D
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N+++ G     +     +E    +  +M  +    +  TY I++    K K    +
Sbjct: 759 IVTTNAMIDG-----YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813

Query: 390 LIHLHHAIEMGHIPRTIT-----------------------------------FNNVIQA 414
            +     I  G +P  +T                                   FN +I  
Sbjct: 814 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 873

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            C  G+I+ A  L+ +M        + + D +++ L++  +  ++  +     KQG+ P+
Sbjct: 874 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 933

Query: 475 RK 476
            +
Sbjct: 934 SR 935



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/404 (23%), Positives = 170/404 (42%), Gaps = 51/404 (12%)

Query: 88   FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            +N LL A+        AV  F E     + P+S+T++ +I   C K      + VI  +F
Sbjct: 656  YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK-----GKTVIAILF 710

Query: 148  D------NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
                       PN   +T  V+ + K+G+ K  +   +QM  +G  P+I T N ++ G  
Sbjct: 711  AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 770

Query: 202  YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             +G++E+  ++L  + N    P++ TY  ++ G+ K    + +  L    I  G+ P+ +
Sbjct: 771  RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL 830

Query: 262  TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            T ++L  G C+      G+ +LK    R    D+ +++ L++     G+I  A  + K M
Sbjct: 831  TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 890

Query: 322  VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK----------------V 365
               G  +D+   ++++  L           +++  V  +M+K+                 
Sbjct: 891  TSLGISLDKDTCDAMVSVL-----NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 945

Query: 366  SVTDPGTYGIV-------------------IRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
             V D  T  +V                   +R L K  K DEA + L   ++M  +P   
Sbjct: 946  RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 1005

Query: 407  TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            +F  ++   C  G + +AL L  +M          SY++LIT L
Sbjct: 1006 SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1049



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 120/252 (47%)

Query: 89   NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
            + L++ +   N  E  +K        G+  + +TF+++I   C   +   A  ++  M  
Sbjct: 833  HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 892

Query: 149  NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
             G   +  T   +V+ L ++ R +E+  VL +M + G  P  + Y  L+ GLC VG ++ 
Sbjct: 893  LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952

Query: 209  AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
            A+ +   +    + P     +A++    K G+++EA  LL   ++  + P + +F TL +
Sbjct: 953  AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 1012

Query: 269  GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
              CK G  ++ + L  +M       D +SY+ L+ GL   G +  A  +++EM   GF  
Sbjct: 1013 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1072

Query: 329  DERMMNSLLRGL 340
            +     +L+RGL
Sbjct: 1073 NATTYKALIRGL 1084



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 129/297 (43%), Gaps = 5/297 (1%)

Query: 84   SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
            +++ +N LL       +  T+   +      G+ P+  T   ++   C  N      K++
Sbjct: 793  NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 852

Query: 144  DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
                  G   +  TF +L++  C +G +  A +++  M  +G   +  T + ++  L   
Sbjct: 853  KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 912

Query: 204  GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
             R +E+  +L  +   G+ P+   Y  +++G C+VG    A  +  E I   + P  V  
Sbjct: 913  HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 972

Query: 264  NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
            + +     K G   +   LL+ M K   +P   S++TL++   K G +  A+ +   M  
Sbjct: 973  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 1032

Query: 324  FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
             G ++D    N L+ GLC K       +  A++++E+M     + +  TY  +IR L
Sbjct: 1033 CGLKLDLVSYNVLITGLCAKGD-----MALAFELYEEMKGDGFLANATTYKALIRGL 1084



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 3/241 (1%)

Query: 88   FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            FN L+       E   A       +S G++ +  T   M+      + F E+R V+  M 
Sbjct: 867  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926

Query: 148  DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRV 206
              G  P    +  L+N LC+ G +K A  V ++M     C PN+   + +++ L   G+ 
Sbjct: 927  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKA 985

Query: 207  EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            +EA  +L  +    L P + ++T +M   CK G   EA+EL       G+  ++V++N L
Sbjct: 986  DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1045

Query: 267  FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL-KWGKIRPAVSIFKEMVRFG 325
              G C +G       L + MK    L +  +Y  L+ GLL +      A  I K+++  G
Sbjct: 1046 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARG 1105

Query: 326  F 326
            F
Sbjct: 1106 F 1106



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 4/166 (2%)

Query: 72   IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY- 130
            +   + K G +     +  L+  L  + + +TA     E  ++ + P +   S M+R   
Sbjct: 921  VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 980

Query: 131  -CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
             C K D  EA  ++  M      P + +FT L++  CK+G + EALE+   M   G K +
Sbjct: 981  KCGKAD--EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 1038

Query: 190  IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            + +YN L+ GLC  G +  A+E+   +K DG   +  TY A++ G 
Sbjct: 1039 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 191/387 (49%), Gaps = 18/387 (4%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   + + ++ F  +   G N SV   N LL  LV   +      FF E  +  + P+ 
Sbjct: 109 LREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDV 168

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+I+I   C +    +A  ++  M ++GY P+V T+  ++N  CK GR K ALE++DQ
Sbjct: 169 STFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQ 228

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           MG  G + +  TYN L+  LC   R  + Y +L  ++   + P+  TY ++++GF K G+
Sbjct: 229 MGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGK 288

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A  +  E     + PN VT+N L +G+C +G   + + +L++M+     P+++SYS 
Sbjct: 289 IGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSA 348

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LLNGL +  K   + SI + M   G  V      +++ GLC        LL ++ ++ +K
Sbjct: 349 LLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLC-----RNGLLNESVKLLDK 403

Query: 361 MTKKVSVTDPGTYGIVIR---TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           M K   V D  T+ ++I     +GK K   E +  ++ A   G  P +I +  +I   C 
Sbjct: 404 MLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKA---GLAPNSIIYTTLIYNYCK 460

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYD 444
            G + +A  +   M       SR  YD
Sbjct: 461 TGDVVEAFKVYVAM-------SRIGYD 480



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 192/412 (46%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    K  +++ D +   G       +N L+  L   N          +     ++PN  
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +  +     A ++   M      PN  T+  L++  C  G  ++AL +L+ M
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KPN  +Y+ LL GLC   + E +  +L  ++ +G+      YTA++DG C+ G  
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           NE+++LL++ ++ GV P+VVTF+ L NG+C+ G       ++  M K    P+ I Y+TL
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTL 454

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +    K G +  A  ++  M R G++ +  + N L+  LC     +   +  A   F  M
Sbjct: 455 IYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLC-----KDGKVGVAEYFFHHM 509

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           +K  +V +  T+  +I   G      +A       I+ GH P   T+  +++ALC  GK 
Sbjct: 510 SKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKF 569

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +A  LL  ++         +Y+ ++ +  +     DA AL+   +++ V+P
Sbjct: 570 KEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLP 621



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 9/353 (2%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N   F ++IR Y  +    +A +    M   G++P+V T  +L+  L K  ++       
Sbjct: 97  NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            +M      P++ T+N L+  LC  G++++A  +L  ++  G  P V TY  V++ +CK 
Sbjct: 157 KEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKK 216

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           GR   A+EL+++   +G+  +  T+N L +  CK     KG  LLK M+KR   P++I+Y
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITY 276

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           ++++NG +K GKI  A  IF+EM       +    N+L+ G C          E A  + 
Sbjct: 277 NSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHC-----HDGNFEQALTIL 331

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           E M       +  +Y  ++  L +  K + +   L      G I   I +  +I  LC  
Sbjct: 332 EMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRN 391

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA----CALYGAAL 467
           G +++++ LL  M +   +P   ++ +LI    ++ K  +     C +Y A L
Sbjct: 392 GLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGL 444



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 184/428 (42%), Gaps = 35/428 (8%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E + + D + KDG    V  F+ L+     + + +   +   +    GLAPNS  ++ 
Sbjct: 394 LNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTT 453

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC   D  EA KV   M   GY  N     +LV+SLCK G++  A      M +IG
Sbjct: 454 LIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIG 513

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  T++C++ G    G   +A+ M   +   G  P  +TY  ++   C+ G+  EA 
Sbjct: 514 NVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAK 573

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL++        + VT+NT+     K G     V L   M +RN LPD  +Y+ +  GL
Sbjct: 574 RLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGL 633

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMM-----NSLLR-----------------GLC-- 341
           ++ GK+  A+  +  ++  G    E++M     + L R                 GLC  
Sbjct: 634 IRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCAD 693

Query: 342 -------MKSWEEKDLLEDAYQVFEKMTKKVSVTDP-GTYGIVIRTLGKGKKTDEALIHL 393
                  +  +     +  A  +F  M   ++++    TY I++    K K   +     
Sbjct: 694 LIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLY 753

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL--- 450
           +  +  G  P  +T +++I   C    +D  L LL  M        + +++MLI K    
Sbjct: 754 NIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCET 813

Query: 451 DQLEKSYD 458
           D++ K++D
Sbjct: 814 DEVGKAFD 821



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 183/418 (43%), Gaps = 9/418 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   ++ ++ + G + +    N L+ +L    +   A  FF   S  G  PNS 
Sbjct: 460 KTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSI 519

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF  +I  Y N  +  +A  + D M   G+HP+  T+  L+ +LC++G+ KEA  +LD++
Sbjct: 520 TFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL 579

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             I    +  TYN +L      G + +A  +   +    + PD YTY  +  G  + G+ 
Sbjct: 580 HYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKM 639

Query: 242 NEAMELLNEAIERG-VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             A+      + +G V+P  V + T  +G  + G     +   + M+K     D I+ + 
Sbjct: 640 VAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNV 699

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM--NSLLRGLCMKSWEEKDLLEDAYQVF 358
           +LNG  + GK+  A  IF  M+  G  +   +   N LL G     + +K  L     ++
Sbjct: 700 ILNGYSRMGKMAKAGDIF-TMMWSGITISPSLATYNILLHG-----YAKKKNLSKCSNLY 753

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
             M +     D  T   +I    K    D  L  L   +  G      TFN +I   C  
Sbjct: 754 NIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCET 813

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            ++ KA  L+ +M      P  T++D +I+ L ++    ++  L    L++G IP R+
Sbjct: 814 DEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRR 871



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 117/265 (44%), Gaps = 5/265 (1%)

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           CK N   ++ L++     G V +A E    +   G  P VYT   ++    K  +     
Sbjct: 94  CKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVW 153

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
               E + R V P+V TFN L N  C EG   K   LLK M++   +P  ++Y+T+LN  
Sbjct: 154 LFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWY 213

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+ + A+ +  +M   G E D    N L+  LC  +   K      Y + +KM K++
Sbjct: 214 CKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAK-----GYLLLKKMRKRM 268

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY  +I    K  K   A         +  +P  +T+N +I   C +G  ++AL
Sbjct: 269 ISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQAL 328

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL 450
            +L +M      P+  SY  L+  L
Sbjct: 329 TILEMMEATGPKPNEVSYSALLNGL 353



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 158/352 (44%), Gaps = 12/352 (3%)

Query: 100  EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVTTF 158
            + + A+ F  +    GL  +    ++++  Y       +A  +   M+      P++ T+
Sbjct: 674  QSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATY 733

Query: 159  TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
             IL++   K   L +   + + M R G  P+  T + L+ G C    ++   ++L  +  
Sbjct: 734  NILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLL 793

Query: 219  DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            DG+  D  T+  ++  +C+     +A +L+N      + P++ T +++ +   +  T  +
Sbjct: 794  DGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQE 853

Query: 279  GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
               LL  M +R C+PD+  Y  L+N + + G I  A  +  EM   G    +   ++L+R
Sbjct: 854  SHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVR 913

Query: 339  GL--CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
            GL  C K       +E+A  V + M +K  +    T+  ++    + +   EAL  L   
Sbjct: 914  GLAKCGK-------VEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEAL-KLKDT 965

Query: 397  IEMGHIP-RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            ++   +    I +N +I  LC +G +  AL L   + +    P+ T+Y +LI
Sbjct: 966  MDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILI 1017



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 105/228 (46%)

Query: 79   DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
            DG       FN L+M     +E   A    +  + + + P+  T   +I      +   E
Sbjct: 794  DGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQE 853

Query: 139  ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
            +  ++  M + G  P+   +  LVN +C+ G +  A ++ D+M  +G        + L++
Sbjct: 854  SHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVR 913

Query: 199  GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
            GL   G+VEEA  +L  +    L P + T+T +M  FC+     EA++L +      V  
Sbjct: 914  GLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKL 973

Query: 259  NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
            +V+ +N L +G C +G     + L K +K+R   P+  +Y  L++ + 
Sbjct: 974  DVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIF 1021



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/331 (19%), Positives = 139/331 (41%), Gaps = 37/331 (11%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           +P  +    FVD + +A   K  +   + ++K+G    +   N +L     + +   A  
Sbjct: 656 SPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGD 715

Query: 107 FFSEA-SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPN----------- 154
            F+   S   ++P+  T++I++  Y  K +  +   + + M   G  P+           
Sbjct: 716 IFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGF 775

Query: 155 ------------------------VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
                                     TF +L+   C++  + +A ++++ M      P++
Sbjct: 776 CKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDM 835

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            T++ ++  L  V  V+E++ +L  +   G  PD   Y A+++  C++G  + A +L +E
Sbjct: 836 TTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDE 895

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G++   V  + L  G  K G   +   +L  M +++ +P   +++TL++   +   
Sbjct: 896 MEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNES 955

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +  A+ +   M     ++D    N L+ GLC
Sbjct: 956 LVEALKLKDTMDFCDVKLDVIAYNVLISGLC 986


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 202/404 (50%), Gaps = 7/404 (1%)

Query: 46  KENPRSLQAQRFV--DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET 103
           +E  + L    FV    +K   +++ ++   ++ + G    + D N +L  L M N+   
Sbjct: 199 EEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGV 258

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A  FF      G +PN  TFS +I  YC +    EA  + + M + G  P++  ++IL+N
Sbjct: 259 ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILIN 318

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            L ++G+L+E   +       G K ++  ++ ++     VG + +A E+   +  +G+ P
Sbjct: 319 GLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISP 378

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V TY+ +++G C+ GR  EA  +  + +++G+ P+V+T+++L +G+CK      G GL 
Sbjct: 379 NVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLY 438

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            +M ++  +PD +  S L+NGL + G +  A+  F + V+ G  ++  + N+L+ G C +
Sbjct: 439 GIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG-CFR 497

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
               +D L    +++  M     + D  TY ++++ L +  + DEAL      ++ G  P
Sbjct: 498 LKRTRDGL----KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSP 553

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             I +  +I   C +      L +  LM  +   P    Y++LI
Sbjct: 554 DHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLI 597



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 198/447 (44%), Gaps = 40/447 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+E   +F      G    V  F+ ++ A V + +   A++ ++     G++PN  
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+I   C      EA  V   +   G  P+V T++ L++  CKS  L++   +   M
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM 441

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV------------------------K 217
            R G  P++   + L+ GL   G ++EA                                
Sbjct: 442 LRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRT 501

Query: 218 NDGLK-----------PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            DGLK           PDV TYT ++ G  + GR +EA+ L  + +++G +P+ + + TL
Sbjct: 502 RDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTL 561

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G+CK+  P  G+ + KLM+     PD   Y+ L+N   + G +   + + +E++++G 
Sbjct: 562 IDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGL 621

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           E D    N+++ G C        +   A ++FE +    +  +  T+ I+I    K  + 
Sbjct: 622 EPDIVTYNTMICGYC-----SLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRM 676

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D+A++     +E G  P  +T++ +I         + A  L   M      P+  SY +L
Sbjct: 677 DDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSIL 736

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I  L +     +A   +  A+ + ++P
Sbjct: 737 IDGLCKKGLMEEASLAFQCAIGRHLLP 763



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/456 (23%), Positives = 191/456 (41%), Gaps = 79/456 (17%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   L + I+++  + K+G + +V  ++ L+  L        A   F +    GL P+ 
Sbjct: 356 VRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSV 415

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+S +I  +C   +  +   +   M   G+ P+V   ++L+N L + G + EAL    Q
Sbjct: 416 LTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQ 475

Query: 181 -----------------------------------MGRIGCKPNIQTYNCLLKGLCYVGR 205
                                              MG     P++ TY  L+KGL   GR
Sbjct: 476 AVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGR 535

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV--------------------------- 238
           ++EA  +   +   G  PD   Y  ++DGFCK                            
Sbjct: 536 LDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNV 595

Query: 239 --------GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
                   G     +ELL E I+ G+ P++VT+NT+  GYC      K + L +++K   
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             P+ I+++ L++   K G++  A+ IF  M+  G E +    + L+ G     + + + 
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG-----YFKTEN 710

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
            E A++++EKM       +  +Y I+I  L K    +EA +    AI    +P  I +  
Sbjct: 711 TESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGI 770

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           +I+  C  G++ +A++L    Y+H  +      D+L
Sbjct: 771 LIRGYCKVGRLAEAMML----YDHMLVNGIMPDDLL 802



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 178/439 (40%), Gaps = 71/439 (16%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN-------------------DFFEARKV 142
           E   +F     +YG  P S  +S ++ CYC                        + A ++
Sbjct: 123 EVLGEFHGSFRNYGSNP-STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEM 181

Query: 143 IDCMFDN--------GYHP---NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           +D + D+         Y      +  +  + NS  K G +++ L     +   G  P I 
Sbjct: 182 LDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIV 241

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
             N +LKGLC   ++  A +    +   G  P++ T++ +++ +CK  R +EA  L N  
Sbjct: 242 DCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLM 301

Query: 252 IERGVTPNVVTFNTLFNG-----------------------------------YCKEGTP 276
           IE+G+ P++V ++ L NG                                   Y + G  
Sbjct: 302 IEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDL 361

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            K + +   M K    P+ ++YS L+NGL + G++  A  +F ++++ G E      +SL
Sbjct: 362 GKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSL 421

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           + G C     + + L D + ++  M +K  V D     ++I  L +    DEAL     A
Sbjct: 422 IDGFC-----KSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQA 476

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           ++ G       FN +I       +    L +  LM  +  IP   +Y +L+  L +  + 
Sbjct: 477 VKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRL 536

Query: 457 YDACALYGAALKQGVIPQR 475
            +A AL+   LK+G  P  
Sbjct: 537 DEALALFFQLLKKGFSPDH 555



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 133/287 (46%), Gaps = 35/287 (12%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +  L+  L      + A+  F +    G +P+   +  +I  +C K D     ++  
Sbjct: 520 VVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFK 579

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M  NG  P++  + +L+N   + G ++  LE+L ++ + G +P+I TYN ++ G C + 
Sbjct: 580 LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLK 639

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG--------- 255
              +A ++   +K    +P+  T+T ++D +CK GR ++AM + +  +ERG         
Sbjct: 640 IFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYS 699

Query: 256 --------------------------VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
                                     V+PN+V+++ L +G CK+G   +     +    R
Sbjct: 700 CLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGR 759

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
           + LPD I+Y  L+ G  K G++  A+ ++  M+  G   D+ +  +L
Sbjct: 760 HLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 202/422 (47%), Gaps = 11/422 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   +++ ++IF  +   G N SV   N +L ++V   E  +   F  E     + P+ 
Sbjct: 134 LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDV 193

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+I+I   C +  F ++  ++  M  +GY P + T+  +++  CK GR K A+E+LD 
Sbjct: 194 ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G   ++ TYN L+  LC   R+ + Y +L +++   + P+  TY  +++GF   G+
Sbjct: 254 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A +LLNE +  G++PN VTFN L +G+  EG   + + +  +M+ +   P ++SY  
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LL+GL K  +   A   +  M R G  V       ++ GLC     +   L++A  +  +
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC-----KNGFLDEAVVLLNE 428

Query: 361 MTKKVSVTDPGTYGIVIR---TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           M+K     D  TY  +I     +G+ K   E +  ++    +G  P  I ++ +I   C 
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY---RVGLSPNGIIYSTLIYNCCR 485

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
            G + +A+ +   M          ++++L+T L +  K  +A          G++P    
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545

Query: 478 QD 479
            D
Sbjct: 546 FD 547



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 205/479 (42%), Gaps = 44/479 (9%)

Query: 35  ASLSTAESLDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLM 93
           AS    E L    +P  +     +D  I     KE + +F  ++  G   S   +  LL 
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF-EARKVIDCMFDNGYH 152
            L    E + A  F+      G+     T++ MI   C KN F  EA  +++ M  +G  
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC-KNGFLDEAVVLLNEMSKDGID 435

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++ T++ L+N  CK GR K A E++ ++ R+G  PN   Y+ L+   C +G ++EA  +
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +  +G   D +T+  ++   CK G+  EA E +      G+ PN V+F+ L NGY  
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G  +K   +   M K    P   +Y +LL GL K G +R A    K +      VD  M
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N+LL  +C KS      L  A  +F +M ++  + D  TY  +I  L +  KT  A++ 
Sbjct: 616 YNTLLTAMC-KSGN----LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 670

Query: 393 LHHA------------------------------------IEMGHIPRTITFNNVIQALC 416
              A                                      +GH P  +T N +I    
Sbjct: 671 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 730

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
             GKI+K   LL  M      P+ T+Y++L+    + +    +  LY + +  G++P +
Sbjct: 731 RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 789



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 98  LNEQETAVKFFSEASSYGLA-PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
           L   +++  F +  ++Y L   N   + I+IR Y  +    ++ ++   M   G++P+V 
Sbjct: 100 LMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY 159

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           T   ++ S+ KSG        L +M +    P++ T+N L+  LC  G  E++  ++  +
Sbjct: 160 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 219

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           +  G  P + TY  V+  +CK GR   A+ELL+    +GV  +V T+N L +  C+    
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            KG  LL+ M+KR   P++++Y+TL+NG    GK+  A  +  EM+ FG   +    N+L
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           + G       E +  ++A ++F  M  K       +YG+++  L K  + D A       
Sbjct: 340 IDG----HISEGN-FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
              G     IT+  +I  LC  G +D+A++LL  M +    P   +Y  LI    ++ + 
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454

Query: 457 YDA----CALYGAALK-QGVI 472
             A    C +Y   L   G+I
Sbjct: 455 KTAKEIVCRIYRVGLSPNGII 475



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 195/474 (41%), Gaps = 66/474 (13%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LKE I I++++  +G       FN L+ +L    +   A +F    +S G+ PN+ +F  
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  Y N  +  +A  V D M   G+HP   T+  L+  LCK G L+EA + L  +  + 
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              +   YN LL  +C  G + +A  +   +    + PD YTYT+++ G C+ G++  A+
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668

Query: 246 ELLNEAIERG------------------------------------VTPNVVTFNTLFNG 269
               EA  RG                                     TP++VT N + +G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           Y + G   K   LL  M  +N  P+  +Y+ LL+G  K   +  +  +++ ++  G   D
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788

Query: 330 ERMMNSLLRGLCMKSWEEKDL------------------------------LEDAYQVFE 359
           +   +SL+ G+C  +  E  L                              +  A+ + +
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            MT      D  T   ++  L +  +  E+ + LH   + G  P +  +  +I  LC  G
Sbjct: 849 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            I  A ++   M  H   P   +   ++  L +  K+ +A  L    LK  ++P
Sbjct: 909 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 962



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/482 (20%), Positives = 193/482 (40%), Gaps = 76/482 (15%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS----- 120
           L E + + + + KDG +  +  ++ L+     +   +TA +        GL+PN      
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 121 ------------------------------WTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
                                         +TF++++   C      EA + + CM  +G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PN  +F  L+N    SG   +A  V D+M ++G  P   TY  LLKGLC  G + EA 
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           + L ++       D   Y  ++   CK G   +A+ L  E ++R + P+  T+ +L +G 
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658

Query: 271 CKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           C++G  +  +   K  + R N LP+K+ Y+  ++G+ K G+ +  +   ++M   G   D
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N+++ G     +     +E    +  +M  +    +  TY I++    K K    +
Sbjct: 719 IVTTNAMIDG-----YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773

Query: 390 LIHLHHAIEMGHIPRTIT-----------------------------------FNNVIQA 414
            +     I  G +P  +T                                   FN +I  
Sbjct: 774 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            C  G+I+ A  L+ +M        + + D +++ L++  +  ++  +     KQG+ P+
Sbjct: 834 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893

Query: 475 RK 476
            +
Sbjct: 894 SR 895



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/404 (23%), Positives = 170/404 (42%), Gaps = 51/404 (12%)

Query: 88   FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            +N LL A+        AV  F E     + P+S+T++ +I   C K      + VI  +F
Sbjct: 616  YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK-----GKTVIAILF 670

Query: 148  D------NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
                       PN   +T  V+ + K+G+ K  +   +QM  +G  P+I T N ++ G  
Sbjct: 671  AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 730

Query: 202  YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             +G++E+  ++L  + N    P++ TY  ++ G+ K    + +  L    I  G+ P+ +
Sbjct: 731  RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL 790

Query: 262  TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            T ++L  G C+      G+ +LK    R    D+ +++ L++     G+I  A  + K M
Sbjct: 791  TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 850

Query: 322  VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK----------------V 365
               G  +D+   ++++  L           +++  V  +M+K+                 
Sbjct: 851  TSLGISLDKDTCDAMVSVL-----NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905

Query: 366  SVTDPGTYGIV-------------------IRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
             V D  T  +V                   +R L K  K DEA + L   ++M  +P   
Sbjct: 906  RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965

Query: 407  TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            +F  ++   C  G + +AL L  +M          SY++LIT L
Sbjct: 966  SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 120/252 (47%)

Query: 89   NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
            + L++ +   N  E  +K        G+  + +TF+++I   C   +   A  ++  M  
Sbjct: 793  HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852

Query: 149  NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
             G   +  T   +V+ L ++ R +E+  VL +M + G  P  + Y  L+ GLC VG ++ 
Sbjct: 853  LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912

Query: 209  AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
            A+ +   +    + P     +A++    K G+++EA  LL   ++  + P + +F TL +
Sbjct: 913  AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 972

Query: 269  GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
              CK G  ++ + L  +M       D +SY+ L+ GL   G +  A  +++EM   GF  
Sbjct: 973  LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032

Query: 329  DERMMNSLLRGL 340
            +     +L+RGL
Sbjct: 1033 NATTYKALIRGL 1044



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/348 (20%), Positives = 146/348 (41%), Gaps = 7/348 (2%)

Query: 35   ASLSTAESLD-LKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLL 92
            A +   E +D L   P  +     +D   +   +++  D+   +       +++ +N LL
Sbjct: 702  AGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 761

Query: 93   MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
                   +  T+   +      G+ P+  T   ++   C  N      K++      G  
Sbjct: 762  HGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVE 821

Query: 153  PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
             +  TF +L++  C +G +  A +++  M  +G   +  T + ++  L    R +E+  +
Sbjct: 822  VDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 881

Query: 213  LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
            L  +   G+ P+   Y  +++G C+VG    A  +  E I   + P  V  + +     K
Sbjct: 882  LHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 941

Query: 273  EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
             G   +   LL+ M K   +P   S++TL++   K G +  A+ +   M   G ++D   
Sbjct: 942  CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1001

Query: 333  MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
             N L+ GLC K       +  A++++E+M     + +  TY  +IR L
Sbjct: 1002 YNVLITGLCAKGD-----MALAFELYEEMKGDGFLANATTYKALIRGL 1044



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 3/241 (1%)

Query: 88   FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            FN L+       E   A       +S G++ +  T   M+      + F E+R V+  M 
Sbjct: 827  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886

Query: 148  DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRV 206
              G  P    +  L+N LC+ G +K A  V ++M     C PN+   + +++ L   G+ 
Sbjct: 887  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKA 945

Query: 207  EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            +EA  +L  +    L P + ++T +M   CK G   EA+EL       G+  ++V++N L
Sbjct: 946  DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1005

Query: 267  FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL-KWGKIRPAVSIFKEMVRFG 325
              G C +G       L + MK    L +  +Y  L+ GLL +      A  I K+++  G
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARG 1065

Query: 326  F 326
            F
Sbjct: 1066 F 1066


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 191/408 (46%), Gaps = 22/408 (5%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI-DCM 146
           +N L+ +     +   A K   +    GL P+  TF+  I   C      EA ++  D  
Sbjct: 220 YNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQ 279

Query: 147 FDNGY---HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
            D      HPNV T+ +++   CK G L+EA  ++D M R     N+++YN  L GL   
Sbjct: 280 IDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRN 339

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G++ EA+ +L  +   G++PD+Y+Y  VMDG CK G  ++A  L+   I  G+ P+ VT+
Sbjct: 340 GKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTY 399

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           +TL +GYC +G   +   LL  M   NC P+  + + LL+ L K G+I  A ++ ++M  
Sbjct: 400 STLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNE 459

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDL----------------LEDAY--QVFEKMTKKV 365
            G+ VD    N ++  LC     +K +                L +++   V + ++ K 
Sbjct: 460 KGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKK 519

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY  +I  L K  + D+A       +  G  P +  ++  I + C EGKI  A 
Sbjct: 520 CTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAF 579

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +L  M +     +  +Y+ LI  L    + ++   L     ++GV P
Sbjct: 580 QVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSP 627



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 184/382 (48%), Gaps = 12/382 (3%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+  +N LL + +  N  E     + +     ++P ++TF+++I   C+     +AR++ 
Sbjct: 111 SIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELF 170

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M   G  PN  TF ILV   C++G   + LE+L QM  +G  PN   YN L+   C  
Sbjct: 171 DKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKE 230

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI---ERGVT-PN 259
           G+  +A +++  ++ DGL P V T+ + +   C  G+  EA  +  +     E G+  PN
Sbjct: 231 GKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPN 290

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           V+T+  +  G+CKEG   +   L+  MK+     +  SY+  L GL++ GK+  A  + K
Sbjct: 291 VITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLK 350

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM+  G E D    N ++ GLC     +  +L DA  +   M +   + D  TY  ++  
Sbjct: 351 EMLGIGIEPDIYSYNIVMDGLC-----KNGMLSDARMLMGLMIRNGILPDTVTYSTLLHG 405

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
                K  EA   LH  I     P T T N ++ +L  EG+I +A  LL  M E      
Sbjct: 406 YCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVD 465

Query: 440 RTSYDMLITKL---DQLEKSYD 458
             + +++I  L    QL+K+ +
Sbjct: 466 TVTCNIIINALCNNGQLDKAIE 487



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 192/438 (43%), Gaps = 67/438 (15%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS---SYGLA-PNSWTFSIMI 127
           + D +++DG    V  FN  + AL    +   A + F +       GL  PN  T+ +M+
Sbjct: 239 LVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLML 298

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             +C +    EA+ ++D M  N    N+ ++ I +  L ++G+L EA  VL +M  IG +
Sbjct: 299 MGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIE 358

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+I +YN ++ GLC  G + +A  ++  +  +G+ PD  TY+ ++ G+C  G+  EA  L
Sbjct: 359 PDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNL 418

Query: 248 LNEAIERGVTPNV-----------------------------------VTFNTLFNGYCK 272
           L+E I    +PN                                    VT N + N  C 
Sbjct: 419 LHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCN 478

Query: 273 EGTPMKGVGLLKLM-----------------------KKRNCLPDKISYSTLLNGLLKWG 309
            G   K + ++  M                         + C PD ++YST+++GL K G
Sbjct: 479 NGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAG 538

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A   F EM+  G + D  + ++ +   C      +  +  A+QV + M K+     
Sbjct: 539 RLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFC-----REGKISSAFQVLKDMEKRGCNKT 593

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  +I  LG   +  E    +    E G  P   T+N+++  LC  G+I+ A  +L 
Sbjct: 594 LQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLD 653

Query: 430 LMYEHAKIPSRTSYDMLI 447
            M +    P+ +S+ +LI
Sbjct: 654 EMLQKGISPNISSFRILI 671



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 131/266 (49%), Gaps = 6/266 (2%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P+  T+S +I   C      +A+K    M   G  P+   +   ++S C+ G++  A +
Sbjct: 521 TPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQ 580

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           VL  M + GC   +QTYN L+ GL    ++ E Y ++  ++  G+ PDV TY  +++  C
Sbjct: 581 VLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLC 640

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + GR N+A  +L+E +++G++PN+ +F  L   +CK     K    +  +    C   + 
Sbjct: 641 EGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCK-ACDFKASHEVFEIALNVCGHKEA 699

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
            Y+ + N LL  GK+  A  +F+  +   F++   +   L+  LC    +EK  LE A  
Sbjct: 700 LYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCK---DEK--LEAASD 754

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGK 382
           V  ++  K    DP ++  VI   GK
Sbjct: 755 VLHRLIDKGYQFDPASFMPVIDGFGK 780



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 165/344 (47%), Gaps = 29/344 (8%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A     E  S   +PN++T ++++     +    EA  ++  M + GY  +  T  I++N
Sbjct: 415 ANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIIN 474

Query: 164 SLCKSGRLKEALEVLDQM--------GRIG---------------CKPNIQTYNCLLKGL 200
           +LC +G+L +A+E+++ M        G +G               C P++ TY+ ++ GL
Sbjct: 475 ALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGL 534

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C  GR+++A +  + + + GL+PD   Y   +  FC+ G+ + A ++L +  +RG    +
Sbjct: 535 CKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTL 594

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            T+N+L  G   +    +  GL+  M+++   PD  +Y+ +LN L + G+I  A S+  E
Sbjct: 595 QTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDE 654

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M++ G   +      L++  C K+ + K     +++VFE +   V       Y ++   L
Sbjct: 655 MLQKGISPNISSFRILIKAFC-KACDFK----ASHEVFE-IALNVCGHKEALYTLMFNEL 708

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             G K  EA      A++         + ++I  LC + K++ A
Sbjct: 709 LVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAA 752



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 150/300 (50%), Gaps = 9/300 (3%)

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            P++  + +L+ S  +  R++    +   M      P   T+N L+  LC  G +E+A E
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +   +   G +P+ +T+  ++ G+C+ G +++ +ELL +    G+ PN V +NTL + +C
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           KEG       L+  M++   +P   ++++ ++ L   GKI  A  IF++M     ++DE 
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDM-----QIDEE 283

Query: 332 MM----NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           +     N +   L +  + ++ +LE+A  + + M +  +  +  +Y I +  L +  K  
Sbjct: 284 LGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLL 343

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA I L   + +G  P   ++N V+  LC  G +  A +L+ LM  +  +P   +Y  L+
Sbjct: 344 EAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLL 403



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 1/203 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +   ++K G N ++  +N L++ L   N+         E    G++P+  T++ M+ C C
Sbjct: 581 VLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLC 640

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A  V+D M   G  PN+++F IL+ + CK+   K + EV +    + C     
Sbjct: 641 EGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNV-CGHKEA 699

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            Y  +   L   G+V EA E+     +       + Y  ++D  CK  +   A ++L+  
Sbjct: 700 LYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRL 759

Query: 252 IERGVTPNVVTFNTLFNGYCKEG 274
           I++G   +  +F  + +G+ K G
Sbjct: 760 IDKGYQFDPASFMPVIDGFGKMG 782


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 201/432 (46%), Gaps = 29/432 (6%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   + +++KK G   S+  +N  L+ L+   +         E    G+ PN ++++I
Sbjct: 309 MEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNI 368

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C  +   +AR+++D M  NG +P+  T+T L++  C  G++ EA  +L++M R G
Sbjct: 369 VMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKG 428

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN  T N LL  L   GR  EA EML  +     + D  T   V++G C+ G   +A 
Sbjct: 429 CHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKAS 488

Query: 246 ELLNEAIERGV----------------------TPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           E+++E    G                        P+V+T+ TL NG CK G   +     
Sbjct: 489 EVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKF 548

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M  +N  PD ++Y T +    K GKI  A+ + K+M R G     +  NSL+ GL  K
Sbjct: 549 IEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSK 608

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI- 402
                  + + Y + ++M ++    D  TY  +I  L +G KT +A   LH  ++ G + 
Sbjct: 609 GQ-----IFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVS 663

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P   +F  +I+A C  G   K    LF +           Y ++  +L    K  DA  L
Sbjct: 664 PNVSSFKILIKAFCKSGDF-KVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKEL 722

Query: 463 YGAALKQGVIPQ 474
           + A+L++ ++ +
Sbjct: 723 FEASLERSLLSK 734



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 217/477 (45%), Gaps = 31/477 (6%)

Query: 26  FNKLV--VFAAASLSTAESLDLKENPRSLQAQRFVDRI------KASPLKERIDIFDSIK 77
           FN L+  +  + +L  A  L  K + +  Q  +F   I      +A   K+ ++  D   
Sbjct: 154 FNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVDG-- 211

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G N +   +N L+ +    +  + A K     +  GL P+  TF+  I   C     F
Sbjct: 212 KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVF 271

Query: 138 EARKVIDCMFDNGY----HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
           EA ++   M  +G      PNV TF +++   C+ G ++EA  +++ M + G   ++++Y
Sbjct: 272 EASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESY 331

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N  L GL   G++ E   +L  +  +G++P++Y+Y  VMDG C+     +A  L++  + 
Sbjct: 332 NTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVS 391

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
            GV P+ VT+ TL +GYC +G   +   +L  M ++ C P+  + +TLLN L K G+   
Sbjct: 392 NGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSE 451

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK------DLLEDAYQVFEKMTK---- 363
           A  + ++M    +++D    N ++ GLC     EK      ++  D      K       
Sbjct: 452 AEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGL 511

Query: 364 -------KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
                    +V D  TY  +I  L K  K +EA       +     P ++T++  +   C
Sbjct: 512 VNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFC 571

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +GKI  AL +L  M  +    +  +Y+ LI  L    + ++   L     ++G+ P
Sbjct: 572 KQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHP 628



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 177/370 (47%), Gaps = 14/370 (3%)

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
           N        +++    G+ P ++TF+++I+  C  N    AR++ D M + G  PN  T 
Sbjct: 130 NRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTV 189

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
            ILV   C++GR K+ALE +D  G++G   N   YN L+   C     +EA +++  +  
Sbjct: 190 GILVRGFCRAGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTE 247

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG----VTPNVVTFNTLFNGYCKEG 274
            GL PDV T+ + +   C+ G+  EA  +  +    G      PNVVTFN +  G+C+EG
Sbjct: 248 KGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEG 307

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              +   L++ MKK        SY+T L GLL+ GK+    S+  EMV  G E +    N
Sbjct: 308 MMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYN 367

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            ++ GLC        ++ DA ++ + M       D  TY  ++       K  EA   L+
Sbjct: 368 IVMDGLC-----RNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILN 422

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---D 451
             I  G  P T T N ++ +L  EG+  +A  +L  M E +      + ++++  L    
Sbjct: 423 EMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNG 482

Query: 452 QLEKSYDACA 461
           +LEK+ +  +
Sbjct: 483 ELEKASEVVS 492



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 197/438 (44%), Gaps = 70/438 (15%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  + + G N     FN L+ +L   N  + A + F + S  G  PN +T  I++R +C
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 132 -----------------------------------NKNDFFEARKVIDCMFDNGYHPNVT 156
                                              + ND  EA K+++ M + G  P+V 
Sbjct: 198 RAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMND--EAEKLVERMTEKGLLPDVV 255

Query: 157 TFTILVNSLCKSGRLKEALEVLDQM---GRIGC-KPNIQTYNCLLKGLCYVGRVEEAYEM 212
           TF   +++LC++G++ EA  +   M   G +G  KPN+ T+N +LKG C  G +EEA  +
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           +  +K  G    + +Y   + G  + G+  E   +L+E +E G+ PN+ ++N + +G C+
Sbjct: 316 VETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCR 375

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
               +    L+ LM      PD ++Y+TLL+G    GK+  A +I  EM+R G   +   
Sbjct: 376 NHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYT 435

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA--- 389
            N+LL  L    W+E    E A ++ +KM +K    D  T  IV+  L +  + ++A   
Sbjct: 436 CNTLLNSL----WKEGRKSE-AEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEV 490

Query: 390 --------------------LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
                               L++  H +   ++P  IT+  +I  LC  GK+++A     
Sbjct: 491 VSEMWTDGTNSLGKENPVAGLVNSIHNVST-NVPDVITYTTLINGLCKVGKLEEAKKKFI 549

Query: 430 LMYEHAKIPSRTSYDMLI 447
            M      P   +YD  +
Sbjct: 550 EMMAKNLHPDSVTYDTFV 567



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 191/414 (46%), Gaps = 31/414 (7%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGL----APNSWTFSIMIRCYCNKNDFFEAR 140
           V  FN  + AL    +   A + F +    G      PN  TF++M++ +C +    EAR
Sbjct: 254 VVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEAR 313

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
            +++ M   G   ++ ++   +  L ++G+L E   VLD+M   G +PNI +YN ++ GL
Sbjct: 314 SLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGL 373

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C    + +A  ++  + ++G+ PD  TYT ++ G+C  G+  EA  +LNE I +G  PN 
Sbjct: 374 CRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNT 433

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            T NTL N   KEG   +   +L+ M +++   D ++ + ++NGL + G++  A  +  E
Sbjct: 434 YTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSE 493

Query: 321 MVRFGFEV----------------------DERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           M   G                         D     +L+ GLC     +   LE+A + F
Sbjct: 494 MWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLC-----KVGKLEEAKKKF 548

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            +M  K    D  TY   +    K  K   AL  L      G      T+N++I  L  +
Sbjct: 549 IEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSK 608

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           G+I +   L+  M E    P   +Y+ +I  L +  K+ DA +L    L +GV+
Sbjct: 609 GQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVV 662



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 198/434 (45%), Gaps = 31/434 (7%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   L E   + D + ++G   ++  +N ++  L   +    A +      S G+ P++
Sbjct: 339 LRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDT 398

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ ++  YC+K   FEA+ +++ M   G HPN  T   L+NSL K GR  EA E+L +
Sbjct: 399 VTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQK 458

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK------------------ 222
           M     + +  T N ++ GLC  G +E+A E++  +  DG                    
Sbjct: 459 MNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNV 518

Query: 223 ----PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
               PDV TYT +++G CKVG+  EA +   E + + + P+ VT++T    +CK+G    
Sbjct: 519 STNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISS 578

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            + +LK M++  C     +Y++L+ GL   G+I     +  EM   G   D    N+++ 
Sbjct: 579 ALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMIN 638

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVT-DPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            LC     E    +DA  +  +M  K  V+ +  ++ I+I+   K      A      A+
Sbjct: 639 CLC-----EGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVAL 693

Query: 398 EM-GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
            + GH  +   ++ +   L   GK+  A  L     E + +     Y+ LI KL +  + 
Sbjct: 694 SVCGH--KEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRL 751

Query: 457 YDACALYGAALKQG 470
            DA  L    + +G
Sbjct: 752 DDAHGLLQKLIDKG 765



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 5/259 (1%)

Query: 48  NPRSLQAQRFV-DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           +P S+    FV +  K   +   + +   ++++G + ++  +N L++ L    +      
Sbjct: 557 HPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYG 616

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY-HPNVTTFTILVNSL 165
              E    G+ P+  T++ MI C C      +A  ++  M D G   PNV++F IL+ + 
Sbjct: 617 LMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAF 676

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CKSG  K A E+ D    + C      Y+ +   L   G++ +A E+        L    
Sbjct: 677 CKSGDFKVACELFDVALSV-CGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKN 735

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           + Y  ++D  CK GR ++A  LL + I++G   +  +F  + +G  K G   +   L ++
Sbjct: 736 FMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRI 795

Query: 286 MKKRNCLPDKISYSTLLNG 304
           M+    L DK S  T  NG
Sbjct: 796 MEL--ALEDKTSDRTYRNG 812



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 38/280 (13%)

Query: 72  IFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           + +SI    TN   V  +  L+  L  + + E A K F E  +  L P+S T+   +  +
Sbjct: 511 LVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNF 570

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +     A +V+  M  NG    + T+  L+  L   G++ E   ++D+M   G  P+I
Sbjct: 571 CKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDI 630

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL-KPDVYTYTAVMDGFCKVG---------- 239
            TYN ++  LC  G+ ++A  +L  + + G+  P+V ++  ++  FCK G          
Sbjct: 631 CTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFD 690

Query: 240 ------------------------RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
                                   + ++A EL   ++ER +      +  L +  CK+G 
Sbjct: 691 VALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGR 750

Query: 276 PMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
                GLL KL+ K  C  D  S+  +++GL K G  + A
Sbjct: 751 LDDAHGLLQKLIDKGYCF-DHSSFIPVIDGLSKRGNKQQA 789



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 126/289 (43%), Gaps = 38/289 (13%)

Query: 220 GLKPDVYTYTAVMD-----------------------------------GFCKVGRSNEA 244
           G+ P+ YT+  ++                                    GFC+ GR+ +A
Sbjct: 146 GVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQA 205

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           +E ++  +  G   N V +NTL + +CK+    +   L++ M ++  LPD +++++ ++ 
Sbjct: 206 LEFVDGKM--GGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISA 263

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L + GK+  A  IF++M   G E+     N +   L +K + ++ ++E+A  + E M K 
Sbjct: 264 LCRAGKVFEASRIFRDMQMDG-ELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKG 322

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            +     +Y   +  L +  K  E    L   +E G  P   ++N V+  LC    +  A
Sbjct: 323 GNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDA 382

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L+ LM  +   P   +Y  L+       K ++A A+    +++G  P
Sbjct: 383 RRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHP 431



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 9/168 (5%)

Query: 312 RP--AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           RP    S++ +M++ G   +    N L++ LC     E + L+ A ++F+KM++K    +
Sbjct: 131 RPHYVTSLYTDMIQTGVNPETYTFNLLIQSLC-----ESNALDHARELFDKMSEKGCQPN 185

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             T GI++R   +  +T +AL  +    +MG     + +N ++ + C +   D+A  L+ 
Sbjct: 186 KFTVGILVRGFCRAGRTKQALEFVDG--KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVE 243

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
            M E   +P   +++  I+ L +  K ++A  ++      G +   KP
Sbjct: 244 RMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKP 291


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 184/370 (49%), Gaps = 5/370 (1%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G    +   N LL      N    AV    +    G  P++ TF+ +I      N   
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA  +ID M   G  P++ T+  +VN LCK G    AL +L++M     + N+  Y+ ++
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
             LC     ++A  +   ++N G++P+V TY++++   C  GR ++A  LL++ IER + 
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PN+VTF+ L + + K+G  +K   L + M KR+  P+  +YS+L+NG     ++  A  +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
            + M+R     +    N+L+ G C     +K +     ++F +M+++  V +  TY  +I
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM-----ELFREMSQRGLVGNTVTYTTLI 435

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               + +  D A +     + +G  P  +T+N ++  LC  GK+ KA+++   +      
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495

Query: 438 PSRTSYDMLI 447
           P   +Y+++I
Sbjct: 496 PDIYTYNIMI 505



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 180/355 (50%), Gaps = 5/355 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + + D + + G       F  L+  L + N+   AV         G  P+  T+  
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C + D   A  +++ M       NV  ++ +++SLCK     +AL +  +M   G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+ TY+ L+  LC  GR  +A  +L ++    + P++ T++A++D F K G+  +A 
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L  E I+R + PN+ T+++L NG+C      +   +L+LM +++CLP+ ++Y+TL+NG 
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++   + +F+EM + G   +     +L+ G     ++ +D  ++A  VF++M    
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF----FQARDC-DNAQMVFKQMVSVG 458

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
              +  TY I++  L K  K  +A++   +       P   T+N +I+ +C  GK
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 157/321 (48%), Gaps = 5/321 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  F+ L++++ K  +    +   ++M  +G   N+ TYN L+   C   R+  A  +
Sbjct: 76  PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +PD+ T  ++++GFC   R ++A+ L+++ +E G  P+ VTF TL +G   
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                + V L+  M +R C PD ++Y  ++NGL K G    A+++  +M     E +  +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            ++++  LC    E     +DA  +F +M  K    +  TY  +I  L    +  +A   
Sbjct: 256 YSTVIDSLCKYRHE-----DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRL 310

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L   IE    P  +TF+ +I A   +GK+ KA  L   M + +  P+  +Y  LI     
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370

Query: 453 LEKSYDACALYGAALKQGVIP 473
           L++  +A  +    +++  +P
Sbjct: 371 LDRLGEAKQMLELMIRKDCLP 391



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 23/111 (20%), Positives = 53/111 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + + +++F  + + G   +   +  L+       + + A   F +  S G+ PN  
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
           T++I++   C      +A  V + +  +   P++ T+ I++  +CK+G+ K
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 180/372 (48%), Gaps = 5/372 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           I  D  N  +S  ++ L  + +  + E  +K   E    GL PN +T++ +I   C    
Sbjct: 179 ISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGK 238

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA +V+  M   G  P+   +T L++  CK G +  A  + D+M +    P+  TY  
Sbjct: 239 VAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTA 298

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           ++ GLC  GRV EA ++   +    L+PD  TYTA++DG+CK G+  EA  L N+ ++ G
Sbjct: 299 VICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMG 358

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           +TPN+VT+  L +G CK G       LL  M ++    +  +Y++L+NGL K G I  AV
Sbjct: 359 LTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAV 418

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            + K+M   GF  D     +L+   C KS E    +  A+++  +M  +       T+ +
Sbjct: 419 KLMKDMEVAGFHPDAVTYTTLMDAYC-KSRE----MVRAHELLRQMLDRELQPTVVTFNV 473

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           ++         ++    L   +E G +P   T+N++I+  C    +     +   M    
Sbjct: 474 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 533

Query: 436 KIPSRTSYDMLI 447
            +P   +Y++LI
Sbjct: 534 VVPDGNTYNILI 545



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 157/318 (49%), Gaps = 5/318 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD ++K   +     +  ++  L        A K F E     L P+  T++ +I  YC
Sbjct: 280 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 339

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    EA  + + M   G  PN+ T+T L + LCK G +  A E+L +M R G + NI 
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 399

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ GLC  G +++A +++ +++  G  PD  TYT +MD +CK      A ELL + 
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           ++R + P VVTFN L NG+C  G    G  LLK M ++  +P+  +Y++L+        +
Sbjct: 460 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 519

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           R    I++ M   G   D    N L++G C     +   +++A+ +   M  K       
Sbjct: 520 RATTEIYRGMCAKGVVPDGNTYNILIKGHC-----KARNMKEAWFLHRDMVGKGFNLTVS 574

Query: 372 TYGIVIRTLGKGKKTDEA 389
           +Y  +I+   K KK  EA
Sbjct: 575 SYNALIKGFYKRKKFLEA 592



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 127/273 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +KE   + + + + G   ++  +  L   L    E +TA +   E    GL  N +
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 399

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C   +  +A K++  M   G+HP+  T+T L+++ CKS  +  A E+L QM
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                +P + T+N L+ G C  G +E+  ++L  +   G+ P+  TY +++  +C     
Sbjct: 460 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 519

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
               E+      +GV P+  T+N L  G+CK     +   L + M  +       SY+ L
Sbjct: 520 RATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNAL 579

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
           + G  K  K   A  +F++M R G   D  + N
Sbjct: 580 IKGFYKRKKFLEARELFEQMRREGLVADREIYN 612



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 113/252 (44%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   + + G   ++  +N L+  L      + AVK   +    G  P++ T++ ++  Y
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +   A +++  M D    P V TF +L+N  C SG L++  ++L  M   G  PN 
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L+K  C    +    E+   +   G+ PD  TY  ++ G CK     EA  L  +
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 563

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + +G    V ++N L  G+ K    ++   L + M++   + D+  Y+   +     GK
Sbjct: 564 MVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGK 623

Query: 311 IRPAVSIFKEMV 322
           +   + +  E +
Sbjct: 624 MELTLELCDEAI 635



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 5/219 (2%)

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           +DG     +    ++L+ E   +G+ PN  T+N +    CK G   +   +L+ M     
Sbjct: 195 LDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 254

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            PD + Y+TL++G  K G +  A  +F EM +     D     +++ GLC     +   +
Sbjct: 255 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLC-----QTGRV 309

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
            +A ++F +M  K    D  TY  +I    K  K  EA    +  ++MG  P  +T+  +
Sbjct: 310 MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTAL 369

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              LC  G++D A  LL  M       +  +Y+ L+  L
Sbjct: 370 ADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGL 408



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 84/182 (46%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  FN L+    M    E   K        G+ PN+ T++ +I+ YC +N+     ++ 
Sbjct: 467 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY 526

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G  P+  T+ IL+   CK+  +KEA  +   M   G    + +YN L+KG    
Sbjct: 527 RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 586

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            +  EA E+   ++ +GL  D   Y    D     G+    +EL +EAIE+ +  ++ T 
Sbjct: 587 KKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTK 646

Query: 264 NT 265
           NT
Sbjct: 647 NT 648


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 167/332 (50%), Gaps = 8/332 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K +  +E   + + +   G N  V  FN ++      N  E A + +      G  P++
Sbjct: 127 VKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDN 186

Query: 121 WTFSIMIRCYCNKNDFFEARKVID--CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
            ++ I+I          E+ K++    M   GY PNV TF+ L++ LC++G L++ALEV 
Sbjct: 187 VSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 246

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
             M   GCKPN  TY  L+ GLC   +V +A E+   +    + PD   Y +++ G+CK 
Sbjct: 247 GSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 306

Query: 239 GRSNEAMELLNE-AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           G  +EA +L  E +   G+ P +VTFNTL +G+CK G   +   L+  M  +    D  +
Sbjct: 307 GSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCT 366

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y  L+ GL +  K+  A+ ++K+M    F +D     S + GLC     +   ++ AY V
Sbjct: 367 YRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLC-----KTGNIDQAYAV 421

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
           FE   K  +V +P T+ I+  +L K  + ++A
Sbjct: 422 FEATRKSGAVPNPETFRILSESLIKLGRVEDA 453



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 213/447 (47%), Gaps = 34/447 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFF-SEASSYGLAPNS 120
           KA  L + +++F+++K +    S+  +N L+ +     E   A+  F S      + P+ 
Sbjct: 22  KAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDR 81

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           WT++ +I   C+  +   ARK++  M D     NV T++ ++ SL K  + +E+ +VL++
Sbjct: 82  WTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEE 141

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC P++  +N +++G      +E+A E+  ++   G KPD  +Y  ++ G  K+G+
Sbjct: 142 MMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGK 201

Query: 241 SNEAMELLNEAIER--GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
            +E++++L+E   R  G  PNV+TF+TL +G C+ G   K + +   M +  C P+K +Y
Sbjct: 202 LDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 261

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKD-------- 349
           +TL+ GL +  K+  A  +F++M +     D    NSL+ G C + S +E +        
Sbjct: 262 TTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG 321

Query: 350 ----------------------LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                                  L  A ++  +M  K    D  TY I+I  L +  K D
Sbjct: 322 GAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLD 381

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EAL       E   +   ++  + +  LC  G ID+A  +     +   +P+  ++ +L 
Sbjct: 382 EALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILS 441

Query: 448 TKLDQLEKSYDACALYGAALKQGVIPQ 474
             L +L +  DA  L   A  + +  Q
Sbjct: 442 ESLIKLGRVEDAQKLMEPAKARDITAQ 468



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 146/320 (45%), Gaps = 44/320 (13%)

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
            +  +V SL K+G L +ALEV + M    C P++ TYN L+   C  G   +A ++  ++
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 217 KNDG-LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           K +  ++PD +TY  ++ G C  G +  A +LL+E  ++ +  NV T++++     KE  
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
           P +   +L+ M    C PD  +++ ++ G  +   +  A  +++ MV  G++ D      
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNV---- 187

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
                                               +Y I+I  L K  K DE+L  L  
Sbjct: 188 ------------------------------------SYHILIHGLAKIGKLDESLKILSE 211

Query: 396 AI--EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
                 G++P  ITF+ +I  LC  G+++KAL +   M E    P++ +Y  LI  L + 
Sbjct: 212 MAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRA 271

Query: 454 EKSYDACALYGAALKQGVIP 473
           EK   A  L+   + Q  IP
Sbjct: 272 EKVIQARELF-EKMTQACIP 290


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 199/449 (44%), Gaps = 40/449 (8%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           R K   +   +++ D ++  G + +   +N L+  L    E + A +   + S  GL  +
Sbjct: 217 RCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVS 276

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           + T++ +IR +C K  F EA  +   M   G  P V T+  ++ SLC+ GR+ +A   LD
Sbjct: 277 AHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLD 336

Query: 180 QM-------------------GRIG----------------CKPNIQTYNCLLKGLCYVG 204
            M                    R+G                  P++ TYN L+ G C  G
Sbjct: 337 VMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTG 396

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            ++ A  M  ++   GL PDV T+T ++ GFC++G    A EL +E + RG+ P+ + + 
Sbjct: 397 NLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYT 456

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           T   G  K G P K  G+ + MK     PD I+Y+ L+NGL K G    A  + ++M   
Sbjct: 457 TRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLE 516

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D     S++    +       LL  A +VF  M KK       TY ++I +     
Sbjct: 517 GIVPDHVTYTSIIHAHLISG-----LLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRG 571

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + D A  +     + G  P  IT+N +I  LC E  +D A  L   M      P++ +Y 
Sbjct: 572 RLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYT 631

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
           +LI +   L+   DA  LY   L + + P
Sbjct: 632 ILINENSNLQYWQDALKLYKDMLDREIKP 660



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 175/379 (46%), Gaps = 12/379 (3%)

Query: 97  MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
           M+NE E   + +S      + P   TF+ M+   C + +   A +V+D M   G  PN  
Sbjct: 187 MVNEVE---EVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDV 243

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           ++ +LVN L   G    A E+++QM  +G K +  TYN L++G C     EEA ++   +
Sbjct: 244 SYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREM 303

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
              G  P V TY  +M   C++GR ++A   L+  +   + P++V++NTL  GY + G  
Sbjct: 304 LGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNF 363

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            + + L   ++ +N +P  ++Y+TL++G  + G +  A  +  +M++ G   D      L
Sbjct: 364 AEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTIL 423

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK--KTDEALIHLH 394
           +RG C     +   L  A ++F++M  +     P       R +G+ K     +A     
Sbjct: 424 VRGFC-----QMGNLPMAKELFDEMLSR--GLKPDCIAYTTRIVGELKLGNPSKAFGMKE 476

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
                G  P  IT+N +I  LC  G  D A  L+  M     +P   +Y  +I       
Sbjct: 477 EMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISG 536

Query: 455 KSYDACALYGAALKQGVIP 473
               A  ++   LK+G+ P
Sbjct: 537 LLRKAEEVFSDMLKKGIHP 555



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 128/267 (47%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D + K G    V  F  L+     +     A + F E  S GL P+   ++  I      
Sbjct: 406 DDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKL 465

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
            +  +A  + + M   G+ P++ T+ +L+N LCK G   +A E++ +M   G  P+  TY
Sbjct: 466 GNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTY 525

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
             ++      G + +A E+  ++   G+ P V TYT ++  +   GR + A +  +E  +
Sbjct: 526 TSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQD 585

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           +GV+PNV+T+N L  G CKE        L   M+ +   P+K +Y+ L+N        + 
Sbjct: 586 KGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQD 645

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGL 340
           A+ ++K+M+    + D    ++L++ L
Sbjct: 646 ALKLYKDMLDREIKPDSCTHSALMKHL 672



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 107/218 (49%)

Query: 56  RFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           R V  +K     +   + + +K +G    +  +N L+  L  L   + A +   +    G
Sbjct: 458 RIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEG 517

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           + P+  T++ +I  +       +A +V   M   G HP+V T+T+L++S    GRL  A 
Sbjct: 518 IVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAK 577

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           +  D+M   G  PN+ TYN L+ GLC    ++ AY +   +++ G+ P+ YTYT +++  
Sbjct: 578 KYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINEN 637

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +    +A++L  + ++R + P+  T + L     K+
Sbjct: 638 SNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKD 675



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 110/237 (46%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++FD +   G       +   ++  + L     A     E  + G  P+  T++++I   
Sbjct: 438 ELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGL 497

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +F +A +++  M   G  P+  T+T ++++   SG L++A EV   M + G  P++
Sbjct: 498 CKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSV 557

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TY  L+      GR++ A +    +++ G+ P+V TY A++ G CK    + A  L  E
Sbjct: 558 VTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAE 617

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
              +GV+PN  T+  L N           + L K M  R   PD  ++S L+  L K
Sbjct: 618 MESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSK 674



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 136/329 (41%), Gaps = 21/329 (6%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
             ++I+ +  K    +   V   M +NG  P+V     ++  L     + E  EV   M 
Sbjct: 140 LDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMI 199

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           +   +P I T+N ++   C  G V  A E+L  ++  G  P+  +Y  +++G    G  +
Sbjct: 200 KCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFD 259

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
            A EL+ +    G+  +  T+N L  G+CK+    +   L + M  R  LP  ++Y+T++
Sbjct: 260 RAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIM 319

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
             L + G++  A      MV      D    N+L+ G     +       +A  +F ++ 
Sbjct: 320 YSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYG-----YSRLGNFAEALLLFSELR 374

Query: 363 KKVSVTDPGTYGIVI----RT----LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            K  V    TY  +I    RT    + KG K D         I+ G  P  +TF  +++ 
Sbjct: 375 SKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDD--------MIKHGLCPDVVTFTILVRG 426

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            C  G +  A  L   M      P   +Y
Sbjct: 427 FCQMGNLPMAKELFDEMLSRGLKPDCIAY 455



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 157/392 (40%), Gaps = 29/392 (7%)

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA-----RKVIDCMFDNGY------ 151
           TA++FF           S T  + I     KN F +       K I+   D G       
Sbjct: 67  TALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVG 126

Query: 152 -------HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL---C 201
                    +V    +L+    K   L++ L V  +M   G  P+++  N +LK L    
Sbjct: 127 IGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKS 186

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
            V  VEE Y +++  +   ++P + T+  +MD  CK G    A+E+L+     G  PN V
Sbjct: 187 MVNEVEEVYSVMIKCQ---IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDV 243

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           ++N L NG   +G   +   L++ M          +Y+ L+ G  K      A  + +EM
Sbjct: 244 SYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREM 303

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +  G        N+++  LC         + DA +  + M  +  + D  +Y  +I    
Sbjct: 304 LGRGALPTVVTYNTIMYSLCRLGR-----VSDARRYLDVMVNEDLMPDLVSYNTLIYGYS 358

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           +     EAL+          +P  +T+N +I   C  G +D A  +   M +H   P   
Sbjct: 359 RLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVV 418

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++ +L+    Q+     A  L+   L +G+ P
Sbjct: 419 TFTILVRGFCQMGNLPMAKELFDEMLSRGLKP 450



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 4/121 (3%)

Query: 61  IKASPLKERIDI----FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           I +  ++ R+D     FD ++  G + +V  +N L+  L   N  + A   F+E  S G+
Sbjct: 564 IHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGV 623

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           +PN +T++I+I    N   + +A K+   M D    P+  T + L+  L K  +L   L 
Sbjct: 624 SPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLR 683

Query: 177 V 177
           +
Sbjct: 684 L 684


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 208/466 (44%), Gaps = 48/466 (10%)

Query: 49  PRSLQAQRFVDRIKASPLKERID-IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D +  + L +R + +F  +  +G   +   +N L+   + + + +  V+ 
Sbjct: 205 PNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQM 264

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             + S+ GL P+ +T+  ++   C  +   E    +D M +NG  P+   F I  ++  K
Sbjct: 265 LEKMSARGLKPDCYTYGSLLNYLCALS---EMHSFLDLMVENGLSPDHHIFNIFFSAYAK 321

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G + +A+++ ++M + G  PN+  Y  L+  LC +GRV++A      + N+G+ P++  
Sbjct: 322 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVV 381

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           + +++ G C V +   A EL+ E +++G+ PN V FNTL    C  G  M+G  L+ LM+
Sbjct: 382 FNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLME 441

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
                PD  SY+ L++G    G+   A  +F  MV  G    E   N+LL G C  S   
Sbjct: 442 HVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR-- 499

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPG------------------------------------ 371
              ++DAY +F +M +K  VT PG                                    
Sbjct: 500 ---IDDAYCLFREMLRK-GVT-PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDI 554

Query: 372 -TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY I++  L K    DEA          G     ITF  +I AL   G+ + A+ L   
Sbjct: 555 YTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAA 614

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           +  +  +P+  +Y ++   L +     +  +L+ A  K G  P  +
Sbjct: 615 IPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 660



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 190/385 (49%), Gaps = 5/385 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E     D + ++G +     FN    A       + A+  F++   +GL+PN   +  
Sbjct: 290 LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 349

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A    + M + G  PN+  F  LV  LC   + + A E++ +M   G
Sbjct: 350 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 409

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN   +N L+  LC VGRV E   ++  +++ G++PD ++YT ++ G+C  GR++EA 
Sbjct: 410 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAE 469

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +  +  G++P  VT+NTL +GYC          L + M ++   P  ++Y+T+L+GL
Sbjct: 470 KVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 529

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            +  +   A  ++  M+  G + D    N +L GLC     + + +++A+++F+ +  K 
Sbjct: 530 FQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLC-----KSNCVDEAFKMFQSLCSKG 584

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  T+ I+I  L KG + ++A+         G +P  +T+  V + L  EG +++  
Sbjct: 585 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFD 644

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL 450
            L   M ++   P+    + L+ +L
Sbjct: 645 SLFSAMEKNGTAPNSQMLNALVRRL 669



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 202/443 (45%), Gaps = 45/443 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDF--NDLLMALVMLNEQETAVK-FFSEASSYGLAPNSWT 122
           LK     F  I K G  W V+D   N LL  L        A+          G  P++ +
Sbjct: 114 LKHSFATFGLILKTG--WRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVS 171

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMF-DNGYH--PNVTTFTILVNSLCKSGRLKEALEVLD 179
           +SI+++ +CN+N   EA +++  M  D+G    PNV T+T +++ LCK+     A  V  
Sbjct: 172 YSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQ 231

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           QM   G KPN  TYNCL+ G   +G+ +E  +ML  +   GLKPD YTY ++++  C + 
Sbjct: 232 QMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALS 291

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
             +  ++L+   +E G++P+   FN  F+ Y K G   K + +   M++    P+ ++Y 
Sbjct: 292 EMHSFLDLM---VENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 348

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVF 358
            L++ L K G++  A   F +M+  G   +  + NSL+ GLC +  WE  +  E  Y++ 
Sbjct: 349 ALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE--ELVYEML 406

Query: 359 EK------------------------------MTKKVSV-TDPGTYGIVIRTLGKGKKTD 387
           ++                              + + V V  D  +Y  +I       +TD
Sbjct: 407 DQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTD 466

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA       + +G  P  +T+N ++   C   +ID A  L   M      P   +Y+ ++
Sbjct: 467 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 526

Query: 448 TKLDQLEKSYDACALYGAALKQG 470
             L Q ++  +A  LY   +  G
Sbjct: 527 HGLFQTKRFSEAKELYLNMINSG 549



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 153/337 (45%), Gaps = 47/337 (13%)

Query: 153 PNVTTFTILVNSLCKSGRLK-----------------------------------EALEV 177
           PN  T++IL+  LC+ GRLK                                   EA++V
Sbjct: 96  PNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDV 155

Query: 178 LDQ-MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---GLKPDVYTYTAVMD 233
           L Q M  +GC P+  +Y+ LLKG C   R EEA E+L  + ND      P+V TYT V+D
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G CK    + A  +  + I+ GV PN  T+N L +GY   G   + V +L+ M  R   P
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKP 275

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D  +Y +LLN L    ++    S    MV  G   D  + N         ++ +  +++ 
Sbjct: 276 DCYTYGSLLNYLCALSEMH---SFLDLMVENGLSPDHHIFNIFF-----SAYAKCGMIDK 327

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A  +F KM +     +   YG +I  L K  + D+A +  +  I  G  P  + FN+++ 
Sbjct: 328 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 387

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            LC   K ++A  L++ M +    P+   ++ LI  L
Sbjct: 388 GLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNL 424


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 198/407 (48%), Gaps = 5/407 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +   D +   G   +   +  L+  +  + +   A+KF  +       P+   ++ 
Sbjct: 145 VKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNT 204

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      EA  +   M   G   +V T+  L+   C  G+LKEA+ +L++M    
Sbjct: 205 IIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKT 264

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ TYN L+  LC  G+V+EA  +L  +    +KPDV TY+ +MDG+  V    +A 
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + N     GVTP+V T+  L NG+CK     + + L K M ++N +P  ++YS+L++GL
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I     +  EM   G   D    +SL+ GLC         L+ A  +F KM  + 
Sbjct: 385 CKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGH-----LDRAIALFNKMKDQE 439

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  T+ I++  L KG +  +A       +  G+     T+N +I   C +G +++AL
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            +L  M ++  IP+  +++ +I  L + +++  A  L    + +G++
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 181/389 (46%), Gaps = 5/389 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  FN +L +   +    TAV         G+ P+  T +I+I C+C+         V+ 
Sbjct: 59  IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY P+  T   L+  LC  G++K+AL   D++   G + N  +Y  L+ G+C +G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A + L  +     KPDV  Y  ++D  CK    +EA  L +E   +G++ +VVT+N
Sbjct: 179 DTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYN 238

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL  G+C  G   + +GLL  M  +   P+  +Y+ L++ L K GK++ A S+   M++ 
Sbjct: 239 TLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA 298

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             + D    ++L+ G  +  +E K     A  VF  M+      D  TY I+I    K K
Sbjct: 299 CVKPDVITYSTLMDGYFL-VYEVK----KAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             DEAL       +   +P  +T++++I  LC  G+I     L+  M +  +     +Y 
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYS 413

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            LI  L +      A AL+     Q + P
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQEIRP 442



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 144/280 (51%), Gaps = 1/280 (0%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP        VD + K   +KE   +   + K      V  ++ L+    ++ E + A  
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQH 325

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F+  S  G+ P+  T++I+I  +C      EA  +   M      P + T++ L++ LC
Sbjct: 326 VFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC 385

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSGR+    +++D+M   G   ++ TY+ L+ GLC  G ++ A  +   +K+  ++P+++
Sbjct: 386 KSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIF 445

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+T ++DG CK GR  +A E+  + + +G   NV T+N + NG+CK+G   + + +L  M
Sbjct: 446 TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKM 505

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
           +   C+P+  ++ T++  L K  +   A  + ++M+  G 
Sbjct: 506 EDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 30/262 (11%)

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A+   N  +    TP ++ FN + + + K       V L   ++ +   PD I+ + L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK------DLLEDAY 355
           +N     G+I    S+  ++++ G+  D   +N+L++GLC+K   +K       LL   +
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 356 QV------------------------FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
           Q+                          K+  +++  D   Y  +I  + K +   EA  
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
                   G     +T+N +I   C  GK+ +A+ LL  M      P+  +Y++L+  L 
Sbjct: 221 LFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           +  K  +A ++    LK  V P
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKP 302


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 141/260 (54%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           N +V  FN L+ A     +   A   F+     G  P+  TF+ +I  +C   +  EARK
Sbjct: 291 NPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARK 350

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           + D +F+ G  P+V ++TIL+   CK  R+ EA+ + ++M       +I  Y+ L+ GLC
Sbjct: 351 LFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLC 410

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             GR+  A+E+   + NDG  P+V TY  ++D FCK+   +  +EL      +G+TP V+
Sbjct: 411 KSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVL 470

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+N L NGYCK     + + LL +M+ +N  PD I+Y++L +GL K G+I  A  +FK M
Sbjct: 471 TYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVM 530

Query: 322 VRFGFEVDERMMNSLLRGLC 341
              G  VD    N LL   C
Sbjct: 531 HVGGPPVDVATYNVLLDAFC 550



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 189/425 (44%), Gaps = 40/425 (9%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV  FN ++ ++V +     A+    +    G+ P+ +T SI I CYC+  +   A  V+
Sbjct: 83  SVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVL 142

Query: 144 DCMFDNGYHPNVTTFT-----------------------------------ILVNSLCKS 168
             +   GY PN  T T                                    L+N LCK 
Sbjct: 143 GIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKI 202

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           GR  +A ++L +M     KPNI  YN ++   C      +A ++ + + + G+ PD+ TY
Sbjct: 203 GRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTY 262

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           T+++ GFC+ G+  E  +L+ E + + + PNV TFN L + +C++G  ++  G+  LM K
Sbjct: 263 TSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVK 322

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           R   PD ++++TL++G    G +  A  +F  +   G   D      L+ G C     + 
Sbjct: 323 RGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYC-----KC 377

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             +++A  +F +M  K  V D   Y  +I  L K  +   A          G  P  IT+
Sbjct: 378 KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITY 437

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           N +I A C    ID  + L  LM      P+  +Y++LI    + ++  +A  L      
Sbjct: 438 NILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQS 497

Query: 469 QGVIP 473
           + + P
Sbjct: 498 KNLAP 502



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 151/314 (48%), Gaps = 5/314 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D++  I   G +  +  +  L+       +     +   E  +  + PN +TF+++I  +
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C K    EA+ + + M   G  P++ TF  L++  C  G + EA ++ D +   G  P++
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y  L+ G C   R++EA  +   ++   +  D+  Y++++DG CK GR + A EL + 
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 424

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G  PNV+T+N L + +CK      G+ L KLM  +   P  ++Y+ L+NG  K  +
Sbjct: 425 INNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKR 484

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           IR A+++   M       D    NSL  GLC     +   + DA+++F+ M       D 
Sbjct: 485 IREAMNLLSVMQSKNLAPDSITYNSLFDGLC-----KSGRISDAWELFKVMHVGGPPVDV 539

Query: 371 GTYGIVIRTLGKGK 384
            TY +++    K +
Sbjct: 540 ATYNVLLDAFCKAQ 553



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 182/394 (46%), Gaps = 8/394 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +++ +D  D++   G       +  L+  L  +     A +   E     + PN   +++
Sbjct: 170 VQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNM 229

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C      +AR +   + D G  P++ T+T L+   C++G+  E  +++ +M    
Sbjct: 230 IIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKN 289

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN+ T+N L+   C  G++ EA  M   +   G +PD+ T+  ++ G C  G   EA 
Sbjct: 290 INPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEAR 349

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L +   ERG+ P+V ++  L  GYCK     + V L   M+ +N + D + YS+L++GL
Sbjct: 350 KLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGL 409

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I  A  +F  +   G   +    N L+   C    ++ D+     ++F+ M  K 
Sbjct: 410 CKSGRISYAWELFSTINNDGPPPNVITYNILIDAFC--KIQDIDM---GIELFKLMCGKG 464

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
                 TY I+I    K K+  EA+  L         P +IT+N++   LC  G+I  A 
Sbjct: 465 LTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAW 524

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
            L  +M+         +Y++L   LD   K+ D 
Sbjct: 525 ELFKVMHVGGPPVDVATYNVL---LDAFCKAQDV 555



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/411 (23%), Positives = 183/411 (44%), Gaps = 40/411 (9%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
            N  + AV  F+   +    P+   F+ +I           A  ++  M   G  P++ T
Sbjct: 62  FNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFT 121

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
            +I +N  C  G +  A  VL  + + G +PN  T   ++KGLC  G V++A +   NV 
Sbjct: 122 LSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVA 181

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE--------------------------- 250
             G+  D   Y  +++G CK+GRS +A +LL E                           
Sbjct: 182 AQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTC 241

Query: 251 --------AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
                    ++ G+ P+++T+ +L  G+C+ G   +   L+  M  +N  P+  +++ L+
Sbjct: 242 KARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLI 301

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +   + GK+  A  +F  MV+ G + D    N+L+ G C+      ++LE A ++F+ + 
Sbjct: 302 DAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHG----NVLE-ARKLFDTVF 356

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           ++  + D  +Y I+I    K K+ DEA+   +       +   + ++++I  LC  G+I 
Sbjct: 357 ERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRIS 416

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            A  L   +      P+  +Y++LI    +++       L+     +G+ P
Sbjct: 417 YAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTP 467



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 86/176 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F+ ++       +  ++ L+  L        A + FS  ++ G  PN  
Sbjct: 376 KCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVI 435

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I  +C   D     ++   M   G  P V T+ IL+N  CKS R++EA+ +L  M
Sbjct: 436 TYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVM 495

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
                 P+  TYN L  GLC  GR+ +A+E+   +   G   DV TY  ++D FCK
Sbjct: 496 QSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 551


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 178/359 (49%), Gaps = 5/359 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L +  ++F+ +  DG       FN L+ A       + A   F+E    G+ P+  T+S 
Sbjct: 372 LVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYST 431

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A +  + M D G  P+++T+  L+   C  G L +A +++ QM   G
Sbjct: 432 VIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKG 491

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +P+I  +N ++  LC +GRV +A  +     + GL P+V  Y  +MDG+C VG+   A+
Sbjct: 492 MRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENAL 551

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + +  +  G+ PNVV + TL NGYCK G   +G+ L + +  +   P    Y+ +L+GL
Sbjct: 552 RVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGL 611

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G+  PA   F EM   G  +D    + +L GL   S  ++ +L   ++    M  K+
Sbjct: 612 FQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAIL--LFKELHAMNVKI 669

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            +T   T  I+I  + + ++ +EA          G +P  +T++ ++  L  EG +++A
Sbjct: 670 DIT---TLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEA 725



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/437 (24%), Positives = 197/437 (45%), Gaps = 40/437 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  D+F+ + + G +  +S +N ++ AL      + A     +    G+ P++W
Sbjct: 228 KEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNW 287

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  Y +   + EA +V   M   G  P+V T   L+ SLCK G++K+A +V D M
Sbjct: 288 TYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSM 347

Query: 182 GRIGCK-----------------------------------PNIQTYNCLLKGLCYVGRV 206
              G K                                   P+   +N L+K     G +
Sbjct: 348 AMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGML 407

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           + A  +   ++  G++PDV TY+ V+   C++G+ ++A+E  N+ I++GV P++ T++ L
Sbjct: 408 DRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFL 467

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             G+C  G  +K   L+  M  +   PD   ++ ++N L K G++  A +IF   +  G 
Sbjct: 468 IQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGL 527

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             +  + N+L+ G C+        +E+A +VF+ M       +   YG ++    K  + 
Sbjct: 528 HPNVMVYNTLMDGYCLVGK-----MENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRI 582

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           DE L      +  G  P T  +N ++  L   G+   A +    M E      R +Y ++
Sbjct: 583 DEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIV 642

Query: 447 ITKLDQLEKSYDACALY 463
           +  L +   S +A  L+
Sbjct: 643 LGGLFKNSCSDEAILLF 659



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 166/347 (47%), Gaps = 10/347 (2%)

Query: 105 VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI-DCMFDNGYHPNVTTFTILVN 163
           + FF +    GL  ++   S ++R  C      EA  ++   M   G  P+V ++ I++ 
Sbjct: 128 LAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLK 187

Query: 164 SLC---KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           SLC   KSG+  E L ++ + G + C PN   YN ++ G    G V +A ++   +   G
Sbjct: 188 SLCSDRKSGQADELLRMMAEGGAV-CLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRG 246

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + PD+ TY  V++  CK    ++A  +L + +++GV P+  T+N+L  GY   G   + V
Sbjct: 247 ISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAV 306

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            + K M  +  LPD ++ ++L+  L K GKI+ A  +F  M   G + D      +L G 
Sbjct: 307 RVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNG- 365

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
               +  K  L D  ++F  M       D   + ++I+   K    D A I  +   E G
Sbjct: 366 ----YATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQG 421

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             P  +T++ VI ALC  GK+D A+     M +    PS ++Y  LI
Sbjct: 422 VEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLI 468



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 174/371 (46%), Gaps = 5/371 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F+E    G++P+  T++ ++   C      +A  ++  M D G  P+  T+  L+ 
Sbjct: 235 ACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIY 294

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
               +G+ KEA+ V  +M   G  P++ T N L+  LC  G++++A ++  ++   G K 
Sbjct: 295 GYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKT 354

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D+++Y  +++G+   G   +  EL N  +  G+ P+   FN L   Y K G   +   + 
Sbjct: 355 DIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIF 414

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M+++   PD ++YST++  L + GK+  AV  F +M+  G        + L++G C  
Sbjct: 415 NEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFC-- 472

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                DLL+    V + M K +   D G +  +I  L K  +  +A       I +G  P
Sbjct: 473 --THGDLLKAKDLVLQMMNKGMR-PDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHP 529

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             + +N ++   C  GK++ AL +  +M      P+   Y  L+    ++ +  +  +L+
Sbjct: 530 NVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLF 589

Query: 464 GAALKQGVIPQ 474
              L +G+ P 
Sbjct: 590 REILHKGIKPS 600



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 164/364 (45%), Gaps = 51/364 (14%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P + T+ IL++   ++ R K  L    Q+ + G   +    + LL+GLC   R  EA ++
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDI 165

Query: 213 LMN-VKNDGLKPDVYT-------------------------------------YTAVMDG 234
           L++ + + G  PDV++                                     Y  V+DG
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           F K G  N+A +L NE ++RG++P++ T+N + N  CK     K   +L+ M  +  LPD
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
             +Y++L+ G    G+ + AV + K+M   G   D   +NSL+  LC     +   ++DA
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLC-----KHGKIKDA 340

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNN 410
             VF+ M  K   TD  +Y I++     G  T   L+ L     +    G  P +  FN 
Sbjct: 341 RDVFDSMAMKGQKTDIFSYKIML----NGYATKGCLVDLTELFNLMLSDGIAPDSHIFNV 396

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I+A    G +D+A ++   M E    P   +Y  +I  L ++ K  DA   +   + QG
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456

Query: 471 VIPQ 474
           V P 
Sbjct: 457 VAPS 460



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 115/291 (39%), Gaps = 43/291 (14%)

Query: 221 LKPDVYTYTAVMD-----------------------------------GFCKVGRSNEAM 245
           L P ++TY  +MD                                   G C+  R+ EA+
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163

Query: 246 E-LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN--CLPDKISYSTLL 302
           + LL+     G  P+V ++  +    C +    +   LL++M +    CLP+ ++Y+T++
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +G  K G +  A  +F EMV+ G   D    N ++  LC     +K     A  +  +M 
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDK-----AEAILRQMV 278

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            K  + D  TY  +I       +  EA+         G +P  +T N+++ +LC  GKI 
Sbjct: 279 DKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIK 338

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            A  +   M    +     SY +++          D   L+   L  G+ P
Sbjct: 339 DARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAP 389


>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 197/368 (53%), Gaps = 10/368 (2%)

Query: 66  LKERI-DIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFF-SEASSYGLAPNSWT 122
           L ER+ ++FD+I+       S+   +  L  LV  N+ +   KF  +   S  L PN+  
Sbjct: 143 LHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCI 202

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGY-HPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           F+I+++ +C   D   A +V++ M  +   +PN+ T++ L+N LC SGRLKEA+E+ ++M
Sbjct: 203 FNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEM 262

Query: 182 -GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             +    P+  TYN L+ G C+  +V+ A +++  +K +G  P+V+ Y+A+M+GFCK GR
Sbjct: 263 VSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGR 322

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA E+ +E    G+ P+ V + TL N +C+ G   + + LLK M++  C  D ++++ 
Sbjct: 323 LEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNV 382

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +L GL + G+   A  + + +   G  +++     +L  LC +       L+ A Q+   
Sbjct: 383 ILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGE-----LQKATQLVGL 437

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +  +    T   ++  L +  K  +A++ L   +E+G  P   ++  +++ +C E K
Sbjct: 438 MLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERK 497

Query: 421 IDKALLLL 428
           +  A  LL
Sbjct: 498 LLPAFELL 505



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 151/297 (50%), Gaps = 7/297 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK-PNIQTYNCLLKGLCYVGRVEEAYE 211
           PN   F ILV   CK+G +  A EV+++M +     PN+ TY+ L+ GLC  GR++EA E
Sbjct: 198 PNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIE 257

Query: 212 MLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           +    V  D + PD  TY A+++GFC   + + A++++    + G  PNV  ++ L NG+
Sbjct: 258 LFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGF 317

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CKEG   +   +   MK     PD + Y+TL+N   + G++  A+ + K+M       D 
Sbjct: 318 CKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADT 377

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N +L GLC +        E+A  + E++  +    +  +Y IV+ +L +  +  +A 
Sbjct: 378 VTFNVILGGLCREGR-----FEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKAT 432

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             +   +  G +P   T N ++  LC  GK+  A++ L  + E    P   S+ +L+
Sbjct: 433 QLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLV 489



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 159/325 (48%), Gaps = 8/325 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
           P++   +  +N L +S ++    + +L+    +  +PN   +N L+K  C  G ++ A+E
Sbjct: 162 PSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFE 221

Query: 212 MLMNVKNDGLK-PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG-VTPNVVTFNTLFNG 269
           ++  +K   +  P++ TY+ +++G C  GR  EA+EL  E + +  + P+ +T+N L NG
Sbjct: 222 VVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALING 281

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           +C      + + +++ MKK  C P+  +YS L+NG  K G++  A  +F EM   G + D
Sbjct: 282 FCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPD 341

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                +L+   C         +++A ++ + M +     D  T+ +++  L +  + +EA
Sbjct: 342 TVGYTTLINFFCRAGR-----VDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEA 396

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
              L      G      ++  V+ +LC EG++ KA  L+ LM     +P   + + L+  
Sbjct: 397 RGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVH 456

Query: 450 LDQLEKSYDACALYGAALKQGVIPQ 474
           L +  K  DA       L+ G  P+
Sbjct: 457 LCEAGKVGDAVMALLGLLELGFKPE 481



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 132/262 (50%), Gaps = 9/262 (3%)

Query: 66  LKERIDIFDS-IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           LKE I++F+  + KD        +N L+       + + A+K        G  PN + +S
Sbjct: 252 LKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYS 311

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            ++  +C +    EA++V D M   G  P+   +T L+N  C++GR+ EA+E+L  M   
Sbjct: 312 ALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMREN 371

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
            C+ +  T+N +L GLC  GR EEA  ML  +  +G+  +  +Y  V++  C+ G   +A
Sbjct: 372 KCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKA 431

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEG----TPMKGVGLLKLMKKRNCLPDKISYST 300
            +L+   + RGV P+  T N L    C+ G      M  +GLL+L  K    P+  S++ 
Sbjct: 432 TQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFK----PEPNSWAL 487

Query: 301 LLNGLLKWGKIRPAVSIFKEMV 322
           L+  + +  K+ PA  +  ++V
Sbjct: 488 LVELICRERKLLPAFELLDDLV 509



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 164/365 (44%), Gaps = 46/365 (12%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC----------------------- 186
           G+  N  T+  +++ L KS + +    VL QM    C                       
Sbjct: 88  GFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERV 147

Query: 187 -------------KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVM 232
                        KP+++  +  L  L    +V+   + L+N K    L+P+   +  ++
Sbjct: 148 VEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILV 207

Query: 233 DGFCKVGRSNEAMELLNEAIERGVT-PNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRN 290
              CK G  + A E++ E  +  V+ PN++T++TL NG C  G   + + L  +++ K  
Sbjct: 208 KHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQ 267

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
            LPD ++Y+ L+NG     K+  A+ I + M + G   +    ++L+ G C     ++  
Sbjct: 268 ILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFC-----KEGR 322

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           LE+A +VF++M       D   Y  +I    +  + DEA+  L    E      T+TFN 
Sbjct: 323 LEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNV 382

Query: 411 VIQALCGEGKIDKAL-LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           ++  LC EG+ ++A  +L  L YE   + ++ SY +++  L +  +   A  L G  L +
Sbjct: 383 ILGGLCREGRFEEARGMLERLPYEGVYL-NKASYRIVLNSLCREGELQKATQLVGLMLGR 441

Query: 470 GVIPQ 474
           GV+P 
Sbjct: 442 GVLPH 446



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 95/191 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E  ++FD +K  G       +  L+         + A++   +        ++ 
Sbjct: 319 KEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTV 378

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF++++   C +  F EAR +++ +   G + N  ++ I++NSLC+ G L++A +++  M
Sbjct: 379 TFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLM 438

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  T N LL  LC  G+V +A   L+ +   G KP+  ++  +++  C+  + 
Sbjct: 439 LGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKL 498

Query: 242 NEAMELLNEAI 252
             A ELL++ +
Sbjct: 499 LPAFELLDDLV 509


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 198/412 (48%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           + S +   + +   + K G   S+   + LL           AV    +    G  P++ 
Sbjct: 94  RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 153

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I      N   EA  ++D M   G  PN+ T+ ++VN LCK G    AL +L++M
Sbjct: 154 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 213

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                + ++  +N ++  LC    V++A  +   ++  G++P+V TY++++   C  GR 
Sbjct: 214 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 273

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A +LL++ IE+ + PN+VTFN L + + KEG  ++   L   M KR+  PD  +Y++L
Sbjct: 274 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 333

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG     ++  A  +F+ MV      D    N+L++G C     +   +ED  ++F +M
Sbjct: 334 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC-----KSKRVEDGTELFREM 388

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           + +  V D  TY  +I+ L      D A       +  G  P  +T++ ++  LC  GK+
Sbjct: 389 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 448

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +KAL +   M +         Y  +I  + +  K  D   L+ +   +GV P
Sbjct: 449 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 500



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 182/375 (48%), Gaps = 8/375 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+      ++   A+    +    G  P+  T S ++  YC+     +A  ++D M 
Sbjct: 85  YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 144

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + GY P+  TFT L++ L    +  EA+ ++D+M + GC+PN+ TY  ++ GLC  G  +
Sbjct: 145 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 204

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A  +L  ++   ++ DV  +  ++D  CK    ++A+ L  E   +G+ PNVVT+++L 
Sbjct: 205 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 264

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +  C  G       LL  M ++   P+ ++++ L++  +K GK   A  ++ +M++   +
Sbjct: 265 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 324

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    NSL+ G CM      D L+ A Q+FE M  K    D  TY  +I+   K K+ +
Sbjct: 325 PDIFTYNSLVNGFCM-----HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 379

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +           G +  T+T+  +IQ L  +G  D A  +   M      P   +Y +L+
Sbjct: 380 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 439

Query: 448 TKL---DQLEKSYDA 459
             L    +LEK+ + 
Sbjct: 440 DGLCNNGKLEKALEV 454



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 198/409 (48%), Gaps = 7/409 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + + D + + G       F  L+  L + N+   AV         G  PN  T+ +
Sbjct: 133 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 192

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C + D   A  +++ M       +V  F  +++SLCK   + +AL +  +M   G
Sbjct: 193 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 252

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+ TY+ L+  LC  GR  +A ++L ++    + P++ T+ A++D F K G+  EA 
Sbjct: 253 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 312

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L ++ I+R + P++ T+N+L NG+C      K   + + M  ++C PD ++Y+TL+ G 
Sbjct: 313 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 372

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++     +F+EM   G   D     +L++GL    + + D  ++A +VF++M    
Sbjct: 373 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL----FHDGD-CDNAQKVFKQMVSDG 427

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKA 424
              D  TY I++  L    K ++AL  +   ++   I   I  +  +I+ +C  GK+D  
Sbjct: 428 VPPDIMTYSILLDGLCNNGKLEKAL-EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 486

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L   +      P+  +Y+ +I+ L       +A AL     + G +P
Sbjct: 487 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 535



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 7/337 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN ++ +L      + A+  F E  + G+ PN  T+S +I C C+   + +A +++  M 
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +   +PN+ TF  L+++  K G+  EA ++ D M +    P+I TYN L+ G C   R++
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A +M   + +    PDV TY  ++ GFCK  R  +  EL  E   RG+  + VT+ TL 
Sbjct: 345 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 404

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G   +G       + K M      PD ++YS LL+GL   GK+  A+ +F  M +   +
Sbjct: 405 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 464

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           +D  +  +++ G+C     +   ++D + +F  ++ K    +  TY  +I  L   +   
Sbjct: 465 LDIYIYTTMIEGMC-----KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 519

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           EA   L    E G +P + T+N +I+A   +G  DKA
Sbjct: 520 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG--DKA 554



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 144/291 (49%), Gaps = 1/291 (0%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           ++ AS   ++ ++ K NP  +     +D  +K     E   ++D + K   +  +  +N 
Sbjct: 273 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 332

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    M +  + A + F    S    P+  T++ +I+ +C      +  ++   M   G
Sbjct: 333 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 392

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +  T+T L+  L   G    A +V  QM   G  P+I TY+ LL GLC  G++E+A 
Sbjct: 393 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 452

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E+   ++   +K D+Y YT +++G CK G+ ++  +L      +GV PNVVT+NT+ +G 
Sbjct: 453 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 512

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           C +    +   LLK MK+   LP+  +Y+TL+   L+ G    +  + +EM
Sbjct: 513 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 40/358 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + +++F  ++  G   +V  ++ L+  L        A +  S+     + PN  
Sbjct: 234 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 293

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +  +  F EA K+ D M      P++ T+  LVN  C   RL +A ++ + M
Sbjct: 294 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 353

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN----------------------- 218
               C P++ TYN L+KG C   RVE+  E+   + +                       
Sbjct: 354 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 413

Query: 219 ------------DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                       DG+ PD+ TY+ ++DG C  G+  +A+E+ +   +  +  ++  + T+
Sbjct: 414 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 473

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             G CK G    G  L   +  +   P+ ++Y+T+++GL     ++ A ++ K+M   G 
Sbjct: 474 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 533

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             +    N+L+R        + D    A ++  +M     V D  T G+V   L  G+
Sbjct: 534 LPNSGTYNTLIRA----HLRDGDKAASA-ELIREMRSCRFVGDASTIGLVANMLHDGR 586



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 144/304 (47%), Gaps = 5/304 (1%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +L +A+ +   M +    P+I  +N LL  +  + + +    +   ++   +   +YTY 
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++ FC+  + + A+ LL + ++ G  P++VT ++L NGYC        V L+  M + 
Sbjct: 87  ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD I+++TL++GL    K   AV++   MV+ G + +      ++ GLC +   + D
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG--DTD 204

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
           L   A  +  KM       D   +  +I +L K +  D+AL         G  P  +T++
Sbjct: 205 L---ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 261

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           ++I  LC  G+   A  LL  M E    P+  +++ LI    +  K  +A  LY   +K+
Sbjct: 262 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 321

Query: 470 GVIP 473
            + P
Sbjct: 322 SIDP 325


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 198/412 (48%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           + S +   + +   + K G   S+   + LL           AV    +    G  P++ 
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I      N   EA  ++D M   G  PN+ T+ ++VN LCK G    AL +L++M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                + ++  +N ++  LC    V++A  +   ++  G++P+V TY++++   C  GR 
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A +LL++ IE+ + PN+VTFN L + + KEG  ++   L   M KR+  PD  +Y++L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NG     ++  A  +F+ MV      D    N+L++G C     +   +ED  ++F +M
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC-----KSKRVEDGTELFREM 426

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           + +  V D  TY  +I+ L      D A       +  G  P  +T++ ++  LC  GK+
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +KAL +   M +         Y  +I  + +  K  D   L+ +   +GV P
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 182/375 (48%), Gaps = 8/375 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+      ++   A+    +    G  P+  T S ++  YC+     +A  ++D M 
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + GY P+  TFT L++ L    +  EA+ ++D+M + GC+PN+ TY  ++ GLC  G  +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A  +L  ++   ++ DV  +  ++D  CK    ++A+ L  E   +G+ PNVVT+++L 
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +  C  G       LL  M ++   P+ ++++ L++  +K GK   A  ++ +M++   +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D    NSL+ G CM      D L+ A Q+FE M  K    D  TY  +I+   K K+ +
Sbjct: 363 PDIFTYNSLVNGFCM-----HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +           G +  T+T+  +IQ L  +G  D A  +   M      P   +Y +L+
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477

Query: 448 TKL---DQLEKSYDA 459
             L    +LEK+ + 
Sbjct: 478 DGLCNNGKLEKALEV 492



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 198/409 (48%), Gaps = 7/409 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + + D + + G       F  L+  L + N+   AV         G  PN  T+ +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C + D   A  +++ M       +V  F  +++SLCK   + +AL +  +M   G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN+ TY+ L+  LC  GR  +A ++L ++    + P++ T+ A++D F K G+  EA 
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L ++ I+R + P++ T+N+L NG+C      K   + + M  ++C PD ++Y+TL+ G 
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++     +F+EM   G   D     +L++GL    + + D  ++A +VF++M    
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL----FHDGD-CDNAQKVFKQMVSDG 465

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKA 424
              D  TY I++  L    K ++AL  +   ++   I   I  +  +I+ +C  GK+D  
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKAL-EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L   +      P+  +Y+ +I+ L       +A AL     + G +P
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 573



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 7/337 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN ++ +L      + A+  F E  + G+ PN  T+S +I C C+   + +A +++  M 
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +   +PN+ TF  L+++  K G+  EA ++ D M +    P+I TYN L+ G C   R++
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A +M   + +    PDV TY  ++ GFCK  R  +  EL  E   RG+  + VT+ TL 
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G   +G       + K M      PD ++YS LL+GL   GK+  A+ +F  M +   +
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           +D  +  +++ G+C     +   ++D + +F  ++ K    +  TY  +I  L   +   
Sbjct: 503 LDIYIYTTMIEGMC-----KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           EA   L    E G +P + T+N +I+A   +G  DKA
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG--DKA 592



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 144/291 (49%), Gaps = 1/291 (0%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           ++ AS   ++ ++ K NP  +     +D  +K     E   ++D + K   +  +  +N 
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    M +  + A + F    S    P+  T++ +I+ +C      +  ++   M   G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +  T+T L+  L   G    A +V  QM   G  P+I TY+ LL GLC  G++E+A 
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E+   ++   +K D+Y YT +++G CK G+ ++  +L      +GV PNVVT+NT+ +G 
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           C +    +   LLK MK+   LP+  +Y+TL+   L+ G    +  + +EM
Sbjct: 551 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 40/358 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + +++F  ++  G   +V  ++ L+  L        A +  S+     + PN  
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +  +  F EA K+ D M      P++ T+  LVN  C   RL +A ++ + M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN----------------------- 218
               C P++ TYN L+KG C   RVE+  E+   + +                       
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451

Query: 219 ------------DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                       DG+ PD+ TY+ ++DG C  G+  +A+E+ +   +  +  ++  + T+
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             G CK G    G  L   +  +   P+ ++Y+T+++GL     ++ A ++ K+M   G 
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             +    N+L+R        + D    A ++  +M     V D  T G+V   L  G+
Sbjct: 572 LPNSGTYNTLIRA----HLRDGDKAASA-ELIREMRSCRFVGDASTIGLVANMLHDGR 624



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 144/304 (47%), Gaps = 5/304 (1%)

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +L +A+ +   M +    P+I  +N LL  +  + + +    +   ++   +   +YTY 
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++ FC+  + + A+ LL + ++ G  P++VT ++L NGYC        V L+  M + 
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD I+++TL++GL    K   AV++   MV+ G + +      ++ GLC +   + D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG--DTD 242

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
           L   A  +  KM       D   +  +I +L K +  D+AL         G  P  +T++
Sbjct: 243 L---ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           ++I  LC  G+   A  LL  M E    P+  +++ LI    +  K  +A  LY   +K+
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359

Query: 470 GVIP 473
            + P
Sbjct: 360 SIDP 363



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 132/308 (42%), Gaps = 28/308 (9%)

Query: 188 PNIQTYNCLLKGLCYVGRV-----EEAYEMLMNVKND-------GL---------KPDVY 226
           P I   +  L G+CY GR       +  E+L N  +D       GL          P + 
Sbjct: 27  PRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIV 86

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            +  ++    K+ + +  + L  +     +   + T+N L N +C+       + LL  M
Sbjct: 87  EFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            K    P  ++ S+LLNG     +I  AV++  +MV  G+  D     +L+ GL + +  
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRT 405
                 +A  + ++M ++    +  TYG+V+  L K   TD AL +L + +E   I    
Sbjct: 207 -----SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL-NLLNKMEAAKIEADV 260

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           + FN +I +LC    +D AL L   M      P+  +Y  LI+ L    +  DA  L   
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320

Query: 466 ALKQGVIP 473
            +++ + P
Sbjct: 321 MIEKKINP 328


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 188/404 (46%), Gaps = 9/404 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F   K DG   ++   N LL  LV  N  +     F     +G  PN  T++IM+  +C
Sbjct: 158 VFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFC 217

Query: 132 N----KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                  D   A +++  ++ +G  PNV T+   +  LCK G    A  ++  + R    
Sbjct: 218 RGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQP 277

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            N   +N ++ GLC  G ++EA E+   +KN G+ PDVY+Y+ ++DGFC+ GR ++A E+
Sbjct: 278 LNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEV 337

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E    G+ PN+ +++ L +G+CKEG   K + + + MK    LPD  SYS L++G  +
Sbjct: 338 FKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCR 397

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G +  A+  ++EM    F        SL++G     + +     +A + F  M K    
Sbjct: 398 KGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKG-----YYKSKQFANALKEFRIMQKLGMW 452

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D      ++    +    ++AL       E G      ++N  I  +C     +KAL L
Sbjct: 453 PDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQL 512

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           L +M +   +P   +Y  LI+   +   S  A  L+    K G+
Sbjct: 513 LPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGI 556



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 184/389 (47%), Gaps = 10/389 (2%)

Query: 90  DLLMALVMLNEQ-ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           D+L+ +   N   E A   F  A   G+  N  + + +++C    N     R + + +  
Sbjct: 140 DMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIK 199

Query: 149 NGYHPNVTTFTILVNSLCK----SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            G  PN+ T+TI++N  C+    S  ++ A E+L ++   G  PN+ TY   +KGLC VG
Sbjct: 200 FGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVG 259

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A+ ++ N+       + + + AV+ G C+ G  +EA E+  E    G+ P+V +++
Sbjct: 260 LFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYS 319

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +G+C++G   +   + K M+    LP+  SYS L++G  K G++  A+ +F+EM   
Sbjct: 320 ILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNS 379

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D    + L+ G C      K  ++ A + +E+MT          Y  +I+   K K
Sbjct: 380 GILPDVYSYSILIDGFC-----RKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSK 434

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           +   AL       ++G  P TI  N+++   C +   +KAL L     E+    +  SY+
Sbjct: 435 QFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYN 494

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
             I ++ +      A  L    LK+ V+P
Sbjct: 495 EFIHRICRGSVPEKALQLLPVMLKRNVLP 523



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 192/455 (42%), Gaps = 76/455 (16%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN ++  L      + A + F E  + G+ P+ +++SI+I  +C K    +A +V   M 
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           ++G  PN+ +++IL++  CK GR+ +ALEV ++M   G  P++ +Y+ L+ G C  G ++
Sbjct: 343 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 402

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGF-------------------------------- 235
            A +    + ++   P  + Y +++ G+                                
Sbjct: 403 SAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHIL 462

Query: 236 ---CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
              C+    N+A+ L  +  E GV  N  ++N   +  C+   P K + LL +M KRN L
Sbjct: 463 SIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVL 522

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG--FEV---------------------- 328
           PD ++YSTL++   K      AV +F +M + G  F V                      
Sbjct: 523 PDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRL 582

Query: 329 -----------DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
                      D+    SL+ G C         +  A  +F++M+++    +  TY   I
Sbjct: 583 FKGMKESRVYPDQIAYTSLVAGFC-----NTGEMTRARALFDEMSREGCSPNVVTYTCFI 637

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK- 436
               K  K ++A        E G  P  I +  +I A C  G++++A  L   M +  + 
Sbjct: 638 NEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRC 697

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
            P+   Y  LI    +L K   A  LY     +G+
Sbjct: 698 TPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 179/401 (44%), Gaps = 22/401 (5%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNSWTFSIMIRCYCN--KNDFFE 138
           NW V+         V ++  E ++  FS    +Y LA  SW   I+IR      K +  +
Sbjct: 63  NWGVAR-EIKFKGCVQIHGFENSINSFSIIIHTYALAGMSWEVFILIRDIVTFYKEENRD 121

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A +++  + D     +   F +L+     +  L+ A  V  +    G + NI + N LLK
Sbjct: 122 AGELVSLLLD--VEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLK 179

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK-VGRS---NEAMELLNEAIER 254
            L    RV+    +   +   G +P+++TYT +M+ FC+ VG S     A E+L +    
Sbjct: 180 CLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMS 239

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           G TPNVVT+ T   G CK G       L++ + ++N   +   ++ ++ GL + G +  A
Sbjct: 240 GETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEA 299

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
             +FKEM   G   D    + L+ G C      K  ++ A +VF++M     + +  +Y 
Sbjct: 300 SEVFKEMKNSGILPDVYSYSILIDGFC-----RKGRVDQASEVFKEMRNSGILPNIYSYS 354

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
           I+I    K  + D+AL         G +P   +++ +I   C +G +D A+     M  +
Sbjct: 355 ILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSN 414

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
              PS  +Y  LI       K Y     +  ALK+  I Q+
Sbjct: 415 NFSPSAFNYCSLI-------KGYYKSKQFANALKEFRIMQK 448



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 116/249 (46%), Gaps = 1/249 (0%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           +  +++G +++   +N+ +  +   +  E A++         + P+   +S +I C+  +
Sbjct: 479 EKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKR 538

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
            +  +A  +   M   G   NV T+TIL+N      ++  A  +   M      P+   Y
Sbjct: 539 LNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAY 598

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
             L+ G C  G +  A  +   +  +G  P+V TYT  ++ + K+ ++N+A +L  +  E
Sbjct: 599 TSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKE 658

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN-CLPDKISYSTLLNGLLKWGKIR 312
           RGV P+ + +  L   +C  G   +   L   MK+   C P+ + Y+ L+N  +K  K  
Sbjct: 659 RGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRD 718

Query: 313 PAVSIFKEM 321
            A  +++EM
Sbjct: 719 QAEKLYEEM 727



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 88/187 (47%), Gaps = 1/187 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  + K G  ++V  +  L+   +   + + A + F       + P+   ++ ++  +C
Sbjct: 547 LFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFC 606

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N  +   AR + D M   G  PNV T+T  +N   K  +  +A ++ ++M   G  P+  
Sbjct: 607 NTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQI 666

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            Y  L+   C  G +  A  +   +K +G   P+V  YT +++ + K+ + ++A +L  E
Sbjct: 667 LYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEE 726

Query: 251 AIERGVT 257
              +G++
Sbjct: 727 MRAKGLS 733



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 1/150 (0%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+       E   A   F E S  G +PN  T++  I  Y   N   +A K+ + M 
Sbjct: 598 YTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMK 657

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG-CKPNIQTYNCLLKGLCYVGRV 206
           + G +P+   +T+L+ + C +G +  A  + D+M + G C PN+  Y CL+     + + 
Sbjct: 658 ERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKR 717

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           ++A ++   ++  GL     +  +V + +C
Sbjct: 718 DQAEKLYEEMRAKGLSRLCSSEGSVSESWC 747


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 203/424 (47%), Gaps = 26/424 (6%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALV-------MLNEQETAVKFFSEASSYG---L 116
           ++ +D+FD + +     S+   N LL  +        + +    AV  F+  +  G   +
Sbjct: 81  EDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKV 140

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           AP+  TF I+I C C+          +  +   G      TFT L+ +LC   R  +A+ 
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200

Query: 177 -VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMD 233
            VL +M  +GC P++ +Y  LLKGLC   + EEA E++  +  DG    P+V +YT V+ 
Sbjct: 201 IVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIH 260

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           GF K G   +A  L  + ++ G+ PNVVT N++ +G CK     K   +L+ M   + +P
Sbjct: 261 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 320

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           +  +Y++L++G L  G+   AV I KEM R G   +    + L+  LC     +  L  +
Sbjct: 321 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLC-----KSGLHAE 375

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA----IEMGHIPRTITFN 409
           A ++F  M +     +  TYG    +L  G  T+  L+ +++     ++ G  P    FN
Sbjct: 376 AREIFNSMIQSGQKPNASTYG----SLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFN 431

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
             I A C  G++D+A L    M +   +P   +Y  +I  L ++ +  DA + +   +  
Sbjct: 432 IEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDD 491

Query: 470 GVIP 473
           G+ P
Sbjct: 492 GLSP 495



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 155/325 (47%), Gaps = 14/325 (4%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + I   + +DG   +V  ++ L+  L        A + F+     G  PN+ T+  ++
Sbjct: 340 EAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLL 399

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             Y  + +  +   V D M  NG  P    F I + + CK GRL EA    ++M + G  
Sbjct: 400 HGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFM 459

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+I  Y  ++ GLC +GR+++A      + +DGL PD+ T+  ++ GF   G+  +A EL
Sbjct: 460 PDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEEL 519

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E ++RG+ PNV TFN++ +   KEG   +   L  LM +    P+ +SY+T+++G   
Sbjct: 520 FYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFI 579

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------------MKSWEEKDLLED 353
            G++   + +  +M+  G +      N+LL G+               + S  E   +ED
Sbjct: 580 AGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIED 639

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIR 378
              +F +M  K   TD  T  I +R
Sbjct: 640 ILTLFREMLGKADKTDTITENIKLR 664



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 25/352 (7%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + +N L+   +   +   AV+   E S  G  PN  T+S++I C C      EAR++ + 
Sbjct: 323 TTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNS 382

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M  +G  PN +T+  L++     G L +   V D M + G +P    +N  +   C  GR
Sbjct: 383 MIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGR 442

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++EA      ++  G  PD+  YT V+DG CK+GR ++AM    + I+ G++P+++TFNT
Sbjct: 443 LDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNT 502

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G+   G   K   L   M  R   P+  +++++++ L K GK+  A  +F  M R G
Sbjct: 503 LIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAG 562

Query: 326 FEVDERMMNSLLRG--LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            + +    N+++ G  +  +  E   LL+D   +  K T            +   TL   
Sbjct: 563 AKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPT-----------AVTFNTL--- 608

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
                    L   + MG  P  +T   +I + C +G+I+  L L   M   A
Sbjct: 609 ---------LDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKA 651



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 178/384 (46%), Gaps = 9/384 (2%)

Query: 67  KERIDIFDSIKKDGTNW--SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           +E  ++   + +DG N   +V  +  ++       +   A   F +   +G+ PN  T +
Sbjct: 232 EEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCN 291

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +I   C      +A  V+  M D    PN TT+  L++    SG+  EA+ +L +M R 
Sbjct: 292 SVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRD 351

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G +PN+ TY+ L+  LC  G   EA E+  ++   G KP+  TY +++ G+   G   + 
Sbjct: 352 GQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDM 411

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             + +  ++ G+ P    FN     YCK G   +       M+++  +PD ++Y+T+++G
Sbjct: 412 NNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDG 471

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTK 363
           L K G++  A+S F +M+  G   D    N+L+ G  +   WE+      A ++F +M  
Sbjct: 472 LCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEK------AEELFYEMMD 525

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           +    +  T+  +I  L K  K  EA          G  P  +++N +I      G++ +
Sbjct: 526 RGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGE 585

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLI 447
            + LL  M      P+  +++ L+
Sbjct: 586 VMKLLDDMLLIGLKPTAVTFNTLL 609



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 16/244 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E    F+ +++ G    +  +  ++  L  +   + A+  F +    GL+P+  
Sbjct: 439 KCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDII 498

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +     + +A ++   M D G  PNV TF  +++ L K G++ EA ++ D M
Sbjct: 499 TFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLM 558

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G KPN+ +YN ++ G    G V E  ++L ++   GLKP   T+  ++DG       
Sbjct: 559 PRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM------ 612

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
                     +  G+ P+VVT  TL +  C++G     + L + M  +    D I+ +  
Sbjct: 613 ----------VSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIK 662

Query: 302 LNGL 305
           L G+
Sbjct: 663 LRGV 666


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 161/317 (50%), Gaps = 5/317 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FD ++K G       +  L+  L    E + A +   E    GL  ++ T++++I  YC 
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
                EA  V + M      PNV T+T L + LCK G +  A E+L +M   G + NI T
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN L+ GLC  G +E+A   ++++   GLKPDVYTYT ++   C+    + A  LL E +
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           ++G+ P +VT+N L NG+C  G    G  LL+ M ++N  P+  +Y++L+        ++
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMK 617

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
               I+K M+      +E   N L++G C    + +++ E  Y   E + K   +T   +
Sbjct: 618 STTEIYKGMLSQEVVPNENTYNILIKGHC----KARNMKEALYFHSEMIEKGFRLT-ASS 672

Query: 373 YGIVIRTLGKGKKTDEA 389
           Y  +IR L K KK  EA
Sbjct: 673 YNALIRLLNKKKKFTEA 689



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 189/409 (46%), Gaps = 12/409 (2%)

Query: 65  PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           PL E + +F  + +  T      +N LL AL      + A + F E +S    P+  T+ 
Sbjct: 237 PLDEAVQLFQELPEKNT----CSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYG 289

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           IM+  YC  ++   A K++  M   G   N   +T ++  LC  G++ +A+ V++ M   
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G   +   +  ++ G C  G +  A      ++  GL  D  TYTA+++G C+ G   EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             +L E  ++G+  + VT+  L +GYCK G   +   +   M ++   P+ ++Y+ L +G
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K G +  A  +  EM   G E++    NSL+ GLC         LE A +    M + 
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGN-----LEQAMRTMIDMDEA 524

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY  +I  L + K+ D A   L   ++ G  P  +T+N ++   C  G+++  
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             LL  M E    P+ T+Y+ L+ +    +       +Y   L Q V+P
Sbjct: 585 KRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP 633



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 186/400 (46%), Gaps = 5/400 (1%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L+  I +   +   G   +   +  ++  L    +   AV+   +   +G+  ++  F
Sbjct: 299 SELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVF 358

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + ++  +C K D   AR   D M   G   +  T+T L+N LC++G LKEA  VL +M  
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            G   +  TY  L+ G C VG++ EA+ +   +    + P+V TYTA+ DG CK G    
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A ELL+E   +G+  N+ T+N+L NG CK G   + +  +  M +    PD  +Y+T++ 
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
            L +  ++  A S+ +EM+  G +      N L+ G CM        +E   ++ E M +
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR-----VEGGKRLLEWMLE 593

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           K    +  TY  +++     K            +    +P   T+N +I+  C    + +
Sbjct: 594 KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKE 653

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           AL     M E     + +SY+ LI  L++ +K  +A  L+
Sbjct: 654 ALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLF 693



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 5/316 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  LKE   +   ++  G +     +  L+     + +   A    ++     + PN  
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +    C + D   A +++  M   G   N+ T+  L+N LCK+G L++A+  +  M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP++ TY  ++  LC    ++ A+ +L  + + G+KP + TY  +M+GFC  GR 
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
                LL   +E+ + PN  T+N+L   YC E        + K M  +  +P++ +Y+ L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G  K   ++ A+    EM+  GF +     N+L+R L      +K    +A ++FEKM
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL-----NKKKKFTEARRLFEKM 696

Query: 362 TKKVSVTDPGTYGIVI 377
            K+    +P  Y   I
Sbjct: 697 RKERLTAEPDVYNFYI 712


>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Brachypodium distachyon]
          Length = 795

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 206/443 (46%), Gaps = 45/443 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E +D+F+ + ++G       +N L+    +L       K        G+ P+  T++I
Sbjct: 289 LDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTI 348

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C   D  E  K+ + + D G   N+ T+++L+N+L K G + EA  +L ++  IG
Sbjct: 349 LIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIG 408

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYE--------------------MLMNVKNDGL---- 221
              +I  Y+ L+ G C +G +E A E                    +L+ +   GL    
Sbjct: 409 LDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEA 468

Query: 222 -----------KP-DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
                      +P DV  Y  V+DG+ K+G  + A+ L ++ +  G+ P +VT N++  G
Sbjct: 469 RWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYG 528

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YCK G         + ++  + LP  ++Y+TL++ L + GK+   +SI  EMV  G + +
Sbjct: 529 YCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPN 588

Query: 330 ERMMNSLLRGLCMKSWEEKDL-LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
               + +++GLC      K+L   DA    + M  +    DP TY  +I+   + +    
Sbjct: 589 AITYSVVIKGLC------KELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQM 642

Query: 389 ALIHLH-HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           A  H+H   +  G +P  +T+N +I  LC +G++ +A  LL  + E      + +Y  LI
Sbjct: 643 AF-HIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLESLRERGIELRKFAYTTLI 701

Query: 448 TKLDQLEKSYDACALYGAALKQG 470
                    Y+A +L+G  L  G
Sbjct: 702 KAECAKGMPYEAISLFGKLLDDG 724



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 190/406 (46%), Gaps = 7/406 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNSWTFSIMIR 128
           +++F+ ++  G + S    + ++  L   ++   A+ F  EA       P   +F++++ 
Sbjct: 187 LELFEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMS 246

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
             CN      A+  +  M   G +P+  T++ L++ LCK G L EA+++ +++   G K 
Sbjct: 247 ALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKL 306

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
              TYN L+ G   +G   E  +++  ++  G++PD+ TYT ++ G C+ G   E M++ 
Sbjct: 307 ETVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIR 366

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           N+ +++G+  N+VT++ L N   K+G   +   LL  +       D I+YS L++G  K 
Sbjct: 367 NDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKL 426

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMN-SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
           G+I  A+ +   M      V   + + S+L GLC     +K LL +A    E +  K   
Sbjct: 427 GEIERALEVCDVMCCSQKVVPTSLNHLSILVGLC-----KKGLLVEARWYLENVAVKYQP 481

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D   Y +VI    K      A+      +  G  P  +T N+++   C  G +  A   
Sbjct: 482 GDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESY 541

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              +   + +P+  +Y  L+  L +  K     ++    +++G+ P
Sbjct: 542 FRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKP 587



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 184/397 (46%), Gaps = 6/397 (1%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G N     ++ L+  L  +   + AV  F   +  G+   + T++ +I  Y       
Sbjct: 266 KYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTR 325

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           E  K+I  M   G  P++ T+TIL+   C+SG ++E +++ + +   G + NI TY+ LL
Sbjct: 326 EVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLL 385

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN-EAIERGV 256
             L   G V EA  +L  + + GL  D+  Y+ ++ G+CK+G    A+E+ +     + V
Sbjct: 386 NALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKV 445

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            P  +   ++  G CK+G  ++    L+ +  +    D + Y+ +++G  K G I  AV 
Sbjct: 446 VPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVG 505

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           ++ ++V  G        NS+L G C K  +    L+ A   F  +     +    TY  +
Sbjct: 506 LYDQIVIAGMFPTIVTCNSILYGYC-KCGD----LQAAESYFRAIQISSLLPTMVTYTTL 560

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +  L +  K +  L  L+  +E G  P  IT++ VI+ LC E +   A+  L  M+    
Sbjct: 561 MDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGV 620

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                +Y+ LI    +++    A  ++   +  G++P
Sbjct: 621 NADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVP 657



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 141/298 (47%), Gaps = 5/298 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++     + +   AV  + +    G+ P   T + ++  YC   D   A      + 
Sbjct: 487 YNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQ 546

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +   P + T+T L+++L ++G++   L +L +M   G KPN  TY+ ++KGLC   R  
Sbjct: 547 ISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFH 606

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A   L N+  +G+  D  TY  ++ GFC+V     A  + +  +  G+ P  VT+N L 
Sbjct: 607 DAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLI 666

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           N  C +G  ++   LL+ +++R     K +Y+TL+      G    A+S+F +++  GFE
Sbjct: 667 NVLCLKGQVIQAEYLLESLRERGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDDGFE 726

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              +  ++ +  LC + +      ++A      M       D   Y +++R L K K+
Sbjct: 727 TTVKDFSAAINRLCKRKFA-----KEAVMFIPFMLSAGVFPDTQVYYVLVRALQKRKE 779



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/446 (22%), Positives = 179/446 (40%), Gaps = 41/446 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           ++  ++E + I + I   G   ++  ++ LL AL        A     E  S GL  +  
Sbjct: 355 ESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDII 414

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCM--------------------------------FDN 149
            +SI+I  YC   +   A +V D M                                 +N
Sbjct: 415 AYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEARWYLEN 474

Query: 150 ---GYHP-NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
               Y P +V  + ++++   K G +  A+ + DQ+   G  P I T N +L G C  G 
Sbjct: 475 VAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGD 534

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++ A      ++   L P + TYT +MD   + G+ N  + +L E +E+G+ PN +T++ 
Sbjct: 535 LQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSV 594

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +  G CKE      +  L  M       D ++Y+TL+ G  +   I+ A  I   MV  G
Sbjct: 595 VIKGLCKELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCG 654

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   N L+  LC+K      +++  Y + E + ++        Y  +I+       
Sbjct: 655 IVPTPVTYNFLINVLCLKG----QVIQAEY-LLESLRERGIELRKFAYTTLIKAECAKGM 709

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             EA+      ++ G       F+  I  LC      +A++ +  M      P    Y +
Sbjct: 710 PYEAISLFGKLLDDGFETTVKDFSAAINRLCKRKFAKEAVMFIPFMLSAGVFPDTQVYYV 769

Query: 446 LITKLDQLEKSYDACALYGAALKQGV 471
           L+  L + ++ +    L+  A+K G+
Sbjct: 770 LVRALQKRKELFYLPLLHALAVKTGI 795



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 159/336 (47%), Gaps = 19/336 (5%)

Query: 146 MFDNGYH---PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           +  NG+    P+   +  L NS  ++  + +AL VL +M  +  + ++ TY+ LL GL  
Sbjct: 123 ILRNGFRECDPSSIMWDALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLLYGL-- 180

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG--VTPNV 260
               + A E+   ++  G+    Y+++ ++DG CK  +  EA+  L EA  +G    P  
Sbjct: 181 -RMTDMALELFEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEA-RKGERFKPLG 238

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           ++FN L +  C  G        L LM K    PD+ +YSTL++GL K G +  AV +F+ 
Sbjct: 239 MSFNVLMSALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFER 298

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           +   G +++    NSL+ G     +    L  +  ++ + M  +    D  TY I+I   
Sbjct: 299 VTEEGMKLETVTYNSLING-----YRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGH 353

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            +    +E +   +  ++ G     +T++ ++ AL  +G + +A  LL  ++        
Sbjct: 354 CESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDI 413

Query: 441 TSYDMLI---TKLDQLEKSYDACALYGAALKQGVIP 473
            +Y +LI    KL ++E++ + C +      Q V+P
Sbjct: 414 IAYSILIHGYCKLGEIERALEVCDV--MCCSQKVVP 447


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 161/317 (50%), Gaps = 5/317 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FD ++K G       +  L+  L    E + A +   E    GL  ++ T++++I  YC 
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
                EA  V + M      PNV T+T L + LCK G +  A E+L +M   G + NI T
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN L+ GLC  G +E+A   ++++   GLKPDVYTYT ++   C+    + A  LL E +
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           ++G+ P +VT+N L NG+C  G    G  LL+ M ++N  P+  +Y++L+        ++
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMK 617

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
               I+K M+      +E   N L++G C    + +++ E  Y   E + K   +T   +
Sbjct: 618 STTEIYKGMLSQEVVPNENTYNILIKGHC----KARNMKEALYFHSEMIEKGFRLT-ASS 672

Query: 373 YGIVIRTLGKGKKTDEA 389
           Y  +IR L K KK  EA
Sbjct: 673 YNALIRLLNKKKKFTEA 689



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 190/409 (46%), Gaps = 12/409 (2%)

Query: 65  PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           PL E + +F  + +  T      +N LL AL      + A + F E +S    P+  T+ 
Sbjct: 237 PLDEAVQLFQELPEKNT----CSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYG 289

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           IM+  YC  ++   A K++  M   G   N   +T ++  LC  G++ +A+ V++ M   
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G   +   +  ++ G C  G +  A      ++  GL  D  TYTA+++G C+ G   EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             +L E  ++G+  + VT+  L +GYCK G   +   +   M ++   P+ ++Y+ L +G
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K G +  A  +  EM   G E++    NSL+ GLC     +   LE A +    M + 
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC-----KAGNLEQAMRTMIDMDEA 524

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY  +I  L + K+ D A   L   ++ G  P  +T+N ++   C  G+++  
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             LL  M E    P+ T+Y+ L+ +    +       +Y   L Q V+P
Sbjct: 585 KRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP 633



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 186/400 (46%), Gaps = 5/400 (1%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L+  I +   +   G   +   +  ++  L    +   AV+   +   +G+  ++  F
Sbjct: 299 SELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVF 358

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + ++  +C K D   AR   D M   G   +  T+T L+N LC++G LKEA  VL +M  
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            G   +  TY  L+ G C VG++ EA+ +   +    + P+V TYTA+ DG CK G    
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A ELL+E   +G+  N+ T+N+L NG CK G   + +  +  M +    PD  +Y+T++ 
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
            L +  ++  A S+ +EM+  G +      N L+ G CM        +E   ++ E M +
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR-----VEGGKRLLEWMLE 593

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           K    +  TY  +++     K            +    +P   T+N +I+  C    + +
Sbjct: 594 KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKE 653

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           AL     M E     + +SY+ LI  L++ +K  +A  L+
Sbjct: 654 ALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLF 693



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 149/316 (47%), Gaps = 5/316 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  LKE   +   ++  G +     +  L+     + +   A    ++     + PN  
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +    C + D   A +++  M   G   N+ T+  L+N LCK+G L++A+  +  M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP++ TY  ++  LC    ++ A+ +L  + + G+KP + TY  +M+GFC  GR 
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
                LL   +E+ + PN  T+N+L   YC E        + K M  +  +P++ +Y+ L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G  K   ++ A+    EM+  GF +     N+L+R L      +K    +A ++FEKM
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL-----NKKKKFTEARRLFEKM 696

Query: 362 TKKVSVTDPGTYGIVI 377
            K     +P  Y   I
Sbjct: 697 RKDRLTAEPDVYNFYI 712


>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
 gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
          Length = 501

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 194/375 (51%), Gaps = 16/375 (4%)

Query: 65  PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           PL + I +F  ++      +   +  +L  LV  N+ ++A +F+ +    G+ P   + +
Sbjct: 130 PL-DSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLN 188

Query: 125 IMIRCYC-NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           ++I+ +C N     +A  +   M ++G  P+  T+  L+N LC+   + EA E+L +M  
Sbjct: 189 VLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMET 248

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            GC P++ TY  ++ GLC +  V+EA  +L ++K+  ++P+V+TY+++MDGFCK G S+ 
Sbjct: 249 KGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSR 308

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A ++L   I++ + PN+++++TL NG C EG   + + +   MK +   PD   Y  ++N
Sbjct: 309 ARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVN 368

Query: 304 GLLKWGKIRPAVSIFKEMV-------RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
            L    + + A +   EMV       R  + +  R  N ++ GLC  +   +     A+Q
Sbjct: 369 CLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNR-----AFQ 423

Query: 357 VF-EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++   +T+ +S+T   T+  +++     K   +    L   +  G IP+   ++ ++   
Sbjct: 424 LYLSVLTRGISIT-VDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCF 482

Query: 416 CGEGKIDKALLLLFL 430
           C E K   A+ LL L
Sbjct: 483 CDERKACDAMKLLQL 497



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 207/443 (46%), Gaps = 8/443 (1%)

Query: 29  LVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDF 88
           L++F +A+   A       N  SL   +    I A+  +    + D +K++  + +    
Sbjct: 61  LIIFDSATAEYANGFKHDLNTFSLMISKL---ISANQFRLAETLLDRMKEEKIDVTEDIL 117

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
             +  A   +++   +++ F +   +   P   ++  ++     +N    A +    M  
Sbjct: 118 LSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRK 177

Query: 149 NGYHPNVTTFTILVNSLCK-SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            G  P VT+  +L+ + CK SG + +A+ +   M   GC+P+  TY  L+ GLC    + 
Sbjct: 178 MGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIV 237

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA E+L  ++  G  P V TYT+++ G C++   +EAM LL +  ++ + PNV T+++L 
Sbjct: 238 EAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLM 297

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G+CK G   +   +L+LM ++   P+ ISYSTLLNGL   GKI  A+ IF  M   GF+
Sbjct: 298 DGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFK 357

Query: 328 VDERMMNSLLRGLCMKS--WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            D  +   ++  LC  S   E  + L++      K  +        T+  VI  L     
Sbjct: 358 PDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINN 417

Query: 386 TDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           ++ A   L+ ++    I  T+ TFN++++  C +  + K   +L  M  +  IP    + 
Sbjct: 418 SNRAF-QLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWS 476

Query: 445 MLITKLDQLEKSYDACALYGAAL 467
            ++       K+ DA  L    L
Sbjct: 477 TMVNCFCDERKACDAMKLLQLQL 499



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 148/334 (44%), Gaps = 14/334 (4%)

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV-GR 205
           + NG+  ++ TF+++++ L  + + + A  +LD+M     +  I     +L  +C   GR
Sbjct: 71  YANGFKHDLNTFSLMISKLISANQFRLAETLLDRMK----EEKIDVTEDILLSICRAYGR 126

Query: 206 VE---EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           +    ++  +   +++   KP   +Y +V+    +  +   A     +  + G+ P V +
Sbjct: 127 IHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTS 186

Query: 263 FNTLFNGYCK-EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            N L   +CK  GT  K + L + M    C PD  +Y TL+NGL ++  I  A  + +EM
Sbjct: 187 LNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEM 246

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G         S++ GLC     + + +++A ++ E M  K    +  TY  ++    
Sbjct: 247 ETKGCSPSVVTYTSIIHGLC-----QLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFC 301

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K   +  A   L   I+    P  I+++ ++  LC EGKI++AL +   M      P   
Sbjct: 302 KTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAG 361

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            Y  ++  L  + +  +A       +  G+ P R
Sbjct: 362 LYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNR 395


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 184/355 (51%), Gaps = 6/355 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    ++ I +F  +KK     ++  +N ++  L      + A    +E    G+  + +
Sbjct: 187 KIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVY 246

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +++ MI  +C+   F  A K++D M   G  +P+V TF IL++ LCK GR+ EA  V+  
Sbjct: 247 SYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAV 306

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + G KP+I +YN L+ G C  G V EA ++   +      P+V +Y  +++G+CKV  
Sbjct: 307 MIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRM 366

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EAM LL E   + + P+ VT+N L +G  K G  +    L++ M+      D I+Y+ 
Sbjct: 367 VDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNV 426

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LL+   K  K   A+++F+ ++  G   + R  N LL GLC     +   L+ A ++F+ 
Sbjct: 427 LLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLC-----KSGRLKYAKEIFQL 481

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++ K    +  TY I+I  L K    DEA   L+  +   ++P  ITF+ +++A+
Sbjct: 482 LSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 218/484 (45%), Gaps = 48/484 (9%)

Query: 4   LVPSNSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKA 63
           L P  +F F  T+ +  +K+P FN           T  S     +       +  +++ +
Sbjct: 29  LYPFTTF-FARTHHKKLHKLPTFN----------DTVSSFHHILHHHPPPPIQHFNKLLS 77

Query: 64  SPLKER-----IDIFDSIKKDGT-NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA 117
           + +K +     + ++  ++   T   S+  F+ L+ A   L +   A          G  
Sbjct: 78  TLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQ 137

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
            +    + +++  C K    EA  ++    D G+  +   +  ++N LCK G+ ++A+++
Sbjct: 138 IDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQM 197

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
             +M +I   PN+  YN ++ GLC  G V+EA  +   +  +G++ DVY+Y +++ GFC 
Sbjct: 198 FPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCS 257

Query: 238 VGRSNEAMELLNEAIERG-VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           VGR   A++LL+E + RG V P+V TFN L +G CK G   +   ++ +M KR   PD +
Sbjct: 258 VGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIV 317

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-----------MKSW 345
           SY+ L+NG    G +  A  +F +MV      +     +L+ G C           +   
Sbjct: 318 SYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEM 377

Query: 346 EEKDLLEDA-------------------YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             K+L+ D                    + + E M       D  TY +++    K +K 
Sbjct: 378 HNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKF 437

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D+AL    H IE+G  P   T+N ++  LC  G++  A  +  L+      P+  +Y+++
Sbjct: 438 DKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIM 497

Query: 447 ITKL 450
           I  L
Sbjct: 498 IHGL 501



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 183/361 (50%), Gaps = 6/361 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  ++  L  + +   A++ F +     + PN   ++ +I   C +    EA  +   M 
Sbjct: 178 YGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMV 237

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG-CKPNIQTYNCLLKGLCYVGRV 206
           +NG   +V ++  +++  C  GR + A+++LD+M   G   P++ T+N L+ GLC +GRV
Sbjct: 238 ENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRV 297

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            EAY ++  +   G KPD+ +Y A+M+G+C  G   EA ++ ++ +ER   PNV+++ TL
Sbjct: 298 SEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTL 357

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            NGYCK     + + LL  M  +N +PD ++Y+ LL+GL K G+      + + M   G 
Sbjct: 358 INGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQ 417

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
             D    N LL       + + +  + A  +F+ + +     +  TY I++  L K  + 
Sbjct: 418 PADLITYNVLL-----DDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRL 472

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
             A          G  P   T+N +I  LC EG +D+A  LL+ M  +  +P+  ++D +
Sbjct: 473 KYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTI 532

Query: 447 I 447
           +
Sbjct: 533 V 533



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 163/328 (49%), Gaps = 11/328 (3%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++ TF+IL+N+  + G++  A  +L  + ++G + +++    L+KGLC  GRV EA  +
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSL 162

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L    + G + D   Y  +++G CK+G++ +A+++  +  +  V PN++ +NT+ +G CK
Sbjct: 163 LHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCK 222

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG-FEVDER 331
           +G   +  GL   M +     D  SY+++++G    G+ + AV +  EMV  G    D  
Sbjct: 223 QGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             N L+ GLC     +   + +AY V   M K+    D  +Y  ++          EA  
Sbjct: 283 TFNILIDGLC-----KLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQ 337

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
                +E   +P  I++  +I   C    +D+A++LL  M+    +P   +Y+ L   LD
Sbjct: 338 VFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCL---LD 394

Query: 452 QLEKSYDACALYGAALKQGVIPQRKPQD 479
            L KS    +LY   L + +    +P D
Sbjct: 395 GLSKS--GRSLYEWDLVEAMRASGQPAD 420



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 131/259 (50%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  FN L+  L  L     A    +     G  P+  +++ ++  YC      EA++V D
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M +    PNV ++  L+N  CK   + EA+ +L +M      P+  TYNCLL GL   G
Sbjct: 341 KMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R    ++++  ++  G   D+ TY  ++D + K  + ++A+ L    IE G++PN+ T+N
Sbjct: 401 RSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYN 460

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +G CK G       + +L+  + C P+  +Y+ +++GL K G +  A ++  +MV  
Sbjct: 461 ILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNN 520

Query: 325 GFEVDERMMNSLLRGLCMK 343
            +  +    ++++R + +K
Sbjct: 521 NYLPNYITFDTIVRAILVK 539



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 140/288 (48%), Gaps = 6/288 (2%)

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           KP++ T++ L+     +G++  A+ +L N+   G + DV   T +M G C  GR  EA+ 
Sbjct: 102 KPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVS 161

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           LL+E ++RG   + V + T+ NG CK G     + +   MKK    P+ I Y+T+++GL 
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLC 221

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G +  A  +  EMV  G E+D    NS++ G C          + A ++ ++M  +  
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFC-----SVGRFQAAVKLLDEMVVRGK 276

Query: 367 V-TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           V  D  T+ I+I  L K  +  EA   +   I+ G  P  +++N ++   C  G + +A 
Sbjct: 277 VYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAK 336

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   M E   +P+  SY  LI    ++    +A  L      + ++P
Sbjct: 337 QVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVP 384



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 50/107 (46%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           D  K     + + +F  I + G + ++  +N LL  L      + A + F   S+ G  P
Sbjct: 430 DYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQP 489

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           N  T++IMI   C +    EA  ++  M +N Y PN  TF  +V ++
Sbjct: 490 NIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 161/317 (50%), Gaps = 5/317 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FD ++K G       +  L+  L    E + A +   E    GL  ++ T++++I  YC 
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
                EA  V + M      PNV T+T L + LCK G +  A E+L +M   G + NI T
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN L+ GLC  G +E+A   ++++   GLKPDVYTYT ++   C+    + A  LL E +
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           ++G+ P +VT+N L NG+C  G    G  LL+ M ++N  P+  +Y++L+        ++
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMK 617

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
               I+K M+      +E   N L++G C    + +++ E  Y   E + K   +T   +
Sbjct: 618 STTEIYKGMLSQEVVPNENTYNILIKGHC----KARNMKEALYFHSEMIEKGFRLT-ASS 672

Query: 373 YGIVIRTLGKGKKTDEA 389
           Y  +IR L K KK  EA
Sbjct: 673 YNALIRLLNKKKKFTEA 689



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 190/409 (46%), Gaps = 12/409 (2%)

Query: 65  PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           PL E + +F  + +  T      +N LL AL      + A + F E +S    P+  T+ 
Sbjct: 237 PLDEAVQLFQELPEKNT----CSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYG 289

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           IM+  YC  ++   A K++  M   G   N   +T ++  LC  G++ +A+ V++ M   
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G   +   +  ++ G C  G +  A      ++  GL  D  TYTA+++G C+ G   EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             +L E  ++G+  + VT+  L +GYCK G   +   +   M ++   P+ ++Y+ L +G
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K G +  A  +  EM   G E++    NSL+ GLC     +   LE A +    M + 
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC-----KAGNLEQAMRTMIDMDEA 524

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY  +I  L + K+ D A   L   ++ G  P  +T+N ++   C  G+++  
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             LL  M E    P+ T+Y+ L+ +    +       +Y   L Q V+P
Sbjct: 585 KRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP 633



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 186/400 (46%), Gaps = 5/400 (1%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L+  I +   +   G   +   +  ++  L    +   AV+   +   +G+  ++  F
Sbjct: 299 SELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVF 358

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + ++  +C K D   AR   D M   G   +  T+T L+N LC++G LKEA  VL +M  
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            G   +  TY  L+ G C VG++ EA+ +   +    + P+V TYTA+ DG CK G    
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A ELL+E   +G+  N+ T+N+L NG CK G   + +  +  M +    PD  +Y+T++ 
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
            L +  ++  A S+ +EM+  G +      N L+ G CM        +E   ++ E M +
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR-----VEGGKRLLEWMLE 593

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           K    +  TY  +++     K            +    +P   T+N +I+  C    + +
Sbjct: 594 KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKE 653

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           AL     M E     + +SY+ LI  L++ +K  +A  L+
Sbjct: 654 ALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLF 693



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 5/316 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  LKE   +   ++  G +     +  L+     + +   A    ++     + PN  
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +    C + D   A +++  M   G   N+ T+  L+N LCK+G L++A+  +  M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KP++ TY  ++  LC    ++ A+ +L  + + G+KP + TY  +M+GFC  GR 
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
                LL   +E+ + PN  T+N+L   YC E        + K M  +  +P++ +Y+ L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G  K   ++ A+    EM+  GF +     N+L+R L      +K    +A ++FEKM
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL-----NKKKKFTEARRLFEKM 696

Query: 362 TKKVSVTDPGTYGIVI 377
            K+    +P  Y   I
Sbjct: 697 RKERLTAEPDVYNFYI 712


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 202/411 (49%), Gaps = 44/411 (10%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G  ++V + N LL  L    E   AV    E     L P+ ++++ +IR +C   +  
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK---------- 187
           +A ++ + M  +G   ++ T+ IL+++ CK+G++ EA+  L +M  +G +          
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254

Query: 188 -------------------------PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
                                    P   TYN L++G C +G+++EA E+   +   G++
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P+VYTYT ++DG C VG++ EA++ LN  IE+   PN VT+N + N  CK+G     V +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM--NSLLRGL 340
           ++LMKKR   PD I+Y+ LL GL   G +  A  +   M++     D  ++  N+L+ GL
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     +++ L  A  +++ + +K+   D  T  I++ +  K    ++A+  L   I   
Sbjct: 435 C-----KENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM-ELWKQISDS 488

Query: 401 HIPR-TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            I R + T+  +I   C  G ++ A  LL  M      PS   Y+ L++ L
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 187/400 (46%), Gaps = 8/400 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK  + +F      G++ + +  N L+  LV     E A  F+ +        N  + S 
Sbjct: 54  LKNAVSVFQQAVDSGSSLAFAGSN-LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSG 112

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++ CY        A  V+  M   G+  NV    IL+  LC++    +A+ +L +M R  
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++ +YN +++G C    +E+A E+   +K  G    + T+  ++D FCK G+ +EAM
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
             L E    G+  ++V + +L  G+C  G   +G  L   + +R   P  I+Y+TL+ G 
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+++ A  IF+ M+  G   +      L+ GLC          ++A Q    M +K 
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT-----KEALQPLNLMIEKD 347

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY I+I  L K     +A+  +    +    P  IT+N ++  LC +G +D+A 
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407

Query: 426 LLLFLMYEHAKI--PSRTSYDMLITKLDQLEKSYDACALY 463
            LL+LM + +    P   SY+ LI  L +  + + A  +Y
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 188/416 (45%), Gaps = 11/416 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E +     +K  G    +  +  L+       E +     F E    G +P + 
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +IR +C      EA ++ + M + G  PNV T+T L++ LC  G+ KEAL+ L+ M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLM 343

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                +PN  TYN ++  LC  G V +A E++  +K    +PD  TY  ++ G C  G  
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 242 NEAMELLNEAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           +EA +LL   ++      P+V+++N L +G CKE    + + +  L+ ++    D+++ +
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            LLN  LK G +  A+ ++K++       +     +++ G C     +  +L  A  +  
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC-----KTGMLNVAKGLLC 518

Query: 360 KMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           KM  +VS   P    Y  ++ +L K    D+A           + P  ++FN +I     
Sbjct: 519 KM--RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            G I  A  LL  M      P   +Y  LI +  +L    +A + +   +  G  P
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 170/389 (43%), Gaps = 42/389 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + + G +     +N L+     L + + A + F      G+ PN +T++ +I   C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA + ++ M +    PN  T+ I++N LCK G + +A+E+++ M +   +P+  
Sbjct: 329 GVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDGFCK------------ 237
           TYN LL GLC  G ++EA ++L  +  D     PDV +Y A++ G CK            
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448

Query: 238 -----------------------VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
                                   G  N+AMEL  +  +  +  N  T+  + +G+CK G
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
                 GLL  M+     P    Y+ LL+ L K G +  A  +F+EM R     D    N
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            ++ G    S +  D+ + A  +   M++     D  TY  +I    K    DEA+    
Sbjct: 569 IMIDG----SLKAGDI-KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDK 423
             ++ G  P     ++V++    +G+ DK
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDK 652



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 6/318 (1%)

Query: 47  ENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM---LNEQE 102
           E P ++     ++++ K   + + ++I + +KK  T      +N LL  L     L+E  
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
             +    + SSY   P+  +++ +I   C +N   +A  + D + +     +  T  IL+
Sbjct: 408 KLLYLMLKDSSY-TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
           NS  K+G + +A+E+  Q+       N  TY  ++ G C  G +  A  +L  ++   L+
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P V+ Y  ++   CK G  ++A  L  E       P+VV+FN + +G  K G       L
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L  M +    PD  +YS L+N  LK G +  A+S F +MV  GFE D  + +S+L+  C+
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK-YCI 645

Query: 343 KSWEEKDLLEDAYQVFEK 360
              E   L E   ++ +K
Sbjct: 646 SQGETDKLTELVKKLVDK 663



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 126/243 (51%), Gaps = 2/243 (0%)

Query: 62  KASPLKERIDIFDS-IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K + L + +DI+D  ++K G    V+  N LL + +   +   A++ + + S   +  NS
Sbjct: 436 KENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ MI  +C       A+ ++  M  +   P+V  +  L++SLCK G L +A  + ++
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R    P++ ++N ++ G    G ++ A  +L+ +   GL PD++TY+ +++ F K+G 
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+   ++ ++ G  P+    +++      +G   K   L+K +  ++ + DK    T
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCT 674

Query: 301 LLN 303
           +++
Sbjct: 675 VMD 677



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 6/235 (2%)

Query: 240 RSNE-AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           R++E A     + +E     N V+ + L   Y +        G+L LM KR    +  ++
Sbjct: 86  RNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNH 145

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + LL GL +  +   AVS+ +EM R     D    N+++RG C     E   LE A ++ 
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC-----EGKELEKALELA 200

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            +M          T+GI+I    K  K DEA+  L     MG     + + ++I+  C  
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G++D+   L   + E    P   +Y+ LI    +L +  +A  ++   +++GV P
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 79/162 (48%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           L P+ + ++ ++   C +    +A ++ + M  +   P+V +F I+++   K+G +K A 
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            +L  M R G  P++ TY+ L+     +G ++EA      + + G +PD +   +V+   
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
              G +++  EL+ + +++ +  +     T+ +  C     M
Sbjct: 645 ISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANM 686


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 187/397 (47%), Gaps = 6/397 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A    E   + +  K  G+  SV  +N +L  L      E A++ F E     + PN  T
Sbjct: 348 AGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPT 406

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I   C +     A ++ D M   G  PNV T  I+++ LCK+ +L+EA  + + M 
Sbjct: 407 YNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMD 466

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              C PN  T++ L+ GL   GRV++AY +   + + G  P    YT+++  F K GR  
Sbjct: 467 DKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKE 526

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +  ++  E +  G +P++   NT  +   K G   KG  L + +     +PD  SYS L+
Sbjct: 527 DGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILI 586

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +GL+K G       +F  M   G  +D    N+++ G C      K     AYQ+ E+M 
Sbjct: 587 HGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNK-----AYQLLEEMK 641

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            K       TYG VI  L K  + DEA +    A   G     + ++++I      G+ID
Sbjct: 642 VKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRID 701

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           +A L++  + +    P+  +++ L+  L + E+  +A
Sbjct: 702 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 738



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 163/318 (51%), Gaps = 5/318 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I+  +   G +  ++  N  +  +    E E     F E +++G  P++ ++SI+I    
Sbjct: 531 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 590

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 E  ++   M + G   +   +  +++  CKSG++ +A ++L++M   G  P + 
Sbjct: 591 KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVV 650

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  ++ GL  + R++EAY +    K++G+K +V  Y++++DGF KVGR +EA  ++ E 
Sbjct: 651 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL 710

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+TPNV T+N L +   K     + +   + MK   C P++I+YS L+NGL +  K 
Sbjct: 711 MQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKF 770

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A   ++EM + G + +     +++ GL     +  ++LE A  +F +      + D  
Sbjct: 771 NKAFVFWQEMQKLGLKPNTITYTTMISGLA----KAGNILE-ASGLFSRFKANGGIPDSA 825

Query: 372 TYGIVIRTLGKGKKTDEA 389
           +Y  +I  L    K  +A
Sbjct: 826 SYNAMIEGLSSANKAMDA 843



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 191/410 (46%), Gaps = 9/410 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   ++I D +++ G   +V   N ++  L    + E A   F         PN+ TFS 
Sbjct: 420 LNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSS 479

Query: 126 MIRCY--CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           +I     C + D  +A  + + M D G+ P    +T L+ S  K GR ++  ++  +M  
Sbjct: 480 LIDGLGKCGRVD--DAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVH 537

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            GC P++   N  +  +   G  E+   +   +   G  PD  +Y+ ++ G  K G +NE
Sbjct: 538 TGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANE 597

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
             EL     E+G   +   +N + +G+CK G   K   LL+ MK +   P  ++Y ++++
Sbjct: 598 TYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVID 657

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL K  ++  A  +F+E    G +++  + +SL+ G     + +   +++AY + E++ +
Sbjct: 658 GLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG-----FGKVGRIDEAYLIMEELMQ 712

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           K    +  T+  ++  L K ++ +EALI      ++   P  IT++ +I  LC   K +K
Sbjct: 713 KGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNK 772

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A +    M +    P+  +Y  +I+ L +     +A  L+      G IP
Sbjct: 773 AFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIP 822



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/447 (22%), Positives = 198/447 (44%), Gaps = 41/447 (9%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K+  L+E  DI  +++K     + S +  L+ AL  + E +  +  F +    G   N 
Sbjct: 171 VKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNV 230

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             F+ +IR +  +     A  ++D M  N    ++  + + ++   K+G++  + +   +
Sbjct: 231 HLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHE 290

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P+  TY  ++  LC   R++EA E+   ++ +   P  Y Y  ++ G+   G+
Sbjct: 291 MKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGK 350

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA  LL     +G  P+V+ +N +     K+    + + + + M KR+ +P+  +Y+ 
Sbjct: 351 FDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNI 409

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++ L + GK+  A+ I  +M R G   +   +N ++  LC     +   LE+A  +FE 
Sbjct: 410 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLC-----KAQKLEEACSIFEG 464

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL--CGE 418
           M  KV   +  T+  +I  LGK  + D+A       ++ GH+P  I + ++I++   CG 
Sbjct: 465 MDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGR 524

Query: 419 ---------------------------------GKIDKALLLLFLMYEHAKIPSRTSYDM 445
                                            G+ +K   L   +  H  IP   SY +
Sbjct: 525 KEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSI 584

Query: 446 LITKLDQLEKSYDACALYGAALKQGVI 472
           LI  L +   + +   L+ A  +QG +
Sbjct: 585 LIHGLVKAGLANETYELFYAMKEQGCV 611



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 118/511 (23%), Positives = 215/511 (42%), Gaps = 55/511 (10%)

Query: 11  IFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKEN-------PRSLQAQRFVDRI-K 62
           IF    R     +P +N L+           +L+++++       P  L     +DR+ K
Sbjct: 392 IFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCK 451

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L+E   IF+ +       +   F+ L+  L      + A   + +    G  P +  
Sbjct: 452 AQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV 511

Query: 123 FSIMIRCY--CNKN-----------------DFFEARKVIDCMFD--------------- 148
           ++ +IR +  C +                  D       +DC+F                
Sbjct: 512 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 571

Query: 149 -NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G+ P+  +++IL++ L K+G   E  E+   M   GC  +   YN ++ G C  G+V 
Sbjct: 572 AHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 631

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +AY++L  +K  G  P V TY +V+DG  K+ R +EA  L  EA   G+  NVV +++L 
Sbjct: 632 KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 691

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G+ K G   +   +++ + ++   P+  +++ LL+ L+K  +I  A+  F+ M      
Sbjct: 692 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCP 751

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            ++   + L+ GLC      K     A+  +++M K     +  TY  +I  L K     
Sbjct: 752 PNQITYSILINGLCRVRKFNK-----AFVFWQEMQKLGLKPNTITYTTMISGLAKAGNIL 806

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS-RTSYDML 446
           EA          G IP + ++N +I+ L    K   A    + ++E  ++          
Sbjct: 807 EASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDA----YALFEETRLKGCNIHTKTC 862

Query: 447 ITKLDQLEKS--YDACALYGAALKQGVIPQR 475
           +  LD L K+   +  A+ GA LK+    Q 
Sbjct: 863 VVLLDALHKAECLEQAAIVGAVLKETAKSQH 893



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 149/328 (45%), Gaps = 6/328 (1%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M + GY  NV  FT L+    + GR+  AL +LD+M       +I  YN  +      G+
Sbjct: 221 MQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGK 280

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           V+ +++    +K+ GL PD  TYT+++   CK  R +EA+EL  +  +    P    +NT
Sbjct: 281 VDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNT 340

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +  GY   G   +  GLL+  K +  +P  I+Y+ +L  L K  ++  A+ IF+EM R  
Sbjct: 341 MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA 400

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              +    N L+  LC +       L  A ++ + M +     +  T  I+I  L K +K
Sbjct: 401 VP-NVPTYNILIDMLCREGK-----LNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQK 454

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            +EA        +    P  +TF+++I  L   G++D A  L   M +   +P    Y  
Sbjct: 455 LEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTS 514

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           LI    +  +  D   +Y   +  G  P
Sbjct: 515 LIRSFFKCGRKEDGHKIYKEMVHTGCSP 542



 Score = 42.0 bits (97), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 5/132 (3%)

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y++LL  + +  +      I +EM   GF     +   L+   C+KS +    L +A+ 
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVAN-CVKSRK----LREAFD 181

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           + + M K         Y I+I  L + ++ D  LI  H   E+G+      F  +I+   
Sbjct: 182 IIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFA 241

Query: 417 GEGKIDKALLLL 428
            EG++D AL LL
Sbjct: 242 REGRVDAALSLL 253


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 191/412 (46%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L +   +FD +  +G    +  ++ L+  L      E   +    A   G+  +  
Sbjct: 319 KEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVV 378

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            FS  +  Y    D     ++   M + G  PNV + +IL+   C++GR+ EA  +  Q+
Sbjct: 379 GFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQI 438

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            ++G +P+I TY+ L+ G C  G + + + +  ++     +PD   Y+ +++G CK G  
Sbjct: 439 LKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLV 498

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+    +A+ RG++PNV T NTL + +C+    +  + +  LM   N   D ++Y+ L
Sbjct: 499 GDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTIL 558

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G  ++G++  A+ +F +M++  F+ D     +L+ GLC        L      +F+ M
Sbjct: 559 IKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLC-----IFDFM 613

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K     D   Y ++I    +    + AL    H +E G  P   TFN +I   C   ++
Sbjct: 614 CKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRL 673

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           D A+ L   M      P+  ++ +LI    +  +  DA  ++   L++G  P
Sbjct: 674 DDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEP 725



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 185/375 (49%), Gaps = 7/375 (1%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           E E  ++F       G   +  T + +++    +ND   A    + +   G  PNV TF+
Sbjct: 252 EVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFS 311

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L+++ CK G L +A  + D M   G  P++  Y+ L+ GL   GR+E+   +L+   + 
Sbjct: 312 TLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDK 371

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G+K DV  +++ MD + K+G     +++    +  G++PNVV+ + L  G+C+ G  ++ 
Sbjct: 372 GIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEA 431

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
            GL   + K    P  ++YS L+ G  K G +R    ++++M++   E D  + + L+ G
Sbjct: 432 CGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLING 491

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC     ++ L+ DA + F +   +    +  T   ++ +  + K    A+  +++ + M
Sbjct: 492 LC-----KQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAM-KVYYLMGM 545

Query: 400 GHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
            +I   T+T+  +I+     G++D+AL+L F M +    P   +Y  LI  L +L+KS  
Sbjct: 546 LNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSA 605

Query: 459 ACALYGAALKQGVIP 473
              ++    K  V P
Sbjct: 606 GLCIFDFMCKNAVAP 620



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 193/418 (46%), Gaps = 14/418 (3%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L   I I+  +  +G + +V   + L+           A   F +    G  P+ 
Sbjct: 388 VKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSI 447

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+S +I  +C   +  +   + + M      P+   +++L+N LCK G + +AL    Q
Sbjct: 448 LTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQ 507

Query: 181 MGRIGCKPNIQTYNCLLKGL----CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
               G  PN+ T N LL       C VG ++  Y  LM + N  +K D  TYT ++ G  
Sbjct: 508 AVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYY--LMGMLN--IKADTVTYTILIKGAA 563

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + GR +EA+ L  + +++   P+V+T+ TL +G CK      G+ +   M K    PD  
Sbjct: 564 QFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIA 623

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
            Y+ L+N   + G +  A+ +F  +V  G + D    N+++   C  +++    L+DA Q
Sbjct: 624 IYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMI--CCYCNFKR---LDDAVQ 678

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA-L 415
           +F KMT +    +  T+ I+I    +  + D+A++     +E G  P  +T++ +I    
Sbjct: 679 LFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYF 738

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +  ++  L L   M E+   P+  SY +LI  L +     +A   +  AL + ++P
Sbjct: 739 KSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLP 796



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 1/231 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IFD + K+     ++ +N L+         E A+  F      G  P+ +TF+ MI CYC
Sbjct: 609 IFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYC 668

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           N     +A ++   M      PN  TFTIL+++ C+ GR+ +A+ +  +M   G +PN+ 
Sbjct: 669 NFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLV 728

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           TY+CL+ G      + E+   L N +  + + P++ +Y+ ++DG CK G   EA      
Sbjct: 729 TYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRC 788

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           A+++ + P+V+ +  L  GYCK G   + + L   M      PD+    TL
Sbjct: 789 ALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 130/268 (48%), Gaps = 7/268 (2%)

Query: 61  IKASPLKERID-----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           IK +    R+D      F  +KKD     V  +  L+  L  L +    +  F       
Sbjct: 559 IKGAAQFGRVDEALMLFFQMLKKD-FKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNA 617

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           +AP+   ++++I  +  +     A  +   + + G  P+V TF  ++   C   RL +A+
Sbjct: 618 VAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAV 677

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           ++  +M     +PN  T+  L+   C  GR+++A  M   +  +G +P++ TY+ ++ G+
Sbjct: 678 QLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGY 737

Query: 236 CKVGRSNEA-MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            K     E+ ++L NE +E  + PN+V+++ L +G CK G   +     +    ++ LPD
Sbjct: 738 FKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPD 797

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMV 322
            I+Y+ L+ G  K G++  A+ ++  M+
Sbjct: 798 VIAYTILIRGYCKVGRLTEAMMLYDNML 825



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 103/195 (52%), Gaps = 1/195 (0%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+  + +F  + + G    V  FN ++         + AV+ F++ +S  L PN+ TF+I
Sbjct: 638 LEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTI 697

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA-LEVLDQMGRI 184
           +I  +C +    +A  +   M + G  PN+ T++ L++   KS  + E+ L++ ++M   
Sbjct: 698 LIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLEN 757

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
              PNI +Y+ L+ GLC  G ++EA        +  L PDV  YT ++ G+CKVGR  EA
Sbjct: 758 NIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEA 817

Query: 245 MELLNEAIERGVTPN 259
           M L +  +   +TP+
Sbjct: 818 MMLYDNMLLNRLTPD 832



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 105/271 (38%), Gaps = 67/271 (24%)

Query: 224 DVYTYTAVMDGFCKVGRSNEAME---LLNEAIERG------------------VTPNVV- 261
           D  T  A  DGFC +  +N ++    L+     +G                  V+PNVV 
Sbjct: 147 DYDTLDAFRDGFCDLDSTNHSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVY 206

Query: 262 -TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
               +L + +C E    K   L   M+++   P  + Y  ++N  +  G++   +   K 
Sbjct: 207 LLLGSLIDSHCVEVIVDKYGELCSAMREQ---PFSV-YEFVMNRFMNKGEVEMGLRFHKA 262

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           +V+ GF +D    N +L+G+    W + D               + V D           
Sbjct: 263 LVQGGFGLDIITCNKILKGI----WMQND---------------IGVADD---------- 293

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
                      + +  + +G  P  +TF+ +I A C EG +DKA +L  +M  +   P  
Sbjct: 294 -----------YFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDL 342

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGV 471
             Y +LI  L +  +  D   L   AL +G+
Sbjct: 343 IVYSILIDGLFKAGRLEDGQRLLLVALDKGI 373


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 194/385 (50%), Gaps = 7/385 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+ D + +DG  +    FN L+ A       + A+  F+E    GL P+  ++S +I   
Sbjct: 364 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 423

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      +A    + M   G  PN+ +FT L++ LC  G  K+  E+  +M   G  P+ 
Sbjct: 424 CKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDA 483

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
              N ++  LC  GRV EA +    V + G+KP+V +Y  ++DG+C VG+ +E+++  + 
Sbjct: 484 IFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDR 543

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G+ P+  T+N L NGY K G     + L + M +++     I+ + +L+GL + G+
Sbjct: 544 MVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGR 603

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I  A  ++ +MV  G ++     N++L GLC     E   +++A ++FE +  K    D 
Sbjct: 604 IVAARELYMKMVDRGTQLRIETYNTVLGGLC-----ENSCVDEALRMFEDLRSKEFELDV 658

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            T+ IVI  L K  + DEA       +  G +P  IT++ +I++   EG ++++  L   
Sbjct: 659 WTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLS 718

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEK 455
           M ++         +++I +L  LEK
Sbjct: 719 MEKNGCAADSHMLNVIIRRL--LEK 741



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 202/439 (46%), Gaps = 45/439 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS---YGLAPNSWTFSIMIR 128
           +F  + + G    V  +N L+  L +  + + A++     ++   Y  +PN  ++S +I 
Sbjct: 152 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIID 211

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
            +  + +  +A  + D M   G+ P+V T++ L++ LCK+  + +A  +L  M   G  P
Sbjct: 212 GFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMP 271

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N +TYN +++G C +G++EEA  +L  +   GL+PDV TY  ++  +CK+GR  EA  + 
Sbjct: 272 NTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVF 331

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL----------------------- 285
           +  + +G  PN   ++ L +GY  +G  +    LL L                       
Sbjct: 332 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKH 391

Query: 286 ------------MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
                       M++    PD +SYST+++ L K G++  AV  F +MV  G   +    
Sbjct: 392 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISF 451

Query: 334 NSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            SL+ GLC +  W++ + L      FE + + +   D      ++  L K  +  EA   
Sbjct: 452 TSLIHGLCSIGEWKKVEEL-----AFEMINRGIH-PDAIFMNTIMDNLCKEGRVVEAQDF 505

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
               I +G  P  +++N +I   C  GK+D+++     M      P   +Y+ L+    +
Sbjct: 506 FDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFK 565

Query: 453 LEKSYDACALYGAALKQGV 471
             +  DA ALY    ++ V
Sbjct: 566 NGRVEDALALYREMFRKDV 584



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 210/504 (41%), Gaps = 82/504 (16%)

Query: 52  LQAQRFV-DRIKASPL--KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET----- 103
           L+ +R + +R ++  L  ++ +++FD +       SV  FN +L  +   +   +     
Sbjct: 13  LELERIILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSA 72

Query: 104 --AVKFFSEASSYG---LAPNSWTFSIMIRCYCNKN------------------------ 134
             AV  F+  +  G   +A N +   I+IRC+C                           
Sbjct: 73  ALAVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTL 132

Query: 135 --------DFFEARKVIDCMF----DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM- 181
                   D       +D +F    + GY P+V ++  L+  LC   + +EALE+L  M 
Sbjct: 133 NQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMT 192

Query: 182 --GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
             G   C PN+ +Y+ ++ G    G V++AY +   +   G  PDV TY++++DG CK  
Sbjct: 193 ADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQ 252

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
             N+A  +L    ++GV PN  T+N +  GYC  G   + V LLK M      PD ++Y 
Sbjct: 253 AMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYI 312

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW--EEKDLL------ 351
            L+    K G+   A S+F  MVR G + +  + + LL G   K    + +DLL      
Sbjct: 313 LLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRD 372

Query: 352 ----------------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                                 + A   F +M +     D  +Y  VI  L K  + ++A
Sbjct: 373 GIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDA 432

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           + H +  +  G  P  I+F ++I  LC  G+  K   L F M      P     + ++  
Sbjct: 433 VYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDN 492

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
           L +  +  +A   +   +  GV P
Sbjct: 493 LCKEGRVVEAQDFFDMVIHIGVKP 516



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 199/468 (42%), Gaps = 65/468 (13%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD +   G    V  ++ L+  L        A          G+ PN+ T++IMIR YC
Sbjct: 225 LFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYC 284

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           +     EA +++  M  +G  P+V T+ +L+   CK GR  EA  V D M R G KPN  
Sbjct: 285 SLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNST 344

Query: 192 TYNCLLKG--------------------------------LCYV---GRVEEAYEMLMNV 216
            Y+ LL G                                +C     G V++A      +
Sbjct: 345 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 404

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           + +GL+PDV +Y+ V+   CK+GR  +A+   N+ +  G++PN+++F +L +G C  G  
Sbjct: 405 RQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 464

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            K   L   M  R   PD I  +T+++ L K G++  A   F  ++  G + +    N+L
Sbjct: 465 KKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTL 524

Query: 337 LRGLCM---------------------KSWEEKDLL---------EDAYQVFEKMTKKVS 366
           + G C                       SW    LL         EDA  ++ +M +K  
Sbjct: 525 IDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDV 584

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                T  I++  L +  +   A       ++ G   R  T+N V+  LC    +D+AL 
Sbjct: 585 KFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALR 644

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +   +          +++++I  L ++ +  +A +L+ A + +G +P 
Sbjct: 645 MFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPH 692



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 142/298 (47%), Gaps = 1/298 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  D FD +   G   +V  +N L+     + + + ++K F    S GL P+SW
Sbjct: 495 KEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSW 554

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  Y       +A  +   MF         T  I+++ L ++GR+  A E+  +M
Sbjct: 555 TYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKM 614

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +  I+TYN +L GLC    V+EA  M  ++++   + DV+T+  V++   KVGR 
Sbjct: 615 VDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRI 674

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA  L +  + RG  P+V+T++ +     +EG   +   L   M+K  C  D    + +
Sbjct: 675 DEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVI 734

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE-EKDLLEDAYQVF 358
           +  LL+ G +R A +   ++    F V+      L+  +  K ++ E   L + Y  F
Sbjct: 735 IRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIPIVSEKKYQKEVKFLPEKYHSF 792



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 20/253 (7%)

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK-------GVGLLKLMKKRN 290
           +GR  +A+ L +E + +    +V  FN++     +  +           V L   M +  
Sbjct: 28  LGRE-DALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSG 86

Query: 291 C---LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
                 ++     L+      G++  A + F   ++ G+ V    +N L++GLC     +
Sbjct: 87  VNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLC-----D 141

Query: 348 KDLLEDAYQ-VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL-IHLHHAIEMGH--IP 403
               +DA   VF +M +     D  +Y  +I+ L   KK+ EAL + LH   + G+   P
Sbjct: 142 GKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSP 201

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             ++++ +I     EG++DKA  L   M      P   +Y  LI  L + +    A A+ 
Sbjct: 202 NVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAIL 261

Query: 464 GAALKQGVIPQRK 476
                +GV+P  +
Sbjct: 262 QHMFDKGVMPNTR 274


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 198/425 (46%), Gaps = 45/425 (10%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +N LL AL+  N     V  +      G+ PN +T++++I+  C  +    AR+++
Sbjct: 126 TVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRML 185

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M   G  P+  + T ++++LCK  RL EA  +L +M  +G      +YN ++  LC  
Sbjct: 186 DEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVG-----ASYNAVVHALCGQ 240

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV------------------------- 238
            R+ E + ++  + + GL+PD   YT+++  FCK                          
Sbjct: 241 FRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTF 300

Query: 239 ----------GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
                     G+ ++A+ + N  +  G  P+ +++N L  G C  G   + + +   M K
Sbjct: 301 TVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGK 360

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
            +CLPD  +YSTL++G  K G +  A+SI+ +M   G + +  +  +++  LC     +K
Sbjct: 361 SDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLC-----KK 415

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
            + + A  + +KM+ +    +  T+  +IR+L    +   AL   H     G  P   T+
Sbjct: 416 VMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTY 475

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           N ++  L  EG  + AL +L  M  H    S  SY+  I+ L Q+    +A  L G  + 
Sbjct: 476 NELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMII 535

Query: 469 QGVIP 473
           QG+ P
Sbjct: 536 QGIQP 540



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 182/383 (47%), Gaps = 7/383 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   + D +   G       +  ++ A     E   A    +   + G  PN  TF++
Sbjct: 243 MREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTV 302

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++ + +     +A  + + M   G+ P+  ++ +L+  LC  G LK AL V   MG+  
Sbjct: 303 LVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSD 362

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P+++TY+ L+ G    G ++ A  +  ++ N G KP+V  YT ++D  CK    ++A 
Sbjct: 363 CLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAE 422

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L+++       PN +TFNTL    C  G   + + +   M++  C P+  +Y+ LL+GL
Sbjct: 423 NLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGL 482

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G    A+ +  EM+  GFE+     N+ + GLC     +  ++++A  +  +M  + 
Sbjct: 483 FREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLC-----QMRMIKEAMILLGRMIIQG 537

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKA 424
              D  T+  +I    K      A   L   ++  + PR I  + +++  LC + K+D A
Sbjct: 538 IQPDAFTFNAIIHAYCKEGNVRAAAWMLGR-MDAVNCPRNIVAYTSLMSGLCSQHKLDDA 596

Query: 425 LLLLFLMYEHAKIPSRTSYDMLI 447
           ++ L  M      P+  ++++L+
Sbjct: 597 MVYLLKMLYEGICPNEATWNVLV 619



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 136/275 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK  + +F  + K      V  ++ L+       + + A+  +++ ++ G  PN   ++ 
Sbjct: 348 LKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTN 407

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           M+   C K  F +A  +ID M      PN  TF  L+ SLC  GR   AL V   M R G
Sbjct: 408 MVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYG 467

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN +TYN LL GL   G  E+A  ML  + N G +  + +Y   + G C++    EAM
Sbjct: 468 CPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAM 527

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL   I +G+ P+  TFN + + YCKEG       +L  M   NC  + ++Y++L++GL
Sbjct: 528 ILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGL 587

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
               K+  A+    +M+  G   +E   N L+RG+
Sbjct: 588 CSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 156/371 (42%), Gaps = 40/371 (10%)

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           F+ AR  + C       P V  +  L+++L +   +   + V D M + G +PN+ TYN 
Sbjct: 113 FYRARHDLGCA-----APTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNL 167

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL------- 248
           L+K LC   RV  A  ML  +   G +PD  ++T ++   CK+ R +EA  +L       
Sbjct: 168 LIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVG 227

Query: 249 -----------------------NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
                                  +E + RG+ P+ V + ++   +CK         +L  
Sbjct: 228 ASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILAR 287

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M    C+P+  +++ L+ G    GK+  A+ ++  MV  G+       N L+RGLC    
Sbjct: 288 MVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLC---- 343

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                L+ A  VF  M K   + D  TY  +I    K    D A+   +     G  P  
Sbjct: 344 -HIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNV 402

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           + + N++  LC +   D+A  L+  M      P+  +++ LI  L  L ++  A  ++  
Sbjct: 403 VVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHG 462

Query: 466 ALKQGVIPQRK 476
             + G  P  +
Sbjct: 463 MRRYGCPPNDR 473



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/354 (22%), Positives = 163/354 (46%), Gaps = 5/354 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+    I   +  +G   +V  F  L+       +   A+  ++   + G AP++ 
Sbjct: 274 KARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTI 333

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++++IR  C+  D   A  V  CM  +   P+V T++ L++   K+G L  A+ + + M
Sbjct: 334 SYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDM 393

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GCKPN+  Y  ++  LC     ++A  ++  +  +   P+  T+  ++   C +GR+
Sbjct: 394 TNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRA 453

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+ + +     G  PN  T+N L +G  +EG     + +L  M         +SY+T 
Sbjct: 454 GRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTT 513

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL +   I+ A+ +   M+  G + D    N+++   C    +E ++   A+ +  +M
Sbjct: 514 ISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYC----KEGNVRAAAW-MLGRM 568

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
                  +   Y  ++  L    K D+A+++L   +  G  P   T+N +++ +
Sbjct: 569 DAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 208/473 (43%), Gaps = 43/473 (9%)

Query: 35  ASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLM 93
           A L   E +D+   P  +     +D  ++   +++   I D +   G   ++  +N LL 
Sbjct: 295 AKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLN 354

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
            +    + E A++   E    G+ P+S T+S++I  +C   +   A +++D M      P
Sbjct: 355 GVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAP 414

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
            V T+++++N LC+ G L+    +L +M   G KPN   Y  L+      GRVEE+  +L
Sbjct: 415 TVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 474

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER------------------- 254
             ++  G+ PDV+ Y +++ GFCK  R  EA   L E +ER                   
Sbjct: 475 ERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA 534

Query: 255 ----------------GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
                           GV PNV  +  L  G+CKEG   +   + + +  R  L D  +Y
Sbjct: 535 GEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTY 594

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           S L++GL + GK+  A  IF E+   G   +    NSL+ G C +   +K     A Q+ 
Sbjct: 595 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDK-----ASQLL 649

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE-MGHIPRTITFNNVIQALCG 417
           E+M  K    D  TY I+I  L K  + + A  +L   IE  G  P  +T+  ++   C 
Sbjct: 650 EEMCIKGINPDIVTYNILIDGLCKAGEIERAK-NLFDDIEGRGLTPNCVTYAAMVDGYCK 708

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
                 A  LL  M      P    Y++++    + EK   A  L+   L++G
Sbjct: 709 SKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 761



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 203/443 (45%), Gaps = 32/443 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E I++  S+   G    +  ++ L+    M      A     E    GL P   
Sbjct: 253 KARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 312

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +  + D  +A ++ D M   G   N+  +  L+N +CK+G++++ALE++ +M
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 372

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P+ QTY+ L++G C    +  A+E+L  +K   L P V TY+ +++G C+ G  
Sbjct: 373 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 432

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
                +L E +  G+ PN V + TL   + KEG   +   +L+ M+++  LPD   Y++L
Sbjct: 433 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 492

Query: 302 LNGLLKWGKIRPAVSIFKEMVR---------FG-----------FEVDERMMNSLLR--- 338
           + G  K  ++  A +   EM+          +G            E+ +R  N +L    
Sbjct: 493 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 552

Query: 339 --------GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                    L     +E ++ E A+ VF  +  +  + D  TY ++I  L +  K  EA 
Sbjct: 553 LPNVGIYTALIEGHCKEGNVTE-AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 611

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                  E G +P   T+N++I   C +G +DKA  LL  M      P   +Y++LI  L
Sbjct: 612 GIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGL 671

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +  +   A  L+     +G+ P
Sbjct: 672 CKAGEIERAKNLFDDIEGRGLTP 694



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 177/372 (47%), Gaps = 6/372 (1%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           E E A ++F+E  S G+ PN   ++ +I  +C + +  EA  V   +       +V T++
Sbjct: 536 EMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYS 595

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           +L++ L ++G++ EA  +  ++   G  PN  TYN L+ G C  G V++A ++L  +   
Sbjct: 596 VLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIK 655

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G+ PD+ TY  ++DG CK G    A  L ++   RG+TPN VT+  + +GYCK   P   
Sbjct: 656 GINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 715

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             LL+ M  R   PD   Y+ +LN   K  K   A+ +F+EM+  GF       N+L+ G
Sbjct: 716 FQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEG 774

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
            C     +   L++A  + E+M +K  + +  TY  +I    K     EA        E 
Sbjct: 775 YC-----KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 829

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
             +P   T+ +++      G + +   L   M      P + +Y ++I    +     +A
Sbjct: 830 NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 889

Query: 460 CALYGAALKQGV 471
           C L    L +G+
Sbjct: 890 CKLKDEILVKGM 901



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 191/414 (46%), Gaps = 6/414 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E   I + +++ G    V  +N L++        E A  +  E     L PN+ 
Sbjct: 463 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 522

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+   I  Y    +   A +  + M   G  PNV  +T L+   CK G + EA  V   +
Sbjct: 523 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 582

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                  ++QTY+ L+ GL   G++ EA+ +   ++  GL P+ +TY +++ G CK G  
Sbjct: 583 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 642

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A +LL E   +G+ P++VT+N L +G CK G   +   L   ++ R   P+ ++Y+ +
Sbjct: 643 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAM 702

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K      A  + +EM+  G   D  + N +L   C    EEK   E A  +F++M
Sbjct: 703 VDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCK---EEK--FEKALDLFQEM 757

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K       ++  +I    K  K  EA   L   IE   IP  +T+ ++I   C  G +
Sbjct: 758 LEK-GFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMM 816

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            +A  L   M E   +P+  +Y  L+     +    +  AL+   + +G+ P +
Sbjct: 817 GEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 870



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   +F  I        V  ++ L+  L    +   A   FSE    GL PN++
Sbjct: 568 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 627

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C + +  +A ++++ M   G +P++ T+ IL++ LCK+G ++ A  + D +
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 687

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN  TY  ++ G C       A+++L  +   G+ PD + Y  +++  CK  + 
Sbjct: 688 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 747

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A++L  E +E+G   + V+FNTL  GYCK G   +   LL+ M ++  +P+ ++Y++L
Sbjct: 748 EKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 806

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++   K G +  A  ++ EM         +   SLL G     +     + +   +FE+M
Sbjct: 807 IDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHG-----YHNIGNMSEVSALFEEM 861

Query: 362 TKKVSVTDPGTYGIVI 377
             K    D  TY ++I
Sbjct: 862 VAKGIEPDKMTYYVMI 877



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 168/378 (44%), Gaps = 40/378 (10%)

Query: 131 CNKNDFFEARKVIDCMFDNG------------------YHPNVTTFTILVNSLCKSGRLK 172
           CN N +  A  +I C+  N                     PN   F +L++S  K G L 
Sbjct: 112 CNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLV 171

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           EA+ V         +P++ + N LL  L    +VE  +++   +    + PDVYTYT ++
Sbjct: 172 EAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMI 231

Query: 233 DGFCKVGRSNEA----------MELLNEAIE-------RGVTPNVVTFNTLFNGYCKEGT 275
              CKVG   +A            LL+EAIE       +G+ P++ T++ L NG+C E  
Sbjct: 232 SAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKR 291

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             +   +L  M      P+ I+Y+ L++G ++ G I  A  I  EMV  G E +  + N+
Sbjct: 292 SREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNT 351

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           LL G+C     +   +E A ++ ++M +K    D  TY ++I    +G+    A   L  
Sbjct: 352 LLNGVC-----KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDE 406

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
             +    P  +T++ +I  LC  G +     +L  M  +   P+   Y  L+T   +  +
Sbjct: 407 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 466

Query: 456 SYDACALYGAALKQGVIP 473
             ++  +     +QG++P
Sbjct: 467 VEESRMILERMREQGILP 484



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 139/300 (46%), Gaps = 10/300 (3%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP  +     +D + KA  ++   ++FD I+  G   +   +  ++           A +
Sbjct: 658 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 717

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
              E    G+ P+++ +++++   C +  F +A  +   M + G+   V+ F  L+   C
Sbjct: 718 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYC 776

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSG+L+EA  +L++M      PN  TY  L+   C  G + EA  + + ++   + P   
Sbjct: 777 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAK 836

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TYT+++ G+  +G  +E   L  E + +G+ P+ +T+  + + YC+EG  M+   L   +
Sbjct: 837 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 896

Query: 287 KKRNCLPDKISY-------STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             +  +P K  +       S +  G    G +  A  + + MV+FG+  +   +  L+ G
Sbjct: 897 LVKG-MPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955


>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 482

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 204/410 (49%), Gaps = 20/410 (4%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFF---SEASSYGLAPNSWTFSIMIRCY 130
           +S+      W+    N +L  L   N    A+ FF   S   SY    +S+  +I I   
Sbjct: 47  ESLHSPSIQWTPQLVNTILKRL--WNHGPKALHFFKILSHHPSYCHQASSFDHAIDI--- 101

Query: 131 CNK-NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           C +  DF     ++  M      P+  TF I+       G+   A+ V   M   GC  +
Sbjct: 102 CARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQD 161

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + ++N +L  LC   RVE AY +   +K    K D  +Y  +++G+C + R+ +A+E+L 
Sbjct: 162 LSSFNTILDVLCKSKRVEMAYNLFKALKGK-FKADCVSYNIIVNGWCLIKRTPKALEMLK 220

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E +ERG+TPN+ T+N + NGY + G   +  G    MKKR C  D ++Y+++++GL   G
Sbjct: 221 EMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVG 280

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           +I+ A ++F +MV+ G        N+L++ LC     +KD +E+A  +FE+M K+  V +
Sbjct: 281 EIKRARNVFNQMVKDGVLPSVATFNALIQILC-----KKDSVENAILIFEEMVKRGYVPN 335

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY +VIR L    +   A+  +    +    P   T+N +I+  C  G+I+K L L  
Sbjct: 336 SITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQ 395

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL----KQGVIPQR 475
            M     +P+  +Y++LI  +  + K+ D   + G  L     +G +P++
Sbjct: 396 KMGNGDCLPNLDTYNILINSM-FVRKNSDNLLVAGKLLVEMVDRGFLPRK 444



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 176/395 (44%), Gaps = 22/395 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNW-------------SVSDFNDLLMALVMLNEQETAVKFF 108
           +AS     IDI   ++   T W             S   F  +      + +   AV  F
Sbjct: 91  QASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVF 150

Query: 109 SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS 168
                YG   +  +F+ ++   C       A  +   +    +  +  ++ I+VN  C  
Sbjct: 151 MSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKAL-KGKFKADCVSYNIIVNGWCLI 209

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
            R  +ALE+L +M   G  PN+ TYN +L G    G+  EA+   + +K      DV TY
Sbjct: 210 KRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTY 269

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           T+V+ G   VG    A  + N+ ++ GV P+V TFN L    CK+ +    + + + M K
Sbjct: 270 TSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVK 329

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           R  +P+ I+Y+ ++ GL   G+++ A+ + + M     E + +  N L+R  C     EK
Sbjct: 330 RGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEK 389

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM---GHIPRT 405
            L      +F+KM     + +  TY I+I ++   K +D  L+     +EM   G +PR 
Sbjct: 390 GL-----DLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRK 444

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
           +TFN V+  L   G  D A  +L L     ++P +
Sbjct: 445 LTFNRVLDGLLLTGNQDFAKEILSLQGGCGRLPRK 479


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 177/369 (47%), Gaps = 40/369 (10%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           APN +TF+I+I   C + +  EAR +   M + G  P+V TF  L++   K G L E  +
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV----------- 225
           ++++M R GCK ++ TYN L+   C  GR+E AY     +K +G+  +V           
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 226 ------------------------YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
                                   +TYT ++DG CK GR ++A+ LL+E + +GV  NVV
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+  L +G CKE    +   +L++M+K     +++ Y+TL++G         A+ +  EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G E+D  +  +L++GLC         L++A  +  KM +     +   Y  ++    
Sbjct: 425 KNKGLELDISLYGALIQGLC-----NVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACF 479

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K  K  EA+  L   ++ G  P  IT+  +I  LC  G ID+A+     M +    P+  
Sbjct: 480 KSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQ 539

Query: 442 SYDMLITKL 450
           +Y  L+  L
Sbjct: 540 AYTALVDGL 548



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 189/436 (43%), Gaps = 40/436 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   + + +++ G    V  +N L+         ETA  +F+     G+  N  
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVV 294

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS  +  +C +    EA K+   M   G   N  T+T L++  CK+GRL +A+ +LD+M
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML-----------------------MN--- 215
            R G   N+ TY  L+ GLC   +V EA ++L                       MN   
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 216 ---------VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                    +KN GL+ D+  Y A++ G C V + +EA  LL +  E G+ PN + + T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +   K G   + + +L+ +      P+ I+Y  L++GL K G I  A+S F +M   G 
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + + +   +L+ GLC     +   L +A Q+F +M  K    D   Y  ++    K    
Sbjct: 535 DPNVQAYTALVDGLC-----KNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +A       I+ G       +   I   C    + +A  +   M  H   P R  Y+ L
Sbjct: 590 HDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCL 649

Query: 447 ITKLDQLEKSYDACAL 462
           I+K  +L    +A +L
Sbjct: 650 ISKYQKLGNLEEAISL 665



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 178/380 (46%), Gaps = 36/380 (9%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFS-IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           + AV+  +      + PN+ T + I++R   +++      +++  +F+    PNV TF I
Sbjct: 139 DDAVRAVARVRELRVPPNTRTCNHILLRLARDRSG-----RLVRRLFEQLPAPNVFTFNI 193

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           +++ LCK G L EA  +  +M  +GC P++ T+N L+ G    G ++E  +++  ++  G
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
            K DV TY A+++ FCK GR   A          GV  NVVTF+T  + +CKEG   + +
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            L   M+ R    ++ +Y+ L++G  K G++  A+ +  EMVR G  ++      L+ GL
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 341 C--MKSWEEKDLL----------------------------EDAYQVFEKMTKKVSVTDP 370
           C   K  E +D+L                            E A  +  +M  K    D 
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             YG +I+ L    K DEA   L    E G  P  I +  ++ A    GK+ +A+ +L  
Sbjct: 434 SLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQK 493

Query: 431 MYEHAKIPSRTSYDMLITKL 450
           + +    P+  +Y  LI  L
Sbjct: 494 ILDSGFQPNVITYCALIDGL 513



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 181/410 (44%), Gaps = 5/410 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   +F  +K+ G    V  FN L+       E +   +   E    G   +  
Sbjct: 200 KEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVV 259

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I C+C       A      M   G   NV TF+  V++ CK G ++EA+++  QM
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   N  TY CL+ G C  GR+++A  +L  +   G+  +V TYT ++DG CK  + 
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA ++L    + GV  N + + TL +G+       K +GLL  MK +    D   Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL    K+  A S+  +M   G E +  +  +++   C KS +    + +A  + +K+
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDA-CFKSGK----VPEAIAMLQKI 494

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  +  TY  +I  L K    DEA+ H +   ++G  P    +  ++  LC  G +
Sbjct: 495 LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCL 554

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           ++A+ L   M        +  Y  L+    +    +DA AL    +  G+
Sbjct: 555 NEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 155/312 (49%), Gaps = 6/312 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  D+   ++K G   +   +  L+    M    E A+   SE  + GL  +  
Sbjct: 375 KERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDIS 434

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  +I+  CN +   EA+ ++  M ++G  PN   +T ++++  KSG++ EA+ +L ++
Sbjct: 435 LYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI 494

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +PN+ TY  L+ GLC  G ++EA      +++ GL P+V  YTA++DG CK G  
Sbjct: 495 LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCL 554

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           NEA++L NE + +G++ + V +  L +GY K+G       L   M       D   Y+  
Sbjct: 555 NEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCF 614

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G      +  A  +F EM+  G   D  + N L+       +++   LE+A  + ++M
Sbjct: 615 ISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI-----SKYQKLGNLEEAISLQDEM 669

Query: 362 TKKV-SVTDPGT 372
            + + S TD  T
Sbjct: 670 ERVLPSCTDSDT 681


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 176/364 (48%), Gaps = 5/364 (1%)

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           +  S G  P+ W F+  +   C +N    A ++   M   G  P+V ++TI++++LC + 
Sbjct: 109 DMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAK 168

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           R  EA +V  ++   G  P+ +    L+ GLC  GRV+ AYE+++ V   G+K +   Y 
Sbjct: 169 RFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYN 228

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           A++DGFC++GR ++AM++       G  P++VT+N L N  C+EG   + V L++ M++ 
Sbjct: 229 ALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERS 288

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD  SY+ LL G  K   +  A  +  E ++     D    N+++   C      K 
Sbjct: 289 GVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRK- 347

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
                Y++FE+M  K    D  T+ I+I    +   T      L    +M  +P  I + 
Sbjct: 348 ----GYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYT 403

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            V+  LC  GK+D A  +   M E+   P   SY+ L+    +  +  DA  L+     +
Sbjct: 404 AVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSK 463

Query: 470 GVIP 473
           G+ P
Sbjct: 464 GLYP 467



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 188/439 (42%), Gaps = 86/439 (19%)

Query: 55  QRFVDRIKASPLKERIDIFDSIKKD----GTNWSVSDFNDLLMALVMLNEQETAVKFFSE 110
            RF+  + ++P    + +  S+  D    G    +  FN  L  L   N  ETA++ F  
Sbjct: 85  SRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHS 144

Query: 111 ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP----------------- 153
             S G  P+  +++I+I   CN   F EA KV   + D G  P                 
Sbjct: 145 MPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGR 204

Query: 154 ------------------NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
                             N   +  L++  C+ GR+ +A+++   M R GC P++ TYN 
Sbjct: 205 VDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNI 264

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG---------------- 239
           LL   C  G V+EA  ++  ++  G++PD+Y+Y  ++ GFCK                  
Sbjct: 265 LLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTK 324

Query: 240 -------------------RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
                              R+ +  EL  E   +G+ P++VTFN L + + +EG+     
Sbjct: 325 GMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVK 384

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            LL  M K   LPD I Y+ +++ L K GK+  A S+F++MV  G   D    N+LL G 
Sbjct: 385 KLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGF 444

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C  S      + DA  +F++M  K    D  TY +++  L +GKK   A       +E G
Sbjct: 445 CKTSR-----VMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERG 499

Query: 401 -----HIPRTITFNNVIQA 414
                H+  T+   N IQ+
Sbjct: 500 FTLNRHLSETLV--NAIQS 516



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/351 (18%), Positives = 142/351 (40%), Gaps = 44/351 (12%)

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE---------- 211
           ++ L K+G + +A+ + DQM    C+     YN  +  L    R+  A+           
Sbjct: 17  ISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRG 76

Query: 212 -----------------------------MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
                                        +L+++ + G  PD++ +   ++  C+  R  
Sbjct: 77  FSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLE 136

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
            A+EL +    +G  P+VV++  + +  C      +   + + +  +   PD  +   L+
Sbjct: 137 TALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALV 196

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
            GL   G++  A  +   +++ G +V+  + N+L+ G C     +K +   A+     M+
Sbjct: 197 VGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAF-----MS 251

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +   V D  TY I++    +    DEA+  +      G  P   ++N +++  C    +D
Sbjct: 252 RTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVD 311

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +A L++    +   +    SY+ +IT   +  ++     L+     +G+ P
Sbjct: 312 RAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRP 362



 Score = 44.7 bits (104), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 15/189 (7%)

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFG---FEVD-ERMMNSLLRGLCMKSWEEKDL 350
           +++Y + ++ L+K G I  A+ +F +M       F VD  R +  LLR         +  
Sbjct: 10  RLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLR-------HSRLH 62

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG-KKTDEALIH--LHHAIEMGHIPRTIT 407
           L   Y     + +  S+  P TY   I  L       +  LIH  L     +G +P    
Sbjct: 63  LAHHYYRRHVIPRGFSLL-PFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWA 121

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           FN  +  LC + +++ AL L   M    + P   SY ++I  L   ++  +A  ++   +
Sbjct: 122 FNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLI 181

Query: 468 KQGVIPQRK 476
            +G+ P  K
Sbjct: 182 DKGLSPDYK 190


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 177/369 (47%), Gaps = 40/369 (10%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           APN +TF+I+I   C + +  EAR +   M + G  P+V TF  L++   K G L E  +
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV----------- 225
           ++++M R GCK ++ TYN L+   C  GR+E AY     +K +G+  +V           
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 226 ------------------------YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
                                   +TYT ++DG CK GR ++A+ LL+E + +GV  NVV
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+  L +G CKE    +   +L++M+K     +++ Y+TL++G         A+ +  EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G E+D  +  +L++GLC         L++A  +  KM +     +   Y  ++    
Sbjct: 425 KNKGLELDISLYGALIQGLC-----NVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACF 479

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K  K  EA+  L   ++ G  P  IT+  +I  LC  G ID+A+     M +    P+  
Sbjct: 480 KSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQ 539

Query: 442 SYDMLITKL 450
           +Y  L+  L
Sbjct: 540 AYTALVDGL 548



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 189/436 (43%), Gaps = 40/436 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   + + +++ G    V  +N L+         ETA  +F+     G+  N  
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVV 294

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS  +  +C +    EA K+   M   G   N  T+T L++  CK+GRL +A+ +LD+M
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML-----------------------MN--- 215
            R G   N+ TY  L+ GLC   +V EA ++L                       MN   
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 216 ---------VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                    +KN GL+ D+  Y A++ G C V + +EA  LL +  E G+ PN + + T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +   K G   + + +L+ +      P+ I+Y  L++GL K G I  A+S F +M   G 
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + + +   +L+ GLC     +   L +A Q+F +M  K    D   Y  ++    K    
Sbjct: 535 DPNVQAYTALVDGLC-----KNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +A       I+ G       +   I   C    + +A  +   M  H   P R  Y+ L
Sbjct: 590 HDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCL 649

Query: 447 ITKLDQLEKSYDACAL 462
           I+K  +L    +A +L
Sbjct: 650 ISKYQKLGNLEEAISL 665



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 178/380 (46%), Gaps = 36/380 (9%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFS-IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           + AV+  +      + PN+ T + I++R   +++      +++  +F+    PNV TF I
Sbjct: 139 DDAVRAVARVRELRVPPNTRTCNHILLRLARDRSG-----RLVRRLFEQLPAPNVFTFNI 193

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           +++ LCK G L EA  +  +M  +GC P++ T+N L+ G    G ++E  +++  ++  G
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
            K DV TY A+++ FCK GR   A          GV  NVVTF+T  + +CKEG   + +
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            L   M+ R    ++ +Y+ L++G  K G++  A+ +  EMVR G  ++      L+ GL
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 341 C--MKSWEEKDLL----------------------------EDAYQVFEKMTKKVSVTDP 370
           C   K  E +D+L                            E A  +  +M  K    D 
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             YG +I+ L    K DEA   L    E G  P  I +  ++ A    GK+ +A+ +L  
Sbjct: 434 SLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQK 493

Query: 431 MYEHAKIPSRTSYDMLITKL 450
           + +    P+  +Y  LI  L
Sbjct: 494 ILDSGFQPNVITYCALIDGL 513



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 181/410 (44%), Gaps = 5/410 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   +F  +K+ G    V  FN L+       E +   +   E    G   +  
Sbjct: 200 KEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVV 259

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I C+C       A      M   G   NV TF+  V++ CK G ++EA+++  QM
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   N  TY CL+ G C  GR+++A  +L  +   G+  +V TYT ++DG CK  + 
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA ++L    + GV  N + + TL +G+       K +GLL  MK +    D   Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL    K+  A S+  +M   G E +  +  +++   C KS +    + +A  + +K+
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDA-CFKSGK----VPEAIAMLQKI 494

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  +  TY  +I  L K    DEA+ H +   ++G  P    +  ++  LC  G +
Sbjct: 495 LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCL 554

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           ++A+ L   M        +  Y  L+    +    +DA AL    +  G+
Sbjct: 555 NEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 155/312 (49%), Gaps = 6/312 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  D+   ++K G   +   +  L+    M    E A+   SE  + GL  +  
Sbjct: 375 KERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDIS 434

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  +I+  CN +   EA+ ++  M ++G  PN   +T ++++  KSG++ EA+ +L ++
Sbjct: 435 LYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI 494

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +PN+ TY  L+ GLC  G ++EA      +++ GL P+V  YTA++DG CK G  
Sbjct: 495 LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCL 554

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           NEA++L NE + +G++ + V +  L +GY K+G       L   M       D   Y+  
Sbjct: 555 NEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCF 614

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G      +  A  +F EM+  G   D  + N L+       +++   LE+A  + ++M
Sbjct: 615 ISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI-----SKYQKLGNLEEAISLQDEM 669

Query: 362 TKKV-SVTDPGT 372
            + + S TD  T
Sbjct: 670 ERVLPSCTDSDT 681


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 191/385 (49%), Gaps = 5/385 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  D+ + +  +G + +   FN    A       + A+  F++   +GL+P++ ++  
Sbjct: 11  LSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGA 70

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A    + M + G  PN+  F+ LV  LC   + ++  E+  +M  +G
Sbjct: 71  LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVG 130

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PNI  +N +L  LC  GRV E   ++ +++  G++PDV +Y  ++DG C  G  +EA 
Sbjct: 131 IHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEAS 190

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +LL   +  G+ PN  ++NTL +GYCK G       L + M      P  ++Y+T+L+GL
Sbjct: 191 KLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGL 250

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            +  +   A  ++  M+  G +      N++L GLC     + + +++A+++F+ +  K 
Sbjct: 251 FQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLC-----KSNCVDEAFKMFQSLCSKG 305

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  T+ I+I  L KG + ++A+         G +P  +T+  V + L  EG +++  
Sbjct: 306 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFD 365

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL 450
            L   M ++   P+    + L+ +L
Sbjct: 366 SLFSAMEKNGTAPNSQMLNALVRRL 390



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 169/348 (48%), Gaps = 5/348 (1%)

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           M+  Y NK    E   +++ M  NG  PN   F I  ++  K G + +A+++ ++M + G
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  +Y  L+  LC +GRV++A      + N+G+ P++  +++++ G C + +  +  
Sbjct: 61  LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           EL  E +  G+ PN+V FNT+    CKEG  M+G  L+  ++     PD ISY+TL++G 
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G I  A  + + MV  G + +    N+LL G C     +   ++ AY +F KM    
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYC-----KAGRIDSAYSLFRKMLSNG 235

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
                 TY  ++  L + K+  EA     + I  G      T+N ++  LC    +D+A 
Sbjct: 236 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAF 295

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   +       +  ++ ++I  L +  +  DA  L+ A    G++P
Sbjct: 296 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVP 343



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 173/362 (47%), Gaps = 5/362 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G++PN   F+I    Y       +A  + + M  +G  P+  ++  L+++LCK GR+ +A
Sbjct: 25  GISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDA 84

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
               +QM   G  PNI  ++ L+ GLC + + E+  E+   + N G+ P++  +  ++  
Sbjct: 85  EVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCN 144

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK GR  E   L++     GV P+V+++NTL +G+C  GT  +   LL+ M      P+
Sbjct: 145 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPN 204

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
             SY+TLL+G  K G+I  A S+F++M+  G        N++L GL    ++ K   E A
Sbjct: 205 SFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGL----FQTKRFSE-A 259

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            +++  M    +     TY  ++  L K    DEA          G     ITF  +I A
Sbjct: 260 KELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 319

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           L   G+ + A+ L   +  +  +P   +Y ++   L +     +  +L+ A  K G  P 
Sbjct: 320 LLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPN 379

Query: 475 RK 476
            +
Sbjct: 380 SQ 381


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 184/413 (44%), Gaps = 15/413 (3%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+F  + K G     +  N LL  L          +   +     + PN  TF I+I   
Sbjct: 291 DLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHM 350

Query: 131 CNKNDFFEARKVIDCM--------FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM- 181
           C      +A +V++ M              P+V  +  L++ LCK GR +E L ++++M 
Sbjct: 351 CKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMR 410

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC P+  TYNCL+ G C  G +E+  E+   +  +G+ P+V T   ++ G C+ GR 
Sbjct: 411 SQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRV 470

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+    EA  RG+  + VT+  L N +C      K + L   M K  C PD I Y TL
Sbjct: 471 SSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTL 530

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  + G++  A  +  E+ + G   D    N+L+ G C       +     +++ ++M
Sbjct: 531 ISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFC-----RTNKFHRVFEMLKEM 585

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +     D  TY  +I    K      A   +   I+ G +P   T+  VI A C  G  
Sbjct: 586 EEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNG 645

Query: 422 DKALLLLFLMYEHAKIPSRTS-YDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++A+ +   M   +K+P  T  Y++LI  L +  K   A +L       GV P
Sbjct: 646 NEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTP 698



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 168/320 (52%), Gaps = 6/320 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++  ++FD + K+G   +V   N L+  +       +AV FF EA   G+  ++ 
Sbjct: 431 KAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAV 490

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +CN N+F +A ++ + M  +G  P+   +  L++   ++GR+ +A  VL ++
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            ++G +P+   YN L+ G C   +    +EML  ++  GLKPD  TY  ++    K G  
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDL 610

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL-PDKISYST 300
             A +++ + I+ GV P V T+  + N YC  G   + + + K MK  + + P+ + Y+ 
Sbjct: 611 KFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNI 670

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+N L K  K++ AVS+ ++M  +G   +    N++ +GL     +EKD LE  ++  ++
Sbjct: 671 LINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGL----RDEKD-LEKVFEFMDR 725

Query: 361 MTKKVSVTDPGTYGIVIRTL 380
           M +     D  T  I+   L
Sbjct: 726 MIEHACNPDYITMEILTEWL 745



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 171/354 (48%), Gaps = 16/354 (4%)

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVTTFTILVNSLCKSGRL 171
           S  + P+   ++ +I   C      E   +++ M    G  P+  T+  L++  CK+G +
Sbjct: 376 SVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEI 435

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
           ++  E+ D+M + G  PN+ T N L+ G+C  GRV  A    +  +  G+K D  TYTA+
Sbjct: 436 EKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTAL 495

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           ++ FC V    +AMEL NE ++ G +P+ + + TL +G+ + G       +L  +KK   
Sbjct: 496 INAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGI 555

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL- 350
            PD + Y+TL+ G  +  K      + KEM   G + D    N+L+      ++  K+  
Sbjct: 556 RPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLI------AYASKNGD 609

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTIT 407
           L+ A +V  KM K   V    TYG VI      G G +  E    +  A ++   P T+ 
Sbjct: 610 LKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVP--PNTVI 667

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKSYD 458
           +N +I +LC   K+  A+ L+  M      P+ T+Y+ +   L     LEK ++
Sbjct: 668 YNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFE 721



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 193/418 (46%), Gaps = 20/418 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNS 120
           K S  KE   I  S++ D     V  +N L+  L  +  Q+  +       S  G AP++
Sbjct: 365 KMSGGKESGGISVSVEPD-----VVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDT 419

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I  +C   +  + +++ D M   G  PNV T   LV  +C++GR+  A+    +
Sbjct: 420 ITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVE 479

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             R G K +  TY  L+   C V   E+A E+   +   G  PD   Y  ++ GF + GR
Sbjct: 480 AQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGR 539

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  +L E  + G+ P+ V +NTL  G+C+     +   +LK M++    PD I+Y+T
Sbjct: 540 MADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNT 599

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+    K G ++ A  + ++M++ G         +++   C+          +A ++F+ 
Sbjct: 600 LIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNG-----NEAMEIFKD 654

Query: 361 MTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           M K  S   P T  Y I+I +L K  K   A+  +      G  P T T+N + + L  E
Sbjct: 655 M-KAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDE 713

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDML------ITKLDQLEKSYDACALYGAALKQG 470
             ++K    +  M EHA  P   + ++L      + ++++L+K    C +  +  ++ 
Sbjct: 714 KDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCEVSSSTAQKA 771



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 154/352 (43%), Gaps = 39/352 (11%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+  LC++ +     ++  +M ++G        N LL GL   G      E++  +    
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNE--------AIERGVTPNVVTFNTLFNGYCK 272
           ++P+V T+  +++  CK  R ++A+E+L +         I   V P+VV +NTL +G CK
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395

Query: 273 EGTPMKGVGLLKLMK-KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
            G   +G+GL++ M+ ++ C PD I+Y+ L++G  K G+I     +F EM + G   +  
Sbjct: 396 VGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVV 455

Query: 332 MMNSLLRGLC------------------------------MKSWEEKDLLEDAYQVFEKM 361
            +N+L+ G+C                              + ++   +  E A ++F +M
Sbjct: 456 TVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEM 515

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K     D   Y  +I    +  +  +A   L    ++G  P T+ +N +I   C   K 
Sbjct: 516 LKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKF 575

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   +L  M E    P   +Y+ LI    +      A  +    +K GV+P
Sbjct: 576 HRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVP 627



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 137/328 (41%), Gaps = 24/328 (7%)

Query: 165 LCKSGRLKEALEVLDQM----GRIGCKPNIQTYNCLLKGLCYVGRVEE------AYEMLM 214
           L +SGR+K+AL+V+D+M        C+PN  T + L   L    R EE         +++
Sbjct: 200 LLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVL 259

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
                G+    +    ++   C+  ++N   +L  E I+ G        N+L  G  +EG
Sbjct: 260 KFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREG 319

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM--------VRFGF 326
              +   L++ M + +  P+ +++  L+N + K+ ++  A+ + ++M        +    
Sbjct: 320 NFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSV 379

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM-TKKVSVTDPGTYGIVIRTLGKGKK 385
           E D  + N+L+ GLC    +++ L      + E+M ++K    D  TY  +I    K  +
Sbjct: 380 EPDVVIYNTLIDGLCKVGRQQEGL-----GLMERMRSQKGCAPDTITYNCLIDGFCKAGE 434

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            ++         + G  P  +T N ++  +C  G++  A+                +Y  
Sbjct: 435 IEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTA 494

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           LI     +     A  L+   LK G  P
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSP 522


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 183/390 (46%), Gaps = 6/390 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNS 120
           K   + E +D+F  +       SV DF  LL  +V L    TA+       SS G+  ++
Sbjct: 53  KVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADT 112

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T +I+I C C          V+  MF  G  P V T T L+N LC  G + +A+ ++D 
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDH 172

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M ++    ++ TY  L+ GLC  G    A E L  ++    KP+V  Y+ +MDG CK G 
Sbjct: 173 MEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGL 232

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+ L +E   +GV PN+VT+  L  G C  G   +   LL  M K     D  + + 
Sbjct: 233 VSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNI 292

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++   K GK+  A S+   M+  G   D    NSL+   C+     ++ + +A +VF  
Sbjct: 293 LVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCL-----QNKMNEAMRVFHL 347

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +  + D   +  +I    K K  ++ +  L    +MG +P  +T+  +I   C  G+
Sbjct: 348 MVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGR 407

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              A  L   M+++ ++P+  +  +++  L
Sbjct: 408 PLAAKELFLNMHKYGQVPNLQTCAVILDGL 437



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 201/423 (47%), Gaps = 6/423 (1%)

Query: 28  KLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSD 87
           KLV F  + L T   L L+    +L A      ++ + + + + + D ++K      V  
Sbjct: 126 KLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGN-VAQAVGLVDHMEKMRYPLDVYT 184

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+  L    +   AV++  +       PN   +S ++   C      EA  +   M 
Sbjct: 185 YGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMS 244

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PN+ T+  L+  LC  GR KE   +LD+M ++G + ++QT N L+   C  G+V 
Sbjct: 245 GKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVM 304

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  ++  +   G  PDV+TY +++  +C   + NEAM + +  + RG  P++V F +L 
Sbjct: 305 QAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLI 364

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G+CK+    K + LL+ M K   +PD ++++TL+ G  + G+   A  +F  M ++G  
Sbjct: 365 HGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQV 424

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            + +    +L GLC     + +LL +A  + E M K     +   Y I++  +    K +
Sbjct: 425 PNLQTCAVILDGLC-----KGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLN 479

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            A          G      T+  +I+ LC +G +DKA  LL  M E+  +P   +Y++ +
Sbjct: 480 AAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFV 539

Query: 448 TKL 450
             L
Sbjct: 540 QGL 542



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 176/373 (47%), Gaps = 6/373 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVTTFTI 160
           + A+  F   +S    P+   F++++        +  A  ++  +F + G   +  T  I
Sbjct: 58  DEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITLNI 117

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           ++N LC+   +     VL  M ++G +P + T   L+ GLC  G V +A  ++ +++   
Sbjct: 118 VINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMR 177

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
              DVYTY  +++G CK G +  A+E L +  ER   PNVV ++T+ +G CK+G   + +
Sbjct: 178 YPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEAL 237

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            L   M  +   P+ ++Y+ L+ GL  +G+ +   S+  EM++ G  +D + +N L+   
Sbjct: 238 NLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAF 297

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C    +E  +++ A  V   M       D  TY  +I       K +EA+   H  +  G
Sbjct: 298 C----KEGKVMQ-AKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRG 352

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
            +P  + F ++I   C +  I+K + LL  M +   +P   ++  LI    Q  +   A 
Sbjct: 353 CLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAK 412

Query: 461 ALYGAALKQGVIP 473
            L+    K G +P
Sbjct: 413 ELFLNMHKYGQVP 425



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 168/328 (51%), Gaps = 5/328 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+   SE S  G+ PN  T++ +I+  CN   + E   ++D M   G   ++ T  ILV+
Sbjct: 236 ALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVD 295

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           + CK G++ +A  V+  M   G  P++ TYN L+   C   ++ EA  +   + + G  P
Sbjct: 296 AFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLP 355

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D+  +T+++ G+CK    N+ M LL E  + G  P+VVT+ TL  G+C+ G P+    L 
Sbjct: 356 DIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELF 415

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M K   +P+  + + +L+GL K   +  AVS+ + M +   +++  + + LL G+C  
Sbjct: 416 LNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMC-- 473

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                  L  A+++F  +  K    +  TY I+I+ L K    D+A   L +  E G +P
Sbjct: 474 ---SAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLP 530

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLM 431
              T+N  +Q L  + +I +++  L +M
Sbjct: 531 DNCTYNVFVQGLLTKKEIARSIKYLTIM 558



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 123/250 (49%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V  +N L+    + N+   A++ F    S G  P+   F+ +I  +C   +  + 
Sbjct: 317 GEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKV 376

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             +++ M   G+ P+V T+T L+   C++GR   A E+   M + G  PN+QT   +L G
Sbjct: 377 MHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDG 436

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC    + EA  +   ++   L  ++  Y+ ++DG C  G+ N A EL +    +G+  N
Sbjct: 437 LCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQIN 496

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           V T+  +  G CK+G+  K   LL  M++  CLPD  +Y+  + GLL   +I  ++    
Sbjct: 497 VYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLT 556

Query: 320 EMVRFGFEVD 329
            M   GF VD
Sbjct: 557 IMRDKGFSVD 566



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 109/240 (45%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + +F  +   G    +  F  L+            +    E +  G  P+  T++ 
Sbjct: 338 MNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTT 397

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C       A+++   M   G  PN+ T  ++++ LCK   L EA+ + + M +  
Sbjct: 398 LIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSN 457

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              NI  Y+ LL G+C  G++  A+E+  ++   GL+ +VYTYT ++ G CK G  ++A 
Sbjct: 458 LDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAE 517

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +LL    E G  P+  T+N    G   +    + +  L +M+ +    D  +    +N L
Sbjct: 518 DLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYL 577



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 94/207 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + + + + K G    V  +  L+           A + F     YG  PN  
Sbjct: 369 KDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQ 428

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T ++++   C  N   EA  + + M  +    N+  ++IL++ +C +G+L  A E+   +
Sbjct: 429 TCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSL 488

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + N+ TY  ++KGLC  G +++A ++L+N++ +G  PD  TY   + G       
Sbjct: 489 PGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEI 548

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFN 268
             +++ L    ++G + +  T     N
Sbjct: 549 ARSIKYLTIMRDKGFSVDAATTEITIN 575


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 181/385 (47%), Gaps = 31/385 (8%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F S+   G   +   FN L+ A       + A+  F+E    G+ P+  T+S +I  +
Sbjct: 425 NLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAF 484

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC-KPN 189
           C      +A +    M   G  PN   +  L++  C  G L +A E++ +M   G  +PN
Sbjct: 485 CRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPN 544

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           I  ++ ++  LC  GRV +A+++   V + G +P + T+ +++DG+C VG+  +A  +L+
Sbjct: 545 IVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 604

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             +  G+ P+VVT+NTL +GYCK G    G+ L + M  +   P  ++YS +L+GL   G
Sbjct: 605 AMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAG 664

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL------------------ 351
           +   A  +F EM+  G  VD      LL+GLC     ++ +                   
Sbjct: 665 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 724

Query: 352 ------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
                       E+A  +F  ++    V +  TYG++I  L K    +EA        + 
Sbjct: 725 TVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKS 784

Query: 400 GHIPRTITFNNVIQALCGEGKIDKA 424
           G  P +   N++I+ L  +G I KA
Sbjct: 785 GCAPSSRLLNDIIRMLLQKGDIVKA 809



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 192/409 (46%), Gaps = 6/409 (1%)

Query: 67  KERIDIFDSIKKDGTNWS--VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           +E +D+   + K+G   S  V  FN ++       E   A    +E    G+ P+  T++
Sbjct: 244 QEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYN 303

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            ++   C      +A  V+  M D G  P+  T+T +++    SG  KE+ ++  +M   
Sbjct: 304 SIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSK 363

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  P I T+N  +  LC  GR ++A E+   +   G  PD+ +Y+ ++ G+   GR  + 
Sbjct: 364 GLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADM 423

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L +   ++G+  N   FN L + + K G   + + +   M+ +   PD ++YSTL++ 
Sbjct: 424 NNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISA 483

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             + G++  A+  F +M+  G E +  + +SL+ G CM      DL++    V E M+K 
Sbjct: 484 FCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHG----DLVKAKELVSEMMSKG 539

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +   +   +  +I +L    +  +A    +  I +G  P  +TFN++I   C  GK++KA
Sbjct: 540 IPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKA 599

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +L  M      P   +Y+ L++   +  K  D   L+   L + V P
Sbjct: 600 FGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKP 648



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 189/394 (47%), Gaps = 12/394 (3%)

Query: 90  DLLMALVMLNEQETAVKF------FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           DL+   ++L+   T  +F      F   +  G+  N   F+I+I  +  +    EA  V 
Sbjct: 403 DLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVF 462

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G  P+V T++ L+++ C+ GRL +A+E   QM  IG +PN   Y+ L+ G C  
Sbjct: 463 TEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMH 522

Query: 204 GRVEEAYEMLMNVKNDGL-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           G + +A E++  + + G+ +P++  +++++   C  GR  +A ++ N  I  G  P +VT
Sbjct: 523 GDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVT 582

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           FN+L +GYC  G   K  G+L  M      PD ++Y+TL++G  K GKI   + +F+EM+
Sbjct: 583 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREML 642

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
               +      + +L GL             A ++F +M    +  D  TY I+++ L +
Sbjct: 643 HKKVKPTTVTYSIVLDGLFHAGRTSA-----AKKMFHEMIDSGTAVDIDTYKILLKGLCR 697

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
              TDEA+   H    M         N VI AL    + ++A  L   +     +P+ ++
Sbjct: 698 NDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVST 757

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           Y ++I  L +     +A  ++ +  K G  P  +
Sbjct: 758 YGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSR 791



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 192/438 (43%), Gaps = 41/438 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  ++ + + + G    V  +N ++ AL      + A     +    G+ P+  
Sbjct: 276 KQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGL 335

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  Y     + E+ K+   M   G  P + TF   ++SLCK GR K+A E+   M
Sbjct: 336 TYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYM 395

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGR-----------------------------------V 206
              G  P++ +Y+ LL G    GR                                   +
Sbjct: 396 TTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMM 455

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA  +   ++  G++PDV TY+ ++  FC++GR  +AME  ++ I  G+ PN V +++L
Sbjct: 456 DEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSL 515

Query: 267 FNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
            +G+C  G  +K   L+ ++M K    P+ + +S++++ L   G++  A  +F  ++  G
Sbjct: 516 IHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIG 575

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   NSL+ G C+    EK     A+ V + M       D  TY  ++    K  K
Sbjct: 576 DRPTIVTFNSLIDGYCLVGKMEK-----AFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGK 630

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+ LI     +     P T+T++ V+  L   G+   A  +   M +        +Y +
Sbjct: 631 IDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKI 690

Query: 446 LITKLDQLEKSYDACALY 463
           L+  L + + + +A  L+
Sbjct: 691 LLKGLCRNDLTDEAITLF 708



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 193/423 (45%), Gaps = 32/423 (7%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVML-------NEQETAVKFFS----EASSYGLAPNS 120
           +FD + + GT       N  L AL          N     +  F+    E +   +AP S
Sbjct: 96  LFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRICREEAGPRVAPLS 155

Query: 121 -WTFSIMIRCYCNKNDFFEARK--VIDCMFDNGYHPNVTTFTILVNS----LCKSGRLKE 173
             T+ I++ C C       AR+  +    F       + T TI  N+    LC + R  E
Sbjct: 156 VHTYGILMDCCC------RARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDE 209

Query: 174 ALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK--PDVYTYTA 230
           A++VL  +M  +GC PN  +YN ++K LC   R +EA +M+  +  +G +  PDV ++  
Sbjct: 210 AVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNT 269

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           V+ GF K G  ++A  L+NE +++GV P+VVT+N++ +  CK     K   +L+ M  + 
Sbjct: 270 VIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKG 329

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             PD ++Y+ +++G    G  + +  +F++M   G        NS +  LC         
Sbjct: 330 VEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRS---- 385

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
            +DA ++F+ MT K  + D  +Y I++       +  +     H   + G +     FN 
Sbjct: 386 -KDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNI 444

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I A    G +D+A+L+   M      P   +Y  LI+   ++ +  DA   +   +  G
Sbjct: 445 LISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIG 504

Query: 471 VIP 473
           + P
Sbjct: 505 LEP 507



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 145/326 (44%), Gaps = 40/326 (12%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA-PNSWTFS 124
           L + ++ F  +   G   +   ++ L+    M  +   A +  SE  S G+  PN   FS
Sbjct: 490 LADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFS 549

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +I   CN+    +A  V + +   G  P + TF  L++  C  G++++A  VLD M  +
Sbjct: 550 SIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSV 609

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G +P++ TYN L+ G C  G++++   +   + +  +KP   TY+ V+DG    GR++ A
Sbjct: 610 GIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAA 669

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC------------- 291
            ++ +E I+ G   ++ T+  L  G C+     + + L   +   +C             
Sbjct: 670 KKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINA 729

Query: 292 ----------------------LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
                                 +P+  +Y  +++ LLK G +  A ++F  M + G    
Sbjct: 730 LYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPS 789

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAY 355
            R++N ++R L  K     D+++  Y
Sbjct: 790 SRLLNDIIRMLLQKG----DIVKAGY 811



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 37/197 (18%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF-------FEAR 140
           ++ +L  L        A K F E    G A +  T+ I+++  C +ND        F   
Sbjct: 653 YSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC-RNDLTDEAITLFHKL 711

Query: 141 KVIDCMFD-----------------------------NGYHPNVTTFTILVNSLCKSGRL 171
             +DC FD                             +G  PNV+T+ +++++L K G +
Sbjct: 712 GAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSV 771

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
           +EA  +   M + GC P+ +  N +++ L   G + +A   +  V    +  +  T + +
Sbjct: 772 EEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLL 831

Query: 232 MDGFCKVGRSNEAMELL 248
           M  F   G+  E ++ L
Sbjct: 832 MSLFSSKGKHREQIKFL 848


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 214/476 (44%), Gaps = 41/476 (8%)

Query: 33  AAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLL 92
           A ASLS     +++     L  + +  + K       +D+F  +   G   S +  N LL
Sbjct: 163 AMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILL 222

Query: 93  MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
            +LV  NE +   + F +    G++P+ + F+  I  +C      EA K+   M + G  
Sbjct: 223 TSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA 281

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           PNV TF  +++ L   GR  EA    ++M   G +P + TY+ L+KGL    R+ +AY +
Sbjct: 282 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 341

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G  P+V  Y  ++D F + G  N+A+E+ +  + +G++    T+NTL  GYCK
Sbjct: 342 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 401

Query: 273 EGTPMKGVGLLKLMKK-----------------------------------RNCLPDKIS 297
            G       LLK M                                     RN  P    
Sbjct: 402 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 461

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
            +TL++GL K GK   A+ ++ + +  GF VD R  N+LL GLC     E   L++A+++
Sbjct: 462 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC-----EAGKLDEAFRI 516

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            +++  +  V D  +Y  +I      KK DEA + L   ++ G  P   T++ +I  L  
Sbjct: 517 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 576

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             K+++A+        +  +P   +Y ++I    + E++ +    +   + + V P
Sbjct: 577 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 632



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 132/249 (53%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E     D + K G       ++ L+  L  +N+ E A++F+ +    G+ P+ +T+S+
Sbjct: 545 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 604

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI   C      E ++  D M      PN   +  L+ + C+SGRL  ALE+ + M   G
Sbjct: 605 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 664

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TY  L+KG+  + RVEEA  +   ++ +GL+P+V+ YTA++DG+ K+G+  +  
Sbjct: 665 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 724

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL E   + V PN +T+  +  GY ++G   +   LL  M+++  +PD I+Y   + G 
Sbjct: 725 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 784

Query: 306 LKWGKIRPA 314
           LK G +  A
Sbjct: 785 LKQGGVLEA 793



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 199/447 (44%), Gaps = 40/447 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E + +F  +++ G   +V  FN ++  L M    + A  F  +    G+ P   
Sbjct: 261 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 320

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+++         +A  V+  M   G+ PNV  +  L++S  ++G L +A+E+ D M
Sbjct: 321 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 380

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV---------- 231
              G      TYN L+KG C  G+ + A  +L  + + G   +  ++T+V          
Sbjct: 381 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 440

Query: 232 -------------------------MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                                    + G CK G+ ++A+EL  + + +G   +  T N L
Sbjct: 441 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 500

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G C+ G   +   + K +  R C+ D++SY+TL++G     K+  A     EMV+ G 
Sbjct: 501 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 560

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + D    + L+ GL        + +E+A Q ++   +   + D  TY ++I    K ++T
Sbjct: 561 KPDNYTYSILICGLF-----NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 615

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           +E        +     P T+ +N++I+A C  G++  AL L   M      P+  +Y  L
Sbjct: 616 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 675

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I  +  + +  +A  L+     +G+ P
Sbjct: 676 IKGMSIISRVEEAKLLFEEMRMEGLEP 702



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 133/278 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L E   I   I   G       +N L+       + + A  F  E    GL P+++
Sbjct: 506 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 565

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+I    N N   EA +  D    NG  P+V T++++++  CK+ R +E  E  D+M
Sbjct: 566 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 625

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                +PN   YN L++  C  GR+  A E+  ++K+ G+ P+  TYT+++ G   + R 
Sbjct: 626 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 685

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L  E    G+ PNV  +  L +GY K G  +K   LL+ M  +N  P+KI+Y+ +
Sbjct: 686 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 745

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + G  + G +  A  +  EM   G   D       + G
Sbjct: 746 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 783



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 158/335 (47%), Gaps = 5/335 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  L    +   A++ + +  + G   ++ T + ++   C      EA ++   +   G
Sbjct: 465 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 524

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +  ++  L++  C   +L EA   LD+M + G KP+  TY+ L+ GL  + +VEEA 
Sbjct: 525 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 584

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           +   + K +G+ PDVYTY+ ++DG CK  R+ E  E  +E + + V PN V +N L   Y
Sbjct: 585 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 644

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+ G     + L + MK +   P+  +Y++L+ G+    ++  A  +F+EM   G E + 
Sbjct: 645 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 704

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +L+ G     + +   +     +  +M  K    +  TY ++I    +     EA 
Sbjct: 705 FHYTALIDG-----YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 759

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
             L+   E G +P +IT+   I     +G + +A 
Sbjct: 760 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 794



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 178/413 (43%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+A  L + I+I D +   G + + S +N L+       + + A +   E  S G   N 
Sbjct: 365 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 424

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +F+ +I   C+   F  A + +  M      P     T L++ LCK G+  +ALE+  Q
Sbjct: 425 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 484

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
               G   + +T N LL GLC  G+++EA+ +   +   G   D  +Y  ++ G C   +
Sbjct: 485 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 544

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA   L+E ++RG+ P+  T++ L  G        + +      K+   LPD  +YS 
Sbjct: 545 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 604

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++G  K  +       F EM+    + +  + N L+R  C         L  A ++ E 
Sbjct: 605 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR-----LSMALELRED 659

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  K    +  TY  +I+ +    + +EA +        G  P    +  +I      G+
Sbjct: 660 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 719

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + K   LL  M+     P++ +Y ++I    +     +A  L     ++G++P
Sbjct: 720 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 772



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 158/354 (44%), Gaps = 9/354 (2%)

Query: 125 IMIRCYCN---KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++I  YC    ++  + A  V   + + G  P+ TT  IL+ SL ++   ++  E  D +
Sbjct: 182 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 241

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P++  +   +   C  G+VEEA ++   ++  G+ P+V T+  V+DG    GR 
Sbjct: 242 CK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 300

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA     + +ERG+ P ++T++ L  G  +         +LK M K+   P+ I Y+ L
Sbjct: 301 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 360

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++  ++ G +  A+ I   MV  G  +     N+L++G C     +     +A ++ ++M
Sbjct: 361 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD-----NAERLLKEM 415

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  + G++  VI  L      D AL  +   +     P       +I  LC  GK 
Sbjct: 416 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 475

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            KAL L F       +    + + L+  L +  K  +A  +    L +G +  R
Sbjct: 476 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 529



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 84/185 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA   +E  + FD +       +   +N L+ A         A++   +    G++PNS 
Sbjct: 611 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 670

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+     +   EA+ + + M   G  PNV  +T L++   K G++ +   +L +M
Sbjct: 671 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 730

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 PN  TY  ++ G    G V EA  +L  ++  G+ PD  TY   + G+ K G  
Sbjct: 731 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 790

Query: 242 NEAME 246
            EA +
Sbjct: 791 LEAFK 795



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 10/177 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           ++  L   +++ + +K  G + + + +  L+  + +++  E A   F E    GL PN +
Sbjct: 646 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 705

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  Y       +   ++  M     HPN  T+T+++    + G + EA  +L++M
Sbjct: 706 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 765

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
              G  P+  TY   + G    G V EA++            D   Y A+++G+ K+
Sbjct: 766 REKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAIIEGWNKL 812


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 214/476 (44%), Gaps = 41/476 (8%)

Query: 33  AAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLL 92
           A ASLS     +++     L  + +  + K       +D+F  +   G   S +  N LL
Sbjct: 187 AMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILL 246

Query: 93  MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
            +LV  NE +   + F +    G++P+ + F+  I  +C      EA K+   M + G  
Sbjct: 247 TSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA 305

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           PNV TF  +++ L   GR  EA    ++M   G +P + TY+ L+KGL    R+ +AY +
Sbjct: 306 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 365

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G  P+V  Y  ++D F + G  N+A+E+ +  + +G++    T+NTL  GYCK
Sbjct: 366 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 425

Query: 273 EGTPMKGVGLLKLMKK-----------------------------------RNCLPDKIS 297
            G       LLK M                                     RN  P    
Sbjct: 426 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 485

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
            +TL++GL K GK   A+ ++ + +  GF VD R  N+LL GLC     E   L++A+++
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC-----EAGKLDEAFRI 540

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            +++  +  V D  +Y  +I      KK DEA + L   ++ G  P   T++ +I  L  
Sbjct: 541 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 600

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             K+++A+        +  +P   +Y ++I    + E++ +    +   + + V P
Sbjct: 601 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 132/249 (53%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E     D + K G       ++ L+  L  +N+ E A++F+ +    G+ P+ +T+S+
Sbjct: 569 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 628

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI   C      E ++  D M      PN   +  L+ + C+SGRL  ALE+ + M   G
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 688

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TY  L+KG+  + RVEEA  +   ++ +GL+P+V+ YTA++DG+ K+G+  +  
Sbjct: 689 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 748

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL E   + V PN +T+  +  GY ++G   +   LL  M+++  +PD I+Y   + G 
Sbjct: 749 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 808

Query: 306 LKWGKIRPA 314
           LK G +  A
Sbjct: 809 LKQGGVLEA 817



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 199/447 (44%), Gaps = 40/447 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E + +F  +++ G   +V  FN ++  L M    + A  F  +    G+ P   
Sbjct: 285 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 344

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+++         +A  V+  M   G+ PNV  +  L++S  ++G L +A+E+ D M
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV---------- 231
              G      TYN L+KG C  G+ + A  +L  + + G   +  ++T+V          
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464

Query: 232 -------------------------MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                                    + G CK G+ ++A+EL  + + +G   +  T N L
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G C+ G   +   + K +  R C+ D++SY+TL++G     K+  A     EMV+ G 
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + D    + L+ GL        + +E+A Q ++   +   + D  TY ++I    K ++T
Sbjct: 585 KPDNYTYSILICGLF-----NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 639

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           +E        +     P T+ +N++I+A C  G++  AL L   M      P+  +Y  L
Sbjct: 640 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 699

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I  +  + +  +A  L+     +G+ P
Sbjct: 700 IKGMSIISRVEEAKLLFEEMRMEGLEP 726



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 133/278 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L E   I   I   G       +N L+       + + A  F  E    GL P+++
Sbjct: 530 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 589

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+I    N N   EA +  D    NG  P+V T++++++  CK+ R +E  E  D+M
Sbjct: 590 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 649

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                +PN   YN L++  C  GR+  A E+  ++K+ G+ P+  TYT+++ G   + R 
Sbjct: 650 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 709

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L  E    G+ PNV  +  L +GY K G  +K   LL+ M  +N  P+KI+Y+ +
Sbjct: 710 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 769

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + G  + G +  A  +  EM   G   D       + G
Sbjct: 770 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 807



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 158/335 (47%), Gaps = 5/335 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  L    +   A++ + +  + G   ++ T + ++   C      EA ++   +   G
Sbjct: 489 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 548

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +  ++  L++  C   +L EA   LD+M + G KP+  TY+ L+ GL  + +VEEA 
Sbjct: 549 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 608

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           +   + K +G+ PDVYTY+ ++DG CK  R+ E  E  +E + + V PN V +N L   Y
Sbjct: 609 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 668

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+ G     + L + MK +   P+  +Y++L+ G+    ++  A  +F+EM   G E + 
Sbjct: 669 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 728

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +L+ G     + +   +     +  +M  K    +  TY ++I    +     EA 
Sbjct: 729 FHYTALIDG-----YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 783

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
             L+   E G +P +IT+   I     +G + +A 
Sbjct: 784 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 818



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 178/413 (43%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+A  L + I+I D +   G + + S +N L+       + + A +   E  S G   N 
Sbjct: 389 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 448

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +F+ +I   C+   F  A + +  M      P     T L++ LCK G+  +ALE+  Q
Sbjct: 449 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 508

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
               G   + +T N LL GLC  G+++EA+ +   +   G   D  +Y  ++ G C   +
Sbjct: 509 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 568

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA   L+E ++RG+ P+  T++ L  G        + +      K+   LPD  +YS 
Sbjct: 569 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 628

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++G  K  +       F EM+    + +  + N L+R  C         L  A ++ E 
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR-----LSMALELRED 683

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  K    +  TY  +I+ +    + +EA +        G  P    +  +I      G+
Sbjct: 684 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 743

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + K   LL  M+     P++ +Y ++I    +     +A  L     ++G++P
Sbjct: 744 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 796



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 158/354 (44%), Gaps = 9/354 (2%)

Query: 125 IMIRCYCN---KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++I  YC    ++  + A  V   + + G  P+ TT  IL+ SL ++   ++  E  D +
Sbjct: 206 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 265

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P++  +   +   C  G+VEEA ++   ++  G+ P+V T+  V+DG    GR 
Sbjct: 266 CK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 324

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA     + +ERG+ P ++T++ L  G  +         +LK M K+   P+ I Y+ L
Sbjct: 325 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++  ++ G +  A+ I   MV  G  +     N+L++G C     +     +A ++ ++M
Sbjct: 385 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD-----NAERLLKEM 439

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  + G++  VI  L      D AL  +   +     P       +I  LC  GK 
Sbjct: 440 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 499

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            KAL L F       +    + + L+  L +  K  +A  +    L +G +  R
Sbjct: 500 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 553



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 84/185 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA   +E  + FD +       +   +N L+ A         A++   +    G++PNS 
Sbjct: 635 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+     +   EA+ + + M   G  PNV  +T L++   K G++ +   +L +M
Sbjct: 695 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 754

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 PN  TY  ++ G    G V EA  +L  ++  G+ PD  TY   + G+ K G  
Sbjct: 755 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 814

Query: 242 NEAME 246
            EA +
Sbjct: 815 LEAFK 819



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 10/177 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           ++  L   +++ + +K  G + + + +  L+  + +++  E A   F E    GL PN +
Sbjct: 670 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 729

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  Y       +   ++  M     HPN  T+T+++    + G + EA  +L++M
Sbjct: 730 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 789

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
              G  P+  TY   + G    G V EA++            D   Y A+++G+ K+
Sbjct: 790 REKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAIIEGWNKL 836


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 187/397 (47%), Gaps = 6/397 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A    E   + +  K  G+  SV  +N +L  L      E A++ F E     + PN  T
Sbjct: 103 AGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPT 161

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I   C +     A ++ D M   G  PNV T  I+++ LCK+ +L+EA  + + M 
Sbjct: 162 YNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMD 221

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              C PN  T++ L+ GL   GRV++AY +   + + G  P    YT+++  F K GR  
Sbjct: 222 DKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKE 281

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +  ++  E +  G +P++   NT  +   K G   KG  L + +     +PD  SYS L+
Sbjct: 282 DGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILI 341

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +GL+K G       +F  M   G  +D    N+++ G C      K     AYQ+ E+M 
Sbjct: 342 HGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNK-----AYQLLEEMK 396

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            K       TYG VI  L K  + DEA +    A   G     + ++++I      G+ID
Sbjct: 397 VKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRID 456

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           +A L++  + +    P+  +++ L+  L + E+  +A
Sbjct: 457 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 493



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 197/421 (46%), Gaps = 16/421 (3%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLL--MALVML--------NEQETAVKFFSE 110
           +K+  L+E  DI  +++K     + S +  L+  + L++L        N  + AV+ F +
Sbjct: 21  VKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQ 80

Query: 111 ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR 170
                  P ++ ++ MI  Y +   F EA  +++     G  P+V  +  ++  L K  R
Sbjct: 81  LEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRR 140

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           ++EAL + ++M R    PN+ TYN L+  LC  G++  A E+  +++  GL P+V T   
Sbjct: 141 VEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNI 199

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++D  CK  +  EA  +     ++  TPN VTF++L +G  K G       L + M    
Sbjct: 200 MIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG 259

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
            +P  I Y++L+    K G+      I+KEMV  G   D  ++N+ +  +  K+ E    
Sbjct: 260 HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCV-FKAGET--- 315

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
            E    +F ++     + D  +Y I+I  L K    +E     +   E G +  T  +N 
Sbjct: 316 -EKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNA 374

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           VI   C  GK++KA  LL  M      P+  +Y  +I  L ++++  +A  L+  A   G
Sbjct: 375 VIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 434

Query: 471 V 471
           +
Sbjct: 435 I 435



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 163/318 (51%), Gaps = 5/318 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I+  +   G +  ++  N  +  +    E E     F E +++G  P++ ++SI+I    
Sbjct: 286 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 345

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 E  ++   M + G   +   +  +++  CKSG++ +A ++L++M   G  P + 
Sbjct: 346 KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVV 405

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  ++ GL  + R++EAY +    K++G+K +V  Y++++DGF KVGR +EA  ++ E 
Sbjct: 406 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL 465

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+TPNV T+N L +   K     + +   + MK   C P++I+YS L+NGL +  K 
Sbjct: 466 MQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKF 525

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A   ++EM + G + +     +++ GL     +  ++LE A  +F +      + D  
Sbjct: 526 NKAFVFWQEMQKLGLKPNTITYTTMISGLA----KAGNILE-ASGLFSRFKANGGIPDSA 580

Query: 372 TYGIVIRTLGKGKKTDEA 389
           +Y  +I  L    K  +A
Sbjct: 581 SYNAMIEGLSSANKAMDA 598



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 191/410 (46%), Gaps = 9/410 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   ++I D +++ G   +V   N ++  L    + E A   F         PN+ TFS 
Sbjct: 175 LNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSS 234

Query: 126 MIRCY--CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           +I     C + D  +A  + + M D G+ P    +T L+ S  K GR ++  ++  +M  
Sbjct: 235 LIDGLGKCGRVD--DAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVH 292

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            GC P++   N  +  +   G  E+   +   +   G  PD  +Y+ ++ G  K G +NE
Sbjct: 293 TGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANE 352

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
             EL     E+G   +   +N + +G+CK G   K   LL+ MK +   P  ++Y ++++
Sbjct: 353 TYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVID 412

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL K  ++  A  +F+E    G +++  + +SL+ G     + +   +++AY + E++ +
Sbjct: 413 GLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG-----FGKVGRIDEAYLIMEELMQ 467

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           K    +  T+  ++  L K ++ +EALI      ++   P  IT++ +I  LC   K +K
Sbjct: 468 KGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNK 527

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A +    M +    P+  +Y  +I+ L +     +A  L+      G IP
Sbjct: 528 AFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIP 577



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 118/514 (22%), Positives = 216/514 (42%), Gaps = 55/514 (10%)

Query: 11  IFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKEN-------PRSLQAQRFVDRI-K 62
           IF    R     +P +N L+           +L+++++       P  L     +DR+ K
Sbjct: 147 IFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCK 206

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L+E   IF+ +       +   F+ L+  L      + A   + +    G  P +  
Sbjct: 207 AQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV 266

Query: 123 FSIMIRCY--CNKN-----------------DFFEARKVIDCMFD--------------- 148
           ++ +IR +  C +                  D       +DC+F                
Sbjct: 267 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 326

Query: 149 -NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G+ P+  +++IL++ L K+G   E  E+   M   GC  +   YN ++ G C  G+V 
Sbjct: 327 AHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 386

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +AY++L  +K  G  P V TY +V+DG  K+ R +EA  L  EA   G+  NVV +++L 
Sbjct: 387 KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 446

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G+ K G   +   +++ + ++   P+  +++ LL+ L+K  +I  A+  F+ M      
Sbjct: 447 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCP 506

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            ++   + L+ GLC      K     A+  +++M K     +  TY  +I  L K     
Sbjct: 507 PNQITYSILINGLCRVRKFNK-----AFVFWQEMQKLGLKPNTITYTTMISGLAKAGNIL 561

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS-RTSYDML 446
           EA          G IP + ++N +I+ L    K   A    + ++E  ++          
Sbjct: 562 EASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDA----YALFEETRLKGCNIHTKTC 617

Query: 447 ITKLDQLEKS--YDACALYGAALKQGVIPQRKPQ 478
           +  LD L K+   +  A+ GA LK+    Q   +
Sbjct: 618 VVLLDALHKAECLEQAAIVGAVLKETAKSQHASR 651



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 137/325 (42%), Gaps = 31/325 (9%)

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           +G+ P+      LV +  KS +L+EA +++  M +   +P    Y  L      +G+V  
Sbjct: 4   SGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTIL------IGKV-- 55

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
                      GL   +  +  V+   CK  R +EA+EL  +  +    P    +NT+  
Sbjct: 56  -----------GL---MLLFPWVL---CKANRLDEAVELFEQLEQNRKVPCAYAYNTMIM 98

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           GY   G   +  GLL+  K +  +P  I+Y+ +L  L K  ++  A+ IF+EM R     
Sbjct: 99  GYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP- 157

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +    N L+  LC +       L  A ++ + M +     +  T  I+I  L K +K +E
Sbjct: 158 NVPTYNILIDMLCREGK-----LNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEE 212

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A        +    P  +TF+++I  L   G++D A  L   M +   +P    Y  LI 
Sbjct: 213 ACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIR 272

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
              +  +  D   +Y   +  G  P
Sbjct: 273 SFFKCGRKEDGHKIYKEMVHTGCSP 297


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 189/397 (47%), Gaps = 17/397 (4%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D ++  G    V  +N  L  LV       A +   E +  G+ PNS+T++I++   C
Sbjct: 303 LVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLC 362

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +   F+AR+V + +      P+V T+T L+++ C  G +  A  +LD+M + GC PN  
Sbjct: 363 KEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSF 422

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN LL+ L   GR  EA  +L  +   G   D      ++DG C+  R + AM++++  
Sbjct: 423 TYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGM 482

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            E G        N+  +         +            CLPD+I+YS L++ L K G+ 
Sbjct: 483 WEEGSGALGRLGNSFLSVVSDSSISQR------------CLPDQITYSILISALCKEGRF 530

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A     EM+      D  + ++ + G C      K  L  A +V   M KK       
Sbjct: 531 DEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHG---KTSL--AIKVLRDMEKKGCNPSTR 585

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY ++IR   +  K++E +  +    E G  P  +T+N++I++ C +G ++KA+ LL  M
Sbjct: 586 TYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEM 645

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
            ++  +P+ TS+D+LI    ++     A  ++ AAL+
Sbjct: 646 LQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALR 682



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 185/395 (46%), Gaps = 24/395 (6%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH----PNVTT 157
           E A +        GLAPN  TF+  I   C      +A ++   M ++  H    P+  T
Sbjct: 224 EEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVT 283

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F ++++  C +G + EA  ++D M   G    +++YN  L GL   GRV EA E+L  + 
Sbjct: 284 FDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMA 343

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV-TPNVVTFNTLFNGYCKEGTP 276
           ++G++P+ YTY  ++ G CK G++ +A  + N  I  GV +P+VVT+ +L + YC +G  
Sbjct: 344 HEGIQPNSYTYNIIVSGLCKEGKAFDARRVEN-FIRSGVMSPDVVTYTSLLHAYCSKGNI 402

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                +L  M ++ C P+  +Y+ LL  L + G+   A  + + M   G+ +D    N +
Sbjct: 403 AAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNII 462

Query: 337 LRGLCMKS------------WEE-KDLLEDAYQVFEKMTKKVSVT-----DPGTYGIVIR 378
           + GLC  S            WEE    L      F  +    S++     D  TY I+I 
Sbjct: 463 IDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILIS 522

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L K  + DEA   L   I     P ++ ++  I   C  GK   A+ +L  M +    P
Sbjct: 523 ALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNP 582

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           S  +Y++LI   ++  KS +   L     ++G+ P
Sbjct: 583 STRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISP 617



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 7/271 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+  T+SI+I   C +  F EA+K +  M      P+   +   ++  CK G+   A++V
Sbjct: 512 PDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKV 571

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L  M + GC P+ +TYN L++G     + EE  +++  +K  G+ P+V TY +++  FC+
Sbjct: 572 LRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQ 631

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G  N+AM LL+E ++  + PN+ +F+ L   YCK  T      ++     R C   ++ 
Sbjct: 632 QGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKI-TDFPSAQMVFDAALRTCGQKEVL 690

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y  +   L  +GK   A +I +  +     +       ++ GLC     E   ++ A+ +
Sbjct: 691 YCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLC-----EVGEVDHAHSL 745

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLG-KGKKTD 387
            + +  K  + DP  +  VI  LG +GKK D
Sbjct: 746 LKLLIAKRHLFDPAAFMPVIDALGDRGKKQD 776



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 157/344 (45%), Gaps = 48/344 (13%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P    +  L+ +  +  RL     +   +   G +P++ T N LL+ LC  GR+E A  +
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRV 167

Query: 213 L--MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
              M  +N+      +++  +  G+C+ GRS +A+++L+       + N+V  NT+  G+
Sbjct: 168 FDAMPARNE------FSFGILARGYCRAGRSIDALKVLDGM----PSMNLVVCNTVVAGF 217

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV---RFGF- 326
           CKEG   +   L++ M+ +   P+ ++++  ++ L K G++  A  IF++M    + G  
Sbjct: 218 CKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLP 277

Query: 327 EVDERMMNSLLRGLCMKSW-EEKDLLED-----------------------------AYQ 356
             D+   + +L G C   + +E  +L D                             A +
Sbjct: 278 RPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQE 337

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQAL 415
           +  +M  +    +  TY I++  L K  K  +A   + + I  G + P  +T+ +++ A 
Sbjct: 338 LLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDAR-RVENFIRSGVMSPDVVTYTSLLHAY 396

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           C +G I  A  +L  M +    P+  +Y++L+  L +  ++ +A
Sbjct: 397 CSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEA 440



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 1/185 (0%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +   ++K G N S   +N L+      ++ E  +K  SE    G++PN  T++ +I+ 
Sbjct: 569 IKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKS 628

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C +    +A  ++D M  N   PN+T+F +L+ + CK      A  V D   R  C   
Sbjct: 629 FCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRT-CGQK 687

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
              Y  +   L   G+  EA  +L       +    + Y  ++ G C+VG  + A  LL 
Sbjct: 688 EVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLK 747

Query: 250 EAIER 254
             I +
Sbjct: 748 LLIAK 752



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 5/149 (3%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           +E + +   +K+ G + +V  +N L+ +         A+    E     L PN  +F ++
Sbjct: 601 EEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLL 660

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I+ YC   DF  A+ V D          V  + ++   L   G+  EA  +L+    +  
Sbjct: 661 IKAYCKITDFPSAQMVFDAALRTCGQKEV-LYCLMCTELTTYGKWIEAKNILEMA--LEM 717

Query: 187 KPNIQT--YNCLLKGLCYVGRVEEAYEML 213
           + +IQ+  Y  ++ GLC VG V+ A+ +L
Sbjct: 718 RVSIQSFPYKQIISGLCEVGEVDHAHSLL 746


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 208/473 (43%), Gaps = 43/473 (9%)

Query: 35  ASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLM 93
           A L   E +D+   P  +     +D  ++   +++   I D +   G   ++  +N LL 
Sbjct: 304 AKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLN 363

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
            +    + E A++   E    G+ P+S T+S++I  +C   +   A +++D M      P
Sbjct: 364 GVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAP 423

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
            V T+++++N LC+ G L+    +L +M   G KPN   Y  L+      GRVEE+  +L
Sbjct: 424 TVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 483

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER------------------- 254
             ++  G+ PDV+ Y +++ GFCK  R  EA   L E +ER                   
Sbjct: 484 ERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA 543

Query: 255 ----------------GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
                           GV PNV  +  L  G+CKEG   +   + + +  R  L D  +Y
Sbjct: 544 GEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTY 603

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           S L++GL + GK+  A  IF E+   G   +    NSL+ G C +   +K     A Q+ 
Sbjct: 604 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDK-----ASQLL 658

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE-MGHIPRTITFNNVIQALCG 417
           E+M  K    D  TY I+I  L K  + + A  +L   IE  G  P  +T+  ++   C 
Sbjct: 659 EEMCIKGINPDIVTYNILIDGLCKAGEIERAK-NLFDDIEGRGLTPNCVTYAAMVDGYCK 717

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
                 A  LL  M      P    Y++++    + EK   A  L+   L++G
Sbjct: 718 SKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 770



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 191/398 (47%), Gaps = 41/398 (10%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           E E A ++F+E  S G+ PN   ++ +I  +C + +  EA  V   +       +V T++
Sbjct: 545 EMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYS 604

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           +L++ L ++G++ EA  +  ++   G  PN  TYN L+ G C  G V++A ++L  +   
Sbjct: 605 VLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIK 664

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G+ PD+ TY  ++DG CK G    A  L ++   RG+TPN VT+  + +GYCK   P   
Sbjct: 665 GINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 724

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             LL+ M  R   PD   Y+ +LN   K  K   A+ +F+EM+  GF       N+L+ G
Sbjct: 725 FQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEG 783

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR------TLGKGK--------- 384
            C KS +    L++A  + E+M +K  + +  TY  +I        +G+ K         
Sbjct: 784 YC-KSGK----LQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 838

Query: 385 ------KTDEALIHLHHAI-----------EM---GHIPRTITFNNVIQALCGEGKIDKA 424
                 KT  +L+H +H I           EM   G  P  +T+  +I A C EG + +A
Sbjct: 839 NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 898

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
             L   +       S  +YD LI  L + E+ ++   L
Sbjct: 899 CKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKL 936



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 214/478 (44%), Gaps = 75/478 (15%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E +++F   K      S+   N LL  L+  N+ E   K F    ++ + P+ +T++ 
Sbjct: 161 LVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTN 220

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI  +C   +  +A++V+  M + G  PN+ T+ +++  LC++  L EA+E+   M   G
Sbjct: 221 MISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKG 280

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF---------- 235
             P++ TY+ L+ G C   R  EA  ML+ + + GLKP+  TY A++DGF          
Sbjct: 281 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 340

Query: 236 -------------------------CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
                                    CK G+  +A+E++ E +E+GV P+  T++ L  G+
Sbjct: 341 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 400

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE--- 327
           C+     +   LL  MKKR   P  ++YS ++NGL + G ++   +I +EMV  G +   
Sbjct: 401 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 460

Query: 328 ---------------------VDERM-----------MNSLLRGLCMKSWEEKDLLEDAY 355
                                + ERM            NSL+ G C     +   +E+A 
Sbjct: 461 VVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC-----KAKRMEEAR 515

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
               +M ++    +  TYG  I    K  + + A  + +  +  G +P    +  +I+  
Sbjct: 516 TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGH 575

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           C EG + +A  +   +     +    +Y +LI  L +  K ++A  ++    ++G++P
Sbjct: 576 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLP 633



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 191/414 (46%), Gaps = 6/414 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E   I + +++ G    V  +N L++        E A  +  E     L PN+ 
Sbjct: 472 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 531

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+   I  Y    +   A +  + M   G  PNV  +T L+   CK G + EA  V   +
Sbjct: 532 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 591

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                  ++QTY+ L+ GL   G++ EA+ +   ++  GL P+ +TY +++ G CK G  
Sbjct: 592 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 651

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A +LL E   +G+ P++VT+N L +G CK G   +   L   ++ R   P+ ++Y+ +
Sbjct: 652 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAM 711

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K      A  + +EM+  G   D  + N +L   C    EEK   E A  +F++M
Sbjct: 712 VDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCK---EEK--FEKALDLFQEM 766

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K       ++  +I    K  K  EA   L   IE   IP  +T+ ++I   C  G +
Sbjct: 767 LEK-GFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMM 825

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            +A  L   M E   +P+  +Y  L+     +    +  AL+   + +G+ P +
Sbjct: 826 GEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 879



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 183/386 (47%), Gaps = 5/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+   +   + E A +   E  + G+  N   ++ ++   C      +A +++  M 
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  P+  T+++L+   C+   +  A E+LD+M +    P + TY+ ++ GLC  G ++
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
               +L  +  +GLKP+   YT +M    K GR  E+  +L    E+G+ P+V  +N+L 
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 502

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G+CK     +    L  M +R   P+  +Y   ++G  K G++  A   F EM+  G  
Sbjct: 503 IGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL 562

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +  +  +L+ G C    +E ++ E A+ VF  +  +  + D  TY ++I  L +  K  
Sbjct: 563 PNVGIYTALIEGHC----KEGNVTE-AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMH 617

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA        E G +P   T+N++I   C +G +DKA  LL  M      P   +Y++LI
Sbjct: 618 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 677

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L +  +   A  L+     +G+ P
Sbjct: 678 DGLCKAGEIERAKNLFDDIEGRGLTP 703



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 179/368 (48%), Gaps = 8/368 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   +F  I        V  ++ L+  L    +   A   FSE    GL PN++
Sbjct: 577 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 636

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C + +  +A ++++ M   G +P++ T+ IL++ LCK+G ++ A  + D +
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 696

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN  TY  ++ G C       A+++L  +   G+ PD + Y  +++  CK  + 
Sbjct: 697 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 756

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A++L  E +E+G   + V+FNTL  GYCK G   +   LL+ M ++  +P+ ++Y++L
Sbjct: 757 EKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 815

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++   K G +  A  ++ EM         +   SLL G     +     + +   +FE+M
Sbjct: 816 IDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHG-----YHNIGNMSEVSALFEEM 870

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGK 420
             K    D  TY ++I    +     EA   L   I +  +P ++  ++ +IQALC + +
Sbjct: 871 VAKGIEPDKMTYYVMIDAYCREGNVMEA-CKLKDEILVKGMPMSVAAYDALIQALCKKEE 929

Query: 421 IDKALLLL 428
             + L LL
Sbjct: 930 FFEVLKLL 937



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 167/396 (42%), Gaps = 58/396 (14%)

Query: 131 CNKNDFFEARKVIDCMFDNG------------------YHPNVTTFTILVNSLCKSGRLK 172
           CN N +  A  +I C+  N                     PN   F +L++S  K G L 
Sbjct: 103 CNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLV 162

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           EA+ V         +P++ + N LL  L    +VE  +++   +    + PDVYTYT ++
Sbjct: 163 EAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMI 222

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
              CKVG   +A  +L E  E+G +PN+VT+N +  G C+     + + L + M  +  +
Sbjct: 223 SAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLV 282

Query: 293 PD-----------------------------------KISYSTLLNGLLKWGKIRPAVSI 317
           PD                                    I+Y+ L++G ++ G I  A  I
Sbjct: 283 PDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRI 342

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             EMV  G E +  + N+LL G+C     +   +E A ++ ++M +K    D  TY ++I
Sbjct: 343 KDEMVACGIEANLIIWNTLLNGVC-----KAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 397

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               +G+    A   L    +    P  +T++ +I  LC  G +     +L  M  +   
Sbjct: 398 EGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK 457

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P+   Y  L+T   +  +  ++  +     +QG++P
Sbjct: 458 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 493



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 142/331 (42%), Gaps = 43/331 (12%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP  +     +D + KA  ++   ++FD I+  G   +   +  ++           A +
Sbjct: 667 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 726

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
              E    G+ P+++ +++++   C +  F +A  +   M + G+   V+ F  L+   C
Sbjct: 727 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYC 785

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KSG+L+EA  +L++M      PN  TY  L+   C  G + EA  + + ++   + P   
Sbjct: 786 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAK 845

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL---- 282
           TYT+++ G+  +G  +E   L  E + +G+ P+ +T+  + + YC+EG  M+   L    
Sbjct: 846 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 905

Query: 283 ----------------------------LKLMKK------RNCLPDKISYSTLLNGLLKW 308
                                       LKL+ +      R  LP   + S +  G    
Sbjct: 906 LVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLP---TCSVIARGFQIA 962

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           G +  A  + + MV+FG+  +   +  L+ G
Sbjct: 963 GNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 36/256 (14%)

Query: 102  ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
            E A+  F E    G A ++ +F+ +I  YC      EA  +++ M +  + PN  T+T L
Sbjct: 757  EKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 815

Query: 162  VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
            ++  CK+G + EA  +  +M      P  +TY  LL G   +G + E   +   +   G+
Sbjct: 816  IDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGI 875

Query: 222  KPDVYTYTAVMDGFCKVGRSNEA-----------------------------------ME 246
            +PD  TY  ++D +C+ G   EA                                   ++
Sbjct: 876  EPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLK 935

Query: 247  LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
            LLNE  E G    + T + +  G+   G   +   +L+ M K   + +  S   L++G  
Sbjct: 936  LLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQ 995

Query: 307  KWGKIRPAVSIFKEMV 322
                   + ++ K+M 
Sbjct: 996  NGANSEDSDNLLKQMA 1011



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 6/201 (2%)

Query: 275 TPMKGVG-LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           +P+  +G ++K  +  N  P+ + +  L++   K G +  AV++F     F F       
Sbjct: 124 SPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSC 183

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           NSLL  L      + + +E  ++VF+ M     + D  TY  +I    K     +A   L
Sbjct: 184 NSLLGDLL-----KGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVL 238

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
               E G  P  +T+N +I  LC    +D+A+ L   M +   +P   +YD+LI      
Sbjct: 239 LEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCME 298

Query: 454 EKSYDACALYGAALKQGVIPQ 474
           ++S +A  +    +  G+ P+
Sbjct: 299 KRSREAKLMLLEMIDVGLKPE 319


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 202/409 (49%), Gaps = 8/409 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE  +IFDS+   G    +  +  LL            +  F+   S G+A +   F+I+
Sbjct: 387 KEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNIL 446

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I  Y  +    +A  +   M   G  P+V T++ ++++  + GRL +A+E  +QM   G 
Sbjct: 447 IHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGI 506

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL-KPDVYTYTAVMDGFCKVGRSNEAM 245
           +PN   Y+ +++G C  G + +A E++  + N G+ +PD+  + +V++  CK GR  +A 
Sbjct: 507 QPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAH 566

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++ +   + G  P+V+TF +L +GYC  G   K   +L  M+      D ++YSTLL+G 
Sbjct: 567 DIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGY 626

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I   +++F+EM R G +      N++  G+ +           A + F +M +  
Sbjct: 627 FKNGRINDGLTLFREMQRKGVKP-----NTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT-FNNVIQALCGEGKIDKA 424
           +      YGI++  L +    DEA+I L   +   ++  +IT  N +I A+    + ++A
Sbjct: 682 TTVTVSIYGIILGGLCRNNCADEAII-LFQKLGTMNVKFSITILNTMINAMYKVQRKEEA 740

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L   +     +P+ ++Y ++I  L +     DA  ++ +  K G++P
Sbjct: 741 KELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVP 789



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 188/409 (45%), Gaps = 6/409 (1%)

Query: 67  KERIDIFDSIKKDGTNWS--VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           +  +D+F  + K+G   S  V  +N ++       E   A   F E +  G+ P+  T++
Sbjct: 245 QRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYN 304

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           ++I   C      +A  V+  M  NG  P+  T+  +++     GRLKEA ++  +M   
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSR 364

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  PNI   N  L  LC  GR +EA E+  ++   G KPD+ +Y  ++ G+   G   + 
Sbjct: 365 GLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADM 424

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           + L N     G+  +   FN L + Y K G     + +   M+++   PD ++YST+++ 
Sbjct: 425 IGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISA 484

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             + G++  A+  F +MV  G + +  + +S+++G CM       L++    V E + K 
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGG----LVKAKELVSEMINKG 540

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +   D   +  VI +L K  +  +A        ++G  P  ITF ++I   C  GK+DKA
Sbjct: 541 IPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKA 600

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +L  M          +Y  L+    +  +  D   L+    ++GV P
Sbjct: 601 FKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKP 649



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 188/386 (48%), Gaps = 31/386 (8%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +F+S+K +G       FN L+ A       + A+  F+E    G++P+  T+S +I  
Sbjct: 425 IGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISA 484

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC-KP 188
           +       +A +  + M   G  PN   +  ++   C  G L +A E++ +M   G  +P
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           +I  +N ++  LC  GRV +A+++   V + G +PDV T+T+++DG+C VG+ ++A ++L
Sbjct: 545 DIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKIL 604

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           +     GV  ++VT++TL +GY K G    G+ L + M+++   P+ ++Y  +L GL + 
Sbjct: 605 DAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL----------------- 351
           G+   A   F EM+  G  V   +   +L GLC  +  ++ ++                 
Sbjct: 665 GRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITIL 724

Query: 352 -------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
                        E+A ++F  ++    + +  TYG++I  L K    ++A        +
Sbjct: 725 NTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEK 784

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKA 424
            G +P +   N +I+ L  +G+I KA
Sbjct: 785 SGIVPGSRLLNRIIRMLLEKGEIAKA 810



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 164/356 (46%), Gaps = 8/356 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK-FFSEASSYGLAPNSWTFSIMIRCY 130
           +F  I + G        + LL  L   N  E AV       S  G  PN +++SI+++  
Sbjct: 179 LFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGL 238

Query: 131 CNKNDFFEARKVIDCMFDNG--YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
           C+ +    A  +   M   G    PNV  +  +++   K G   +A  +  +M R G KP
Sbjct: 239 CDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKP 298

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           ++ TYN ++  LC    +++A  +L  +  +G +PD  TY  ++ G+  +GR  EA ++ 
Sbjct: 299 DVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMF 358

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
            +   RG+ PN+V  N+     CK G   +   +   M  +   PD +SY TLL+G    
Sbjct: 359 RKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASE 418

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G     + +F  M   G   D R+ N L+      ++ ++ +++DA  +F +M ++    
Sbjct: 419 GWFADMIGLFNSMKSNGIAADCRVFNILIH-----AYAKRGMVDDAMLIFTEMQQQGVSP 473

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           D  TY  VI    +  +  +A+   +  +  G  P T  ++++IQ  C  G + KA
Sbjct: 474 DVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKA 529



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 197/468 (42%), Gaps = 66/468 (14%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F  + + G    V  +N ++ AL      + A     + ++ G  P++ T++ MI  Y 
Sbjct: 287 LFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYA 346

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA K+   M   G  PN+      + SLCK GR KEA E+ D M   G KP+I 
Sbjct: 347 TLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIV 406

Query: 192 TYNCLLKGL------------------------CYV-----------GRVEEAYEMLMNV 216
           +Y  LL G                         C V           G V++A  +   +
Sbjct: 407 SYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM 466

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           +  G+ PDV TY+ V+  F ++GR  +AME  N+ + RG+ PN   ++++  G+C  G  
Sbjct: 467 QQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGL 526

Query: 277 MKGVGLLKLMKKRNC-LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
           +K   L+  M  +    PD + +++++N L K G++  A  IF  +   G   D     S
Sbjct: 527 VKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTS 586

Query: 336 LLRGLCM-----KSWEEKDLLE-------------------------DAYQVFEKMTKKV 365
           L+ G C+     K+++  D +E                         D   +F +M +K 
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKG 646

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TYGI++  L +  +T  A    H  IE G       +  ++  LC     D+A+
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +L   +       S T  + +I  + ++++  +A  L+      G++P
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLP 754



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 157/358 (43%), Gaps = 43/358 (12%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
            V T++IL++  C++ R    L +   + R G K +  T + LLK LCY  R EEA  +L
Sbjct: 156 TVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVL 215

Query: 214 MNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG--VTPNVVTFNTLFNGY 270
           ++  ++ G  P+V++Y+ ++ G C    S  A++L     + G   +PNVV +NT+ +G+
Sbjct: 216 LHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGF 275

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
            KEG   K   L   M ++   PD ++Y+ +++ L K   +  A  + ++M   G + D 
Sbjct: 276 FKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDT 335

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N ++ G     +     L++A ++F KM  +  + +       + +L K  ++ EA 
Sbjct: 336 VTYNCMIHG-----YATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA 390

Query: 391 IHLHHAIEMGHIPRTIT-----------------------------------FNNVIQAL 415
                    GH P  ++                                   FN +I A 
Sbjct: 391 EIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAY 450

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              G +D A+L+   M +    P   +Y  +I+   ++ +  DA   +   + +G+ P
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQP 508



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/268 (21%), Positives = 110/268 (41%), Gaps = 1/268 (0%)

Query: 44  DLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQE 102
           D+ E P  +     +D       + +   I D+++  G    +  ++ LL          
Sbjct: 574 DIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIN 633

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
             +  F E    G+ PN+ T+ IM+           ARK    M ++G    V+ + I++
Sbjct: 634 DGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIIL 693

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
             LC++    EA+ +  ++G +  K +I   N ++  +  V R EEA E+   +   GL 
Sbjct: 694 GGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLL 753

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P+  TY  ++    K G   +A  + +   + G+ P     N +     ++G   K    
Sbjct: 754 PNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNY 813

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGK 310
           L  +  +  L +  + S +L+   + GK
Sbjct: 814 LSKVDGKRILLEASTTSLMLSLFSRKGK 841


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 178/352 (50%), Gaps = 19/352 (5%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN------DFFEARKVIDCMFDNGYHPNV 155
           E A  FF +    GL  N +TF+++I     K       D FE  K+      NG  PN+
Sbjct: 214 ERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKI------NGLFPNL 267

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
            T+  L+N  C  G++  A ++ D+M   G + N+ TYN L+ G+C   RV EA +++  
Sbjct: 268 YTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQ 327

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +K   + P++ TY  ++ GFC VG  ++A  LL++    G++P++VT+N L  GY K G 
Sbjct: 328 MKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGN 387

Query: 276 PMKGVG-LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
             KGV  L + M+ R   P K++ + L++  ++  ++  A  I+  M +FG   D  +  
Sbjct: 388 -WKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYG 446

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            L+ GLCMK       ++++ ++F  M +         Y  +I    K   +  AL  L 
Sbjct: 447 VLIHGLCMKGN-----MKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLR 501

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
                G +P   +++++I  LC +GK ++A +LL  M E    PS +  +M+
Sbjct: 502 EMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 214/488 (43%), Gaps = 48/488 (9%)

Query: 8   NSFIFTNTNRRNHNKIPQFNKLVV-----------FAAASLSTAESLDLKENPRSLQAQR 56
           +S  F   +  +H+K+P    L++           F   SL     L   +NP    A  
Sbjct: 38  HSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSL--LHHLTQNQNPSMTTALL 95

Query: 57  FVDRIKASPLKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
           +   I A    + +D     F+ +   G  +  + FN LL +LV  N  E A  FF+E  
Sbjct: 96  YESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELK 155

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
              +  + ++F IMI+  C   +  ++ +++  + D G  PNV  +T L++  CK+G ++
Sbjct: 156 ER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIE 214

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
            A    D+MG +G   N  T+  L+ GL   G  ++ +++   +K +GL P++YTY  +M
Sbjct: 215 RARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLM 274

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           + +C  G+   A +L +E  ERGV  NVVT+NTL  G C+E    +   L+  MKK    
Sbjct: 275 NEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVS 334

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG------------- 339
           P+ I+Y+TL+ G    G +  A S+  ++   G        N L+ G             
Sbjct: 335 PNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADL 394

Query: 340 -----------------LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
                            + + ++     +E A+Q++  M K   V D   YG++I  L  
Sbjct: 395 AREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCM 454

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
                E+        EM   P  + +N +I   C E    +AL LL  M     +P+  S
Sbjct: 455 KGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVAS 514

Query: 443 YDMLITKL 450
           Y  +I  L
Sbjct: 515 YSSIIGVL 522



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 76/162 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA   K   D+   ++  G + S      L+ A V L E E A + +S    +GL P+ +
Sbjct: 384 KAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVY 443

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            + ++I   C K +  E+ K+   M +    P+   +  +++  CK      AL +L +M
Sbjct: 444 VYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREM 503

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
              G  PN+ +Y+ ++  LC  G+ EEA  +L  +    LKP
Sbjct: 504 EAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKP 545



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 98/237 (41%), Gaps = 44/237 (18%)

Query: 240 RSN---EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           RSN   +A    NE  ER V  +V +F  +  G C+ G   K   LL L++     P+ +
Sbjct: 140 RSNCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVV 198

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
            Y+TL++G  K G I  A   F +M   G   ++     L+ GL      +K L +D + 
Sbjct: 199 IYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLF-----KKGLKKDGFD 253

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +FEKM  K++                                 G  P   T+N ++   C
Sbjct: 254 LFEKM--KIN---------------------------------GLFPNLYTYNCLMNEYC 278

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           GEGKI +A  L   M E     +  +Y+ LI  + + E+ ++A  L     K  V P
Sbjct: 279 GEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSP 335



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 74/153 (48%), Gaps = 1/153 (0%)

Query: 48  NPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           +P  +     +D  ++   +++   I+ S++K G    V  +  L+  L M    + + K
Sbjct: 404 SPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSK 463

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F       + P+   ++ MI  YC +++ + A +++  M   G  PNV +++ ++  LC
Sbjct: 464 LFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLC 523

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
           K G+ +EA  +LD+M  +  KP+    N + K 
Sbjct: 524 KDGKWEEAEVLLDKMIELQLKPSASILNMISKA 556



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 6/176 (3%)

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y +++N  LK   +  A+  F EMV  G      + NSLL  L        +  E A+  
Sbjct: 96  YESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLV-----RSNCFEKAWLF 150

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           F ++ ++V   D  ++GI+I+   +    D++   L    +MG  P  + +  +I   C 
Sbjct: 151 FNELKERVKF-DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCK 209

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            G I++A L    M E   + ++ ++ +LI  L +     D   L+      G+ P
Sbjct: 210 NGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFP 265


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 186/378 (49%), Gaps = 6/378 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+++ IK  GT  S    + ++  L   +    AV F  +      AP+  +F+ ++  Y
Sbjct: 136 DVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRY 195

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C       A+     M   G  P+  ++ IL++ L  +G ++EALE+ + M + G +P++
Sbjct: 196 CKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDM 255

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
            TY  + KG   +G +  A E++  +  D GLKPD+ TYT ++ G C++G   EA+ L  
Sbjct: 256 VTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRR 315

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           + +  G   NV+ ++ L +  CK G   + + LL  M+  N  PD ++YS L++GL K G
Sbjct: 316 DLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQG 375

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K++ A+ ++KEM       +    + +L+GLC     EK +L DA   F+ +       D
Sbjct: 376 KVQQAIQLYKEMCFNRIFPNSFAHSGILKGLC-----EKGMLSDARMYFDSLIMSNLRPD 430

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
              Y I+I    K    +EA+       +    P  +TFN++I   C   K+ +A  LL 
Sbjct: 431 VTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLE 490

Query: 430 LMYEHAKIPSRTSYDMLI 447
            +  H   PS  +Y  L+
Sbjct: 491 SIKLHGLEPSAVTYTTLM 508



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 184/394 (46%), Gaps = 31/394 (7%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L++    E A++  ++    GL P+  T+ I+ + +        AR++I  M 
Sbjct: 223 YNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKML 282

Query: 148 -DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            D G  P++ T+T+L+   C+ G ++EAL +   +   G + N+  Y+ LL  LC  G+V
Sbjct: 283 TDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQV 342

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA ++L  ++ + L+PD+ TY+ ++ G CK G+  +A++L  E     + PN    + +
Sbjct: 343 DEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGI 402

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             G C++G           +   N  PD   Y+ +++G +K G +  AV ++K +     
Sbjct: 403 LKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAI 462

Query: 327 EVDERMMNSLLRGLC--MKSWEEKDLLE------------------DAY----------Q 356
                  NSL+ G C   K  E + LLE                  +AY          +
Sbjct: 463 TPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHE 522

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +  +M  K       TY +VI+ L K +K +E++  L      G  P  IT+N +IQ  C
Sbjct: 523 LLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFC 582

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
               + KA  LL  M  H   P+  +Y++LI  L
Sbjct: 583 KAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGL 616



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 144/271 (53%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FDS+        V+ +N ++   V L + E AV+ +       + P+  TF+ +I  +C 
Sbjct: 419 FDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCK 478

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
                EAR++++ +  +G  P+  T+T L+N+ C+ G + +  E+L +M     +P + T
Sbjct: 479 NRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVT 538

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y  ++KGLC   ++EE+ ++L +++  GL PD  TY  ++  FCK     +A ELL++ +
Sbjct: 539 YTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDML 598

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
              + P   T+N L +G C+ G       +L  ++ RN    K++Y+T++      G  +
Sbjct: 599 IHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQ 658

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            AV +F +MV  GFEV  +  ++++  LC +
Sbjct: 659 RAVKVFHQMVEKGFEVSIKDYSAVINRLCKR 689



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 161/323 (49%), Gaps = 5/323 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A++   +  S G   N   +S+++   C +    EA +++  M  N   P++ T++IL
Sbjct: 308 EEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSIL 367

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ LCK G++++A+++  +M      PN   ++ +LKGLC  G + +A     ++    L
Sbjct: 368 IHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNL 427

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +PDV  Y  ++DG+ K+G   EA+ L     ++ +TP++VTFN+L  G+CK    ++   
Sbjct: 428 RPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARR 487

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           LL+ +K     P  ++Y+TL+N   + G I     +  EM     E        +++GLC
Sbjct: 488 LLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLC 547

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                ++  LE++ Q+ E M  K    D  TY  +I+   K K   +A   L   +    
Sbjct: 548 -----KQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNL 602

Query: 402 IPRTITFNNVIQALCGEGKIDKA 424
            P   T+N +I  LC  G ++ A
Sbjct: 603 EPTPATYNVLIDGLCRYGDVEDA 625



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 186/411 (45%), Gaps = 5/411 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +   ++ +     +  ++ L+  L    + + A++ + E     + PNS+
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
             S +++  C K    +AR   D +  +   P+VT + I+++   K G ++EA+ +  ++
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P+I T+N L+ G C   +V EA  +L ++K  GL+P   TYT +M+ +C+ G  
Sbjct: 458 RDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNI 517

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           N+  ELL E   + + P VVT+  +  G CK+    + V LL+ M+ +   PD+I+Y+T+
Sbjct: 518 NKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTI 577

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +    K   +R A  +  +M+    E      N L+ GLC         +EDA +V   +
Sbjct: 578 IQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGD-----VEDADRVLVSL 632

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +        Y  +I+          A+   H  +E G       ++ VI  LC    I
Sbjct: 633 QDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLI 692

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           ++A     +M      P +  ++M++    +    +    L    +K G++
Sbjct: 693 NEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLL 743



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 194/416 (46%), Gaps = 17/416 (4%)

Query: 65  PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
            L+ R D+  S    G   +V  ++ LL +L    + + A++   E  +  L P+  T+S
Sbjct: 310 ALRLRRDLLSS----GFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYS 365

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           I+I   C +    +A ++   M  N   PN    + ++  LC+ G L +A    D +   
Sbjct: 366 ILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMS 425

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
             +P++  YN ++ G   +G VEEA  +   +++  + P + T+ +++ GFCK  +  EA
Sbjct: 426 NLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEA 485

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             LL      G+ P+ VT+ TL N YC+EG   K   LL  M  ++  P  ++Y+ ++ G
Sbjct: 486 RRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKG 545

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K  K+  +V + ++M   G   D+   N++++  C    + KD +  A+++ + M   
Sbjct: 546 LCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFC----KAKD-MRKAFELLDDMLIH 600

Query: 365 VSVTDPGTYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRT-ITFNNVIQALCGEGK 420
                P TY ++I  L   G  +  D  L+ L       +I  T + +  +I+A C +G 
Sbjct: 601 NLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDR----NINLTKVAYTTMIKAHCVKGD 656

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
             +A+ +   M E     S   Y  +I +L +     +A   +   L  GV P ++
Sbjct: 657 AQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQE 712



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 182/396 (45%), Gaps = 20/396 (5%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEA-------SSYGLAPNSWTFSIMIRCYCNKNDFFEAR 140
           F DL + L  + ++E A +   +A           L P+  T++ ++    + +  ++  
Sbjct: 79  FKDLRLVLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVY 138

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
             I    D+G   +  T +I+V+ LC   R ++A+  L Q       P++ ++N ++   
Sbjct: 139 NDIK---DSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRY 195

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C +G  + A      +   G+ PD Y+Y  ++ G    G   EA+EL N+  ++G+ P++
Sbjct: 196 CKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDM 255

Query: 261 VTFNTLFNGYCKEGTPMKGVG--LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           VT+  +  G+   G  M G    + K++      PD ++Y+ L+ G  + G I  A+ + 
Sbjct: 256 VTYKIVAKGFHLLGL-MSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLR 314

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           ++++  GF+++  + + LL  LC +       +++A Q+  +M       D  TY I+I 
Sbjct: 315 RDLLSSGFQLNVILYSVLLSSLCKRGQ-----VDEALQLLYEMEANNLQPDLVTYSILIH 369

Query: 379 TLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
            L K  K  +A I L+  +    I P +   + +++ LC +G +  A +    +      
Sbjct: 370 GLCKQGKVQQA-IQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLR 428

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P  T Y+++I    +L    +A  LY     + + P
Sbjct: 429 PDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITP 464



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 134/283 (47%), Gaps = 4/283 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   ++E + ++  ++      S+  FN L+       +   A +       +GL P++
Sbjct: 442 VKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSA 501

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ ++  YC + +  +  +++  M      P V T+T+++  LCK  +L+E++++L+ 
Sbjct: 502 VTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLED 561

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P+  TYN +++  C    + +A+E+L ++    L+P   TY  ++DG C+ G 
Sbjct: 562 MRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGD 621

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A  +L    +R +    V + T+   +C +G   + V +   M ++        YS 
Sbjct: 622 VEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSA 681

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGF----EVDERMMNSLLRG 339
           ++N L K   I  A   F  M+  G     E+ E M+N+  R 
Sbjct: 682 VINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRA 724



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 91/193 (47%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E +V+   +  + GLAP+  T++ +I+C+C   D  +A +++D M  +   P   T+ +L
Sbjct: 553 EESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVL 612

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ LC+ G +++A  VL  +           Y  ++K  C  G  + A ++   +   G 
Sbjct: 613 IDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGF 672

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +  +  Y+AV++  CK    NEA       +  GV+P+   F  + N + + G       
Sbjct: 673 EVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFE 732

Query: 282 LLKLMKKRNCLPD 294
           LL +M K   L D
Sbjct: 733 LLAVMIKFGLLHD 745



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 68/163 (41%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++  ++ D +       + + +N L+  L    + E A +         +     
Sbjct: 583 KAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKV 642

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ MI+ +C K D   A KV   M + G+  ++  ++ ++N LCK   + EA      M
Sbjct: 643 AYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIM 702

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
              G  P+ + +  +L      G V   +E+L  +   GL  D
Sbjct: 703 LSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 214/476 (44%), Gaps = 41/476 (8%)

Query: 33  AAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLL 92
           A ASLS     +++     L  + +  + K       +D+F  +   G   S +  N LL
Sbjct: 174 AMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILL 233

Query: 93  MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
            +LV  NE +   + F +    G++P+ + F+  I  +C      EA K+   M + G  
Sbjct: 234 TSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA 292

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           PNV TF  +++ L   GR  EA    ++M   G +P + TY+ L+KGL    R+ +AY +
Sbjct: 293 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 352

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G  P+V  Y  ++D F + G  N+A+E+ +  + +G++    T+NTL  GYCK
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412

Query: 273 EGTPMKGVGLLKLMKK-----------------------------------RNCLPDKIS 297
            G       LLK M                                     RN  P    
Sbjct: 413 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
            +TL++GL K GK   A+ ++ + +  GF VD R  N+LL GLC     E   L++A+++
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC-----EAGKLDEAFRI 527

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            +++  +  V D  +Y  +I      KK DEA + L   ++ G  P   T++ +I  L  
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             K+++A+        +  +P   +Y ++I    + E++ +    +   + + V P
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 132/249 (53%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E     D + K G       ++ L+  L  +N+ E A++F+ +    G+ P+ +T+S+
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI   C      E ++  D M      PN   +  L+ + C+SGRL  ALE+ + M   G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TY  L+KG+  + RVEEA  +   ++ +GL+P+V+ YTA++DG+ K+G+  +  
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL E   + V PN +T+  +  GY ++G   +   LL  M+++  +PD I+Y   + G 
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795

Query: 306 LKWGKIRPA 314
           LK G +  A
Sbjct: 796 LKQGGVLEA 804



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 199/447 (44%), Gaps = 40/447 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E + +F  +++ G   +V  FN ++  L M    + A  F  +    G+ P   
Sbjct: 272 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 331

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+++         +A  V+  M   G+ PNV  +  L++S  ++G L +A+E+ D M
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV---------- 231
              G      TYN L+KG C  G+ + A  +L  + + G   +  ++T+V          
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451

Query: 232 -------------------------MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                                    + G CK G+ ++A+EL  + + +G   +  T N L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G C+ G   +   + K +  R C+ D++SY+TL++G     K+  A     EMV+ G 
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + D    + L+ GL        + +E+A Q ++   +   + D  TY ++I    K ++T
Sbjct: 572 KPDNYTYSILICGLF-----NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           +E        +     P T+ +N++I+A C  G++  AL L   M      P+  +Y  L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I  +  + +  +A  L+     +G+ P
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEP 713



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 133/278 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L E   I   I   G       +N L+       + + A  F  E    GL P+++
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+I    N N   EA +  D    NG  P+V T++++++  CK+ R +E  E  D+M
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                +PN   YN L++  C  GR+  A E+  ++K+ G+ P+  TYT+++ G   + R 
Sbjct: 637 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 696

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L  E    G+ PNV  +  L +GY K G  +K   LL+ M  +N  P+KI+Y+ +
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + G  + G +  A  +  EM   G   D       + G
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 158/335 (47%), Gaps = 5/335 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  L    +   A++ + +  + G   ++ T + ++   C      EA ++   +   G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              +  ++  L++  C   +L EA   LD+M + G KP+  TY+ L+ GL  + +VEEA 
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           +   + K +G+ PDVYTY+ ++DG CK  R+ E  E  +E + + V PN V +N L   Y
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+ G     + L + MK +   P+  +Y++L+ G+    ++  A  +F+EM   G E + 
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +L+ G     + +   +     +  +M  K    +  TY ++I    +     EA 
Sbjct: 716 FHYTALIDG-----YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
             L+   E G +P +IT+   I     +G + +A 
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 178/413 (43%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+A  L + I+I D +   G + + S +N L+       + + A +   E  S G   N 
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +F+ +I   C+   F  A + +  M      P     T L++ LCK G+  +ALE+  Q
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
               G   + +T N LL GLC  G+++EA+ +   +   G   D  +Y  ++ G C   +
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA   L+E ++RG+ P+  T++ L  G        + +      K+   LPD  +YS 
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++G  K  +       F EM+    + +  + N L+R  C         L  A ++ E 
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR-----LSMALELRED 670

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  K    +  TY  +I+ +    + +EA +        G  P    +  +I      G+
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + K   LL  M+     P++ +Y ++I    +     +A  L     ++G++P
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 158/354 (44%), Gaps = 9/354 (2%)

Query: 125 IMIRCYCN---KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++I  YC    ++  + A  V   + + G  P+ TT  IL+ SL ++   ++  E  D +
Sbjct: 193 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 252

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P++  +   +   C  G+VEEA ++   ++  G+ P+V T+  V+DG    GR 
Sbjct: 253 CK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA     + +ERG+ P ++T++ L  G  +         +LK M K+   P+ I Y+ L
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++  ++ G +  A+ I   MV  G  +     N+L++G C     +     +A ++ ++M
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD-----NAERLLKEM 426

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  + G++  VI  L      D AL  +   +     P       +I  LC  GK 
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            KAL L F       +    + + L+  L +  K  +A  +    L +G +  R
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 84/185 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA   +E  + FD +       +   +N L+ A         A++   +    G++PNS 
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+     +   EA+ + + M   G  PNV  +T L++   K G++ +   +L +M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 PN  TY  ++ G    G V EA  +L  ++  G+ PD  TY   + G+ K G  
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801

Query: 242 NEAME 246
            EA +
Sbjct: 802 LEAFK 806



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 10/177 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           ++  L   +++ + +K  G + + + +  L+  + +++  E A   F E    GL PN +
Sbjct: 657 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 716

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  Y       +   ++  M     HPN  T+T+++    + G + EA  +L++M
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
              G  P+  TY   + G    G V EA++            D   Y A+++G+ K+
Sbjct: 777 REKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAIIEGWNKL 823


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 190/390 (48%), Gaps = 8/390 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN++L +LV      T +  F +    G+ P+  T SI+I C+C++     A  V   + 
Sbjct: 61  FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 120

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G+HP+  T   L+  LC  G +K+ L   DQ+   G + +  +Y  L+ GLC  G  +
Sbjct: 121 KRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETK 180

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
               +L  ++   +KPDV  Y  +++  CK     +A ++ +E I +G++P+VVT+ TL 
Sbjct: 181 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 240

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK---IRPAVSIFKEMVRF 324
           +G+C  G   +   LL  MK +N  PD  ++S L++ L K GK   +  A+S+F+EM   
Sbjct: 241 HGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHK 300

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
               D    NSL+ GLC     +   LE A  + ++M +     D  +Y I++  L KG 
Sbjct: 301 NMIPDIVTYNSLIDGLC-----KNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGG 355

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + + A     H +  G       +N +I  LC  G   +A+ L   M     +P+  ++ 
Sbjct: 356 RLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFR 415

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            +I  L + +++  A  +    + +G++ +
Sbjct: 416 TIICALSEKDENDKAEKILREMIARGLLKE 445



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 162/322 (50%), Gaps = 8/322 (2%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
            +F +I K G +      N L+  L    E +  + F  +  + G   +  ++  +I   
Sbjct: 114 SVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGL 173

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +     +++  +  +   P+V  +  ++NSLCK+  L +A +V  +M   G  P++
Sbjct: 174 CKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDV 233

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS---NEAMEL 247
            TY  L+ G C +G+++EA+ +L  +K   + PDVYT++ ++D   K G+    +EAM L
Sbjct: 234 VTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSL 293

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E   + + P++VT+N+L +G CK     + + LLK MK+    PD  SY+ LL+GL K
Sbjct: 294 FEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 353

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G++  A   F+ ++  G  ++    N ++ GLC     +  L  +A  +  KM  K  +
Sbjct: 354 GGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLC-----KAGLFGEAMDLKSKMEGKGCM 408

Query: 368 TDPGTYGIVIRTLGKGKKTDEA 389
            +  T+  +I  L +  + D+A
Sbjct: 409 PNAITFRTIICALSEKDENDKA 430



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 141/301 (46%), Gaps = 8/301 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P    F  +++SL K+ R    + +  Q    G  P++ T + L+   C+   +  A+ +
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
             N+   G  PD  T   ++ G C  G   + +   ++ + +G   + V++ TL NG CK
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G       LL+ ++  +  PD + Y+T++N L K   +  A  ++ EM+  G   D   
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK-GKK--TDEA 389
             +L+ G C+        +++A+ +  +M  K    D  T+ ++I  LGK GKK   DEA
Sbjct: 236 YTTLIHGFCIMGK-----MKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEA 290

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
           +           IP  +T+N++I  LC    +++A+ LL  M EH   P   SY +L+  
Sbjct: 291 MSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDG 350

Query: 450 L 450
           L
Sbjct: 351 L 351



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 131/299 (43%), Gaps = 38/299 (12%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +   D +   G       +  L+  L    E +   +   +   + + P+   ++ 
Sbjct: 144 IKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNT 203

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM---- 181
           +I   C      +A  V   M   G  P+V T+T L++  C  G++KEA  +L++M    
Sbjct: 204 IINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKN 263

Query: 182 ---------------GRIGCK-------------------PNIQTYNCLLKGLCYVGRVE 207
                          G+ G K                   P+I TYN L+ GLC    +E
Sbjct: 264 INPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLE 323

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A  +L  +K  G++PDVY+YT ++DG CK GR   A E     + +G   NV  +N + 
Sbjct: 324 RAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMI 383

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
           NG CK G   + + L   M+ + C+P+ I++ T++  L +  +   A  I +EM+  G 
Sbjct: 384 NGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 211/474 (44%), Gaps = 69/474 (14%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L++ + +   +++ G   ++   N  +   V  N  E A++F       G+ PN  
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ MIR YC+ +   EA ++++ M   G  P+  ++  ++  LCK  R+ E  +++ +M
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373

Query: 182 GR-IGCKPNIQTYNCLL-----------------------------------KGLCYVGR 205
            +  G  P+  TYN L+                                     LC  GR
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433

Query: 206 VEEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           + EA +++  + + G   PDV TYTAV++GFC++G  ++A +LL      G  PN V++ 
Sbjct: 434 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYT 493

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L NG C+ G  ++   ++ + ++    P+ I+YS +++GL + GK+  A  + +EMV  
Sbjct: 494 ALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLK 553

Query: 325 GFEVDERMMNSLLRGLC------------------------------MKSWEEKDLLEDA 354
           GF      +N LL+ LC                              +  + + D L+ A
Sbjct: 554 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 613

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
             V + M       D  TY  ++ TLGK  +  EA   +   +  G  P  +T+  VI  
Sbjct: 614 LSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHR 673

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
            C  GK+D  + +L  M    K   RT Y+ +I KL  L K  +A  L G  L+
Sbjct: 674 YCQMGKVDDLVAILEKMISRQK--CRTIYNQVIEKLCVLGKLEEADTLLGKVLR 725



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 185/426 (43%), Gaps = 67/426 (15%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+      FS ++  Y       +A KV+  M   G  PN+      ++   ++ RL++A
Sbjct: 237 GIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKA 296

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L  L++M  +G  PN+ TYNC+++G C + RVEEA E+L ++ + G  PD  +Y  +M  
Sbjct: 297 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGY 356

Query: 235 FCKVGRSNEAMELLNE-AIERGVTPNVVTFNTLFN------------------------- 268
            CK  R  E  +L+ + A E G+ P+ VT+NTL +                         
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416

Query: 269 ---GY-------CKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
              GY       CKEG   +   L+ +++ K +C PD ++Y+ ++NG  + G++  A  +
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 476

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDL------------------------- 350
            + M   G + +     +LL G+C   KS E +++                         
Sbjct: 477 LQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRR 536

Query: 351 ---LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
              L +A  V  +M  K     P    +++++L +  +T EA   +   +  G     + 
Sbjct: 537 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           F  VI   C   ++D AL +L  MY   K     +Y  L+  L +  +  +A  L    L
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656

Query: 468 KQGVIP 473
            +G+ P
Sbjct: 657 HKGIDP 662



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 188/381 (49%), Gaps = 14/381 (3%)

Query: 99  NEQETAVKFFSEAS-SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           +++  A+KFF  A   +    +   +  M+           +R+V+  M   G +     
Sbjct: 185 DDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEA 244

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F+ ++ S  ++G+L++AL+VL  M R G +PN+   N  +       R+E+A   L  ++
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G+ P+V TY  ++ G+C + R  EA+ELL +   +G  P+ V++ T+    CKE   +
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364

Query: 278 KGVGLLKLMKKRNCL-PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
           +   L+K M K + L PD+++Y+TL++ L K      A+   K+    GF +D+   +++
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424

Query: 337 LRGLCMKSW--EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA--LIH 392
           +  LC +    E KDL+       E ++K     D  TY  V+    +  + D+A  L+ 
Sbjct: 425 VHALCKEGRMSEAKDLIN------EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           + H    GH P T+++  ++  +C  GK  +A  ++ +  EH   P+  +Y +++  L +
Sbjct: 479 VMHT--HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRR 536

Query: 453 LEKSYDACALYGAALKQGVIP 473
             K  +AC +    + +G  P
Sbjct: 537 EGKLSEACDVVREMVLKGFFP 557



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 2/264 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   L E  D+   +   G      + N LL +L        A KF  E  + G A N  
Sbjct: 536 REGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVV 595

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  +C  ++   A  V+D M+    H +V T+T LV++L K GR+ EA E++ +M
Sbjct: 596 NFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKM 655

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P   TY  ++   C +G+V++   +L  + +      +  Y  V++  C +G+ 
Sbjct: 656 LHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKL 713

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  LL + +      +  T   L  GY K+G P+    +   M  RN +PD      L
Sbjct: 714 EEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKL 773

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFG 325
              L+  GK+  A  +   +V  G
Sbjct: 774 SKRLVLKGKVDEADKLMLRLVERG 797


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 140/254 (55%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD+I K G   SV  FN L+   + L + +   +  +   + G+ P+ +T +++I   C
Sbjct: 158 VFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLC 217

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            ++   EA ++ + M D G  PN  TFT L++  CKSGR+  ALE+  QM R G  P++ 
Sbjct: 218 KESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLI 277

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ GLC  G +++A ++++ +   GLKPD  TYT ++DG CK G    A EL    
Sbjct: 278 TYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRM 337

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           IE  +  + V +  L +G C+EG  +    +L+ M      P+  +Y+ ++NG  K G +
Sbjct: 338 IEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDV 397

Query: 312 RPAVSIFKEMVRFG 325
           + A  + KEM R G
Sbjct: 398 KTASKLLKEMQRDG 411



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 168/347 (48%), Gaps = 5/347 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +++  L++ I+ F   +K            +L  L+ L   +    F+ E    G   + 
Sbjct: 77  LESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPTSL 136

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           + F+I++  +C + +   A+ V D +   G  P+V +F  L+N   + G L +   +   
Sbjct: 137 YFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTA 196

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P++ T   L+ GLC   +++EA E+   + + GL P+  T+T ++DG CK GR
Sbjct: 197 MHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGR 256

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A+E+  + + +G +P+++T+NTL  G C++G   +   L+  M  +   PDKI+Y+T
Sbjct: 257 VDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTT 316

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G  K G +  A  + K M+     +D+    +L+ GLC     ++    DA ++  +
Sbjct: 317 LIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLC-----QEGRAVDAEKMLRE 371

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           M       + GTY ++I    K      A   L      GH+P  +T
Sbjct: 372 MLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCVVT 418



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 159/334 (47%), Gaps = 44/334 (13%)

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
           +++++C    GY  ++  F IL++  CK G ++ A  V D + + G +P++ ++N L+ G
Sbjct: 125 KEILEC----GYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLING 180

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
              +G +++ + +   +   G+ PDVYT T +++G CK  + +EA EL NE +++G+ PN
Sbjct: 181 YIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPN 240

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VTF TL +G+CK G     + + K M ++   PD I+Y+TL+ GL + G ++ A  +  
Sbjct: 241 GVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIV 300

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM   G + D+    +L+ G C    +E DL E A+++ ++M ++    D          
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSC----KEGDL-ETAFELRKRMIEESIRLDD--------- 346

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
                                     + +  +I  LC EG+   A  +L  M      P 
Sbjct: 347 --------------------------VAYTALISGLCQEGRAVDAEKMLREMLSVGLKPE 380

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y M+I    +      A  L     + G +P
Sbjct: 381 NGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVP 414



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 130/306 (42%), Gaps = 47/306 (15%)

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G  KE LE        G   ++  +N L+   C  G +  A  +   +   GL+P V ++
Sbjct: 122 GFYKEILEC-------GYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSF 174

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
             +++G+ ++G  ++   L       GV P+V T   L NG CKE    +   L   M  
Sbjct: 175 NTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLD 234

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           +  +P+ ++++TL++G  K G++  A+ I+K+M+R G+  D    N+L+ GLC K     
Sbjct: 235 KGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGD--- 291

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             L+ A  +  +M+ K                                   G  P  IT+
Sbjct: 292 --LKQARDLIVEMSMK-----------------------------------GLKPDKITY 314

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
             +I   C EG ++ A  L   M E +      +Y  LI+ L Q  ++ DA  +    L 
Sbjct: 315 TTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLS 374

Query: 469 QGVIPQ 474
            G+ P+
Sbjct: 375 VGLKPE 380


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 196/424 (46%), Gaps = 26/424 (6%)

Query: 48  NPRSLQA--QRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAV 105
           +PR L A   + + R  +S       + DS+         S FN LL AL    +     
Sbjct: 98  SPRILSALLYKILSRSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMT 157

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF--DNGYHPNVTTFTILVN 163
           + F+      + PN  T+ I+++  C      +A  V+D M   ++   P+V     +V+
Sbjct: 158 QLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVD 217

Query: 164 SLCKSGRLKEALEVLDQMGRI--GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
            LCK+GRL++A++ +++  R   GC PN  TYNCL    C  G V  A E++  ++ + +
Sbjct: 218 GLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERV 277

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP----NVVTFNTLFNGYCKEGTPM 277
            P+  T   ++ G C VGR   A+E   E  +R V P    N VT++TL   +       
Sbjct: 278 TPNAVTLNTIVGGLCWVGRVGAALEFFRE--KRTVWPEARGNAVTYSTLVGAFLHTNNVG 335

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
             + L   M      PD I Y T+++GL + G++  A S+   M + GF++D +  N L+
Sbjct: 336 VAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILI 395

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK---KTDEALIHLH 394
            G C      +  L +AY++  +M +     D  TY  ++  L K       DE L  + 
Sbjct: 396 GGFC-----RRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKM- 449

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
             I+ G  P  +TF  +I   C  G+ID+AL +   M E    P+   Y+ LI   D L 
Sbjct: 450 --IDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLI---DFLC 504

Query: 455 KSYD 458
           KS D
Sbjct: 505 KSRD 508



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 169/339 (49%), Gaps = 11/339 (3%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP--NSWTFSIMIR 128
           ++   ++K+    +    N ++  L  +     A++FF E  +       N+ T+S ++ 
Sbjct: 267 ELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVG 326

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
            + + N+   A ++   M D G  P+   +  +++ L ++GRL +A  +   M + G + 
Sbjct: 327 AFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQL 386

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           + + YN L+ G C   R+ EAYE+L  +K  GL+PDVYTY  ++ G CK G      ELL
Sbjct: 387 DAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELL 446

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
            + I+ G  P+VVTF TL +GYCK G   + + + + M +    P+ + Y+TL++ L K 
Sbjct: 447 GKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKS 506

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
                A+ +F EM       +    N+LL+GL      +K++ E A+++ + M +     
Sbjct: 507 RDTSLAIELFDEMREKHVPANVTTFNALLKGL-----RDKNMPEKAFELMDLMREGRCTP 561

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           D  T  I++  L    +TD     L H ++    P+ +T
Sbjct: 562 DYVTIDILMEWLPVIGETD----RLKHFMQHDTTPKRMT 596



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 171/379 (45%), Gaps = 16/379 (4%)

Query: 104 AVKFFSEASSYGLAP-NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
           A +F  ++ + G  P ++  F+ ++       D     ++   M D    PNV T+ ILV
Sbjct: 120 AARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILV 179

Query: 163 NSLCKSGRLKEALEVLDQMG--RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND- 219
             LCK+GR+ +AL VLD M        P++   N ++ GLC  GR+++A + +       
Sbjct: 180 KGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSV 239

Query: 220 -GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            G  P+  TY  +   FC+ G    A EL+ +  +  VTPN VT NT+  G C  G    
Sbjct: 240 HGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGR--V 297

Query: 279 GVGLLKLMKKRNCLPDK----ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
           G  L    +KR   P+     ++YSTL+   L    +  A+ +F EMV  G   D  M  
Sbjct: 298 GAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYF 357

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           +++ GL      +   L+DA+ +   M K     D   Y I+I    + K+ +EA   L 
Sbjct: 358 TMISGL-----TQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLG 412

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
              E G  P   T+N ++  LC  G       LL  M +    PS  ++  LI    ++ 
Sbjct: 413 EMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVG 472

Query: 455 KSYDACALYGAALKQGVIP 473
           +  +A  ++ +  + G+ P
Sbjct: 473 QIDEALRIFRSMDESGIQP 491



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 171/400 (42%), Gaps = 81/400 (20%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEA--SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
            N+++  L      + AVKF  E   S +G APN+ T++ +   +C   +   A +++  
Sbjct: 212 LNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAK 271

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALE----------------------------- 176
           M      PN  T   +V  LC  GR+  ALE                             
Sbjct: 272 MEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHT 331

Query: 177 --------VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
                   +  +M   G  P+   Y  ++ GL   GR+++A+ M  ++K  G + D   Y
Sbjct: 332 NNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAY 391

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
             ++ GFC+  R NEA ELL E  E G+ P+V T+NTL +G CK G  +    LL  M  
Sbjct: 392 NILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMID 451

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
             C P  +++ TL++G  K G+I  A+ IF+ M   G + +  + N+L+  LC    + +
Sbjct: 452 GGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLC----KSR 507

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT- 407
           D    A ++F++M +K                                    H+P  +T 
Sbjct: 508 DT-SLAIELFDEMREK------------------------------------HVPANVTT 530

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           FN +++ L  +   +KA  L+ LM E    P   + D+L+
Sbjct: 531 FNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILM 570



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 122/241 (50%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++F  +  +G +     +  ++  L      + A    +     G   ++  ++I+I  
Sbjct: 338 MELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGG 397

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C +    EA +++  M + G  P+V T+  L++ LCK+G      E+L +M   GC+P+
Sbjct: 398 FCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPS 457

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + T+  L+ G C VG+++EA  +  ++   G++P+   Y  ++D  CK   ++ A+EL +
Sbjct: 458 VVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFD 517

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E  E+ V  NV TFN L  G   +  P K   L+ LM++  C PD ++   L+  L   G
Sbjct: 518 EMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIG 577

Query: 310 K 310
           +
Sbjct: 578 E 578



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 92/206 (44%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L +   +  S+KK G       +N L+           A +   E    GL P+ +
Sbjct: 365 QAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVY 424

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C   DF    +++  M D G  P+V TF  L++  CK G++ EAL +   M
Sbjct: 425 TYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSM 484

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +PN   YN L+  LC       A E+   ++   +  +V T+ A++ G       
Sbjct: 485 DESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMP 544

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLF 267
            +A EL++   E   TP+ VT + L 
Sbjct: 545 EKAFELMDLMREGRCTPDYVTIDILM 570



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 4/197 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++   +K+ G    V  +N LL  L    +     +   +    G  P+  TF  
Sbjct: 404 LNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGT 463

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC      EA ++   M ++G  PN   +  L++ LCKS     A+E+ D+M    
Sbjct: 464 LIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKH 523

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              N+ T+N LLKGL      E+A+E++  ++     PD  T   +M+    +G ++   
Sbjct: 524 VPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDR-- 581

Query: 246 ELLNEAIERGVTPNVVT 262
             L   ++   TP  +T
Sbjct: 582 --LKHFMQHDTTPKRMT 596


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 185/421 (43%), Gaps = 40/421 (9%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FND++       E   A++   E  S G+ P+ +++SI+I  +C K D  +   +++ M 
Sbjct: 394 FNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEME 453

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +   P++ ++T L++ LCK   L+ A+++   +G   CK +   Y  L+ G C  G ++
Sbjct: 454 HSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMD 513

Query: 208 EAYEML-------------------------------MNVKN----DGLKPDVYTYTAVM 232
            A ++L                               + V N    DG+ PD      ++
Sbjct: 514 SAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYIL 573

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           DG C+ G   EA+ LL +  E G   N  ++N +    CKEG P + + LL  M KRN L
Sbjct: 574 DGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVL 633

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P  ++YSTL++G  K    + AV++F  MV+ G        N     + M  +     + 
Sbjct: 634 PSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGIT-----FNIATYTILMSIFSHSHKMH 688

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +AY +F++M ++    D  +Y  +I      ++  +A          G  P  IT+  +I
Sbjct: 689 EAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCII 748

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
              C   +ID A  +   M   + IP   +Y +LI    +      A  LY     +GV+
Sbjct: 749 DGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVL 808

Query: 473 P 473
           P
Sbjct: 809 P 809



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 193/390 (49%), Gaps = 10/390 (2%)

Query: 90  DLLMALVMLNEQ-ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           D+L+++   N   E A+  FS A   GL P+  T + +++C    N     R+V + + D
Sbjct: 251 DVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKD 310

Query: 149 NGYHPNVTTFTILVNSLCK----SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            G  PN+ T+TI++N  C        +++A  +L ++ R G KP + TY+  + GLC VG
Sbjct: 311 RGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVG 370

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            VE A  ++ N+       + +++  V+ GFCK G   EA+++L E    G+ P+V +++
Sbjct: 371 NVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYS 430

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L N +C +G  MK + L++ M+     P  +SY++L++GL K   ++ AV IF  +   
Sbjct: 431 ILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGAS 490

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             + D  +  +L+ G CM+       ++ A ++ E+M     V    +   +IR   K  
Sbjct: 491 SCKYDSTVYETLIDGFCMQG-----DMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLG 545

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             D+AL   +  +  G  P TI  N ++   C  G   +AL LL    EH    +  SY+
Sbjct: 546 LFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYN 605

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            +I KL +      A  L    LK+ V+P 
Sbjct: 606 AIIYKLCKEGYPERALELLPRMLKRNVLPS 635



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 193/412 (46%), Gaps = 9/412 (2%)

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           S L+  +D+F + K  G    +   N LL  LV  N  E   + F E    G +PN +T+
Sbjct: 261 SMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTY 320

Query: 124 SIMIRCYCN----KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           +IM+  YC+         +A  ++  ++ +G  P V T++  ++ LCK G ++ AL ++ 
Sbjct: 321 TIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIR 380

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
            +       N  ++N ++ G C  G V EA ++L  +K+ G+ PDVY+Y+ +++ FC  G
Sbjct: 381 NLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKG 440

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
              + ++L+ E     + P++V++ +L +G CK+      V +   +   +C  D   Y 
Sbjct: 441 DVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYE 500

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           TL++G    G +  A+ + +EM+            SL+RG     + +  L + A +VF 
Sbjct: 501 TLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRG-----YYKLGLFDQALEVFN 555

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            M +     D      ++    +     EAL  L    E G      ++N +I  LC EG
Sbjct: 556 AMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEG 615

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
             ++AL LL  M +   +PS  +Y  LI+   +      A  L+   +K G+
Sbjct: 616 YPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGI 667



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 162/348 (46%), Gaps = 5/348 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + L+  +DIF SI      +  + +  L+    M  + ++A+K   E     L P ++
Sbjct: 473 KKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAF 532

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +   +IR Y     F +A +V + M  +G  P+      +++  C++G  KEAL +L+  
Sbjct: 533 SCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDF 592

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   N  +YN ++  LC  G  E A E+L  +    + P V  Y+ ++ GF K    
Sbjct: 593 QEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNF 652

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+ L    ++ G+T N+ T+  L + +       +  G+ K MK+R    D+ISY+TL
Sbjct: 653 KRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTL 712

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G     +++ A ++F+EM R G   +      ++ G C     + + ++ A  VF+KM
Sbjct: 713 IVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFC-----KSNRIDLATWVFDKM 767

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            +   + D  TY ++I    K    D+A        + G +P  IT N
Sbjct: 768 NRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHN 815



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 121/254 (47%), Gaps = 1/254 (0%)

Query: 49  PRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     +D   +A   KE + + +  ++ G N +   +N ++  L      E A++ 
Sbjct: 564 PDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALEL 623

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
                   + P+   +S +I  +  +++F  A  +   M   G   N+ T+TIL++    
Sbjct: 624 LPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSH 683

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           S ++ EA  +  +M   G   +  +Y  L+ G C    +++A+ +   +  +G  P+V T
Sbjct: 684 SHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVIT 743

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           YT ++DGFCK  R + A  + ++     V P+VVT+  L + Y K G   +   L  +MK
Sbjct: 744 YTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMK 803

Query: 288 KRNCLPDKISYSTL 301
            +  LPD I+++ L
Sbjct: 804 DKGVLPDDITHNVL 817



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 121/275 (44%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K     + +++F+++ +DG        N +L         + A+    +   +G   N  
Sbjct: 543 KLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPH 602

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +I   C +     A +++  M      P+V  ++ L++   K    K A+ +  +M
Sbjct: 603 SYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRM 662

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            ++G   NI TY  L+    +  ++ EAY +   +K  GL  D  +YT ++ GFC     
Sbjct: 663 VKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREM 722

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  L  E    G +PNV+T+  + +G+CK         +   M + + +PD ++Y+ L
Sbjct: 723 KKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVL 782

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
           ++   K G    A  ++  M   G   D+   N L
Sbjct: 783 IDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 216/481 (44%), Gaps = 75/481 (15%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + E +   D ++K G    V  +N L    ++L     A K   +    GL P+  T
Sbjct: 319 AGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVT 378

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  +C   +  EA K+       G+  NV  + +L++ LCK GR++EAL + D+M 
Sbjct: 379 YTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEME 438

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEM-------------------LMNVKNDG--- 220
            +  +P+   Y+ L+ GLC  G V+ AY++                   L+ +  +G   
Sbjct: 439 TLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNIS 498

Query: 221 -------------LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
                        L  DV  Y  ++DG+ ++    EAM+L  + IERG+TP+VVTFNTL 
Sbjct: 499 EARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLI 558

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG+C+ G  M+   +L++++ +  +P  ++Y+TL+N   + G ++       EM      
Sbjct: 559 NGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVV 618

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                   L++GLC      ++ + ++ Q+ E M  K  + D  TY  +I+   KGK+  
Sbjct: 619 PTHVTYTVLIKGLC-----RQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEIT 673

Query: 388 EAL-----IHLHH-----------------------------AIEMGHIP-RTITFNNVI 412
           +AL     + LH+                             +IE  +I  + +T+  +I
Sbjct: 674 KALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTII 733

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           +A C +G++ KAL     M     + S   Y  +I +L +     +A   +   L +GV 
Sbjct: 734 KAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVT 793

Query: 473 P 473
           P
Sbjct: 794 P 794



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 200/436 (45%), Gaps = 37/436 (8%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+++ IK  G   S    + L+  L   ++ E A+ F  +++   + P+  + + ++  +
Sbjct: 223 DVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKF 281

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C       AR     M  NG   +  ++ IL++ LC +G + EAL   D M + G +P++
Sbjct: 282 CKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDV 341

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L KG   +G +  A +++  +   GL PD+ TYT ++ G C++G   EA++L  E
Sbjct: 342 VTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQE 401

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + RG   NV+ +N L +  CK G   + + L   M+     PD I YS L++GL K G 
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461

Query: 311 IRPAVSIFKEM---VRFGFEVDERMMNSLLRGLC-----------MKSWEEKDLLED--- 353
           ++ A  ++++M    +F     +R   ++L GL              +W   DL+ED   
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQR---AVLLGLFKNGNISEARNYFDTWTRMDLMEDVVL 518

Query: 354 ----------------AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
                           A Q++ KM ++       T+  +I    +     EA   L    
Sbjct: 519 YNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIR 578

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             G +P  +T+  ++ A C  G + +    L  M  +A +P+  +Y +LI  L +  K +
Sbjct: 579 LKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMH 638

Query: 458 DACALYGAALKQGVIP 473
           ++  L      +G++P
Sbjct: 639 ESLQLLEYMYAKGLLP 654



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 180/398 (45%), Gaps = 5/398 (1%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K+G       +N LL  L +    + A+ F  +   +G+ P+  T++ + + +       
Sbjct: 299 KNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMS 358

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
            ARKV+  M   G +P++ T+T L+   C+ G ++EAL++  +    G K N+  YN LL
Sbjct: 359 GARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLL 418

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
             LC VGR+EEA  +   ++   L+PD   Y+ ++ G CK G    A +L  +   +   
Sbjct: 419 SCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKF 478

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+      +  G  K G   +         + + + D + Y+ +++G ++   I  A+ +
Sbjct: 479 PHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQL 538

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           + +M+  G        N+L+ G C +     DL+E A ++ E +  K  V    TY  ++
Sbjct: 539 YYKMIERGITPSVVTFNTLINGFCRRG----DLME-ARKMLEVIRLKGLVPSVVTYTTLM 593

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               +     E    LH       +P  +T+  +I+ LC + K+ ++L LL  MY    +
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLL 653

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           P   +Y+ +I    + ++   A  LY   L     P +
Sbjct: 654 PDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQ 691



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 158/341 (46%), Gaps = 7/341 (2%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFV--DRIKASPLKERIDIFDSIKKDGTNWSVSDFN 89
           F   +    E + LK       AQR V     K   + E  + FD+  +      V  +N
Sbjct: 461 FVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYN 520

Query: 90  DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
            ++   V L+    A++ + +    G+ P+  TF+ +I  +C + D  EARK+++ +   
Sbjct: 521 IMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLK 580

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G  P+V T+T L+N+ C+ G ++E    L +M      P   TY  L+KGLC   ++ E+
Sbjct: 581 GLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHES 640

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            ++L  +   GL PD  TY  ++  FCK     +A++L N  +     P  VT+  L N 
Sbjct: 641 LQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINA 700

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            C  G       ++  ++ RN    K++Y T++      G++  A+  F +M+  GF + 
Sbjct: 701 LCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVIS 760

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
            R  ++++  LC     ++ L+ +A   F  M  +    DP
Sbjct: 761 IRDYSAVINRLC-----KRGLITEAKYFFVMMLSEGVTPDP 796


>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
 gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 185/376 (49%), Gaps = 10/376 (2%)

Query: 104 AVKFFSEASSY-GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
           A++FF     +   A ++ +F   I       D+     ++  M      P+  TF I+ 
Sbjct: 95  ALQFFKHLEYHPSYAHSASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIA 154

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
                +G+   A++V   M   GC  ++ ++N +L  LC   RVE AY  L  V     K
Sbjct: 155 ERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFK 214

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
            DV +Y  + +G+C + R+ +A+E+L E +ERG+TP + T+N L  GY + G   +    
Sbjct: 215 ADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEF 274

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
              MK+R    D ++Y+T+++G    G+I+ A  +F EMV  G        N++++ LC 
Sbjct: 275 FLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLC- 333

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
               +KD +E+A  +FE+M KK  V +  TY +VIR L      D+A+  +      G  
Sbjct: 334 ----KKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCE 389

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD---A 459
           P   T+N  I+  C  G ++K  L +F       +P+  +Y++LI+ +   +KS D   A
Sbjct: 390 PNVQTYNVAIRYFCDAGDVEKG-LSMFEKMGQGSLPNLDTYNVLISAMFVRKKSEDLVVA 448

Query: 460 CALYGAALKQGVIPQR 475
             L    + +G IP++
Sbjct: 449 GKLLLEMVDRGFIPRK 464



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 179/394 (45%), Gaps = 22/394 (5%)

Query: 63  ASPLKERIDIFDSIKKDGTNW-------------SVSDFNDLLMALVMLNEQETAVKFFS 109
           AS     IDI   ++   T W             S   F  +    V   + + A+K F 
Sbjct: 112 ASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFL 171

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
               +G   +  +F+ ++   C       A   +  +    +  +V ++ I+ N  C   
Sbjct: 172 SMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIK 231

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           R  +ALEVL +M   G  P I TYN LLKG    G+++EA+E  + +K   ++ DV TYT
Sbjct: 232 RTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYT 291

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++ GF  VG    A ++ NE +  G+ P+  T+N +    CK+ +    V + + M K+
Sbjct: 292 TMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKK 351

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
             +P+  +Y+ ++ GL   G +  A+   + M   G E + +  N  +R  C     EK 
Sbjct: 352 GYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKG 411

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM---GHIPRTI 406
           L      +FEKM +  S+ +  TY ++I  +   KK+++ ++     +EM   G IPR  
Sbjct: 412 L-----SMFEKMGQG-SLPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKF 465

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
           TFN V+  L   G    A  +L L  +  ++P +
Sbjct: 466 TFNRVLNGLLLTGNQAFAKEILRLQSKCGRLPRQ 499



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 119/237 (50%), Gaps = 4/237 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  LKE  + F  +K+      V  +  ++    ++ E + A K F+E    G+ P++ 
Sbjct: 264 RAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTA 323

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ MI+  C K+    A  + + M   GY PN+TT+ +++  L  +G + +A+E +++M
Sbjct: 324 TYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERM 383

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC+PN+QTYN  ++  C  G VE+   M   +    L P++ TY  ++       +S
Sbjct: 384 KTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGSL-PNLDTYNVLISAMFVRKKS 442

Query: 242 NE---AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
            +   A +LL E ++RG  P   TFN + NG    G       +L+L  K   LP +
Sbjct: 443 EDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKCGRLPRQ 499


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 206/410 (50%), Gaps = 13/410 (3%)

Query: 73  FDSIKKDGT---NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           F++ K+ G      S      L++AL+  N        + E     + PN +TF+++I  
Sbjct: 173 FEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINA 232

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK---SGRLKEALEVLDQMGRIGC 186
            C      +AR V++ M   G  PNV ++  L++  CK   +G++ +A  VL +M     
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV 292

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN+ T+N L+ G      +  + ++   + +  +KP+V +Y ++++G C  G+ +EA+ 
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           + ++ +  GV PN++T+N L NG+CK     + + +   +K +  +P    Y+ L++   
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K GKI    ++ +EM R G   D    N L+ GLC         +E A ++F+++T K  
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN-----IEAAKKLFDQLTSK-G 466

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           + D  T+ I++    +  ++ +A + L    +MG  PR +T+N V++  C EG +  A  
Sbjct: 467 LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526

Query: 427 LLFLMYEHAKIP-SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +   M +  ++  +  SY++L+    Q  K  DA  L    L++G++P R
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 2/266 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   + +F  +       +V  +N L+  L    +   A+    +  S G+ PN  
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C  +   EA  +   +   G  P    + +L+++ CK G++ +   + ++M
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  P++ TYNCL+ GLC  G +E A ++   + + GL PD+ T+  +M+G+C+ G S
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGES 486

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI-SYST 300
            +A  LL E  + G+ P  +T+N +  GYCKEG       +   M+K   L   + SY+ 
Sbjct: 487 RKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGF 326
           LL G  + GK+  A  +  EM+  G 
Sbjct: 547 LLQGYSQKGKLEDANMLLNEMLEKGL 572



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 139/297 (46%), Gaps = 14/297 (4%)

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR---VEEAYEMLMNV 216
           +LV +   + R +   E   + G  G K +  +   L+  L    R   VE  Y+ ++  
Sbjct: 158 MLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRR 217

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK---E 273
           K   ++P+V+T+  V++  CK G+ N+A +++ +    G +PNVV++NTL +GYCK    
Sbjct: 218 K---IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGN 274

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   K   +LK M + +  P+  +++ L++G  K   +  ++ +FKEM+    + +    
Sbjct: 275 GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           NSL+ GLC         + +A  + +KM       +  TY  +I    K     EAL   
Sbjct: 335 NSLINGLC-----NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                 G +P T  +N +I A C  GKID    L   M     +P   +Y+ LI  L
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 8/272 (2%)

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R E  +E        G K    +   +M    K  RS +   +  E I R + PNV TFN
Sbjct: 168 RFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFN 227

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG---KIRPAVSIFKEM 321
            + N  CK G   K   +++ MK   C P+ +SY+TL++G  K G   K+  A ++ KEM
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           V      +    N L+ G     W++ D L  + +VF++M  +    +  +Y  +I  L 
Sbjct: 288 VENDVSPNLTTFNILIDGF----WKD-DNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC 342

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
            G K  EA+      +  G  P  IT+N +I   C    + +AL +   +     +P+  
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            Y+MLI    +L K  D  AL     ++G++P
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 2/159 (1%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           + ++++G    V  +N L+  L      E A K F + +S GL P+  TF I++  YC K
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRK 483

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR-IGCKPNIQT 192
            +  +A  ++  M   G  P   T+ I++   CK G LK A  +  QM +    + N+ +
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS 543

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
           YN LL+G    G++E+A  +L  +   GL P+  TY  V
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 2/146 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD +   G    V+ F+ L+       E   A     E S  GL P   T++I+++ YC
Sbjct: 458 LFDQLTSKGLPDLVT-FHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516

Query: 132 NKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
            + +   A  +   M  +     NV ++ +L+    + G+L++A  +L++M   G  PN 
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNV 216
            TY  + + +   G V +    L NV
Sbjct: 577 ITYEIVKEEMVDQGFVPDIEGHLFNV 602


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 201/435 (46%), Gaps = 6/435 (1%)

Query: 41  ESLDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E +D+   P  +     +D  +K   L+    + D +  DG   +V  +N LL  L    
Sbjct: 219 EMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTG 278

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
             +       E +S+ + P+ +T+SI+        +      +       G      T +
Sbjct: 279 RMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCS 338

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           IL+N LCK G++ +A +V + +   G  P    YN L+ G C V  +  A+ +   +K+ 
Sbjct: 339 ILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            ++PD  TY A+++G CK+    +A +L+ E  + GV P+V TFNTL + Y   G   K 
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             +L  M+++    D IS+ +++    K GKI  AV+I  +M+      + ++ NS++  
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSII-- 516

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
               ++ E    E A  + EKM          TY ++++ L +  + DEA   ++     
Sbjct: 517 ---DAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 573

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P  +++N +I A C +G  DKAL LL  M ++   P+  +   L++ L    + +D 
Sbjct: 574 GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDM 633

Query: 460 CALYGAALKQGVIPQ 474
             LY   L + V P 
Sbjct: 634 ECLYQQMLHKNVEPS 648



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 187/418 (44%), Gaps = 32/418 (7%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEA--SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           +N ++ A V   + + A+        S     P++++++++I          +A KV D 
Sbjct: 160 WNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDE 219

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M D G  PN  T+  +++   K G L+    + DQM   G KPN+ TYN LL GLC  GR
Sbjct: 220 MVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGR 279

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++E   ++  + +  + PD +TY+ + DG  + G S   + L  E++++GV     T + 
Sbjct: 280 MDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSI 339

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L NG CK+G   K   + +++     +P  + Y+TL+NG  +   +R A  IF++M    
Sbjct: 340 LLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399

Query: 326 FEVDERMMNSLLRGLC------------------------------MKSWEEKDLLEDAY 355
              D    N+L+ GLC                              + ++     LE  +
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            V   M +K   +D  ++G V++   K  K  EA+  L   I     P    +N++I A 
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              G  ++ALLL+  M       S  +Y++L+  L +  +  +A  L      QG+ P
Sbjct: 520 IESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRP 577



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 183/397 (46%), Gaps = 10/397 (2%)

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           S+  DG  +S+     L   L    E +T +  F+E+   G+   ++T SI++   C   
Sbjct: 294 SMLPDGFTYSI-----LFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG 348

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
              +A++V + +   G  P    +  L+N  C+   L+ A  + +QM     +P+  TYN
Sbjct: 349 KVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 408

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            L+ GLC +  V +A +++M ++  G+ P V T+  ++D +   G+  +   +L++  ++
Sbjct: 409 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 468

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           G+  +V++F ++   +CK G   + V +L  M  ++  P+   Y+++++  ++ G    A
Sbjct: 469 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQA 528

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           + + ++M   G        N LL+GLC  S      +++A ++   +  +    D  +Y 
Sbjct: 529 LLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ-----IDEAEELIYTLRNQGLRPDVVSYN 583

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            +I        TD+AL  L    + G  P   T + ++ AL   G++     L   M   
Sbjct: 584 TIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHK 643

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
              PS + Y +++    + E      +L     ++G+
Sbjct: 644 NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 128/260 (49%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+   ++K G + SV  FN L+ A     + E      S+    G+  +  +F  +++ +
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 484

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C      EA  ++D M      PN   +  ++++  +SG  ++AL ++++M   G   +I
Sbjct: 485 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASI 544

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN LLKGLC   +++EA E++  ++N GL+PDV +Y  ++   C  G +++A+ELL E
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             + G+ P + T +TL +     G       L + M  +N  P    Y  +++  ++   
Sbjct: 605 MNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 664

Query: 311 IRPAVSIFKEMVRFGFEVDE 330
                S+ KEM   G   D+
Sbjct: 665 DSKVASLKKEMSEKGIAFDD 684



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/306 (21%), Positives = 146/306 (47%), Gaps = 5/306 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ +   G   +   +N L+     + +   A   F +  S  + P+  T++ +I   C
Sbjct: 356 VFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLC 415

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A  ++  M  +G  P+V TF  L+++   +G+L++   VL  M + G K ++ 
Sbjct: 416 KLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVI 475

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           ++  ++K  C  G++ EA  +L ++    + P+   Y +++D + + G + +A+ L+ + 
Sbjct: 476 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKM 535

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              GV+ ++VT+N L  G C+     +   L+  ++ +   PD +SY+T+++     G  
Sbjct: 536 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 595

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ + +EM ++G     R  ++L+  L          + D   ++++M  K       
Sbjct: 596 DKALELLQEMNKYGIRPTLRTCHTLVSALASAGR-----VHDMECLYQQMLHKNVEPSSS 650

Query: 372 TYGIVI 377
            YGI++
Sbjct: 651 IYGIMV 656



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/228 (20%), Positives = 106/228 (46%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L++   +   +++ G    V  F  ++ A     +   AV    +     +APN+  
Sbjct: 452 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  Y    D  +A  +++ M ++G   ++ T+ +L+  LC+S ++ EA E++  + 
Sbjct: 512 YNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 571

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G +P++ +YN ++   C  G  ++A E+L  +   G++P + T   ++      GR +
Sbjct: 572 NQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVH 631

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           +   L  + + + V P+   +  + + Y +     K   L K M ++ 
Sbjct: 632 DMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/196 (19%), Positives = 95/196 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + I D +       +   +N ++ A +   + E A+    +  + G++ +  
Sbjct: 486 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIV 545

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++++  C  +   EA ++I  + + G  P+V ++  ++++ C  G   +ALE+L +M
Sbjct: 546 TYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 605

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G +P ++T + L+  L   GRV +   +   + +  ++P    Y  ++D + +    
Sbjct: 606 NKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEND 665

Query: 242 NEAMELLNEAIERGVT 257
           ++   L  E  E+G+ 
Sbjct: 666 SKVASLKKEMSEKGIA 681



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 67/137 (48%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I++   ++ + + + +K  G + S+  +N LL  L   ++ + A +      + GL P+ 
Sbjct: 520 IESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++ +I   CNK D  +A +++  M   G  P + T   LV++L  +GR+ +   +  Q
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQ 639

Query: 181 MGRIGCKPNIQTYNCLL 197
           M     +P+   Y  ++
Sbjct: 640 MLHKNVEPSSSIYGIMV 656



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM--YEHAKIPSRTSYDMLITKLDQLE 454
           +  G  P T  +N V+QA    G +D AL +L  M   E A  P   SY+++I  L +  
Sbjct: 149 VAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSG 208

Query: 455 KSYDACALYGAALKQGVIPQR 475
           K  DA  ++   +  GV P R
Sbjct: 209 KGSDALKVFDEMVDMGVAPNR 229


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 190/389 (48%), Gaps = 5/389 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E  +IF  +  +G    +  +  L+ AL    + E A + F +  + G  P+  
Sbjct: 274 RAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQV 333

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  ++  + +  D    ++    M  +GY P+V TFTILV+ LCK+    EA    D M
Sbjct: 334 IYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM 393

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  PN+ TYN L+ GL   GR+E+A ++L  +++ G++P  YTY   +D F K G +
Sbjct: 394 RKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGET 453

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+E   +   +G+ PN+V  N       + G   +   +   +++    PD ++Y+ +
Sbjct: 454 GKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMM 513

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +    K G++  AV++  EM+R G E D  ++NSL+      S  +   +++A+Q+F++M
Sbjct: 514 MKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI-----DSLYKAGRVDEAWQMFDRM 568

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                     TY  ++  LGK  +  +A+      I     P TI+FN ++   C   ++
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEV 628

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           + AL +   M      P   +Y+ +I  L
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVIYGL 657



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 195/413 (47%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I++    E ++++  +  +G   S+  ++ L++AL    + E  +    E    GL PN 
Sbjct: 203 IQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNV 262

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +TF+I IR         EA ++   M D G  P++ T+T+L+++LC +G+L+ A E+  +
Sbjct: 263 YTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVK 322

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G KP+   Y  LL      G ++   E    ++ DG  PDV T+T ++D  CK   
Sbjct: 323 MKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARD 382

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA    +   ++G+ PN+ T+NTL  G  + G     + LL  M+     P   +Y T
Sbjct: 383 FDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYIT 442

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
            ++   K G+   AV  F++M   G   +    N+ L  L      E   L +A  +F  
Sbjct: 443 FIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLA-----EMGRLREAKTMFNG 497

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           + +     D  TY ++++   K  + DEA+  L   I  G  P  I  N++I +L   G+
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +D+A  +   M +    P+  +Y+ L++ L +  +   A  L+ + + +   P
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSP 610



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 146/304 (48%), Gaps = 5/304 (1%)

Query: 71   DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
            D+F  +K  G       FN LL       +     + + E  S    P++ T++I+I   
Sbjct: 809  DLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSL 868

Query: 131  CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
               N+  +A      +  + + P   T+  L++ L K GRL+EA+ + ++M   GCKPN 
Sbjct: 869  AKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNC 928

Query: 191  QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
              +N L+ G   +G  E A ++   + N+G++PD+ +YT ++D  C  GR +EA+   NE
Sbjct: 929  AIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNE 988

Query: 251  AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
                G+ P+ + +N + NG  K     + + L   M+ R  +PD  +Y++L+  L   G 
Sbjct: 989  LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048

Query: 311  IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
            +  A  +++E+   G E D    N+L+RG  +    E      AY V++ M       + 
Sbjct: 1049 VEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEH-----AYTVYKNMMVDGCNPNI 1103

Query: 371  GTYG 374
            GTY 
Sbjct: 1104 GTYA 1107



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 149/311 (47%), Gaps = 12/311 (3%)

Query: 161  LVNSLCKSGRLKEALEVLDQMGR-IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            LV  LCK  R   A ++ D+  + +G  P + +YNCL+  L  V   E+A+++  ++KN 
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 220  GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            G  PD +T+  ++    K G+  E  EL  E I R   P+ +T+N + +   K     K 
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877

Query: 280  VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
            +     +   +  P   +Y  L++GL K G++  A+ +F+EM  +G + +  + N L+ G
Sbjct: 878  LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937

Query: 340  LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
                 + +    E A Q+F++M  +    D  +Y I++  L    + DEAL + +     
Sbjct: 938  -----YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992

Query: 400  GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL------DQL 453
            G  P  I +N +I  L    ++++AL L   M     +P   +Y+ L+  L      +Q 
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 454  EKSYDACALYG 464
            ++ Y+   L G
Sbjct: 1053 KRMYEELQLAG 1063



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 118/242 (48%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K++ L + +D F  +       +   +  L+  L  +   E A++ F E S YG  PN  
Sbjct: 870  KSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCA 929

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
             F+I+I  Y    D   A ++   M + G  P++ ++TILV+ LC +GR+ EAL   +++
Sbjct: 930  IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               G  P+   YN ++ GL    R+EEA  +   ++N G+ PD+YTY ++M      G  
Sbjct: 990  KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             +A  +  E    G+ P+V T+N L  GY     P     + K M    C P+  +Y+ L
Sbjct: 1050 EQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109

Query: 302  LN 303
             N
Sbjct: 1110 PN 1111



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/498 (22%), Positives = 196/498 (39%), Gaps = 79/498 (15%)

Query: 49   PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
            P  +     +D + KA  + E   +FD +K    + +V  +N LL  L      + A++ 
Sbjct: 540  PDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 599

Query: 108  FSEASSYGLAPNSWTFSIMIRCYCNKND-------FFEARKVIDCMFD------------ 148
            F        +PN+ +F+ ++ C+C KND        F    V+DC  D            
Sbjct: 600  FESMIXKKCSPNTISFNTLLDCFC-KNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLI 658

Query: 149  ----------------NGYHPNVTTFTILVNSLCKSGRLKEALEVL-DQMGRIGCKPNIQ 191
                               HP+  T   L+  L K G++ +A+ +  D M ++  + N  
Sbjct: 659  KENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRS 718

Query: 192  TYNCLLKG-----------------------------------LCYVGRVEEAYEMLMN- 215
             +  L+ G                                   LC   R   AY++    
Sbjct: 719  FWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKF 778

Query: 216  VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
             K  G+ P + +Y  ++    +V  + +A +L  +    G  P+  TFN L   + K G 
Sbjct: 779  TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGK 838

Query: 276  PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
              +   L K M  R C PD I+Y+ +++ L K   +  A+  F ++V   F    R    
Sbjct: 839  ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898

Query: 336  LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
            L+ GL      +   LE+A ++FE+M+      +   + I+I   GK   T+ A      
Sbjct: 899  LIDGLA-----KVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 396  AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
             +  G  P   ++  ++  LC  G++D+AL     +      P   +Y+ +I  L + ++
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 456  SYDACALYGAALKQGVIP 473
              +A ALY     +G++P
Sbjct: 1014 MEEALALYNEMRNRGIVP 1031



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/452 (22%), Positives = 189/452 (41%), Gaps = 43/452 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +++   + ++G    V   N L+ +L      + A + F       L+P   
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++     +    +A ++ + M      PN  +F  L++  CK+  ++ AL++  +M
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM 638

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             + CKP++ TYN ++ GL    +V  A+     +K   + PD  T   ++ G  K G+ 
Sbjct: 639 TVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQI 697

Query: 242 NEAM--------------------ELLNEAIERGVTPNVVTF--NTLFNGYCKEGT---P 276
            +A+                    +L+   +        + F    + NG C+E +   P
Sbjct: 698 GDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIP 757

Query: 277 MKGV------------GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           +  V               K  KK    P   SY+ L+  LL+      A  +FK+M   
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D    N LL  +  KS +  +L E    ++++M  +    D  TY IVI +L K  
Sbjct: 818 GCAPDAFTFNMLL-AVHGKSGKITELFE----LYKEMISRRCKPDAITYNIVISSLAKSN 872

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             D+AL   +  +     P   T+  +I  L   G++++A+ L   M ++   P+   ++
Sbjct: 873 NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           +LI    ++  +  AC L+   + +G+ P  K
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLK 964



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 146/320 (45%), Gaps = 5/320 (1%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           ++ T+  +  +L   G L++   VL++M + G   N  +YN L+  L   G   EA E+ 
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVY 215

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             + ++GLKP + TY+A+M    K   S   M LL E  + G+ PNV TF        + 
Sbjct: 216 RRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRA 275

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +   + + M    C PD ++Y+ L++ L   G++  A  +F +M   G + D+ + 
Sbjct: 276 GKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIY 335

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            +LL       + +   L+   + + +M     + D  T+ I++  L K +  DEA    
Sbjct: 336 ITLL-----DKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
               + G +P   T+N +I  L   G+I+ AL LL  M      P+  +Y   I    + 
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKS 450

Query: 454 EKSYDACALYGAALKQGVIP 473
            ++  A   +     +G++P
Sbjct: 451 GETGKAVETFEKMKAKGIVP 470


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 180/390 (46%), Gaps = 15/390 (3%)

Query: 88  FNDLLMALV---MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
            N  LMAL    ML + E+   F S       A N  T++ +I  YC   D   +++ + 
Sbjct: 44  LNAFLMALARHRMLADMES---FASRMP----ARNLRTYTTLINAYCLAGDLPASKRHLS 96

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   G+ P+   +T  V   C++G L  A  +   M   GC     TY  LL GLC  G
Sbjct: 97  SLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAG 156

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            V EA  +   ++ DG  PD + Y  ++ G C  GR+ EA  LL++A+  G  PNVV +N
Sbjct: 157 MVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYN 216

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +GYC  G     V + + M    C P+  +Y+ L++G  K  K+  A+ +F  MV  
Sbjct: 217 ALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDA 276

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   +     +L++G C         L+ AY++ + M     V +  T  ++I  L K +
Sbjct: 277 GLVPNVVTYTALIQGQCSDGQ-----LDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHE 331

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           +  EA + L   I+ G     I + ++I  LC  G+   A  L+  +     +P   +Y 
Sbjct: 332 RVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYS 391

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            LI  L + ++  +A  +    +++GV P 
Sbjct: 392 SLIDGLCRQKELSEAMLVLDDMMEKGVQPS 421



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 189/394 (47%), Gaps = 5/394 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  ++E + +F  ++ DG       +  ++  L        A    S+A + G  PN   
Sbjct: 155 AGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVV 214

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  YCN  D   A  V + M  NG  PNV T+T L++  CKS +L  A+ +  +M 
Sbjct: 215 YNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV 274

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G  PN+ TY  L++G C  G+++ AY +L +++N GL P+ +T + ++D  CK  R  
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA  LL   I++G+  N + + +L +G CK G       L++ +  +  +PD  +YS+L+
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +GL +  ++  A+ +  +M+  G +        ++  L  +        + + ++ +KM 
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGA-----DGSKKILDKMI 449

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
                 D  TY I +R+     + ++A   + H ++ G  P  +T+N +I      G   
Sbjct: 450 AAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTS 509

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           +A      M  +   P+  SY +L+  L + E S
Sbjct: 510 QAFSTFKHMVANGCKPNEESYTVLLRLLIKKESS 543



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 192/419 (45%), Gaps = 5/419 (1%)

Query: 58  VDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA 117
           V   +A  L     +F  +   G   +   +  LL  L        A+  F+   + G A
Sbjct: 115 VGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCA 174

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+   ++ M+   C      EA  ++      G+ PNV  +  L++  C  G L+ A++V
Sbjct: 175 PDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDV 234

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
            ++M   GC PN++TY  L+ G C   +++ A  +   + + GL P+V TYTA++ G C 
Sbjct: 235 FERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCS 294

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G+ + A  LL      G+ PN  T + L +  CK     +   LL  + ++    ++I 
Sbjct: 295 DGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIV 354

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y++L++GL K G+   A  + + +V  GF  D    +SL+ GLC     +K+L E A  V
Sbjct: 355 YTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLC----RQKELSE-AMLV 409

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            + M +K     P TY I+I  L +    D +   L   I  G  P   T+   +++ C 
Sbjct: 410 LDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCH 469

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           EG+++ A  ++  M +H   P+  +Y+ LI     L  +  A + +   +  G  P  +
Sbjct: 470 EGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEE 528



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 198/425 (46%), Gaps = 21/425 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+  +D+F+ +  +G + +V  + +L+       + + A+  FS     GL PN  T++ 
Sbjct: 228 LELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTA 287

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+  C+      A +++  M ++G  PN  T ++L+++LCK  R+ EA  +L  + + G
Sbjct: 288 LIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKG 347

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            K N   Y  L+ GLC  GR   A  ++  + + G  PD +TY++++DG C+    +EAM
Sbjct: 348 IKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAM 407

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +L++ +E+GV P+ VT+  + +   +E        +L  M      PD  +Y+  +   
Sbjct: 408 LVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSY 467

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G++  A  +   MV  G   +    N+L+ G     +    L   A+  F+ M    
Sbjct: 468 CHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICG-----YANLGLTSQAFSTFKHMVANG 522

Query: 366 SVTDPGTYGIVIRTLGKGKKTD------------EALIHLHHAIEMG---HIPRTI-TFN 409
              +  +Y +++R L K + ++              + +LH  +E      +P  I  +N
Sbjct: 523 CKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYN 582

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
             + +LC   ++D+A +LL  M      PS   Y  +I    +L+   +A     + +K 
Sbjct: 583 CFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKS 642

Query: 470 GVIPQ 474
           G IPQ
Sbjct: 643 GYIPQ 647



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 183/443 (41%), Gaps = 60/443 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  L   + +F  +   G   +V  +  L+       + + A +      + GL PN W
Sbjct: 259 KSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEW 318

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T S++I   C      EA+ ++  +   G   N   +T L++ LCK+GR   A  ++  +
Sbjct: 319 TCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTL 378

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAY-----------------------EMLMNVKN 218
              G  P+  TY+ L+ GLC    + EA                        E++  V  
Sbjct: 379 VSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGA 438

Query: 219 D------------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           D            G+KPDV+TYT  +  +C  GR  +A  ++   ++ GV PN+VT+N L
Sbjct: 439 DGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNAL 498

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK--------------W--GK 310
             GY   G   +     K M    C P++ SY+ LL  L+K              W   +
Sbjct: 499 ICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAE 558

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           ++    + +EMV+     +  + N  L  LC       D L++A  +  +M         
Sbjct: 559 MKYLHGLLEEMVKLQLPSEIDIYNCFLTSLC-----RVDRLDEAKILLIEMQSANLTPSE 613

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             Y  +I    + K   EAL  +   ++ G+IP+  ++ ++I +LC EG I  A  +   
Sbjct: 614 DVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGD 673

Query: 431 M----YEHAKIPSRTSYDMLITK 449
           M    Y + +I  R   D L+ K
Sbjct: 674 MLSKEYNYEEIAWRILIDGLLQK 696



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 128/296 (43%), Gaps = 16/296 (5%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E + + D + + G   S   +  ++  LV     + + K   +  + G+ P+ +T++I
Sbjct: 403 LSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTI 462

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +R YC++    +A  ++  M D+G  PN+ T+  L+      G   +A      M   G
Sbjct: 463 FVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANG 522

Query: 186 CKPNIQTYNCLLKGLCY----------------VGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           CKPN ++Y  LL+ L                  +  ++  + +L  +    L  ++  Y 
Sbjct: 523 CKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYN 582

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
             +   C+V R +EA  LL E     +TP+   + ++    C+     + +  +  M K 
Sbjct: 583 CFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKS 642

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
             +P   SY  +++ L + G I+ A  +F +M+   +  +E     L+ GL  K +
Sbjct: 643 GYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGY 698



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/136 (21%), Positives = 61/136 (44%)

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C  +   EA+ ++  M      P+   +T ++   C+   L EAL  +D M + G  P +
Sbjct: 589 CRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQL 648

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           ++Y  ++  LC  G ++ A ++  ++ +     +   +  ++DG  + G   E   LL+ 
Sbjct: 649 ESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSV 708

Query: 251 AIERGVTPNVVTFNTL 266
             E+   P+   +  L
Sbjct: 709 MEEKNYRPSDALYARL 724


>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
 gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
          Length = 550

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 184/351 (52%), Gaps = 10/351 (2%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTI 160
           + AV   ++AS +G     + ++ ++     +    +A  + +    +G Y P+  +F +
Sbjct: 164 DAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNV 223

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           ++  +C+ G  ++ALE++++M   GC P+  T+N L+ GLC   +V   +++L  ++ DG
Sbjct: 224 VIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDG 283

Query: 221 L-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           +  P+V TYT+V+ G+CK GR  +A+ + N+ +E G  PN VT+N L NGY K       
Sbjct: 284 VCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESA 343

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           V + + +  R C PD +++S+L++G  + G++  A+ I+KEM +   + +    + ++  
Sbjct: 344 VRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHS 403

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAI 397
           LC     +++   +A     ++  +  +  P T  Y  VI  L KG + +EA + +    
Sbjct: 404 LC-----KQNRSAEALGFLRELNMRADIA-PQTFIYNPVIDILCKGGQVEEANLIVTDME 457

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           E G  P   T+  +I   C +G+I +A+ L   M E    P + + +  I+
Sbjct: 458 EKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFIS 508



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 196/409 (47%), Gaps = 36/409 (8%)

Query: 103 TAVKFFSEASSYGLA--PNSWTFSIMIRCYCNKNDFFEARKVIDCMFD-NGYHPNVTTFT 159
           +A++ FS   S  L+  P+  ++S +I   C      +A K+ D M D +GY P+   F+
Sbjct: 92  SALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFS 151

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            +  S   +G L  A+ +L +  + G +     YN LL  L   GR ++A  +  +   D
Sbjct: 152 FVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQD 211

Query: 220 GL-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           GL  PD +++  V+ G C+VG   +A+EL+    E G +P+ +T N L +G C+     +
Sbjct: 212 GLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNR 271

Query: 279 GVGLLKLMKKRN-CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG------------ 325
           G  LL+ +++   C+P+ ++Y+++++G  K G++  A+S++ +M+  G            
Sbjct: 272 GHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLI 331

Query: 326 --------FEVDERMMNSLLRGLC----------MKSWEEKDLLEDAYQVFEKMTKKVSV 367
                    E   RM   L+   C          +  +     L+DA +++++M +    
Sbjct: 332 NGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQ 391

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALL 426
            +  T+ I+I +L K  ++ EAL  L        I P+T  +N VI  LC  G++++A L
Sbjct: 392 PNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANL 451

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           ++  M E    P + +Y +LI       +  +A  L+   ++ G  P +
Sbjct: 452 IVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDK 500



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 175/392 (44%), Gaps = 53/392 (13%)

Query: 67  KERIDIFDSIKKDG----TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           ++ + +F+S  +DG      WS   FN ++  +  +   + A++     + +G +P++ T
Sbjct: 199 QDAVALFESWIQDGLYSPDGWS---FNVVIKGVCRVGNFQKALELVERMTEFGCSPDTIT 255

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGY-HPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +I++   C          ++  +  +G   PNV T+T +++  CK+GR+++AL V + M
Sbjct: 256 HNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDM 315

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +PN  TYN L+ G      +E A  M   +      PDV T+++++DG+C+ G+ 
Sbjct: 316 LESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQL 375

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYST 300
           ++AM +  E  +  + PNV TF+ + +  CK+    + +G L+ +  R +  P    Y+ 
Sbjct: 376 DDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNP 435

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++ L K G++  A  I  +M   G   D+     L+ G CMK                 
Sbjct: 436 VIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKG---------------- 479

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
                                   +  EA+   H  +E G  P  IT N+ I  +   G 
Sbjct: 480 ------------------------RIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGM 515

Query: 421 IDKALLLLFLMYEHA----KIPSRTSYDMLIT 448
            ++   ++ +   HA    K+PS  S  + I+
Sbjct: 516 PNEVDQIMLIASGHASASQKVPSHPSQRLDIS 547



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 113/216 (52%), Gaps = 1/216 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++ + +++ + + GT  +   +N L+       + E+AV+ + +       P+  
Sbjct: 301 KAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVV 360

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS +I  YC      +A ++   M  +   PNV TF+I+++SLCK  R  EAL  L ++
Sbjct: 361 TFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLREL 420

Query: 182 G-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             R    P    YN ++  LC  G+VEEA  ++ +++  G  PD YTYT ++ G C  GR
Sbjct: 421 NMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGR 480

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
             EA+ L ++ +E G  P+ +T N+  +   K G P
Sbjct: 481 IPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMP 516


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 196/413 (47%), Gaps = 5/413 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   +F+ +K  G    +  +N L+       +   A ++FSE  + GL PN  
Sbjct: 277 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 336

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  +C +     A K++  M   G  PN  T+T L+++ CK+G L EA ++L+ M
Sbjct: 337 TYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 396

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G K NI TY  LL GLC  GR+ EA E+  ++  DG+ P+   YTA++ G+ K  R 
Sbjct: 397 LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERM 456

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +AM++L +  E  + P+++ + ++  G+C +    +   +L+ MK R    + +  +T+
Sbjct: 457 EDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI 516

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++   K GK   A++ F+EM   G E        L+ GLC     E  ++E A   F +M
Sbjct: 517 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC-----EAGIVELAVDYFCRM 571

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  +   Y  +I  L      + A          G  P    F  +I      G +
Sbjct: 572 LSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNL 631

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            +AL+L+  M E A       Y  L++   Q  + + A   +   +++G++P+
Sbjct: 632 QEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE 684



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 177/345 (51%), Gaps = 5/345 (1%)

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           KFF++    G+AP+ +T+++MI   C + D   +R++   M + G  P+V T+  L++  
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
            K G L+E   + ++M  +GC P+I TYN L+   C   ++  A+E    +KN+GLKP+V
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            TY+ ++D FCK G    A++LL +    G+ PN  T+ +L +  CK G   +   LL  
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M +     + ++Y+ LL+GL K G++  A  +F+ M++ G   ++++  +L+ G     +
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG-----Y 450

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            + + +EDA ++ ++MT+     D   YG +I      +K +E  + L      G     
Sbjct: 451 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 510

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +    +I A    GK   AL     M +     +  +Y +LI  L
Sbjct: 511 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGL 555



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 178/386 (46%), Gaps = 5/386 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+    +F  +++ G +  V  +N L+     +   E     F+E    G  P+  
Sbjct: 242 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 301

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I CYC       A +    M +NG  PNV T++ L+++ CK G ++ A+++L  M
Sbjct: 302 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDM 361

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  PN  TY  L+   C  G + EA+++L ++   G+K ++ TYTA++DG CK GR 
Sbjct: 362 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRM 421

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA E+    ++ G++PN   +  L +GY K       + +LK M + N  PD I Y ++
Sbjct: 422 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI 481

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G     K+     I +EM   G        N ++    + ++ +     DA   F++M
Sbjct: 482 IWGHCSQRKLEETKLILEEMKSRGISA-----NPVISTTIIDAYFKAGKSSDALNFFQEM 536

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                     TY ++I  L +    + A+ +    + +G  P    + ++I  LC    I
Sbjct: 537 QDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCI 596

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI 447
           + A  L   M      P  T++  LI
Sbjct: 597 ESAKKLFDEMQCRGMTPDITAFTALI 622



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 184/385 (47%), Gaps = 26/385 (6%)

Query: 59  DRIKASPLKERID-------IFDSIKKDGTNWSVSD--------FNDLLMALVMLNEQET 103
           D +K   +  R+D       IFD +      WS  +        F+ L    V L   E 
Sbjct: 125 DTVKEVIMNSRMDMGFPVCNIFDML------WSTRNICVSGSGVFDVLFSVFVELGLLEE 178

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A + FS   ++   P + + + ++       +    RK  + M   G  P+V T+ ++++
Sbjct: 179 ANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMID 238

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK G L+ +  +  QM  +G  P++ TYN L+ G   VG +EE   +   +K+ G  P
Sbjct: 239 YLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVP 298

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D+ TY  +++ +CK  +   A E  +E    G+ PNVVT++TL + +CKEG     + LL
Sbjct: 299 DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLL 358

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M++   LP++ +Y++L++   K G +  A  +  +M++ G +++     +LL GLC  
Sbjct: 359 XDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLC-- 416

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   + +A +VF  M K     +   Y  ++    K ++ ++A+  L    E    P
Sbjct: 417 ---KAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP 473

Query: 404 RTITFNNVIQALCGEGKIDKALLLL 428
             I + ++I   C + K+++  L+L
Sbjct: 474 DLILYGSIIWGHCSQRKLEETKLIL 498



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 136/277 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E  ++F S+ KDG + +   +  L+   +     E A+K   + +   + P+  
Sbjct: 417 KAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLI 476

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  +I  +C++    E + +++ M   G   N    T ++++  K+G+  +AL    +M
Sbjct: 477 LYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEM 536

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G +  I TY  L+ GLC  G VE A +    + + GL+P+V  YT+++DG C     
Sbjct: 537 QDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCI 596

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A +L +E   RG+TP++  F  L +G  K G   + + L+  M +     D   Y++L
Sbjct: 597 ESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSL 656

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
           ++G  + G++  A   F EM+  G   +E +   LLR
Sbjct: 657 VSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 693



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 123/291 (42%), Gaps = 5/291 (1%)

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C      ++ L      +G +EEA E    ++N    P   +   ++    K G      
Sbjct: 156 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 215

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +  N+ I  G+ P+V T+N + +  CKEG       L   M++    PD ++Y++L++G 
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +    S+F EM   G   D    N L+   C     + + +  A++ F +M    
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYC-----KFEKMPRAFEYFSEMKNNG 330

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY  +I    K      A+  L      G +P   T+ ++I A C  G + +A 
Sbjct: 331 LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 390

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            LL  M +     +  +Y  L+  L +  +  +A  ++ + LK G+ P ++
Sbjct: 391 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 441


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 200/444 (45%), Gaps = 42/444 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E  +++  +KKDG   SV+  N  L +LV     E  ++ FSE    GL P+ + +  
Sbjct: 128 VSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGK 187

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            I+      D   A +++ CM   G  P V  + +++  LCK  R+K+A ++ D+M    
Sbjct: 188 AIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRR 247

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TYN L+ G C VG++EEA+ +   +K + ++P + T+ ++++G C+     EA 
Sbjct: 248 VAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQ 307

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGY----------------------------------- 270
            +L E    G  P+  T+ TLF+G+                                   
Sbjct: 308 RVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNAL 367

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CKEG   K   +LK   +    P  + ++T++NG  + G I  A +  ++M   G   + 
Sbjct: 368 CKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNH 427

Query: 331 RMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
              NSL++  C MK+ EE      A +  +KM +K  + +  TY  +I   G+    D  
Sbjct: 428 VTYNSLVKKFCEMKNMEE------AEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRC 481

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
              L    + G  P  I++  +I  LC +  I +A ++L  M     +P+   Y+MLI  
Sbjct: 482 FQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDG 541

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
                K  DA   +   + + ++P
Sbjct: 542 SCIAGKLKDAFRFFDEMVAREIVP 565



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 195/440 (44%), Gaps = 40/440 (9%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           ++ + +F  I + G       +   + A V L + + A++  +     G++P  + ++++
Sbjct: 164 EDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVV 223

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I   C +    +A K+ D M D    PN  T+  L++  CK G+L+EA  + ++M     
Sbjct: 224 IGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENV 283

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG------------ 234
           +P I T+N LL GLC    +EEA  +L  ++  G  PD +TYT + DG            
Sbjct: 284 EPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASIT 343

Query: 235 -----------------------FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
                                   CK G   +A E+L + +E G+ P  V FNT+ NGYC
Sbjct: 344 LSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYC 403

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           + G   K    ++ M+     P+ ++Y++L+    +   +  A    K+MV  G   +  
Sbjct: 404 QVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVE 463

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             N+L+ G     +    L +  +Q+ E+M KK    +  +YG +I  L K     EA +
Sbjct: 464 TYNTLIDG-----YGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEV 518

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            L   +  G +P    +N +I   C  GK+  A      M     +P+  +Y++LI  L 
Sbjct: 519 ILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLC 578

Query: 452 QLEKSYDACALYGAALKQGV 471
           +  K  +A  L     ++G+
Sbjct: 579 KKGKVMEAENLASEITRKGL 598



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 186/387 (48%), Gaps = 8/387 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN ++     + +   A     +  + GL PN  T++ +++ +C   +  EA K I  M 
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV 454

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  PNV T+  L++   +S       ++L++M + G KPN+ +Y CL+  LC    + 
Sbjct: 455 EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANIL 514

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  +L ++ + G+ P+   Y  ++DG C  G+  +A    +E + R + P +VT+N L 
Sbjct: 515 EAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILI 574

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG CK+G  M+   L   + ++    D I+Y++L++G    G ++ A+ +++ M + G +
Sbjct: 575 NGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIK 634

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 + L+ G C K  E   L+E  YQ   +M +   V D   Y  +I    +     
Sbjct: 635 PTLNTYHRLIAG-CGK--EGLVLVEKIYQ---EMLQMNLVPDRVIYNALIHCYVEHGDVQ 688

Query: 388 EALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           +A   LH A+E   I P  +T+N +I     EG++ K   L+  M     IP   +YD+L
Sbjct: 689 KA-CSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDIL 747

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I    +L+    A   Y    + G  P
Sbjct: 748 IVGHCKLKDFDGAYVWYREMFENGFTP 774



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 175/393 (44%), Gaps = 14/393 (3%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           LL AL      E A +   +    GLAP    F+ ++  YC   D  +A   I+ M   G
Sbjct: 363 LLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVG 422

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PN  T+  LV   C+   ++EA + + +M   G  PN++TYN L+ G       +  +
Sbjct: 423 LRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCF 482

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           ++L  ++  GLKP+V +Y  +++  CK     EA  +L + + RGV PN   +N L +G 
Sbjct: 483 QILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGS 542

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C  G           M  R  +P  ++Y+ L+NGL K GK+  A ++  E+ R G   D 
Sbjct: 543 CIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDV 602

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              NSL+ G     +     ++ A +++E M K        TY  +I   GK     E L
Sbjct: 603 ITYNSLISG-----YSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGK-----EGL 652

Query: 391 IHL----HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           + +       ++M  +P  + +N +I      G + KA  L   M      P + +Y+ L
Sbjct: 653 VLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCL 712

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           I    +  + +    L      +G+IP+ +  D
Sbjct: 713 ILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYD 745



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 155/341 (45%), Gaps = 10/341 (2%)

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           +   E    GL PN  ++  +I C C   +  EA  ++  M   G  PN   + +L++  
Sbjct: 483 QILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGS 542

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           C +G+LK+A    D+M      P + TYN L+ GLC  G+V EA  +   +   GL  DV
Sbjct: 543 CIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDV 602

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            TY +++ G+   G   +A+EL     + G+ P + T++ L  G  KEG  +    + + 
Sbjct: 603 ITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVE-KIYQE 661

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS- 344
           M + N +PD++ Y+ L++  ++ G ++ A S+   M   G + D+   N L+ G   +  
Sbjct: 662 MLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGR 721

Query: 345 -WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
             + K+L+ D       M  +  +    TY I+I    K K  D A +      E G  P
Sbjct: 722 MHKVKNLVND-------MKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTP 774

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
                +N+I  L  EG+   A ++   M    K   R   D
Sbjct: 775 SVSICDNLITGLREEGRSHDADVICSEMNMKGKDDCRADED 815



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 153/364 (42%), Gaps = 41/364 (11%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRL-KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
           +F     P    F+ ++ S+C   ++  E+ E+   M + G  P++ + N  L+ L    
Sbjct: 102 LFSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTK 161

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R E+  ++   +   GL+PD + Y   +    K+G    A+EL+      GV+P V  +N
Sbjct: 162 RYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYN 221

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            +  G CKE        L   M  R   P++I+Y+TL++G  K G++  A +I + M   
Sbjct: 222 VVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVE 281

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY----------- 373
             E      NSLL GLC        ++E+A +V E+M     V D  TY           
Sbjct: 282 NVEPTIITFNSLLNGLC-----RAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCG 336

Query: 374 ------------------------GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
                                    I++  L K    ++A   L   +E G  P  + FN
Sbjct: 337 NVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFN 396

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            ++   C  G I+KA   +  M      P+  +Y+ L+ K  +++   +A       +++
Sbjct: 397 TIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEK 456

Query: 470 GVIP 473
           GV+P
Sbjct: 457 GVLP 460



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 5/255 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+    +  + + A +FF E  +  + P   T++I+I   C K    EA  +   + 
Sbjct: 535 YNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEIT 594

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV- 206
             G   +V T+  L++    +G +++ALE+ + M + G KP + TY+ L+ G    G V 
Sbjct: 595 RKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVL 654

Query: 207 -EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            E+ Y+ ++ +    L PD   Y A++  + + G   +A  L +    +G+ P+ +T+N 
Sbjct: 655 VEKIYQEMLQM---NLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNC 711

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L  G+ KEG   K   L+  MK R  +P   +Y  L+ G  K      A   ++EM   G
Sbjct: 712 LILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENG 771

Query: 326 FEVDERMMNSLLRGL 340
           F     + ++L+ GL
Sbjct: 772 FTPSVSICDNLITGL 786



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 1/213 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  ++   I + G ++ V  +N L+         + A++ +      G+ P   
Sbjct: 579 KKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLN 638

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I   C K       K+   M      P+   +  L++   + G +++A  +   M
Sbjct: 639 TYHRLI-AGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAM 697

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P+  TYNCL+ G    GR+ +   ++ ++K  GL P   TY  ++ G CK+   
Sbjct: 698 EAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDF 757

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
           + A     E  E G TP+V   + L  G  +EG
Sbjct: 758 DGAYVWYREMFENGFTPSVSICDNLITGLREEG 790



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 92/198 (46%), Gaps = 11/198 (5%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMA-----LVMLNEQETAVKFFSEASSYGLA 117
           A  +++ +++++++KK G   +++ ++ L+       LV++       K + E     L 
Sbjct: 615 AGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVE------KIYQEMLQMNLV 668

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+   ++ +I CY    D  +A  +   M   G  P+  T+  L+    K GR+ +   +
Sbjct: 669 PDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNL 728

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           ++ M   G  P  +TY+ L+ G C +   + AY     +  +G  P V     ++ G  +
Sbjct: 729 VNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLRE 788

Query: 238 VGRSNEAMELLNEAIERG 255
            GRS++A  + +E   +G
Sbjct: 789 EGRSHDADVICSEMNMKG 806



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 20/227 (8%)

Query: 257 TPNVVTFNTLFNGYCKEGTPM-KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           TP    F+ +    C E   + +   L  LMKK   LP   S +  L  L+   +    +
Sbjct: 108 TPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTL 167

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT-KKVSVTDPGT-- 372
            +F E+V  G   D+ M          K+ +    L D  +  E MT  K     PG   
Sbjct: 168 QLFSEIVESGLRPDQFMYG--------KAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFV 219

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y +VI  L K K+  +A       ++    P  IT+N +I   C  G++++A    F + 
Sbjct: 220 YNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEA----FNIR 275

Query: 433 EHAKI----PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           E  K+    P+  +++ L+  L + +   +A  +       G +P R
Sbjct: 276 ERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDR 322


>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g04760, chloroplastic-like [Glycine max]
          Length = 531

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 189/374 (50%), Gaps = 9/374 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A +      + G +P+  T++I+I   C++     A +  + +    ++P V T+TIL+ 
Sbjct: 108 AYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIE 167

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +    G + EA+++LD+M  I  +P++  YN ++  +C  G V+ A+E++ ++ + G   
Sbjct: 168 ATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSKGYAL 226

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           DV TY  ++      G+     EL+++ + +G   NVVT++ L +  C++G   +GVGLL
Sbjct: 227 DVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLL 286

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           K MKK+   PD   Y  L+  L K G++  A+ +   M+  G   D    N++L  LC +
Sbjct: 287 KDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQ 346

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                   ++A  +FEK+ +     +  +Y  V   LG       AL  +   ++    P
Sbjct: 347 KRA-----DEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXVD-P 400

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAK--IPSRTSYDMLITKLDQLEKSYDACA 461
             I +N++I  LC +G +D+A+ LL  M   +    PS  SY++++  L ++ +  DA  
Sbjct: 401 DVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATE 460

Query: 462 LYGAALKQGVIPQR 475
           +  A + +G +P  
Sbjct: 461 VLAAMVDKGCLPNE 474



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 177/361 (49%), Gaps = 9/361 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   ++  + + K+  N +V  +  L+ A ++    + A+K   E     L P+ + ++ 
Sbjct: 140 LHAALEFKNQLLKENFNPTVVTYTILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNS 199

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C +     A +VI  +   GY  +V T+ IL+ SL   G+ +   E++  M   G
Sbjct: 200 IIX-MCREGYVDRAFEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKG 258

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C+ N+ TY+ L+  LC  G+VEE   +L ++K  GL+PD Y Y  ++   CK GR + A+
Sbjct: 259 CEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAI 318

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+L+  I  G  P++V +NT+    CK+    + + + + + +  C P+  SY+T+ + L
Sbjct: 319 EVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSAL 378

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              G    A+ +  EM+    + D    NSL+  LC        ++++A ++   M  + 
Sbjct: 379 GSSGHKVRALGMILEMLDX-VDPDVIAYNSLISCLC-----RDGMVDEAIELLVDMEMES 432

Query: 366 SVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           S   P   +Y IV+  L +  +  +A   L   ++ G +P   T+  +I+ +   G ++ 
Sbjct: 433 SECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWLND 492

Query: 424 A 424
           A
Sbjct: 493 A 493



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 181/379 (47%), Gaps = 11/379 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D +K  G +  +  +N L+ +L        A++F ++       P   T++I+I    
Sbjct: 111 VLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIEATL 170

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    EA K++D MF+    P+V  +  ++  +C+ G +  A EV+  +   G   ++ 
Sbjct: 171 LQGGIDEAIKLLDEMFEINLQPDVFPYNSII-XMCREGYVDRAFEVISSISSKGYALDVI 229

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN LL+ L   G+ E  +E++ ++   G + +V TY+ ++   C+ G+  E + LL + 
Sbjct: 230 TYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDM 289

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            ++G+ P+   ++ L    CKEG     + +L +M    C+PD ++Y+T+L  L K  + 
Sbjct: 290 KKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRA 349

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+SIF+++   G   +    N++   L     + +     A  +  +M   V   D  
Sbjct: 350 DEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVR-----ALGMILEMLDXVD-PDVI 403

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHI---PRTITFNNVIQALCGEGKIDKALLLL 428
            Y  +I  L +    DEA I L   +EM      P  +++N V+  LC  G++  A  +L
Sbjct: 404 AYNSLISCLCRDGMVDEA-IELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVL 462

Query: 429 FLMYEHAKIPSRTSYDMLI 447
             M +   +P+ T+Y  LI
Sbjct: 463 AAMVDKGCLPNETTYTFLI 481



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 138/314 (43%), Gaps = 5/314 (1%)

Query: 41  ESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNE 100
           E  ++   P        +   +   +    ++  SI   G    V  +N LL +L    +
Sbjct: 184 EMFEINLQPDVFPYNSIIXMCREGYVDRAFEVISSISSKGYALDVITYNILLRSLXNQGK 243

Query: 101 QETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
            E   +  S+  + G   N  T+S++I   C      E   ++  M   G  P+   +  
Sbjct: 244 WEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDP 303

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+  LCK GR+  A+EVLD M   GC P+I  YN +L  LC   R +EA  +   +   G
Sbjct: 304 LIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVG 363

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
             P+  +Y  V       G    A+ ++ E ++  V P+V+ +N+L +  C++G   + +
Sbjct: 364 CSPNASSYNTVFSALGSSGHKVRALGMILEMLDX-VDPDVIAYNSLISCLCRDGMVDEAI 422

Query: 281 GLL--KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            LL    M+   C P  +SY+ +L GL + G++  A  +   MV  G   +E     L+ 
Sbjct: 423 ELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIE 482

Query: 339 GLCMKSW--EEKDL 350
           G+    W  + +DL
Sbjct: 483 GIGFGGWLNDARDL 496



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 131/280 (46%), Gaps = 6/280 (2%)

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           +  A +VLD+M   G  P+I TYN L+  LC  G +  A E    +  +   P V TYT 
Sbjct: 105 IPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTI 164

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           +++     G  +EA++LL+E  E  + P+V  +N++    C+EG   +   ++  +  + 
Sbjct: 165 LIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSKG 223

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
              D I+Y+ LL  L   GK      +  +MV  G E +    + L+  LC         
Sbjct: 224 YALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGK----- 278

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           +E+   + + M KK    D   Y  +I  L K  + D A+  L   I  G +P  + +N 
Sbjct: 279 VEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNT 338

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ++  LC + + D+AL +   + E    P+ +SY+ + + L
Sbjct: 339 ILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSAL 378



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 4/205 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I++ D +  DG    + ++N +L  L      + A+  F +    G +PN+ +++ +   
Sbjct: 318 IEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSA 377

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD--QMGRIGCK 187
             +      A  +I  M D    P+V  +  L++ LC+ G + EA+E+L   +M    CK
Sbjct: 378 LGSSGHKVRALGMILEMLDX-VDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECK 436

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P++ +YN +L GLC VGRV +A E+L  + + G  P+  TYT +++G    G  N+A +L
Sbjct: 437 PSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDL 496

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCK 272
               +         +F  L+  +CK
Sbjct: 497 ATTLVNMDAISE-HSFERLYKTFCK 520


>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
 gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
          Length = 461

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 198/411 (48%), Gaps = 18/411 (4%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF--FSEASSYGLAPNSWTFSIMIRC 129
           +FD + + G   ++   N  L  +   +      ++   + A +  + PN +T+S++I C
Sbjct: 34  VFDELLRRGKGATIYGLNRALDDVARHSPAAAVSRYNRMARAGADEVTPNLYTYSVLIGC 93

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCKP 188
            C           +  +   G+     TFT L+  LC   R  +A++ VL +M ++GC P
Sbjct: 94  CCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLCRMTQLGCIP 153

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDGFCKVGRSNEAME 246
           N+ +   LLKGLC   R +EA E+L  + +DG    PDV  Y  V++GF K G  ++A  
Sbjct: 154 NVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVINGFFKEGDPDKAYA 213

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
             +E  ++G+ P+VVT++++    CK     K + +L  M K   +P+  +Y+++++G  
Sbjct: 214 TYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYC 273

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             G++  A+   K M   G E D    N L+  LC     +     +A ++F  MTK   
Sbjct: 274 SSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLC-----KNRRCTEARKIFNSMTKCGL 328

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGKID 422
             D  TY     TL +G  T  AL+ +H  +++    G  P    FN +I A   + K+D
Sbjct: 329 KPDITTYC----TLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKVD 384

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +A+L+   M +    P+  +Y  +I  L +L + YDA       + +G+ P
Sbjct: 385 EAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTP 435



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 141/288 (48%), Gaps = 3/288 (1%)

Query: 67  KERIDIFDSIKKDGTNW--SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           +E +++   +  DG +    V  +N ++       + + A   + E    G+ P+  T+S
Sbjct: 172 QEALELLQMMPDDGGDCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYS 231

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +I   C      +A +V++ M  NG  PN  T+  +V+  C SG+L EA+  L  M   
Sbjct: 232 SIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSD 291

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G +P++ T N L+  LC   R  EA ++  ++   GLKPD+ TY  ++ G+   G   E 
Sbjct: 292 GVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEM 351

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            +LL+  +  G+ PN   FN L   Y K+    + + +   M+++   P+ ++Y T+++ 
Sbjct: 352 HDLLDLMVWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDV 411

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEEKDLL 351
           L K G++  AV   K+M+  G   D  +   L+ G C    WE+ + L
Sbjct: 412 LCKLGRVYDAVLTLKQMINEGLTPDIIVYTPLIHGFCTCDKWEKAEEL 459



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 105/210 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + + +++ +++ K+G   +   +N ++       +   A+ F     S G+ P+  
Sbjct: 239 KAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVV 298

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T ++++   C      EARK+ + M   G  P++TT+  L+      G L E  ++LD M
Sbjct: 299 TCNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLM 358

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +PN   +N L+       +V+EA  +   ++  GL P+   Y  V+D  CK+GR 
Sbjct: 359 VWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRV 418

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
            +A+  L + I  G+TP+++ +  L +G+C
Sbjct: 419 YDAVLTLKQMINEGLTPDIIVYTPLIHGFC 448



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 147/342 (42%), Gaps = 47/342 (13%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK---PNIQTYN 194
           +AR V D +   G    +      ++ + +      A+   ++M R G     PN+ TY+
Sbjct: 30  DARHVFDELLRRGKGATIYGLNRALDDVARHSP-AAAVSRYNRMARAGADEVTPNLYTYS 88

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEAIE 253
            L+   C  GR++  +  L NV   G + +  T+T ++ G C   R+++AM++ L    +
Sbjct: 89  VLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLCRMTQ 148

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR--NCLPDKISYSTLLNGLLKWGKI 311
            G  PNV +   L  G C E    + + LL++M     +C PD + Y+T++NG  K G  
Sbjct: 149 LGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVINGFFKEGDP 208

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
                                                   + AY  + +M  +  + D  
Sbjct: 209 ----------------------------------------DKAYATYHEMFDQGILPDVV 228

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L K +  D+A+  L+  ++ G +P   T+N+++   C  G++ +A+  L +M
Sbjct: 229 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMM 288

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                 P   + ++L+  L +  +  +A  ++ +  K G+ P
Sbjct: 289 CSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCGLKP 330



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 2/184 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET-AVKFFSEASSYGLAPNSWTFS 124
           L E I     +  DG    V   N LLM  +  N + T A K F+  +  GL P+  T+ 
Sbjct: 278 LTEAIGFLKMMCSDGVEPDVVTCN-LLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYC 336

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +++ Y  K    E   ++D M  NG  PN   F IL+ +  K  ++ EA+ V  +M + 
Sbjct: 337 TLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQ 396

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  PN   Y  ++  LC +GRV +A   L  + N+GL PD+  YT ++ GFC   +  +A
Sbjct: 397 GLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYTPLIHGFCTCDKWEKA 456

Query: 245 MELL 248
            EL+
Sbjct: 457 EELI 460


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 182/387 (47%), Gaps = 6/387 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L   + +FD ++  G   S+   N +L  L    +    V  F +    G  P+ +T
Sbjct: 186 AGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFT 245

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
            +IM + YC       A + ++ M   G   N+  +  ++N  C+ G+  +A  +LD + 
Sbjct: 246 VAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLP 305

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-KNDGLKPDVYTYTAVMDGFCKVGRS 241
             G  PNI TY  L+KG C    +EEA  ++  + KN  L  D   + AV++G+C++GR 
Sbjct: 306 GRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRM 365

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  LLNE ++  +  N+  +N + NGYCK G  ++   +L  M      PD  SY++L
Sbjct: 366 EDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSL 425

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K G +  A   +  M+R GF       N+LL+G C         ++DA +++  M
Sbjct: 426 VDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFC-----SLGSIDDALRLWFLM 480

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            KK    +  +   ++    K  KT++AL      +  G    T TFN VI  LC   ++
Sbjct: 481 LKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERM 540

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLIT 448
            +A  L+  M +    P   +Y  L +
Sbjct: 541 PEAEELVDKMKQWRCPPDIITYRTLFS 567



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 198/405 (48%), Gaps = 6/405 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++  + + K G   ++  ++ ++     + +   A +        G +PN  T++++++ 
Sbjct: 263 LEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKG 322

Query: 130 YCNKNDFFEARKVIDCMFDN-GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
           YCN+ +  EA  V+  +  N     +   F  ++N  C+ GR+++A  +L++M     + 
Sbjct: 323 YCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQV 382

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N+  YN ++ G C +GR+ EA+ +L  +   G++PD Y+Y +++DG+CK G  N+A E  
Sbjct: 383 NLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETY 442

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           N  +  G     +T+N L  G+C  G+    + L  LM K+   P++IS STLL+G  K 
Sbjct: 443 NTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKS 502

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           GK   A++++KE +  G   +    N+++ GLC     + + + +A ++ +KM +     
Sbjct: 503 GKTEKALNLWKETLARGLAKNTTTFNTVINGLC-----KIERMPEAEELVDKMKQWRCPP 557

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  TY  +     K    D A   L+    +G  P    FN++I       +  K   +L
Sbjct: 558 DIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDIL 617

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           F M      P+  +Y  LI    +    + A  LY   +++G++P
Sbjct: 618 FEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVP 662



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 168/367 (45%), Gaps = 13/367 (3%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           F  ++     +   E A +  +E     L  N + ++IMI  YC      EA  ++  M 
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+  ++  LV+  CK G + +A E  + M R G      TYN LLKG C +G ++
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +   +   G+ P+  + + ++DGF K G++ +A+ L  E + RG+  N  TFNT+ 
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG CK     +   L+  MK+  C PD I+Y TL +G  K G +  A  I  E+   GF 
Sbjct: 532 NGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFA 591

Query: 328 VDERMMNSLLRGLCMKSWEEK--DLLEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGKG 383
                 NSL+ G  +     K  D+L      FE   + +S   P T  YG +I    K 
Sbjct: 592 PTIEFFNSLITGHFIAKQHGKVNDIL------FEMSNRGLS---PNTVAYGALIAGWCKE 642

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
                A       IE G +P     ++++     +GK D+A L+L  +     IP  ++ 
Sbjct: 643 GDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAP 702

Query: 444 DMLITKL 450
            + I K+
Sbjct: 703 RLEIGKV 709



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 171/351 (48%), Gaps = 6/351 (1%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F +++R   N      A +V D M   G   ++ +   ++N L ++G L   + V +QM
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  P+  T   + K  C V  V  A E +  +   G++ ++  Y AVM+G+C+VG++
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK-RNCLPDKISYST 300
           N+A  +L+    RG +PN+VT+  L  GYC E    +  G+++ ++K +  + D+  +  
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGA 354

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++NG  + G++  A  +  EMV    +V+  + N ++ G C     +   + +A+ +  +
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYC-----KLGRMVEAHNILHE 409

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           MT      D  +Y  ++    K    ++A    +  +  G    T+T+N +++  C  G 
Sbjct: 410 MTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGS 469

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           ID AL L FLM +    P+  S   L+    +  K+  A  L+   L +G+
Sbjct: 470 IDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGL 520



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/434 (23%), Positives = 191/434 (44%), Gaps = 31/434 (7%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + +  + ++++ ++G   +   +N LL     L   + A++ +      G+APN  + S 
Sbjct: 435 MNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCST 494

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  +       +A  +       G   N TTF  ++N LCK  R+ EA E++D+M +  
Sbjct: 495 LLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWR 554

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P+I TY  L  G C +G ++ A  +L  ++N G  P +  + +++ G     +  +  
Sbjct: 555 CPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVN 614

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++L E   RG++PN V +  L  G+CKEG       L   M ++  +P+    S+L++  
Sbjct: 615 DILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCF 674

Query: 306 LKWGKIRPA-------------------------VSIFKEMVRFGFEVDERMM-NSLLRG 339
            + GK   A                         V+ F + V  G     ++M N ++ G
Sbjct: 675 YRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFG 734

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC     +   +EDA  +   +  K  V D  TY  +I         D A       + +
Sbjct: 735 LC-----KLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSV 789

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P  +T+N++I  LC  G++ +A+ L   ++     P+  +Y+ LI K  +     +A
Sbjct: 790 GLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEA 849

Query: 460 CALYGAALKQGVIP 473
             L    +++G+ P
Sbjct: 850 FKLKQRMIEEGIHP 863



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 161/351 (45%), Gaps = 31/351 (8%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I + ++  G   ++  FN L+    +  +         E S+ GL+PN+  +  +I  +C
Sbjct: 581 ILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWC 640

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            + D   A  +   M + G  PN+   + LV+   + G+  EA  VL  +      P+I 
Sbjct: 641 KEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDIS 700

Query: 192 T--------------------------YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
                                      +N ++ GLC +GR+E+A  +L ++K+ G   D 
Sbjct: 701 APRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADN 760

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           +TY++++ G    G  + A +L +  +  G+TPN+VT+N+L  G CK G   + V L K 
Sbjct: 761 FTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKK 820

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           +  +   P+ I+Y+TL++   K G I  A  + + M+  G        + L+ GLC + +
Sbjct: 821 LWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGY 880

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
                +E+A ++ ++M +     +  TY  +I+   + +  D  ++ L  +
Sbjct: 881 -----MEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQS 926



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 170/377 (45%), Gaps = 31/377 (8%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           + E A+  + E  + GLA N+ TF+ +I   C      EA +++D M      P++ T+ 
Sbjct: 504 KTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYR 563

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L +  CK G +  A  +L+++  +G  P I+ +N L+ G     +  +  ++L  + N 
Sbjct: 564 TLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNR 623

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           GL P+   Y A++ G+CK G  + A  L  E IE+G+ PN+   ++L + + ++G   + 
Sbjct: 624 GLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEA 683

Query: 280 VGLLKLMKKRNCLPD--------------------------KISYSTLLNGLLKWGKIRP 313
             +L+ +   + +PD                          KI ++ ++ GL K G+I  
Sbjct: 684 NLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIED 743

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A ++  ++   GF  D    +SL+ G C  S      ++ A+ + + M       +  TY
Sbjct: 744 AKNLLADLKDKGFVADNFTYSSLIHG-CSAS----GFVDVAFDLRDTMLSVGLTPNIVTY 798

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             +I  L K  +   A+         G  P  IT+N +I   C +G I +A  L   M E
Sbjct: 799 NSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIE 858

Query: 434 HAKIPSRTSYDMLITKL 450
               P+  +Y +LI  L
Sbjct: 859 EGIHPTVFTYSILINGL 875



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 151/321 (47%), Gaps = 6/321 (1%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           +  +F +L+ +L  +G+L  AL+V D+M  +GC+ ++++ N +L  L   G +     + 
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             ++  G  PD +T   +   +CKV     A+E + E  + GV  N+V ++ + NGYC+ 
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF-GFEVDERM 332
           G       +L  +  R   P+ ++Y+ L+ G      +  A  + +E+ +     VDE +
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             +++ G C     +   +EDA ++  +M       +   Y I+I    K  +  EA   
Sbjct: 352 FGAVINGYC-----QMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNI 406

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           LH    +G  P T ++N+++   C +G ++KA      M  +    +  +Y+ L+     
Sbjct: 407 LHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCS 466

Query: 453 LEKSYDACALYGAALKQGVIP 473
           L    DA  L+   LK+G+ P
Sbjct: 467 LGSIDDALRLWFLMLKKGIAP 487



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/426 (22%), Positives = 180/426 (42%), Gaps = 32/426 (7%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D   K+   ++ ++++      G   + + FN ++  L  +     A + 
Sbjct: 487 PNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEEL 546

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             +   +   P+  T+  +   YC   D   A ++++ + + G+ P +  F  L+     
Sbjct: 547 VDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFI 606

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           + +  +  ++L +M   G  PN   Y  L+ G C  G +  AY + + +   GL P+++ 
Sbjct: 607 AKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFI 666

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV--------------------------V 261
            ++++  F + G+ +EA  +L   +   + P++                          +
Sbjct: 667 CSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKI 726

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            +N +  G CK G       LL  +K +  + D  +YS+L++G    G +  A  +   M
Sbjct: 727 MWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTM 786

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +  G   +    NSL+ GLC KS E    L  A  +F+K+  K    +  TY  +I    
Sbjct: 787 LSVGLTPNIVTYNSLIYGLC-KSGE----LSRAVSLFKKLWTKGISPNAITYNTLIDKHC 841

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K     EA       IE G  P   T++ +I  LC +G +++A+ LL  M E+   P+  
Sbjct: 842 KDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYV 901

Query: 442 SYDMLI 447
           +Y  LI
Sbjct: 902 TYWTLI 907



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 147/329 (44%), Gaps = 27/329 (8%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           DI   +   G + +   +  L+       +  TA   + E    GL PN +  S ++ C+
Sbjct: 615 DILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCF 674

Query: 131 CNKNDFFEARKV--------------------------IDCMFDNGYHPNVTTFTILVNS 164
             K  F EA  V                          ID +    +H     + I++  
Sbjct: 675 YRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFG 734

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           LCK GR+++A  +L  +   G   +  TY+ L+ G    G V+ A+++   + + GL P+
Sbjct: 735 LCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPN 794

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           + TY +++ G CK G  + A+ L  +   +G++PN +T+NTL + +CK+G   +   L +
Sbjct: 795 IVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQ 854

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MK 343
            M +    P   +YS L+NGL   G +  A+ +  +M+    + +     +L++G    +
Sbjct: 855 RMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCE 914

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
           S +   +  D   +  K + + +V  PG+
Sbjct: 915 SVDVPIMPLDQSTIVVKASPRRAVRRPGS 943



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 49/119 (41%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  L   + +F  +   G + +   +N L+           A K        G+ P  +
Sbjct: 807 KSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVF 866

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T+SI+I   C +    EA K++D M +N   PN  T+  L+    +   +   +  LDQ
Sbjct: 867 TYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQ 925


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 205/408 (50%), Gaps = 13/408 (3%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRC 129
           ++FD + K G +  V  FN L+    +  + E A+       S + + P++ T++ +++ 
Sbjct: 190 EVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKA 249

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
              K    + + ++  M  NG  PN  T+  LV   CK G LKEA ++++ M +    P+
Sbjct: 250 MSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPD 309

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TYN L+ G+C  G + E  E++  +K+  L+PDV TY  ++DG  ++G S EA +L+ 
Sbjct: 310 LCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLME 369

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK-LMKKRNCLPDKISYSTLLNGLLKW 308
           +    GV PN VT N      CKE    +    +K L++     PD ++Y TL+   LK 
Sbjct: 370 QMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKV 429

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G +  A+ + +EM + G +++   +N++L  LC     ++  +++A+ + +   K+  + 
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALC-----KERKVDEAHNLLDSAHKRGYIV 484

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  TYG +I    + +K ++A         +   P   TFN++I  LC  GK + A+   
Sbjct: 485 DEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKF 544

Query: 429 FLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYGAALKQGVIP 473
             + E   +P   +++ +I    K  ++EK+++    Y  ++K    P
Sbjct: 545 DELAESGLLPDDCTFNSIILGYCKEGRVEKAFE---FYNESIKHSFKP 589



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 189/378 (50%), Gaps = 11/378 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC---YCNKNDFFEARKVID 144
           F+  L A +   +   A++ F +     L PN  T + ++     Y +      AR+V D
Sbjct: 134 FDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFD 193

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYV 203
            M   G   +V TF +LVN  C  G+L++AL +L++M       P+  TYN +LK +   
Sbjct: 194 DMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKK 253

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           GR+ +  ++L+++K +GL P+  TY  ++ G+CK+G   EA +++    +  + P++ T+
Sbjct: 254 GRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTY 313

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N L NG C  G+  +G+ L+ +MK     PD ++Y+TL++G  + G    A  + ++M  
Sbjct: 314 NILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMEN 373

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G + ++   N  L+ LC +   E    E   +V E +       D  TY  +I+   K 
Sbjct: 374 DGVKPNQVTHNISLKWLCKEEKRE----EVTRKVKELVEMHGFSPDIVTYHTLIKAYLKV 429

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
                AL  +    + G    TIT N ++ ALC E K+D+A  LL   ++   I    +Y
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTY 489

Query: 444 DMLIT---KLDQLEKSYD 458
             LI    + +++EK+++
Sbjct: 490 GTLIMGYFREEKVEKAFE 507



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 174/367 (47%), Gaps = 7/367 (1%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  ++E +++ D +K       V  +N L+     L     A K   +  + G+ PN  T
Sbjct: 323 AGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVT 382

Query: 123 FSIMIRCYCNKNDFFE-ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +I ++  C +    E  RKV + +  +G+ P++ T+  L+ +  K G L  ALE++ +M
Sbjct: 383 HNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM 442

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           G+ G K N  T N +L  LC   +V+EA+ +L +    G   D  TY  ++ G+ +  + 
Sbjct: 443 GQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKV 502

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A E+ +E     +TP V TFN+L  G C  G     +     + +   LPD  +++++
Sbjct: 503 EKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSI 562

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G  K G++  A   + E ++  F+ D    N LL GLC +   EK     A   F  +
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK-----ALNFFNTL 617

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +  V D  TY  +I    K KK  EA   L    E    P   T+N++I +L  +GK+
Sbjct: 618 ITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKL 676

Query: 422 DKALLLL 428
            +A  LL
Sbjct: 677 SEADELL 683



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 192/420 (45%), Gaps = 32/420 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L +  D+   +K++G   +   +N+L+     L   + A +         + P+  
Sbjct: 252 KKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLC 311

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I   CN     E  +++D M      P+V T+  L++   + G   EA ++++QM
Sbjct: 312 TYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQM 371

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGR 240
              G KPN  T+N  LK LC   + EE    +   V+  G  PD+ TY  ++  + KVG 
Sbjct: 372 ENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGD 431

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A+E++ E  ++G+  N +T NT+ +  CKE    +   LL    KR  + D+++Y T
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGT 491

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------MKSWEE----- 347
           L+ G  +  K+  A  ++ EM R          NSL+ GLC        M+ ++E     
Sbjct: 492 LIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESG 551

Query: 348 -----------------KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                            +  +E A++ + +  K     D  T  I++  L K   T++AL
Sbjct: 552 LLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              +  I    +  T+T+N +I A C + K+ +A  LL  M E    P R +Y+ +IT L
Sbjct: 612 NFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSL 670



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 131/267 (49%), Gaps = 4/267 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L   +++   + + G   +    N +L AL    + + A      A   G   + 
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDE 486

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+  +I  Y  +    +A ++ D M      P VTTF  L+  LC  G+ + A+E  D+
Sbjct: 487 VTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDE 546

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           +   G  P+  T+N ++ G C  GRVE+A+E          KPD YT   +++G CK G 
Sbjct: 547 LAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606

Query: 241 SNEAMELLNEAI-ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           + +A+   N  I ER V  + VT+NT+ + +CK+    +   LL  M+++   PD+ +Y+
Sbjct: 607 TEKALNFFNTLITEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYN 664

Query: 300 TLLNGLLKWGKIRPAVSIFKEMV-RFG 325
           +++  L++ GK+  A  + K+   +FG
Sbjct: 665 SIITSLMEDGKLSEADELLKKFSGKFG 691



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 9/205 (4%)

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           LL+  +     P+   F+   + Y   G P   + + + M +    P+ ++ +TLL GL+
Sbjct: 118 LLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLV 177

Query: 307 KWG---KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           ++     I  A  +F +MV+ G  +D +  N L+ G C++       LEDA  + E+M  
Sbjct: 178 RYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGK-----LEDALGMLERMVS 232

Query: 364 KVSVT-DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           + +V  D  TY  +++ + K  +  +    L      G +P  +T+NN++   C  G + 
Sbjct: 233 EFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLK 292

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLI 447
           +A  ++ LM +   +P   +Y++LI
Sbjct: 293 EAFQIVELMKQTNILPDLCTYNILI 317



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 92/231 (39%), Gaps = 44/231 (19%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV--------------------- 261
           P    +   +  +   G+ + A+++  + I   + PN++                     
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 262 -----------------TFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLN 303
                            TFN L NGYC EG     +G+L +++ + N  PD ++Y+T+L 
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
            + K G++     +  +M R G   +    N+L+ G C         L++A+Q+ E M +
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGS-----LKEAFQIVELMKQ 303

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
              + D  TY I+I  +       E L  +     +   P  +T+N +I  
Sbjct: 304 TNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDG 354



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 6/174 (3%)

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P K  +   L+  L  GK   A+ +F++M+R   + +    N+LL GL    +     + 
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLV--RYPSSFSIA 186

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI-EMGHIPRTITFNNV 411
            A +VF+ M K     D  T+ +++       K ++AL  L   + E    P  +T+N +
Sbjct: 187 SAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTI 246

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACAL 462
           ++A+  +G++     LL  M  +  +P+R +Y+ L+    KL  L++++    L
Sbjct: 247 LKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 216/470 (45%), Gaps = 23/470 (4%)

Query: 17  RRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDR------------IKAS 64
           R  H+ I  +  L + +   L       L+     L A+R ++R             +A 
Sbjct: 129 RYRHDPIVYYAMLEILSKTKLCQGAKRVLR-----LMAKRRIERRPEAFGYVMVSYSRAG 183

Query: 65  PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
            L+  +     ++K G    +S  N  +  LVM N  + AV+F        + PN  T++
Sbjct: 184 KLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYN 243

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR- 183
            +I+ YC+ +   +A ++I  M   G  P+  ++  ++  LCK  R+KE   ++++M + 
Sbjct: 244 CLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKD 303

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               P+  TYN  +  L   G  +EA E L   +    + D   Y+A++  FC+ GR ++
Sbjct: 304 SNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDK 363

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A E++NE   +G  P+VVT+ ++ NG C+E    +   +L+ M K  C P+ +SY+ LLN
Sbjct: 364 AKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLN 423

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL K G    A    +EM+    E    + N++   + M  +  +    +A  +  +M K
Sbjct: 424 GLCKNGNSLEA----REMMNMS-EEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIK 478

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           K     P    ++I++L + +K DEA   +   +  G     + F  VI   C +  ++ 
Sbjct: 479 KGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEA 538

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           AL LL  MY   K P   +Y  +I  L +  +  +A  L    L+ G IP
Sbjct: 539 ALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIP 588



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 175/353 (49%), Gaps = 7/353 (1%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           L P+  T++  +          EA + +    +  +  +   ++ +V+S C+ GR+ +A 
Sbjct: 306 LLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAK 365

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           E++++M   GC P++ TY  ++ GLC   +V++A +ML  +   G KP+  +YTA+++G 
Sbjct: 366 EIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGL 425

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK G S EA E++N + E    PN +T++ L +G+ +EG   +   L++ M K+   P  
Sbjct: 426 CKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTP 485

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           +  + L+  L +  K+  A    ++ +  G  V+     +++ G C     +KD LE A 
Sbjct: 486 VEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFC-----QKDDLEAAL 540

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            + + M       D  TY  +I  LGK  + +EA       + +G IP  +T+  VI   
Sbjct: 541 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQY 600

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           C  G+++  L LL  M   ++   RT+Y+ +I KL        A  L G  L+
Sbjct: 601 CRMGRVEDLLKLLEKML--SRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLR 651



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 179/361 (49%), Gaps = 9/361 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N  +  L      + A++F  EA       +   +S ++  +C +    +A+++++ MF
Sbjct: 313 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V T+T ++N LC+  ++ +A ++L QM + GCKPN  +Y  LL GLC  G   
Sbjct: 373 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 432

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA EM+   +     P+  TY+ +M GF + G+S+EA +L+ E I++G  P  V  N L 
Sbjct: 433 EAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLI 492

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              C+E    +    ++      C  + ++++T+++G  +   +  A+S+  +M      
Sbjct: 493 QSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKH 552

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D     +++  L      +K  +E+A ++  KM +   +  P TY  VI    +  + +
Sbjct: 553 PDVVTYTTIIDAL-----GKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVE 607

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF-LMYEHAKIPSRTSYDML 446
           + L  L   +      RT  +N VI+ LC  G +++A  LL  ++   +KI + T + ML
Sbjct: 608 DLLKLLEKMLSRQEC-RT-AYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCH-ML 664

Query: 447 I 447
           I
Sbjct: 665 I 665



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/411 (22%), Positives = 190/411 (46%), Gaps = 26/411 (6%)

Query: 50  RSLQAQRF-VDRIKASPL------KERID----IFDSIKKDGTNWSVSDFNDLLMALVML 98
           R  + +RF VD++  S +      + R+D    I + +   G    V  +  ++  L   
Sbjct: 334 REAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQE 393

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
            + + A K   +   +G  PN+ +++ ++   C   +  EAR++++   +  + PN  T+
Sbjct: 394 RKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITY 453

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
           ++L++   + G+  EA +++ +M + G  P     N L++ LC   +V+EA   +    N
Sbjct: 454 SVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLN 513

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +G   +V  +T V+ GFC+      A+ LL++       P+VVT+ T+ +   K+G   +
Sbjct: 514 NGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEE 573

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              L   M +   +P  ++Y T+++   + G++   + + ++M+    +      N ++ 
Sbjct: 574 ATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKML--SRQECRTAYNQVIE 631

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT-LGKGKKTDEALIHLHHAI 397
            LC  S+     LE AY++  K+ +  S  D  T  ++I + L KG      L+  + A 
Sbjct: 632 KLC--SFGN---LEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGI----PLMSYNVAC 682

Query: 398 EMGH---IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            M +   IP       V + L  EGK ++A  L+    E  +I  +   D+
Sbjct: 683 RMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQCQLDL 733


>gi|357129239|ref|XP_003566273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 550

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 188/388 (48%), Gaps = 9/388 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY-CNKNDFFEARKVIDCM 146
           F  +  AL   +    A+      ++ G+AP++   ++++  Y C    F  A +V+  M
Sbjct: 102 FTTVAAALSSASRPGAALAVLEAMAADGVAPDTVACTVLVGVYACRLQQFDAAYEVVRWM 161

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            DNG  P+V T++ L+  LC++ R+ EAL VLD M   GC PN  TY  ++   C  G +
Sbjct: 162 TDNGVAPDVVTYSTLICGLCRAQRVAEALGVLDLMLEEGCHPNAHTYTPIMHAYCTTGMI 221

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            EA ++L ++   G  P   TY  +++   KVG   E   LL E+  +G  P+ +T++T 
Sbjct: 222 HEAKKLLDSMIAAGCAPSTATYNVLIEALSKVGAFEEVDVLLEESTSKGWIPDTITYSTY 281

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G C+ G   K   L+  M      P++++ + LLNG+ +      A  + +     G+
Sbjct: 282 MDGLCRSGRVDKSFALVDRMLSNGLHPNEVTLNILLNGVCRSLTAWAAKCLLECSAELGW 341

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           +      N+++R LC    +E+  L    ++F  M+KK    +  T  IV+ +L K  K 
Sbjct: 342 DASVINYNTVMRRLC----DERRWLA-VVKLFTDMSKKGIAPNSWTLNIVVHSLCKLGKL 396

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
             AL  L  + E   +   IT+N +I  L   GK ++  LLL  M E    P+ T+Y ++
Sbjct: 397 RNALC-LMGSEEF--VANAITYNTLIHHLSLSGKANEVYLLLHDMIEEGIAPNETTYSLV 453

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQ 474
           I  L + EK   A + +  + + G  P 
Sbjct: 454 IDCLCREEKFSVALSCFYRSCEDGFSPS 481



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 160/345 (46%), Gaps = 8/345 (2%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           L + + A +     +  G+AP+  T+S +I   C      EA  V+D M + G HPN  T
Sbjct: 148 LQQFDAAYEVVRWMTDNGVAPDVVTYSTLICGLCRAQRVAEALGVLDLMLEEGCHPNAHT 207

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           +T ++++ C +G + EA ++LD M   GC P+  TYN L++ L  VG  EE   +L    
Sbjct: 208 YTPIMHAYCTTGMIHEAKKLLDSMIAAGCAPSTATYNVLIEALSKVGAFEEVDVLLEEST 267

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           + G  PD  TY+  MDG C+ GR +++  L++  +  G+ PN VT N L NG C+  T  
Sbjct: 268 SKGWIPDTITYSTYMDGLCRSGRVDKSFALVDRMLSNGLHPNEVTLNILLNGVCRSLTAW 327

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
               LL+   +       I+Y+T++  L    +    V +F +M + G   +   +N ++
Sbjct: 328 AAKCLLECSAELGWDASVINYNTVMRRLCDERRWLAVVKLFTDMSKKGIAPNSWTLNIVV 387

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
             LC         L         M  +  V +  TY  +I  L    K +E  + LH  I
Sbjct: 388 HSLCK--------LGKLRNALCLMGSEEFVANAITYNTLIHHLSLSGKANEVYLLLHDMI 439

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
           E G  P   T++ VI  LC E K   AL   +   E    PS  S
Sbjct: 440 EEGIAPNETTYSLVIDCLCREEKFSVALSCFYRSCEDGFSPSAVS 484



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 5/275 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   + DS+   G   S + +N L+ AL  +   E       E++S G  P++ T+S 
Sbjct: 221 IHEAKKLLDSMIAAGCAPSTATYNVLIEALSKVGAFEEVDVLLEESTSKGWIPDTITYST 280

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +   C      ++  ++D M  NG HPN  T  IL+N +C+S     A  +L+    +G
Sbjct: 281 YMDGLCRSGRVDKSFALVDRMLSNGLHPNEVTLNILLNGVCRSLTAWAAKCLLECSAELG 340

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              ++  YN +++ LC   R     ++  ++   G+ P+ +T   V+   CK+G+   A+
Sbjct: 341 WDASVINYNTVMRRLCDERRWLAVVKLFTDMSKKGIAPNSWTLNIVVHSLCKLGKLRNAL 400

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L+          N +T+NTL +     G   +   LL  M +    P++ +YS +++ L
Sbjct: 401 CLMG---SEEFVANAITYNTLIHHLSLSGKANEVYLLLHDMIEEGIAPNETTYSLVIDCL 457

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +  K   A+S F      GF      ++S++RGL
Sbjct: 458 CREEKFSVALSCFYRSCEDGF--SPSAVSSIVRGL 490



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 150/358 (41%), Gaps = 10/358 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E + + D + ++G + +   +  ++ A         A K      + G AP++ 
Sbjct: 182 RAQRVAEALGVLDLMLEEGCHPNAHTYTPIMHAYCTTGMIHEAKKLLDSMIAAGCAPSTA 241

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I        F E   +++     G+ P+  T++  ++ LC+SGR+ ++  ++D+M
Sbjct: 242 TYNVLIEALSKVGAFEEVDVLLEESTSKGWIPDTITYSTYMDGLCRSGRVDKSFALVDRM 301

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN  T N LL G+C       A  +L      G    V  Y  VM   C   R 
Sbjct: 302 LSNGLHPNEVTLNILLNGVCRSLTAWAAKCLLECSAELGWDASVINYNTVMRRLCDERRW 361

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
              ++L  +  ++G+ PN  T N + +  CK G   K    L LM     + + I+Y+TL
Sbjct: 362 LAVVKLFTDMSKKGIAPNSWTLNIVVHSLCKLG---KLRNALCLMGSEEFVANAITYNTL 418

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L   GK      +  +M+  G   +E   + ++  LC    EEK     A   F + 
Sbjct: 419 IHHLSLSGKANEVYLLLHDMIEEGIAPNETTYSLVIDCLCR---EEK--FSVALSCFYRS 473

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            +      P     ++R L  G K  E    +   +  G       +  VI A C +G
Sbjct: 474 CED--GFSPSAVSSIVRGLINGGKLGELHNLIGWILGQGFAIDVYMYREVIIAFCKKG 529



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 6/227 (2%)

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY-CKEGTPMKGV 280
           +PD   +T V        R   A+ +L      GV P+ V    L   Y C+        
Sbjct: 96  RPDAACFTTVAAALSSASRPGAALAVLEAMAADGVAPDTVACTVLVGVYACRLQQFDAAY 155

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +++ M      PD ++YSTL+ GL +  ++  A+ +   M+  G   +      ++   
Sbjct: 156 EVVRWMTDNGVAPDVVTYSTLICGLCRAQRVAEALGVLDLMLEEGCHPNAHTYTPIMHAY 215

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C        ++ +A ++ + M          TY ++I  L K    +E  + L  +   G
Sbjct: 216 CTTG-----MIHEAKKLLDSMIAAGCAPSTATYNVLIEALSKVGAFEEVDVLLEESTSKG 270

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            IP TIT++  +  LC  G++DK+  L+  M  +   P+  + ++L+
Sbjct: 271 WIPDTITYSTYMDGLCRSGRVDKSFALVDRMLSNGLHPNEVTLNILL 317


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 187/394 (47%), Gaps = 40/394 (10%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + E +   D ++K G    V  +N L    ++L     A K   +    GL P+  T
Sbjct: 319 AGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVT 378

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  +C   +  EA K+       G+  NV  + +L++ LCK GR++EAL + D+M 
Sbjct: 379 YTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEME 438

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEM-------------------LMNVKNDG--- 220
            +  +P+   Y+ L+ GLC  G V+ AY++                   L+ +  +G   
Sbjct: 439 TLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNIS 498

Query: 221 -------------LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
                        L  DV  Y  ++DG+ ++    EAM+L  + IERG+TP+VVTFNTL 
Sbjct: 499 EARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLI 558

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NG+C+ G  M+   +L++++ +  +P  ++Y+TL+N   + G ++       EM      
Sbjct: 559 NGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVV 618

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                   L++GLC      ++ + ++ Q+ E M  K  + D  TY  +I+   KGK+  
Sbjct: 619 PTHVTYTVLIKGLC-----RQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEIT 673

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           +AL   +  +     P  +T+  +I ALC  G +
Sbjct: 674 KALQLYNMMLLHNCDPTQVTYKVLINALCIFGDL 707



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 200/436 (45%), Gaps = 37/436 (8%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+++ IK  G   S    + L+  L   ++ E A+ F  +++   + P+  + + ++  +
Sbjct: 223 DVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKF 281

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C       AR     M  NG   +  ++ IL++ LC +G + EAL   D M + G +P++
Sbjct: 282 CKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDV 341

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L KG   +G +  A +++  +   GL PD+ TYT ++ G C++G   EA++L  E
Sbjct: 342 VTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQE 401

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + RG   NV+ +N L +  CK G   + + L   M+     PD I YS L++GL K G 
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461

Query: 311 IRPAVSIFKEM---VRFGFEVDERMMNSLLRGLC-----------MKSWEEKDLLED--- 353
           ++ A  ++++M    +F     +R   ++L GL              +W   DL+ED   
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQR---AVLLGLFKNGNISEARNYFDTWTRMDLMEDVVL 518

Query: 354 ----------------AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
                           A Q++ KM ++       T+  +I    +     EA   L    
Sbjct: 519 YNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIR 578

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             G +P  +T+  ++ A C  G + +    L  M  +A +P+  +Y +LI  L +  K +
Sbjct: 579 LKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMH 638

Query: 458 DACALYGAALKQGVIP 473
           ++  L      +G++P
Sbjct: 639 ESLQLLEYMYAKGLLP 654



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 180/398 (45%), Gaps = 5/398 (1%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K+G       +N LL  L +    + A+ F  +   +G+ P+  T++ + + +       
Sbjct: 299 KNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMS 358

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
            ARKV+  M   G +P++ T+T L+   C+ G ++EAL++  +    G K N+  YN LL
Sbjct: 359 GARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLL 418

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
             LC VGR+EEA  +   ++   L+PD   Y+ ++ G CK G    A +L  +   +   
Sbjct: 419 SCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKF 478

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+      +  G  K G   +         + + + D + Y+ +++G ++   I  A+ +
Sbjct: 479 PHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQL 538

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           + +M+  G        N+L+ G C +     DL+E A ++ E +  K  V    TY  ++
Sbjct: 539 YYKMIERGITPSVVTFNTLINGFCRRG----DLME-ARKMLEVIRLKGLVPSVVTYTTLM 593

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               +     E    LH       +P  +T+  +I+ LC + K+ ++L LL  MY    +
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLL 653

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           P   +Y+ +I    + ++   A  LY   L     P +
Sbjct: 654 PDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQ 691



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 157/341 (46%), Gaps = 7/341 (2%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFV--DRIKASPLKERIDIFDSIKKDGTNWSVSDFN 89
           F   +    E + LK       AQR V     K   + E  + FD+  +      V  +N
Sbjct: 461 FVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYN 520

Query: 90  DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
            ++   V L+    A++ + +    G+ P+  TF+ +I  +C + D  EARK+++ +   
Sbjct: 521 IMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLK 580

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G  P+V T+T L+N+ C+ G ++E    L +M      P   TY  L+KGLC   ++ E+
Sbjct: 581 GLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHES 640

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            ++L  +   GL PD  TY  ++  FCK     +A++L N  +     P  VT+  L N 
Sbjct: 641 LQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINA 700

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            C  G       ++  ++ RN    K +Y T++      G++  A+  F +M+  GF + 
Sbjct: 701 LCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVIS 760

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
            R  ++++  LC     ++ L+ +A   F  M  +    DP
Sbjct: 761 IRDYSAVINRLC-----KRGLITEAKYFFVMMLSEGVTPDP 796


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 202/403 (50%), Gaps = 6/403 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +++  L   I  F+ +   G     + FN+LL  +V  +       FF+E S   +  + 
Sbjct: 105 VQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-SKIKVVLDV 163

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           ++F I+I+  C   +  ++  ++  + + G+ PNV  +T L++  CK G +++A ++  +
Sbjct: 164 YSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           MG+ G   N  TY  L+ GL   G  ++ +EM   ++  G+ P++YTY  VM+  CK GR
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGR 283

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           + +A ++ +E  ERGV+ N+VT+NTL  G C+E    +   ++  MK     P+ I+Y+T
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNT 343

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G    GK+  A+S+ +++   G        N L+ G C      K     A ++ ++
Sbjct: 344 LIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFC-----RKGDTSGAAKMVKE 398

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++       TY I+I T  +    + A+       E+G +P   T++ +I   C +G+
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQ 458

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +++A  L   M E    P+   Y+ +I    +   SY A  L+
Sbjct: 459 MNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLF 501



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 176/353 (49%), Gaps = 5/353 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++  D+F  + K G   +   +  L+  L     ++   + + +   +G+ PN +
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLY 269

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C      +A KV D M + G   N+ T+  L+  LC+  +  EA +V+DQM
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 PN+ TYN L+ G C VG++ +A  +  ++K+ GL P + TY  ++ GFC+ G +
Sbjct: 330 KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT 389

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A +++ E  ERG+ P+ VT+  L + + +       + L   M++   +PD  +YS L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVL 449

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G    G++  A  +FK MV    E +E + N+++ G C +    +     A ++F  M
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYR-----ALRLFRDM 504

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            +K    +  +Y  +IR L K +K  EA   +   I+ G  P     N + +A
Sbjct: 505 EEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLISRA 557



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 148/318 (46%), Gaps = 6/318 (1%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           + +++N+  +S  L  ++   ++M   G  P    +N LL  +       + +    N  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWW-CFFNES 155

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
              +  DVY++  V+ G C+ G   ++ +LL E  E G +PNVV + TL +G CK+G   
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           K   L   M K   + ++ +Y+ L++GL K G  +    ++++M   G   +    N ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
             LC     +    +DA++VF++M ++    +  TY  +I  L +  K +EA   +    
Sbjct: 276 NQLC-----KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
                P  IT+N +I   C  GK+ KAL L   +      PS  +Y++L++   +   + 
Sbjct: 331 SYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTS 390

Query: 458 DACALYGAALKQGVIPQR 475
            A  +     ++G+ P +
Sbjct: 391 GAAKMVKEMEERGIKPSK 408


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 196/413 (47%), Gaps = 5/413 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   +F+ +K  G    +  +N L+       +   A ++FSE  + GL PN  
Sbjct: 336 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 395

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  +C +     A K+   M   G  PN  T+T L+++ CK+G L EA ++L+ M
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 455

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G K NI TY  LL GLC  GR+ EA E+  ++  DG+ P+   YTA++ G+ K  R 
Sbjct: 456 LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERM 515

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +AM++L +  E  + P+++ + ++  G+C +    +   +L+ MK R    + +  +T+
Sbjct: 516 EDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI 575

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++   K GK   A++ F+EM   G E        L+ GLC     +  ++E A   F +M
Sbjct: 576 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC-----KAGIVELAVDYFCRM 630

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                  +   Y  +I  L K    + A          G  P    F  +I      G +
Sbjct: 631 LSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNL 690

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            +AL+L+  M E A       Y  L++   Q  + + A   +   +++G++P+
Sbjct: 691 QEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE 743



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 189/385 (49%), Gaps = 5/385 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E  + F  ++   T       N LL  L      +   KFF++    G+AP+ +T+++
Sbjct: 235 LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNV 294

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI   C + D   +R++   M + G  P+V T+  L++   K G L+E   + ++M  +G
Sbjct: 295 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 354

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P+I TYN L+   C   ++  A+E    +KN+GLKP+V TY+ ++D FCK G    A+
Sbjct: 355 CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAI 414

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L  +    G+ PN  T+ +L +  CK G   +   LL  M +     + ++Y+ LL+GL
Sbjct: 415 KLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 474

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G++  A  +F+ M++ G   ++++  +L+ G     + + + +EDA ++ ++MT+  
Sbjct: 475 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG-----YIKAERMEDAMKILKQMTECN 529

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D   YG +I      +K +E  + L      G     +    +I A    GK   AL
Sbjct: 530 IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDAL 589

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKL 450
                M +     +  +Y +LI  L
Sbjct: 590 NFFQEMQDVGVEATIVTYCVLIDGL 614



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 177/386 (45%), Gaps = 5/386 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+    +F  +++ G +  V  +N L+     +   E     F+E    G  P+  
Sbjct: 301 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 360

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I CYC       A +    M +NG  PNV T++ L+++ CK G ++ A+++   M
Sbjct: 361 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDM 420

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  PN  TY  L+   C  G + EA+++L ++   G+K ++ TYTA++DG CK GR 
Sbjct: 421 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRM 480

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA E+    ++ G++PN   +  L +GY K       + +LK M + N  PD I Y ++
Sbjct: 481 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI 540

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G     K+     I +EM   G        N ++    + ++ +     DA   F++M
Sbjct: 541 IWGHCSQRKLEETKLILEEMKSRGISA-----NPVISTTIIDAYFKAGKSSDALNFFQEM 595

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                     TY ++I  L K    + A+ +    + +G  P    + ++I  LC    I
Sbjct: 596 QDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCI 655

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI 447
           + A  L   M      P  T++  LI
Sbjct: 656 ESAKKLFDEMQCRGMTPDITAFTALI 681



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 183/385 (47%), Gaps = 26/385 (6%)

Query: 59  DRIKASPLKERID-------IFDSIKKDGTNWSVSD--------FNDLLMALVMLNEQET 103
           D +K   +  R+D       IFD +      WS  +        F+ L    V L   E 
Sbjct: 184 DTVKEVIMNSRMDMGFPVCNIFDML------WSTRNICVSGSGVFDVLFSVFVELGLLEE 237

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A + FS   ++   P + + + ++       +    RK  + M   G  P+V T+ ++++
Sbjct: 238 ANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMID 297

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LCK G L+ +  +  QM  +G  P++ TYN L+ G   VG +EE   +   +K+ G  P
Sbjct: 298 YLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVP 357

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D+ TY  +++ +CK  +   A E  +E    G+ PNVVT++TL + +CKEG     + L 
Sbjct: 358 DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLF 417

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M++   LP++ +Y++L++   K G +  A  +  +M++ G +++     +LL GLC  
Sbjct: 418 VDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLC-- 475

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   + +A +VF  M K     +   Y  ++    K ++ ++A+  L    E    P
Sbjct: 476 ---KAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP 532

Query: 404 RTITFNNVIQALCGEGKIDKALLLL 428
             I + ++I   C + K+++  L+L
Sbjct: 533 DLILYGSIIWGHCSQRKLEETKLIL 557



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 153/311 (49%), Gaps = 5/311 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E  ++F S+ KDG + +   +  L+   +     E A+K   + +   + P+  
Sbjct: 476 KAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLI 535

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +  +I  +C++    E + +++ M   G   N    T ++++  K+G+  +AL    +M
Sbjct: 536 LYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEM 595

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G +  I TY  L+ GLC  G VE A +    + + GL+P+V  YT+++DG CK    
Sbjct: 596 QDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCI 655

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A +L +E   RG+TP++  F  L +G  K G   + + L+  M +     D   Y++L
Sbjct: 656 ESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSL 715

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  + G++  A   F EM+  G   +E +   LLR      + ++  L++A ++  +M
Sbjct: 716 VSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR-----EYYKRGQLDEAIELKNEM 770

Query: 362 TKKVSVTDPGT 372
            +   +T+  T
Sbjct: 771 ERMGLITESAT 781



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 122/291 (41%), Gaps = 5/291 (1%)

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C      ++ L      +G +EEA E    ++N    P   +   ++    K G      
Sbjct: 215 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 274

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +  N+ I  G+ P+V T+N + +  CKEG       L   M++    PD ++Y++L++G 
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +    S+F EM   G   D    N L+   C     + + +  A++ F +M    
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYC-----KFEKMPRAFEYFSEMKNNG 389

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  TY  +I    K      A+         G +P   T+ ++I A C  G + +A 
Sbjct: 390 LKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 449

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            LL  M +     +  +Y  L+  L +  +  +A  ++ + LK G+ P ++
Sbjct: 450 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQ 500


>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
 gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
 gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
          Length = 583

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 210/428 (49%), Gaps = 13/428 (3%)

Query: 27  NKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKD-GTNWSV 85
           + L VF A   S    L +  +  S Q Q  V   ++    + + +FD +    G +   
Sbjct: 125 SALAVFTALHCS---PLSITPSAHSCQ-QIIVVLCRSGRQADALQLFDQMTTHYGYSPDA 180

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID- 144
              + L+ +    N  + +    S+AS +G    ++ ++ ++     +    +   + + 
Sbjct: 181 RFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFER 240

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            + D  Y P+V +F +++  +C+ G++++ALE++++M   GC P+  T+N L+ GLC   
Sbjct: 241 WIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTN 300

Query: 205 RVEEAYEMLMNVKNDGL-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            V   +E+L  ++ DG+  P+V T+T+V+ G+CK G+  +AM + N+ +  G+ PN VT+
Sbjct: 301 EVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTY 360

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N L NGY K G     V + + M +  C PD +++S+L++G  + G++  A+ I+ +M +
Sbjct: 361 NVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQ 420

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG-TYGIVIRTLGK 382
              + +    + ++  LC     +++  ++A  +  ++  +  +      Y  VI  L K
Sbjct: 421 HRIQPNVYTFSIIIHSLC-----KQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCK 475

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
             K DEA +      E G  P   T+  +I   C + +I +A++    M E    P   +
Sbjct: 476 CGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSIT 535

Query: 443 YDMLITKL 450
            +  I+ L
Sbjct: 536 VNCFISCL 543



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 190/395 (48%), Gaps = 11/395 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASS-YGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
           S      +++ L     Q  A++ F + ++ YG +P++   S ++      N    +  +
Sbjct: 143 SAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATL 202

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ--MGRIGCKPNIQTYNCLLKGL 200
           +    + G       +  L++SL   GR+ + + + ++    R+   P++ ++N ++KG+
Sbjct: 203 LSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVY-SPDVWSFNVVIKGV 261

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT-PN 259
           C VG+V++A E++  +   G  PD  T+  ++DG C+    +   E+L      GV  PN
Sbjct: 262 CRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 321

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VVTF ++ +GYCK G     + +   M     +P+ ++Y+ L+NG  K G +  AV +++
Sbjct: 322 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 381

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           +M R     D    +SL+ G C         L+DA +++  M +     +  T+ I+I +
Sbjct: 382 QMTRLRCPPDVVTFSSLIDGYC-----RCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 436

Query: 380 LGKGKKTDEALIHLHHA-IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
           L K  ++DEA+  L+   +     P+   +N VI  LC  GK+D+A L+   M E    P
Sbjct: 437 LCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 496

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            + +Y +LI       +  +A   +   ++ G  P
Sbjct: 497 DKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSP 531



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 155/308 (50%), Gaps = 10/308 (3%)

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
           WS   FN ++  +  + + + A++     + +G +P++ T +I++   C  N+     +V
Sbjct: 252 WS---FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEV 308

Query: 143 IDCMFDNGY-HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           +  +  +G   PNV TFT +++  CK+G+L++A+ V + M   G  PN  TYN L+ G  
Sbjct: 309 LRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 368

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
            VG +  A E+   +      PDV T+++++DG+C+ G+ ++A+ + ++  +  + PNV 
Sbjct: 369 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVY 428

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           TF+ + +  CK+    + +GLL  +  R +  P    Y+ +++ L K GK+  A  I K 
Sbjct: 429 TFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKG 488

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M   G   D+     L+ G CMKS      + +A   F +M +     D  T    I  L
Sbjct: 489 MEEKGCRPDKYTYTILIIGYCMKSR-----ISEAIMFFHEMVEAGCSPDSITVNCFISCL 543

Query: 381 GKGKKTDE 388
            K    +E
Sbjct: 544 LKAGMPNE 551



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 4/242 (1%)

Query: 71  DIFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++   +++DG    +V  F  ++       + E A+  +++  + G+ PN+ T++++I  
Sbjct: 307 EVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLING 366

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           Y    D   A +V   M      P+V TF+ L++  C+ G+L +AL +   M +   +PN
Sbjct: 367 YGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPN 426

Query: 190 IQTYNCLLKGLCYVGRVEEAYEML--MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           + T++ ++  LC   R +EA  +L  +N++ D + P  + Y  V+D  CK G+ +EA  +
Sbjct: 427 VYTFSIIIHSLCKQNRSDEAIGLLNELNLRPD-IAPQAFIYNPVIDVLCKCGKVDEANLI 485

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
                E+G  P+  T+  L  GYC +    + +     M +  C PD I+ +  ++ LLK
Sbjct: 486 RKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLK 545

Query: 308 WG 309
            G
Sbjct: 546 AG 547



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 1/216 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L++ + +++ +   G   +   +N L+     + +  +AV+ + + +     P+  
Sbjct: 334 KAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVV 393

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS +I  YC      +A ++   M  +   PNV TF+I+++SLCK  R  EA+ +L+++
Sbjct: 394 TFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNEL 453

Query: 182 G-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             R    P    YN ++  LC  G+V+EA  +   ++  G +PD YTYT ++ G+C   R
Sbjct: 454 NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSR 513

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            +EA+   +E +E G +P+ +T N   +   K G P
Sbjct: 514 ISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMP 549



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 1/191 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   ++++  + +      V  F+ L+       + + A++ +S+ + + + PN +
Sbjct: 369 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVY 428

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCM-FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           TFSI+I   C +N   EA  +++ +       P    +  +++ LCK G++ EA  +   
Sbjct: 429 TFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKG 488

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC+P+  TY  L+ G C   R+ EA      +   G  PD  T    +    K G 
Sbjct: 489 MEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 548

Query: 241 SNEAMELLNEA 251
            NE   ++  A
Sbjct: 549 PNEVDHVMRLA 559


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 178/362 (49%), Gaps = 11/362 (3%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + AV    E  S G +P+   ++++I   C K D     K++D MF  G  PN  T+  L
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTL 298

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ LC  G+L +A+ +L++M    C PN  TY  L+ GL    R  +   +L++++  G 
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGY 358

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           + + + Y+ ++ G  K G++ EAM L  +  E+G  PN+V ++ + +G C+EG P +   
Sbjct: 359 RLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKE 418

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +L  M    CLP+  +YS+L+ G  K G    A+ +++EM   G   +E   + L+ GLC
Sbjct: 419 ILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLC 478

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI---E 398
                    +++A  V+ KM       D   Y  +I+ L      D AL   H  +   E
Sbjct: 479 GVGR-----VKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEE 533

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
               P  +T+N ++  LC +  + +A+ LL  M +    P   + +   T L+ L +  D
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCN---TFLNTLSEKSD 590

Query: 459 AC 460
           +C
Sbjct: 591 SC 592



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 199/427 (46%), Gaps = 37/427 (8%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFF----SEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           SV  FN +L  ++        ++F+    +   +  ++PN  +F+++I+  C       A
Sbjct: 147 SVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRA 206

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            +V   M +    P+  T+  L++ LCK  R+ EA+ +LD+M   GC P+   YN L+ G
Sbjct: 207 IEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDG 266

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC  G +    +++ N+   G  P+  TY  ++ G C  G+ ++A+ LL   +     PN
Sbjct: 267 LCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPN 326

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VT+ TL NG  K+   M G  LL  M++R    ++  YS L++GL K GK   A++++K
Sbjct: 327 DVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWK 386

Query: 320 EMVRFGFEVDERMMNSLLRGLC------------------------------MKSWEEKD 349
           +M   G   +  + ++++ GLC                              MK + +  
Sbjct: 387 KMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTG 446

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
           L E+A QV+ +M +     +   Y ++I  L    +  EA++     + +G  P T+ ++
Sbjct: 447 LSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYS 506

Query: 410 NVIQALCGEGKIDKALLLLFLMY---EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           ++I+ LCG G +D AL L   M    E    P   +Y++L+  L   +    A  L    
Sbjct: 507 SMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCM 566

Query: 467 LKQGVIP 473
           L +G  P
Sbjct: 567 LDRGCDP 573



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 162/357 (45%), Gaps = 10/357 (2%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T S MI  Y N  DF    K++  +          +F ++  +  K+   ++A+++  +M
Sbjct: 79  TLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRM 138

Query: 182 -GRIGCKPNIQTYNCLLKGLCYVG---RVEEAYEMLMNVK-NDGLKPDVYTYTAVMDGFC 236
                CK +++++N +L  +   G   R  E Y+ ++N   N  + P+  ++  V+   C
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K+G  + A+E+     E+   P+  T+ TL +G CKE    + V LL  M+   C P  +
Sbjct: 199 KLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
            Y+ L++GL K G +     +   M   G   +E   N+L+ GLC+K       L+ A  
Sbjct: 259 IYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGK-----LDKAVS 313

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           + E+M     + +  TYG +I  L K ++  +    L    E G+      ++ +I  L 
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLF 373

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            EGK ++A+ L   M E    P+   Y  +I  L +  K  +A  +    +  G +P
Sbjct: 374 KEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLP 430



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 121/237 (51%), Gaps = 9/237 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    +E + ++  + + G   ++  ++ ++  L    +   A +  +   S G  PN +
Sbjct: 374 KEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVY 433

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +++ +       EA +V   M + G   N   +++L++ LC  GR+KEA+ V  +M
Sbjct: 434 TYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKM 493

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEA---YEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
             IG KP+   Y+ ++KGLC +G ++ A   Y  ++  +    +PDV TY  ++DG C  
Sbjct: 494 LTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQ 553

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGY------CKEGTPMKGVGLLKLMKKR 289
              + A++LLN  ++RG  P+V+T NT  N        C+EG       + +L+K++
Sbjct: 554 KDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQ 610



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 18/234 (7%)

Query: 262 TFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           +F  +F  Y K   P K V L  +++ +  C     S++++LN ++  G     +  +  
Sbjct: 114 SFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           +V     ++    N L   L +K+  +   ++ A +VF  M +K  + D  TY  ++  L
Sbjct: 174 VVNSNMNMNISP-NGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGL 232

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K ++ DEA++ L      G  P  + +N +I  LC +G + +   L+  M+     P+ 
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNE 292

Query: 441 TSYDMLI------TKLDQ----LEKSYDACAL-----YGAALKQGVIPQRKPQD 479
            +Y+ LI       KLD+    LE+   +  +     YG  L  G++ QR+  D
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYG-TLINGLVKQRRAMD 345


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 191/386 (49%), Gaps = 5/386 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   I++ + + G   SV  +N++++      + ++A   F E    GL PN  
Sbjct: 445 KEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLI 504

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S+++  Y  K D   A  + D M      P+  T  I++N LCK+GR  E+ + L ++
Sbjct: 505 TYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKL 564

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P   TYNC++ G    G V  A  +   +   G+ P+V+TYT +++GFCK    
Sbjct: 565 VQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNM 624

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+++++E   +G+  +V  +  L +G+C++G  +    LL  +++    P+K+ YS++
Sbjct: 625 DLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSM 684

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G  K   +  A+ + K M+  G   D ++  +L+ GL     +E  LL  A +++ +M
Sbjct: 685 ISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGL----LKEGKLLF-ASELYAEM 739

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K  + D  TY ++I  L    + + A   L         P    +N +I     EG +
Sbjct: 740 LAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNL 799

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI 447
            +A  L   M +   +P  T+YD+L+
Sbjct: 800 QEAFRLHNEMLDKGLVPDDTTYDILV 825



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 192/422 (45%), Gaps = 41/422 (9%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K + ++E  D+++ +   G     +  + ++ A +   + E A  +F EA + G+  ++
Sbjct: 200 VKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDA 259

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP--------------------------- 153
             +SI+I   C K D   A  ++  M D G+ P                           
Sbjct: 260 RAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGE 319

Query: 154 --------NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
                   NV   T L+   CK G L  ALE+ D+M   G  PN  TY  +++  C  G 
Sbjct: 320 MLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +++AYE+   +KN  + P V+   +++ G+ K     EA +L +EA+  G+  NV T+N+
Sbjct: 380 MDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNS 438

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +  CKEG   +   + + M ++   P  +SY+ ++ G  + G +  A  +F EM+  G
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKG 498

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            +      N +   + M  + +K   E A+ ++++M  +       T  I+I  L K  +
Sbjct: 499 LKP-----NLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGR 553

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           T E+   L   ++ G IP  +T+N +I     EG ++ AL +   M +    P+  +Y  
Sbjct: 554 TSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTN 613

Query: 446 LI 447
           LI
Sbjct: 614 LI 615



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 190/419 (45%), Gaps = 6/419 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA   +E   +FD     G   +V  +N LL  L    +   A   + +    G+ P+ 
Sbjct: 410 LKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSV 468

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++ MI  +C + D   A  V   M + G  PN+ T+++L++   K G  + A  + D+
Sbjct: 469 VSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDR 528

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M      P+  T N ++ GLC  GR  E+ + L  +  +G  P   TY  ++DGF K G 
Sbjct: 529 MRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGS 588

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            N A+ +  E  + GV+PNV T+  L NG+CK       + ++  MK +    D   Y  
Sbjct: 589 VNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCA 648

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G  + G +  A  +  E+   G   ++ + +S++ G     + +   +E A  + ++
Sbjct: 649 LIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISG-----FRKLQNMEAALHLHKR 703

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +    D   Y  +I  L K  K   A       +  G +P  IT++ +I  LC +G+
Sbjct: 704 MINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQ 763

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           ++ A  +L  M      P+   Y+ LIT   +     +A  L+   L +G++P     D
Sbjct: 764 LENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYD 822



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 139/278 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA    E  D    + ++G   +   +N ++   V      +A+  ++E    G++PN +
Sbjct: 550 KAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVF 609

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C  N+   A KV+D M + G   +VT +  L++  C+ G +  A ++L ++
Sbjct: 610 TYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSEL 669

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G  PN   Y+ ++ G   +  +E A  +   + N+G+  D+  YT ++ G  K G+ 
Sbjct: 670 QEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKL 729

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A EL  E + +G+ P+++T++ L +G C +G       +L+ M ++   P    Y+TL
Sbjct: 730 LFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTL 789

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + G  K G ++ A  +  EM+  G   D+   + L+ G
Sbjct: 790 ITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNG 827



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 166/387 (42%), Gaps = 8/387 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN LL + V       AV  F+      + P     +I +      N   EAR V + M 
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G   +  T ++++ +  + G+L+EA     +    G + + + Y+ +++ +C      
Sbjct: 217 SKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSV 276

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A  +L  +++ G  P    +T V+    K G+  EA+++  E +  G   NVV   TL 
Sbjct: 277 AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLM 336

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            GYCK+G     + L   M +    P+ ++Y+ ++    K G +  A  I+ +M      
Sbjct: 337 KGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDIS 396

Query: 328 VDERMMNSLLRG-LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
                +NSL+RG L  +S EE      A ++F++      + +  TY  ++  L K  K 
Sbjct: 397 PTVFNVNSLIRGYLKARSPEE------ASKLFDEAV-ACGIANVFTYNSLLSWLCKEGKM 449

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            EA       +  G  P  +++NN+I   C +G +D A  +   M E    P+  +Y +L
Sbjct: 450 SEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVL 509

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           +    +   +  A  LY     + + P
Sbjct: 510 MDGYFKKGDTEYAFGLYDRMRGENIAP 536



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 107/219 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K++ +   + + D +K  G    V+ +  L+       +   A +  SE    GL+PN  
Sbjct: 620 KSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKV 679

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +S MI  +    +   A  +   M + G   ++  +T L++ L K G+L  A E+  +M
Sbjct: 680 VYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEM 739

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ TY+ L+ GLC  G++E A ++L ++    + P V+ Y  ++ G  K G  
Sbjct: 740 LAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNL 799

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
            EA  L NE +++G+ P+  T++ L NG  K+G    G 
Sbjct: 800 QEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLFSGA 838



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 80/447 (17%), Positives = 172/447 (38%), Gaps = 93/447 (20%)

Query: 99  NEQETAVKFFSEASS-YGLAPNSWTFSIMIRCYCNKNDFF-EARKVIDCMFDNGYHPNVT 156
           N+ ++A+ +F+ AS   GL  +     +++       +   +AR +++    + + P   
Sbjct: 76  NDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDWGP--- 132

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
             +++V  L +S R            R+  + + + +N LL       R+ +A +   ++
Sbjct: 133 VPSVVVARLIESSR------------RLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSL 180

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT-------------- 262
               + P +      +    K     EA ++ N+   +GV  +  T              
Sbjct: 181 IEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKL 240

Query: 263 ---------------------FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
                                ++ +    CK+   +  +GLL+ M+ +  +P ++ ++ +
Sbjct: 241 EEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRV 300

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +   +K GK+  AV +  EM+  G  ++  +  +L++G C     ++  L+ A ++F+KM
Sbjct: 301 IGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYC-----KQGDLDSALELFDKM 355

Query: 362 TKKVSVTDPGTYGIV-----------------------------------IRTLGKGKKT 386
            +     +  TY ++                                   IR   K +  
Sbjct: 356 NENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSP 415

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           +EA      A+  G I    T+N+++  LC EGK+ +A  +   M      PS  SY+ +
Sbjct: 416 EEASKLFDEAVACG-IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNM 474

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I    Q      A  ++   L++G+ P
Sbjct: 475 ILGHCQQGDMDSANGVFVEMLEKGLKP 501


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 177/332 (53%), Gaps = 6/332 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V+ +N L+  L    ++E AV F  EAS  GL PN+ +++ +I+ YC   ++  A K++ 
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M + G  P++ T+ IL++ L  SG + +A+ +  ++   G  P+   YN L+ GLC  G
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R   A  +   + +  + PD Y Y  ++DGF + G  +EA ++ + ++E+GV  +VV  N
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN 524

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            +  G+C+ G   + +  +  M + + +PDK +YST+++G +K   +  A+ IF+ M + 
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKN 584

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             + +     SL+ G C +        + A + F++M  +  V +  TY  +IR+L K  
Sbjct: 585 KCKPNVVTYTSLINGFCCQG-----DFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639

Query: 385 KT-DEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            T ++A+ +    +    +P  +TFN ++Q  
Sbjct: 640 STLEKAVYYWELMMTNKCVPNEVTFNCLLQGF 671



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 40/411 (9%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK------ 141
           +N ++     L + E A   F E    G  P   TF  MI  +C + DF  + +      
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302

Query: 142 -------------VIDCMFDNGYH----------------PNVTTFTILVNSLCKSGRLK 172
                        +ID  + +GY                 P+V T+ IL+N LCK G+ +
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
            A+  LD+  + G  PN  +Y  L++  C     + A ++L+ +   G KPD+ TY  ++
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
            G    G  ++A+ +  + I+RGV+P+   +N L +G CK G  +    L   M  RN L
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL 482

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD   Y+TL++G ++ G    A  +F   V  G +VD    N++++G C        +L+
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC-----RSGMLD 537

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           +A     +M ++  V D  TY  +I    K +    A+    +  +    P  +T+ ++I
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
              C +G    A      M     +P+  +Y  LI  L +   + +    Y
Sbjct: 598 NGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 220/516 (42%), Gaps = 50/516 (9%)

Query: 1   MSSLVPSNSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAES----LD---LKENPRSLQ 53
           +S + P ++   +N+ R +    P+  KLV    + L T ++    LD     E  R + 
Sbjct: 6   LSRIKPLSNPHASNSFRSHLPITPRIKKLVSDTVSILKTQQNWSQILDDCFADEEVRFVD 65

Query: 54  AQRFV-DRIKASPLKERI-DIFDSIKKD---GTNWSVSDFNDLLMALVMLNEQETA---- 104
              FV DRI+   +  ++ D   S KKD      ++ S F  LL    + NE E      
Sbjct: 66  ISPFVFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNL 125

Query: 105 ----VKFFSEASSYGLAP--NSWTFSIMIRCY---------------CNK--------ND 135
               VK   EA S+ L     S + S  +  Y               CN           
Sbjct: 126 RNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRR 185

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             +ARKV D M D G   +  +  ILV  +C  G+++   ++++     GC PNI  YN 
Sbjct: 186 LGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNT 245

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           ++ G C +G +E AY +   +K  G  P + T+  +++GFCK G    +  LL+E  ERG
Sbjct: 246 IIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERG 305

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           +  +V   N + +   + G  +     +  +   +C PD  +Y+ L+N L K GK   AV
Sbjct: 306 LRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAV 365

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
               E  + G   +      L++  C    +E D+   A ++  +M ++    D  TYGI
Sbjct: 366 GFLDEASKKGLIPNNLSYAPLIQAYCKS--KEYDI---ASKLLLQMAERGCKPDIVTYGI 420

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I  L      D+A+      I+ G  P    +N ++  LC  G+   A LL   M +  
Sbjct: 421 LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN 480

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
            +P    Y  LI    +     +A  ++  ++++GV
Sbjct: 481 ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 127/266 (47%), Gaps = 1/266 (0%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    +  +  L+  LV+    + AV    +    G++P++  +++++   C    F  A
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
           + +   M D    P+   +  L++   +SG   EA +V       G K ++  +N ++KG
Sbjct: 470 KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKG 529

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C  G ++EA   +  +  + L PD +TY+ ++DG+ K      A+++     +    PN
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK-IRPAVSIF 318
           VVT+ +L NG+C +G         K M+ R+ +P+ ++Y+TL+  L K    +  AV  +
Sbjct: 590 VVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYW 649

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKS 344
           + M+      +E   N LL+G   K+
Sbjct: 650 ELMMTNKCVPNEVTFNCLLQGFVKKT 675



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 165/390 (42%), Gaps = 29/390 (7%)

Query: 98  LNEQETAVKFFSEASSYG---LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPN 154
           + + E  VK F   SS        N +  S  ++       F E   V+  + +      
Sbjct: 74  IQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLT 133

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRI-GCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
               + ++++  +SG L +A+E+ D +  +    P++   N LL  L    R+ +A ++ 
Sbjct: 134 HEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVY 193

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             + + G   D Y+   ++ G C  G+     +L+     +G  PN+V +NT+  GYCK 
Sbjct: 194 DEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKL 253

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G       + K +K +  +P   ++ T++NG  K G                F   +R++
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGD---------------FVASDRLL 298

Query: 334 NSLL-RGLCMKSWEEKDLLEDAYQVFEKMTKKVSV---------TDPGTYGIVIRTLGKG 383
           + +  RGL +  W   ++++  Y+   K+    S+          D  TY I+I  L K 
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKE 358

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            K + A+  L  A + G IP  +++  +IQA C   + D A  LL  M E    P   +Y
Sbjct: 359 GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +LI  L       DA  +    + +GV P
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSP 448



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 137/359 (38%), Gaps = 29/359 (8%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           F  A L  +E LD    P +      +D  I++    E   +F    + G    V   N 
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           ++         + A+   +  +   L P+ +T+S +I  Y  + D   A K+   M  N 
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA- 209
             PNV T+T L+N  C  G  K A E   +M      PN+ TY  L++ L       E  
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645

Query: 210 ---YEMLMNVKNDGLKPDVYTYTAVMDGFCKV--------------GRSNEAMELLNEAI 252
              +E++M  K     P+  T+  ++ GF K               G+S+   E  +   
Sbjct: 646 VYYWELMMTNK---CVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMK 702

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
             G + +   +N+     C  G           M K+   PD +S++ +L+G    G  +
Sbjct: 703 SDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSK 762

Query: 313 PAVSI-FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
              ++ F  +   G EV  R    L + L       + ++ +A  +   M +K    +P
Sbjct: 763 QWRNMDFCNLGEKGLEVAVRYSQVLEQHL------PQPVICEASTILHAMVEKADTKEP 815


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 200/416 (48%), Gaps = 11/416 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   +++ ++IF  +   G N SV   N +L ++V   E  +   F  E     + P+ 
Sbjct: 134 LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDV 193

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+I+I   C +  F ++  ++  M  +GY P + T+  +++  CK GR K A+E+LD 
Sbjct: 194 ATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G   ++ TYN L+  LC   R  + Y +L +++   + P+  TY  +++GF   G+
Sbjct: 254 MNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGK 313

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
              A +LLNE +  G++PN VTFN L +G+  EG   + + +  +M+ +  +  ++SY  
Sbjct: 314 VLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGV 373

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LL+GL K  +   A   +  M R G  V       ++ GLC     +   L++A  +  +
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC-----KNGFLDEAVVMLNE 428

Query: 361 MTKKVSVTDPGTYGIVIR---TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           M+K     D  TY  +I     +G+ K   E +  ++    +G  P  I ++ +I   C 
Sbjct: 429 MSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIY---RVGLSPNGIIYSTLIYNCCR 485

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            G + + + +   M      P   ++++L+T L +  K  +A          G++P
Sbjct: 486 MGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 205/473 (43%), Gaps = 44/473 (9%)

Query: 41  ESLDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E L    +P  +     +D  I     KE + +F  ++  G   +   +  LL  L    
Sbjct: 323 EMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNA 382

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF-EARKVIDCMFDNGYHPNVTTF 158
           E + A  F+      G+     T++ MI   C KN F  EA  +++ M  +G  P++ T+
Sbjct: 383 EFDLARGFYMRMKRNGVCVGRITYTGMIDGLC-KNGFLDEAVVMLNEMSKDGIDPDIVTY 441

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
           + L+N  C+ GRLK A E++ ++ R+G  PN   Y+ L+   C +G ++E   +   +  
Sbjct: 442 SALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMIL 501

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +G  PD +T+  ++   CK G+  EA E +      G+ PN V+F+ L NGY   G  +K
Sbjct: 502 EGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLK 561

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              +   M K    P   +Y +LL GL K G +  A    K +      VD  M N+L+ 
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLIT 621

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
            +C     +   L+ A  +F +M ++  + D  TY  +I  L +  KT  A++    A  
Sbjct: 622 AMC-----KSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 399 MGH-IPR-----------------------------------TITFNNVIQALCGEGKID 422
            G+ +P                                     +T N +I      GKI+
Sbjct: 677 RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           K   LLF M    + P+ T+Y++L+    + +    +  LY + +  G++P +
Sbjct: 737 KTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDK 789



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 194/445 (43%), Gaps = 31/445 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    K  I++ D +   G N  V  +N L+  L   N          +     + PN  
Sbjct: 240 KKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEV 299

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  + N+     AR++++ M   G  PN  TF  L++     G  KEAL++   M
Sbjct: 300 TYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMM 359

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G      +Y  LL GLC     + A    M +K +G+     TYT ++DG CK G  
Sbjct: 360 EAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA+ +LNE  + G+ P++VT++ L NG+C+ G       ++  + +    P+ I YSTL
Sbjct: 420 DEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTL 479

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-----------MKSWEEKDL 350
           +    + G ++  + I++ M+  G   D    N L+  LC           M+      +
Sbjct: 480 IYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539

Query: 351 LEDA-------------------YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
           L +A                   + VF++MTK        TYG +++ L KG     A  
Sbjct: 540 LPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEK 599

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            L     +     T+  N +I A+C  G +DKA+ L   M + + +P   +Y  LI+ L 
Sbjct: 600 FLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLC 659

Query: 452 QLEKSYDACALYGAALKQG-VIPQR 475
           +  K+  A      A  +G ++P +
Sbjct: 660 RKGKTVIAILFAKEAEARGNLVPNK 684



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 185/381 (48%), Gaps = 11/381 (2%)

Query: 98  LNEQETAVKFFSEASSYGLA-PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
           L   +++  F +  ++Y L   N   F I+IR Y  +    ++ ++   M   G++P+V 
Sbjct: 100 LMSGKSSFVFGALMATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY 159

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           T   ++ S+ KS         L +M +    P++ T+N L+  LC  G  +++  ++  +
Sbjct: 160 TCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKM 219

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           +  G  P + TY  V+  +CK GR   A+ELL+    +GV  +V T+N L +  C+    
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRS 279

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            KG  LL+ M+KR   P++++Y+TLLNG    GK+  A  +  EM+ FG   +    N+L
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNAL 339

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           + G       E +  ++A ++F  M  K  +    +YG+++  L K  + D A       
Sbjct: 340 IDG----HISEGN-FKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRM 394

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT---KLDQL 453
              G     IT+  +I  LC  G +D+A+++L  M +    P   +Y  LI    ++ +L
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRL 454

Query: 454 EKSYD-ACALYGAALK-QGVI 472
           + + +  C +Y   L   G+I
Sbjct: 455 KTAKEIVCRIYRVGLSPNGII 475



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/398 (22%), Positives = 173/398 (43%), Gaps = 41/398 (10%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+ +TF++++   C      EA + + CM  +G  PN  +F  L+N    SG   +A
Sbjct: 503 GNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKA 562

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
             V D+M ++G  P   TY  LLKGLC  G +  A + L +++N     D      ++  
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITA 622

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLP 293
            CK G  ++A+ L  E ++R + P+  T+ +L +G C++G  +  +   K  + R N +P
Sbjct: 623 MCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVP 682

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           +K+ Y+  ++G+ K G+ +      ++M + G   D    N+++ G     +     +E 
Sbjct: 683 NKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDG-----YSRMGKIEK 737

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT------ 407
            + +  +M  +    +  TY I++    K K    + +     I  G +P  +T      
Sbjct: 738 THDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIIL 797

Query: 408 -----------------------------FNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
                                        FN +I   C  G+I+ A  ++ +M       
Sbjct: 798 GICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISL 857

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            + + D +++ L++  +  ++  +     KQG+ P+ +
Sbjct: 858 DKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESR 895



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/482 (22%), Positives = 190/482 (39%), Gaps = 82/482 (17%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LKE I I++++  +G       FN L+ +L    +   A +F    +S G+ PN+ +F  
Sbjct: 489 LKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDC 548

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF--------------------------- 158
           +I  Y +  +  +A  V D M   G+HP   T+                           
Sbjct: 549 LINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVP 608

Query: 159 ----TILVNSL----CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV---- 206
               T++ N+L    CKSG L +A+ +  +M +    P+  TY  L+ GLC  G+     
Sbjct: 609 AAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAI 668

Query: 207 --------------------------------EEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
                                           +  +     +   GL  DV T  A++DG
Sbjct: 669 LFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDG 728

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           + ++G+  +  +LL E   +   PN+ T+N L +GY K         L + M     LPD
Sbjct: 729 YSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPD 788

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK---SWEEKDLL 351
           K++  +++ G+ +   +   + I K  +  G EVD    N L+   C     +W      
Sbjct: 789 KLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINW------ 842

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
             A+ +   MT      D  T   ++  L +  +  E+ + LH   + G  P +  +  +
Sbjct: 843 --AFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 900

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           +  LC  G I  A ++   M  H   P   +   ++  L +  K+ +A  L  + LK  +
Sbjct: 901 LNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKL 960

Query: 472 IP 473
           +P
Sbjct: 961 VP 962



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 165/403 (40%), Gaps = 51/403 (12%)

Query: 89   NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
            N L+ A+      + AV  F E     + P+S+T++ +I   C K      + VI  +F 
Sbjct: 617  NTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRK-----GKTVIAILFA 671

Query: 149  NGYH------PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
                      PN   +T  V+ + K+G+ K       QM ++G   ++ T N ++ G   
Sbjct: 672  KEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSR 731

Query: 203  VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            +G++E+ +++L  + N    P++ TY  ++ G+ K    + +  L    I  G+ P+ +T
Sbjct: 732  MGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLT 791

Query: 263  FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL-----NGLLKWG-------- 309
              ++  G C+      G+ +LK    R    D+ +++ L+     NG + W         
Sbjct: 792  CYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMT 851

Query: 310  ----------------------KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
                                  + + +  +  EM + G   + R    LL GLC      
Sbjct: 852  SLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLC-----R 906

Query: 348  KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
               ++ A+ V E+M              ++R L K  K DEA + L   ++M  +P   +
Sbjct: 907  VGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIAS 966

Query: 408  FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            F  ++   C  G + +AL L  +M          SY++LIT L
Sbjct: 967  FTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGL 1009



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 121/256 (47%)

Query: 91   LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
            +++ +   N  E  +K        G+  +  TF+++I   C   +   A  +++ M   G
Sbjct: 795  IILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLG 854

Query: 151  YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
               +  T   +V+ L ++ R +E+  VL +M + G  P  + Y  LL GLC VG ++ A+
Sbjct: 855  ISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAF 914

Query: 211  EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
             +   +    + P     +A++    K G+++EA  LL   ++  + P + +F TL + +
Sbjct: 915  VVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLF 974

Query: 271  CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
            CK G   + + L  +M       D +SY+ L+ GL   G +  A  +F+EM R GF  + 
Sbjct: 975  CKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANV 1034

Query: 331  RMMNSLLRGLCMKSWE 346
                +L+ G+  +  E
Sbjct: 1035 TTYKALVGGILSQGTE 1050



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 144/330 (43%), Gaps = 7/330 (2%)

Query: 84   SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
            +++ +N LL          T+   +      G+ P+  T   +I   C  N      K++
Sbjct: 753  NLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKIL 812

Query: 144  DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
                  G   +  TF +L++  C +G +  A ++++ M  +G   +  T + ++  L   
Sbjct: 813  KAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRN 872

Query: 204  GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
             R +E+  +L  +   G+ P+   Y  +++G C+VG    A  +  E I   + P  V  
Sbjct: 873  HRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932

Query: 264  NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
            + +     K G   +   LL+ M K   +P   S++TL++   K G +  A+ +   M  
Sbjct: 933  SAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSN 992

Query: 324  FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY-GIVIRTLGK 382
             G ++D    N L+ GLC K       +  A+++FE+M +   + +  TY  +V   L +
Sbjct: 993  CGLKLDLVSYNVLITGLCAKGD-----MAIAFELFEEMKRDGFLANVTTYKALVGGILSQ 1047

Query: 383  GKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            G +     I L   +  G I   ++FN++I
Sbjct: 1048 GTEFSGTDIILKDLLARGFIT-AMSFNHMI 1076



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 6/200 (3%)

Query: 72   IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY- 130
            +   + K G +     +  LL  L  + + +TA     E  ++ + P +   S M+R   
Sbjct: 881  VLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 940

Query: 131  -CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
             C K D  EA  ++  M      P + +FT L++  CK+G + EALE+   M   G K +
Sbjct: 941  KCGKAD--EASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLD 998

Query: 190  IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME-LL 248
            + +YN L+ GLC  G +  A+E+   +K DG   +V TY A++ G    G      + +L
Sbjct: 999  LVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIIL 1058

Query: 249  NEAIERGVTPNVVTFNTLFN 268
             + + RG     ++FN + N
Sbjct: 1059 KDLLARGFI-TAMSFNHMIN 1077


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 206/408 (50%), Gaps = 13/408 (3%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRC 129
           ++FD + K G + +V  FN L+    +  + E A+       S + + P++ T++ +++ 
Sbjct: 190 EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKA 249

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
              K    + ++++  M  NG  PN  T+  LV   CK G LKEA ++++ M +    P+
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD 309

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TYN L+ GLC  G + E  E++  +K+  L+PDV TY  ++DG  ++G S EA +L+ 
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK-LMKKRNCLPDKISYSTLLNGLLKW 308
           +    GV  N VT N      CKE         +K L+      PD ++Y TL+   LK 
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G +  A+ + +EM + G +++   +N++L  LC     ++  L++A+ +     K+  + 
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALC-----KERKLDEAHNLLNSAHKRGFIV 484

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  TYG +I    + +K ++AL       ++   P   TFN++I  LC  GK + A+   
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544

Query: 429 FLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYGAALKQGVIP 473
             + E   +P  ++++ +I    K  ++EK+++    Y  ++K    P
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFE---FYNESIKHSFKP 589



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 185/402 (46%), Gaps = 67/402 (16%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL PN  T++ ++  YC      EA ++++ M      P++ T+ IL+N LC +G ++E 
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK------------ 222
           LE++D M  +  +P++ TYN L+ G   +G   EA +++  ++NDG+K            
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKW 389

Query: 223 ------------------------PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
                                   PD+ TY  ++  + KVG  + A+E++ E  ++G+  
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           N +T NT+ +  CKE    +   LL    KR  + D+++Y TL+ G  +  K+  A+ ++
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509

Query: 319 KEMVRFGFEVDERMMNSLLRGLC--------MKSWEE----------------------K 348
            EM +          NSL+ GLC        M+ ++E                      +
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             +E A++ + +  K     D  T  I++  L K   T++AL   +  IE   +  T+T+
Sbjct: 570 GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTY 628

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           N +I A C + K+ +A  LL  M E    P R +Y+  I+ L
Sbjct: 629 NTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 177/368 (48%), Gaps = 9/368 (2%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  ++E +++ D++K       V  +N L+     L     A K   +  + G+  N  T
Sbjct: 323 AGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVT 382

Query: 123 FSIMIRCYCNKNDFFEA--RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +I ++  C K +  EA  RKV + +  +G+ P++ T+  L+ +  K G L  ALE++ +
Sbjct: 383 HNISLKWLC-KEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           MG+ G K N  T N +L  LC   +++EA+ +L +    G   D  TY  ++ GF +  +
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A+E+ +E  +  +TP V TFN+L  G C  G     +     + +   LPD  ++++
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++ G  K G++  A   + E ++  F+ D    N LL GLC +   EK     A   F  
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK-----ALNFFNT 616

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           + ++  V D  TY  +I    K KK  EA   L    E G  P   T+N+ I  L  +GK
Sbjct: 617 LIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675

Query: 421 IDKALLLL 428
           + +   LL
Sbjct: 676 LSETDELL 683



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 201/434 (46%), Gaps = 8/434 (1%)

Query: 44  DLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQE 102
           + K NP ++     +  + K   L +  ++   +KK+G   +   +N+L+     L   +
Sbjct: 233 EFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK 292

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
            A +         + P+  T++I+I   CN     E  +++D M      P+V T+  L+
Sbjct: 293 EAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGL 221
           +   + G   EA ++++QM   G K N  T+N  LK LC   + E     +   V   G 
Sbjct: 353 DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGF 412

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PD+ TY  ++  + KVG  + A+E++ E  ++G+  N +T NT+ +  CKE    +   
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           LL    KR  + D+++Y TL+ G  +  K+  A+ ++ EM +          NSL+ GLC
Sbjct: 473 LLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                E      A + F+++ +   + D  T+  +I    K  + ++A    + +I+   
Sbjct: 533 HHGKTEL-----AMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSF 587

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P   T N ++  LC EG  +KAL     + E  ++ + T Y+ +I+   + +K  +A  
Sbjct: 588 KPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVT-YNTMISAFCKDKKLKEAYD 646

Query: 462 LYGAALKQGVIPQR 475
           L     ++G+ P R
Sbjct: 647 LLSEMEEKGLEPDR 660



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 178/392 (45%), Gaps = 37/392 (9%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK---SGRLKEA 174
           P+   F I +  Y ++     A ++   M      PN+ T   L+  L +   S  +  A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMD 233
            EV D M +IG   N+QT+N L+ G C  G++E+A  ML  + ++  + PD  TY  ++ 
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
              K GR ++  ELL +  + G+ PN VT+N L  GYCK G+  +   +++LMK+ N LP
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK---SWEEKDL 350
           D  +Y+ L+NGL   G +R  + +   M     + D    N+L+ G C +   S E + L
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKL 367

Query: 351 LED-------AYQVF--------------EKMTKKVS--------VTDPGTYGIVIRTLG 381
           +E        A QV               E +T+KV           D  TY  +I+   
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K      AL  +    + G    TIT N ++ ALC E K+D+A  LL   ++   I    
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +Y  LI    + EK   A  ++    K  + P
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 131/267 (49%), Gaps = 4/267 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L   +++   + + G   +    N +L AL    + + A    + A   G   + 
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+  +I  +  +    +A ++ D M      P V+TF  L+  LC  G+ + A+E  D+
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           +   G  P+  T+N ++ G C  GRVE+A+E          KPD YT   +++G CK G 
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606

Query: 241 SNEAMELLNEAI-ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           + +A+   N  I ER V  + VT+NT+ + +CK+    +   LL  M+++   PD+ +Y+
Sbjct: 607 TEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664

Query: 300 TLLNGLLKWGKIRPAVSIFKEMV-RFG 325
           + ++ L++ GK+     + K+   +FG
Sbjct: 665 SFISLLMEDGKLSETDELLKKFSGKFG 691



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 9/208 (4%)

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           LL+  +     P+   F+   + Y  EG P   + + + M +    P+ ++ +TLL GL+
Sbjct: 118 LLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV 177

Query: 307 KWG---KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           ++     I  A  +F +MV+ G  ++ +  N L+ G C++       LEDA  + E+M  
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK-----LEDALGMLERMVS 232

Query: 364 KVSVT-DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +  V  D  TY  +++ + K  +  +    L    + G +P  +T+NN++   C  G + 
Sbjct: 233 EFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK 292

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +A  ++ LM +   +P   +Y++LI  L
Sbjct: 293 EAFQIVELMKQTNVLPDLCTYNILINGL 320


>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
 gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 202/460 (43%), Gaps = 36/460 (7%)

Query: 50  RSLQAQRFVDR------IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET 103
           RSL   R   R      +KA  + + +  FD + K        D+N  +  LV  +  + 
Sbjct: 3   RSLGRHRLAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDL 62

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A +++      G + NS+T+S  I   C   +F    K+++ M   GY P++  + I +N
Sbjct: 63  AEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLN 122

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LC   +L  AL V+  M   G +P+I TY  ++ GLC  GR + A E+  N+   G  P
Sbjct: 123 LLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSP 182

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D     A++ G C  G+ + A EL   A+   +  +   +N+L NG+C+ G   K   ++
Sbjct: 183 DEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSII 242

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-- 341
             M++  C PD ++Y+ LLN       +  A ++ K+M R G E D    N LL+GLC  
Sbjct: 243 SFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKA 302

Query: 342 ----------MKSWEEKDLLE------------------DAYQVFEKMTKKVSVTDPGTY 373
                     +   E K L +                   AY++FE+M  K    D  T+
Sbjct: 303 NRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTF 362

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
            I+I+   +   ++ A   L     +G +P  + +  ++  LC  GK+  A  +   M E
Sbjct: 363 TILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVE 422

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               P   SY+ LI  L +  +  +A  LY      G  P
Sbjct: 423 SGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCP 462



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 141/278 (50%), Gaps = 5/278 (1%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  +C      +A+ +I  M  NG  P++ T+ +L+N  C    L+EA  ++ +M 
Sbjct: 222 YNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKME 281

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           R G +P++ +YN LLKGLC   R+++AY M++N        DV +Y  ++   C    + 
Sbjct: 282 RSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTK 341

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
            A +L  E   +G+TP+VVTF  L   + +EG+      LL  M     LPD++ Y+T++
Sbjct: 342 RAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIV 401

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           + L K GK+  A S+F +MV  G   D    N+L+ GLC  S      + +A  ++E M 
Sbjct: 402 DHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRAS-----RVSEAMHLYEDMH 456

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
                 D  T+ ++I  L   KK   A       +E G
Sbjct: 457 TGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKG 494



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 117/226 (51%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+ P+ ++++ +++  C  N   +A  ++    +     +V ++  ++ +LC +   K A
Sbjct: 284 GVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRA 343

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            ++ ++MG  G  P++ T+  L+K     G    A ++L  +   GL PD   YT ++D 
Sbjct: 344 YKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDH 403

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK G+   A  +  + +E G+TP+VV++N L NG C+     + + L + M      PD
Sbjct: 404 LCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPD 463

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           ++++  ++ GL+   K+  A  ++ +M+  GF +D  +  +L+  +
Sbjct: 464 EVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAI 509



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 4/182 (2%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           AS  K    +F+ +   G    V  F  L+ A +       A K   + +  GL P+   
Sbjct: 337 ASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVL 396

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ ++   C       A  V   M ++G  P+V ++  L+N LC++ R+ EA+ + + M 
Sbjct: 397 YTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMH 456

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G  P+  T+  ++ GL +  ++  A  +   +   G   D     AV +       SN
Sbjct: 457 TGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLD----GAVSETLVNAIHSN 512

Query: 243 EA 244
           +A
Sbjct: 513 DA 514



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 80/187 (42%), Gaps = 13/187 (6%)

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFG---FEVD-ERMMNSLLRGLCMKSWEEKDL 350
           +++Y   ++  +K G I  A+  F EM +     F +D  R +  L+R         +  
Sbjct: 9   RLAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVR---------QSR 59

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
            + A Q +++M  +    +  TY   I  L K K        L     +G++P    +N 
Sbjct: 60  FDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNI 119

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
            +  LC E ++D AL ++  M E  + P   +Y ++I  L +  +   A  ++   +++G
Sbjct: 120 YLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKG 179

Query: 471 VIPQRKP 477
             P  K 
Sbjct: 180 FSPDEKA 186


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 173/355 (48%), Gaps = 34/355 (9%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G++P ++TF+++I   C+     +AR++ D M + G  PN  +F ILV   C++G   + 
Sbjct: 51  GVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKG 110

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           LE+L +M R+G  PN   YN L+   C  G+ ++A +++  ++ DGL PDV T+ A +  
Sbjct: 111 LELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISA 170

Query: 235 FCKVGRSNEAMELLNEAIERGV----TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
            C  G+  EA  +  +     V     PN++T+N +  G+CKEG   +   L + MK   
Sbjct: 171 LCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSE 230

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------- 341
            L ++ SY+  L GL++ GK+  A  + KEMV  G E +    N ++ GLC         
Sbjct: 231 NLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDAR 290

Query: 342 --MKSWEEKDLLED-------------------AYQVFEKMTKKVSVTDPGTYGIVIRTL 380
             M+      +L D                   A  V  +M +     +  T  I++ +L
Sbjct: 291 MLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSL 350

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
            K  +  EA   L    E G++  T+T N VI  LC  GK+DKA+ ++  M+ H 
Sbjct: 351 WKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHG 405



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 211/467 (45%), Gaps = 73/467 (15%)

Query: 47  ENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVS----DFNDLLMALVMLNEQE 102
           ENP S+     +  +++   + R+D    + KD     VS     FN L+  L      +
Sbjct: 16  ENPPSIYLYNVL--LRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLD 73

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
            A + F +    G  PN ++F I++R YC      +  +++  M   G+ PN   +  L+
Sbjct: 74  DARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLI 133

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND--- 219
           +S CK G+  +A +++D+M + G  P++ T+N  +  LC  G+V EA  +  +++ D   
Sbjct: 134 SSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVL 193

Query: 220 GL-KPDVYTYTAVMDGFCK-----------------------------------VGRSNE 243
           GL +P++ TY  ++ GFCK                                   +G+  E
Sbjct: 194 GLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLE 253

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A  +L E ++ G+ PNV ++N + +G CK G       L++LM     LPD ++Y+TLL+
Sbjct: 254 AQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLH 313

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           G    GK+  A ++ +EM+R G   +    N LL  L    W+E  + E A ++ +KM +
Sbjct: 314 GYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSL----WKEGRISE-AEELLQKMNE 368

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEAL-----IHLHHAIEMGHI---------------- 402
           K  V D  T  IVI  L    K D+A+     +  H +  +G++                
Sbjct: 369 KGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKK 428

Query: 403 --PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             P  I+++ +I  LC  G++ +A      M      P    YD+ I
Sbjct: 429 CMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFI 475



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 182/387 (47%), Gaps = 19/387 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E   +F+ +K      +   +N  L+ LV + +   A     E    G+ PN +
Sbjct: 212 KEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVY 271

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I++   C     F+AR ++  M  +G  P+  T+T L++  C +G++ EA  VL +M
Sbjct: 272 SYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREM 331

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R GC PN  T N LL  L   GR+ EA E+L  +   G   D  T   V+DG C  G+ 
Sbjct: 332 MRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKL 391

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYST 300
           ++A+E++N     G          L N Y         +GL+     R  C+PD ISYST
Sbjct: 392 DKAIEIVNGMWTHGSA----ALGNLGNSY---------IGLVDDSDSRKKCMPDLISYST 438

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++GL K G++  A   F EM+    + D  + +  +   C     ++  +  A++V + 
Sbjct: 439 IISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFC-----KEGKISSAFRVLKD 493

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M KK       TY  +I  LG   +  E    +    E G  P    +NNV+ +LC  G+
Sbjct: 494 MEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGR 553

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +  A  +L  M +    P+ +S+ +LI
Sbjct: 554 VKDAPSVLDEMLQKGISPNISSFSILI 580



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 161/330 (48%), Gaps = 19/330 (5%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  + +L+ S  K GR+     +   M   G  P   T+N L+  LC  G +++A E+
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G +P+ Y++  ++ G+C+ G +++ +ELL E    G +PN V +NTL + +CK
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
           EG       L+  M+K    PD ++++  ++ L   GK+  A  IF++M     ++DE +
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDM-----QIDEVL 193

Query: 333 ---------MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                     N +L G C     ++ +LE+A  +FEKM    ++ +  +Y I +  L + 
Sbjct: 194 GLPQPNIITYNLMLGGFC-----KEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRI 248

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            K  EA + L   ++MG  P   ++N V+  LC  G +  A +L+ LM     +P   +Y
Sbjct: 249 GKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTY 308

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
             L+       K  +A  +    ++ G  P
Sbjct: 309 TTLLHGYCHTGKVSEANNVLREMMRDGCSP 338



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 130/272 (47%), Gaps = 6/272 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+  ++S +I   C      EA+K    M      P+   + + ++S CK G++  A  V
Sbjct: 431 PDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRV 490

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L  M + GC   +QTYN L+ GL    ++ E Y ++  ++  G+ PDV  Y  V+   C+
Sbjct: 491 LKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCE 550

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            GR  +A  +L+E +++G++PN+ +F+ L   +CK       V  +  +    C   +  
Sbjct: 551 GGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCK-ACDFSAVDEIFEIALNVCGHKEAL 609

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           YS   N LL  G++  A  +F+  +   F+V   +   L+  LC     + + L+DA  +
Sbjct: 610 YSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLC-----KDEKLDDASGI 664

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
             K+  K    DP ++  VI  LGK     EA
Sbjct: 665 LHKLIDKGYWFDPASFMPVIDGLGKRGNKHEA 696



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 156/333 (46%), Gaps = 29/333 (8%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G +PN++T +I++     +    EA +++  M + GY  +  T  I+++ LC +G+L +A
Sbjct: 335 GCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKA 394

Query: 175 LEVLDQM--------GRIG---------------CKPNIQTYNCLLKGLCYVGRVEEAYE 211
           +E+++ M        G +G               C P++ +Y+ ++ GLC  GRV EA +
Sbjct: 395 IEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKK 454

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
             + +    L+PD   Y   +  FCK G+ + A  +L +  ++G    + T+N+L  G  
Sbjct: 455 KFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLG 514

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
            +    +  GL+  M++R   PD   Y+ +L+ L + G+++ A S+  EM++ G   +  
Sbjct: 515 SKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNIS 574

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             + L++  C K+ +         ++FE +   V       Y +    L  G +  +A  
Sbjct: 575 SFSILIKAFC-KACD----FSAVDEIFE-IALNVCGHKEALYSLTFNELLVGGEVVKAKE 628

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               A++         + ++I  LC + K+D A
Sbjct: 629 LFETALDRSFDVGNFLYKDLIDHLCKDEKLDDA 661



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 11/230 (4%)

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
           +A +   +    G      T++ +I    +KN  FE   +ID M + G  P+V+ +  ++
Sbjct: 486 SAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVL 545

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV---GRVEEAYEMLMNVKND 219
           +SLC+ GR+K+A  VLD+M + G  PNI +++ L+K  C       V+E +E+ +NV   
Sbjct: 546 SSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVC-- 603

Query: 220 GLKPDVY--TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           G K  +Y  T+  ++ G    G   +A EL   A++R        +  L +  CK+    
Sbjct: 604 GHKEALYSLTFNELLVG----GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLD 659

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              G+L  +  +    D  S+  +++GL K G    A  + ++M+    E
Sbjct: 660 DASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMASE 709



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 7/216 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +     +   ++K G N ++  +N L+M L   N+         E    G++P+  
Sbjct: 480 KEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVS 539

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD-Q 180
            ++ ++   C      +A  V+D M   G  PN+++F+IL+ + CK+       E+ +  
Sbjct: 540 IYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIA 599

Query: 181 MGRIGCKPNIQ--TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           +   G K  +   T+N LL G    G V +A E+     +       + Y  ++D  CK 
Sbjct: 600 LNVCGHKEALYSLTFNELLVG----GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKD 655

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            + ++A  +L++ I++G   +  +F  + +G  K G
Sbjct: 656 EKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRG 691


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 201/467 (43%), Gaps = 65/467 (13%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ +++     +   +N ++  L      E A  F  E   YGL+P+++T+  ++   C
Sbjct: 265 VFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLC 324

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             +   EA+ ++D M  +G  PN+  +  LV+   K G+  EA ++L +M   G +PN  
Sbjct: 325 KGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKI 384

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM------------------- 232
            Y+ L++GLC +G++  A ++L  +   GL+PD +TY  +M                   
Sbjct: 385 MYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM 444

Query: 233 ----------------DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
                           +G C+ G S EA  LL E I  G+ PN   +  L  G+ KEG  
Sbjct: 445 RNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNI 504

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                 L+ M K N  PD   Y++L+ GL   G++  A   + ++ + G   DE   + L
Sbjct: 505 SLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGL 564

Query: 337 LRGLCMKSWEEK---------------------DLLEDAYQ---------VFEKMTKKVS 366
           + G C     EK                     DLLE  ++         + + M     
Sbjct: 565 IHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             D   YGIVIR L + +  + A + L    + G +P    ++++I  LC    ++KA+ 
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           LL  M +    P    Y+ LI    +      A  ++ + L +G++P
Sbjct: 685 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVP 731



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 169/346 (48%), Gaps = 5/346 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A K F E      A N  T+++MI   C      EA    + M D G  P+  T+  L
Sbjct: 260 DAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGAL 319

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +N LCK  RLKEA  +LD+M   G KPNI  Y  L+ G    G+  EA+++L  + + G+
Sbjct: 320 MNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGV 379

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +P+   Y  ++ G CK+G+   A +LL E I+ G+ P+  T+N L  G+ ++        
Sbjct: 380 QPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFE 439

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           LL  M+    LP+  SY  ++NGL + G+ + A ++ +EM+  G + +  M   L+ G  
Sbjct: 440 LLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG-- 497

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                ++  +  A +  EKMTK     D   Y  +I+ L    + +EA  +     + G 
Sbjct: 498 ---HSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGL 554

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +P   T++ +I   C  G ++KA  LL  M      P+  +Y  L+
Sbjct: 555 VPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLL 600



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 194/413 (46%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K     E  DI   +   G   +   +++L+  L  + +   A K   E    GL P++
Sbjct: 359 MKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDT 418

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T++ +++ +  ++D   A ++++ M ++G  PNV ++ I++N LC++G  KEA  +L++
Sbjct: 419 FTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEE 478

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G KPN   Y  L+ G    G +  A E L  +    + PD++ Y +++ G   VGR
Sbjct: 479 MISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGR 538

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA E   +  +RG+ P+  T++ L +GYCK G   K   LL+ M      P+  +Y+ 
Sbjct: 539 MEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTD 598

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LL G  K        SI + M+  G + D       + G+ +++    + +E A+ V  +
Sbjct: 599 LLEGYFKSNDYEKVSSILQSMLGSGDKPDNH-----IYGIVIRNLSRSENMEVAFMVLTE 653

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           + K   V D   Y  +I  L K    ++A+  L    + G  P  + +N +I   C  G 
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 713

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           I +A  +   +     +P+  +Y  LI    +     DA  LY   L +G+ P
Sbjct: 714 ISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAP 766



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 167/363 (46%), Gaps = 9/363 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+      ++++ A +  +E  + G+ PN +++ IMI   C   +  EA  +++ M 
Sbjct: 421 YNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMI 480

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PN   +  L+    K G +  A E L++M +    P++  YN L+KGL  VGR+E
Sbjct: 481 SEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRME 540

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA E    V+  GL PD +TY+ ++ G+CK G   +A +LL + +  G+ PN  T+  L 
Sbjct: 541 EAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLL 600

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            GY K     K   +L+ M      PD   Y  ++  L +   +  A  +  E+ + G  
Sbjct: 601 EGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLV 660

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGKGKK 385
            D  + +SL+ GLC  +  EK     A  + ++M K+    +PG   Y  +I    +   
Sbjct: 661 PDLHIYSSLISGLCKIADMEK-----AVGLLDEMAKE--GLEPGIVCYNALIDGFCRSGD 713

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
              A       +  G +P  +T+  +I   C  G I  A  L   M +    P    Y++
Sbjct: 714 ISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNV 773

Query: 446 LIT 448
           L T
Sbjct: 774 LAT 776



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 173/337 (51%), Gaps = 6/337 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L  +   E A +++++    GL P+ +T+S +I  YC   +  +A +++  M 
Sbjct: 526 YNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQML 585

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           ++G  PN  T+T L+    KS   ++   +L  M   G KP+   Y  +++ L     +E
Sbjct: 586 NSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENME 645

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A+ +L  V+ +GL PD++ Y++++ G CK+    +A+ LL+E  + G+ P +V +N L 
Sbjct: 646 VAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALI 705

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G+C+ G   +   +   +  +  +P+ ++Y+ L++G  K G I  A  ++KEM+  G  
Sbjct: 706 DGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIA 765

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D  + N L  G C  + + +  L    ++F +    VS+ +   +G   R  GK ++T 
Sbjct: 766 PDAFVYNVLATG-CSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKR--GKLQET- 821

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           E L+H+    E+  +P   T   V+      GK+ +A
Sbjct: 822 EKLLHVMMDREI--VPNAQTVEKVVSEFGKAGKLGEA 856



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 34/276 (12%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   +   + DLL      N+ E            G  P++  + I+IR      +   A
Sbjct: 588 GLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVA 647

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             V+  +  NG  P++  ++ L++ LCK   +++A+ +LD+M + G +P I  YN L+ G
Sbjct: 648 FMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDG 707

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP- 258
            C  G +  A  +  ++   GL P+  TYTA++DG CK G   +A +L  E ++RG+ P 
Sbjct: 708 FCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPD 767

Query: 259 ---------------------------------NVVTFNTLFNGYCKEGTPMKGVGLLKL 285
                                            NV  FNTL +G+CK G   +   LL +
Sbjct: 768 AFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHV 827

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           M  R  +P+  +   +++   K GK+  A  +F E+
Sbjct: 828 MMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAEL 863



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 157/386 (40%), Gaps = 65/386 (16%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P+     +LV++  K+G ++ A +V+  M  +G  P  +  N LLK L     +E  +++
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230

Query: 213 LMNVKNDGLKPDVYTYTAVMD-----------------------------------GFCK 237
              ++  G+ PDVYTY+  ++                                   G C+
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G   EA     E ++ G++P+  T+  L NG CK     +   LL  M      P+ + 
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC---------------- 341
           Y TL++G +K GK   A  I KEM+  G + ++ M ++L+RGLC                
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410

Query: 342 --------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                         M+   ++   + A+++  +M     + +  +YGI+I  L +  ++ 
Sbjct: 411 KVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESK 470

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA   L   I  G  P    +  +I     EG I  A   L  M +    P    Y+ LI
Sbjct: 471 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLI 530

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L  + +  +A   Y    K+G++P
Sbjct: 531 KGLSTVGRMEEAEEYYAQVQKRGLVP 556



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 5/222 (2%)

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           R  +P+    + L + Y K G+      ++ +M      P +   + LL  LL+   +  
Sbjct: 167 RSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMEL 226

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
              +   M   G   D    ++ +   C    + +D  + A +VFE+M ++    +  TY
Sbjct: 227 LWKLKGFMEGAGILPDVYTYSTFIEAHC----KARDF-DAAKKVFEEMRRRDCAMNEVTY 281

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
            ++I  L +    +EA       ++ G  P   T+  ++  LC   ++ +A  LL  M  
Sbjct: 282 NVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSC 341

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
               P+   Y  L+    +  K+ +A  +    +  GV P +
Sbjct: 342 SGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNK 383


>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
          Length = 581

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 211/428 (49%), Gaps = 13/428 (3%)

Query: 27  NKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKD-GTNWSV 85
           + L VF A   S    L +  +  S Q Q  V   ++    + + +FD +    G +   
Sbjct: 123 SALAVFTALHCS---PLSITPSAHSCQ-QIIVVLCRSGRQADALQLFDQMTTHYGYSPDA 178

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID- 144
              + L+ +    N  + +    S+AS +G    ++ ++ ++     +    +   + + 
Sbjct: 179 RFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFER 238

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            + D  Y P+V +F +++  +C+ G++++ALE++++M   GC P+  T+N ++ GLC   
Sbjct: 239 WIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTN 298

Query: 205 RVEEAYEMLMNVKNDGL-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            V   +E+L  ++ DG+  P+V T+T+V+ G+CK G+  +AM + N+ +  G+ PN VT+
Sbjct: 299 EVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTY 358

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N L NGY K G     V + + M +  C PD +++S+L++G  + G++  A+ I+ +M +
Sbjct: 359 NVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQ 418

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG-TYGIVIRTLGK 382
              + +    + ++  LC     +++  ++A ++  ++  +  +      Y  VI  L K
Sbjct: 419 HRIQPNVYTFSIIIHSLC-----KQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCK 473

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
             K DEA +      E G  P   T+  +I   C + +I +A++    M E    P   +
Sbjct: 474 CGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSIT 533

Query: 443 YDMLITKL 450
            +  I+ L
Sbjct: 534 VNCFISCL 541



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 190/395 (48%), Gaps = 11/395 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASS-YGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
           S      +++ L     Q  A++ F + ++ YG +P++   S ++      N    +  +
Sbjct: 141 SAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATL 200

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ--MGRIGCKPNIQTYNCLLKGL 200
           +    + G       +  L++SL   GR+ + + + ++    R+   P++ ++N ++KG+
Sbjct: 201 LSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLY-SPDVWSFNVVIKGV 259

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT-PN 259
           C VG+V++A E++  +   G  PD  T+  ++DG C+    +   E+L      GV  PN
Sbjct: 260 CRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 319

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VVTF ++ +GYCK G     + +   M     +P+ ++Y+ L+NG  K G +  AV +++
Sbjct: 320 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 379

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           +M R     D    +SL+ G C         L+DA +++  M +     +  T+ I+I +
Sbjct: 380 QMTRLRCPPDVVTFSSLIDGYC-----RCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 434

Query: 380 LGKGKKTDEALIHLHHA-IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
           L K  ++DEA+  L+   +     P+   +N VI  LC  GK+D+A L+   M E    P
Sbjct: 435 LCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 494

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            + +Y +LI       +  +A   +   ++ G  P
Sbjct: 495 DKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSP 529



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 125/285 (43%), Gaps = 43/285 (15%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA-PNS 120
           KA  L ER++ F      G +      N ++  L   NE     +        G+  PN 
Sbjct: 267 KALELVERMNEF------GCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNV 320

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+ +I  YC      +A  V + M  +G  PN  T+ +L+N   K G L  A+EV  Q
Sbjct: 321 VTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQ 380

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R+ C P++ T++ L+ G C  G++++A  +  ++    ++P+VYT++ ++   CK  R
Sbjct: 381 MTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNR 440

Query: 241 SNEAMELLNE------------------------------------AIERGVTPNVVTFN 264
           S+EA+ LLNE                                      E+G  P+  T+ 
Sbjct: 441 SDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYT 500

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
            L  GYC +    + +     M +  C PD I+ +  ++ LLK G
Sbjct: 501 ILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAG 545



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 1/216 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L++ + +++ +   G   +   +N L+     + +  +AV+ + + +     P+  
Sbjct: 332 KAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVV 391

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS +I  YC      +A ++   M  +   PNV TF+I+++SLCK  R  EA+ +L+++
Sbjct: 392 TFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNEL 451

Query: 182 G-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             R    P    YN ++  LC  G+V+EA  +   ++  G +PD YTYT ++ G+C   R
Sbjct: 452 NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSR 511

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            +EA+   +E +E G +P+ +T N   +   K G P
Sbjct: 512 ISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMP 547



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 1/191 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   ++++  + +      V  F+ L+       + + A++ +S+ + + + PN +
Sbjct: 367 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVY 426

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCM-FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           TFSI+I   C +N   EA ++++ +       P    +  +++ LCK G++ EA  +   
Sbjct: 427 TFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKG 486

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC+P+  TY  L+ G C   R+ EA      +   G  PD  T    +    K G 
Sbjct: 487 MEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 546

Query: 241 SNEAMELLNEA 251
            NE   ++  A
Sbjct: 547 PNEVDHVMRLA 557


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 181/345 (52%), Gaps = 5/345 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I   ++K+G   +V  +  L+     + + E A + F E    G+  + + ++ +I C 
Sbjct: 285 EILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 344

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +   A  + D M D G  P+  T+  L++ +CK+G+++ A  ++++M   G   N 
Sbjct: 345 CRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP 404

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             +N L+ G C  G V+EA  + + ++  GL+ DV+ Y ++  G CK+ R +EA  LL  
Sbjct: 405 VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFS 464

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +ERGV+PN ++F TL + YCKEG  ++   + + M+++  +P+ I+Y+ L++G  K G 
Sbjct: 465 MVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGN 524

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           ++ A  +  E+   G   D     SL+ G C+        ++ A ++F++M ++  V + 
Sbjct: 525 MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGK-----VDMALKLFDEMPQRGLVPNV 579

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            TY  +I  L K  +++EA        E G  P    +++++ +L
Sbjct: 580 VTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 183/383 (47%), Gaps = 5/383 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           +L  L    + E   K   E ++ G+  N  T++  I  Y  + D     +++  M   G
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              NV T+T+L++     G+++EA  + ++M   G + ++  Y  ++   C  G V+ A 
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   + + GL P  +TY A++ G CK G+   A  L+NE   +G+  N V FNTL +GY
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 414

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+ G   + + L  +M+K+    D  +Y+++ +GL K  +   A  +   MV  G   + 
Sbjct: 415 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 474

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +L+   C    +E + +E A +VF +M +K +V +  TY ++I    K     EA 
Sbjct: 475 MSFTTLIDIYC----KEGNFVE-AKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 529

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                    G IP   T  ++I   C +GK+D AL L   M +   +P+  +Y  +I+ L
Sbjct: 530 KLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGL 589

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +  +S +A  LY    + G+ P
Sbjct: 590 SKDGRSEEAFKLYDEMKETGLTP 612



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 129/279 (46%), Gaps = 35/279 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           ++  +K  + +FD +   G   S   +  L+  +    + E A    +E    G+  N  
Sbjct: 346 RSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPV 405

Query: 122 TFSIMIRCYCN-------------------KNDFF----------------EARKVIDCM 146
            F+ +I  YC                    ++D F                EA+ ++  M
Sbjct: 406 IFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM 465

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            + G  PN  +FT L++  CK G   EA  V  +M   G  PNI TYN L+ G    G +
Sbjct: 466 VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNM 525

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA+++   ++N GL PDVYT T+++ G C  G+ + A++L +E  +RG+ PNVVT+  +
Sbjct: 526 KEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAM 585

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +G  K+G   +   L   MK+    PD   YS+L+  L
Sbjct: 586 ISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 166/386 (43%), Gaps = 40/386 (10%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           F ++ R Y +   F EA +  + M   G+H +  +  + + +L + G++   L    +M 
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
            +  +  + +   +L GLC  G VE   +++  V   G+K +V TY A ++G+ K     
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGY-------------------------------- 270
              E+L    + GV  NVVT+  L +G+                                
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341

Query: 271 ---CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              C+ G   + + L   M  +  +P   +Y  L++G+ K G++  A  +  EM   G +
Sbjct: 342 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 401

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           ++  + N+L+ G C     E  ++++A ++   M KK   +D   Y  +   L K  + D
Sbjct: 402 LNPVIFNTLIDGYC-----ESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKD 456

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA   L   +E G  P T++F  +I   C EG   +A  +   M E   +P+  +Y++LI
Sbjct: 457 EAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLI 516

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +     +A  L      +G+IP
Sbjct: 517 DGYSKRGNMKEAHKLKDELENRGLIP 542


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 212/442 (47%), Gaps = 17/442 (3%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E LD + +P  +     +  + K   + + +++  S+ K+G   +   +  ++       
Sbjct: 221 EMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSG 280

Query: 100 EQETAVKFFSEASSYGLAPNSW-----TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPN 154
           + + A+ F  +  S G+ P+       T+  +++ Y  K        ++D M  NG HP+
Sbjct: 281 QPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPD 340

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLM 214
              + IL+ +  K G++ EA+ V  +M + G  P+  TY  ++  LC  GRVE+A     
Sbjct: 341 HYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFE 400

Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            + ++GL P    Y +++ G C   +   A EL+ E ++RG+  N + FN++ + +CKEG
Sbjct: 401 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 460

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
             ++   L  LM +    PD I+YSTL++G    GK+  A+ +   MV  G + +     
Sbjct: 461 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYR 520

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           +L+ G C  S      + DA  +F++M       D  TY I+++ L + ++T  A     
Sbjct: 521 TLINGYCKISR-----MGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 575

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLL---LFLMYEHAKIPSRTSYDMLITKLD 451
              E G      T+N ++  LC     D AL +   L LM    K+ +RT ++++I  L 
Sbjct: 576 RITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLM--DLKLEART-FNIMIDALL 632

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           ++ ++ +A  L+ A    G++P
Sbjct: 633 KVGRNGEAKDLFVAFSSNGLVP 654



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 188/411 (45%), Gaps = 53/411 (12%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
           +FD + + G   S+   N  L A V  +    AV  ++  +  G   + P   T++I+I 
Sbjct: 37  VFDELLRRGRGASIYGLNRAL-ADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIG 95

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
           C C  +        +  +   G+     TFT L+  LC   R  +A++ VL +M  + C 
Sbjct: 96  CCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCM 155

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYE---MLMNVKNDGLKPDVYTYTAVMDGFCKVGRS--- 241
           P++ +   LLKGLC   R +EA E   M+ + +  G  PDV +YT V++GF K G S   
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKA 215

Query: 242 --------------------------------NEAMELLNEAIERGVTPNVVTFNTLFNG 269
                                           ++AME+L   ++ GV PN  T+ ++ +G
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHG 275

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKI-----SYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           YC  G P + +G LK ++     PD +     +Y TLL G    G +    ++   MVR 
Sbjct: 276 YCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRN 335

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D  + N L   +C  ++ ++  +++A  VF KM ++    D  TYG VI  L K  
Sbjct: 336 GIHPDHYVYNIL---IC--AYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSG 390

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           + ++A+++    I+ G  P  I +N++I  LC   K ++A  L+  M +  
Sbjct: 391 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 441



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 177/395 (44%), Gaps = 41/395 (10%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D ++ DG    ++ +  LL                      G+ P+ + ++I+I  Y  +
Sbjct: 295 DGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQ 354

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
               EA  V   M   G +P+  T+  ++  LCKSGR+++A+   +QM   G  P    Y
Sbjct: 355 GKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 414

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGL-------------------------------- 221
           N L+ GLC   + E A E+++ + + G+                                
Sbjct: 415 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 474

Query: 222 ---KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
              KPD+ TY+ ++DG+C  G+ +EAM+LL+  +  G+ PN VT+ TL NGYCK      
Sbjct: 475 IGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGD 534

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            + L K M+     PD I+Y+ +L GL +  +   A  ++  +   G +++    N +L 
Sbjct: 535 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH 594

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           GLC     +  L +DA ++F+ +       +  T+ I+I  L K  +  EA         
Sbjct: 595 GLC-----KNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSS 649

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
            G +P   T+  + + + G+G +++ L  LFL  E
Sbjct: 650 NGLVPNYWTYRLMAENIIGQGLLEE-LDQLFLSME 683



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 164/349 (46%), Gaps = 30/349 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F  +++ G N     +  ++  L      E A+ +F +    GL+P + 
Sbjct: 353 KQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 412

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C  N +  A ++I  M D G   N   F  +++S CK GR+ E+ ++ D M
Sbjct: 413 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 472

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            RIG KP+I TY+ L+ G C  G+++EA ++L  + + GLKP+  TY  +++G+CK+ R 
Sbjct: 473 VRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRM 532

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ L  E    GV+P+++T+N +  G  +         L   + +     +  +Y+ +
Sbjct: 533 GDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 592

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDER----MMNSLLR-----------------GL 340
           L+GL K      A+ +F+ +     +++ R    M+++LL+                 GL
Sbjct: 593 LHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGL 652

Query: 341 CMKSWEEK---------DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
               W  +          LLE+  Q+F  M       D G    ++R L
Sbjct: 653 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 701



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 39/337 (11%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P V T+ IL+   C++ RL      L  + + G +    T+  LLKGLC   R  +A ++
Sbjct: 85  PTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 213 LMNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAMEL---LNEAIERGVTPNVVTFNTLFN 268
           ++    +    PDV++ T ++ G C   RS EA+EL   + +    G  P+VV++ T+ N
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVIN 204

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G+ KEG   K       M  R   PD ++YS+++  L K   +  A+ +   MV+ G   
Sbjct: 205 GFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMP 264

Query: 329 DERMMNSLLRGLC-----------------------------------MKSWEEKDLLED 353
           + R   S++ G C                                   ++ +  K  L  
Sbjct: 265 NCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVG 324

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
            + + + M +     D   Y I+I    K  K DEA++      + G  P  +T+  VI 
Sbjct: 325 MHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIG 384

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            LC  G+++ A+L    M +    P    Y+ LI  L
Sbjct: 385 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 421



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 113/243 (46%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + + G    +  ++ L+    +  + + A+K  S   S GL PN+ T+  +I  YC
Sbjct: 468 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYC 527

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
             +   +A  +   M  +G  P++ T+ I++  L ++ R   A E+  ++   G +  + 
Sbjct: 528 KISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 587

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN +L GLC     ++A  M  N+    LK +  T+  ++D   KVGR+ EA +L    
Sbjct: 588 TYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAF 647

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              G+ PN  T+  +      +G   +   L   M+   C  D    + ++  LL+ G+I
Sbjct: 648 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 707

Query: 312 RPA 314
             A
Sbjct: 708 TRA 710


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 187/406 (46%), Gaps = 48/406 (11%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V+ F+D++  +  L     A +      + G  P   T+  +++  C      EA
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA 299

Query: 140 RKVIDCMFDNGYHP--NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           R ++      G  P  NV  F  ++      G+L EA E+ + MG  GC+P+  TY+ L+
Sbjct: 300 RAML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILM 353

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            GLC +GR+  A  +L  ++  G  P+V TYT V+  FCK G  ++   LL E   +G+T
Sbjct: 354 HGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLT 413

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD----------------------- 294
            N   +N +    CK+G   + +GL++ M+ + C PD                       
Sbjct: 414 LNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 473

Query: 295 ------------KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
                        I+Y+T+++ LL+ G+ + AV + KEM+  G  +D    N L++ +C 
Sbjct: 474 FENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 533

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
               ++ L+     + E+M +K    +  +Y I+I  L K ++  +AL      +  G  
Sbjct: 534 DGNVDRSLV-----LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLA 588

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           P  +T+N +I  LC  G +  AL LL  ++     P   +Y++LI+
Sbjct: 589 PDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 204/463 (44%), Gaps = 70/463 (15%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG-LAPNSWTFSIMIRCYCNKND 135
           ++ G   S   +N +L  L   +    A+  +        + P ++TF +  R  C    
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA  ++  M  +G  P+   +  ++++LC  G + EA  +L++M  +GC  ++ T++ 
Sbjct: 191 ANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           +++G+C +GRV EA  ++  +   G  P V TY  ++ G C+V +++EA  +L    E  
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL- 309

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
              NVV FNT+  G   EG   +   L + M  + C PD  +YS L++GL K G+I  AV
Sbjct: 310 ---NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAV 366

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEE-KDLLE--------------------- 352
            + +EM + GF  +      +L   C    W++ + LLE                     
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 353 -------DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
                  +A  + ++M  +    D  +Y  +I  L   ++ +EA     + +E G +   
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 406 ITFNNVIQAL-----------------------------------CGEGKIDKALLLLFL 430
           IT+N +I AL                                   C +G +D++L+LL  
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M E    P+  SY++LI++L +  +  DA  L    L QG+ P
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAP 589



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 170/332 (51%), Gaps = 5/332 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++++++   G       ++ L+  L  L    +AV+   E    G APN  T++I
Sbjct: 327 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTI 386

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  +C    + + R +++ M   G   N   +  ++ +LCK GR+ EA+ ++ +M   G
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P+I +YN ++  LC   ++EEA  M  N+  +G+  +  TY  ++    + GR  +A+
Sbjct: 447 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 506

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  E I  G + +VV++N L    CK+G   + + LL+ M ++   P+ +SY+ L++ L
Sbjct: 507 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++R A+ + K+M+  G   D    N+L+ GLC   W     +  A  + EK+  + 
Sbjct: 567 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW-----MHAALNLLEKLHNEN 621

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
              D  TY I+I    K +  D+A + L+ A+
Sbjct: 622 VHPDIITYNILISWHCKVRLLDDAAMLLNRAM 653



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 107/211 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +   ++  G N  +  +N ++  L    + E A   F      G+  N  
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I        + +A ++   M  +G   +V ++  L+ ++CK G +  +L +L++M
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G KPN  +YN L+  LC   RV +A E+   + N GL PD+ TY  +++G CK+G  
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           + A+ LL +     V P+++T+N L + +CK
Sbjct: 608 HAALNLLEKLHNENVHPDIITYNILISWHCK 638



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 20/197 (10%)

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR--------FGFEVDERMMNS 335
           +L ++    P   SY+ +L+ L +      A+++++ MV         F F V  R +  
Sbjct: 128 QLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCR 187

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L R              +A  +   M +   V D   Y  VI  L       EA   L+ 
Sbjct: 188 LGRA------------NEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNE 235

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
            + MG      TF++V++ +CG G++ +A  L+  M     +P   +Y  L+  L ++ +
Sbjct: 236 MLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQ 295

Query: 456 SYDACALYGAALKQGVI 472
           + +A A+ G   +  V+
Sbjct: 296 ADEARAMLGRVPELNVV 312


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 180/357 (50%), Gaps = 8/357 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK---FFSEASSYGLAPNSWT 122
           L++  D+   IK  G   SV+ +N L+                    E    G++P + T
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVT 266

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           F ++I  YC  ++   A +V + M   G   +V T+  L++ LC  G+++E ++++++M 
Sbjct: 267 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
            +G  PN  T+ C+LKG C  G + +A + +  +    ++PDV  Y  ++D + ++G+  
Sbjct: 327 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKME 386

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +AM +     ++G++PNV T+N L  G+ + G      GLL  MK++    D ++Y+ L+
Sbjct: 387 DAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
             L   G++R AV +  EM   G E +    N++++G C     +K  ++ AY++  +M 
Sbjct: 447 GALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFC-----DKGNIKSAYEIRTRME 501

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           K     +  TY + I+   +  K DEA   L+  ++   +P  IT+  + + +  +G
Sbjct: 502 KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 203/423 (47%), Gaps = 21/423 (4%)

Query: 46  KENPRSLQAQRFVDRIKASPL-KERIDI----FDSIKKDGTNWSVSDFNDLLMALVMLNE 100
           + +PR   +   V+ + A  +  +R+D+    F S  +   +  +  FN ++  L  + +
Sbjct: 147 ESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206

Query: 101 QETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN---DFFEARKVIDCMFDNGYHPNVTT 157
              A     +  ++GLAP+  T++ +I  YC K    + +    ++  M + G  P   T
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVT 266

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F +L+N  CK+     A+ V ++M + G   ++ TYN L+ GLC  G+VEE  +++  ++
Sbjct: 267 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           + GL P+  T+  V+ GFCK G   +A + ++   ER V P+VV +N L + Y + G   
Sbjct: 327 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKME 386

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
             + + + M K+   P+  +Y+ L+ G  + G  R A  +  EM   G E D    N L+
Sbjct: 387 DAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL---GKGKKTDEALIHLH 394
             LC K    K     A ++ ++M++     +  TY  +I+     G  K   E    + 
Sbjct: 447 GALCCKGEVRK-----AVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME 501

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
              +  ++   +T+N  I+  C  GK+D+A  LL  M +   +P+  +Y+ +  K   +E
Sbjct: 502 KCRKRANV---VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI--KEGMME 556

Query: 455 KSY 457
           K Y
Sbjct: 557 KGY 559



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 8/255 (3%)

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +P   +  A++ G     R + A +    A+ R V+P++ TFNT+ +G C+ G   K   
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLK---WGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
           + K +K     P   +Y++L++G  K    G +     + KEMV  G          L+ 
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           G C  S         A +VFE+M ++       TY  +I  L    K +E +  +    +
Sbjct: 273 GYCKNSNTAA-----AVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
           +G  P  ITF  V++  C +G +  A   +  M E    P    Y++LI    +L K  D
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387

Query: 459 ACALYGAALKQGVIP 473
           A A+  A  K+G+ P
Sbjct: 388 AMAVKEAMAKKGISP 402


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 186/400 (46%), Gaps = 10/400 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K +   E   ++  + K     +++ FN  +  L    +   A     +  ++G +PN 
Sbjct: 176 VKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNI 235

Query: 121 WTFSIMIRCYCNKND---FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
            T++ +I  +C K      + A  ++  M  N   PN  TF  L++  CK   +  A   
Sbjct: 236 VTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNA 295

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
            ++M R G KPNI TYN L+ GL   G+++EA  +   +   GLKP++ T+ A+++GFCK
Sbjct: 296 FEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCK 355

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
                EA +L ++  E+ + PN +TFNT+ + +CK G   +G  L   M      P+  +
Sbjct: 356 KKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVST 415

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+ L+ GL +   +R A  +  EM  +  + D    N L+ G C      K     A ++
Sbjct: 416 YNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSK-----AEKL 470

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
             +M       +  TY  ++           AL       + G     +T+N +I+  C 
Sbjct: 471 LGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCK 530

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
            GK++ A  LL  M E    P+RT+YD  + +L+ LEK +
Sbjct: 531 TGKLEDANRLLNEMLEKGLNPNRTTYD--VVRLEMLEKGF 568



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 217/485 (44%), Gaps = 50/485 (10%)

Query: 38  STAESLDLKENPRSLQAQR-FVDRIKASPLKERIDIFDSIKKDG----TNWSVSDFNDLL 92
           +T + L L  N +     R F+D++  +       +F S+   G     N  ++D   L+
Sbjct: 80  TTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDM--LV 137

Query: 93  MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
           +A V   E  +A + F     YG   +  + + ++      N+  E + V   M      
Sbjct: 138 LAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQ 197

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY-- 210
           PN+TTF I +N LCK+G+L +A +V++ +   G  PNI TYN L+ G C  G   + Y  
Sbjct: 198 PNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRA 257

Query: 211 -----EMLMN-------------------------------VKNDGLKPDVYTYTAVMDG 234
                EML N                               ++  GLKP++ TY ++++G
Sbjct: 258 DAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLING 317

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
               G+ +EA+ L ++ +  G+ PN+VTFN L NG+CK+    +   L   + +++ +P+
Sbjct: 318 LSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPN 377

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            I+++T+++   K G +    ++   M+  G   +    N L+ GLC         +  A
Sbjct: 378 AITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLC-----RNQNVRAA 432

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++  +M       D  TY I+I    K  +  +A   L   + +G  P  +T+N ++  
Sbjct: 433 KKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDG 492

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            C EG +  AL +   M +  K  +  +Y++LI    +  K  DA  L    L++G+ P 
Sbjct: 493 YCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPN 552

Query: 475 RKPQD 479
           R   D
Sbjct: 553 RTTYD 557


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 181/345 (52%), Gaps = 5/345 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I   ++K+G   +V  +  L+     + + E A + F E    G+  + + ++ +I C 
Sbjct: 281 EILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 340

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +   A  + D M D G  P+  T+  L++ +CK+G+++ A  ++++M   G   N 
Sbjct: 341 CRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP 400

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             +N L+ G C  G V+EA  + + ++  GL+ DV+ Y ++  G CK+ R +EA  LL  
Sbjct: 401 VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFS 460

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +ERGV+PN ++F TL + YCKEG  ++   + + M+++  +P+ I+Y+ L++G  K G 
Sbjct: 461 MVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGN 520

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           ++ A  +  E+   G   D     SL+ G C+        ++ A ++F++M ++  V + 
Sbjct: 521 MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGK-----VDMALKLFDEMPQRGLVPNV 575

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            TY  +I  L K  +++EA        E G  P    +++++ +L
Sbjct: 576 VTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 185/390 (47%), Gaps = 5/390 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V     +L  L    + E   K   E ++ G+  N  T++  I  Y  + D     +++
Sbjct: 224 TVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEIL 283

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G   NV T+T+L++     G+++EA  + ++M   G + ++  Y  ++   C  
Sbjct: 284 TLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRS 343

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G V+ A  +   + + GL P  +TY A++ G CK G+   A  L+NE   +G+  N V F
Sbjct: 344 GNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIF 403

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           NTL +GYC+ G   + + L  +M+K+    D  +Y+++ +GL K  +   A  +   MV 
Sbjct: 404 NTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVE 463

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   +     +L+   C    +E + +E A +VF +M +K +V +  TY ++I    K 
Sbjct: 464 RGVSPNTMSFTTLIDIYC----KEGNFVE-AKRVFREMEEKGNVPNIITYNVLIDGYSKR 518

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
               EA          G IP   T  ++I   C +GK+D AL L   M +   +P+  +Y
Sbjct: 519 GNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTY 578

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +I+ L +  +S +A  LY    + G+ P
Sbjct: 579 TAMISGLSKDGRSEEAFKLYDEMKETGLTP 608



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 129/279 (46%), Gaps = 35/279 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           ++  +K  + +FD +   G   S   +  L+  +    + E A    +E    G+  N  
Sbjct: 342 RSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPV 401

Query: 122 TFSIMIRCYCN-------------------KNDFF----------------EARKVIDCM 146
            F+ +I  YC                    ++D F                EA+ ++  M
Sbjct: 402 IFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM 461

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            + G  PN  +FT L++  CK G   EA  V  +M   G  PNI TYN L+ G    G +
Sbjct: 462 VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNM 521

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA+++   ++N GL PDVYT T+++ G C  G+ + A++L +E  +RG+ PNVVT+  +
Sbjct: 522 KEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAM 581

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +G  K+G   +   L   MK+    PD   YS+L+  L
Sbjct: 582 ISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 166/386 (43%), Gaps = 40/386 (10%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           F ++ R Y +   F EA +  + M   G+H +  +  + + +L + G++   L    +M 
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
            +  +  + +   +L GLC  G VE   +++  V   G+K +V TY A ++G+ K     
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGY-------------------------------- 270
              E+L    + GV  NVVT+  L +G+                                
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 337

Query: 271 ---CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              C+ G   + + L   M  +  +P   +Y  L++G+ K G++  A  +  EM   G +
Sbjct: 338 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 397

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
           ++  + N+L+ G C     E  ++++A ++   M KK   +D   Y  +   L K  + D
Sbjct: 398 LNPVIFNTLIDGYC-----ESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKD 452

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA   L   +E G  P T++F  +I   C EG   +A  +   M E   +P+  +Y++LI
Sbjct: 453 EAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLI 512

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               +     +A  L      +G+IP
Sbjct: 513 DGYSKRGNMKEAHKLKDELENRGLIP 538


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 207/470 (44%), Gaps = 65/470 (13%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L++ + +   +++ G   ++   N  +   V  N  E A++F       G+ PN  
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ MIR YC+ +   EA ++++ M   G  P+  ++  ++  LCK  R+ E  +++ +M
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373

Query: 182 GR-IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK------------------ 222
            +  G  P+  TYN L+  L      +EA   L + +  G +                  
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433

Query: 223 --------------PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
                         PDV TYTAV++GFC++G  ++A +LL      G  PN V++  L N
Sbjct: 434 MSEAKDLINEMDCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLN 493

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G C+ G  ++   ++ + ++    P+ I+YS +++GL + GK+  A  + +EMV  GF  
Sbjct: 494 GMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP 553

Query: 329 DERMMNSLLRGLC------------------------------MKSWEEKDLLEDAYQVF 358
               +N LL+ LC                              +  + + D L+ A  V 
Sbjct: 554 GPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVL 613

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           + M       D  TY  ++ TLGK  +  EA   +   +  G  P  +T+  VI   C  
Sbjct: 614 DDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQM 673

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           GK+D  + +L  M    K   RT Y+ +I KL  L K  +A  L G  L+
Sbjct: 674 GKVDDLVAILEKMISRQK--CRTIYNQVIEKLCVLGKLEEADTLLGKVLR 721



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 182/425 (42%), Gaps = 69/425 (16%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+      FS ++  Y       +A KV+  M   G  PN+      ++   ++ RL++A
Sbjct: 237 GIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKA 296

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L  L++M  +G  PN+ TYNC+++G C + RVEEA E+L ++ + G  PD  +Y  +M  
Sbjct: 297 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGY 356

Query: 235 FCKVGRSNEAMELLNE-AIERGVTPNVVTFNTLFN------------------------- 268
            CK  R  E  +L+ + A E G+ P+ VT+NTL +                         
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416

Query: 269 ---GY-------CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
              GY       CKEG   +   L+  M   +C PD ++Y+ ++NG  + G++  A  + 
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEM---DCPPDVVTYTAVVNGFCRLGEVDKAKKLL 473

Query: 319 KEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDL-------------------------- 350
           + M   G + +     +LL G+C   KS E +++                          
Sbjct: 474 QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRRE 533

Query: 351 --LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             L +A  V  +M  K     P    +++++L +  +T EA   +   +  G     + F
Sbjct: 534 GKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNF 593

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
             VI   C   ++D AL +L  MY   K     +Y  L+  L +  +  +A  L    L 
Sbjct: 594 TTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLH 653

Query: 469 QGVIP 473
           +G+ P
Sbjct: 654 KGIDP 658



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 185/381 (48%), Gaps = 18/381 (4%)

Query: 99  NEQETAVKFFSEAS-SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           +++  A+KFF  A   +    +   +  M+           +R+V+  M   G +     
Sbjct: 185 DDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEA 244

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F+ ++ S  ++G+L++AL+VL  M R G +PN+   N  +       R+E+A   L  ++
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G+ P+V TY  ++ G+C + R  EA+ELL +   +G  P+ V++ T+    CKE   +
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364

Query: 278 KGVGLLKLMKKRNCL-PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
           +   L+K M K + L PD+++Y+TL++ L K      A+   K+    GF +D+   +++
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424

Query: 337 LRGLCMKSW--EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA--LIH 392
           +  LC +    E KDL+ +               D  TY  V+    +  + D+A  L+ 
Sbjct: 425 VHALCKEGRMSEAKDLINEMD----------CPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 474

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           + H    GH P T+++  ++  +C  GK  +A  ++ +  EH   P+  +Y +++  L +
Sbjct: 475 VMHT--HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRR 532

Query: 453 LEKSYDACALYGAALKQGVIP 473
             K  +AC +    + +G  P
Sbjct: 533 EGKLSEACDVVREMVLKGFFP 553



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 166/358 (46%), Gaps = 9/358 (2%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +  ++     L E + A K      ++G  PN+ +++ ++   C      EAR++++
Sbjct: 450 VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMN 509

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
              ++ + PN  T++++++ L + G+L EA +V+ +M   G  P     N LL+ LC  G
Sbjct: 510 MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDG 569

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R  EA + +    N G   +V  +T V+ GFC+    + A+ +L++        +V T+ 
Sbjct: 570 RTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYT 629

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL +   K+G   +   L+K M  +   P  ++Y T+++   + GK+   V+I ++M+  
Sbjct: 630 TLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI-- 687

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT-YGIVIRTLGKG 383
             +    + N ++  LC+        LE+A  +  K+ +  S +D  T Y ++   L KG
Sbjct: 688 SRQKCRTIYNQVIEKLCVLGK-----LEEADTLLGKVLRTASRSDAKTCYALMEGYLKKG 742

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
                  +          IP       + + L  +GK+D+A  L+  + E   I  ++
Sbjct: 743 VPLSAYKVAC-RMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQS 799



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 156/329 (47%), Gaps = 10/329 (3%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   +   +  LL  +    +   A +  + +  +  +PNS T+S+++     +    EA
Sbjct: 480 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEA 539

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             V+  M   G+ P      +L+ SLC+ GR  EA + +++    GC  N+  +  ++ G
Sbjct: 540 CDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHG 599

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C    ++ A  +L ++       DV+TYT ++D   K GR  EA EL+ + + +G+ P 
Sbjct: 600 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPT 659

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
            VT+ T+ + YC+ G     V +L K++ ++ C   +  Y+ ++  L   GK+  A ++ 
Sbjct: 660 PVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC---RTIYNQVIEKLCVLGKLEEADTLL 716

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
            +++R     D +   +L+ G     + +K +   AY+V  +M  +  + D      + +
Sbjct: 717 GKVLRTASRSDAKTCYALMEG-----YLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSK 771

Query: 379 TLGKGKKTDEALIHLHHAIEMGHI-PRTI 406
            L    K DEA   +   +E GHI P+++
Sbjct: 772 RLVLKGKVDEADKLMLRLVERGHISPQSL 800



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 2/264 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   L E  D+   +   G      + N LL +L        A KF  E  + G A N  
Sbjct: 532 REGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVV 591

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  +C  ++   A  V+D M+    H +V T+T LV++L K GR+ EA E++ +M
Sbjct: 592 NFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKM 651

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P   TY  ++   C +G+V++   +L  + +      +  Y  V++  C +G+ 
Sbjct: 652 LHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKL 709

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  LL + +      +  T   L  GY K+G P+    +   M  RN +PD      L
Sbjct: 710 EEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKL 769

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFG 325
              L+  GK+  A  +   +V  G
Sbjct: 770 SKRLVLKGKVDEADKLMLRLVERG 793


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 200/410 (48%), Gaps = 8/410 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            KE  ++++ +  +     V  +  L+  L    + + A + +SE    GL  ++  ++ 
Sbjct: 280 FKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNS 339

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR-I 184
           +++ +C      EA K  D     G   N+ T+ I++  L  SG + EA+E+ D + + +
Sbjct: 340 LVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDV 398

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
            C P+  T+  L+ GLC  G   +A+ +    +  G + DV++Y+++++G C VGR  +A
Sbjct: 399 ACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDA 458

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           +++  +  + G  PN   +N L +G+C+       V +   M    C P  I+Y+TL++G
Sbjct: 459 VKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDG 518

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K  K + A S+ +EMV  GF  D     SL+RGL    + +K + +DA  +++++  K
Sbjct: 519 LCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGL----FSDKKI-DDALSIWKQILYK 573

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP-RTITFNNVIQALCGEGKIDK 423
               D   + I+I  L    K DEAL       E  + P   +T+N ++  L   G IDK
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A  L   + E    P   SY+  I  L   ++ ++   L    L +G+IP
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIP 683



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 193/378 (51%), Gaps = 8/378 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  I K G     + +N L+         + A KF+  A   GL  N  T++IMI+   
Sbjct: 321 VYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLF 379

Query: 132 NKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           +     EA ++ D +  D    P+  TF  L++ LC++G   +A  + ++    G + ++
Sbjct: 380 DSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDV 439

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y+ ++ GLC VGR+ +A ++   +  DG KP+ + Y A++ GFC+V R+++A+ + ++
Sbjct: 440 FSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSK 499

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             + G +P V+T+NTL +G CK     +   + + M +    PD  +Y +L+ GL    K
Sbjct: 500 MADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKK 559

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM-TKKVSVTD 369
           I  A+SI+K+++  G +VD  M N L+ GLC         +++A  VF  M  KK    +
Sbjct: 560 IDDALSIWKQILYKGLKVDVMMHNILIHGLC-----SAGKVDEALHVFSDMKEKKNCPPN 614

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  ++  L +    D+A        E G  P  I++N  I+ LC   +I + + LL 
Sbjct: 615 LVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLD 674

Query: 430 LMYEHAKIPSRTSYDMLI 447
            +     IP+  ++++L+
Sbjct: 675 EVLSRGIIPTVITWNILV 692



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 203/424 (47%), Gaps = 16/424 (3%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           RSL A+  +DR         + +FDS+++         ++ L+  L   +  + A+    
Sbjct: 166 RSLCARGDLDRA--------VTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLD 217

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKS 168
           E     + P+   ++ ++       +F +  +V D +  D G  PN+ T+ ++++ LCK 
Sbjct: 218 EMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKF 277

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           GR KE  EV ++M     +P++ TY  L+ GLC  G V+ A  +   +   GL  D   Y
Sbjct: 278 GRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMY 337

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
            +++ GFC+ GR  EA +  + A   G+  N+ T+N +  G    G   + + L  L++K
Sbjct: 338 NSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396

Query: 289 R-NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
              C+PD +++ TL++GL + G    A +IF+E    G ++D    +S++ GLC      
Sbjct: 397 DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC-----N 451

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
              L DA +V+EKM K     +   Y  +I    +  +T +A+       + G  P  IT
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I  LC   K  +A  +   M E+   P  T+Y  LI  L   +K  DA +++   L
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571

Query: 468 KQGV 471
            +G+
Sbjct: 572 YKGL 575



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 171/371 (46%), Gaps = 59/371 (15%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQM--GRIGCK--PNIQTYNCLLKGLCYVGR 205
           G +P + +   L+++  ++ R  +A      +  G  G +  PN+QTYN +L+ LC  G 
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE--------------- 250
           ++ A  +  +++   + PD  TY+ +M G  K  R + A++LL+E               
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233

Query: 251 ---------------------AIERGVTPNVVTFNTLFNGYCKEGTPMKGVG-LLKLMKK 288
                                  + G  PN+ T+N + +G CK G   K VG + + M  
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGR-FKEVGEVWERMVA 292

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
            N  PD I+Y  L++GL + G +  A  ++ E+++ G  +D  M NSL++G C     + 
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFC-----QA 347

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE--MGHIPRTI 406
             +++A++ ++       + +  TY I+I+ L      DEA I L   +E  +  IP T+
Sbjct: 348 GRVQEAWKFWDS-AGFAGLRNLRTYNIMIKGLFDSGMVDEA-IELWDLLEKDVACIPDTV 405

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT----SYDMLITKLDQLEKSYDACAL 462
           TF  +I  LC  G  +KA    F ++E A++  +     SY  +I  L  + +  DA  +
Sbjct: 406 TFGTLIHGLCQNGFANKA----FTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461

Query: 463 YGAALKQGVIP 473
           Y    K G  P
Sbjct: 462 YEKMDKDGCKP 472



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 129/248 (52%), Gaps = 1/248 (0%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + + +++ + KDG   +   +N L+     +     AV+ +S+ +  G +P   T++ 
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C    + EA  V   M +NG+ P++TT+  L+  L    ++ +AL +  Q+   G
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGRSNEA 244
            K ++  +N L+ GLC  G+V+EA  +  ++K      P++ TY  +MDG  + G  ++A
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L     E G+ P+++++NT   G C      +G+ LL  +  R  +P  I+++ L+  
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694

Query: 305 LLKWGKIR 312
           ++K+G I+
Sbjct: 695 VIKYGPIQ 702



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 1/270 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF+  +  G    V  ++ ++  L  +     AVK + +    G  PNS  ++ +I  +C
Sbjct: 426 IFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFC 485

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A ++   M DNG  P V T+  L++ LCK+ + +EA  V  +M   G  P+I 
Sbjct: 486 QVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDIT 545

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L++GL    ++++A  +   +   GLK DV  +  ++ G C  G+ +EA+ + ++ 
Sbjct: 546 TYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDM 605

Query: 252 IER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            E+    PN+VT+NTL +G  + G   K   L   + +    PD ISY+T + GL    +
Sbjct: 606 KEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDR 665

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           I   + +  E++  G        N L+R +
Sbjct: 666 IHEGIQLLDEVLSRGIIPTVITWNILVRAV 695


>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
 gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 204/435 (46%), Gaps = 24/435 (5%)

Query: 7   SNSFIFTNTNRRNHNKIP-QFNKLVVFAAASLSTAESL--DLKENPRSLQAQRFVDRIKA 63
           S S  ++N  R +H       +KLV  +A     AE +   +KE    +  + F+   + 
Sbjct: 37  SASAEYSNGFRHDHTTFGVMISKLV--SANEFRPAEEMLNRMKEEKCRITEEIFLSICRG 94

Query: 64  -----SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
                 PL + I +F  +   G   +   +  +   LV  N+ + A+ F+      G+  
Sbjct: 95  YGRVHMPL-DAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQ 153

Query: 119 NSWTFSIMIRCYC-NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           +  + +++I+  C N      A ++   M   G  P+  T+  L+N LCK G+  EA E+
Sbjct: 154 SVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKEL 213

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
             +M   GC P++ TY+CL+ GLC  G V+EA  +   +K   ++P+V+TY+++MDG CK
Sbjct: 214 FKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCK 273

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G S EAMELL   + +   PN+VT++TL NG CKEG   + V  L  MK +   PD   
Sbjct: 274 NGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGL 333

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMV-------RFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           Y  ++NG     K + A +   EMV       R  + +  ++ N +++GLC         
Sbjct: 334 YGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGN----- 388

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           L  ++Q++  M  +    D GT+  +++   K     +A       +  G +P    ++ 
Sbjct: 389 LNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSA 448

Query: 411 VIQALCGEGKIDKAL 425
           V+       K+ +A 
Sbjct: 449 VVGGFWDRRKVREAF 463



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 193/414 (46%), Gaps = 18/414 (4%)

Query: 72  IFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIR 128
           IFDS   + +N    D   F  ++  LV  NE   A +  +             F  + R
Sbjct: 34  IFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICR 93

Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
            Y   +   +A +V   M D G  P   ++  +   L +  +LK A+     M  +G + 
Sbjct: 94  GYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQ 153

Query: 189 NIQTYNCLLKGLCY-VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           ++ + N L+K LC   G ++ A+E+   +   G  PD YTY  +++G CK+G++ EA EL
Sbjct: 154 SVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKEL 213

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E   +G +P+VVT++ L +G C+ G   + +GL   MKK+   P+  +YS+L++GL K
Sbjct: 214 FKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCK 273

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G    A+ + + MVR   + +    ++L+ GLC     ++  L +A +  ++M  +   
Sbjct: 274 NGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLC-----KEGKLAEAVETLDRMKLQGLK 328

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITF-------NNVIQALCGEG 419
            D G YG +I      +K  EA  +L   + +G I P  +T+       N V+Q LC  G
Sbjct: 329 PDAGLYGKIINGFCNIRKFQEAATYLDEMV-LGQISPNRVTWSLHVKLNNMVVQGLCTNG 387

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++++  L   M          ++D L+    +    + A  ++   +  G +P
Sbjct: 388 NLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVP 441



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 12/179 (6%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L    +   AV+        GL P++  +  +I  +CN   F EA   +D M 
Sbjct: 299 YSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMV 358

Query: 148 DNGYHPNVTTFTI-------LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
                PN  T+++       +V  LC +G L  + ++   M   G   +  T++ L+K  
Sbjct: 359 LGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCF 418

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA-----MELLNEAIER 254
           C  G + +A  +   +  DG  PD   ++AV+ GF    +  EA     +EL+NE +E 
Sbjct: 419 CKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFESIVVELMNEFVEH 477


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 191/426 (44%), Gaps = 6/426 (1%)

Query: 49  PRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D  IK   L+    + D +   G   +   +N LL  L            
Sbjct: 229 PNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSAL 288

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E +S  + P+ +T+SI+        D      +      NG      T +IL+N LCK
Sbjct: 289 LDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCK 348

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G++  A EVL  +   G  P    YN L+ G C  G +E A+     +K+  +KPD  T
Sbjct: 349 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 408

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y A+++G CK  R   A +LL E  + GV P V TFNTL + Y + G   K   +L  M+
Sbjct: 409 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 468

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +    P+ +SY +++N   K GKI  AV+I  +M       + ++ N+++      ++ E
Sbjct: 469 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII-----DAYVE 523

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
               + A+ + EKM          TY ++I+ L    +  EA   ++       IP  ++
Sbjct: 524 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 583

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I A C  G IDKAL L   M+++    +  +Y  LI+ L    +  +   LY   +
Sbjct: 584 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMM 643

Query: 468 KQGVIP 473
           +  V+P
Sbjct: 644 QNNVVP 649



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 176/391 (45%), Gaps = 6/391 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           + A  L E + +   + +DG    +   +N ++  +        AV+ F E +   + PN
Sbjct: 171 VAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPN 230

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             T++ MI  +    D      + D M  +G  PN  T+ +L++ LC++GR+ E   +LD
Sbjct: 231 HITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLD 290

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M      P+  TY+ L  GL   G  +    +      +G+    YT + +++G CK G
Sbjct: 291 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDG 350

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           + + A E+L   +  G+ P  V +NTL NGYC+ G           MK R+  PD I+Y+
Sbjct: 351 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 410

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L+NGL K  +I  A  +  EM   G        N+L+      ++     LE  + V  
Sbjct: 411 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI-----DAYGRTGQLEKCFIVLS 465

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M +     +  +YG ++    K  K  EA+  L        +P    +N +I A    G
Sbjct: 466 EMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHG 525

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             D+A +L+  M  +   PS  +Y++LI  L
Sbjct: 526 PNDQAFILVEKMKSNGISPSIVTYNLLIKGL 556



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 177/370 (47%), Gaps = 12/370 (3%)

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
           DG  +S+     L   L    + +  +  F ++   G+    +T SI++   C       
Sbjct: 300 DGFTYSI-----LFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSI 354

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A +V+  + + G  P    +  L+N  C++G L+ A     QM     KP+  TYN L+ 
Sbjct: 355 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 414

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC   R+  A ++LM ++++G+ P V T+  ++D + + G+  +   +L+E  E G+ P
Sbjct: 415 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 474

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           NVV++ ++ N +CK G   + V +L  M  ++ LP+   Y+ +++  ++ G    A  + 
Sbjct: 475 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 534

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           ++M   G        N L++GLC +S      + +A ++   ++    + D  +Y  +I 
Sbjct: 535 EKMKSNGISPSIVTYNLLIKGLCNQSQ-----ISEAEEIINSLSNHRLIPDAVSYNTLIS 589

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
                   D+AL  L   +    I  T+ T++ +I  L G G++ +   L   M ++  +
Sbjct: 590 ACCYRGNIDKAL-DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVV 648

Query: 438 PSRTSYDMLI 447
           PS   +++++
Sbjct: 649 PSNAIHNIMV 658



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 126/262 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +    D+   ++ +G N +V  FN L+ A     + E      SE    GL PN  
Sbjct: 418 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 477

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++  ++  +C      EA  ++D MF     PN   +  ++++  + G   +A  ++++M
Sbjct: 478 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 537

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+I TYN L+KGLC   ++ EA E++ ++ N  L PD  +Y  ++   C  G  
Sbjct: 538 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 597

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A++L     + G+   V T++ L +G    G  ++   L + M + N +P    ++ +
Sbjct: 598 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIM 657

Query: 302 LNGLLKWGKIRPAVSIFKEMVR 323
           +    K+G    A  + KEM++
Sbjct: 658 VEAYSKYGNEIKAEDLRKEMLQ 679



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 129/322 (40%), Gaps = 41/322 (12%)

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD----------------------- 224
           P++ + N LL+ L  +GR  +       + + G +PD                       
Sbjct: 123 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 182

Query: 225 -------------VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
                         ++Y  V+ G  + GR  +A+E+ +E  ER V PN +T+NT+ +G+ 
Sbjct: 183 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 242

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           K G    G  L   M      P+ I+Y+ LL+GL + G++    ++  EM       D  
Sbjct: 243 KGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 302

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             + L  GL  ++ + K +L     +F K  K        T  I++  L K  K   A  
Sbjct: 303 TYSILFDGLS-RNGDSKAML----SLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEE 357

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            L   +  G +P  + +N +I   C  G+++ A      M      P   +Y+ LI  L 
Sbjct: 358 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 417

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           + E+  +A  L       GV P
Sbjct: 418 KAERITNAQDLLMEMQDNGVNP 439


>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Glycine max]
          Length = 495

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 205/412 (49%), Gaps = 18/412 (4%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE----ASSYGLAPNSWTFSIMI 127
           + +++ K    W+    N ++  L   N    A++FF        SY  +P+S+  ++ I
Sbjct: 56  VSEALTKPTIQWTPDLVNKVMKRL--WNHGPKALQFFKHLDRHHPSYTHSPSSFDHAVDI 113

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                  DF  A  ++  M      P+  T  IL      +G+   A+     M   G +
Sbjct: 114 --AARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIR 171

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            ++ ++N LL  LC   RVE A+ +L  + +   +PD  TY  + +G+C + R+  A+ +
Sbjct: 172 QDLHSFNTLLDILCKSKRVETAHSLLKTLTSR-FRPDTVTYNILANGYCLIKRTPMALRV 230

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L E ++RG+ P +VT+NT+  GY +     +       MKKR C  D ++Y+T+++G   
Sbjct: 231 LKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGV 290

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK-VS 366
            G ++ A  +F EMV+ G   +    N+L++ LC     +KD +E+A  VFE+M ++ V 
Sbjct: 291 AGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLC-----KKDSVENAVVVFEEMAREGVC 345

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           V +  TY +VIR L      + AL  +    E G      T+N VI+  C  G+++KAL 
Sbjct: 346 VPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALE 405

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD---ACALYGAALKQGVIPQR 475
           +   M + + +P+  +Y++LI+ +   +KS D   A  L    + +G +P++
Sbjct: 406 VFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRK 457



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 191/417 (45%), Gaps = 29/417 (6%)

Query: 47  ENPRSLQAQRFVDRIKAS------PLKERIDIFDSIKKDGTNWS-VSDFNDLLMA----- 94
             P++LQ  + +DR   S           +DI   ++   + W+ V     L +      
Sbjct: 82  HGPKALQFFKHLDRHHPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKT 141

Query: 95  LVMLNEQ-------ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           L +L E+         AV+ F   + +G+  +  +F+ ++   C       A  ++  + 
Sbjct: 142 LAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTL- 200

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            + + P+  T+ IL N  C   R   AL VL +M + G +P + TYN +LKG     +++
Sbjct: 201 TSRFRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIK 260

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA+E  + +K    + DV TYT V+ GF   G   +A  + +E ++ GV PNV T+N L 
Sbjct: 261 EAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALI 320

Query: 268 NGYCKEGTPMKGVGLLKLMKKRN-CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
              CK+ +    V + + M +   C+P+ ++Y+ ++ GL   G +  A+   + M   G 
Sbjct: 321 QVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGL 380

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
               +  N ++R  C     +   +E A +VF KM     + +  TY ++I  +   KK+
Sbjct: 381 RACVQTYNVVIRYFC-----DAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKS 435

Query: 387 DEALIH---LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
           ++ ++    L   ++ G +PR  TFN V+  L   G  D A  +L +     +I  R
Sbjct: 436 EDLVVAGKLLMDMVDRGFLPRKFTFNRVLNGLVITGNQDFAKEILRMQSRCGRIVRR 492


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 200/410 (48%), Gaps = 8/410 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            KE  ++++ +  +     V  +  L+  L    + + A + +SE    GL  ++  ++ 
Sbjct: 280 FKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNS 339

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR-I 184
           +++ +C      EA K  D     G   N+ T+ I++  L  SG + EA+E+ D + + +
Sbjct: 340 LVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDV 398

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
            C P+  T+  L+ GLC  G   +A+ +    +  G + DV++Y+++++G C VGR  +A
Sbjct: 399 ACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDA 458

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           +++  +  + G  PN   +N L +G+C+       V +   M    C P  I+Y+TL++G
Sbjct: 459 VKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDG 518

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L K  K + A S+ +EMV  GF  D     SL+RGL    + +K + +DA  +++++  K
Sbjct: 519 LCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGL----FSDKKI-DDALSIWKQILYK 573

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP-RTITFNNVIQALCGEGKIDK 423
               D   + I+I  L    K DEAL       E  + P   +T+N ++  L   G IDK
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A  L   + E    P   SY+  I  L   ++ ++   L    L +G+IP
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIP 683



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 204/424 (48%), Gaps = 16/424 (3%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           RSL A+  +DR         + +FDS+++         ++ L+  L   +  + A+    
Sbjct: 166 RSLCARGDLDRA--------VTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLD 217

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKS 168
           E    G+ P+   ++ ++       +F +  +V D +  D G  PN+ T+ ++++ LCK 
Sbjct: 218 EMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKF 277

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           GR KE  EV ++M     +P++ TY  L+ GLC  G V+ A  +   +   GL  D   Y
Sbjct: 278 GRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMY 337

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
            +++ GFC+ GR  EA +  + A   G+  N+ T+N +  G    G   + + L  L++K
Sbjct: 338 NSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396

Query: 289 R-NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
              C+PD +++ TL++GL + G    A +IF+E    G ++D    +S++ GLC      
Sbjct: 397 DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC-----N 451

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
              L DA +V+EKM K     +   Y  +I    +  +T +A+       + G  P  IT
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I  LC   K  +A  +   M E+   P  T+Y  LI  L   +K  DA +++   L
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571

Query: 468 KQGV 471
            +G+
Sbjct: 572 YKGL 575



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 193/378 (51%), Gaps = 8/378 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  I K G     + +N L+         + A KF+  A   GL  N  T++IMI+   
Sbjct: 321 VYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLF 379

Query: 132 NKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           +     EA ++ D +  D    P+  TF  L++ LC++G   +A  + ++    G + ++
Sbjct: 380 DSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDV 439

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            +Y+ ++ GLC VGR+ +A ++   +  DG KP+ + Y A++ GFC+V R+++A+ + ++
Sbjct: 440 FSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSK 499

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             + G +P V+T+NTL +G CK     +   + + M +    PD  +Y +L+ GL    K
Sbjct: 500 MADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKK 559

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM-TKKVSVTD 369
           I  A+SI+K+++  G +VD  M N L+ GLC         +++A  VF  M  KK    +
Sbjct: 560 IDDALSIWKQILYKGLKVDVMMHNILIHGLC-----SAGKVDEALHVFSDMKEKKNCPPN 614

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  ++  L +    D+A        E G  P  I++N  I+ LC   +I + + LL 
Sbjct: 615 LVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLD 674

Query: 430 LMYEHAKIPSRTSYDMLI 447
            +     IP+  ++++L+
Sbjct: 675 EVLSRGIIPTVITWNILV 692



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 192/400 (48%), Gaps = 12/400 (3%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS--SYG--LAPNSWTFSIMIRCYCNKND 135
           G N  +   N LL A V       A  FF+  S  ++G  +APN  T++I++R  C + D
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
              A  + D +      P+  T++ L+  L K  RL  AL++LD+M R G +P++  YN 
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233

Query: 196 LLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
           LL G    G  E+   +    VK+ G +P++ TY  ++DG CK GR  E  E+    +  
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
            + P+V+T+  L +G C+ G       +   + K   + D   Y++L+ G  + G+++ A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS-VTDPGTY 373
              F +   F    + R  N +++GL      +  ++++A ++++ + K V+ + D  T+
Sbjct: 354 WK-FWDSAGFAGLRNLRTYNIMIKGLF-----DSGMVDEAIELWDLLEKDVACIPDTVTF 407

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
           G +I  L +    ++A      A   G      +++++I  LC  G++  A+ +   M +
Sbjct: 408 GTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDK 467

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               P+   Y+ LI+   Q+ ++ DA  +Y      G  P
Sbjct: 468 DGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSP 507



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 129/248 (52%), Gaps = 1/248 (0%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + + +++ + KDG   +   +N L+     +     AV+ +S+ +  G +P   T++ 
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C    + EA  V   M +NG+ P++TT+  L+  L    ++ +AL +  Q+   G
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGRSNEA 244
            K ++  +N L+ GLC  G+V+EA  +  ++K      P++ TY  +MDG  + G  ++A
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L     E G+ P+++++NT   G C      +G+ LL  +  R  +P  I+++ L+  
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694

Query: 305 LLKWGKIR 312
           ++K+G I+
Sbjct: 695 VIKYGPIQ 702



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 1/270 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IF+  +  G    V  ++ ++  L  +     AVK + +    G  PNS  ++ +I  +C
Sbjct: 426 IFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFC 485

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A ++   M DNG  P V T+  L++ LCK+ + +EA  V  +M   G  P+I 
Sbjct: 486 QVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDIT 545

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L++GL    ++++A  +   +   GLK DV  +  ++ G C  G+ +EA+ + ++ 
Sbjct: 546 TYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDM 605

Query: 252 IER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            E+    PN+VT+NTL +G  + G   K   L   + +    PD ISY+T + GL    +
Sbjct: 606 KEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDR 665

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           I   + +  E++  G        N L+R +
Sbjct: 666 IHEGIQLLDEVLSRGIIPTVITWNILVRAV 695



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 156/372 (41%), Gaps = 94/372 (25%)

Query: 184 IGCKPNI---------------------------------------QTYNCLLKGLCYVG 204
           +GC P I                                       QTYN +L+ LC  G
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV--- 261
            ++ A  +  +++   + PD  TY+ +M G  K  R + A++LL+E    GV P+VV   
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYN 232

Query: 262 ---------------------------------TFNTLFNGYCKEGTPMKGVG-LLKLMK 287
                                            T+N + +G CK G   K VG + + M 
Sbjct: 233 ALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGR-FKEVGEVWERMV 291

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
             N  PD I+Y  L++GL + G +  A  ++ E+++ G  +D  M NSL++G C     +
Sbjct: 292 ANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFC-----Q 346

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE--MGHIPRT 405
              +++A++ ++       + +  TY I+I+ L      DEA I L   +E  +  IP T
Sbjct: 347 AGRVQEAWKFWDS-AGFAGLRNLRTYNIMIKGLFDSGMVDEA-IELWDLLEKDVACIPDT 404

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT----SYDMLITKLDQLEKSYDACA 461
           +TF  +I  LC  G  +KA    F ++E A++  +     SY  +I  L  + +  DA  
Sbjct: 405 VTFGTLIHGLCQNGFANKA----FTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVK 460

Query: 462 LYGAALKQGVIP 473
           +Y    K G  P
Sbjct: 461 VYEKMDKDGCKP 472


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 193/388 (49%), Gaps = 11/388 (2%)

Query: 88  FNDLLMALV---MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +N+L+  L    ML E E+ +K   +      APN  +++I+I  YC   +  +A   + 
Sbjct: 13  YNNLISCLCKAGMLAEAESYLKRMPQHC----APNVVSYNIIIDGYCKARNIEKALAFLR 68

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M + G+ P    ++ +V S CK+G + +A++V  +M   GC+P+I  +N LL GL    
Sbjct: 69  EMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRAR 128

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           ++ EA E+  ++ + G KPDV TY  ++ G CK  + +EA+ LL    +  V+P  VT+ 
Sbjct: 129 KIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYT 188

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL +  CK     +   + + M +  C   + +YS L N L + GK+  A  ++ +M R 
Sbjct: 189 TLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRK 248

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
              + +   + ++ GL   S  +   +E A  V E M KK++  D   Y I+I  L K +
Sbjct: 249 NVCMTDNTYSLVVLGL---SKMDGGNVEAAKLVTEMMGKKIA-PDFYAYSILINGLCKAR 304

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           +  EA          G  P  +T+N +++ L    K+  A+ L + M +  ++P   SY+
Sbjct: 305 RPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYN 364

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVI 472
           ++I        + +A  L+   +K G++
Sbjct: 365 LMIRGFCANGDTNEAYCLFQDMIKDGIV 392



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 198/439 (45%), Gaps = 17/439 (3%)

Query: 33  AAASLSTAESLDLKENPRSLQA--QRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           A A L   E L     P +  +  Q F    K   + + +D+F  +   G    + +FN 
Sbjct: 63  ALAFLREMEELGHPPTPHAYSSIVQSFC---KTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           LL  L    +   A + F   +S G  P+  T++ MI   C      EA  +++ M    
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             P   T+T L++ LCK  RL++A EV ++M    C      Y+ L   L   G++ EA 
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN-EAMELLNEAIERGVTPNVVTFNTLFNG 269
            +  ++    +     TY+ V+ G  K+   N EA +L+ E + + + P+   ++ L NG
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILING 299

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            CK   P +   + + M+ R   P  ++Y+TLL GLL   K++ A+ +   M+  G   D
Sbjct: 300 LCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPD 359

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N ++RG C           +AY +F+ M K   V +  TY  +I    K +    A
Sbjct: 360 TCSYNLMIRGFCANG-----DTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSA 414

Query: 390 LIHLHHAIEMGH-----IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
            + L   ++ G       P   T+  +I +LC   ++++A  LL  M +   +PS   ++
Sbjct: 415 WM-LFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWE 473

Query: 445 MLITKLDQLEKSYDACALY 463
           +L+++L +  +  DA  LY
Sbjct: 474 VLLSRLARAGRLDDAFELY 492



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 154/332 (46%), Gaps = 13/332 (3%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M + G  PN   +  L++ LCK+G L EA   L +M +  C PN+ +YN ++ G C    
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARN 59

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           +E+A   L  ++  G  P  + Y++++  FCK G  ++AM++  E   +G  P++V FN 
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G  +     +   L + M  R C PD ++Y+T++ GL KW K+  AV + + M +  
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                    +L+  LC  +      L+ AY+VFEKM +         Y ++   L +  K
Sbjct: 180 VSPTFVTYTTLIDHLCKFT-----RLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGK 234

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID----KALLLLFLMYEHAKIPSRT 441
             EA        +M      +T N     + G  K+D    +A  L+  M      P   
Sbjct: 235 LVEA---SRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFY 291

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +Y +LI  L +  +  +A  ++     +G+ P
Sbjct: 292 AYSILINGLCKARRPGEAKEMFQEMRGRGISP 323



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 150/317 (47%), Gaps = 9/317 (2%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA K++  M      P+   ++IL+N LCK+ R  EA E+  +M   G  P + TYN LL
Sbjct: 273 EAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLL 332

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
           +GL    ++++A E+   + + G  PD  +Y  ++ GFC  G +NEA  L  + I+ G+ 
Sbjct: 333 EGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIV 392

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK----RNCLPDKISYSTLLNGLLKWGKIRP 313
            N  T+N +  G+ K+        L K M+     +   P+  +Y  L++ L K  ++  
Sbjct: 393 LNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEE 452

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A  +   M   GF    ++   LL  L          L+DA++++++M++       G+ 
Sbjct: 453 AFKLLSAMRDKGFVPSLKIWEVLLSRLA-----RAGRLDDAFELYKEMSRINCQQLVGSS 507

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
            I++  + +    DEA   L    + G +P   T++ ++  LC +GK D+A  L+  +  
Sbjct: 508 NILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVR 567

Query: 434 HAKIPSRTSYDMLITKL 450
             K P       L+  L
Sbjct: 568 DGKRPENQGLRQLLGAL 584



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 9/325 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A K  +E     +AP+ + +SI+I   C      EA+++   M   G  P V T+  L+ 
Sbjct: 274 AAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLE 333

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            L  + +L++A+E+   M   G  P+  +YN +++G C  G   EAY +  ++  DG+  
Sbjct: 334 GLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVL 393

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAI----ERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           + +TY  ++ GF K    + A  L         ++   PN+ T+  L +  CK     + 
Sbjct: 394 NTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEA 453

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             LL  M+ +  +P    +  LL+ L + G++  A  ++KEM R   +      N LL G
Sbjct: 454 FKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDG 513

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           +       +  +++A    ++MT    V D  TY  ++  L    K D+A   +   +  
Sbjct: 514 IL-----RRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRD 568

Query: 400 GHIPRTITFNNVIQALCGEGKIDKA 424
           G  P       ++ ALC +G    A
Sbjct: 569 GKRPENQGLRQLLGALCAQGDFQGA 593



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 4/207 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG----LAPNSWTFSIMI 127
           +F  + KDG   +   +N +++  +      +A   F    S       APN +T+ I+I
Sbjct: 382 LFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILI 441

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C  +   EA K++  M D G+ P++  + +L++ L ++GRL +A E+  +M RI C+
Sbjct: 442 SSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQ 501

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
             + + N LL G+   G V+EA + L  + + G+ PD +TY  ++ G C  G++++A +L
Sbjct: 502 QLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKL 561

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEG 274
           + E +  G  P       L    C +G
Sbjct: 562 VEELVRDGKRPENQGLRQLLGALCAQG 588



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 139/320 (43%), Gaps = 39/320 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA    E  ++F  ++  G + +V  +N LL  L+   + + A++        G  P++ 
Sbjct: 302 KARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTC 361

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGY------------------------------ 151
           ++++MIR +C   D  EA  +   M  +G                               
Sbjct: 362 SYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRM 421

Query: 152 ---------HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
                     PN+ T+ IL++SLCK+ +++EA ++L  M   G  P+++ +  LL  L  
Sbjct: 422 QSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLAR 481

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            GR+++A+E+   +     +  V +   ++DG  + G  +EA + L +  + G+ P+  T
Sbjct: 482 AGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFT 541

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           ++ L  G C +G   +   L++ + +    P+      LL  L   G  + A   +  + 
Sbjct: 542 YDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLP 601

Query: 323 RFGFEVDERMMNSLLRGLCM 342
             G EV   M N+L+   C+
Sbjct: 602 SVGVEVTLGMHNTLVTSCCL 621


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 204/443 (46%), Gaps = 65/443 (14%)

Query: 56  RFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           + VDR KA        +F  +   G   S   +N L+   +   + +  V+   E S++ 
Sbjct: 353 QVVDRAKA--------VFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHD 404

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVID-----------------CMFD----NGYHPN 154
           L P+ + +++++   C      EAR + D                 C+FD     G  PN
Sbjct: 405 LEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPN 464

Query: 155 VTTFTILVNSLCKSGRLKEAL---------------------------EVLDQMGRIGCK 187
           V  +  L+++LCK GR+ +A+                           E+LDQ    G +
Sbjct: 465 VVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQ----GIR 520

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            ++  +N L+  LC  GRV EA  ++  +   G++PDV +Y  ++DG C  GR++EA +L
Sbjct: 521 LDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKL 580

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L+  +  G+ PN  T+NTL +GYCK         LL+ M      PD ++Y+T+L+GL +
Sbjct: 581 LDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQ 640

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G+   A  ++  M+    + D    N +L GLC     + + +++A+++F+ +  K   
Sbjct: 641 TGRFSEAKELYLNMINSRTQWDMYTYNIILNGLC-----KNNCVDEAFKMFQSLCSKGLQ 695

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
               T+ I+I  L KG K ++A+         G +P   T+  + + L  EG +++  +L
Sbjct: 696 LHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVL 755

Query: 428 LFLMYEHAKIPSRTSYDMLITKL 450
              M E+   P+    + L+ + 
Sbjct: 756 FSAMEENGTAPNSRMLNALVRRF 778



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 208/496 (41%), Gaps = 93/496 (18%)

Query: 52  LQAQRFV-DRIKASPL--KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN------EQE 102
           LQ +RF+ DR ++  L   + + +FD +       SV+ FN LL A+   +      E +
Sbjct: 115 LQLERFIADRAQSGSLASHDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQ 174

Query: 103 TAVKFFSE---ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
             +  F       S  +AP+  T+SI+I C+C          V   +   G+  N   F 
Sbjct: 175 LGISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFN 234

Query: 160 ILVNSLCKSGRLKEALEVLD-QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
            L+  LC + RL EA  +L  +M   GC PN+ +YN L+KG C   R EEA E+L  + +
Sbjct: 235 QLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMAD 294

Query: 219 D--------------------------------------GLKPDVYTYTAVMDGFCKVGR 240
           D                                      G+ PDV TY  V+DG CK   
Sbjct: 295 DQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQV 354

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A  +  + +++GV P+  T+N L +GY   G   + V LL+ M   +  PD   Y+ 
Sbjct: 355 VDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYAL 414

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LL+ L K G+   A +IF  ++R G + D                    ++++A  +F+K
Sbjct: 415 LLDYLCKNGRCTEARNIFDSVIRKGIKPDA-------------------MIDEAVCIFDK 455

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI----------------------- 397
           M ++    +   YG +I  L K  + D+A++  +  I                       
Sbjct: 456 MRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEML 515

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
           + G     + FN ++  LC EG++ +A  L+ LM      P   SY+ L+       ++ 
Sbjct: 516 DQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTD 575

Query: 458 DACALYGAALKQGVIP 473
           +A  L    +  G+ P
Sbjct: 576 EAAKLLDVMVSIGLKP 591



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 133/294 (45%), Gaps = 15/294 (5%)

Query: 44  DLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET 103
           DL    R ++AQR ++      L  R+         G    V  +N L+    +    + 
Sbjct: 532 DLCREGRVMEAQRLIE------LMLRV---------GVRPDVISYNTLVDGHCLTGRTDE 576

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A K      S GL PN +T++ ++  YC      +A  ++  M  NG  P+V T+  +++
Sbjct: 577 AAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILH 636

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            L ++GR  EA E+   M     + ++ TYN +L GLC    V+EA++M  ++ + GL+ 
Sbjct: 637 GLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQL 696

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            + T+  ++    K G+  +AM+L       G+ P+V T+  +     KEG+  +   L 
Sbjct: 697 HIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLF 756

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
             M++    P+    + L+   L  G I  A +   ++    F ++    + L+
Sbjct: 757 SAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI 810



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/211 (19%), Positives = 93/211 (44%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + +   +   +  +G    V  +N +L  L        A + +    +     + +
Sbjct: 605 KARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMY 664

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I++   C  N   EA K+   +   G   ++ TF I++ +L K G+ ++A+++   +
Sbjct: 665 TYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATI 724

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+++TY  + + L   G +EE   +   ++ +G  P+     A++  F   G  
Sbjct: 725 SAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDI 784

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           + A   L++  E+  +    T + L + Y +
Sbjct: 785 SRAGAYLSKLDEKNFSLEASTASMLISLYSR 815


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 194/400 (48%), Gaps = 20/400 (5%)

Query: 35  ASLSTAESLDLKENP-RSLQAQRFVDRI-----------KASPLKERIDIFDSIKKDGTN 82
           A L  A+ +DL E   RS   +R    I           +   L++  D+   IK  G  
Sbjct: 164 AGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLA 223

Query: 83  WSVSDFNDLLMALVMLNEQETAVK---FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
            SV+ +N L+                    E    G++P + TF ++I  YC  ++   A
Sbjct: 224 PSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAA 283

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            +V + M   G   +V T+  L++ LC  G+++E ++++++M  +G  PN  T+ C+LKG
Sbjct: 284 VRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKG 343

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C  G + +A + +  +    ++PDV  Y  ++D + ++G+  +AM +     ++G++PN
Sbjct: 344 FCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPN 403

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           V T+N L  G+ + G      GLL  MK++    D ++Y+ L+  L   G++R AV +  
Sbjct: 404 VTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLD 463

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM   G E +    N++++G C     +K  ++ AY++  +M K     +  TY + I+ 
Sbjct: 464 EMSEVGLEPNHLTYNTIIQGFC-----DKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKY 518

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
             +  K DEA   L+  ++   +P  IT+  + + +  +G
Sbjct: 519 FCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 203/423 (47%), Gaps = 21/423 (4%)

Query: 46  KENPRSLQAQRFVDRIKASPL-KERIDI----FDSIKKDGTNWSVSDFNDLLMALVMLNE 100
           + +PR   +   V+ + A  +  +R+D+    F S  +   +  +  FN ++  L  + +
Sbjct: 147 ESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206

Query: 101 QETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN---DFFEARKVIDCMFDNGYHPNVTT 157
              A     +  ++GLAP+  T++ +I  YC K    + +    ++  M + G  P   T
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVT 266

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F +L+N  CK+     A+ V ++M + G   ++ TYN L+ GLC  G+VEE  +++  ++
Sbjct: 267 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           + GL P+  T+  V+ GFCK G   +A + ++   ER V P+VV +N L + Y + G   
Sbjct: 327 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKME 386

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
             + + + M K+   P+  +Y+ L+ G  + G  R A  +  EM   G E D    N L+
Sbjct: 387 DAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL---GKGKKTDEALIHLH 394
             LC K    K     A ++ ++M++     +  TY  +I+     G  K   E    + 
Sbjct: 447 GALCCKGEVRK-----AVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME 501

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
              +  ++   +T+N  I+  C  GK+D+A  LL  M +   +P+  +Y+ +  K   +E
Sbjct: 502 KCRKRANV---VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI--KEGMME 556

Query: 455 KSY 457
           K Y
Sbjct: 557 KGY 559



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 8/255 (3%)

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +P   +  A++ G     R + A +    A+ R V+P++ TFNT+ +G C+ G   K   
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLK---WGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
           + K +K     P   +Y++L++G  K    G +     + KEMV  G          L+ 
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           G C  S         A +VFE+M ++       TY  +I  L    K +E +  +    +
Sbjct: 273 GYCKNSNTAA-----AVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
           +G  P  ITF  V++  C +G +  A   +  M E    P    Y++LI    +L K  D
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387

Query: 459 ACALYGAALKQGVIP 473
           A A+  A  K+G+ P
Sbjct: 388 AMAVKEAMAKKGISP 402


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 197/426 (46%), Gaps = 6/426 (1%)

Query: 49  PRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D  IK   L+    ++  + + G   +V  +N LL  L            
Sbjct: 221 PNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAV 280

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E +S  + P+ +T+SI+   +    D      + +     G      T +IL+N LCK
Sbjct: 281 LDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCK 340

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G++ +A EVL  +   G       YN L+ G C +G +E A+ +   +K+  ++PD  T
Sbjct: 341 DGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHIT 400

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y A+++G  KV R  EA +L+ E  + GV P+V TFNTL + Y + G   K   +L  M+
Sbjct: 401 YNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQ 460

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           ++   P+ +SY +++N   K GKI  AV+I  +M         ++ N+++      ++ E
Sbjct: 461 EKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAII-----DAYIE 515

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
               + A+ + EKM          TY ++I+ L K  +  EA   L      G  P  I+
Sbjct: 516 CGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVIS 575

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I A C     D+AL L   M++    PS  +Y ML + L    + ++   LY   L
Sbjct: 576 YNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQML 635

Query: 468 KQGVIP 473
            + V+P
Sbjct: 636 DKDVVP 641



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 185/413 (44%), Gaps = 12/413 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           + A  L E + +   +  DG    +   +N ++  L        AVK F E     + PN
Sbjct: 163 VVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPN 222

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             T++ MI  +  K D     ++   M  +G  PNV T+ +L++ LC++GR+ E   VLD
Sbjct: 223 HITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLD 282

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M      P+  TY+ L  G    G  +    +       G+K   YT + +++G CK G
Sbjct: 283 EMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDG 342

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           + ++A E+L   +  G+    V +NTL NGYC+ G       + + MK R   PD I+Y+
Sbjct: 343 KISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYN 402

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L+NGL K  +I  A  +  EM + G        N+L+      ++     LE  + +  
Sbjct: 403 ALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLI-----DAYGRAGQLEKCFIILS 457

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            M +K    +  +YG ++    K  K  EA+  L        +P    +N +I A    G
Sbjct: 458 DMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECG 517

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLI------TKLDQLEKSYDACALYGAA 466
             D+A +L   M      PS  +Y++LI      +++ + E+  D+   YG A
Sbjct: 518 STDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLA 570



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 169/349 (48%), Gaps = 5/349 (1%)

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
            + +T +  F E+   G+   ++T SI++   C      +A +V+  + ++G       +
Sbjct: 307 GDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIY 366

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
             L+N  C+ G L+ A  +  QM     +P+  TYN L+ GL  V R+ EA+++++ ++ 
Sbjct: 367 NTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEK 426

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +G+ P V T+  ++D + + G+  +   +L++  E+G+ PNVV++ ++ N +CK G  ++
Sbjct: 427 NGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILE 486

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            V +L  M  ++ LP    Y+ +++  ++ G    A  + ++M   G        N L++
Sbjct: 487 AVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIK 546

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           GLC +S      + +A ++ + +       D  +Y  +I        TD AL       +
Sbjct: 547 GLCKQSQ-----ISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWK 601

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            G  P   T+  +  +L G G++ +   L   M +   +P    Y++++
Sbjct: 602 CGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMV 650



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 129/269 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  D+   ++K+G N SV  FN L+ A     + E      S+    GL PN  
Sbjct: 410 KVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVV 469

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++  ++  +C      EA  ++D MF     P    +  ++++  + G   +A  + ++M
Sbjct: 470 SYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKM 529

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+I TYN L+KGLC   ++ EA E+L +++N GL PDV +Y  ++   C    +
Sbjct: 530 KSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNT 589

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+EL  E  + G+ P+  T+  LF+     G   +   L + M  ++ +P    Y+ +
Sbjct: 590 DRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIM 649

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           ++   K G+     ++ KEM   G  V +
Sbjct: 650 VDAYAKCGEESKVEALRKEMSDKGIAVGD 678



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 153/374 (40%), Gaps = 66/374 (17%)

Query: 166 CKSGR-----------------------------------LKEALEVLDQMGRIGC-KPN 189
              GR                                   L EA+ +L +MG  G   PN
Sbjct: 128 LSLGRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPN 187

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             +YN ++ GL   G   +A ++   +    + P+  TY  ++DG  K G       L +
Sbjct: 188 AFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWS 247

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           + +  G+ PNV+T+N L +G C+ G   +   +L  M  R  +PD  +YS L +G  + G
Sbjct: 248 QMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTG 307

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC---------------------------- 341
             +  +S+F+E V+ G ++     + LL GLC                            
Sbjct: 308 DSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYN 367

Query: 342 --MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
             +  + +   LE A+ +F++M  ++   D  TY  +I  LGK ++  EA   +    + 
Sbjct: 368 TLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKN 427

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P   TFN +I A    G+++K  ++L  M E    P+  SY  ++    +  K  +A
Sbjct: 428 GVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEA 487

Query: 460 CALYGAALKQGVIP 473
            A+      + V+P
Sbjct: 488 VAILDDMFIKDVLP 501



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 68/154 (44%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           + +K  G   S+  +N L+  L   ++   A +      +YGLAP+  +++ +I   C +
Sbjct: 527 EKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYR 586

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
           ++   A ++   M+  G  P+  T+ +L +SL  +GR+ E   +  QM      P    Y
Sbjct: 587 SNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIY 646

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           N ++      G   +   +   + + G+    YT
Sbjct: 647 NIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYT 680


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 214/436 (49%), Gaps = 12/436 (2%)

Query: 41  ESLDLKENPRSLQAQRFVDRI--KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVML 98
           ES+D+  N   LQ    + +I  K   +++ I + D +        V  +  L+  +V +
Sbjct: 143 ESMDVSPN---LQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKV 199

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF-DNGYHPNVTT 157
            +   A+K F E S  G+  +   ++++I  +    D+ + +++ + +  D   +PNV T
Sbjct: 200 GDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVT 259

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           + I++N LCK GR  E+LE+ ++M +   + ++ TY+ L+ GLC  G ++ A  +   + 
Sbjct: 260 YNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIV 319

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
              L  D  T+ A+++GFC+ G+  E+ EL    + +     VV++N L  G  + G   
Sbjct: 320 ESSLVVDAVTHNAMLNGFCRAGKIKESFELW-MVMGKENCQTVVSYNILIKGLFENGKVE 378

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           + + + +L+ K+ C P+  +Y  L++GL K G++  A+ IFKE      ++D    +S++
Sbjct: 379 EAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMV 438

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            GLC     ++  +++A  +  +M K+    DP     +I    +  K ++A+       
Sbjct: 439 DGLC-----KEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREME 493

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             G  P  +++N +I+ LC   +  +A   +  M E    P   +  +L+  L Q +K  
Sbjct: 494 CKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIE 553

Query: 458 DACALYGAALKQGVIP 473
            A  L+  AL +G  P
Sbjct: 554 MALNLWQQALDKGFKP 569



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 196/412 (47%), Gaps = 6/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K     E ++I++ + K+     +  ++ L+  L      + AV+ + E     L  ++ 
Sbjct: 269 KCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAV 328

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T + M+  +C      E+ ++   M        V ++ IL+  L ++G+++EA+ + + +
Sbjct: 329 THNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELL 387

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC+P   TY  L+ GLC  GR+ +A ++    ++   K D Y Y++++DG CK GR 
Sbjct: 388 CKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRM 447

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA+ ++N+  +RG   +    N L NG+ +       +   + M+ + C P  +SY+TL
Sbjct: 448 DEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTL 507

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + GL K  +   A S  KEM+   ++ D    + L+ GLC    +EK  +E A  ++++ 
Sbjct: 508 IKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLC----QEKK-IEMALNLWQQA 562

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K    D   Y I++  L    K ++AL    H      +P  +T N +++ L      
Sbjct: 563 LDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDY 622

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +KA  +   + +    P   SY++ I  L    +  DA      AL +G++P
Sbjct: 623 EKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILP 674



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 165/326 (50%), Gaps = 5/326 (1%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++I+I+         EA  + + +   G  P  TT+ +L++ LCK+GRL +AL++  + 
Sbjct: 363 SYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEA 422

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                K +   Y+ ++ GLC  GR++EA  ++  +   G K D +    +++GF +  + 
Sbjct: 423 EDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKL 482

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+    E   +G +P +V++NTL  G CK     +    +K M ++   PD I+ S L
Sbjct: 483 EDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLL 542

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL +  KI  A++++++ +  GF+ D  M N L+ GLC         LEDA Q++  M
Sbjct: 543 MDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVC-----KLEDALQLYSHM 597

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +   V +  T   ++  L K +  ++A       ++ G  P  I++N  I+ LC   +I
Sbjct: 598 KRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRI 657

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI 447
             A+  L        +P+  ++++L+
Sbjct: 658 SDAIEFLNDALNRGILPTAVTWNILV 683



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 159/313 (50%), Gaps = 7/313 (2%)

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           +G  P   +++ ++  +   N++  A             PN+ T+ IL+   CK  ++++
Sbjct: 110 FGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEK 169

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           A+ +LD M     KP++ +Y  L+ G+  VG +  A ++   +   G+  DV  Y  ++D
Sbjct: 170 AISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLID 229

Query: 234 GFCKVGRSNEAMELLNEAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           GF K G  ++  E+    ++   V PNVVT+N + NG CK G   + + + + M K    
Sbjct: 230 GFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNERE 289

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
            D  +YS+L++GL + G I  AV ++KE+V     VD    N++L G C         ++
Sbjct: 290 KDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFC-----RAGKIK 344

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           ++++++  M K+   T   +Y I+I+ L +  K +EA+       + G  P + T+  +I
Sbjct: 345 ESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLI 403

Query: 413 QALCGEGKIDKAL 425
             LC  G+++KAL
Sbjct: 404 HGLCKNGRLNKAL 416



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 147/314 (46%), Gaps = 5/314 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E I I++ + K G     + +  L+  L        A+K F EA       +++ +S 
Sbjct: 377 VEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSS 436

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           M+   C +    EA  +++ M   GY  +      L+N   ++ +L++A+    +M   G
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P I +YN L+KGLC   R  EAY  +  +     KPD+ T + +MDG C+  +   A+
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  +A+++G  P++  +N L +G C        + L   MK+  C+P+ ++ +TL+ GL
Sbjct: 557 NLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGL 616

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K      A  I+  +++ G   D    N  ++GLC  S      + DA +       + 
Sbjct: 617 YKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCS-----RISDAIEFLNDALNRG 671

Query: 366 SVTDPGTYGIVIRT 379
            +    T+ I++R 
Sbjct: 672 ILPTAVTWNILVRA 685



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 155/302 (51%), Gaps = 7/302 (2%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G  P V ++  L+N+  +      A         +   PN+QTYN L+K  C   ++E+A
Sbjct: 111 GCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKA 170

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             +L  + +  LKPDV++Y  +++G  KVG    A+++ +E   RGV  +V  +N L +G
Sbjct: 171 ISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDG 230

Query: 270 YCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           + K G   KG  +  +L+K  +  P+ ++Y+ ++NGL K G+   ++ I++ M +   E 
Sbjct: 231 FFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREK 290

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D    +SL+ GLC     E   ++ A +V++++ +   V D  T+  ++    +  K  E
Sbjct: 291 DMFTYSSLIHGLC-----EAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKE 345

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           +   L   +   +    +++N +I+ L   GK+++A+ +  L+ +    P  T+Y +LI 
Sbjct: 346 SF-ELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIH 404

Query: 449 KL 450
            L
Sbjct: 405 GL 406



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 108/206 (52%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++AS L++ I+ F  ++  G + ++  +N L+  L        A  F  E       P+ 
Sbjct: 477 VRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDM 536

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T S+++   C +     A  +     D G+ P++T + IL++ LC   +L++AL++   
Sbjct: 537 ITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSH 596

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R  C PN+ T N L++GL  V   E+A E+   +  DGL PD+ +Y   + G C   R
Sbjct: 597 MKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSR 656

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTL 266
            ++A+E LN+A+ RG+ P  VT+N L
Sbjct: 657 ISDAIEFLNDALNRGILPTAVTWNIL 682


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 165/344 (47%), Gaps = 5/344 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A  F+ +    GL P +  F++++R      +   A+ V D M   G    V +F  +++
Sbjct: 100 ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS 159

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            +C++G L  A  +  +M   G  P++ TY  L++GLC VGR+E+A  +   +   G+KP
Sbjct: 160 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 219

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +   +T ++D  CK G +   +EL  E  ERGV P+ VT+N + NG C+        G++
Sbjct: 220 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 279

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M+     PD ++Y+TL++G  K  ++  A+ I + MV  G  +DE    +L+ GL   
Sbjct: 280 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKA 339

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                    DA +V  +M +     D  TY +VI    +       L  L      G  P
Sbjct: 340 GRS-----ADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 394

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             +T+N ++   C  G++  A +LL  M      P   +Y++L+
Sbjct: 395 GVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILL 438



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 169/363 (46%), Gaps = 43/363 (11%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           D ++   L    ++FD ++  G   +V  FN ++  +    + + A       S  G+ P
Sbjct: 125 DLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTP 184

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           + +T+  +I+  C      +AR V + M   G  PN   FTIL+++ CK G  +  LE+ 
Sbjct: 185 DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELH 244

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC-- 236
            +M   G +P+  TYN ++ GLC    ++ A  +++ +++ GL+PD  TYT ++DG+C  
Sbjct: 245 REMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKE 304

Query: 237 ---------------------------------KVGRSNEAMELLNEAIERGVTPNVVTF 263
                                            K GRS +A  +L E +E G+ P+  T+
Sbjct: 305 EELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTY 364

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             + + +C++G    G+ LLK M+ +   P  ++Y+ ++NG  K G+++ A  +   M+ 
Sbjct: 365 TMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMIN 424

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D+   N LL G C K  +  D       + E  + K +V D G Y  ++  + K 
Sbjct: 425 IGVSPDDITYNILLDGHC-KHGKVTD-------IEELKSAKGTVPDLGVYTSIVGEIVKK 476

Query: 384 KKT 386
           K T
Sbjct: 477 KTT 479



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 5/334 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+  LV L E  +A   F E  S G+     +F+ MI   C   D   A  +   M 
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 178

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  P+V T+  L+  LC+ GR+++A  V ++M   G KPN   +  L+   C  G  E
Sbjct: 179 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 238

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
              E+   ++  G++PD  TY A+++G C+      A  ++ E    G+ P+ VT+ TL 
Sbjct: 239 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 298

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +GYCKE      + + + M       D+++Y+ L++GL K G+   A  +  EM+  G E
Sbjct: 299 DGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLE 358

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D      ++   C K   +  L     ++ ++M  K       TY +++    K  +  
Sbjct: 359 PDNTTYTMVIDAFCRKGDVKTGL-----RLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 413

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            A + L+  I +G  P  IT+N ++   C  GK+
Sbjct: 414 NADMLLNAMINIGVSPDDITYNILLDGHCKHGKV 447



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA    + + + GL P+   +  +M    ++G    A  + +E   RGV   VV+FNT+ 
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G C+ G       L + M +    PD  +Y  L+ GL + G+I  A  +F++M   G +
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +  +   L+   C K   E  L     ++  +M ++    D  TY  ++  L + +   
Sbjct: 219 PNAVVFTILIDAHCKKGDAETML-----ELHREMRERGVRPDAVTYNAIVNGLCRARDLK 273

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            A   +      G  P T+T+  +I   C E ++D A+ +   M          +Y  LI
Sbjct: 274 SASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALI 333

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
           + L +  +S DA  + G  ++ G+ P
Sbjct: 334 SGLSKAGRSADAERVLGEMMEAGLEP 359


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 199/410 (48%), Gaps = 27/410 (6%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  ++E +D   +I++ G +   + +  ++M L+                  G   N ++
Sbjct: 121 AEDMREAVDAIQAIRRVGGDLRKACWLLMMMPLM------------------GCRRNEYS 162

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I+  C      EA  ++  M  +G   N+ T+T+L+  LCK GR+  A  VL++M 
Sbjct: 163 YTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMP 222

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G  P++ TYN ++ G C  GR+++A  +   ++ +G  PD +TY  ++ G C   + +
Sbjct: 223 LRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCG-EKPD 281

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA ELLN+AI RG TP V+TF  + NGYCK       + +   M   NC  D  +Y  L+
Sbjct: 282 EAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLI 341

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           N L+K  + + A     EM   G   +  +  S++ G C     +   +  A +VF  M 
Sbjct: 342 NVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYC-----KVGKVGAALEVFRLME 396

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
            +    +  TY  +I  L + +K  +A+  +    E G  P  IT+  +IQ  C + + D
Sbjct: 397 HEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 456

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            A  L  +M ++   P   +Y++L   L +  ++ +A   Y   +++GV+
Sbjct: 457 NAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA---YSFLVRKGVV 503



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 179/387 (46%), Gaps = 30/387 (7%)

Query: 115 GLAPNSWTFSIMIRCYCN-KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
           G  P+ WT++I+I   C  K D  EA ++++     G+ P V TFT ++N  CK+ R+ +
Sbjct: 260 GCNPDDWTYNILIYGLCGEKPD--EAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           AL V   M    CK ++Q Y  L+  L    R +EA E +  +  +GL P+V  YT+++D
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIID 377

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G+CKVG+   A+E+       G  PN  T+++L  G  ++    K + L+  M++    P
Sbjct: 378 GYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITP 437

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL--- 350
             I+Y+TL+ G  K  +   A  +F+ M + G   DE+  N L   LC     E+     
Sbjct: 438 GVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL 497

Query: 351 --------------LEDAYQ----------VFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
                         L D +           + EKM  +    D  TY ++++ L K KK 
Sbjct: 498 VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKL 557

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           +EAL  L      G     + +  +I  +  EGK D A  +   M      PS T+Y + 
Sbjct: 558 NEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVF 617

Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
           I+   ++ +  +A  L G   + GV P
Sbjct: 618 ISSYCKIGQIEEAEHLIGEMERDGVAP 644



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 148/305 (48%), Gaps = 6/305 (1%)

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           G L++A  +L  M  +GC+ N  +Y  L++GLC    V EA  +L+ +  DG   +++TY
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           T ++ G CK GR + A  +L E   RGV P+V T+N + +GYCK G     +G+  LM++
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
             C PD  +Y+ L+ GL    K   A  +  + +  GF        +++ G C     + 
Sbjct: 259 NGCNPDDWTYNILIYGLCG-EKPDEAEELLNDAIVRGFTPTVITFTNIINGYC-----KA 312

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
           + ++DA +V   M       D   YG++I  L K  +  EA   +      G  P  + +
Sbjct: 313 ERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIY 372

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
            ++I   C  GK+  AL +  LM      P+  +Y  LI  L Q +K + A AL     +
Sbjct: 373 TSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 432

Query: 469 QGVIP 473
            G+ P
Sbjct: 433 DGITP 437



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 173/412 (41%), Gaps = 53/412 (12%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+   L + + +   +++DG    V  +  L+      +E + A + F      GL P+ 
Sbjct: 415 IQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 474

Query: 121 WTFSIMIRCYCNKNDFFEA-----RK---------------------------VIDCMFD 148
             ++++    C      EA     RK                           +I+ M +
Sbjct: 475 QAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVN 534

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G   +  T+++L+ +LCK  +L EAL +LDQM   G K NI  Y  ++  +   G+ + 
Sbjct: 535 EGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDH 594

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  M   + + G KP   TYT  +  +CK+G+  EA  L+ E    GV P+VVT+N   N
Sbjct: 595 AKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFIN 654

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL----------------NGLLKWGKIR 312
           G    G   +    LK M   +C P+  +Y  LL                +G+  W ++ 
Sbjct: 655 GCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELD 714

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
               + + MV+ G        +S++ G C  +      LE+A  +F+ M  K    +   
Sbjct: 715 TVWQLLERMVKHGLNPTAVTYSSIIAGFCKAT-----RLEEACVLFDHMRGKDISPNEEI 769

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           Y ++I+     K   +A+  +   IE G  P   +++ +I  LC EG  DKA
Sbjct: 770 YTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKA 821



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 182/443 (41%), Gaps = 50/443 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +   +++F  ++ +G   +   ++ L+  L+   +   A+   ++    G+ P   
Sbjct: 381 KVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVI 440

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I+  C K++F  A ++ + M  NG  P+   + +L ++LCKSGR +EA   L + 
Sbjct: 441 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRK 500

Query: 182 GRI--------------------------------GCKPNIQTYNCLLKGLCYVGRVEEA 209
           G +                                GCK +  TY+ LL+ LC   ++ EA
Sbjct: 501 GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEA 560

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             +L  +   G+K ++  YT ++    K G+ + A  + NE I  G  P+  T+    + 
Sbjct: 561 LSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISS 620

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YCK G   +   L+  M++    PD ++Y+  +NG    G +  A S  K M+    E +
Sbjct: 621 YCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPN 680

Query: 330 ERMMNSLLRGLC--------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
                 LL+                 M +W E   L+  +Q+ E+M K        TY  
Sbjct: 681 YWTYWILLKHFLKMSLVDAHYVDTSGMWNWIE---LDTVWQLLERMVKHGLNPTAVTYSS 737

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I    K  + +EA +   H       P    +  +I+  C      KA+  +  M E  
Sbjct: 738 IIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFG 797

Query: 436 KIPSRTSYDMLITKLDQLEKSYD 458
             P   SY  LI  L   E  YD
Sbjct: 798 FQPHLESYHYLIVGLCD-EGDYD 819



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/432 (22%), Positives = 178/432 (41%), Gaps = 24/432 (5%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK    KE  +    +  +G   +V  +  ++     + +   A++ F      G  PN+
Sbjct: 345 IKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNA 404

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           WT+S +I          +A  +I  M ++G  P V T+T L+   CK      A  + + 
Sbjct: 405 WTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEM 464

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + G  P+ Q YN L   LC  GR EEAY  L+     G+     TYT+++DGF K G 
Sbjct: 465 MEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGN 521

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           ++ A  L+ + +  G   +  T++ L    CK+    + + +L  M       + ++Y+ 
Sbjct: 522 TDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTI 581

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++ ++K GK   A S+F EM+  G +         +   C     +   +E+A  +  +
Sbjct: 582 IISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYC-----KIGQIEEAEHLIGE 636

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ------- 413
           M +     D  TY + I   G     D A   L   I+    P   T+  +++       
Sbjct: 637 MERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSL 696

Query: 414 ---------ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
                     +    ++D    LL  M +H   P+  +Y  +I    +  +  +AC L+ 
Sbjct: 697 VDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFD 756

Query: 465 AALKQGVIPQRK 476
               + + P  +
Sbjct: 757 HMRGKDISPNEE 768



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 158/362 (43%), Gaps = 45/362 (12%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            + ++I     K  F EA++ +  MF NG  PNV  +T +++  CK G++  ALEV   M
Sbjct: 336 AYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLM 395

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG------- 234
              GC+PN  TY+ L+ GL    ++ +A  ++  ++ DG+ P V TYT ++ G       
Sbjct: 396 EHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 455

Query: 235 ----------------------------FCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                                        CK GR+ EA   L   + +GV    VT+ +L
Sbjct: 456 DNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSL 512

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G+ K G       L++ M    C  D  +YS LL  L K  K+  A+SI  +M   G 
Sbjct: 513 VDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGV 572

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           +      N +   + +    ++   + A  +F +M          TY + I +  K  + 
Sbjct: 573 KC-----NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQI 627

Query: 387 DEALIHLHHAIEM-GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           +EA  HL   +E  G  P  +T+N  I      G +D+A   L  M + +  P+  +Y +
Sbjct: 628 EEAE-HLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWI 686

Query: 446 LI 447
           L+
Sbjct: 687 LL 688



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 16/277 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E + I D +   G   ++  +  ++  ++   + + A   F+E  S G  P++ 
Sbjct: 553 KQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAT 612

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+++ I  YC      EA  +I  M  +G  P+V T+ + +N     G +  A   L +M
Sbjct: 613 TYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRM 672

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAY----------------EMLMNVKNDGLKPDV 225
               C+PN  TY  LLK    +  V+  Y                ++L  +   GL P  
Sbjct: 673 IDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTA 732

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
            TY++++ GFCK  R  EA  L +    + ++PN   +  L    C      K V  +  
Sbjct: 733 VTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTD 792

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           M +    P   SY  L+ GL   G    A S+F +++
Sbjct: 793 MIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLL 829



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/261 (20%), Positives = 107/261 (40%), Gaps = 17/261 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E   +   +++DG    V  +N  +     +   + A             PN W
Sbjct: 623 KIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYW 682

Query: 122 TFSIMIRCYC----------------NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           T+ I+++ +                 N  +     ++++ M  +G +P   T++ ++   
Sbjct: 683 TYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGF 742

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK+ RL+EA  + D M      PN + Y  L+K  C +    +A   + ++   G +P +
Sbjct: 743 CKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHL 802

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIE-RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
            +Y  ++ G C  G  ++A  L  + +       N V +  L +G  K G       LL 
Sbjct: 803 ESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLS 862

Query: 285 LMKKRNCLPDKISYSTLLNGL 305
            M+ R+C  D  +YS + + +
Sbjct: 863 AMENRHCQIDSETYSMVTDNI 883


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 185/360 (51%), Gaps = 9/360 (2%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           + P+  TF+++I  YC + +  +A  +++  F  G+ P+V T T +V  LCK+GR+ E +
Sbjct: 295 VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGV 354

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           EVL+++  +G   ++  YN L+KG C +G+ +  + +L +++  G  P+V TY  +  G+
Sbjct: 355 EVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGY 414

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK-RNCLPD 294
           C  G  + A++L N+    G+  N +T++TL  G C  G    G  +L+LM++ R     
Sbjct: 415 CDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGG 474

Query: 295 KIS-YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           +IS Y++++ GL K  +   A+    +M +      +R +  L  G C      +  + D
Sbjct: 475 RISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRIL--GFC-----NEGSIGD 527

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A +V+++M K+  V     Y  +I    +     EA   ++  ++ G+ P   TFN +I 
Sbjct: 528 AKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALIS 587

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A CG+GK+  AL L+  M     +P   SY  ++  L        A  L+   +++ ++P
Sbjct: 588 AFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILP 647



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 196/415 (47%), Gaps = 15/415 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY-GLAPNS 120
           +A  +++ I + D I K G N S+  FN +L  LV   + + A +F+ +     G++ + 
Sbjct: 175 RARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVK-EDIDLAREFYRKKMMMNGVSGDD 233

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +TF I+++  C  N   +A K++  M   G  PN   +  ++++LCK+G++  A  ++++
Sbjct: 234 YTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNE 293

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M     +P+  T+N L+   C    + +A  +L    + G  PDV T T V+   CK GR
Sbjct: 294 M----VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGR 349

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             E +E+L      G   +VV +NTL  G+C  G    G  +LK M+ + CLP+  +Y+ 
Sbjct: 350 VTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNI 409

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L +G    G +  A+ +F +M   G   +    ++L+RGLC         +ED +++ E 
Sbjct: 410 LASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLC-----SGGRMEDGFKILEL 464

Query: 361 M--TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           M  ++  +      Y  +I  L K  + +EAL  L    ++   PR +  +  I   C E
Sbjct: 465 MEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKL--FPRAVDRSLRILGFCNE 522

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G I  A  +   M +   +PS   Y  LI    Q     +A  L    +  G  P
Sbjct: 523 GSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFP 577



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 144/326 (44%), Gaps = 36/326 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + E +++ + ++  G    V  +N L+    ML + +   +   +    G  PN  
Sbjct: 346 KAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVD 405

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+   YC+      A  + + M  +G + N  T+  L+  LC  GR+++  ++L+ M
Sbjct: 406 TYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELM 465

Query: 182 --GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN--------------------- 218
              R G    I  YN ++ GL    + EEA E L  ++                      
Sbjct: 466 EESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSI 525

Query: 219 ------------DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                       +G  P V  Y  ++ GFC+ G   EA EL+NE ++ G  P   TFN L
Sbjct: 526 GDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNAL 585

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            + +C +G     + L++ M  R CLPD  SYS +++ L   G  + AV +F +MV    
Sbjct: 586 ISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDI 645

Query: 327 EVDERMMNSLLRGLCMKS-WEEKDLL 351
             D    NS+L  L  ++ W E D L
Sbjct: 646 LPDYSTWNSMLLCLTQETVWLEGDNL 671



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 162/354 (45%), Gaps = 20/354 (5%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           S +  L+  L      ET  +   E  SS G  P+   F  ++R         +  KV+D
Sbjct: 128 STYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLD 187

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI-----GCKPNIQTYNCLLKG 199
            +   G +P++  F  +++ L     +KE +++  +  R      G   +  T+  L+KG
Sbjct: 188 LITKFGENPSLKIFNSILDVL-----VKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKG 242

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC   R+ +A+++L  +K+ G  P+   Y  ++   CK G+   A  L+NE +E    P+
Sbjct: 243 LCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----PS 298

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VTFN L + YC+E   ++ + LL+       +PD ++ + ++  L K G++   V + +
Sbjct: 299 DVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLE 358

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            +   G  VD    N+L++G CM    +       ++V + M  K  + +  TY I+   
Sbjct: 359 RVESMGGVVDVVAYNTLIKGFCMLGKAKV-----GHRVLKDMEIKGCLPNVDTYNILASG 413

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
                  D A+   +     G     +T++ +I+ LC  G+++    +L LM E
Sbjct: 414 YCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEE 467



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 39/257 (15%)

Query: 66  LKERIDIFDSIKKDGTNWS-------------------------------------VSDF 88
           L   ID+F+ +K DG NW+                                     +S +
Sbjct: 420 LDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPY 479

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N ++  L   N+ E A++F ++     L P +   S+ I  +CN+    +A++V D M  
Sbjct: 480 NSIIYGLYKKNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIK 537

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G  P+V  +  L++  C+ G ++EA E++++M   G  P   T+N L+   C  G+V  
Sbjct: 538 EGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGS 597

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A +++ ++   G  PD+ +Y+ ++D  C  G   +A+ L  + +E+ + P+  T+N++  
Sbjct: 598 ALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLL 657

Query: 269 GYCKEGTPMKGVGLLKL 285
              +E   ++G  L  L
Sbjct: 658 CLTQETVWLEGDNLFHL 674



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 20/301 (6%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           N +T+  L++ LC   R +   EVLD+M   IG  P+   +  +++GL     V +  ++
Sbjct: 126 NQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKV 185

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-----GVTPNVVTFNTLF 267
           L  +   G  P +  + +++D   K     E ++L  E   +     GV+ +  TF  L 
Sbjct: 186 LDLITKFGENPSLKIFNSILDVLVK-----EDIDLAREFYRKKMMMNGVSGDDYTFGILM 240

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G C          LL++MK R   P+ + Y+T+++ L K GK+  A S+  EMV    E
Sbjct: 241 KGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMV----E 296

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
             +   N L+   C    +E++L++ A  + EK      V D  T   V+  L K  +  
Sbjct: 297 PSDVTFNVLISAYC----QEENLVQ-ALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVT 351

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           E +  L     MG +   + +N +I+  C  GK      +L  M     +P+  +Y++L 
Sbjct: 352 EGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILA 411

Query: 448 T 448
           +
Sbjct: 412 S 412



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD+  + T++ GL +   +R  + +   + +FG     ++ NS+L  L     E+ DL  
Sbjct: 161 PDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVK---EDIDLAR 217

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           + Y+  +KM       D  T+GI+++ L    +  +A   L      G  P T+ +N +I
Sbjct: 218 EFYR--KKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMI 275

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            ALC  GK+ +A  L+  M E    PS  ++++LI+   Q E    A  L   +   G +
Sbjct: 276 HALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFV 331

Query: 473 P 473
           P
Sbjct: 332 P 332


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 208/403 (51%), Gaps = 16/403 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + + E + IFD +++   +  V ++  L+ AL  L   + AV  F++  + G+ P+ +
Sbjct: 354 KKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIF 413

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            FS ++   C  + + +A K+   + D G   N   F IL+ +LC+ GR+ EA  ++D M
Sbjct: 414 VFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLM 473

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R+  +P++ +YN L+ G C  GR++EA ++L  + + GLKPD +TY  ++ G+CK  R 
Sbjct: 474 LRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRI 533

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG--TPMKGVGLLKLMKKRNCLPDKISYS 299
           ++A  L  E + +G+TP VVT+NT+ +G  + G     K + L  +  +R C  D  +Y+
Sbjct: 534 DDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKC--DIYTYT 591

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            +LNGL +   +  A  +F+ +     ++D   +N ++ G  +K   +    EDA  +F 
Sbjct: 592 IILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMI-GALLKGGRK----EDAMDLFA 646

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM-GHIPRTITFNNVIQALCGE 418
            ++    V D  TY ++   L K    +E L  L  A+E  G  P +   N +++ L   
Sbjct: 647 TISAYGLVPDVETYRLIAENLIKEGSLEE-LDELFSAMEENGTAPNSRMLNALVRWLLHR 705

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLIT-----KLDQLEKS 456
           G I +A + L  + E       ++  MLI+     +  QL KS
Sbjct: 706 GDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKS 748



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 195/436 (44%), Gaps = 19/436 (4%)

Query: 50  RSLQAQRFVD---RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVML---NEQET 103
           R L+ +R +    R  +  L + + +FD +       SV  FN LL  +      +  E 
Sbjct: 13  RCLELERVIAGRARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASEL 72

Query: 104 AVKFFSE---ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT-FT 159
            V  F+      S  +AP+S T++I+I C+C              +   G+  N T  F 
Sbjct: 73  VVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFG 132

Query: 160 ILVNSLCKSGRLKEALEVL-DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
            L+  LC + R+ EA ++L  +M   GC  N+ +YN LLKGLC   R EEA E++  + +
Sbjct: 133 QLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMAD 192

Query: 219 DG---LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           DG     P+V TYT V+DG CK    + A  +    I++GV PN  T+  L +GY   G 
Sbjct: 193 DGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGK 252

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             + V +L+ M      PD + Y+ LL+ L K G+   A +IF  ++R G +    +   
Sbjct: 253 WKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGI 312

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           LL G     +  +  L + +   + M +     D   + I+     K    DEA+     
Sbjct: 313 LLHG-----YATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDK 367

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
             +    P  + +  +I ALC  G++D A+L    M      P    +  L+  L  ++K
Sbjct: 368 MRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDK 427

Query: 456 SYDACALYGAALKQGV 471
              A  L+   L QG+
Sbjct: 428 WEKAEKLFFEVLDQGI 443



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 198/436 (45%), Gaps = 49/436 (11%)

Query: 81  TNWSVSD---FNDLLMALVMLNEQETAVK-FFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           T WS+++   F  LL  L      + A          +G   N  +++I+++  CN+   
Sbjct: 121 TGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRA 180

Query: 137 FEARKVIDCMFDNG---YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
            EA +++  M D+G   + PNV T+T +++ LCK+  +  A  V   M   G +PN  TY
Sbjct: 181 EEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTY 240

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
            CL+ G    G+ +E  +ML  +   GL+PD   Y  ++D  CK GR  EA  + +  I 
Sbjct: 241 TCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIR 300

Query: 254 RGVTPNVVT-----------------------------------FNTLFNGYCKEGTPMK 278
           +G+ P+V                                     FN +FN Y K+    +
Sbjct: 301 KGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDE 360

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            + +   M+++   P  ++Y  L++ L K G++  AV  F +M+  G   D  + +SL+ 
Sbjct: 361 AMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVY 420

Query: 339 GLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
           GLC +  WE+ + L      FE + + + + +   + I++  L +  +  EA   +   +
Sbjct: 421 GLCTVDKWEKAEKL-----FFEVLDQGIRL-NAAFFNILMCNLCREGRVMEAQRLIDLML 474

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
            +   P  I++N ++   C  G+ID+A  LL +M      P   +Y+ L+    +  +  
Sbjct: 475 RVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRID 534

Query: 458 DACALYGAALKQGVIP 473
           DA +L+   L +G+ P
Sbjct: 535 DAYSLFREMLMKGLTP 550



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 171/370 (46%), Gaps = 5/370 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F      G+ P+   + I++  Y  +    E    +D M  NG  P+   F I+ N
Sbjct: 291 ARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFN 350

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +  K   + EA+ + D+M +    P +  Y  L+  LC +GRV++A      + N+G+ P
Sbjct: 351 AYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTP 410

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D++ +++++ G C V +  +A +L  E +++G+  N   FN L    C+EG  M+   L+
Sbjct: 411 DIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLI 470

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            LM + +  PD ISY+TL++G    G+I  A  +   MV  G + DE   N+LL G C  
Sbjct: 471 DLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYC-- 528

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              +   ++DAY +F +M  K       TY  ++  L +  +  EA     + I      
Sbjct: 529 ---KARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKC 585

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
              T+  ++  LC    +D+A  +   +          + +++I  L +  +  DA  L+
Sbjct: 586 DIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLF 645

Query: 464 GAALKQGVIP 473
                 G++P
Sbjct: 646 ATISAYGLVP 655



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 185/418 (44%), Gaps = 40/418 (9%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  +IFDS+ + G    V+ +  LL              F       G++P+   F+IM 
Sbjct: 290 EARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMF 349

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             Y  K    EA  + D M      P V  +  L+++LCK GR+ +A+   +QM   G  
Sbjct: 350 NAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVT 409

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK------------------------- 222
           P+I  ++ L+ GLC V + E+A ++   V + G++                         
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRL 469

Query: 223 ----------PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
                     PDV +Y  ++DG C  GR +EA +LL+  +  G+ P+  T+NTL +GYCK
Sbjct: 470 IDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCK 529

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                    L + M  +   P  ++Y+T+L+GL + G+   A  ++  M+    + D   
Sbjct: 530 ARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYT 589

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
              +L GLC       + +++A+++F+ +  K    D  T  I+I  L KG + ++A+  
Sbjct: 590 YTIILNGLC-----RNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDL 644

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                  G +P   T+  + + L  EG +++   L   M E+   P+    + L+  L
Sbjct: 645 FATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWL 702


>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 5/279 (1%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M + G   +V  F  L+N LC+ GR+ EA  ++D+M   G +PN  TY  ++ G+C +G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            + A  +L  +    +K DV  YTA++D  CK G  ++A  L  E  ++G+ PNV+T+N 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + +G C  G       LL+ M + N  PD ++++ L+N  +K GKI  A  +++EM+   
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              D    NSL+ G C  S      L+DA  +F+ M  K    +  T   +I    + K+
Sbjct: 181 IFPDTITYNSLIDGFCKHS-----RLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKR 235

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            D+ +  LH  +  G +P ++++N +I   C  G ++ A
Sbjct: 236 VDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAA 274



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 136/286 (47%), Gaps = 5/286 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V  FN L+  L        A          G  PN  T+  ++   C   D   A
Sbjct: 5   GCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSA 64

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             ++  M ++    +V  +T +++ LCK G   +A  +  +M   G  PN+ TYNC++ G
Sbjct: 65  LNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDG 124

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C  G+  +A ++L ++    + PDV T+ A+++ F K G+ +EA EL  E + R + P+
Sbjct: 125 CCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPD 184

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            +T+N+L +G+CK         +  LM  +   P+ I+ +TL+ G  +  ++   + +  
Sbjct: 185 TITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLH 244

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
           EM+R G   D    N+L+ G C     +   L  A  +F++M  +V
Sbjct: 245 EMLRRGLVPDSVSYNTLIHGFC-----QAGDLNAAQDLFQEMISQV 285



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 134/273 (49%), Gaps = 15/273 (5%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R L+A+  VDR+                ++G   +   +  ++  +  + + ++A+    
Sbjct: 25  RVLEAEALVDRMV---------------ENGHQPNEVTYGTIVNGMCKMGDTDSALNLLR 69

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           +     +  +   ++ +I   C      +A+ +   M D G  PNV T+  +++  C  G
Sbjct: 70  KMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYG 129

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +  +A ++L  M      P++ T+N L+      G++ EA E+   +    + PD  TY 
Sbjct: 130 KWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYN 189

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           +++DGFCK  R ++A  + +  + +G +PNV+T NTL  G C+      G+ LL  M +R
Sbjct: 190 SLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRR 249

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
             +PD +SY+TL++G  + G +  A  +F+EM+
Sbjct: 250 GLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMI 282



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 7/223 (3%)

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +E+G   +VV FNTL NG C+EG  ++   L+  M +    P++++Y T++NG+ K G  
Sbjct: 2   VEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDT 61

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+++ ++M     + D  +  +++  LC      K     A  +F +M  K    +  
Sbjct: 62  DSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSK-----AQNLFTEMHDKGIFPNVL 116

Query: 372 TYGIVIR-TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
           TY  +I      GK TD   + L   IE    P  +TFN +I A   EGKI +A  L   
Sbjct: 117 TYNCMIDGCCSYGKWTDAEQL-LRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYRE 175

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M      P   +Y+ LI    +  +  DA  ++   + +G  P
Sbjct: 176 MLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSP 218



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 84/184 (45%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  +   G   +V  +N ++       +   A +   +     + P+  TF+ +I  +
Sbjct: 101 NLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAF 160

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             +    EA ++   M      P+  T+  L++  CK  RL +A  + D M   G  PN+
Sbjct: 161 VKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNV 220

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            T N L+ G C   RV++  ++L  +   GL PD  +Y  ++ GFC+ G  N A +L  E
Sbjct: 221 ITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQE 280

Query: 251 AIER 254
            I +
Sbjct: 281 MISQ 284



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 17/145 (11%)

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           MV  G + D    N+L+ GLC     E  +LE A  + ++M +     +  TYG ++  +
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLC----REGRVLE-AEALVDRMVENGHQPNEVTYGTIVNGM 55

Query: 381 GKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
            K   TD AL +L   ++  HI    + +  +I  LC +G   KA  L   M++    P+
Sbjct: 56  CKMGDTDSAL-NLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPN 114

Query: 440 RTSYDMLITKLDQLEKSYDACALYG 464
             +Y+ +I          D C  YG
Sbjct: 115 VLTYNCMI----------DGCCSYG 129


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 165/344 (47%), Gaps = 5/344 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A  F+ +    GL P +  F++++R      +   A+ V D M   G    V +F  +++
Sbjct: 224 ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS 283

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            +C++G L  A  +  +M   G  P++ TY  L++GLC VGR+E+A  +   +   G+KP
Sbjct: 284 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 343

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +   +T ++D  CK G +   +EL  E  ERGV P+ VT+N + NG C+        G++
Sbjct: 344 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 403

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M+     PD ++Y+TL++G  K  ++  A+ I + MV  G  +DE    +L+ GL   
Sbjct: 404 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKA 463

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                    DA +V  +M +     D  TY +VI    +       L  L      G  P
Sbjct: 464 GRS-----ADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 518

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             +T+N ++   C  G++  A +LL  M      P   +Y++L+
Sbjct: 519 GVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILL 562



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 169/363 (46%), Gaps = 43/363 (11%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           D ++   L    ++FD ++  G   +V  FN ++  +    + + A       S  G+ P
Sbjct: 249 DLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTP 308

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           + +T+  +I+  C      +AR V + M   G  PN   FTIL+++ CK G  +  LE+ 
Sbjct: 309 DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELH 368

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC-- 236
            +M   G +P+  TYN ++ GLC    ++ A  +++ +++ GL+PD  TYT ++DG+C  
Sbjct: 369 REMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKE 428

Query: 237 ---------------------------------KVGRSNEAMELLNEAIERGVTPNVVTF 263
                                            K GRS +A  +L E +E G+ P+  T+
Sbjct: 429 EELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTY 488

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             + + +C++G    G+ LLK M+ +   P  ++Y+ ++NG  K G+++ A  +   M+ 
Sbjct: 489 TMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMIN 548

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   D+   N LL G C K  +  D       + E  + K +V D G Y  ++  + K 
Sbjct: 549 IGVSPDDITYNILLDGHC-KHGKVTD-------IEELKSAKGTVPDLGVYTSIVGEIVKK 600

Query: 384 KKT 386
           K T
Sbjct: 601 KTT 603



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 5/334 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+  LV L E  +A   F E  S G+     +F+ MI   C   D   A  +   M 
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 302

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  P+V T+  L+  LC+ GR+++A  V ++M   G KPN   +  L+   C  G  E
Sbjct: 303 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 362

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
              E+   ++  G++PD  TY A+++G C+      A  ++ E    G+ P+ VT+ TL 
Sbjct: 363 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 422

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +GYCKE      + + + M       D+++Y+ L++GL K G+   A  +  EM+  G E
Sbjct: 423 DGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLE 482

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D      ++   C K   +  L     ++ ++M  K       TY +++    K  +  
Sbjct: 483 PDNTTYTMVIDAFCRKGDVKTGL-----RLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 537

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            A + L+  I +G  P  IT+N ++   C  GK+
Sbjct: 538 NADMLLNAMINIGVSPDDITYNILLDGHCKHGKV 571



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA    + + + GL P+   +  +M    ++G    A  + +E   RGV   VV+FNT+ 
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G C+ G       L + M +    PD  +Y  L+ GL + G+I  A  +F++M   G +
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +  +   L+   C K   E  L     ++  +M ++    D  TY  ++  L + +   
Sbjct: 343 PNAVVFTILIDAHCKKGDAETML-----ELHREMRERGVRPDAVTYNAIVNGLCRARDLK 397

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            A   +      G  P T+T+  +I   C E ++D A+ +   M          +Y  LI
Sbjct: 398 SASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALI 457

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
           + L +  +S DA  + G  ++ G+ P
Sbjct: 458 SGLSKAGRSADAERVLGEMMEAGLEP 483


>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
          Length = 547

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 180/351 (51%), Gaps = 10/351 (2%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTI 160
           + A    ++ S  G     + ++ ++          +A  + +    +G Y P+V +F +
Sbjct: 161 DAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNV 220

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           ++  +C+ G  ++ALE++++M   GC P+  T+N L+ GLC   +V + +E+L  ++ DG
Sbjct: 221 VIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDG 280

Query: 221 L-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           +  P+  TYT+V+ G+CK G+  +AM + N+ +E G  PN VT+N L NGY K       
Sbjct: 281 VCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESA 340

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           V + + +  R+C PD +++S+L++G  + G++  A  I+KEM     + +    + ++  
Sbjct: 341 VRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHS 400

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAI 397
           LC     +++   +A  +  ++  +  +  P T  Y  VI  L KG K DEA + +    
Sbjct: 401 LC-----KQNRSAEALDILRELNMRTDIA-PQTFIYNPVIDILCKGGKVDEANLIVTDMK 454

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           E G  P   T+  +I   C +G+I +A+ L   M E    P   + +  ++
Sbjct: 455 EKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNITVNSFVS 505



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 193/407 (47%), Gaps = 36/407 (8%)

Query: 103 TAVKFFSEASSYGLA--PNSWTFSIMIRCYCNKNDFFEARKVIDCMFD-NGYHPNVTTFT 159
           +A++ FS   S  L+  P+  ++  +I   C      +A K+ D M D +GY P    F+
Sbjct: 89  SALRIFSALHSPPLSVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFS 148

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            +  S   +G L  A  +L +  R+GC      YN LL  L   GR ++A  +  +   D
Sbjct: 149 FVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQD 208

Query: 220 GL-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           GL  PDV+++  V+ G C++G   +A+EL+    E G +P+ +T N L +G C+     K
Sbjct: 209 GLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNK 268

Query: 279 GVGLLKLMKKRN-CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG------------ 325
           G  +L+ +++   C+P+ ++Y+++++G  K GK+  A+S++ +M+  G            
Sbjct: 269 GHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLI 328

Query: 326 --------FEVDERMMNSLLRGLC----------MKSWEEKDLLEDAYQVFEKMTKKVSV 367
                    E   RM   L+   C          +  +     L+DA +++++M      
Sbjct: 329 NGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQ 388

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHA-IEMGHIPRTITFNNVIQALCGEGKIDKALL 426
            +  T+ I+I +L K  ++ EAL  L    +     P+T  +N VI  LC  GK+D+A L
Sbjct: 389 PNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANL 448

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++  M E    P + +Y +LI       +  +A  L+   ++ G  P
Sbjct: 449 IVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRP 495



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 151/314 (48%), Gaps = 43/314 (13%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGL-APNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           +N LL +L+     + AV  F      GL +P+ W+F+++I+  C   +F +A ++++ M
Sbjct: 182 YNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVERM 241

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG-CKPNIQTYNCLLKGLCYVGR 205
            + G  P+  T  ILV+ LC++ ++ +  EVL ++ R G C PN  TY  ++ G C  G+
Sbjct: 242 TEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGK 301

Query: 206 VEEA------------------YEMLMNVKNDGL-----------------KPDVYTYTA 230
           +E+A                  Y +L+N     L                  PDV T+++
Sbjct: 302 MEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSS 361

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR- 289
           ++DG+C+ G+ ++A  +  E     + PNV TF+ + +  CK+    + + +L+ +  R 
Sbjct: 362 LIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRT 421

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
           +  P    Y+ +++ L K GK+  A  I  +M   G   D+     L+ G CMK      
Sbjct: 422 DIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGR---- 477

Query: 350 LLEDAYQVFEKMTK 363
            + +A  +F KM +
Sbjct: 478 -IPEAITLFHKMVE 490



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 116/216 (53%), Gaps = 1/216 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++ + +++ + + GT  +   +N L+       + E+AV+ + +       P+  
Sbjct: 298 KAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVV 357

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS +I  YC      +A+++   M  +   PNV TF+I+++SLCK  R  EAL++L ++
Sbjct: 358 TFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILREL 417

Query: 182 G-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             R    P    YN ++  LC  G+V+EA  ++ ++K  G  PD YTYT ++ G C  GR
Sbjct: 418 NMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGR 477

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
             EA+ L ++ +E G  P+ +T N+  +   K G P
Sbjct: 478 IPEAITLFHKMVEAGCRPDNITVNSFVSCVLKAGMP 513



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 135/266 (50%), Gaps = 5/266 (1%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAV 105
           +P ++     VD + +A  + +  ++   +++DG    +   +  ++       + E A+
Sbjct: 247 SPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAM 306

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
             +++    G  PN+ T++++I  Y    D   A ++   +      P+V TF+ L++  
Sbjct: 307 SVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGY 366

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML--MNVKNDGLKP 223
           C+ G+L +A  +  +MG    +PN+ T++ ++  LC   R  EA ++L  +N++ D + P
Sbjct: 367 CRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTD-IAP 425

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
             + Y  V+D  CK G+ +EA  ++ +  E+G  P+  T+  L  G+C +G   + + L 
Sbjct: 426 QTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLF 485

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWG 309
             M +  C PD I+ ++ ++ +LK G
Sbjct: 486 HKMVEAGCRPDNITVNSFVSCVLKAG 511


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 188/385 (48%), Gaps = 5/385 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+   V   + E A K F E S + L PNS T++ +I  +C   +  EA +++D M 
Sbjct: 283 YNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMV 342

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G  PN  T+  L+N L K+        +L++M   G + +  +Y  ++ GLC  G +E
Sbjct: 343 SHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLE 402

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA ++L ++    + PDV T++ +++GF +VG+ N A E++ +  + G+ PN + ++TL 
Sbjct: 403 EAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLI 462

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
             YCK G   + +    +M     + D  + + L+    ++GK+  A      M R G +
Sbjct: 463 YNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLD 522

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +    + ++ G         D L+ A+ VF+KM          TYG +++ L  G   +
Sbjct: 523 PNSVTFDCIINGY----GNSGDALK-AFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHIN 577

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EAL   H    + +    + FN  + + C  G +  A+ L+  M  +  +P   +Y  LI
Sbjct: 578 EALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLI 637

Query: 448 TKLDQLEKSYDACALYGAALKQGVI 472
             L +  K   A  L G A+++G++
Sbjct: 638 AGLCKKGKIVAALLLSGKAIEKGLL 662



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 185/400 (46%), Gaps = 5/400 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G N SV   N +L +LV   + +    FF    + G+ P+  TF+I++   C +  F  A
Sbjct: 135 GLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNA 194

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             ++  M ++G +P   T+  L+N  CK GR K A +++D M   G   ++ TYN  +  
Sbjct: 195 GFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDN 254

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC   R  + Y +L  ++ + + P+  TY  ++ GF + G+   A ++ +E     + PN
Sbjct: 255 LCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPN 314

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            +T+NTL  G+C  G   + + L+ +M      P++++Y  LLNGL K  +     SI +
Sbjct: 315 SITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILE 374

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            M   G  V      +++ GLC     +  +LE+A Q+ + M K     D  T+ ++I  
Sbjct: 375 RMRMGGVRVSHISYTAMIDGLC-----KNGMLEEAVQLLDDMLKVSVNPDVVTFSVLING 429

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
             +  K + A   +    + G +P  I ++ +I   C  G + +AL    +M     +  
Sbjct: 430 FFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVAD 489

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
             + ++L+    +  K  +A        + G+ P     D
Sbjct: 490 HFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFD 529



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 185/423 (43%), Gaps = 44/423 (10%)

Query: 67  KERIDIFDSIKK----DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           ++++D+F S  K     G    V+ FN LL AL    + + A     +    G+ P + T
Sbjct: 153 EQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVT 212

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ ++  YC K  +  A ++IDCM   G   +V T+ + +++LC+  R  +   +L +M 
Sbjct: 213 YNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMR 272

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           R    PN  TYN L+ G    G++E A ++   +    L P+  TY  ++ G C  G   
Sbjct: 273 RNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIG 332

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGY-------------------------------- 270
           EA+ L++  +  G+ PN VT+  L NG                                 
Sbjct: 333 EALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMI 392

Query: 271 ---CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              CK G   + V LL  M K +  PD +++S L+NG  + GKI  A  I  +M + G  
Sbjct: 393 DGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLV 452

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +  + ++L+   C   +     L++A   +  M     V D  T  +++ T  +  K +
Sbjct: 453 PNGILYSTLIYNYCKMGY-----LKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLE 507

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA   ++H   MG  P ++TF+ +I      G   KA  +   M      PS  +Y  L+
Sbjct: 508 EAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLL 567

Query: 448 TKL 450
             L
Sbjct: 568 KGL 570



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 184/419 (43%), Gaps = 12/419 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   LKE ++ +  +   G        N L+       + E A  F +  S  GL PNS 
Sbjct: 467 KMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSV 526

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF  +I  Y N  D  +A  V D M   G+ P++ T+  L+  LC  G + EAL+     
Sbjct: 527 TFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFH-- 584

Query: 182 GRIGCKPNIQ---TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            R+ C PN      +N  L   C  G + +A  ++  +  +   PD +TYT ++ G CK 
Sbjct: 585 -RLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKK 643

Query: 239 GRSNEAMELLNEAIERGV-TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           G+   A+ L  +AIE+G+ +PN   + +L +G  K G     + + + M  ++  PD ++
Sbjct: 644 GKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVA 703

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           ++ +++   + GK      I   M       +    N LL G     + ++  +   + +
Sbjct: 704 FNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHG-----YAKRHAMARCFML 758

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           ++ M +   + D  ++  +I    + K  D A+  L      GH+    TFN +I   C 
Sbjct: 759 YKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCE 818

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
             ++ KA  L+  M +   IP+  +Y+ L   L +    + A  +    L+ G +P  K
Sbjct: 819 RNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNK 877



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 185/436 (42%), Gaps = 44/436 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+E + + D + K   N  V  F+ L+     + +   A +   +    GL PN  
Sbjct: 397 KNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGI 456

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +S +I  YC      EA      M  +G+  +  T  +LV + C+ G+L+EA   ++ M
Sbjct: 457 LYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHM 516

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R+G  PN  T++C++ G    G   +A+ +   + + G  P ++TY  ++ G C  G  
Sbjct: 517 SRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHI 576

Query: 242 NEAME-----------------------------------LLNEAIERGVTPNVVTFNTL 266
           NEA++                                   L+NE +     P+  T+  L
Sbjct: 577 NEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNL 636

Query: 267 FNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
             G CK+G  +  + L  K ++K    P+   Y++L++GLLK G  R A+ IF+EM+   
Sbjct: 637 IAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKD 696

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            E D    N ++       +  K        +   M  K    +  TY I++    K   
Sbjct: 697 VEPDTVAFNVII-----DQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHA 751

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
                +     I  G +P   +++++I   C     D A+ +L  +     +  R +++M
Sbjct: 752 MARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNM 811

Query: 446 LITKL---DQLEKSYD 458
           LITK    ++++K+++
Sbjct: 812 LITKFCERNEMKKAFE 827



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 170/357 (47%), Gaps = 7/357 (1%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N   F ++IR         +A +    M   G +P+V T  +++ SL K  ++       
Sbjct: 104 NPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFF 163

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
             M   G  P++ T+N LL  LC  G+ + A  +L  ++  G+ P   TY  +++ +CK 
Sbjct: 164 KGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKK 223

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           GR   A +L++    +G+  +V T+N   +  C++    KG  LLK M++    P++I+Y
Sbjct: 224 GRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITY 283

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           +TL++G ++ GKI  A  +F EM  F    +    N+L+ G C         + +A ++ 
Sbjct: 284 NTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGN-----IGEALRLM 338

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT-ITFNNVIQALCG 417
           + M       +  TYG ++  L K  +    +  +   + MG +  + I++  +I  LC 
Sbjct: 339 DVMVSHGLRPNEVTYGALLNGLYKNAEFG-MVSSILERMRMGGVRVSHISYTAMIDGLCK 397

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            G +++A+ LL  M + +  P   ++ +LI    ++ K  +A  +     K G++P 
Sbjct: 398 NGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPN 454



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 150/351 (42%), Gaps = 38/351 (10%)

Query: 41   ESLDLKENPRSLQAQRFVDRIKASPLKERI-DIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
            E L+    P ++     +D+        ++ DI  ++K     ++++ +N LL      +
Sbjct: 691  EMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRH 750

Query: 100  EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
                    + +   +G  P+ +++  +I  YC    F  A K++  +   G+  +  TF 
Sbjct: 751  AMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFN 810

Query: 160  ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            +L+   C+   +K+A E++ QM +    PN+ TYN L  GL       +A+ +L  +   
Sbjct: 811  MLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLES 870

Query: 220  GLKPDVYTYTAVMDGFCKVGRSNEAMELLNE--------------AIERG---------- 255
            G  P    Y  +++G C+VG    AM+L +E              AI RG          
Sbjct: 871  GSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENA 930

Query: 256  -----------VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
                       + P V TF TL + YCKE    K + L  +M+  +   D ++Y+ L++G
Sbjct: 931  IWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISG 990

Query: 305  LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW--EEKDLLED 353
            L   G I  A  +++EM +     +  +   L+   C  ++  E + LL D
Sbjct: 991  LCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRD 1041



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 161/361 (44%), Gaps = 7/361 (1%)

Query: 88   FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            +  L+  L+       A+  F E  +  + P++  F+++I  Y  K    +   ++  M 
Sbjct: 669  YTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMK 728

Query: 148  DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                  N+ T+ IL++   K   +     +   M R G  P+  +++ L+ G C     +
Sbjct: 729  SKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFD 788

Query: 208  EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
             A ++L  +  +G   D +T+  ++  FC+     +A EL+ +  +  V PNV T+N LF
Sbjct: 789  VAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALF 848

Query: 268  NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            NG  +     K   +L+++ +   +P    Y TL+NG+ + G I+ A+ +  EM   G  
Sbjct: 849  NGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGIS 908

Query: 328  VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 M++++RGL          +E+A  V + M +   +    T+  ++    K     
Sbjct: 909  SHNVAMSAIVRGL-----ANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVA 963

Query: 388  EALIHLHHAIEMGHIP-RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
            +AL  L   +E  H+    + +N +I  LC  G I+ A  L   M +    P+ + Y +L
Sbjct: 964  KAL-ELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVL 1022

Query: 447  I 447
            I
Sbjct: 1023 I 1023



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/337 (21%), Positives = 151/337 (44%), Gaps = 9/337 (2%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           L+PN   ++ ++           A  + + M +    P+   F ++++   + G+  +  
Sbjct: 662 LSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVN 721

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           ++L  M       N+ TYN LL G      +   + +  ++   G  PD +++ +++ G+
Sbjct: 722 DILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGY 781

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           C+    + A+++L      G   +  TFN L   +C+     K   L+K M +   +P+ 
Sbjct: 782 CQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNV 841

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDA 354
            +Y+ L NGL++      A  + + ++  G     +   +L+ G+C + + +    L+D 
Sbjct: 842 DTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDE 901

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            +     +  V+++       ++R L   KK + A+  L   +EM  IP   TF  ++  
Sbjct: 902 MKTLGISSHNVAMSA------IVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHV 955

Query: 415 LCGEGKIDKALLLLFLMYEHAKIP-SRTSYDMLITKL 450
            C E  + KAL L  +M EH  +     +Y++LI+ L
Sbjct: 956 YCKEANVAKALELRSIM-EHCHVKLDVVAYNVLISGL 991



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 115/266 (43%), Gaps = 7/266 (2%)

Query: 186 CKPNIQTYNCLLKGLCYVGR-VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           C  N   ++ L++ +C   R V +A +    +   GL P VYT   V+    K  + +  
Sbjct: 101 CNSNPAVFDLLIR-VCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMF 159

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
                  + +G+ P+V TFN L N  C+ G       LL+ M++    P  ++Y+TLLN 
Sbjct: 160 WSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNW 219

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             K G+ + A  +   M   G  VD    N  +  LC  S   K      Y + ++M + 
Sbjct: 220 YCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAK-----GYLLLKRMRRN 274

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +   +  TY  +I    +  K + A            +P +IT+N +I   C  G I +A
Sbjct: 275 MVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEA 334

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKL 450
           L L+ +M  H   P+  +Y  L+  L
Sbjct: 335 LRLMDVMVSHGLRPNEVTYGALLNGL 360


>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
          Length = 586

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 210/428 (49%), Gaps = 13/428 (3%)

Query: 27  NKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKD-GTNWSV 85
           + L VF A   S    L +  +  S Q Q  V   ++    + + +FD +    G +   
Sbjct: 128 SALAVFTALHCS---PLSITPSAHSCQ-QIIVVLCRSGRQADALQLFDQMTTHYGYSPDA 183

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID- 144
              + L+ +    N  + +    S+AS +G    ++ ++ ++     +    +   + + 
Sbjct: 184 RFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFER 243

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            + D  Y P+V +F +++  +C+ G++++ALE++++M   GC P+  T+N ++ GLC   
Sbjct: 244 WIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTN 303

Query: 205 RVEEAYEMLMNVKNDGL-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            V   +E+L  ++ DG+  P+V T+T+V+ G+CK G+  +AM + N+ +  G+ PN VT+
Sbjct: 304 EVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTY 363

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N L NGY K G     V + + M +  C PD +++S+L++G  + G++  A+ I+ +M +
Sbjct: 364 NVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQ 423

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG-TYGIVIRTLGK 382
              + +    + ++  LC     +++  ++A  +  ++  +  +      Y  VI  L K
Sbjct: 424 HRIQPNVYTFSIIIHSLC-----KQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCK 478

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
             K DEA +      E G  P   T+  +I   C + +I +A++    M E    P   +
Sbjct: 479 CGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSIT 538

Query: 443 YDMLITKL 450
            +  I+ L
Sbjct: 539 VNCFISCL 546



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 190/395 (48%), Gaps = 11/395 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASS-YGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
           S      +++ L     Q  A++ F + ++ YG +P++   S ++      N    +  +
Sbjct: 146 SAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATL 205

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ--MGRIGCKPNIQTYNCLLKGL 200
           +    + G       +  L++SL   GR+ + + + ++    R+   P++ ++N ++KG+
Sbjct: 206 LSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVY-SPDVWSFNVVIKGV 264

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT-PN 259
           C VG+V++A E++  +   G  PD  T+  ++DG C+    +   E+L      GV  PN
Sbjct: 265 CRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 324

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VVTF ++ +GYCK G     + +   M     +P+ ++Y+ L+NG  K G +  AV +++
Sbjct: 325 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 384

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           +M R     D    +SL+ G C         L+DA +++  M +     +  T+ I+I +
Sbjct: 385 QMTRLRCPPDVVTFSSLIDGYC-----RCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 439

Query: 380 LGKGKKTDEALIHLHHA-IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
           L K  ++DEA+  L+   +     P+   +N VI  LC  GK+D+A L+   M E    P
Sbjct: 440 LCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 499

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            + +Y +LI       +  +A   +   ++ G  P
Sbjct: 500 DKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSP 534



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 125/285 (43%), Gaps = 43/285 (15%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA-PNS 120
           KA  L ER++ F      G +      N ++  L   NE     +        G+  PN 
Sbjct: 272 KALELVERMNEF------GCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNV 325

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+ +I  YC      +A  V + M  +G  PN  T+ +L+N   K G L  A+EV  Q
Sbjct: 326 VTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQ 385

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R+ C P++ T++ L+ G C  G++++A  +  ++    ++P+VYT++ ++   CK  R
Sbjct: 386 MTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNR 445

Query: 241 SNEAMELLNE------------------------------------AIERGVTPNVVTFN 264
           S+EA+ LLNE                                      E+G  P+  T+ 
Sbjct: 446 SDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYT 505

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
            L  GYC +    + +     M +  C PD I+ +  ++ LLK G
Sbjct: 506 ILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAG 550



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 1/216 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L++ + +++ +   G   +   +N L+     + +  +AV+ + + +     P+  
Sbjct: 337 KAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVV 396

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS +I  YC      +A ++   M  +   PNV TF+I+++SLCK  R  EA+ +L+++
Sbjct: 397 TFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNEL 456

Query: 182 G-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             R    P    YN ++  LC  G+V+EA  +   ++  G +PD YTYT ++ G+C   R
Sbjct: 457 NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSR 516

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            +EA+   +E +E G +P+ +T N   +   K G P
Sbjct: 517 ISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMP 552



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 1/191 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   ++++  + +      V  F+ L+       + + A++ +S+ + + + PN +
Sbjct: 372 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVY 431

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCM-FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           TFSI+I   C +N   EA  +++ +       P    +  +++ LCK G++ EA  +   
Sbjct: 432 TFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKG 491

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC+P+  TY  L+ G C   R+ EA      +   G  PD  T    +    K G 
Sbjct: 492 MEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 551

Query: 241 SNEAMELLNEA 251
            NE   ++  A
Sbjct: 552 PNEVDHVMRLA 562


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 204/443 (46%), Gaps = 32/443 (7%)

Query: 62  KASPLKERIDIFDSIKKDGT-NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           KA      +D+F  +K++G+   +   F+ L++ L  ++    A+  F E    GL  + 
Sbjct: 137 KAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADV 196

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
              + +I C C      +AR+++  M  +    +  T+ ILVN+ C++G++ E    ++ 
Sbjct: 197 NVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMEL 256

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
               GC  +   YN +++G    GR+ EA ++  +       PDV+TY  ++   CK  +
Sbjct: 257 ARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQ 315

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA+ L  EA + GV  +V T++ L + + K G   K + +   M+K  C+PD + Y+ 
Sbjct: 316 LEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNV 375

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR---------------GLCMKSW 345
           L++ L K GK+  A+ + ++M R G   D R  N ++                G+  +  
Sbjct: 376 LISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRK 435

Query: 346 EEKDLL---------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              D++               ++A  +F++M     + D  T+G +I TL K  + ++AL
Sbjct: 436 HSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDAL 495

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                 ++MGH P +  +N +I   C  G++DK   L   M E +  P   +Y +L+   
Sbjct: 496 EQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGF 555

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +   +  A  L    +++G  P
Sbjct: 556 SRRGHTSMAMELLQEMVREGHTP 578



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 176/385 (45%), Gaps = 6/385 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + E     +  + DG   S  ++N ++   +       A + F    +    P+ +
Sbjct: 243 RAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVF 302

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I   C      EA  +       G   +V T++ L+++  K+GR  +ALEV   M
Sbjct: 303 TYNLLIA-LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNM 361

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC P+   YN L+  L   G+V+EA E+L ++   G+ PD  TY  V+D     GR 
Sbjct: 362 QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRY 421

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A         R  +P+VVT+NTL NG  K     +   L   M+   C+PD  ++ TL
Sbjct: 422 EKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTL 481

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K G++  A+     +V+ G   +  + N+L+ G C     +K      Y++F+ M
Sbjct: 482 IDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDK-----GYELFQDM 536

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +     D  TY I++    +   T  A+  L   +  GH P   T+N +I++L   G++
Sbjct: 537 IECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQV 596

Query: 422 DKALLLLFLMYEHAKIPSRTSYDML 446
           + A  L   M      P   +Y  L
Sbjct: 597 EDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 163/348 (46%), Gaps = 41/348 (11%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+   L E   +F+S     +   V  +N LL+AL    + E A+  F EA   G+  + 
Sbjct: 277 IRCGRLAEATQLFESTMTKESVPDVFTYN-LLIALCKSKQLEEALTLFQEAEQGGVVLDV 335

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T+S ++  +       +A +V   M   G  P+   + +L++ L K G++ EALE+L+ 
Sbjct: 336 FTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLED 395

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G  P+ +TYN ++  L   GR E+AY     +K     PDV TY  +++G  K+ R
Sbjct: 396 MNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRR 455

Query: 241 SNEAMELLNE----------------------------AIER-------GVTPNVVTFNT 265
           ++EA +L +E                            A+E+       G  PN   +N 
Sbjct: 456 TDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNA 515

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G+C+ G   KG  L + M + +C PD I+Y+ L+ G  + G    A+ + +EMVR G
Sbjct: 516 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 575

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
                   N L+R L M        +EDAY +F++M  K    D  TY
Sbjct: 576 HTPALATYNVLIRSLSMAGQ-----VEDAYTLFKEMIAKGFNPDMQTY 618



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 180/407 (44%), Gaps = 13/407 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETAVKFFSEA-SSYGLA 117
           +A  L   + + D +++   N+   D   F   +  L  +   E A+  F +   +   A
Sbjct: 65  RAGDLDAAMGMLDDMRRG--NFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCA 122

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY-HPNVTTFTILVNSLCKSGRLKEALE 176
           P+   ++ +I  YC   D   A  +   +   G   PN  +F  LV  LCK  R  +AL 
Sbjct: 123 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 182

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           V  +M   G K ++   N L+   C +G + +A  +L ++       D +TY  +++  C
Sbjct: 183 VFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHC 242

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           + G+ +E    +  A   G   + V +N +  G+ + G   +   L +    +  +PD  
Sbjct: 243 RAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVF 302

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y+ LL  L K  ++  A+++F+E  + G  +D    + L     M ++ +      A +
Sbjct: 303 TYN-LLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYL-----MDAFGKAGRAAKALE 356

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           VF  M K   + D   Y ++I  LGK  K DEAL  L      G +P   T+N VI  L 
Sbjct: 357 VFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLS 416

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             G+ +KA     +M      P   +Y+ L+  L +L ++ +AC L+
Sbjct: 417 SCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLF 463



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 172/362 (47%), Gaps = 9/362 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY-HPNVTTFTILVNSLCKSGRLKE 173
           G+  +  T +  I+ +    D   A  ++D M    +  P+   FT  ++ LC+  R+++
Sbjct: 48  GVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQ 107

Query: 174 ALEVLDQMGRI-GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG-LKPDVYTYTAV 231
           A+ + D M     C P++  YN L+ G C  G  + A +M   +K +G  KP+  ++  +
Sbjct: 108 AMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTL 167

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           +   CK+ R+ +A+ +  E +  G+  +V   NTL +  C+ G   +   LL  M    C
Sbjct: 168 VIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAC 227

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
             D  +Y  L+N   + G++    S F E+ R     D   ++++     ++ +     L
Sbjct: 228 ARDAFTYGILVNAHCRAGQMHEVAS-FMELARH----DGCALSAVNYNFIIQGFIRCGRL 282

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
            +A Q+FE    K SV D  TY ++I  L K K+ +EAL     A + G +    T++ +
Sbjct: 283 AEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYL 341

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           + A    G+  KAL + + M +   +P    Y++LI+ L +  K  +A  L     ++G+
Sbjct: 342 MDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGI 401

Query: 472 IP 473
           +P
Sbjct: 402 MP 403



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 117/242 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +++ + + + G       +N ++  L      E A  FF        +P+  
Sbjct: 382 KQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVV 441

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++          EA  + D M  N   P++TTF  L+++L K+GR+++ALE   ++
Sbjct: 442 TYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARL 501

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            ++G  PN   YN L+ G C  G+V++ YE+  ++      PD  TYT ++ GF + G +
Sbjct: 502 VKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHT 561

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + AMELL E +  G TP + T+N L       G       L K M  +   PD  +YS L
Sbjct: 562 SMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621

Query: 302 LN 303
            N
Sbjct: 622 PN 623



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 145/339 (42%), Gaps = 48/339 (14%)

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR---------------------------- 205
           AL     + + G   +  T   ++K +C +GR                            
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 206 -------VEEAYEMLMNVKNDGL-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-GV 256
                  ++ A  ML +++     +PD   +TA M   C+V R  +AM L ++  E    
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLNGLLKWGKIRPAV 315
            P+VV +NTL  GYCK G   + + + + +K+  +C P+ +S+ TL+  L K  +   A+
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
           ++F+EM+  G + D  + N+L+   C        +L  A ++   MT      D  TYGI
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTC-----RLGMLRQARRLLHHMTAHACARDAFTYGI 236

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           ++    +  +  E    +  A   G     + +N +IQ     G++ +A  L        
Sbjct: 237 LVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKE 296

Query: 436 KIPSRTSYDMLIT--KLDQLEKSYDACALYGAALKQGVI 472
            +P   +Y++LI   K  QLE   +A  L+  A + GV+
Sbjct: 297 SVPDVFTYNLLIALCKSKQLE---EALTLFQEAEQGGVV 332


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 183/387 (47%), Gaps = 15/387 (3%)

Query: 88  FNDLLMALV---MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
            N LLMAL    M  + E+        +S   A N  T++ +I  YC   D   A++ + 
Sbjct: 44  LNTLLMALARHRMFPDMESL-------ASRMPARNLRTYTTLINAYCLAGDIPAAKQHLT 96

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   G  P+   +T  V   C++G L  A  V   M   GC     TY  LL GL   G
Sbjct: 97  SLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAG 156

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            V EA  + + ++ D   PD + Y  ++ G C+ GR+ EA  LL EA+  G  PN+V +N
Sbjct: 157 MVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYN 216

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +GYC  G     + + + M    C P+  +Y+ L++GL K GK+  A+ +F  MV  
Sbjct: 217 ALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA 276

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G E +     +L++G C      +  L+ A+++   M     V +  T+ ++I  L K +
Sbjct: 277 GLEPNVVTYTALIQGQC-----NEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKRE 331

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           K +EA + L   ++ G     + + ++I  LC  GKID A  L+  M     +P   SY 
Sbjct: 332 KVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYS 391

Query: 445 MLITKLDQLEKSYDACALYGAALKQGV 471
            LI  L + +K   A  +    +++G+
Sbjct: 392 SLIDGLCRQKKLSQATLMLEDMMEKGI 418



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 186/400 (46%), Gaps = 6/400 (1%)

Query: 49  PRSLQAQRFV-DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S     FV    +A  L     +F  +   G   +   +  LL  L+       A+  
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAV 164

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F    +   AP++  ++ M+   C      EA  +++    NG+ PN+  +  L++  C 
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCN 224

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G ++ AL+V + M    C PN++TY  L+ GLC  G+VE A  +   +   GL+P+V T
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           YTA++ G C  G    A  LL+     G+ PN  TF+ L +  CK     +    L  + 
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           K+    +++ Y++L++GL K GKI  A  + ++M+  GF  D    +SL+ GLC      
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC-----R 399

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           +  L  A  + E M +K     P TY I+I  L +   ++         I  G  P  +T
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +   +++ C EG+++ A  ++  M +    P+  +Y+ LI
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 188/387 (48%), Gaps = 5/387 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           + A  ++E + +F  ++ D        +  ++  L      E A     EA S G  PN 
Sbjct: 153 LGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNI 212

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             ++ +I  YCN  +   A KV + M  N   PNV T+T L++ LCKSG+++ A+ +  +
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G +PN+ TY  L++G C  G ++ A+ +L  ++ +GL P+ +T++ ++D  CK  +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA   L   +++GV  N V + +L +G CK G       L++ M     +PD  SYS+
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL +  K+  A  + ++M+  G +        ++  L  +        E   ++F+K
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS-----EGPKKIFDK 447

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M       D  TY + +R+  +  + ++A   +   ++ G  P  +T+N +I+     G 
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
           + +A     +M      P+  SY +L+
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLL 534



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 194/392 (49%), Gaps = 10/392 (2%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  ++  + +F+ +  +  + +V  + +L+  L    + E A+  FS     GL PN  T
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I+  CN+     A +++  M  NG  PN  TF++L+++LCK  +++EA   L  + 
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           + G K N   Y  L+ GLC  G+++ A E++  + ++G  PD ++Y++++DG C+  + +
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLS 404

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +A  +L + +E+G+  + VT+  + +   +E        +   M      PD ++Y+  +
Sbjct: 405 QATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFV 464

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
               + G++  A S+  +MV  G   +    N+L+RG     +    L+  A+  FE M 
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG-----YANLGLVSQAFSTFEVMV 519

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT----ITFNNVIQALCGE 418
            K    +  +Y +++R + K   +D + + +    +M  +  +    I +  +I  L  +
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNS-VDIWKIADMKDLQESNYDEIVWKILIYGLLQK 578

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           G + +   LL +M EH   PS T   M+  ++
Sbjct: 579 GSVAEFSSLLSVMKEHGYQPSNTINAMITGEI 610



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 145/305 (47%), Gaps = 11/305 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  ++  + +F  + + G   +V  +  L+         + A +      + GL PN W
Sbjct: 259 KSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS++I   C +    EA+  +  +   G   N   +T L++ LCK+G++  A E++ +M
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  +Y+ L+ GLC   ++ +A  ML ++   G++    TYT ++D   +   S
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
               ++ ++ I  G+ P++VT+      YC+EG       ++  M  R   P+ ++Y+TL
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS--------W---EEKDL 350
           + G    G +  A S F+ MV  G++ +E     LLR +  KS        W   + KDL
Sbjct: 499 IRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDL 558

Query: 351 LEDAY 355
            E  Y
Sbjct: 559 QESNY 563


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 191/426 (44%), Gaps = 6/426 (1%)

Query: 49  PRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D  IK   L+    + D +   G   +   +N LL  L            
Sbjct: 96  PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSAL 155

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E +S  + P+ +T+SI+        D      +      NG      T +IL+N LCK
Sbjct: 156 LDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCK 215

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G++  A EVL  +   G  P    YN L+ G C  G +E A+     +K+  +KPD  T
Sbjct: 216 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 275

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y A+++G CK  R   A +LL E  + GV P V TFNTL + Y + G   K   +L  M+
Sbjct: 276 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 335

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +    P+ +SY +++N   K GKI  AV+I  +M       + ++ N+++      ++ E
Sbjct: 336 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII-----DAYVE 390

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
               + A+ + EKM          TY ++I+ L    +  EA   ++       IP  ++
Sbjct: 391 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 450

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I A C  G IDKAL L   M+++    +  +Y  LI+ L    +  +   LY   +
Sbjct: 451 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 510

Query: 468 KQGVIP 473
           +  V+P
Sbjct: 511 QNNVVP 516



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 177/391 (45%), Gaps = 6/391 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           + A  L E + +   + +DG    +   +N ++  +        AV+ F E +   + PN
Sbjct: 38  VAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPN 97

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             T++ MI  +    D     ++ D M  +G  PN  T+ +L++ LC++GR+ E   +LD
Sbjct: 98  HITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLD 157

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M      P+  TY+ L  GL   G  +    +      +G+    YT + +++G CK G
Sbjct: 158 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 217

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           + + A E+L   +  G+ P  V +NTL NGYC+ G           MK R+  PD I+Y+
Sbjct: 218 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 277

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L+NGL K  +I  A  +  EM   G        N+L+      ++     LE  + V  
Sbjct: 278 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI-----DAYGRTGQLEKCFIVLS 332

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M +     +  +YG ++    K  K  EA+  L        +P    +N +I A    G
Sbjct: 333 EMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHG 392

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             D+A +L+  M  +   PS  +Y++LI  L
Sbjct: 393 PNDQAFILVEKMKSNGISPSIVTYNLLIKGL 423



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 177/370 (47%), Gaps = 12/370 (3%)

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
           DG  +S+     L   L    + +  +  F +    G+    +T SI++   C       
Sbjct: 167 DGFTYSI-----LFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSI 221

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A +V+  + + G  P    +  L+N  C++G L+ A     QM     KP+  TYN L+ 
Sbjct: 222 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 281

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC   R+  A ++LM ++++G+ P V T+  ++D + + G+  +   +L+E  E G+ P
Sbjct: 282 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 341

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           NVV++ ++ N +CK G   + V +L  M  ++ LP+   Y+ +++  ++ G    A  + 
Sbjct: 342 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 401

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           ++M   G        N L++GLC +S      + +A ++   ++    + D  +Y  +I 
Sbjct: 402 EKMKSNGISPSIVTYNLLIKGLCNQSQ-----ISEAEEIINSLSNHRLIPDAVSYNTLIS 456

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
                   D+AL  L   +    I  T+ T++ +I  L G G++++   L   M ++  +
Sbjct: 457 ACCYRGNIDKAL-DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 515

Query: 438 PSRTSYDMLI 447
           PS   +++++
Sbjct: 516 PSNAIHNIMV 525



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 145/295 (49%), Gaps = 5/295 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+       E E A   F +  S  + P+  T++ +I   C       A+ ++  M 
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           DNG +P V TF  L+++  ++G+L++   VL +M   G KPN+ +Y  ++   C  G++ 
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  +L ++ +  + P+   Y A++D + + G +++A  L+ +    G++P++VT+N L 
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 420

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G C +    +   ++  +     +PD +SY+TL++     G I  A+ + + M ++G +
Sbjct: 421 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 480

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
              R  + L+ GL          L +   +++KM +   V     + I++    K
Sbjct: 481 STVRTYHQLISGLGGAGR-----LNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 530



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 125/262 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +    D+   ++ +G N +V  FN L+ A     + E      SE    GL PN  
Sbjct: 285 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 344

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++  ++  +C      EA  ++D MF     PN   +  ++++  + G   +A  ++++M
Sbjct: 345 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 404

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+I TYN L+KGLC   ++ EA E++ ++ N  L PD  +Y  ++   C  G  
Sbjct: 405 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 464

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A++L     + G+   V T++ L +G    G   +   L + M + N +P    ++ +
Sbjct: 465 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM 524

Query: 302 LNGLLKWGKIRPAVSIFKEMVR 323
           +    K+G    A  + KEM++
Sbjct: 525 VEAYSKYGNEIKAEDLRKEMLQ 546



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 121/310 (39%), Gaps = 41/310 (13%)

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPD----------------------------------- 224
           L  +GR  +       + + G +PD                                   
Sbjct: 2   LLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPP 61

Query: 225 -VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
             ++Y  V+ G  + GR  +A+E+ +E  ER V PN +T+NT+ +G+ K G    G  L 
Sbjct: 62  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M      P+ I+Y+ LL+GL + G++    ++  EM       D    + L  GL  +
Sbjct: 122 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS-R 180

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           + + K +L     +F K  K        T  I++  L K  K   A   L   +  G +P
Sbjct: 181 NGDSKAMLS----LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 236

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             + +N +I   C  G+++ A      M      P   +Y+ LI  L + E+  +A  L 
Sbjct: 237 TRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 296

Query: 464 GAALKQGVIP 473
                 GV P
Sbjct: 297 MEMQDNGVNP 306


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 184/359 (51%), Gaps = 5/359 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+  T+ +++   C + D   A  +++ M      P V  +  +++ LCK   + +A
Sbjct: 11  GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L +  +M   G +PN+ TY+ L+  LC  GR  +A  +L ++    + PDV+T++A++D 
Sbjct: 71  LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           F K G+  EA +L +E ++R + P++VT+++L NG+C      +   + + M  ++C PD
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++Y+TL+ G  K+ ++   + +F+EM + G   +    N L++GL    ++  D  + A
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL----FQAGD-CDMA 245

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++F++M       +  TY  ++  L K  K ++A++   +       P   T+N +I+ 
Sbjct: 246 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 305

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +C  GK++    L   +      P   +Y+ +I+   +     +A AL+    + G +P
Sbjct: 306 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 364



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 167/332 (50%), Gaps = 5/332 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++  L      + A+  F E  + G+ PN  T+S +I C CN   + +A +++  M 
Sbjct: 54  YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 113

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +   +P+V TF+ L+++  K G+L EA ++ D+M +    P+I TY+ L+ G C   R++
Sbjct: 114 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 173

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA +M   + +    PDV TY  ++ GFCK  R  E ME+  E  +RG+  N VT+N L 
Sbjct: 174 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 233

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G  + G       + K M      P+ ++Y+TLL+GL K GK+  A+ +F+ + R   E
Sbjct: 234 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 293

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 N ++ G+C     +   +ED + +F  ++ K    D   Y  +I    +    +
Sbjct: 294 PTIYTYNIMIEGMC-----KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 348

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           EA        E G +P +  +N +I+A   +G
Sbjct: 349 EADALFKEMKEDGTLPNSGCYNTLIRARLRDG 380



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 183/384 (47%), Gaps = 11/384 (2%)

Query: 46  KENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA 104
           K  P  L     +D + K   + + +++F  ++  G   +V  ++ L+  L        A
Sbjct: 46  KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 105

Query: 105 VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
            +  S+     + P+ +TFS +I  +  +    EA K+ D M      P++ T++ L+N 
Sbjct: 106 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 165

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
            C   RL EA ++ + M    C P++ TYN L+KG C   RVEE  E+   +   GL  +
Sbjct: 166 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 225

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
             TY  ++ G  + G  + A E+  E +  GV PN++T+NTL +G CK G   K + + +
Sbjct: 226 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 285

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            +++    P   +Y+ ++ G+ K GK+     +F  +   G + D    N+++ G C K 
Sbjct: 286 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 345

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT-LGKGKKTDEA-LIHLHHAIEMGHI 402
            +     E+A  +F++M +  ++ + G Y  +IR  L  G +   A LI    +      
Sbjct: 346 SK-----EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 400

Query: 403 PRTITFNNVIQALCGEGKIDKALL 426
             TI    ++  +  +G++DK+ L
Sbjct: 401 ASTI---GLVTNMLHDGRLDKSFL 421



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 1/299 (0%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
           ++ AS   ++ ++ K NP        +D  +K   L E   ++D + K   + S+  ++ 
Sbjct: 102 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 161

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+    M +  + A + F    S    P+  T++ +I+ +C      E  +V   M   G
Sbjct: 162 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 221

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
              N  T+ IL+  L ++G    A E+  +M   G  PNI TYN LL GLC  G++E+A 
Sbjct: 222 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 281

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   ++   ++P +YTY  +++G CK G+  +  +L      +GV P+VV +NT+ +G+
Sbjct: 282 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 341

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           C++G+  +   L K MK+   LP+   Y+TL+   L+ G    +  + KEM   GF  D
Sbjct: 342 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 400



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 145/285 (50%), Gaps = 8/285 (2%)

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           + ++D+M   GC+P++ TY  ++ GLC  G  + A+ +L  ++   L+P V  Y  ++DG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK    ++A+ L  E   +G+ PNVVT+++L +  C  G       LL  M +R   PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
             ++S L++  +K GK+  A  ++ EMV+   +      +SL+ G CM      D L++A
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM-----HDRLDEA 175

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            Q+FE M  K    D  TY  +I+   K K+ +E +       + G +  T+T+N +IQ 
Sbjct: 176 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 235

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKS 456
           L   G  D A  +   M      P+  +Y+ L+  L    +LEK+
Sbjct: 236 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 280


>gi|242090439|ref|XP_002441052.1| hypothetical protein SORBIDRAFT_09g019485 [Sorghum bicolor]
 gi|241946337|gb|EES19482.1| hypothetical protein SORBIDRAFT_09g019485 [Sorghum bicolor]
          Length = 548

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 176/349 (50%), Gaps = 9/349 (2%)

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCY-CNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
            A+   +  ++ G+ P++   ++++  Y C  + F  A +V+  M  NG  P+V T++ L
Sbjct: 115 AALAVLNAMAADGVVPDTAACTVLVGVYACRLHWFDAAYEVVRWMAANGVAPDVVTYSTL 174

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ LC +GR+ EAL VLD M   GC+PN  TY  +L   C  G + EA ++L  +   G 
Sbjct: 175 ISGLCSAGRVAEALGVLDLMLEEGCQPNAHTYTPILHAYCTSGMIHEAKDLLETMVAAGF 234

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P   TY  +++  CK     E  +LL E+  +G TP+ +T++T  +G CK G   K + 
Sbjct: 235 APSTATYNVLVEALCKACAFEEVDKLLEESSAKGWTPDTITYSTYMDGLCKNGRVDKSLA 294

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L+  M      P++I+ + LL+G+ +      A  + +     G+ V+    N+++R LC
Sbjct: 295 LVDKMLSVGLRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYNTVMRRLC 354

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
               +E+  L    ++F  M KK    +  T+ IVI +L K  K  EAL  L        
Sbjct: 355 ----DERRWLA-VVKLFVDMVKKGIAPNSWTFSIVIHSLCKLGKLHEALCLLG---SEEF 406

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +   +T+N +I+ L   GK  +A LLL  M E    P+  +Y +LI  L
Sbjct: 407 VANVVTYNTLIRHLNFLGKSCEAYLLLHEMIEKGIAPNDITYSLLIDCL 455



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 180/375 (48%), Gaps = 10/375 (2%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           L+  + A +     ++ G+AP+  T+S +I   C+     EA  V+D M + G  PN  T
Sbjct: 146 LHWFDAAYEVVRWMAANGVAPDVVTYSTLISGLCSAGRVAEALGVLDLMLEEGCQPNAHT 205

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           +T ++++ C SG + EA ++L+ M   G  P+  TYN L++ LC     EE  ++L    
Sbjct: 206 YTPILHAYCTSGMIHEAKDLLETMVAAGFAPSTATYNVLVEALCKACAFEEVDKLLEESS 265

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G  PD  TY+  MDG CK GR ++++ L+++ +  G+ PN +T N L +G C+  T  
Sbjct: 266 AKGWTPDTITYSTYMDGLCKNGRVDKSLALVDKMLSVGLRPNEITLNILLDGVCRRSTAW 325

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
               LL+   +     + ++Y+T++  L    +    V +F +MV+ G   +    + ++
Sbjct: 326 AAKCLLECSAEIGWHVNVVNYNTVMRRLCDERRWLAVVKLFVDMVKKGIAPNSWTFSIVI 385

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
             LC         L   ++    +  +  V +  TY  +IR L    K+ EA + LH  I
Sbjct: 386 HSLCK--------LGKLHEALCLLGSEEFVANVVTYNTLIRHLNFLGKSCEAYLLLHEMI 437

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
           E G  P  IT++ +I  LC EGK   AL  L    E     S+ +   ++  L    K  
Sbjct: 438 EKGIAPNDITYSLLIDCLCKEGKFLVALSCLNQCIEGGL--SKAAVSSILRGLIAGGKLR 495

Query: 458 DACALYGAALKQGVI 472
           +  AL G  L QG I
Sbjct: 496 ELQALIGWILGQGFI 510



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 128/254 (50%), Gaps = 11/254 (4%)

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
           S GL PN  T +I++   C ++  + A+ +++C  + G+H NV  +  ++  LC   R  
Sbjct: 301 SVGLRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYNTVMRRLCDERRWL 360

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
             +++   M + G  PN  T++ ++  LC +G++ EA  +L    ++    +V TY  ++
Sbjct: 361 AVVKLFVDMVKKGIAPNSWTFSIVIHSLCKLGKLHEALCLL---GSEEFVANVVTYNTLI 417

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                +G+S EA  LL+E IE+G+ PN +T++ L +  CKEG  +  +  L       C+
Sbjct: 418 RHLNFLGKSCEAYLLLHEMIEKGIAPNDITYSLLIDCLCKEGKFLVALSCLN-----QCI 472

Query: 293 P---DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
                K + S++L GL+  GK+R   ++   ++  GF +D  M   L+   C K +    
Sbjct: 473 EGGLSKAAVSSILRGLIAGGKLRELQALIGWILGQGFIIDVYMYQELIISFCKKGYCRGL 532

Query: 350 LLEDAYQVFEKMTK 363
            +     + E+M +
Sbjct: 533 EMYIMCHILERMIR 546



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 133/275 (48%), Gaps = 5/275 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E  D+ +++   G   S + +N L+ AL      E   K   E+S+ G  P++ T+S 
Sbjct: 219 IHEAKDLLETMVAAGFAPSTATYNVLVEALCKACAFEEVDKLLEESSAKGWTPDTITYST 278

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +   C      ++  ++D M   G  PN  T  IL++ +C+      A  +L+    IG
Sbjct: 279 YMDGLCKNGRVDKSLALVDKMLSVGLRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIG 338

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              N+  YN +++ LC   R     ++ +++   G+ P+ +T++ V+   CK+G+ +EA+
Sbjct: 339 WHVNVVNYNTVMRRLCDERRWLAVVKLFVDMVKKGIAPNSWTFSIVIHSLCKLGKLHEAL 398

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL          NVVT+NTL       G   +   LL  M ++   P+ I+YS L++ L
Sbjct: 399 CLLG---SEEFVANVVTYNTLIRHLNFLGKSCEAYLLLHEMIEKGIAPNDITYSLLIDCL 455

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            K GK   A+S   + +  G    +  ++S+LRGL
Sbjct: 456 CKEGKFLVALSCLNQCIEGGL--SKAAVSSILRGL 488



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 138/309 (44%), Gaps = 9/309 (2%)

Query: 168 SGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           S   + AL +LD+M   +G +P+   +           +   A  +L  +  DG+ PD  
Sbjct: 74  SAGAERALHLLDEMRSLMGRRPDAACFTTAAAAFSSASQPGAALAVLNAMAADGVVPDTA 133

Query: 227 TYTAVMDGF-CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
             T ++  + C++   + A E++      GV P+VVT++TL +G C  G   + +G+L L
Sbjct: 134 ACTVLVGVYACRLHWFDAAYEVVRWMAANGVAPDVVTYSTLISGLCSAGRVAEALGVLDL 193

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-S 344
           M +  C P+  +Y+ +L+     G I  A  + + MV  GF       N L+  LC   +
Sbjct: 194 MLEEGCQPNAHTYTPILHAYCTSGMIHEAKDLLETMVAAGFAPSTATYNVLVEALCKACA 253

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
           +EE D      ++ E+ + K    D  TY   +  L K  + D++L  +   + +G  P 
Sbjct: 254 FEEVD------KLLEESSAKGWTPDTITYSTYMDGLCKNGRVDKSLALVDKMLSVGLRPN 307

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            IT N ++  +C       A  LL    E     +  +Y+ ++ +L    +      L+ 
Sbjct: 308 EITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYNTVMRRLCDERRWLAVVKLFV 367

Query: 465 AALKQGVIP 473
             +K+G+ P
Sbjct: 368 DMVKKGIAP 376


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 194/403 (48%), Gaps = 6/403 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D+F  +   G       +   ++A V L + + A++ F       + PN + ++++I  
Sbjct: 51  LDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGG 110

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C +    +A K+   M      PN  TF  L++  CK+G +  A+ + ++M +   +P+
Sbjct: 111 LCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPS 170

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR-SNEAMELL 248
           I T+N LL GLC   R+EEA  ML  +K +G  PD +TY+ + DG  K    +  A++L 
Sbjct: 171 IITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLY 230

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
            EAI +GV  +  T + L NG CKEG   K   +LK + +   +P ++ Y+T++NG  + 
Sbjct: 231 REAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQI 290

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G +  A+   ++M   G   +    NS++   C     E  +++ A +  +KM  K    
Sbjct: 291 GDMDRAILTIEQMESRGLRPNCIAFNSVIDKFC-----EMQMIDKAEEWVKKMVGKGIAP 345

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
              TY I+I   G+          L    E G  P  I++ ++I  LC +GKI +A ++L
Sbjct: 346 SVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVL 405

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
             M     +P+   Y+MLI     + K  +A   +    K G+
Sbjct: 406 RDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGI 448



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 176/374 (47%), Gaps = 45/374 (12%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN ++     +   + A ++  +    G+AP+  T++I+I  Y     F    ++++ M 
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEME 374

Query: 148 DNGYHPNVTTFTILVNSLCKS-----------------------------------GRLK 172
           +NG  PNV ++  L+N LCK                                    G+L+
Sbjct: 375 ENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLR 434

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           EAL   D+M + G    I TYN L+KGLC +G+++EA EM   + + G  PDV TY +++
Sbjct: 435 EALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLI 494

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
            G+   G S + +EL     + G+ P + TF+ L +G  KEG  +K   L   M + N  
Sbjct: 495 SGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKET-LFNEMLQMNLS 553

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDL 350
           PD++ Y+ +++   + G ++ A S+ KEMV  G   D +  NSL+ G     K  E KDL
Sbjct: 554 PDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDL 613

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           ++D       M  K  + +  TY ++I+     K  + A +     +E G +P     N 
Sbjct: 614 VDD-------MKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNE 666

Query: 411 VIQALCGEGKIDKA 424
           +   L  +G++ +A
Sbjct: 667 LSTGLRKDGRLQEA 680



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 197/417 (47%), Gaps = 12/417 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   LK  +++F+++K+     +V  +N L+  L        A K F E S   L PN 
Sbjct: 77  VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TF+ +I  YC   +   A  + + M      P++ TF  L++ LCK+ R++EA  +L++
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGR-VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +   G  P+  TY+ +  GL         A ++       G+K D YT + +++G CK G
Sbjct: 197 IKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEG 256

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           +  +A E+L   +E G+ P  V +NT+ NGYC+ G   + +  ++ M+ R   P+ I+++
Sbjct: 257 KVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFN 316

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG---LCMKSWEEKDLLEDAYQ 356
           ++++   +   I  A    K+MV  G        N L+ G   LC+ S          +Q
Sbjct: 317 SVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR--------CFQ 368

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           + E+M +     +  +YG +I  L K  K  EA + L   +  G +P    +N +I   C
Sbjct: 369 ILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSC 428

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             GK+ +AL     M ++    +  +Y+ LI  L ++ K  +A  ++      G  P
Sbjct: 429 TVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCP 485



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 173/374 (46%), Gaps = 6/374 (1%)

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
            A+  + EA   G+  +++T SI++   C +    +A +V+  + ++G  P    +  +V
Sbjct: 225 AALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIV 284

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
           N  C+ G +  A+  ++QM   G +PN   +N ++   C +  +++A E +  +   G+ 
Sbjct: 285 NGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIA 344

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P V TY  ++DG+ ++   +   ++L E  E G  PNV+++ +L N  CK+G  ++   +
Sbjct: 345 PSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMV 404

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L+ M  R  LP+   Y+ L++G    GK+R A+  F EM + G        NSL++GLC 
Sbjct: 405 LRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCK 464

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
                   L++A ++F  +T      D  TY  +I        + + L       ++G  
Sbjct: 465 MGK-----LKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLK 519

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P   TF+ +I     EG I     L   M +    P R  Y+ +I    +      A +L
Sbjct: 520 PTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSL 578

Query: 463 YGAALKQGVIPQRK 476
               +  GV P  K
Sbjct: 579 QKEMVDMGVRPDNK 592



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 175/386 (45%), Gaps = 6/386 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N ++     + + + A+    +  S GL PN   F+ +I  +C      +A + +  M 
Sbjct: 280 YNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMV 339

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V T+ IL++   +        ++L++M   G KPN+ +Y  L+  LC  G++ 
Sbjct: 340 GKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKIL 399

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  +L ++   G+ P+   Y  ++DG C VG+  EA+   +E  + G+   +VT+N+L 
Sbjct: 400 EAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLI 459

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G CK G   +   +  L+      PD I+Y++L++G    G  +  + +++ M + G +
Sbjct: 460 KGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLK 519

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                 + L+ G   +  + K+ L      F +M +     D   Y  +I    +     
Sbjct: 520 PTINTFHPLISGCSKEGIKLKETL------FNEMLQMNLSPDRVVYNAMIHCYQETGHVQ 573

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A       ++MG  P   T+N++I     EGK+ +   L+  M     IP   +Y +LI
Sbjct: 574 KAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLI 633

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
                L+    A   Y   L+ G +P
Sbjct: 634 QGHCDLKDFNGAYVWYREMLENGFLP 659



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 163/336 (48%), Gaps = 4/336 (1%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +  ++ D M   G  P+     ++V SL +S +    L++  +M  +G +P+   Y   +
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
                +G ++ A E+   +K   + P+V+ Y  ++ G CK  R  +A +L  E   R + 
Sbjct: 74  LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PN VTFNTL +GYCK G     +GL + MKK    P  I++++LL+GL K  +I  A  +
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             E+   GF  D    + +  GL +KS +      D Y+  E + K V + D  T  I++
Sbjct: 194 LNEIKCNGFVPDGFTYSIIFDGL-LKSDDGAGAALDLYR--EAIGKGVKI-DNYTCSILL 249

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L K  K ++A   L   +E G +P  + +N ++   C  G +D+A+L +  M      
Sbjct: 250 NGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLR 309

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P+  +++ +I K  +++    A       + +G+ P
Sbjct: 310 PNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAP 345



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 131/263 (49%), Gaps = 3/263 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E +  FD + K+G   ++  +N L+  L  + + + A + F   +S G  P+  T++ 
Sbjct: 433 LREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNS 492

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG-RLKEALEVLDQMGRI 184
           +I  Y N  +  +  ++ + M   G  P + TF  L++   K G +LKE L   ++M ++
Sbjct: 493 LISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETL--FNEMLQM 550

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
              P+   YN ++      G V++A+ +   + + G++PD  TY +++ G  K G+ +E 
Sbjct: 551 NLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSET 610

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            +L+++   +G+ P   T++ L  G+C            + M +   LP+    + L  G
Sbjct: 611 KDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTG 670

Query: 305 LLKWGKIRPAVSIFKEMVRFGFE 327
           L K G+++ A SI  EM+  G +
Sbjct: 671 LRKDGRLQEAQSICSEMIANGMD 693


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 191/426 (44%), Gaps = 6/426 (1%)

Query: 49  PRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D  IK   L+    + D +   G   +   +N LL  L            
Sbjct: 48  PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSAL 107

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E +S  + P+ +T+SI+        D      +      NG      T +IL+N LCK
Sbjct: 108 LDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCK 167

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G++  A EVL  +   G  P    YN L+ G C  G +E A+     +K+  +KPD  T
Sbjct: 168 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 227

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y A+++G CK  R   A +LL E  + GV P V TFNTL + Y + G   K   +L  M+
Sbjct: 228 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 287

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +    P+ +SY +++N   K GKI  AV+I  +M       + ++ N+++      ++ E
Sbjct: 288 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII-----DAYVE 342

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
               + A+ + EKM          TY ++I+ L    +  EA   ++       IP  ++
Sbjct: 343 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 402

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I A C  G IDKAL L   M+++    +  +Y  LI+ L    +  +   LY   +
Sbjct: 403 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 462

Query: 468 KQGVIP 473
           +  V+P
Sbjct: 463 QNNVVP 468



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 161/347 (46%), Gaps = 5/347 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           AV+ F E +   + PN  T++ MI  +    D     ++ D M  +G  PN  T+ +L++
Sbjct: 34  AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 93

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LC++GR+ E   +LD+M      P+  TY+ L  GL   G  +    +      +G+  
Sbjct: 94  GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 153

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
             YT + +++G CK G+ + A E+L   +  G+ P  V +NTL NGYC+ G         
Sbjct: 154 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 213

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             MK R+  PD I+Y+ L+NGL K  +I  A  +  EM   G        N+L+      
Sbjct: 214 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI-----D 268

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           ++     LE  + V  +M +     +  +YG ++    K  K  EA+  L        +P
Sbjct: 269 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 328

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
               +N +I A    G  D+A +L+  M  +   PS  +Y++LI  L
Sbjct: 329 NAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 375



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 162/330 (49%), Gaps = 5/330 (1%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN+++++++I          +A +V D M +    PN  T+  +++   K G L+    +
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
            DQM   G KPN  TYN LL GLC  GR+ E   +L  + +  + PD +TY+ + DG  +
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G S   + L  + ++ GVT    T + L NG CK+G       +L+ +     +P ++ 
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           Y+TL+NG  + G++  A S F +M     + D    N+L+ GLC     + + + +A  +
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC-----KAERITNAQDL 247

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
             +M          T+  +I   G+  + ++  I L    E G  P  +++ +++ A C 
Sbjct: 248 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 307

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            GKI +A+ +L  M+    +P+   Y+ +I
Sbjct: 308 NGKIPEAVAILDDMFHKDVLPNAQVYNAII 337



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 177/370 (47%), Gaps = 12/370 (3%)

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
           DG  +S+     L   L    + +  +  F +    G+    +T SI++   C       
Sbjct: 119 DGFTYSI-----LFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSI 173

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A +V+  + + G  P    +  L+N  C++G L+ A     QM     KP+  TYN L+ 
Sbjct: 174 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 233

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC   R+  A ++LM ++++G+ P V T+  ++D + + G+  +   +L+E  E G+ P
Sbjct: 234 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 293

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           NVV++ ++ N +CK G   + V +L  M  ++ LP+   Y+ +++  ++ G    A  + 
Sbjct: 294 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 353

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           ++M   G        N L++GLC +S      + +A ++   ++    + D  +Y  +I 
Sbjct: 354 EKMKSNGISPSIVTYNLLIKGLCNQSQ-----ISEAEEIINSLSNHRLIPDAVSYNTLIS 408

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
                   D+AL  L   +    I  T+ T++ +I  L G G++++   L   M ++  +
Sbjct: 409 ACCYRGNIDKAL-DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 467

Query: 438 PSRTSYDMLI 447
           PS   +++++
Sbjct: 468 PSNAIHNIMV 477



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 149/324 (45%), Gaps = 5/324 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           PN  ++ +++  + ++GR  +A+EV D+M      PN  TYN ++ G    G +E  + +
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   GLKP+  TY  ++ G C+ GR  E   LL+E   + + P+  T++ LF+G  +
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     + L     K        + S LLNGL K GK+  A  + + +V  G      +
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N+L+ G C         LE A+  F +M  +    D  TY  +I  L K ++   A   
Sbjct: 193 YNTLINGYCQTGE-----LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 247

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L    + G  P   TFN +I A    G+++K  ++L  M E+   P+  SY  ++    +
Sbjct: 248 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 307

Query: 453 LEKSYDACALYGAALKQGVIPQRK 476
             K  +A A+      + V+P  +
Sbjct: 308 NGKIPEAVAILDDMFHKDVLPNAQ 331



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 145/295 (49%), Gaps = 5/295 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+       E E A   F +  S  + P+  T++ +I   C       A+ ++  M 
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           DNG +P V TF  L+++  ++G+L++   VL +M   G KPN+ +Y  ++   C  G++ 
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  +L ++ +  + P+   Y A++D + + G +++A  L+ +    G++P++VT+N L 
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G C +    +   ++  +     +PD +SY+TL++     G I  A+ + + M ++G +
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 432

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
              R  + L+ GL          L +   +++KM +   V     + I++    K
Sbjct: 433 STVRTYHQLISGLGGAGR-----LNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 482



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 125/262 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +    D+   ++ +G N +V  FN L+ A     + E      SE    GL PN  
Sbjct: 237 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 296

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++  ++  +C      EA  ++D MF     PN   +  ++++  + G   +A  ++++M
Sbjct: 297 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 356

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+I TYN L+KGLC   ++ EA E++ ++ N  L PD  +Y  ++   C  G  
Sbjct: 357 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 416

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A++L     + G+   V T++ L +G    G   +   L + M + N +P    ++ +
Sbjct: 417 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM 476

Query: 302 LNGLLKWGKIRPAVSIFKEMVR 323
           +    K+G    A  + KEM++
Sbjct: 477 VEAYSKYGNEIKAEDLRKEMLQ 498


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 200/415 (48%), Gaps = 11/415 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  +    +++     +V  +N L+   V L +   A K  +  S  G+  NS 
Sbjct: 268 KEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSR 327

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I+ YC +    +A K+I CM +     +   + +L+++ C +GR+ +AL + D M
Sbjct: 328 TYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAM 387

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            ++G K N    N L+ G C +G V +A E+L+++K+  LKPD Y Y  ++DGFCK    
Sbjct: 388 LKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDF 447

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A +L +E   +GV   VVT+NTL       G     + +  LM KR   P++++Y TL
Sbjct: 448 IKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTL 507

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+   K G    A+ I+K+ +  GF     + N+++ G C     + + L  A ++F KM
Sbjct: 508 LDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFC-----KMEKLVQAQEIFLKM 562

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +     D  TY  +I    K     EAL     +   G    T  +N++I  +    ++
Sbjct: 563 KELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEEL 622

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKSYDACALYGAALKQGVIP 473
            K   LL  M      P+  +Y  LI        ++K+Y+A   Y   + +G+ P
Sbjct: 623 QKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNA---YFKMIDKGIAP 674



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 179/400 (44%), Gaps = 5/400 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD++ K G   S+   N LL  LV   E   A+  + +  + G+ P+ ++++IM+  YC
Sbjct: 208 VFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYC 267

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    EA   +  M  +   PNV T+  L++     G +  A +VL  M   G   N +
Sbjct: 268 KEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSR 327

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+KG C  G++E+A +++  +    L  D + Y  ++  +C  GR ++A+ + +  
Sbjct: 328 TYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAM 387

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           ++ G+  N V  N+L NGYCK G   K   +L  MK  N  PD   Y+TLL+G  K    
Sbjct: 388 LKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDF 447

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +  EM   G        N+LL+ L          +E A  ++  M K+    +  
Sbjct: 448 IKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGH-----VEHALHIWNLMHKRGVAPNEV 502

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  ++    K    D A++    A+  G       +N +I   C   K+ +A  +   M
Sbjct: 503 TYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKM 562

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
            E    P   +Y  LI    ++    +A  L   + + G+
Sbjct: 563 KELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGI 602



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 200/467 (42%), Gaps = 18/467 (3%)

Query: 11  IFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKER 69
           +  N+    + K+   NK    AA  L + +  +LK  P S      +D   K     + 
Sbjct: 397 VICNSLINGYCKLGHVNK----AAEVLVSMKDWNLK--PDSYGYNTLLDGFCKQEDFIKA 450

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
             + D +   G N++V  +N LL  L  +   E A+  ++     G+APN  T+  ++  
Sbjct: 451 FKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDA 510

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +     F  A  +       G+  ++T +  ++   CK  +L +A E+  +M  +G  P+
Sbjct: 511 FFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPD 570

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-- 247
             TY  L+ G C VG + EA ++    + DG+      Y +++ G   V RS E  +L  
Sbjct: 571 EITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITG---VFRSEELQKLNG 627

Query: 248 -LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
            L E   R ++PNVVT+ +L  G+C +G   K       M  +   P+ I  S +++ L 
Sbjct: 628 LLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLY 687

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           + GKI  A  I  ++      +     +  L    ++  E + +++     F K    + 
Sbjct: 688 RHGKIDEANLILHQIADID-PIAAHAHSVELPKSDLRHLETQKIVDS----FGKKAMSIP 742

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
           +++   Y I I  L K K  D+    L   +  G  P   T+ ++I A    GK+++A  
Sbjct: 743 ISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFC 802

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L   M     +P+   Y+ LI  L +      A  L+    ++G+ P
Sbjct: 803 LRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSP 849



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 156/360 (43%), Gaps = 42/360 (11%)

Query: 49  PRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +  +  +D   K   L E + + D  ++DG + S   +N L+  +    E +     
Sbjct: 569 PDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGL 628

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            +E  +  L+PN  T+  +I  +C+K    +A      M D G  PN+   + +V+SL +
Sbjct: 629 LAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYR 688

Query: 168 SGRLKEALEVLDQMGRI-----------------------------GCKP------NIQT 192
            G++ EA  +L Q+  I                             G K       N   
Sbjct: 689 HGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIV 748

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN  + GLC    +++   +L ++   G  PD YTY +++     VG+ NEA  L ++ I
Sbjct: 749 YNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMI 808

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
             G+ PN+V +N L NG CK G   +   L   + ++   P  ++Y+TL++G  K G+  
Sbjct: 809 NAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTT 868

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
            A+ +  +M   G        ++L+ GL M  KS +   LL +      K  K  SV DP
Sbjct: 869 EALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNE----MMKAGKGSSVMDP 924



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 172/399 (43%), Gaps = 43/399 (10%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D++ K G   S++ +N ++     + +   A + F +    G  P+  T+  +I  YC  
Sbjct: 526 DALSK-GFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKV 584

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
            +  EA K+ D    +G   +   +  L+  + +S  L++   +L +M      PN+ TY
Sbjct: 585 GNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTY 644

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE--- 250
             L+ G C  G +++AY     + + G+ P++   + ++    + G+ +EA  +L++   
Sbjct: 645 GSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD 704

Query: 251 ---------------------------------AIERGVTPNVVTFNTLFNGYCKEGTPM 277
                                            A+   ++ N+V +N    G CK     
Sbjct: 705 IDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIV-YNIAITGLCKSKNID 763

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
               +L  +  +   PD  +Y +L++     GK+  A  +  +M+  G   +  + N+L+
Sbjct: 764 DVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALI 823

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            GLC KS      L+ A ++F K+ +K       TY  +I    KG +T EAL       
Sbjct: 824 NGLC-KSGN----LDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMR 878

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           E G  P +IT++ +I  L  EGK ++++ LL  M +  K
Sbjct: 879 EEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGK 917



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 24/250 (9%)

Query: 20  HNKIPQFNKLVVFAAASL----STAESLDL-KENPRSLQAQRFVDRIKASPLKERIDIFD 74
           H KI + N L++   A +    + A S++L K + R L+ Q+ VD               
Sbjct: 689 HGKIDEAN-LILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVD--------------- 732

Query: 75  SIKKDGTNWSVSD---FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           S  K   +  +S+   +N  +  L      +   +  S+    G  P+++T+  +I    
Sbjct: 733 SFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACS 792

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA  + D M + G  PN+  +  L+N LCKSG L  A  + +++ R G  P + 
Sbjct: 793 AVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVV 852

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G C  GR  EA E+   ++ +G+ P   TY+ ++ G    G+S +++ LLNE 
Sbjct: 853 TYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEM 912

Query: 252 IERGVTPNVV 261
           ++ G   +V+
Sbjct: 913 MKAGKGSSVM 922


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 183/387 (47%), Gaps = 15/387 (3%)

Query: 88  FNDLLMALV---MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
            N LLMAL    M  + E+        +S   A N  T++ +I  YC   D   A++ + 
Sbjct: 44  LNTLLMALARHRMFPDMESL-------ASRMPARNLRTYTTLINAYCLAGDIPAAKQHLT 96

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   G  P+   +T  V   C++G L  A  V   M   GC     TY  LL GL   G
Sbjct: 97  SLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAG 156

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            V EA  + + ++ D   PD + Y  ++ G C+ GR+ EA  LL EA+  G  PN+V +N
Sbjct: 157 MVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYN 216

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +GYC  G     + + + M    C P+  +Y+ L++GL K GK+  A+ +F  MV  
Sbjct: 217 ALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA 276

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G E +     +L++G C +       L+ A+++   M     V +  T+ ++I  L K +
Sbjct: 277 GLEPNVVTYTALIQGQCNEGH-----LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKRE 331

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           K +EA + L   ++ G     + + ++I  LC  GKID A  L+  M     +P   SY 
Sbjct: 332 KVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYS 391

Query: 445 MLITKLDQLEKSYDACALYGAALKQGV 471
            LI  L + +K   A  +    +++G+
Sbjct: 392 SLIDGLCRQKKLSQATLMLEDMMEKGI 418



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 186/400 (46%), Gaps = 6/400 (1%)

Query: 49  PRSLQAQRFV-DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S     FV    +A  L     +F  +   G   +   +  LL  L+       A+  
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAV 164

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F    +   AP++  ++ M+   C      EA  +++    NG+ PN+  +  L++  C 
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCN 224

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G ++ AL+V + M    C PN++TY  L+ GLC  G+VE A  +   +   GL+P+V T
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           YTA++ G C  G    A  LL+     G+ PN  TF+ L +  CK     +    L  + 
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           K+    +++ Y++L++GL K GKI  A  + ++M+  GF  D    +SL+ GLC      
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC-----R 399

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           +  L  A  + E M +K     P TY I+I  L +   ++         I  G  P  +T
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +   +++ C EG+++ A  ++  M +    P+  +Y+ LI
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 188/387 (48%), Gaps = 5/387 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           + A  ++E + +F  ++ D        +  ++  L      E A     EA S G  PN 
Sbjct: 153 LGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNI 212

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             ++ +I  YCN  +   A KV + M  N   PNV T+T L++ LCKSG+++ A+ +  +
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G +PN+ TY  L++G C  G ++ A+ +L  ++ +GL P+ +T++ ++D  CK  +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA   L   +++GV  N V + +L +G CK G       L++ M     +PD  SYS+
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL +  K+  A  + ++M+  G +        ++  L  +        E   ++F+K
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS-----EGPKKIFDK 447

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M       D  TY + +R+  +  + ++A   +   ++ G  P  +T+N +I+     G 
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
           + +A     +M      P+  SY +L+
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLL 534



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 186/398 (46%), Gaps = 11/398 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  ++  + +F  + + G   +V  +  L+         + A +      + GL PN W
Sbjct: 259 KSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS++I   C +    EA+  +  +   G   N   +T L++ LCK+G++  A E++ +M
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  +Y+ L+ GLC   ++ +A  ML ++   G++    TYT ++D   +   S
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
               ++ ++ I  G+ P++VT+      YC+EG       ++  M  R   P+ ++Y+TL
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS--------WEEKDLLED 353
           + G    G +  A S F+ MV  G++ +E     LLR +  KS        W+  D ++D
Sbjct: 499 IRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIAD-MKD 557

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVI 412
              + E +T++        Y   IR L +  + +EA  H    ++  ++ P    + ++I
Sbjct: 558 LQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAK-HFFMGMQNANLTPSEDVYTSII 616

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              C    +  AL LL  M +   +P   SY ++I+ L
Sbjct: 617 DCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSL 654



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 199/424 (46%), Gaps = 17/424 (4%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  ++  + +F+ +  +  + +V  + +L+  L    + E A+  FS     GL PN  T
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I+  CN+     A +++  M  NG  PN  TF++L+++LCK  +++EA   L  + 
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           + G K N   Y  L+ GLC  G+++ A E++  + ++G  PD ++Y++++DG C+  + +
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLS 404

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +A  +L + +E+G+  + VT+  + +   +E        +   M      PD ++Y+  +
Sbjct: 405 QATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFV 464

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
               + G++  A S+  +MV  G   +    N+L+RG     +    L+  A+  FE M 
Sbjct: 465 RSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG-----YANLGLVSQAFSTFEVMV 519

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEA-----------LIHLHHAIEMGHIPRTI-TFNN 410
            K    +  +Y +++R + K   +D +           L  L   I    +P     ++ 
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSC 579

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
            I+ LC   ++++A      M      PS   Y  +I    +L+   DA  L  +  K G
Sbjct: 580 FIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSG 639

Query: 471 VIPQ 474
            +P 
Sbjct: 640 YLPH 643



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 134/324 (41%), Gaps = 54/324 (16%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L +   + + + + G   S   +  ++  LV     E   K F +  + G+ P+  T+++
Sbjct: 403 LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTV 462

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +R YC +    +A  +I  M D G  PN+ T+  L+      G + +A    + M   G
Sbjct: 463 FVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKG 522

Query: 186 CKPN-----------------------------------------------IQTYNCLLK 198
            KPN                                                  Y+C ++
Sbjct: 523 WKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIR 582

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
            LC V R+EEA    M ++N  L P    YT+++D  C++    +A+ LL+   + G  P
Sbjct: 583 CLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLP 642

Query: 259 NVVTFNTLFNGYCKEG---TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           ++ ++  + +  C+ G   T  +  G L L+K+ N   D+I +  L+ GLL+ G +    
Sbjct: 643 HLESYRIIISSLCEGGNFRTAKEVFGDL-LLKESNY--DEIVWKILIYGLLQKGSVAEFS 699

Query: 316 SIFKEMVRFGFEVDERMMNSLLRG 339
           S+   M   G++     +N+++ G
Sbjct: 700 SLLSVMKEHGYQ-PSNTINAMITG 722



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 3/190 (1%)

Query: 58  VDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA 117
           VD  K + +K+   + + I +     +   ++  +  L  ++  E A  FF    +  L 
Sbjct: 547 VDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLT 606

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+   ++ +I C C      +A  ++D M  +GY P++ ++ I+++SLC+ G  + A EV
Sbjct: 607 PSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEV 666

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
              +       +   +  L+ GL   G V E   +L  +K  G +P   T  A++ G  +
Sbjct: 667 FGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS-NTINAMITG--E 723

Query: 238 VGRSNEAMEL 247
           +  +NE  E+
Sbjct: 724 ITVTNEVQEI 733


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 170/340 (50%), Gaps = 10/340 (2%)

Query: 89  NDLLMA-----LVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           ND LM      L    + E A + + +    GL  N  T + +I   C  N+  EA KV+
Sbjct: 421 NDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVL 480

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M ++G   +  T+ I++   CK+ ++ EA+++ D M + G KP++ T+N  L   C +
Sbjct: 481 KAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNL 540

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G+VEE   +L  +K++GLKPD+ TY  ++DG+CK    ++A E L E ++ G+ PN V +
Sbjct: 541 GKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIY 600

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N L  GY + G     +G+L  MK     P  ++Y++L+  +   G +    ++F + + 
Sbjct: 601 NALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIV 660

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
              E+       +++G C     +   +++A   F++M  +    +  TY  ++    K 
Sbjct: 661 KDIELGVIGYTIIIQGFC-----KIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKS 715

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
              +EA       + +G +P ++++N +I   C    +DK
Sbjct: 716 GNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDK 755



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 186/411 (45%), Gaps = 14/411 (3%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + +FD +   G   +V  +N +  AL    E E A K   E    G+  +   F+ ++
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393

Query: 128 RCYCNKNDFFE-ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
             +       +   ++I  M      PN    T  +  LCKSG+ +EA E+  Q+   G 
Sbjct: 394 AWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGL 453

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
             N+ T N L+ GLC    ++EA ++L  + N G++ D  TY  ++ G CK  + +EA++
Sbjct: 454 GVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQ 513

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L ++ I+RG  P++ TFN   + YC  G   + + LL  MK     PD ++Y T+++G  
Sbjct: 514 LRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYC 573

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K   +  A     E+++ G   +  + N+L+ G     +     + DA  + + M     
Sbjct: 574 KAKDMHKANEYLTELMKNGLRPNAVIYNALIGG-----YGRNGNISDAIGILDTMKYNGI 628

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAI----EMGHIPRTITFNNVIQALCGEGKID 422
              P TY  ++  +      +E        I    E+G I  TI    +IQ  C  GKID
Sbjct: 629 QPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTI----IIQGFCKIGKID 684

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +A++    M+     P++ +Y  L+    +     +A  L+   +  G++P
Sbjct: 685 EAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVP 735



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 196/422 (46%), Gaps = 25/422 (5%)

Query: 53  QAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEAS 112
            A++ +D +  + +     +F+S+      W +     L + L ++  +E   +F     
Sbjct: 369 HAEKILDEMLLAGMMVHCSLFNSV----VAWHLRGTGRLDLVLRLI--REMLARF----- 417

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
              L PN    +  I+  C      EA ++   +   G   NV T   L++ LC+   +K
Sbjct: 418 ---LKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMK 474

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           EA +VL  M   G + +  TYN +++G C   +++EA ++  ++   G KPD++T+   +
Sbjct: 475 EATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFL 534

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
             +C +G+  E + LL++    G+ P++VT+ T+ +GYCK     K    L  + K    
Sbjct: 535 HTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLR 594

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+ + Y+ L+ G  + G I  A+ I   M   G +      NSL+  +C        L+E
Sbjct: 595 PNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMC-----HAGLVE 649

Query: 353 DAYQVFEK-MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           +   VF + + K + +   G Y I+I+   K  K DEA+++       G  P  +T+  +
Sbjct: 650 EVKAVFAQCIVKDIELGVIG-YTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTL 708

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT---KLDQLEKSYDACA-LYGAAL 467
           + A    G  ++A  L   M     +P   SY+ LI+   ++D L+K  ++ A +    L
Sbjct: 709 MFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVL 768

Query: 468 KQ 469
           KQ
Sbjct: 769 KQ 770



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 137/293 (46%), Gaps = 1/293 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KAS + E I + D + K G    +  FN  L     L + E  +    +  S GL P+  
Sbjct: 504 KASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIV 563

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I  YC   D  +A + +  +  NG  PN   +  L+    ++G + +A+ +LD M
Sbjct: 564 TYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTM 623

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P   TYN L+  +C+ G VEE   +        ++  V  YT ++ GFCK+G+ 
Sbjct: 624 KYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKI 683

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA+    E   RG+ PN +T+ TL   Y K G   +   L   M     +PD +SY+TL
Sbjct: 684 DEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTL 743

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
           ++G  +   +   V    EM     + D    N+ + G+    W +K+ + +A
Sbjct: 744 ISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI-TTPWCQKEAVSNA 795



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 182/442 (41%), Gaps = 77/442 (17%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVTTFTILV 162
           A   F E S+ G +P+  T SI++           ARKV   M D     P+V T+T ++
Sbjct: 159 AADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMI 218

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM---------- 212
            +LC++G +  A  +L ++ R G +P + TYN L+  LC  GRVEEA+ +          
Sbjct: 219 KALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVR 278

Query: 213 -------------------------LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
                                    L  ++  G+ P+   Y  ++   C+ G  +EA++L
Sbjct: 279 PSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKL 338

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGT-----------------------------PMK 278
            +E + +G+   VVT+N +    CKEG                               ++
Sbjct: 339 FDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLR 398

Query: 279 GVGLLKL-------MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           G G L L       M  R   P+    +  +  L K GK   A  I+ +++  G  V+  
Sbjct: 399 GTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVA 458

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             N+L+ GLC     + + +++A +V + M       D  TY I+I+   K  K DEA+ 
Sbjct: 459 TSNALIHGLC-----QGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQ 513

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
                I+ G  P   TFN  +   C  GK+++ L LL  M      P   +Y  +I    
Sbjct: 514 LRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYC 573

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           + +  + A       +K G+ P
Sbjct: 574 KAKDMHKANEYLTELMKNGLRP 595



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 143/308 (46%), Gaps = 5/308 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE   +  ++   G       +N ++      ++ + A++   +    G  P+ +TF+I
Sbjct: 473 MKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNI 532

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +  YCN     E   ++D M   G  P++ T+  +++  CK+  + +A E L ++ + G
Sbjct: 533 FLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNG 592

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN   YN L+ G    G + +A  +L  +K +G++P   TY ++M   C  G   E  
Sbjct: 593 LRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVK 652

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            +  + I + +   V+ +  +  G+CK G   + V   K M  R   P+K++Y+TL+   
Sbjct: 653 AVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAY 712

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G    A  +F EMV  G   D    N+L+ G C     E D L+   +   +M+ +V
Sbjct: 713 SKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFC-----EVDSLDKMVESPAEMSSQV 767

Query: 366 SVTDPGTY 373
              D  +Y
Sbjct: 768 LKQDGCSY 775



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 102/422 (24%), Positives = 175/422 (41%), Gaps = 41/422 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  +     +   +++ G   +V  +N L+ AL      E A +         + P+  
Sbjct: 223 RAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIV 282

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF I+I        F E   V+  M   G  PN   +  ++   C+ G   EAL++ D+M
Sbjct: 283 TFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEM 342

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAY----EMLM----------------NVKNDG- 220
              G K  + TYN + K LC  G +E A     EML+                +++  G 
Sbjct: 343 VSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGR 402

Query: 221 ---------------LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
                          LKP+    TA +   CK G+  EA E+  + + +G+  NV T N 
Sbjct: 403 LDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNA 462

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G C+     +   +LK M       D+I+Y+ ++ G  K  K+  A+ +  +M++ G
Sbjct: 463 LIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG 522

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
           F+ D    N  L   C         +E+   + ++M  +    D  TYG +I    K K 
Sbjct: 523 FKPDLFTFNIFLHTYC-----NLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 577

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             +A  +L   ++ G  P  + +N +I      G I  A+ +L  M  +   P+  +Y+ 
Sbjct: 578 MHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNS 637

Query: 446 LI 447
           L+
Sbjct: 638 LM 639


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 183/393 (46%), Gaps = 45/393 (11%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+ DF  LL ++  +    T +   ++  S+G+ PN +T +I+I  +C+ N    A  V+
Sbjct: 44  SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVL 103

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             +   G+ P+ TTFT L+  LC  G++ EAL + D+M   G +PN+ TY  L+ GLC V
Sbjct: 104 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 163

Query: 204 G-----------------------------------RVEEAYEMLMNVKNDGLKPDVYTY 228
           G                                   +V EA+ +   +   G+ PD++TY
Sbjct: 164 GNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTY 223

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           T+++   C +        LLN+ +   + P+VV F+T+ +  CKEG   +   ++ +M +
Sbjct: 224 TSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ 283

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           R   PD ++Y+TL++G     ++  AV +F  MVR GF  D     +L+         +K
Sbjct: 284 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINA------GKK 337

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT--DEALIHLHHAIEMGHIPRTI 406
           D         +++   V  T     G  +  + K K    ++    L+  +    +P  +
Sbjct: 338 D--GGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVV 395

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
            F+ V+ ALC EGK+ +A  ++ +M +    P+
Sbjct: 396 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPN 428



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 144/296 (48%), Gaps = 7/296 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++  F  L+ S+ K       L +  QM   G  PN+ T N L+   C++ RV  A+ +
Sbjct: 43  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G +PD  T+T ++ G C  G+  EA+ L ++ I+ G  PNVVT+ TL NG CK
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G     + LL+ M++ NC PD + Y+++++ L K  ++  A ++F +MV  G   D   
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222

Query: 333 MNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             SL+  LC +  W+    L        +M     + D   +  V+  L K  K  EA  
Sbjct: 223 YTSLVHALCNLCEWKHVTTL------LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHE 276

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            +   I+ G  P  +T+  ++   C + ++D+A+ +  +M      P   SY  LI
Sbjct: 277 IVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 332



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 34/261 (13%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +  S+++      V  +  ++ +L    +   A   FS+    G++P+ +T++ ++  
Sbjct: 170 IRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHA 229

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            CN  ++     +++ M ++   P+V  F+ +V++LCK G++ EA E++D M + G +P+
Sbjct: 230 LCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPD 289

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT-------------------- 229
           + TY  L+ G C    ++EA ++   +   G  PDV +YT                    
Sbjct: 290 VVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVI 349

Query: 230 --------AVMDGFCKVGRSNE------AMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
                   AV  G  +V R ++         LLNE +   + PNVV F+T+ +  CKEG 
Sbjct: 350 GLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGK 409

Query: 276 PMKGVGLLKLMKKRNCLPDKI 296
            M+   ++ +M KR   P+ +
Sbjct: 410 VMEAHDVVDMMIKRGVEPNAV 430



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 35/240 (14%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  ++F  +   G +  +  +  L+ AL  L E +      ++  +  + P+  
Sbjct: 197 KDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVV 256

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            FS ++   C +    EA +++D M   G  P+V T+T L++  C    + EA++V D M
Sbjct: 257 IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 316

Query: 182 GRIGCKPNIQTYNCLLK-------GLCYVGRV---------------------------E 207
            R G  P++ +Y  L+        GL  +  V                           E
Sbjct: 317 VRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFE 376

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV-TFNTL 266
           +   +L  + N  + P+V  ++ V+D  CK G+  EA ++++  I+RGV PN V  F+T+
Sbjct: 377 KGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAVKVFDTM 436



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 7/233 (3%)

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A+   N  +     P++V F  L     K       + L   M      P+  + + L
Sbjct: 27  DDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL 86

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +N      ++  A S+  ++++ G + D     +L+RGLC++       + +A  +F+KM
Sbjct: 87  INSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK-----IGEALHLFDKM 141

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGK 420
             +    +  TYG +I  L K   T  A I L  ++E G+  P  + + ++I +LC + +
Sbjct: 142 IDEGFQPNVVTYGTLINGLCKVGNTSAA-IRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ 200

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + +A  L   M      P   +Y  L+  L  L +      L    +   ++P
Sbjct: 201 VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 253


>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
          Length = 414

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 186/363 (51%), Gaps = 8/363 (2%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID-CMFDN 149
           L+ +    N  + +    S+AS +G    ++ ++ ++     +    +   + +  + D 
Sbjct: 17  LVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDR 76

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
            Y P+V +F +++  +C+ G++++ALE++++M   GC P+  T+N L+ GLC    V   
Sbjct: 77  VYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRG 136

Query: 210 YEMLMNVKNDGL-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           +E+L  ++ DG+  P+V T+T+V+ G+CK G+  +AM + N+ +  G+ PN VT+N L N
Sbjct: 137 HEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLIN 196

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           GY K G     V + + M +  C PD +++S+L++G  + G++  A+ I+ +M +   + 
Sbjct: 197 GYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQP 256

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG-TYGIVIRTLGKGKKTD 387
           +    + ++  LC     +++  ++A  +  ++  +  +      Y  VI  L K  K D
Sbjct: 257 NVYTFSIIIHSLC-----KQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVD 311

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA +      E G  P   T+  +I   C + +I +A++    M E    P   + +  I
Sbjct: 312 EANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFI 371

Query: 448 TKL 450
           + L
Sbjct: 372 SCL 374



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 178/366 (48%), Gaps = 10/366 (2%)

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           + YG +P++   S ++      N    +  ++    + G       +  L++SL   GR+
Sbjct: 3   THYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRV 62

Query: 172 KEALEVLDQ--MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
            + + + ++    R+   P++ ++N ++KG+C VG+V++A E++  +   G  PD  T+ 
Sbjct: 63  HDVVALFERWIQDRVY-SPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHN 121

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVT-PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
            ++DG C+    +   E+L      GV  PNVVTF ++ +GYCK G     + +   M  
Sbjct: 122 ILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVA 181

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
              +P+ ++Y+ L+NG  K G +  AV ++++M R     D    +SL+ G C       
Sbjct: 182 SGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ--- 238

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA-IEMGHIPRTIT 407
             L+DA +++  M +     +  T+ I+I +L K  ++DEA+  L+   +     P+   
Sbjct: 239 --LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFI 296

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N VI  LC  GK+D+A L+   M E    P + +Y +LI       +  +A   +   +
Sbjct: 297 YNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMV 356

Query: 468 KQGVIP 473
           + G  P
Sbjct: 357 EAGCSP 362



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 155/308 (50%), Gaps = 10/308 (3%)

Query: 83  WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
           WS   FN ++  +  + + + A++     + +G +P++ T +I++   C  N+     +V
Sbjct: 83  WS---FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEV 139

Query: 143 IDCMFDNGY-HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           +  +  +G   PNV TFT +++  CK+G+L++A+ V + M   G  PN  TYN L+ G  
Sbjct: 140 LRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 199

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
            VG +  A E+   +      PDV T+++++DG+C+ G+ ++A+ + ++  +  + PNV 
Sbjct: 200 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVY 259

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           TF+ + +  CK+    + +GLL  +  R +  P    Y+ +++ L K GK+  A  I K 
Sbjct: 260 TFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKG 319

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M   G   D+     L+ G CMKS      + +A   F +M +     D  T    I  L
Sbjct: 320 MEEKGCRPDKYTYTILIIGYCMKSR-----ISEAIMFFHEMVEAGCSPDSITVNCFISCL 374

Query: 381 GKGKKTDE 388
            K    +E
Sbjct: 375 LKAGMPNE 382



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 1/216 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L++ + +++ +   G   +   +N L+     + +  +AV+ + + +     P+  
Sbjct: 165 KAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVV 224

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS +I  YC      +A ++   M  +   PNV TF+I+++SLCK  R  EA+ +L+++
Sbjct: 225 TFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNEL 284

Query: 182 G-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             R    P    YN ++  LC  G+V+EA  +   ++  G +PD YTYT ++ G+C   R
Sbjct: 285 NLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSR 344

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            +EA+   +E +E G +P+ +T N   +   K G P
Sbjct: 345 ISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMP 380



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 4/242 (1%)

Query: 71  DIFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++   +++DG    +V  F  ++       + E A+  +++  + G+ PN+ T++++I  
Sbjct: 138 EVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLING 197

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           Y    D   A +V   M      P+V TF+ L++  C+ G+L +AL +   M +   +PN
Sbjct: 198 YGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPN 257

Query: 190 IQTYNCLLKGLCYVGRVEEAYEML--MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           + T++ ++  LC   R +EA  +L  +N++ D + P  + Y  V+D  CK G+ +EA  +
Sbjct: 258 VYTFSIIIHSLCKQNRSDEAIGLLNELNLRPD-IAPQAFIYNPVIDVLCKCGKVDEANLI 316

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
                E+G  P+  T+  L  GYC +    + +     M +  C PD I+ +  ++ LLK
Sbjct: 317 RKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLK 376

Query: 308 WG 309
            G
Sbjct: 377 AG 378



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 1/191 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L   ++++  + +      V  F+ L+       + + A++ +S+ + + + PN +
Sbjct: 200 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVY 259

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCM-FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           TFSI+I   C +N   EA  +++ +       P    +  +++ LCK G++ EA  +   
Sbjct: 260 TFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKG 319

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC+P+  TY  L+ G C   R+ EA      +   G  PD  T    +    K G 
Sbjct: 320 MEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 379

Query: 241 SNEAMELLNEA 251
            NE   ++  A
Sbjct: 380 PNEVDHVMRLA 390


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 191/426 (44%), Gaps = 6/426 (1%)

Query: 49  PRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D  IK   L+    + D +   G   +   +N LL  L            
Sbjct: 233 PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSAL 292

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             E +S  + P+ +T+SI+        D      +      NG      T +IL+N LCK
Sbjct: 293 LDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCK 352

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G++  A EVL  +   G  P    YN L+ G C  G +E A+     +K+  +KPD  T
Sbjct: 353 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 412

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y A+++G CK  R   A +LL E  + GV P V TFNTL + Y + G   K   +L  M+
Sbjct: 413 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 472

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           +    P+ +SY +++N   K GKI  AV+I  +M       + ++ N+++      ++ E
Sbjct: 473 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII-----DAYVE 527

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
               + A+ + EKM          TY ++I+ L    +  EA   ++       IP  ++
Sbjct: 528 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 587

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I A C  G IDKAL L   M+++    +  +Y  LI+ L    +  +   LY   +
Sbjct: 588 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 647

Query: 468 KQGVIP 473
           +  V+P
Sbjct: 648 QNNVVP 653



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 177/391 (45%), Gaps = 6/391 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNW-SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
           + A  L E + +   + +DG    +   +N ++  +        AV+ F E +   + PN
Sbjct: 175 VAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPN 234

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             T++ MI  +    D     ++ D M  +G  PN  T+ +L++ LC++GR+ E   +LD
Sbjct: 235 HITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLD 294

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M      P+  TY+ L  GL   G  +    +      +G+    YT + +++G CK G
Sbjct: 295 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 354

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           + + A E+L   +  G+ P  V +NTL NGYC+ G           MK R+  PD I+Y+
Sbjct: 355 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 414

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            L+NGL K  +I  A  +  EM   G        N+L+      ++     LE  + V  
Sbjct: 415 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI-----DAYGRTGQLEKCFIVLS 469

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M +     +  +YG ++    K  K  EA+  L        +P    +N +I A    G
Sbjct: 470 EMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHG 529

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             D+A +L+  M  +   PS  +Y++LI  L
Sbjct: 530 PNDQAFILVEKMKSNGISPSIVTYNLLIKGL 560



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 177/370 (47%), Gaps = 12/370 (3%)

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
           DG  +S+     L   L    + +  +  F +    G+    +T SI++   C       
Sbjct: 304 DGFTYSI-----LFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSI 358

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A +V+  + + G  P    +  L+N  C++G L+ A     QM     KP+  TYN L+ 
Sbjct: 359 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 418

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC   R+  A ++LM ++++G+ P V T+  ++D + + G+  +   +L+E  E G+ P
Sbjct: 419 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 478

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           NVV++ ++ N +CK G   + V +L  M  ++ LP+   Y+ +++  ++ G    A  + 
Sbjct: 479 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 538

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
           ++M   G        N L++GLC +S      + +A ++   ++    + D  +Y  +I 
Sbjct: 539 EKMKSNGISPSIVTYNLLIKGLCNQSQ-----ISEAEEIINSLSNHRLIPDAVSYNTLIS 593

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
                   D+AL  L   +    I  T+ T++ +I  L G G++++   L   M ++  +
Sbjct: 594 ACCYRGNIDKAL-DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 652

Query: 438 PSRTSYDMLI 447
           PS   +++++
Sbjct: 653 PSNAIHNIMV 662



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 145/295 (49%), Gaps = 5/295 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+       E E A   F +  S  + P+  T++ +I   C       A+ ++  M 
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           DNG +P V TF  L+++  ++G+L++   VL +M   G KPN+ +Y  ++   C  G++ 
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA  +L ++ +  + P+   Y A++D + + G +++A  L+ +    G++P++VT+N L 
Sbjct: 498 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 557

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G C +    +   ++  +     +PD +SY+TL++     G I  A+ + + M ++G +
Sbjct: 558 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 617

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
              R  + L+ GL          L +   +++KM +   V     + I++    K
Sbjct: 618 STVRTYHQLISGLGGAGR-----LNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 667



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 125/262 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +    D+   ++ +G N +V  FN L+ A     + E      SE    GL PN  
Sbjct: 422 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 481

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++  ++  +C      EA  ++D MF     PN   +  ++++  + G   +A  ++++M
Sbjct: 482 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 541

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+I TYN L+KGLC   ++ EA E++ ++ N  L PD  +Y  ++   C  G  
Sbjct: 542 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 601

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A++L     + G+   V T++ L +G    G   +   L + M + N +P    ++ +
Sbjct: 602 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM 661

Query: 302 LNGLLKWGKIRPAVSIFKEMVR 323
           +    K+G    A  + KEM++
Sbjct: 662 VEAYSKYGNEIKAEDLRKEMLQ 683



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 129/322 (40%), Gaps = 41/322 (12%)

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD----------------------- 224
           P++ + N LL+ L  +GR  +       + + G +PD                       
Sbjct: 127 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 186

Query: 225 -------------VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
                         ++Y  V+ G  + GR  +A+E+ +E  ER V PN +T+NT+ +G+ 
Sbjct: 187 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 246

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           K G    G  L   M      P+ I+Y+ LL+GL + G++    ++  EM       D  
Sbjct: 247 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 306

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             + L  GL  ++ + K +L     +F K  K        T  I++  L K  K   A  
Sbjct: 307 TYSILFDGLS-RNGDSKAML----SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEE 361

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            L   +  G +P  + +N +I   C  G+++ A      M      P   +Y+ LI  L 
Sbjct: 362 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 421

Query: 452 QLEKSYDACALYGAALKQGVIP 473
           + E+  +A  L       GV P
Sbjct: 422 KAERITNAQDLLMEMQDNGVNP 443


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 160/337 (47%), Gaps = 6/337 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKE 173
           G+APN +T+  +I  +C      EA KV D M   G   P    +  L+   C  G+L  
Sbjct: 103 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 162

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           AL   D+M   G    + TYN L+  L   GR  EAYE++  +   GL PDV+TY  +++
Sbjct: 163 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 222

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G CK G   +A+E+      RGV   VVT+ +L     K+G   +   L     +R   P
Sbjct: 223 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 282

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D + Y+ L+N     G I  A  I  EM +     D+   N+L+RGLC+        +++
Sbjct: 283 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR-----VDE 337

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A ++ ++MTK+    D  TY  +I          +AL   +  +  G  P  +T+N +IQ
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 397

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            LC  G+ D A  ++  M E+   P  ++Y  LI  L
Sbjct: 398 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 166/318 (52%), Gaps = 6/318 (1%)

Query: 102 ETAVKFFSEASSYG-LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           + AVK F E  + G + P +  ++ +I  YC++     A    D M + G    V T+ +
Sbjct: 125 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 184

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           LV++L   GR  EA E++++MG  G  P++ TYN L+ G C  G V++A E+  N+   G
Sbjct: 185 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 244

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           ++  V TYT+++    K G+  E  +L +EA+ RG+ P++V +N L N +   G   +  
Sbjct: 245 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 304

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            ++  M+K+   PD ++Y+TL+ GL   G++  A  +  EM + G + D    N+L+ G 
Sbjct: 305 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 364

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            MK       ++DA ++  +M  K       TY  +I+ L K  + D+A   +   +E G
Sbjct: 365 SMKGD-----VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 419

Query: 401 HIPRTITFNNVIQALCGE 418
             P   T+ ++I+ L  E
Sbjct: 420 ITPDDSTYISLIEGLTTE 437



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 154/280 (55%), Gaps = 3/280 (1%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D + + G   +V+ +N L+ AL M      A +   E    GLAP+ +T++I+I  +C +
Sbjct: 168 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 227

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
            +  +A ++ + M   G    V T+T L+ +L K G+++E  ++ D+  R G +P++  Y
Sbjct: 228 GNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 287

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+      G ++ A+E++  ++   + PD  TY  +M G C +GR +EA +L++E  +
Sbjct: 288 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTK 347

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RG+ P++VT+NTL +GY  +G     + +   M  +   P  ++Y+ L+ GL K G+   
Sbjct: 348 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 407

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           A ++ KEMV  G   D+    SL+ GL   + E++  ++D
Sbjct: 408 AENMVKEMVENGITPDDSTYISLIEGL---TTEDERAIDD 444



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 174/358 (48%), Gaps = 7/358 (1%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFD-NGYHPNVTTFTILVNSLCKSGRLKEALE 176
           PN+ T++ +I  +C++     A  ++  M +  G  PN  T+  +++  CK GR+ EA++
Sbjct: 70  PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 129

Query: 177 VLDQMGRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           V D+M   G  KP    YN L+ G C  G+++ A      +   G+   V TY  ++   
Sbjct: 130 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 189

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
              GR  EA EL+ E   +G+ P+V T+N L NG+CKEG   K + + + M +R      
Sbjct: 190 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 249

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           ++Y++L+  L K G+++    +F E VR G   D  + N+L+      S      ++ A+
Sbjct: 250 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI-----NSHSTSGNIDRAF 304

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++  +M KK    D  TY  ++R L    + DEA   +    + G  P  +T+N +I   
Sbjct: 305 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 364

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +G +  AL +   M      P+  +Y+ LI  L +  +  DA  +    ++ G+ P
Sbjct: 365 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 422



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 157/320 (49%), Gaps = 11/320 (3%)

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
           TTF I++  LC +G+   ALE+L QM R    PN  TYN ++ G C  GRV+ A +++  
Sbjct: 42  TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 97

Query: 216 VKN-DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG-VTPNVVTFNTLFNGYCKE 273
           ++   G+ P+ YTY  V+ G+CKVGR +EA+++ +E + +G V P  V +N L  GYC +
Sbjct: 98  MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 157

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G     +     M +R       +Y+ L++ L   G+   A  + +EM   G   D    
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 217

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           N L+ G C +   +K     A ++FE M+++       TY  +I  L K  +  E     
Sbjct: 218 NILINGHCKEGNVKK-----ALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 272

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
             A+  G  P  + +N +I +    G ID+A  ++  M +    P   +Y+ L+  L  L
Sbjct: 273 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 332

Query: 454 EKSYDACALYGAALKQGVIP 473
            +  +A  L     K+G+ P
Sbjct: 333 GRVDEARKLIDEMTKRGIQP 352



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 155/320 (48%), Gaps = 6/320 (1%)

Query: 62  KASPLKERIDIFDSIKKDG-TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K   + E + +FD +   G        +N L+       + +TA+ +       G+A   
Sbjct: 120 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 179

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+++++          EA ++++ M   G  P+V T+ IL+N  CK G +K+ALE+ + 
Sbjct: 180 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 239

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G +  + TY  L+  L   G+V+E  ++       G++PD+  Y A+++     G 
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 299

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A E++ E  ++ + P+ VT+NTL  G C  G   +   L+  M KR   PD ++Y+T
Sbjct: 300 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 359

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G    G ++ A+ I  EM+  GF       N+L++GLC          +DA  + ++
Sbjct: 360 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG-----DDAENMVKE 414

Query: 361 MTKKVSVTDPGTYGIVIRTL 380
           M +     D  TY  +I  L
Sbjct: 415 MVENGITPDDSTYISLIEGL 434



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 112/212 (52%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K+ ++IF+++ + G   +V  +  L+ AL    + +   K F EA   G+ P+  
Sbjct: 226 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV 285

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  +    +   A +++  M      P+  T+  L+  LC  GR+ EA +++D+M
Sbjct: 286 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 345

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G +P++ TYN L+ G    G V++A  +   + N G  P + TY A++ G CK G+ 
Sbjct: 346 TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 405

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
           ++A  ++ E +E G+TP+  T+ +L  G   E
Sbjct: 406 DDAENMVKEMVENGITPDDSTYISLIEGLTTE 437



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 78/200 (39%), Gaps = 28/200 (14%)

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL----------- 350
           L+ LL      PA ++F +M R    +     N +LR LC      + L           
Sbjct: 13  LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNA 72

Query: 351 ---------------LEDAYQVFEKMTKKVSVT-DPGTYGIVIRTLGKGKKTDEALIHLH 394
                          ++ A  +  +M ++  +  +  TYG VI    K  + DEA+    
Sbjct: 73  VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 132

Query: 395 HAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
             +  G + P  + +N +I   C +GK+D ALL    M E     +  +Y++L+  L   
Sbjct: 133 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 192

Query: 454 EKSYDACALYGAALKQGVIP 473
            +  +A  L      +G+ P
Sbjct: 193 GRGTEAYELVEEMGGKGLAP 212


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 209/437 (47%), Gaps = 37/437 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L++    FD + +DG   +V  +  L+ A +   +  +A + F    S G  PN  
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586

Query: 122 TFSIMIRCYCNKNDFFEARKV------------IDCMF--DNG--YHPNVTTFTILVNSL 165
           T++ +I  +C      +A ++            +D  F  D+G    PN+ T+  LV+ L
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK+ ++KEA ++LD M   GC+PN   Y+ L+ G C VG+++EA  +   +   G  P+V
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           YTY++++D   K  R + A+++L+  +E    PNV+ +  + +G CK G   +   L+ +
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M+++ C P+ ++Y+ +++G  K GK+   + + ++M   G   +      L+   C    
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG- 825

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
               LL+DA+Q+ ++M +         Y  VI   G  ++   +L  L    E   +P  
Sbjct: 826 ----LLDDAHQLLDEMKQTYWPKHMAGYRKVIE--GFNREFIISLGLLDEIAENVAVPII 879

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM--------LITKLDQLEKSY 457
             +  +I + C  G+++ AL L      H ++ S TSY          LI  L    K  
Sbjct: 880 PAYRILIDSFCKAGRLELALEL------HKEMSSCTSYSAADKDLYSSLIESLSLASKVD 933

Query: 458 DACALYGAALKQGVIPQ 474
            A  LY   +K+G IP+
Sbjct: 934 KAFELYADMIKRGGIPE 950



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 198/473 (41%), Gaps = 87/473 (18%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +AS  +E +D    ++      +V  +  LL   +   +     +  S   + G  P+  
Sbjct: 311 EASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRR 370

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS----------------- 164
            F+ +I  YC   D+  A K++  M D G  P    + IL+                   
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430

Query: 165 ------------------------LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
                                   LC +G+ ++A  ++ +M   G  P+  TY+ ++  L
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C   +V+ A+ +   +K++ + PDV+TYT ++D FCKVG   +A +  +E +  G  PNV
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           VT+  L + Y K         L ++M    C+P+ ++Y+ L++G  K G+I  A  I+  
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 321 M--------VRFGFEVDERMM--------NSLLRGLC--MKSWEEKDL------------ 350
           M        V   F++D+  +         +L+ GLC   K  E +DL            
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670

Query: 351 ----------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
                           L++A  VF KM+++    +  TY  +I  L K K+ D AL  L 
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLS 730

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             +E    P  I +  +I  LC  GK D+A  L+ +M E    P+  +Y  +I
Sbjct: 731 RMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 173/359 (48%), Gaps = 21/359 (5%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           S ++ ++  L   ++ + A   F E  S  + P+ +T++I+I  +C      +ARK  D 
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M  +G  PNV T+T L+++  K+ ++  A E+ + M   GC PN+ TY  L+ G C  G+
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 206 VEEAYEMLMNVKNDGLKPDV----------------YTYTAVMDGFCKVGRSNEAMELLN 249
           +E+A ++   ++ +   PDV                +TY A++DG CK  +  EA +LL+
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
                G  PN + ++ L +G+CK G   +   +   M +R   P+  +YS+L++ L K  
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A+ +   M+      +  +   ++ GLC     +    ++AY++   M +K    +
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLC-----KVGKTDEAYRLMSMMEEKGCHPN 775

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             TY  +I   GK  K D+ L  +      G  P  +T+  +I   C  G +D A  LL
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 163/353 (46%), Gaps = 40/353 (11%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+  L   ++ + A       S  G  PN   +  +I  +C      EA+ V   M 
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + GY PNV T++ L++ L K  RL  AL+VL +M    C PN+  Y  ++ GLC VG+ +
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EAY ++  ++  G  P+V TYTA++DGF K G+ ++ +EL+ +   +G  PN VT+  L 
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 268 NGYCKEG------------------TPMKG---------------VGLLKLMKKRNCLPD 294
           N  C  G                    M G               +GLL  + +   +P 
Sbjct: 819 NHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPI 878

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFG--FEVDERMMNSLLRGLCMKSWEEKDLLE 352
             +Y  L++   K G++  A+ + KEM         D+ + +SL+  L + S  +K    
Sbjct: 879 IPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDK---- 934

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            A++++  M K+  + +   +  +++ L +  + +EAL       +M H+  +
Sbjct: 935 -AFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCICQMVHVSNS 986



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 160/366 (43%), Gaps = 16/366 (4%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+  T++ ++R +   +    A  V   M D+G++ +  T    V+ LCK+GR +EA
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L ++++      K +   Y  ++ GLC     EEA + L  +++    P+V TY  ++ G
Sbjct: 287 LALIEKEEF---KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
             +  +      +L+  I  G  P+   FN+L + YC+ G       LLK M    C P 
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403

Query: 295 KISYSTLLNGLLKWGKIRPAVSI-------FKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            + Y+ L+ G+    K+ P++ +       + EM+     +++  +++L R LC     E
Sbjct: 404 YVVYNILIGGICGNEKL-PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFE 462

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           K     AY +  +M  K  + D  TY  VI  L    K D A +          +P   T
Sbjct: 463 K-----AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +  +I + C  G + +A      M      P+  +Y  LI    +  K   A  L+   L
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 468 KQGVIP 473
            +G IP
Sbjct: 578 SEGCIP 583



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 152/351 (43%), Gaps = 10/351 (2%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
            +++IR  C    +  A + +  + D GY P+  T+  LV    ++ RL  A  V  +M 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G   +  T  C +  LC  GR  EA  +   ++ +  K D   YT ++ G C+     
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFE 316

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EAM+ L+        PNVVT+  L  G  ++    +   +L +M    C P +  +++L+
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEEKDLLEDAYQVFEKM 361
           +   + G    A  + K+M   G +    + N L+ G+C  +     D+LE A + + +M
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEM 436

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                V +      + R L    K ++A   +   +  G IP T T++ VI  LC   K+
Sbjct: 437 LDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKV 496

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITK------LDQLEKSYDACALYGAA 466
           D A LL   M  +  +P   +Y +LI        L Q  K +D     G A
Sbjct: 497 DNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 5/295 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   +F  + + G   +V  ++ L+  L      + A+K  S       APN  
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVI 742

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ MI   C      EA +++  M + G HPNV T+T +++   K+G++ + LE++ QM
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           G  GC PN  TY  L+   C  G +++A+++L  +K       +  Y  V++GF +    
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EF 860

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK--RNCLPDKISYS 299
             ++ LL+E  E    P +  +  L + +CK G     + L K M         DK  YS
Sbjct: 861 IISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYS 920

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLED 353
           +L+  L    K+  A  ++ +M++ G   +  +   L++GL  +  WEE   L D
Sbjct: 921 SLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 183/388 (47%), Gaps = 5/388 (1%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + +N +++AL      +       +    GL PN  T++ ++  +C   +   A  ++  
Sbjct: 235 ASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILAR 294

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G  PNV TFT LV  L   GR+ +AL++   M   G  P+  +YN L++GLC VG 
Sbjct: 295 MVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGD 354

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++ A  +L +++  G  P+  TY+ ++DGF K G  + A+ + N+    G  PNVV +  
Sbjct: 355 LKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTN 414

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +   +CK+    +   L+  M   NC P+ ++++TL+  L    ++  A+ +F EM R G
Sbjct: 415 MVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHG 474

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              + R  N LL GL    + E +   DA Q+  +M          TY  V+  L + + 
Sbjct: 475 CPPNGRTYNELLHGL----FREGN-CGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRM 529

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             EA+  +   I  G  P   TF  +I A C EG++  A  +L  M       +   Y +
Sbjct: 530 GREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTI 589

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           L+ +L   +K  DA       L +G+ P
Sbjct: 590 LMAELCNQDKLEDAMVYLLKMLYEGIYP 617



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 188/421 (44%), Gaps = 45/421 (10%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+ AL+  N               G+ PN +T+++++R  C  +    ARK++D M 
Sbjct: 137 YNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMA 196

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+  T+  +V++LC  GR+ EA EVL         P   +YN ++  LC   R++
Sbjct: 197 TKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAA-----PPVAASYNAVILALCREFRMQ 251

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF---- 263
           E + ++ ++   GL+P+V TYT +++ FCK G    A  +L   +  G TPNV TF    
Sbjct: 252 EVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALV 311

Query: 264 -------------------------------NTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                                          N L  G C  G       +L  M++  C 
Sbjct: 312 GGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCF 371

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+  +YSTL++G  K G +  A+SI+ +M R G + +  +  +++   C     +K +  
Sbjct: 372 PNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFC-----KKLMFN 426

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A  + +KM  +    +  T+  +IR+L   ++   AL   H     G  P   T+N ++
Sbjct: 427 QAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELL 486

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
             L  EG    AL ++  M  H    S  +Y+ +++ L Q+    +A    G  + +G+ 
Sbjct: 487 HGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQ 546

Query: 473 P 473
           P
Sbjct: 547 P 547



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 175/383 (45%), Gaps = 7/383 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   +   +   G   +V  +  ++ A     E   A    +     G  PN  TF+ 
Sbjct: 250 MQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTA 309

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++    N     +A  +  CM   G+ P+  ++ +L+  LC  G LK A  VL+ M + G
Sbjct: 310 LVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHG 369

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN +TY+ L+ G    G ++ A  +  ++   G KP+V  YT ++  FCK    N+A 
Sbjct: 370 CFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAE 429

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L+++ +     PN VTFNTL    C      + +G+   M++  C P+  +Y+ LL+GL
Sbjct: 430 SLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGL 489

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + G    A+ +  EM   G E+     N+++ GLC     +  +  +A     +M  + 
Sbjct: 490 FREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLC-----QMRMGREAMFFVGRMIVRG 544

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA-LCGEGKIDKA 424
              D  T+  +I    K  +   A   L  A+ + +  R I    ++ A LC + K++ A
Sbjct: 545 IQPDAFTFTAIIHAYCKEGEVRMAAWIL-GAMNVVNCGRNILVYTILMAELCNQDKLEDA 603

Query: 425 LLLLFLMYEHAKIPSRTSYDMLI 447
           ++ L  M      P+  ++++L+
Sbjct: 604 MVYLLKMLYEGIYPNTVTWNVLV 626



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 135/275 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK    + + +++ G   +   ++ L+       + + A+  +++ +  G  PN   ++ 
Sbjct: 355 LKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTN 414

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           M+  +C K  F +A  +ID M      PN  TF  L+ SLC   R+  AL V  +M R G
Sbjct: 415 MVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHG 474

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN +TYN LL GL   G   +A +M++ ++N G++  + TY  V+ G C++    EAM
Sbjct: 475 CPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAM 534

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
             +   I RG+ P+  TF  + + YCKEG       +L  M   NC  + + Y+ L+  L
Sbjct: 535 FFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAEL 594

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
               K+  A+    +M+  G   +    N L+RG+
Sbjct: 595 CNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGV 629



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 146/313 (46%), Gaps = 5/313 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + +D++  +  +G   S   +N L+  L  + + + A    ++   +G  PN+ T+S 
Sbjct: 320 VHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYST 379

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +    D   A  + + M  +G  PNV  +T +V   CK     +A  ++D+M    
Sbjct: 380 LIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVEN 439

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN  T+N L++ LC   RV  A  +   ++  G  P+  TY  ++ G  + G   +A+
Sbjct: 440 CPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDAL 499

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +++ E    G+  ++VT+NT+ +G C+     + +  +  M  R   PD  +++ +++  
Sbjct: 500 QMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAY 559

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G++R A  I   M      V     N L+  + M     +D LEDA     KM  + 
Sbjct: 560 CKEGEVRMAAWILGAM-----NVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEG 614

Query: 366 SVTDPGTYGIVIR 378
              +  T+ +++R
Sbjct: 615 IYPNTVTWNVLVR 627



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 10/222 (4%)

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           GV PNV T+N L    C+         +L  M  + C PD ++Y T+++ L   G++  A
Sbjct: 164 GVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEA 223

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
             +                N+++  LC      +  +++ + V   M  +    +  TY 
Sbjct: 224 TEVLSAAPPVAAS-----YNAVILALC-----REFRMQEVFAVVGDMVGRGLQPNVITYT 273

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
            ++    K  +   A   L   +  G  P   TF  ++  L  +G++  AL +   M   
Sbjct: 274 TIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAE 333

Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
              PS  SY++LI  L  +     A ++     + G  P  +
Sbjct: 334 GWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNAR 375


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 209/437 (47%), Gaps = 37/437 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L++    FD + +DG   +V  +  L+ A +   +  +A + F    S G  PN  
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586

Query: 122 TFSIMIRCYCNKNDFFEARKV------------IDCMF--DNG--YHPNVTTFTILVNSL 165
           T++ +I  +C      +A ++            +D  F  D+G    PN+ T+  LV+ L
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK+ ++KEA ++LD M   GC+PN   Y+ L+ G C VG+++EA  +   +   G  P+V
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           YTY++++D   K  R + A+++L+  +E    PNV+ +  + +G CK G   +   L+ +
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M+++ C P+ ++Y+ +++G  K GK+   + + ++M   G   +      L+   C    
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG- 825

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
               LL+DA+Q+ ++M +         Y  VI   G  ++   +L  L    E   +P  
Sbjct: 826 ----LLDDAHQLLDEMKQTYWPKHMAGYRKVIE--GFNREFIISLGLLDEIAENVAVPII 879

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM--------LITKLDQLEKSY 457
             +  +I + C  G+++ AL L      H ++ S TSY          LI  L    K  
Sbjct: 880 PAYRILIDSFCKAGRLELALEL------HKEMSSCTSYSAADKDLYSSLIESLSLASKVD 933

Query: 458 DACALYGAALKQGVIPQ 474
            A  LY   +K+G IP+
Sbjct: 934 KAFELYADMIKRGGIPE 950



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 198/473 (41%), Gaps = 87/473 (18%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +AS  +E +D    ++      +V  +  LL   +   +     +  S   + G  P+  
Sbjct: 311 EASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRR 370

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS----------------- 164
            F+ +I  YC   D+  A K++  M D G  P    + IL+                   
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430

Query: 165 ------------------------LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
                                   LC +G+ ++A  ++ +M   G  P+  TY+ ++  L
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C   +V+ A+ +   +K++ + PDV+TYT ++D FCKVG   +A +  +E +  G  PNV
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           VT+  L + Y K         L ++M    C+P+ ++Y+ L++G  K G+I  A  I+  
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 321 M--------VRFGFEVDERMM--------NSLLRGLC--MKSWEEKDL------------ 350
           M        V   F++D+  +         +L+ GLC   K  E +DL            
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670

Query: 351 ----------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
                           L++A  VF KM+++    +  TY  +I  L K K+ D AL  L 
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLS 730

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             +E    P  I +  +I  LC  GK D+A  L+ +M E    P+  +Y  +I
Sbjct: 731 RMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 173/359 (48%), Gaps = 21/359 (5%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           S ++ ++  L   ++ + A   F E  S  + P+ +T++I+I  +C      +ARK  D 
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M  +G  PNV T+T L+++  K+ ++  A E+ + M   GC PN+ TY  L+ G C  G+
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 206 VEEAYEMLMNVKNDGLKPDV----------------YTYTAVMDGFCKVGRSNEAMELLN 249
           +E+A ++   ++ +   PDV                +TY A++DG CK  +  EA +LL+
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
                G  PN + ++ L +G+CK G   +   +   M +R   P+  +YS+L++ L K  
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A+ +   M+      +  +   ++ GLC     +    ++AY++   M +K    +
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLC-----KVGKTDEAYRLMSMMEEKGCHPN 775

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             TY  +I   GK  K D+ L  +      G  P  +T+  +I   C  G +D A  LL
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 158/338 (46%), Gaps = 40/338 (11%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+  L   ++ + A       S  G  PN   +  +I  +C      EA+ V   M 
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + GY PNV T++ L++ L K  RL  AL+VL +M    C PN+  Y  ++ GLC VG+ +
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EAY ++  ++  G  P+V TYTA++DGF K G+ ++ +EL+ +   +G  PN VT+  L 
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 268 NGYCKEG------------------TPMKG---------------VGLLKLMKKRNCLPD 294
           N  C  G                    M G               +GLL  + +   +P 
Sbjct: 819 NHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPI 878

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFG--FEVDERMMNSLLRGLCMKSWEEKDLLE 352
             +Y  L++   K G++  A+ + KEM         D+ + +SL+  L + S  +K    
Sbjct: 879 IPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDK---- 934

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
            A++++  M K+  + +   +  +++ L +  + +EAL
Sbjct: 935 -AFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEAL 971



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 160/366 (43%), Gaps = 16/366 (4%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+  T++ ++R +   +    A  V   M D+G++ +  T    V+ LCK+GR +EA
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L ++++      K +   Y  ++ GLC     EEA + L  +++    P+V TY  ++ G
Sbjct: 287 LALIEKEEF---KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
             +  +      +L+  I  G  P+   FN+L + YC+ G       LLK M    C P 
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403

Query: 295 KISYSTLLNGLLKWGKIRPAVSI-------FKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            + Y+ L+ G+    K+ P++ +       + EM+     +++  +++L R LC     E
Sbjct: 404 YVVYNILIGGICGNEKL-PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFE 462

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           K     AY +  +M  K  + D  TY  VI  L    K D A +          +P   T
Sbjct: 463 K-----AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +  +I + C  G + +A      M      P+  +Y  LI    +  K   A  L+   L
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 468 KQGVIP 473
            +G IP
Sbjct: 578 SEGCIP 583



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 152/351 (43%), Gaps = 10/351 (2%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
            +++IR  C    +  A + +  + D GY P+  T+  LV    ++ RL  A  V  +M 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G   +  T  C +  LC  GR  EA  +   ++ +  K D   YT ++ G C+     
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFE 316

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EAM+ L+        PNVVT+  L  G  ++    +   +L +M    C P +  +++L+
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEEKDLLEDAYQVFEKM 361
           +   + G    A  + K+M   G +    + N L+ G+C  +     D+LE A + + +M
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEM 436

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                V +      + R L    K ++A   +   +  G IP T T++ VI  LC   K+
Sbjct: 437 LDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKV 496

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITK------LDQLEKSYDACALYGAA 466
           D A LL   M  +  +P   +Y +LI        L Q  K +D     G A
Sbjct: 497 DNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 5/295 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   +F  + + G   +V  ++ L+  L      + A+K  S       APN  
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVI 742

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ MI   C      EA +++  M + G HPNV T+T +++   K+G++ + LE++ QM
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           G  GC PN  TY  L+   C  G +++A+++L  +K       +  Y  V++GF +    
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EF 860

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK--RNCLPDKISYS 299
             ++ LL+E  E    P +  +  L + +CK G     + L K M         DK  YS
Sbjct: 861 IISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYS 920

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLED 353
           +L+  L    K+  A  ++ +M++ G   +  +   L++GL  +  WEE   L D
Sbjct: 921 SLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 185/389 (47%), Gaps = 5/389 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  F  ++       E E +     E   +G +PN   ++ +I   C K +  +A+ +  
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G   N  T+T+L++ L K+G  K+  E+ ++M   G  PN+ TYNC++  LC  G
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDG 282

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R ++A+++   ++  G+  ++ TY  ++ G C+  ++NEA E++++    G+ PN++T+N
Sbjct: 283 RTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYN 342

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL +G+C      K + L + +K R   P  ++Y+ L++G  K G    A  + KEM   
Sbjct: 343 TLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEER 402

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G +  +     L+      ++   D +E A Q+   M +     D  TY ++I       
Sbjct: 403 GIKPSKVTYTILI-----DTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKG 457

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + +EA       +E    P  + +N ++   C EG   +AL L   M E    P+  SY 
Sbjct: 458 RMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYR 517

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            +I  L +  KS +A  L    +  G+ P
Sbjct: 518 YMIEVLCKERKSKEAEGLVEKMIDSGIGP 546



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 202/403 (50%), Gaps = 6/403 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +++  L   I  F+ +   G     + FN+LL  +V  +       FF+E S   +  + 
Sbjct: 105 VQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-SKIKVVLDV 163

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           ++F I+I+  C   +  ++  ++  + + G+ PNV  +T L++  CK G +++A ++  +
Sbjct: 164 YSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           MG+ G   N  TY  L+ GL   G  ++ +EM   ++  G+ P+++TY  VM+  CK GR
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGR 283

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           + +A ++ +E  ERGV+ N+VT+NTL  G C+E    +   ++  MK     P+ I+Y+T
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G     K+  A+S+ +++   G        N L+ G C     +K     A +V ++
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC-----KKGDTSGAGKVVKE 398

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M ++       TY I+I T  +    ++A+       E+G  P   T++ +I   C +G+
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGR 458

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +++A  L   M E    P+   Y+ ++    +   SY A  L+
Sbjct: 459 MNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLF 501



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 177/353 (50%), Gaps = 5/353 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++  D+F  + K G   +   +  L+  L     ++   + + +   +G+ PN  
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLH 269

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++   C      +A KV D M + G   N+ T+  L+  LC+  +  EA EV+DQM
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM 329

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN+ TYN L+ G C V ++ +A  +  ++K+ GL P + TY  ++ GFCK G +
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A +++ E  ERG+ P+ VT+  L + + +     K + L   M++    PD  +YS L
Sbjct: 390 SGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVL 449

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++G    G++  A  +FK MV   FE +E + N+++ G C +    +     A ++F +M
Sbjct: 450 IHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYR-----ALRLFREM 504

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            +K    +  +Y  +I  L K +K+ EA   +   I+ G  P     N + +A
Sbjct: 505 EEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRA 557



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 148/295 (50%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K+   +FD +++ G + ++  +N L+  L    +   A +   +  S G+ PN  T++ +
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTL 344

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I  +C      +A  +   +   G  P++ T+ ILV+  CK G    A +V+ +M   G 
Sbjct: 345 IDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGI 404

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           KP+  TY  L+        +E+A ++  +++  GL PDV+TY+ ++ GFC  GR NEA  
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASR 464

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L    +E+   PN V +NT+  GYCKEG+  + + L + M+++   P+  SY  ++  L 
Sbjct: 465 LFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           K  K + A  + ++M+  G    + ++N + R          D  E A  VF+ +
Sbjct: 525 KERKSKEAEGLVEKMIDSGIGPSDSILNLISRAKNDSHSRSMDEEEPASMVFDGL 579



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 115/280 (41%), Gaps = 39/280 (13%)

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTP----------------------------- 258
           Y  +++ + +    + ++   NE +++G  P                             
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 259 -----NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
                +V +F  +  G C+ G   K   LL  +++    P+ + Y+TL++G  K G+I  
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A  +F EM +FG   +E     L+ GL      +  + +  ++++EKM +     +  TY
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLF-----KNGIKKQGFEMYEKMQEHGVFPNLHTY 271

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             V+  L K  +T +A        E G     +T+N +I  LC E K ++A  ++  M  
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKS 331

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               P+  +Y+ LI     + K   A +L      +G+ P
Sbjct: 332 DGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSP 371


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 183/387 (47%), Gaps = 15/387 (3%)

Query: 88  FNDLLMALV---MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
            N LLMAL    M  + E+        +S   A N  T++ +I  YC   D   A++ + 
Sbjct: 44  LNTLLMALARHRMFPDMESL-------ASRMPARNLRTYTTLINAYCLAGDIPAAKQHLT 96

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   G  P+   +T  V   C++G L  A  V   M   GC     TY  LL GL   G
Sbjct: 97  SLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAG 156

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            V EA  + + ++ D   PD + Y  ++ G C+ GR+ EA  LL EA+  G  PN+V +N
Sbjct: 157 MVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYN 216

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +GYC  G     + + + M    C P+  +Y+ L++GL K GK+  A+ +F  MV  
Sbjct: 217 ALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA 276

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G E +     +L++G C +       L+ A+++   M     V +  T+ ++I  L K +
Sbjct: 277 GLEPNVVTYTALIQGQCNEGH-----LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKRE 331

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           K +EA + L   ++ G     + + ++I  LC  GKID A  L+  M     +P   SY 
Sbjct: 332 KVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYS 391

Query: 445 MLITKLDQLEKSYDACALYGAALKQGV 471
            LI  L + +K   A  +    +++G+
Sbjct: 392 SLIDGLCRQKKLSQATLMLEDMMEKGI 418



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 186/400 (46%), Gaps = 6/400 (1%)

Query: 49  PRSLQAQRFV-DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S     FV    +A  L     +F  +   G   +   +  LL  L+       A+  
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTV 164

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F    +   AP++  ++ M+   C      EA  +++    NG+ PN+  +  L++  C 
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCN 224

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G ++ AL+V + M    C PN++TY  L+ GLC  G+VE A  +   +   GL+P+V T
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           YTA++ G C  G    A  LL+     G+ PN  TF+ L +  CK     +    L  + 
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
           K+    +++ Y++L++GL K GKI  A  + ++M+  GF  D    +SL+ GLC      
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC-----R 399

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           +  L  A  + E M +K     P TY I+I  L +   ++         I  G  P  +T
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +   +++ C EG+++ A  ++  M +    P+  +Y+ LI
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 188/387 (48%), Gaps = 5/387 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           + A  ++E + +F  ++ D        +  ++  L      E A     EA S G  PN 
Sbjct: 153 LGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNI 212

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             ++ +I  YCN  +   A KV + M  N   PNV T+T L++ LCKSG+++ A+ +  +
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G +PN+ TY  L++G C  G ++ A+ +L  ++ +GL P+ +T++ ++D  CK  +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA   L   +++GV  N V + +L +G CK G       L++ M     +PD  SYS+
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++GL +  K+  A  + ++M+  G +        ++  L  +        E   ++F+K
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS-----EGPKKIFDK 447

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M       D  TY + +R+  +  + ++A   +   ++ G  P  +T+N +I+     G 
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLI 447
           + +A     +M      P+  SY +L+
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLL 534



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 159/336 (47%), Gaps = 9/336 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  ++  + +F  + + G   +V  +  L+         + A +      + GL PN W
Sbjct: 259 KSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS++I   C +    EA+  +  +   G   N   +T L++ LCK+G++  A E++ +M
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  +Y+ L+ GLC   ++ +A  ML ++   G++    TYT ++D   +   S
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
               ++ ++ I  G+ P++VT+      YC+EG       ++  M  R   P+ ++Y+TL
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS--------WEEKDLLED 353
           + G    G +  A S F+ MV  G++ +E     LLR +  KS        W+  D ++D
Sbjct: 499 IRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIAD-MKD 557

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
              + E +T++        Y   IR L +  + +EA
Sbjct: 558 LQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEA 593



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 80/215 (37%), Gaps = 47/215 (21%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L +   + + + + G   S   +  ++  LV     E   K F +  + G+ P+  T+++
Sbjct: 403 LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTV 462

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +R YC +    +A  +I  M D G  PN+ T+  L+      G + +A    + M   G
Sbjct: 463 FVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKG 522

Query: 186 CKPN-----------------------------------------------IQTYNCLLK 198
            KPN                                                  Y+C ++
Sbjct: 523 WKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIR 582

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
            LC V R+EEA    M ++N  L P    YT+++D
Sbjct: 583 CLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 193/385 (50%), Gaps = 19/385 (4%)

Query: 60  RIKASPLKERIDIFDSIK--KDGTNWSVSDFNDLLMALVM-----LNEQETAVKFFSEAS 112
           R++ +P+ E   +  ++   +D  ++     N +L AL       L +  + +   S  +
Sbjct: 61  RLRGAPVTEACSLLSALPDVRDAVSY-----NTVLAALCRRGGDHLRQARSLLVDMSREA 115

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
                PN+ +++ ++R  C      EA  ++  M  +G   +V T+  L+  LC +  L 
Sbjct: 116 HPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELD 175

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
            ALE+LD+M   G +PN+  Y+CLL+G C  GR ++  ++  ++   G+KPDV  +T ++
Sbjct: 176 AALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLI 235

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           D  CK G++ +A ++ +  ++RG+ PNVVT+N L N  CKEG+  + + L K M  +   
Sbjct: 236 DDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVA 295

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG--FEVDERMMNSLLRGLCMKSWEEKDL 350
           PD ++Y+TL+ GL    ++  A+S  +EM++     E D    NS++ GLC     +   
Sbjct: 296 PDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLC-----KIGR 350

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           +  A +V E M ++  + +  TY  +I    +  K   A+  +      G  P + T++ 
Sbjct: 351 MTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSI 410

Query: 411 VIQALCGEGKIDKALLLLFLMYEHA 435
           +I       ++D+A   L  M +  
Sbjct: 411 LINGFSKMWEVDRAEKFLCTMRQRG 435



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 192/430 (44%), Gaps = 66/430 (15%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + +  S++  G    V  +  L+  L   +E + A++   E    G+ PN   +S ++
Sbjct: 141 EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLL 200

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           R YC    + +  KV + M   G  P+V  FT L++ LCK G+  +A +V D M + G +
Sbjct: 201 RGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE 260

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN+ TYN L+  LC  G V EA  +   + + G+ PDV TY  ++ G   V   +EAM  
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSF 320

Query: 248 LNEAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           L E I+    V P+VVTFN++ +G CK G   + V + ++M +R C+ + ++Y+ L+ G 
Sbjct: 321 LEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGF 380

Query: 306 LKWGKIRPAVSIFKEMVRFG------------------FEVD----------ERMMNS-- 335
           L+  K++ A+++  E+   G                  +EVD          +R + +  
Sbjct: 381 LRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAEL 440

Query: 336 -----LLRGLCMKSWEEKDL-----------------------------LEDAYQVFEKM 361
                LL  +C +   E+ +                             ++   Q+ + M
Sbjct: 441 FHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDM 500

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             +    D  TY ++I    K    +EA   L      G +P    F+++I+    EG+ 
Sbjct: 501 LDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQT 560

Query: 422 DKALLLLFLM 431
           DK L L+  M
Sbjct: 561 DKVLKLIHEM 570



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 155/309 (50%), Gaps = 12/309 (3%)

Query: 154 NVTTFTILVNSLCKSG--RLKEALEVLDQMGR---IGCKPNIQTYNCLLKGLCYVGRVEE 208
           +  ++  ++ +LC+ G   L++A  +L  M R      +PN  +Y  +++GLC   R  E
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +L +++  G++ DV TY  ++ G C     + A+ELL+E    GV PNVV ++ L  
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           GYC+ G       + + M +R   PD I ++ L++ L K GK   A  +   MV+ G E 
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           +    N L+  LC     ++  + +A  + ++M  K    D  TY  +I  L    + DE
Sbjct: 262 NVVTYNVLINSLC-----KEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDE 316

Query: 389 ALIHLHHAIEMGHI--PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           A+  L   I+   +  P  +TFN+VI  LC  G++ +A+ +  +M E   + +  +Y+ L
Sbjct: 317 AMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYL 376

Query: 447 ITKLDQLEK 455
           I    ++ K
Sbjct: 377 IGGFLRVHK 385



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 166/338 (49%), Gaps = 10/338 (2%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D + + G   +V  +N L+ +L        A+    E    G+AP+  T++ +I      
Sbjct: 252 DMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGV 311

Query: 134 NDFFEARKVIDCMF--DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +  EA   ++ M   D    P+V TF  +++ LCK GR+ +A++V + M   GC  N+ 
Sbjct: 312 LEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLV 371

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G   V +V+ A  ++  +   GL+PD +TY+ +++GF K+   + A + L   
Sbjct: 372 TYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTM 431

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            +RG+   +  +  L    C++G   + +GL   M K NC  D I+YST+++G  K G +
Sbjct: 432 RQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGACKSGDM 490

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           +    + ++M+  G   D     ++   + +  + +   LE+A +V ++MT    V D  
Sbjct: 491 KTVKQLIQDMLDEGLAPD-----AVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVA 545

Query: 372 TYGIVIRTLGKGKKTDEA--LIHLHHAIEMGHIPRTIT 407
            +  +I+      +TD+   LIH   A  +   P+ I+
Sbjct: 546 VFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIIS 583



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 123/241 (51%), Gaps = 1/241 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + + + + + + G   ++  +N L+   + +++ + A+    E +  GL P+S+
Sbjct: 347 KIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSF 406

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+I  +    +   A K +  M   G    +  +  L+ ++C+ G ++ A+ + ++M
Sbjct: 407 TYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM 466

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +  C  +   Y+ ++ G C  G ++   +++ ++ ++GL PD  TY+ +++ + K+G  
Sbjct: 467 DK-NCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDL 525

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  +L +    G  P+V  F++L  GY  EG   K + L+  M+ +N   D    ST+
Sbjct: 526 EEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTI 585

Query: 302 L 302
           +
Sbjct: 586 I 586



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/313 (21%), Positives = 133/313 (42%), Gaps = 36/313 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE--ASSYGLAPN 119
           K   ++E + +   +   G    V  +N L+  L  + E + A+ F  E       + P+
Sbjct: 275 KEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPD 334

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
             TF+ +I   C      +A KV + M + G   N+ T+  L+    +  ++K A+ ++D
Sbjct: 335 VVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMD 394

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           ++   G +P+  TY+ L+ G   +  V+ A + L  ++  G+K +++ Y  ++   C+ G
Sbjct: 395 ELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQG 454

Query: 240 RSNEAMELLNEA----------------------------------IERGVTPNVVTFNT 265
               AM L NE                                   ++ G+ P+ VT++ 
Sbjct: 455 MMERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSM 514

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L N Y K G   +   +LK M     +PD   + +L+ G    G+    + +  EM    
Sbjct: 515 LINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKN 574

Query: 326 FEVDERMMNSLLR 338
              D +++++++R
Sbjct: 575 VAFDPKIISTIIR 587



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 101/256 (39%), Gaps = 47/256 (18%)

Query: 224 DVYTYTAVMDGFCKVGRSN--EAMELL---NEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           D  +Y  V+   C+ G  +  +A  LL   +        PN V++ T+  G C      +
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            V LL+ M+      D ++Y TL+ GL    ++  A+ +  EM   G + +  + + LLR
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 339 GLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
           G C    W+      D  +VFE M+++                                 
Sbjct: 202 GYCRSGRWQ------DVGKVFEDMSRR--------------------------------- 222

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             G  P  I F  +I  LC EGK  KA  +  +M +    P+  +Y++LI  L +     
Sbjct: 223 --GIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVR 280

Query: 458 DACALYGAALKQGVIP 473
           +A  L      +GV P
Sbjct: 281 EALTLRKEMDDKGVAP 296


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 178/378 (47%), Gaps = 6/378 (1%)

Query: 87  DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           DF  L   +V +    TA+       S G+ P+  T +I+I C C+         V+  M
Sbjct: 9   DFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAM 68

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
           F  G  P V TF  L+N LC  G +  A    D +  +G + N  T+  ++ GLC VG  
Sbjct: 69  FKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDT 128

Query: 207 EEAYEMLMNVKNDGLKPDVY-TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
             A   L  ++      D+   Y+ +MD  CK G    A+   +    +G+ P++V +N+
Sbjct: 129 AGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNS 188

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G C  G   +   LL  M ++  +P+  +++ L++   K GKI  A +I   MV  G
Sbjct: 189 LIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVG 248

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            E D    NS++ G C+ S      + DA +VFE M  K  + +  TY  +I    K + 
Sbjct: 249 VEPDVVTYNSVISGHCLLSQ-----MNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRN 303

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            ++A+  L   +  G     +T++ +I   C  G+ + A+ L   M+EH ++P+  +  +
Sbjct: 304 INKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAI 363

Query: 446 LITKLDQLEKSYDACALY 463
           ++  L + +   +A +L+
Sbjct: 364 ILDGLFKCQFHSEAISLF 381



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 182/345 (52%), Gaps = 5/345 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A+ FFS  +  G+ P+   ++ +I   C+   + EA  ++  M   G  PNV TF +LV+
Sbjct: 167 ALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVD 226

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           + CK G++  A  ++  M  +G +P++ TYN ++ G C + ++ +A ++   + + GL P
Sbjct: 227 NFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLP 286

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V TY++++ G+CK    N+A+ +L+E +  G+  +VVT++TL  G+CK G P   + L 
Sbjct: 287 NVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELF 346

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M + + LP+  + + +L+GL K      A+S+F++M +   E++    N +L G+C  
Sbjct: 347 CTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMC-- 404

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
           S+ +     DA ++F  +  K    D   Y  +I+ L K    D+A   L    E G  P
Sbjct: 405 SFGK---FNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPP 461

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
              T+N +++ L     I ++   L LM         T+ ++LI+
Sbjct: 462 NEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLIS 506



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 183/413 (44%), Gaps = 33/413 (7%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +  ++ K G   +V  F  L+  L        A +F       G   NS+T   +I   C
Sbjct: 64  VLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLC 123

Query: 132 NKNDFFEARKVIDCM--FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
              D   A   ++ +   + G+   +  ++ +++SLCK G L  AL     M   G +P+
Sbjct: 124 KVGDTAGAISYLEKIEGRNRGFDL-LIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPD 182

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           +  YN L+ GLC  GR  EA  +L N+   G+ P+V T+  ++D FCK G+ + A  ++ 
Sbjct: 183 LVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMC 242

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             +  GV P+VVT+N++ +G+C        V + +LM  +  LP+ ++YS+L++G  K  
Sbjct: 243 FMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTR 302

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL------------------- 350
            I  A+ +  EMV  G  +D    ++L+ G C     E  +                   
Sbjct: 303 NINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCA 362

Query: 351 -----------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
                        +A  +F KM K     +  TY IV+  +    K ++A          
Sbjct: 363 IILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSK 422

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           G     + +  +I+ LC EG +D A  LL  M E+   P+  +Y++L+  L Q
Sbjct: 423 GIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQ 475



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 151/311 (48%), Gaps = 5/311 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++ F  +   G    +  +N L+  L        A          G+ PN  TF++++  
Sbjct: 168 LNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDN 227

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C +     A+ ++  M   G  P+V T+  +++  C   ++ +A++V + M   G  PN
Sbjct: 228 FCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPN 287

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY+ L+ G C    + +A  +L  + N+GL  DV T++ ++ GFCK GR   A+EL  
Sbjct: 288 VVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFC 347

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
              E    PN+ T   + +G  K     + + L + M+K N   + ++Y+ +L+G+  +G
Sbjct: 348 TMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFG 407

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K   A  +F  +   G ++D     ++++GLC     ++ LL+DA  +  KM +     +
Sbjct: 408 KFNDARELFSCLPSKGIQIDVVAYTTMIKGLC-----KEGLLDDAEDLLMKMEENGCPPN 462

Query: 370 PGTYGIVIRTL 380
             TY +++R L
Sbjct: 463 EFTYNVLVRGL 473



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 36/274 (13%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V  +N ++    +L++   AVK F      GL PN  T+S +I  +C   +  +A
Sbjct: 248 GVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKA 307

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-------------------VLD- 179
             V+D M +NG + +V T++ L+   CK+GR + A+E                   +LD 
Sbjct: 308 IFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDG 367

Query: 180 ---------------QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
                          +M ++  + NI TYN +L G+C  G+  +A E+   + + G++ D
Sbjct: 368 LFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQID 427

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V  YT ++ G CK G  ++A +LL +  E G  PN  T+N L  G  +     +    L 
Sbjct: 428 VVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLM 487

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           LMK +    D  + + LL       K   A+ +F
Sbjct: 488 LMKGKGLSADATT-TELLISYFSANKENSALQVF 520



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 6/267 (2%)

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  ++ +  + G+KPDV+T T V++  C +  +     +L    + GV P VVTF TL N
Sbjct: 26  AISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLIN 85

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G C EG           ++      +  ++ T++NGL K G    A+S  +++     E 
Sbjct: 86  GLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKI-----EG 140

Query: 329 DERMMNSLLR-GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
             R  + L+     M S  +  +L  A   F  MT K    D   Y  +I  L    + +
Sbjct: 141 RNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWN 200

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA   L + +  G +P   TFN ++   C EGKI +A  ++  M      P   +Y+ +I
Sbjct: 201 EATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVI 260

Query: 448 TKLDQLEKSYDACALYGAALKQGVIPQ 474
           +    L +  DA  ++   + +G++P 
Sbjct: 261 SGHCLLSQMNDAVKVFELMIHKGLLPN 287



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 36/222 (16%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFF------------- 108
           K   + + I + D +  +G N  V  ++ L+         E A++ F             
Sbjct: 300 KTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQ 359

Query: 109 ---------------SEASSY-------GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
                          SEA S         L  N  T++I++   C+   F +AR++  C+
Sbjct: 360 TCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCL 419

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
              G   +V  +T ++  LCK G L +A ++L +M   GC PN  TYN L++GL     +
Sbjct: 420 PSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDI 479

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
             + + LM +K  GL  D  T T ++  +    + N A+++ 
Sbjct: 480 SRSTKYLMLMKGKGLSADA-TTTELLISYFSANKENSALQVF 520


>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 184/358 (51%), Gaps = 9/358 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+  TF+++I  YC + +  +A  +++  F  G+ P+V T T +V  LCK+GR+ E +EV
Sbjct: 145 PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEV 204

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L+++  +G   ++  YN L+KG C +G+ +  + +L +++  G  P+V TY  +  G+C 
Sbjct: 205 LERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCD 264

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK-RNCLPDKI 296
            G  + A++L N+    G+  N +T++TL  G C  G    G  +L+LM++ R     +I
Sbjct: 265 SGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRI 324

Query: 297 S-YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           S Y++++ GL K  +   A+    +M +      +R +  L  G C      +  + DA 
Sbjct: 325 SPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRIL--GFC-----NEGSIGDAK 377

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           +V+++M K+  V     Y  +I    +     EA   ++  ++ G+ P   TFN +I A 
Sbjct: 378 RVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAF 437

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           CG+GK+  AL L+  M     +P   SY  ++  L        A  L+   +++ ++P
Sbjct: 438 CGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILP 495



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 196/415 (47%), Gaps = 15/415 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY-GLAPNS 120
           +A  +++ I + D I K G N S+  FN +L  LV   + + A +F+ +     G++ + 
Sbjct: 23  RARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVK-EDIDLAREFYRKKMMMNGVSGDD 81

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +TF I+++  C  N   +A K++  M   G  PN   +  ++++LCK+G++  A  ++++
Sbjct: 82  YTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNE 141

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M     +P+  T+N L+   C    + +A  +L    + G  PDV T T V+   CK GR
Sbjct: 142 M----VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGR 197

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             E +E+L      G   +VV +NTL  G+C  G    G  +LK M+ + CLP+  +Y+ 
Sbjct: 198 VTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNI 257

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L +G    G +  A+ +F +M   G   +    ++L+RGLC         +ED +++ E 
Sbjct: 258 LASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLC-----SGGRMEDGFKILEL 312

Query: 361 M--TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           M  ++  +      Y  +I  L K  + +EAL  L    ++   PR +  +  I   C E
Sbjct: 313 MEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKL--FPRAVDRSLRILGFCNE 370

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G I  A  +   M +   +PS   Y  LI    Q     +A  L    +  G  P
Sbjct: 371 GSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFP 425



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 150/340 (44%), Gaps = 37/340 (10%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  + A + V  + KA  + E +++ + ++  G    V  +N L+    ML + +   + 
Sbjct: 180 PDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRV 239

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
             +    G  PN  T++I+   YC+      A  + + M  +G + N  T+  L+  LC 
Sbjct: 240 LKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCS 299

Query: 168 SGRLKEALEVLDQM--GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN------- 218
            GR+++  ++L+ M   R G    I  YN ++ GL    + EEA E L  ++        
Sbjct: 300 GGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVD 359

Query: 219 --------------------------DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
                                     +G  P V  Y  ++ GFC+ G   EA EL+NE +
Sbjct: 360 RSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMV 419

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           + G  P   TFN L + +C +G     + L++ M  R CLPD  SYS +++ L   G  +
Sbjct: 420 DHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQ 479

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLL 351
            AV +F +MV      D    NS+L  L  ++ W E D L
Sbjct: 480 KAVRLFLQMVEKDILPDYSTWNSMLLCLTQETVWLEGDNL 519



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 153/327 (46%), Gaps = 19/327 (5%)

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           SS G  P+   F  ++R         +  KV+D +   G +P++  F  +++ L     +
Sbjct: 3   SSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVL-----V 57

Query: 172 KEALEVLDQMGRI-----GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           KE +++  +  R      G   +  T+  L+KGLC   R+ +A+++L  +K+ G  P+  
Sbjct: 58  KEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTV 117

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            Y  ++   CK G+   A  L+NE +E    P+ VTFN L + YC+E   ++ + LL+  
Sbjct: 118 IYNTMIHALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKS 173

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
                +PD ++ + ++  L K G++   V + + +   G  VD    N+L++G CM    
Sbjct: 174 FSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKA 233

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
           +       ++V + M  K  + +  TY I+          D A+   +     G     +
Sbjct: 234 KV-----GHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFM 288

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYE 433
           T++ +I+ LC  G+++    +L LM E
Sbjct: 289 TYDTLIRGLCSGGRMEDGFKILELMEE 315



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 136/296 (45%), Gaps = 42/296 (14%)

Query: 66  LKERIDIFDSIKKDGTNWS-------------------------------------VSDF 88
           L   ID+F+ +K DG NW+                                     +S +
Sbjct: 268 LDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPY 327

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N ++  L   N+ E A++F ++     L P +   S+ I  +CN+    +A++V D M  
Sbjct: 328 NSIIYGLYKKNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIK 385

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G  P+V  +  L++  C+ G ++EA E++++M   G  P   T+N L+   C  G+V  
Sbjct: 386 EGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGS 445

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A +++ ++   G  PD+ +Y+ ++D  C  G   +A+ L  + +E+ + P+  T+N++  
Sbjct: 446 ALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLL 505

Query: 269 GYCKEGTPMKGVGLLKLM--KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
              +E   ++G  L  L   ++R C   K +   +L  +     +R  + IF+ ++
Sbjct: 506 CLTQETVWLEGDNLFHLTAYRERLCYKKKKAGFNVL-AIYHMSTMRKKIWIFQSLL 560



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD+  + T++ GL +   +R  + +   + +FG     ++ NS+L  L     E+ DL  
Sbjct: 9   PDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVK---EDIDLAR 65

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           + Y+  +KM       D  T+GI+++ L    +  +A   L      G  P T+ +N +I
Sbjct: 66  EFYR--KKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMI 123

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            ALC  GK+ +A  L+  M E    PS  ++++LI+   Q E    A  L   +   G +
Sbjct: 124 HALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFV 179

Query: 473 P 473
           P
Sbjct: 180 P 180


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 202/421 (47%), Gaps = 6/421 (1%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           AQ  +   +A  L+  + +   ++KDG    +S  N  +  LV+    + A++F      
Sbjct: 166 AQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRR 225

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
            G+ P+ +T++ +I+  C      +A ++I  M  NG  P+  ++  +++ LCK  R++E
Sbjct: 226 VGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEE 285

Query: 174 ALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
              +L +M    G  P+  TYN L+ GL   G  +EA E L   +    + D   Y+A++
Sbjct: 286 VRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIV 345

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
             FC  GR  EA E++ E I +G  P+VVT++T+ +G+C+ G   +   ++K M K +C 
Sbjct: 346 HSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCK 405

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+ ++++ LLNGL K GK   A  +  +      E +    + +   + M  +  +  L+
Sbjct: 406 PNTVTHTALLNGLCKVGKTSEAWELLNKS-----EEEWWTPSDITYSVVMHGFRREGKLK 460

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           ++  V  +M +K          ++I  L K +K  EA   +      G     + F  VI
Sbjct: 461 ESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVI 520

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
                +G ++ AL L+  MY   + P   +Y +++  L +  +  +A  L    L +GV+
Sbjct: 521 HGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVL 580

Query: 473 P 473
           P
Sbjct: 581 P 581



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 176/374 (47%), Gaps = 11/374 (2%)

Query: 104 AVKFFSEASS---YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           A +FF  A     Y  AP    F  M+    N      AR+V+  M   G       F  
Sbjct: 110 AFEFFRWADRQWRYRHAPE--VFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQ 167

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+ S  ++G+L+ A+ VL  M + GC P+I   N  +  L   GRV++A E    ++  G
Sbjct: 168 LMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVG 227

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           ++PDVYTY  ++ G C   R  +AME++   ++ G  P+ +++ T+ +  CKE    +  
Sbjct: 228 VEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVR 287

Query: 281 GLLKLMKKRNCL-PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           GLL+ M+    L PD+++Y+ L++GL K G    A+   +E     F VDE   ++++  
Sbjct: 288 GLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHS 347

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
            C+        + +A ++  +M  K    D  TY  V+    +  + D+A   + H  + 
Sbjct: 348 FCLNG-----RMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKN 402

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
              P T+T   ++  LC  GK  +A  LL    E    PS  +Y +++    +  K  ++
Sbjct: 403 DCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKES 462

Query: 460 CALYGAALKQGVIP 473
           C +    L++G  P
Sbjct: 463 CDVVVQMLQKGFFP 476



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 177/361 (49%), Gaps = 9/361 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L      + A++F  E+       +   +S ++  +C      EA++++  M 
Sbjct: 306 YNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMI 365

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V T++ +V+  C+ G L +A +++  M +  CKPN  T+  LL GLC VG+  
Sbjct: 366 SKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTS 425

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA+E+L   + +   P   TY+ VM GF + G+  E+ +++ + +++G  P  V  N L 
Sbjct: 426 EAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLI 485

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +  CK+  P +    ++  + + C  + ++++T+++G  + G +  A+S+  +M      
Sbjct: 486 HALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMY----- 540

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI-RTLGKGKKT 386
           +  R  + +   + + +  +K  L++A  + EKM  +  +  P TY  VI R   KG   
Sbjct: 541 LSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLE 600

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D   +       +        +N V++ LC  GK+++A  LL+ +   A +    +  +L
Sbjct: 601 DLLNLLEKM---LARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHIL 657

Query: 447 I 447
           +
Sbjct: 658 M 658



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 149/365 (40%), Gaps = 79/365 (21%)

Query: 77  KKDGTNWSVSD--FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           + +G  + V +  ++ ++ +  +      A +   E  S G  P+  T+S ++  +C   
Sbjct: 328 ESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIG 387

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK--------------------------- 167
           +  +ARK++  M+ N   PN  T T L+N LCK                           
Sbjct: 388 ELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYS 447

Query: 168 --------SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
                    G+LKE+ +V+ QM + G  P     N L+  LC   +  EA + +   ++ 
Sbjct: 448 VVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSK 507

Query: 220 GLKPDVYTYTAVMDGFC-----------------------------------KVGRSNEA 244
           G   +V  +T V+ GF                                    K GR  EA
Sbjct: 508 GCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEA 567

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L+ + + RGV P  VT+ T+ + YC++G     + LL+ M  R  +  K +Y+ ++  
Sbjct: 568 TGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEM--KSAYNQVVEK 625

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L  +GK+  A S+  +++R     D +  + L     M+S+  + L   AY V  +M ++
Sbjct: 626 LCAFGKLNEAYSLLYKILRTASVRDAQTCHIL-----MESFLNRGLGLQAYNVACRMFRR 680

Query: 365 VSVTD 369
             + D
Sbjct: 681 NLIPD 685



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 4/234 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   LKE  D+   + + G   +  + N L+ AL    +   A  F  +  S G   N  
Sbjct: 455 REGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVV 514

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  +  + D   A  ++D M+ +  HP+V T+T++V++L K GRLKEA  ++++M
Sbjct: 515 NFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKM 574

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGR 240
              G  P   TY  ++   C  G +E+   +L   +    +K     Y  V++  C  G+
Sbjct: 575 LNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKS---AYNQVVEKLCAFGK 631

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            NEA  LL + +      +  T + L   +   G  ++   +   M +RN +PD
Sbjct: 632 LNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPD 685


>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
          Length = 726

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 202/421 (47%), Gaps = 6/421 (1%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           AQ  +   +A  L+  + +   ++KDG    +S  N  +  LV+    + A++F      
Sbjct: 166 AQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRR 225

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
            G+ P+ +T++ +I+  C      +A ++I  M  NG  P+  ++  +++ LCK  R++E
Sbjct: 226 VGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEE 285

Query: 174 ALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
              +L +M    G  P+  TYN L+ GL   G  +EA E L   +    + D   Y+A++
Sbjct: 286 VRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIV 345

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
             FC  GR  EA E++ E I +G  P+VVT++T+ +G+C+ G   +   ++K M K +C 
Sbjct: 346 HSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCK 405

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+ ++++ LLNGL K GK   A  +  +      E +    + +   + M  +  +  L+
Sbjct: 406 PNTVTHTALLNGLCKVGKTSEAWELLNKS-----EEEWWTPSDITYSVVMHGFRREGKLK 460

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           ++  V  +M +K          ++I  L K +K  EA   +      G     + F  VI
Sbjct: 461 ESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVI 520

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
                +G ++ AL L+  MY   + P   +Y +++  L +  +  +A  L    L +GV+
Sbjct: 521 HGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVL 580

Query: 473 P 473
           P
Sbjct: 581 P 581



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 176/374 (47%), Gaps = 11/374 (2%)

Query: 104 AVKFFSEASS---YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           A +FF  A     Y  AP    F  M+    N      AR+V+  M   G       F  
Sbjct: 110 AFEFFRWADRQWRYRHAPE--VFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQ 167

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+ S  ++G+L+ A+ VL  M + GC P+I   N  +  L   GRV++A E    ++  G
Sbjct: 168 LMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVG 227

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           ++PDVYTY  ++ G C   R  +AME++   ++ G  P+ +++ T+ +  CKE    +  
Sbjct: 228 VEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVR 287

Query: 281 GLLKLMKKRNCL-PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           GLL+ M+    L PD+++Y+ L++GL K G    A+   +E     F VDE   ++++  
Sbjct: 288 GLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHS 347

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
            C+        + +A ++  +M  K    D  TY  V+    +  + D+A   + H  + 
Sbjct: 348 FCLNG-----RMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKN 402

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
              P T+T   ++  LC  GK  +A  LL    E    PS  +Y +++    +  K  ++
Sbjct: 403 DCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKES 462

Query: 460 CALYGAALKQGVIP 473
           C +    L++G  P
Sbjct: 463 CDVVVQMLQKGFFP 476



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 177/361 (49%), Gaps = 9/361 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L      + A++F  E+       +   +S ++  +C      EA++++  M 
Sbjct: 306 YNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMI 365

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V T++ +V+  C+ G L +A +++  M +  CKPN  T+  LL GLC VG+  
Sbjct: 366 SKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTS 425

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA+E+L   + +   P   TY+ VM GF + G+  E+ +++ + +++G  P  V  N L 
Sbjct: 426 EAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLI 485

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +  CK+  P +    ++  + + C  + ++++T+++G  + G +  A+S+  +M      
Sbjct: 486 HALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMY----- 540

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI-RTLGKGKKT 386
           +  R  + +   + + +  +K  L++A  + EKM  +  +  P TY  VI R   KG   
Sbjct: 541 LSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLE 600

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D   +       +        +N V++ LC  GK+++A  LL+ +   A +    +  +L
Sbjct: 601 DLLNLLEKM---LARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHIL 657

Query: 447 I 447
           +
Sbjct: 658 M 658



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 149/365 (40%), Gaps = 79/365 (21%)

Query: 77  KKDGTNWSVSD--FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
           + +G  + V +  ++ ++ +  +      A +   E  S G  P+  T+S ++  +C   
Sbjct: 328 ESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIG 387

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK--------------------------- 167
           +  +ARK++  M+ N   PN  T T L+N LCK                           
Sbjct: 388 ELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYS 447

Query: 168 --------SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
                    G+LKE+ +V+ QM + G  P     N L+  LC   +  EA + +   ++ 
Sbjct: 448 VVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSK 507

Query: 220 GLKPDVYTYTAVMDGFC-----------------------------------KVGRSNEA 244
           G   +V  +T V+ GF                                    K GR  EA
Sbjct: 508 GCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEA 567

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L+ + + RGV P  VT+ T+ + YC++G     + LL+ M  R  +  K +Y+ ++  
Sbjct: 568 TGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEM--KSAYNQVVEK 625

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L  +GK+  A S+  +++R     D +  + L     M+S+  + L   AY V  +M ++
Sbjct: 626 LCAFGKLNEAYSLLYKILRTASVRDAQTCHIL-----MESFLNRGLGLQAYNVACRMFRR 680

Query: 365 VSVTD 369
             + D
Sbjct: 681 NLIPD 685



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 4/234 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   LKE  D+   + + G   +  + N L+ AL    +   A  F  +  S G   N  
Sbjct: 455 REGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVV 514

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  +  + D   A  ++D M+ +  HP+V T+T++V++L K GRLKEA  ++++M
Sbjct: 515 NFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKM 574

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGR 240
              G  P   TY  ++   C  G +E+   +L   +    +K     Y  V++  C  G+
Sbjct: 575 LNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKS---AYNQVVEKLCAFGK 631

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            NEA  LL + +      +  T + L   +   G  ++   +   M +RN +PD
Sbjct: 632 LNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPD 685


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 191/374 (51%), Gaps = 15/374 (4%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH--PNVTTFT 159
           E A   F E    G+ P+ ++++I++   C++N   EA +++  M D+G    P+V +++
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            ++N   K G L +   +LDQ  RI   PN+ TYN ++  LC    V++A E+L  +   
Sbjct: 93  TVINGFFKEGDLDK---MLDQ--RI--SPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G+ PD  TY +++ GFC  G+  EA+  L +    GV P+VVT+N+L +  CK G   + 
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             +   M KR   PD  +Y TLL G    G +     +   MVR G   +  + + L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV-- 263

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
            C  + +EK  +E+A  VF KM ++    +  TYG VI  L K  + ++A+++    I+ 
Sbjct: 264 -CAYAKQEK--VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE 320

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P +I +N++I +LC   K +KA  L   M +     S   ++ +I    +  +  ++
Sbjct: 321 GLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIES 380

Query: 460 CALYGAALKQGVIP 473
             L+   ++ GV P
Sbjct: 381 GKLFDLMVRIGVKP 394



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 185/365 (50%), Gaps = 21/365 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG--LAPNSWTFSIMIRC 129
           +FD + + G    V  +N LL  L   N  + A++     +  G    P+  ++S +I  
Sbjct: 39  VFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +  + D       +D M D    PNV T+  ++ +LCK+  + +A+EVL  M + G  P+
Sbjct: 98  FFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN ++ G C  G+ +EA   L  +++DG++PDV TY ++MD  CK GR  EA ++ +
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 210

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
              +RG+ P++ T+ TL  GY  +G  ++  GLL LM +    P+   +S L+    K  
Sbjct: 211 SMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 270

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K+  A+ +F +M + G   +     +++  LC     +   +EDA   FE+M  +    D
Sbjct: 271 KVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLC-----KSGRVEDAMLYFEQMIDEGLRPD 325

Query: 370 PGTYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
              Y  +I +L    K +K +E  + +   ++ G    TI FN++I + C EG++ ++  
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEM---LDRGICLSTIFFNSIIDSHCKEGRVIESGK 382

Query: 427 LLFLM 431
           L  LM
Sbjct: 383 LFDLM 387



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 178/398 (44%), Gaps = 32/398 (8%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     ++ DG    V  +N L+  L        A K F   +  GL P+  T+  +
Sbjct: 168 KEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTL 227

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG HPN   F+ILV +  K  +++EA+ V  +M + G 
Sbjct: 228 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL 287

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN  TY  ++  LC  GRVE+A      + ++GL+PD   Y +++   C   +  +A E
Sbjct: 288 NPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEE 347

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L  E ++RG+  + + FN++ + +CKEG  ++   L  LM +    PD I+    L    
Sbjct: 348 LFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFL---- 403

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             G  R   S+F  +    + +   M N+          +EK   E         T   S
Sbjct: 404 --GSARRDYSLFVNI----YFIFTNMSNT--------GDKEK---ETPVNTNGGNTASNS 446

Query: 367 VTDP--GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              P  GTY I++  L K K TD+AL    +   M       TFN +I AL   G+ D+A
Sbjct: 447 SGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 506

Query: 425 LLLLFLMYEHAKIPSRTSYDM---------LITKLDQL 453
             L      +  +P+  +Y +         L+ +LDQL
Sbjct: 507 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 544



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 126/309 (40%), Gaps = 33/309 (10%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E + +F  +++ G N +   +  ++  L      E A+ +F +    GL P+S 
Sbjct: 268 KQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSI 327

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C  + + +A ++   M D G   +   F  +++S CK GR+ E+ ++ D M
Sbjct: 328 VYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV-------KNDGLK------------ 222
            RIG KP+I T    L      G     Y + +N+        N G K            
Sbjct: 388 VRIGVKPDIITLGRFL------GSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGN 441

Query: 223 --------PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
                   P + TY  ++ G CK   +++A+ +        +     TFN + +   K G
Sbjct: 442 TASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVG 501

Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
              +   L         +P+  +Y  +   ++  G +     +F  M   G  VD  M+N
Sbjct: 502 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 561

Query: 335 SLLRGLCMK 343
            ++R L  +
Sbjct: 562 FIVRELLQR 570



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 126/289 (43%), Gaps = 22/289 (7%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP ++     +D + K+  +++ +  F+ +  +G       +N L+ +L + ++ E A +
Sbjct: 288 NPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEE 347

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT--------- 157
            F E    G+  ++  F+ +I  +C +    E+ K+ D M   G  P++ T         
Sbjct: 348 LFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSAR 407

Query: 158 --FTILVN------SLCKSGRLKEALEVLDQMGRIGCK----PNIQTYNCLLKGLCYVGR 205
             +++ VN      ++  +G  ++   V    G         P + TYN +L GLC    
Sbjct: 408 RDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKL 467

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            ++A  M  N+    LK +  T+  ++D   KVGR++EA +L       G+ PN  T+  
Sbjct: 468 TDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 527

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           +      +G   +   L   M+   C  D    + ++  LL+ G+I  A
Sbjct: 528 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 576



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 1/158 (0%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P + T+ I+++ LCK+    +AL +   +  +  K   +T+N ++  L  VGR +EA ++
Sbjct: 450 PFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 509

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
            +   ++GL P+ +TY  + +     G   E  +L     + G T +    N +     +
Sbjct: 510 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 569

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            G   +    L ++ +++    + S ++L   LL  GK
Sbjct: 570 RGEITRAGTYLSMIDEKH-FSLEASTASLFIDLLSGGK 606


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 201/414 (48%), Gaps = 22/414 (5%)

Query: 60  RIKASPLKERIDIFDSIK--KDGTNWSV------SDFNDLLMALVMLNEQETAVKFFSEA 111
           R++A+P+ E   +  ++   +D  ++++          DL  AL +L +        S  
Sbjct: 54  RLRAAPVTEACSLLSALPDVRDAVSYNIVLAALCRRGGDLRQALSLLAD-------MSRE 106

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           +     PN+ ++++++R  C      EA  ++  M  +G   +V T+  L+  LC +  L
Sbjct: 107 AHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAEL 166

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
             ALE+L +M   G  PN+  Y+CLL+G C  GR ++  ++   +   G++PDV  +T  
Sbjct: 167 DGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGF 226

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           +D  CK GR  +A+++ +  ++RG+ PNVVT+N L N  CKEG+  + + L   M  +  
Sbjct: 227 IDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGV 286

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG--FEVDERMMNSLLRGLCMKSWEEKD 349
            PD ++Y+TL+ GL    ++  A+ + +EM++     E D    NS++ GLC     +  
Sbjct: 287 APDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLC-----KIG 341

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            +  A  V E M ++  + +  TY  +I    +  K + A+  +   I  G  P + T++
Sbjct: 342 RMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYS 401

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            +I       ++D+A + L  M +         Y  L+  L QL     A  L+
Sbjct: 402 ILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLF 455



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 179/406 (44%), Gaps = 43/406 (10%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A+ L   +++   +   G + +V  ++ LL         +   K F E S  G+ P+   
Sbjct: 163 AAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIM 222

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           F+  I   C K    +A KV D M   G  PNV T+ +L+N LCK G ++EAL + ++M 
Sbjct: 223 FTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMD 282

Query: 183 RIGCKPNIQTYNCLLKGL-------------------------------------CYVGR 205
             G  P++ TYN L+ GL                                     C +GR
Sbjct: 283 DKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGR 342

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           + +A  +   +   G   ++ TY  ++ GF +V + N AM L++E I  G+ P+  T++ 
Sbjct: 343 MRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSI 402

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L NG+ K     +    L+ M +R    +   Y  LL  L + G +  A+ +F EM    
Sbjct: 403 LINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM-DMN 461

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
             +D    ++++ G C KS +    ++ A Q+ + M  +    D  TY I+I    K   
Sbjct: 462 CGLDAVAYSTMMYGAC-KSGD----IKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGD 516

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            +EA   L      G +P    F+++I+    EG+I+K L L+  M
Sbjct: 517 LEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEM 562



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 161/326 (49%), Gaps = 11/326 (3%)

Query: 154 NVTTFTILVNSLCK-SGRLKEALEVLDQMGR---IGCKPNIQTYNCLLKGLCYVGRVEEA 209
           +  ++ I++ +LC+  G L++AL +L  M R      +PN  +Y  +++GLC   R +EA
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             +L +++  G++ DV TY  ++ G C     + A+ELL E    GV PNV+ ++ L  G
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           YC+ G       + + M +    PD I ++  ++ L K G+I  AV +   MV+ G E +
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N L+  LC     ++  + +A  +  +M  K    D  TY  +I  L    + D A
Sbjct: 255 VVTYNVLINCLC-----KEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGA 309

Query: 390 LIHLHHAIEMGHI--PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +  L   I+   +  P  +TFN+VI  LC  G++ +A+ +  +M E   + +  +Y+ LI
Sbjct: 310 MGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLI 369

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
               ++ K   A  L    +  G+ P
Sbjct: 370 GGFLRVHKVNMAMNLMSELISSGLEP 395



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 124/241 (51%), Gaps = 1/241 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +++ I + + + + G   ++  +N L+   + +++   A+   SE  S GL P+S+
Sbjct: 339 KIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSF 398

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+I  +    +   A   +  M   G    +  +  L+ +LC+ G +++A+ + ++M
Sbjct: 399 TYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM 458

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             + C  +   Y+ ++ G C  G ++ A ++L ++ ++GL PD  TY+ +++ F K+G  
Sbjct: 459 D-MNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDL 517

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  +L +    G  P+V  F++L  GY  EG   K + L+  M+ +N   D     TL
Sbjct: 518 EEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDPKFICTL 577

Query: 302 L 302
           +
Sbjct: 578 V 578



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 1/254 (0%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  FN ++  L  +     A+      +  G   N  T++ +I  +   +    A  ++ 
Sbjct: 327 VVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMS 386

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +  +G  P+  T++IL+N   K   +  A   L  M + G +  +  Y  LL  LC +G
Sbjct: 387 ELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLG 446

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
            +E+A  +L N  +     D   Y+ +M G CK G    A +LL + ++ G+ P+ VT++
Sbjct: 447 MMEQAM-VLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYS 505

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L N + K G   +   +LK M     +PD   + +L+ G    G+I   + +  EM   
Sbjct: 506 ILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAK 565

Query: 325 GFEVDERMMNSLLR 338
              +D + + +L+R
Sbjct: 566 NVAIDPKFICTLVR 579



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 14/180 (7%)

Query: 299 STLLNGLLKWGKIRPAVSIFKEM--VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           + LLN  L+   +  A S+   +  VR     D    N +L  LC +  +    L  A  
Sbjct: 48  AALLNRRLRAAPVTEACSLLSALPDVR-----DAVSYNIVLAALCRRGGD----LRQALS 98

Query: 357 VFEKMTKKV---SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           +   M+++    +  +  +Y +V+R L   ++TDEA+  L      G     +T+  +I+
Sbjct: 99  LLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIR 158

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            LC   ++D AL LL  M      P+   Y  L+    +  +  D   ++    + GV P
Sbjct: 159 GLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEP 218


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 179/368 (48%), Gaps = 6/368 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I + +K          F+ L+ A       E AV+ F +   +G  P+ +T++ ++    
Sbjct: 118 ILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMV 177

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            K  F  A  V + M    Y+PN  TF IL+N LCK+G+  +AL++ D+M + G  PN  
Sbjct: 178 QKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTM 237

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            Y  +L GLC   R ++ + +L  +K  G  PD  T  A++DGFCK+G+ +EA  LL   
Sbjct: 238 IYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLF 297

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            + G    +  +++L +G  +     +     + M K    PD + Y+ L+ G  + G +
Sbjct: 298 EKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMV 357

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+++  +M + G   D    N+L++G C     +  LL+ A  +  +++K        
Sbjct: 358 DYALNMLNDMTQRGLSPDTYCYNALIKGFC-----DVGLLDKARSLQLEISKNDCFPTSC 412

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY I+I  + +    DEA    +    +G  P  +TFN +I  LC  G++++A  L + M
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472

Query: 432 YEHAKIPS 439
            E  K PS
Sbjct: 473 -EIGKNPS 479



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 199/460 (43%), Gaps = 53/460 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+   ++ ++ F  +K  G    V  +N +L  +V       A+  +++       PN  
Sbjct: 143 KSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRA 202

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF I++   C      +A K+ D M   G  PN   +TI+++ LC++ R  +   +L+ M
Sbjct: 203 TFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM 262

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--------------------- 220
              GC P+  T N LL G C +G+++EA+ +L   + +G                     
Sbjct: 263 KVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRY 322

Query: 221 --------------LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                         ++PDV  YT ++ GFC+VG  + A+ +LN+  +RG++P+   +N L
Sbjct: 323 DEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNAL 382

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             G+C  G   K   L   + K +C P   +Y+ L+ G+ + G +  A  IF +M   G 
Sbjct: 383 IKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGC 442

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT--KKVS-----------VTDPGTY 373
                  N+L+ GLC K+ E    LE+A  +F KM   K  S           V D  + 
Sbjct: 443 SPSIMTFNALIDGLC-KAGE----LEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASL 497

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             ++  L +     +A   L    + G +P  +T+N +I   C    I+ A  L   +  
Sbjct: 498 QTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQL 557

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               P   +Y  LI    ++++  DA  +    +K G  P
Sbjct: 558 KGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTP 597



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 168/334 (50%), Gaps = 16/334 (4%)

Query: 120 SW-TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           SW T +++I      + F    K+++ + ++       TF++L+ +  KSG  ++A+E  
Sbjct: 95  SWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESF 154

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK----PDVYTYTAVMDG 234
            +M   GCKP++ TYN +L    +V   +E + + + V N  LK    P+  T+  +++G
Sbjct: 155 GKMKDFGCKPDVFTYNSIL----HVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNG 210

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK G++++A+++ +E  ++G+ PN + +  + +G C+         LL  MK   C PD
Sbjct: 211 LCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPD 270

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLED 353
            I+ + LL+G  K G+I  A ++ +   + G+ +  +  +SL+ GL   K ++E      
Sbjct: 271 SITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDE------ 324

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
             +   KM K     D   Y I+IR   +    D AL  L+   + G  P T  +N +I+
Sbjct: 325 VQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIK 384

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             C  G +DKA  L   + ++   P+  +Y +LI
Sbjct: 385 GFCDVGLLDKARSLQLEISKNDCFPTSCTYTILI 418



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 169/380 (44%), Gaps = 41/380 (10%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV------ 155
           + A + F++  + G +P+  TF+ +I   C   +  EAR +   M + G +P++      
Sbjct: 428 DEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQ 486

Query: 156 --------TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                    +   +V  LC+SG + +A ++L Q+   G  P+I TYN L+ G C    + 
Sbjct: 487 GADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNIN 546

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A+++   ++  G  PD  TY  ++DGF +V R  +A  +L++ ++ G TP+   +  L 
Sbjct: 547 GAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLM 606

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS-TLLNGLLKWGKIRPAVSIFKEMVRF-- 324
              C++G     V     +K    LP +   +  L     + G++  AV    EM  F  
Sbjct: 607 TWSCRKGK--LSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEM-NFKL 663

Query: 325 -GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
             FE+    +   L GLC          E+A ++F  + +     +P +  ++I  L K 
Sbjct: 664 NNFEIAPYTI--WLIGLCQARRS-----EEALKIFLVLKECQMDVNPPSCVMLINGLCKD 716

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM---------YEH 434
              + A+    + +E G +      N ++++L  + K+  AL LL  M         Y H
Sbjct: 717 GNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLH 776

Query: 435 AKIPSRTSYDMLITKLDQLE 454
            +I    SY + + K  ++E
Sbjct: 777 HRI---KSYLLSVWKAQEME 793



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 147/352 (41%), Gaps = 29/352 (8%)

Query: 23  IPQFNKLV--VFAAASLSTAESL----DLKENPR-----SLQAQRFVDRIKASPLKERI- 70
           I  FN L+  +  A  L  A  L    ++ +NP      S  A R +D      + ER+ 
Sbjct: 446 IMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLC 505

Query: 71  ---------DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
                     +   +   G    +  +N L+           A K F E    G +P+S 
Sbjct: 506 ESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSV 565

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I  +   +   +A +V+D M  NG  P+   +  L+   C+ G+L  A  +  + 
Sbjct: 566 TYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKY 625

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML--MNVKNDGLKPDVYTYTAVMDGFCKVG 239
            R       +T   L +     G +E+A   L  MN K +    ++  YT  + G C+  
Sbjct: 626 LRSLPSQEDETLK-LAEEHFEKGELEKAVRCLLEMNFKLNNF--EIAPYTIWLIGLCQAR 682

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL-LKLMKKRNCLPDKISY 298
           RS EA+++     E  +  N  +   L NG CK+G     V + L  ++K   L  +I  
Sbjct: 683 RSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRIC- 741

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           + LL  L+   K++ A+ +   M   G+++DE + +  ++   +  W+ +++
Sbjct: 742 NQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHR-IKSYLLSVWKAQEM 792



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 5/191 (2%)

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +L+ +K  N      ++S L+    K G    AV  F +M  FG + D    NS+L  + 
Sbjct: 118 ILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMV 177

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                +K++   A  V+ +M K     +  T+ I++  L K  KTD+AL       + G 
Sbjct: 178 -----QKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGI 232

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P T+ +  ++  LC   + D    LL  M      P   + + L+    +L +  +A A
Sbjct: 233 PPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFA 292

Query: 462 LYGAALKQGVI 472
           L     K+G +
Sbjct: 293 LLQLFEKEGYV 303



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 29/132 (21%), Positives = 57/132 (43%)

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
           + ++ +  + E A + F KM       D  TY  ++  + + +    AL   +  +++ +
Sbjct: 138 IAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNY 197

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P   TF  ++  LC  GK D AL +   M +    P+   Y ++++ L Q +++ D   
Sbjct: 198 NPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHR 257

Query: 462 LYGAALKQGVIP 473
           L       G  P
Sbjct: 258 LLNTMKVSGCCP 269


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 199/412 (48%), Gaps = 31/412 (7%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ + + K+G   +V  +N L+   V   + E   +     S  G++ N  T ++++R 
Sbjct: 246 MEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRG 305

Query: 130 YCNKNDFFEARKVI-DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
           YC K    EA K++ +   D     +   + +LV+  C+ GR+++A+ + D+M R+G K 
Sbjct: 306 YCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKV 365

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           N+   N L+KG C +G+V EA  + + + +  LKPD Y+Y  ++DG+C+ G+ ++A  L 
Sbjct: 366 NMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLC 425

Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
            E +  G+TP VVT+NT+  G    G+    + L  LM +R   P++IS  T+L+   K 
Sbjct: 426 EEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKM 485

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEE--------KDL--------- 350
           G    A+ ++KE++  GF       N+++ GLC M    E        K+L         
Sbjct: 486 GDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITY 545

Query: 351 ------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
                       +++A+Q+   M ++        Y  +I  L K +K ++    L     
Sbjct: 546 RTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQT 605

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            G  P  +T+  +I   C E K+DKA  L F M E    P+      +++ L
Sbjct: 606 RGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSL 657



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 185/398 (46%), Gaps = 11/398 (2%)

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
           DG   +V  +N ++  LV +   + A+  +      G+ PN  +   M+ C+    D   
Sbjct: 431 DGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDR 490

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A  +   +   G+  +   F  +++ LCK G+L EA  V D+M  +G  P+  TY  L  
Sbjct: 491 AMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSD 550

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           G C  G V+EA+++   ++   +   +  Y +++DG  K+ + N+  +LL E   RG++P
Sbjct: 551 GYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSP 610

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           NVVT+ TL +G+C E    K   L   M +R   P+ +  S +++ L +  +I  A  I 
Sbjct: 611 NVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVIL 670

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV---SVTDPGTYGI 375
            +M+ F            +   C     + DL  +A ++ + + K     S+++   Y I
Sbjct: 671 DKMLDFDILA--------VHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNI 722

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
            I  L K  K DEA   L   +  G +P   T+  +I A    G +D+A  L   M E  
Sbjct: 723 AIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKG 782

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            IP+ T Y+ LI  L +L     A  L+    ++G++P
Sbjct: 783 LIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVP 820



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 177/381 (46%), Gaps = 6/381 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           K  + +FD + + G    +   + LL  LV   E   AV  F +    G+ P+ +  SI+
Sbjct: 173 KHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIV 232

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  +C       A +V++ M   G  PNV T+  LVN     G  +    VL  M   G 
Sbjct: 233 VNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGV 292

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKVGRSNEAM 245
             N+ T   L++G C  G+++EA ++L  V+ D  L  D   Y  ++DG+C++GR  +A+
Sbjct: 293 SRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAV 352

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + +E +  G+  N+V  NTL  GYCK G   +   +   M   N  PD  SY+TLL+G 
Sbjct: 353 RIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGY 412

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            + GK+  A  + +EM+  G        N++++GL      +    +DA  ++  M ++ 
Sbjct: 413 CREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLV-----DVGSYDDALHLWHLMVERG 467

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  +   ++    K   +D A++     +  G    T+ FN +I  LC  GK+ +A 
Sbjct: 468 VTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAG 527

Query: 426 LLLFLMYEHAKIPSRTSYDML 446
            +   M E    P   +Y  L
Sbjct: 528 AVFDRMKELGLSPDEITYRTL 548



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 179/366 (48%), Gaps = 12/366 (3%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           FS    +G    S  F ++++ +  +     A  V D M   G  P + + + L+  L +
Sbjct: 146 FSVYKEFGFC--SGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQ 203

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G  + A+ V DQ+   G  P++   + ++   C VGRV+ A E+L  +  +GL+P+V T
Sbjct: 204 KGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVT 263

Query: 228 YTAVMDGFCKVGRSN-EAME-LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           Y  +++G+  VGR + E +E +L    ERGV+ NVVT   L  GYCK+G   +   LL+ 
Sbjct: 264 YNGLVNGY--VGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLRE 321

Query: 286 MKKRNCL-PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
           +++   L  D+  Y  L++G  + G++  AV I  EM+R G +V+  + N+L++G C   
Sbjct: 322 VEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYC--- 378

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
             +   + +A +VF  M       D  +Y  ++    +  K  +A +     +  G  P 
Sbjct: 379 --KLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPT 436

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            +T+N VI+ L   G  D AL L  LM E    P+  S   ++    ++  S  A  L+ 
Sbjct: 437 VVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWK 496

Query: 465 AALKQG 470
             L +G
Sbjct: 497 EILGRG 502



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 186/389 (47%), Gaps = 10/389 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           F+ L+ A       + A+  F E S  G  P   + S ++     K +   A  V D + 
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V   +I+VN+ C+ GR+  A+EVL++M + G +PN+ TYN L+ G  YVGR +
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNG--YVGRGD 276

Query: 208 -EAYEMLMNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE-RGVTPNVVTFN 264
            E  E ++ + ++ G+  +V T T +M G+CK G+ +EA +LL E  E   +  +   + 
Sbjct: 277 FEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYG 336

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +GYC+ G     V +   M +     + +  +TL+ G  K G++  A  +F  MV +
Sbjct: 337 VLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDW 396

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             + D    N+LL G C +    K     A+ + E+M          TY  VI+ L    
Sbjct: 397 NLKPDCYSYNTLLDGYCREGKVSK-----AFMLCEEMLGDGITPTVVTYNTVIKGLVDVG 451

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
             D+AL   H  +E G  P  I+   ++      G  D+A++L   +       S  +++
Sbjct: 452 SYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFN 511

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            +I+ L ++ K  +A A++    + G+ P
Sbjct: 512 TMISGLCKMGKLMEAGAVFDRMKELGLSP 540



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 163/362 (45%), Gaps = 40/362 (11%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           + + + A+  + E    G   ++  F+ MI   C      EA  V D M + G  P+  T
Sbjct: 485 MGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEIT 544

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           +  L +  CK+G ++EA ++   M R     +I+ YN L+ GL  + ++ +  ++L+ ++
Sbjct: 545 YRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQ 604

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             GL P+V TY  ++ G+C   + ++A  L  E IERG TPNVV  + + +   ++    
Sbjct: 605 TRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRIS 664

Query: 278 KGVGLL-----------------KLMKKR------------------NCLPDKISYSTLL 302
           +   +L                 KL+K                    N L + I Y+  +
Sbjct: 665 EATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAI 724

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
           +GL K GK+  A S+   ++  GF  D     +L+   C  S      +++A+++ ++M 
Sbjct: 725 DGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHA-CSVSGN----VDEAFKLRDEML 779

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           +K  + +   Y  +I  L K    D A    +   + G +P  +T+N +I   C  G +D
Sbjct: 780 EKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLD 839

Query: 423 KA 424
           KA
Sbjct: 840 KA 841



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 35/300 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E   I   +++   + S+  +N L+  L  + +         E  + GL+PN  
Sbjct: 554 KNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVV 613

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I  +C++    +A  +   M + G+ PNV   + +V+SL +  R+ EA  +LD+M
Sbjct: 614 TYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKM 673

Query: 182 -------------------------GRIG--------CKP--NIQTYNCLLKGLCYVGRV 206
                                     +I         C    N   YN  + GLC  G++
Sbjct: 674 LDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKL 733

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA  +L  + + G  PD +TY  ++      G  +EA +L +E +E+G+ PN+  +N L
Sbjct: 734 DEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNAL 793

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            NG CK G   +   L   + ++  +P+ ++Y+ L+    + G +  A  + ++M   G 
Sbjct: 794 INGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGI 853



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 75/143 (52%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           N+  ++I I   C      EAR V+  +   G+ P+  T+  L+++   SG + EA ++ 
Sbjct: 716 NNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLR 775

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D+M   G  PNI  YN L+ GLC +G ++ A  +   +   GL P+  TY  ++  +C++
Sbjct: 776 DEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRI 835

Query: 239 GRSNEAMELLNEAIERGVTPNVV 261
           G  ++A  L  +  E G++  ++
Sbjct: 836 GDLDKASRLREKMTEEGISTRII 858



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)

Query: 26  FNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSV 85
            +K++ F   ++    S  L +N  +L+AQ+  D +  S      DI +S+  +      
Sbjct: 670 LDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKS------DICNSLSNNIV---- 719

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
             +N  +  L    + + A    S   S G  P+++T+  +I       +  EA K+ D 
Sbjct: 720 --YNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDE 777

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M + G  PN+T +  L+N LCK G +  A  +  ++ + G  PN  TYN L+   C +G 
Sbjct: 778 MLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGD 837

Query: 206 VEEAYEMLMNVKNDGLKPDV 225
           +++A  +   +  +G+   +
Sbjct: 838 LDKASRLREKMTEEGISTRI 857


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 179/368 (48%), Gaps = 6/368 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I + +K          F+ L+ A       E AV+ F +   +G  P+ +T++ ++    
Sbjct: 118 ILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMV 177

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            K  F  A  V + M    Y+PN  TF IL+N LCK+G+  +AL++ D+M + G  PN  
Sbjct: 178 QKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTM 237

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            Y  +L GLC   R ++ + +L  +K  G  PD  T  A++DGFCK+G+ +EA  LL   
Sbjct: 238 IYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLF 297

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            + G    +  +++L +G  +     +     + M K    PD + Y+ L+ G  + G +
Sbjct: 298 EKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMV 357

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+++  +M + G   D    N+L++G C     +  LL+ A  +  +++K        
Sbjct: 358 DYALNMLNDMTQRGLSPDTYCYNALIKGFC-----DVGLLDKARSLQLEISKNDCFPTSC 412

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY I+I  + +    DEA    +    +G  P  +TFN +I  LC  G++++A  L + M
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472

Query: 432 YEHAKIPS 439
            E  K PS
Sbjct: 473 -EIGKNPS 479



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 183/408 (44%), Gaps = 47/408 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+   ++ ++ F  +K  G    V  +N +L  +V       A+  +++       PN  
Sbjct: 143 KSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRA 202

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF I++   C      +A K+ D M   G  PN   +TI+++ LC++ R  +   +L+ M
Sbjct: 203 TFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM 262

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--------------------- 220
              GC P+  T N LL G C +G+++EA+ +L   + +G                     
Sbjct: 263 KVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRY 322

Query: 221 --------------LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                         ++PDV  YT ++ GFC+VG  + A+ +LN+  +RG++P+   +N L
Sbjct: 323 DEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNAL 382

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
             G+C  G   K   L   + K +C P   +Y+ L+ G+ + G +  A  IF +M   G 
Sbjct: 383 IKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGC 442

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT--KKVSVTDPGTYGI--VIRTLGK 382
                  N+L+ GLC K+ E    LE+A  +F KM   K  S+    + G   V+ T   
Sbjct: 443 SPSIMTFNALIDGLC-KAGE----LEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANG 497

Query: 383 GKKTD---EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
             + D   +A   L   ++ G  P +  +  ++   C +GK+  A  L
Sbjct: 498 FHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSL 545



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 168/334 (50%), Gaps = 16/334 (4%)

Query: 120 SW-TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           SW T +++I      + F    K+++ + ++       TF++L+ +  KSG  ++A+E  
Sbjct: 95  SWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESF 154

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK----PDVYTYTAVMDG 234
            +M   GCKP++ TYN +L    +V   +E + + + V N  LK    P+  T+  +++G
Sbjct: 155 GKMKDFGCKPDVFTYNSIL----HVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNG 210

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK G++++A+++ +E  ++G+ PN + +  + +G C+         LL  MK   C PD
Sbjct: 211 LCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPD 270

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLED 353
            I+ + LL+G  K G+I  A ++ +   + G+ +  +  +SL+ GL   K ++E      
Sbjct: 271 SITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDE------ 324

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
             +   KM K     D   Y I+IR   +    D AL  L+   + G  P T  +N +I+
Sbjct: 325 VQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIK 384

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             C  G +DKA  L   + ++   P+  +Y +LI
Sbjct: 385 GFCDVGLLDKARSLQLEISKNDCFPTSCTYTILI 418



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 138/342 (40%), Gaps = 76/342 (22%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G    V  +  L+     +   + A+   ++ +  GL+P+++ ++ +I+ +C+     
Sbjct: 334 KAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLD 393

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +AR +   +  N   P   T+TIL+  +C++G L EA ++ +QM  +GC P+I T+N L+
Sbjct: 394 KARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALI 453

Query: 198 KGLCYVGRVEEA----YEM------------------LMNVKN----------------- 218
            GLC  G +EEA    Y+M                  +M+  N                 
Sbjct: 454 DGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQ 513

Query: 219 ---DGLKPDVYTYTAVMDGFCKVGR------------------SNEAMELLNEAIERGVT 257
              +G  P    Y  +M   C+ G+                   +E ++L  E  E+G  
Sbjct: 514 MVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGEL 573

Query: 258 PNVV----------------TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
              V                 +     G C+     + + +  ++K+     +  S   L
Sbjct: 574 EKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVML 633

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           +NGL K G +  AV IF   +  GF +  R+ N LLR L ++
Sbjct: 634 INGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQ 675



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 7/248 (2%)

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+  V+D   K    +   ++L E     +     TF+ L   Y K G   K V     M
Sbjct: 98  THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           K   C PD  +Y+++L+ +++      A++++ +M++  +  +      LL GLC     
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLC----- 212

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
           +    +DA ++F++MT+K    +   Y I++  L + K+TD+    L+     G  P +I
Sbjct: 213 KNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSI 272

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           T N ++   C  G+ID+A  LL L  +   +     Y  LI  L +  K YD    +   
Sbjct: 273 TCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFR-AKRYDEVQEWCRK 331

Query: 467 L-KQGVIP 473
           + K G+ P
Sbjct: 332 MFKAGIEP 339



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/358 (21%), Positives = 143/358 (39%), Gaps = 79/358 (22%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ + + + G +     +N L+     +   + A     E S     P S T++I+I  
Sbjct: 361 LNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICG 420

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA--------------- 174
            C      EAR++ + M + G  P++ TF  L++ LCK+G L+EA               
Sbjct: 421 MCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSL 480

Query: 175 ---------------------------LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                                        VLDQM + GC P+   Y CL+   C  G++ 
Sbjct: 481 FLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLS 540

Query: 208 EAYEM-------LMNVKNDGLKP---------------------------DVYTYTAVMD 233
            A+ +       L + +++ LK                            ++  YT  + 
Sbjct: 541 VAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLI 600

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL-LKLMKKRNCL 292
           G C+  RS EA+++     E  +  N  +   L NG CK+G     V + L  ++K   L
Sbjct: 601 GLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFML 660

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             +I  + LL  L+   K++ A+ +   M   G+++DE + +  ++   +  W+ +++
Sbjct: 661 MPRIC-NQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHR-IKSYLLSVWKAQEM 716


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 187/406 (46%), Gaps = 48/406 (11%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V+ F+D++  +  L     A +      + G  P   T+  +++  C      EA
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA 299

Query: 140 RKVIDCMFDNGYHP--NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           R ++      G  P  NV  F  ++      G+L EA E+ + MG  GC+P+  TY+ L+
Sbjct: 300 RAML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILM 353

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            GLC +GR+  A  +L  ++  G  P+V TYT V+  FCK G  ++   LL E   +G+T
Sbjct: 354 HGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLT 413

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD----------------------- 294
            N   +N +    CK+G   + +GL++ M+ + C PD                       
Sbjct: 414 LNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 473

Query: 295 ------------KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
                        I+Y+T+++ LL+ G+ + AV + KEM+  G  +D    N L++ +C 
Sbjct: 474 FENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 533

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
               ++ L+     + E+M +K    +  +Y I+I  L K ++  +AL      +  G  
Sbjct: 534 DGNVDRSLV-----LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLA 588

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           P  +T+N +I  LC  G +  AL LL  ++     P   +Y++LI+
Sbjct: 589 PDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/471 (24%), Positives = 208/471 (44%), Gaps = 71/471 (15%)

Query: 70  IDIFDSI-KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG-LAPNSWTFSIMI 127
           + + D + ++ G   S   +N +L  L   +    A+  +        + P ++TF +  
Sbjct: 123 LHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAA 182

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           R  C      EA  ++  M  +G  P+   +  ++++LC  G + EA  +L++M  +GC 
Sbjct: 183 RALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 242

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            ++ T++ +++G+C +GRV EA  ++  +   G  P V TY  ++ G C+V +++EA  +
Sbjct: 243 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 302

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L    E     NVV FNT+  G   EG   +   L + M  + C PD  +YS L++GL K
Sbjct: 303 LGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCK 358

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEE-KDLLE------------- 352
            G+I  AV + +EM + GF  +      +L   C    W++ + LLE             
Sbjct: 359 LGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG 418

Query: 353 ---------------DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
                          +A  + ++M  +    D  +Y  +I  L   ++ +EA     + +
Sbjct: 419 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL 478

Query: 398 EMGHIPRTITFNNVIQAL-----------------------------------CGEGKID 422
           E G +   IT+N +I AL                                   C +G +D
Sbjct: 479 EEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVD 538

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++L+LL  M E    P+  SY++LI++L +  +  DA  L    L QG+ P
Sbjct: 539 RSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAP 589



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 170/332 (51%), Gaps = 5/332 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++++++   G       ++ L+  L  L    +AV+   E    G APN  T++I
Sbjct: 327 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTI 386

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++  +C    + + R +++ M   G   N   +  ++ +LCK GR+ EA+ ++ +M   G
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P+I +YN ++  LC   ++EEA  M  N+  +G+  +  TY  ++    + GR  +A+
Sbjct: 447 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 506

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            L  E I  G + +VV++N L    CK+G   + + LL+ M ++   P+ +SY+ L++ L
Sbjct: 507 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  ++R A+ + K+M+  G   D    N+L+ GLC   W     +  A  + EK+  + 
Sbjct: 567 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW-----MHAALNLLEKLHNEN 621

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
              D  TY I+I    K +  D+A + L+ A+
Sbjct: 622 VHPDIITYNILISWHCKVRLLDDAAMLLNRAM 653


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 189/418 (45%), Gaps = 34/418 (8%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  ++   V L+  E A+  ++EA   G+      F  +++C   +N    AR + D M 
Sbjct: 144 YATIIRIFVELSMFEDALLTYTEAKKVGVELQLCNF--LLKCLVERNQIIYARSLFDDMK 201

Query: 148 DNGYHPNVTTFTILVNSLCKSGRL--KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
            +G  PNV ++++L+++     RL   EA E+L +M   G KPN  TY   L GL    +
Sbjct: 202 SSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQ 261

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           V  A+  L  +   G   + Y + AV+ GFC+ G+  EA+E+ +   + G+ P+  +++ 
Sbjct: 262 VASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSI 321

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G CK+G  + G  LL  M +    P  +SYS+LL+GL + GK+  A  +F+ +   G
Sbjct: 322 LVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQG 381

Query: 326 FEVDERMMNSLLRGLCMKS--------WEE---KDLLEDAYQ------------------ 356
           F+ D  + + +L G C           W +    + + DAY                   
Sbjct: 382 FKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDAL 441

Query: 357 -VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            VFE M       +  T  I++   GK +  DEA + LH   + G +P    +  +I  L
Sbjct: 442 GVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGL 501

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           C   K D    +   M +   +P    Y ++I    +  K  +A  L+   L +G  P
Sbjct: 502 CKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKP 559



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 174/383 (45%), Gaps = 5/383 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  ++   ++  G   + + +   L  L    +  +A  F       G   N++ F+ 
Sbjct: 227 LAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNA 286

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I+ +C +    EA +V D M   G  P+  +++ILV+ LCK G +    ++L +M R G
Sbjct: 287 VIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNG 346

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P + +Y+ LL GLC  G+VE A+E+   ++  G K D   Y+ +++G C+        
Sbjct: 347 IAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVC 406

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L N+ +     P+   + +L   +C+       +G+ +LM      P+ ++ + L++G 
Sbjct: 407 DLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGF 466

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K   I  A     ++ +FG   +  M   ++ GLC     + +  +  + +F  M K+ 
Sbjct: 467 GKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLC-----KVNKSDHVWGIFADMIKRG 521

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
            V D   Y I+I +  K  K  EA    H  ++ G  P   T+ ++I  LC + ++ + +
Sbjct: 522 YVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVV 581

Query: 426 LLLFLMYEHAKIPSRTSYDMLIT 448
            L   M      P R  Y  LI 
Sbjct: 582 TLFKHMIWEGLTPDRILYTSLIV 604



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 137/288 (47%), Gaps = 9/288 (3%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E     +++   +   P+++ ++ +I  +C   +  +A  V + M D+G  PNV T TIL
Sbjct: 403 EVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTIL 462

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           V+   K   + EA   L ++ + G  PN+  Y  ++ GLC V + +  + +  ++   G 
Sbjct: 463 VDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGY 522

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PD   Y+ ++D F K  +  EA  L ++ ++ G  PNV T+ +L NG C +    + V 
Sbjct: 523 VPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVT 582

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L K M      PD+I Y++L+    K   ++ A+ IF+ M + G   D  +   L+ G  
Sbjct: 583 LFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGF- 641

Query: 342 MKSWEEKDLLEDAYQ-VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                 K L  D  Q + E+MT K       TY  +I  +G  K  DE
Sbjct: 642 -----SKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLI--IGYFKIGDE 682



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 111/253 (43%), Gaps = 1/253 (0%)

Query: 43  LDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
           LD   +P  +     VD   K   + E       +++ G   ++  +  ++  L  +N+ 
Sbjct: 448 LDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKS 507

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           +     F++    G  P++  +SI+I  +       EA ++   M D G  PNV T+T L
Sbjct: 508 DHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSL 567

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +N LC   RL E + +   M   G  P+   Y  L+   C    ++ A E+   +   GL
Sbjct: 568 INGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGL 627

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
             D + YT ++ GF KV   + A  L+ E   +G+TP+VVT+  L  GY K G   K   
Sbjct: 628 SADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANM 687

Query: 282 LLKLMKKRNCLPD 294
               M +    PD
Sbjct: 688 TYNSMLQAGITPD 700


>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 401

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 191/374 (51%), Gaps = 15/374 (4%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH--PNVTTFT 159
           E A   F E    G+ P+ ++++I++   C++N   EA +++  M D+G    P+V +++
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            ++N   K G L +   +LDQ  RI   PN+ TYN ++  LC    V++A E+L  +   
Sbjct: 93  TVINGFFKEGDLDK---MLDQ--RI--SPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G+ PD  TY +++ GFC  G+  EA+  L +    GV P+VVT+N+L +  CK G   + 
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             +   M KR   PD  +Y TLL G    G +     +   MVR G   +  + + L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV-- 263

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
            C  + +EK  +E+A  VF KM ++    +  TYG VI  L K  + ++A+++    I+ 
Sbjct: 264 -CAYAKQEK--VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDE 320

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P +I +N++I +LC   K +KA  L   M +     S   ++ +I    +  +  ++
Sbjct: 321 GLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIES 380

Query: 460 CALYGAALKQGVIP 473
             L+   ++ GV P
Sbjct: 381 GKLFDLMVRIGVKP 394



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 187/365 (51%), Gaps = 21/365 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG--LAPNSWTFSIMIRC 129
           +FD + + G    V  +N LL  L   N  + A++     +  G    P+  ++S +I  
Sbjct: 39  VFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVI-- 95

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
               N FF+    +D M D    PNV T+  ++ +LCK+  + +A+EVL  M + G  P+
Sbjct: 96  ----NGFFKEGD-LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN ++ G C  G+ +EA   L  +++DG++PDV TY ++MD  CK GR  EA ++ +
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 210

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
              +RG+ P++ T+ TL  GY  +G  ++  GLL LM +    P+   +S L+    K  
Sbjct: 211 SMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 270

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K+  A+ +F +M + G   +     +++  LC KS      +EDA   FE+M  +    D
Sbjct: 271 KVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLC-KSGR----VEDAMLYFEQMIDEGLRPD 325

Query: 370 PGTYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
              Y  +I +L    K +K +E  + +   ++ G    TI FN++I + C EG++ ++  
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEM---LDRGICLSTIFFNSIIDSHCKEGRVIESGK 382

Query: 427 LLFLM 431
           L  LM
Sbjct: 383 LFDLM 387



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 116/231 (50%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     ++ DG    V  +N L+  L        A K F   +  GL P+  T+  +
Sbjct: 168 KEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTL 227

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG HPN   F+ILV +  K  +++EA+ V  +M + G 
Sbjct: 228 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL 287

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN  TY  ++  LC  GRVE+A      + ++GL+PD   Y +++   C   +  +A E
Sbjct: 288 NPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEE 347

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
           L  E ++RG+  + + FN++ + +CKEG  ++   L  LM +    PD I+
Sbjct: 348 LFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 133/288 (46%), Gaps = 1/288 (0%)

Query: 43  LDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
           LD + +P  +     +  + KA  + + +++  ++ K G       +N ++       + 
Sbjct: 108 LDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQP 167

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A+ F  +  S G+ P+  T++ ++   C      EARK+ D M   G  P++TT+  L
Sbjct: 168 KEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTL 227

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +      G L E   +LD M R G  PN   ++ L+       +VEEA  +   ++  GL
Sbjct: 228 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL 287

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P+  TY  V+D  CK GR  +AM    + I+ G+ P+ + +N+L +  C      K   
Sbjct: 288 NPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEE 347

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           L   M  R      I ++++++   K G++  +  +F  MVR G + D
Sbjct: 348 LFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 67/131 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E + +F  +++ G N +   +  ++  L      E A+ +F +    GL P+S 
Sbjct: 268 KQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSI 327

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C  + + +A ++   M D G   +   F  +++S CK GR+ E+ ++ D M
Sbjct: 328 VYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387

Query: 182 GRIGCKPNIQT 192
            RIG KP+I T
Sbjct: 388 VRIGVKPDIIT 398


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 208/437 (47%), Gaps = 37/437 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L++    FD + +DG   +V  +  L+ A +   +  +A + F    S G  PN  
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586

Query: 122 TFSIMIRCYCNKNDFFEARKV------------IDCMF--DNG--YHPNVTTFTILVNSL 165
           T++ +I  +C      +A ++            +D  F  D+G    PN+ T+  LV+ L
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK+ ++KEA ++LD M   GC+PN   Y+ L+ G C VG+++EA  +   +   G  P+V
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           YTY++++D   K  R + A+++L+  +E    PNV+ +  + +G CK G   +   L+ +
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M+++ C P+ ++Y+ +++G  K GK+   + + ++M   G   +      L+   C    
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG- 825

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
               LL+DA+Q+ ++M +         Y  VI   G  ++   +L  L    E   +P  
Sbjct: 826 ----LLDDAHQLLDEMKQTYWPKHMAGYRKVIE--GFNREFIISLGLLDEIAENVAVPII 879

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM--------LITKLDQLEKSY 457
             +  +I + C  G+++ AL L      H  + S TSY          LI  L    K  
Sbjct: 880 PAYRILIDSFCKAGRLELALEL------HKXMSSCTSYSAADKDLYSSLIESLSLASKVD 933

Query: 458 DACALYGAALKQGVIPQ 474
            A  LY   +K+G IP+
Sbjct: 934 KAFELYADMIKRGGIPE 950



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 173/359 (48%), Gaps = 21/359 (5%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           S ++ ++  L   ++ + A   F E  S  + P+ +T++I+I  +C      +ARK  D 
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M  +G  PNV T+T L+++  K+ ++  A E+ + M   GC PN+ TY  L+ G C  G+
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 206 VEEAYEMLMNVKNDGLKPDV----------------YTYTAVMDGFCKVGRSNEAMELLN 249
           +E+A ++   ++ +   PDV                +TY A++DG CK  +  EA +LL+
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
                G  PN + ++ L +G+CK G   +   +   M +R   P+  +YS+L++ L K  
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A+ +   M+      +  +   ++ GLC     +    ++AY++   M +K    +
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLC-----KVGKTDEAYRLMSMMEEKGCHPN 775

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             TY  +I   GK  K D+ L  +      G  P  +T+  +I   C  G +D A  LL
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 198/473 (41%), Gaps = 87/473 (18%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +AS  +E +D    ++      +V  +  LL   +   +     +  S   + G  P+  
Sbjct: 311 EASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRR 370

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS----------------- 164
            F+ +I  YC   D+  A K++  M D G  P    + IL+                   
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430

Query: 165 ------------------------LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
                                   LC +G+ ++A  ++ +M   G  P+  TY+ ++  L
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C   +V+ A+ +   +K++ + PDV+TYT ++D FCKVG   +A +  +E +  G  PNV
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           VT+  L + Y K         L ++M    C+P+ ++Y+ L++G  K G+I  A  I+  
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 321 M--------VRFGFEVDERMM--------NSLLRGLC--MKSWEEKDL------------ 350
           M        V   F++D+  +         +L+ GLC   K  E +DL            
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670

Query: 351 ----------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
                           L++A  VF KM+++    +  TY  +I  L K K+ D AL  L 
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLS 730

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             +E    P  I +  +I  LC  GK D+A  L+ +M E    P+  +Y  +I
Sbjct: 731 RMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 154/334 (46%), Gaps = 17/334 (5%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+  L   ++ + A       S  G  PN   +  +I  +C      EA+ V   M 
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + GY PNV T++ L++ L K  RL  AL+VL +M    C PN+  Y  ++ GLC VG+ +
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EAY ++  ++  G  P+V TYTA++DGF K G+ ++ +EL+ +   +G  PN VT+  L 
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF- 326
           N  C  G       LL  MK+         Y  ++ G  +           + ++  G  
Sbjct: 819 NHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR-----------EFIISLGLL 867

Query: 327 -EVDERMMNSLLRG--LCMKSWEEKDLLEDAYQVFEKMTK--KVSVTDPGTYGIVIRTLG 381
            E+ E +   ++    + + S+ +   LE A ++ + M+     S  D   Y  +I +L 
Sbjct: 868 DEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLS 927

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
              K D+A       I+ G IP    F  +++ L
Sbjct: 928 LASKVDKAFELYADMIKRGGIPELSIFFYLVKGL 961



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 160/366 (43%), Gaps = 16/366 (4%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+  T++ ++R +   +    A  V   M D+G++ +  T    V+ LCK+GR +EA
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L ++++      K +   Y  ++ GLC     EEA + L  +++    P+V TY  ++ G
Sbjct: 287 LALIEKEEF---KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
             +  +      +L+  I  G  P+   FN+L + YC+ G       LLK M    C P 
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403

Query: 295 KISYSTLLNGLLKWGKIRPAVSI-------FKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
            + Y+ L+ G+    K+ P++ +       + EM+     +++  +++L R LC     E
Sbjct: 404 YVVYNILIGGICGNEKL-PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFE 462

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
           K     AY +  +M  K  + D  TY  VI  L    K D A +          +P   T
Sbjct: 463 K-----AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +  +I + C  G + +A      M      P+  +Y  LI    +  K   A  L+   L
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 468 KQGVIP 473
            +G IP
Sbjct: 578 SEGCIP 583



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 152/351 (43%), Gaps = 10/351 (2%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
            +++IR  C    +  A + +  + D GY P+  T+  LV    ++ RL  A  V  +M 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G   +  T  C +  LC  GR  EA  +   ++ +  K D   YT ++ G C+     
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFE 316

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EAM+ L+        PNVVT+  L  G  ++    +   +L +M    C P +  +++L+
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEEKDLLEDAYQVFEKM 361
           +   + G    A  + K+M   G +    + N L+ G+C  +     D+LE A + + +M
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEM 436

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                V +      + R L    K ++A   +   +  G IP T T++ VI  LC   K+
Sbjct: 437 LDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKV 496

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITK------LDQLEKSYDACALYGAA 466
           D A LL   M  +  +P   +Y +LI        L Q  K +D     G A
Sbjct: 497 DNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 11/293 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   +F  + + G   +V  ++ L+  L      + A+K  S       APN  
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVI 742

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ MI   C      EA +++  M + G HPNV T+T +++   K+G++ + LE++ QM
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           G  GC PN  TY  L+   C  G +++A+++L  +K       +  Y  V++GF +    
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EF 860

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK--RNCLPDKISYS 299
             ++ LL+E  E    P +  +  L + +CK G     + L K M         DK  YS
Sbjct: 861 IISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYS 920

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG-------LCMKSW 345
           +L+  L    K+  A  ++ +M++ G   +  +   L++G       LC  +W
Sbjct: 921 SLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRTLCXTTW 973


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 196/438 (44%), Gaps = 67/438 (15%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS--EASSY-GLA-PNSWTFSIMI 127
           + + ++++G    +  FN  + AL    +   A + FS  E   Y GL  PNS T+++M+
Sbjct: 239 LVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298

Query: 128 RCYCN---------------KND--------------------FFEARKVIDCMFDNGYH 152
           + +C                +ND                    F EA  V+  M D G  
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIG 358

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++ ++ IL++ LCK G L +A  ++  M R G  P+  TY CLL G C VG+V+ A  +
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSL 418

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +  +   P+ YT   ++     +GR +EA ELL +  E+G   + VT N + +G C 
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478

Query: 273 EGTPMKGVGLLKLMK-----------------------KRNCLPDKISYSTLLNGLLKWG 309
            G   K + ++K M+                       + NCLPD I+YSTLLNGL K G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           +   A ++F EM+    + D    N  +   C     ++  +  A++V + M KK     
Sbjct: 539 RFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFC-----KQGKISSAFRVLKDMEKKGCHKS 593

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  +I  LG   +  E    +    E G  P   T+N  IQ LC  GK++ A  LL 
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLD 653

Query: 430 LMYEHAKIPSRTSYDMLI 447
            M +    P+  S+  LI
Sbjct: 654 EMMQKNIAPNVFSFKYLI 671



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 176/390 (45%), Gaps = 50/390 (12%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N LL + +     E     + +    G++P ++TF+++IR  C+ +    AR++ D M 
Sbjct: 115 YNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMP 174

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G  PN  TF ILV   CK+G   + LE+L+ M   G  PN   YN ++   C  GR +
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRND 234

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE-------AIERGVTPNV 260
           ++ +++  ++ +GL PD+ T+ + +   CK G+  +A  + ++        + R   PN 
Sbjct: 235 DSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR---PNS 291

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           +T+N +  G+CK G       L + +++ + L    SY+  L GL++ GK   A ++ K+
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQ 351

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M+  G        N L+ GLC     +  +L DA  +   M +     D  TYG ++   
Sbjct: 352 MIDKGIGPSIYSYNILMDGLC-----KLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGY 406

Query: 381 GKGKKTDEAL-------------------IHLHHAIEMGHIPR----------------T 405
               K D A                    I LH    MG I                  T
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDT 466

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +T N ++  LCG G++DKA+ ++  M  H 
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/460 (23%), Positives = 203/460 (44%), Gaps = 57/460 (12%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++FD + + G   +   F  L+         +  ++  +   S+G+ PN   ++ ++  +
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSF 227

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM---GRIGC- 186
           C +    ++ K+++ M + G  P++ TF   +++LCK G++ +A  +   M     +G  
Sbjct: 228 CREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK-ND-------------------------- 219
           +PN  TYN +LKG C VG +E+A  +  +++ ND                          
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAET 347

Query: 220 --------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
                   G+ P +Y+Y  +MDG CK+G  ++A  ++      GV+P+ VT+  L +GYC
Sbjct: 348 VLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYC 407

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
             G       LL+ M + NCLP+  + + LL+ L   G+I  A  + ++M   G+ +D  
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTV 467

Query: 332 MMNSLLRGLCMKSWEEKDL----------------LEDAY--QVFEKMTKKVSVTDPGTY 373
             N ++ GLC     +K +                L ++Y   V + + +   + D  TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             ++  L K  +  EA       +     P ++ +N  I   C +GKI  A  +L  M +
Sbjct: 528 STLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEK 587

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                S  +Y+ LI  L    + ++   L     ++G+ P
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISP 627



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 160/325 (49%), Gaps = 9/325 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +  + +L+ S  +  R++    +   M   G  P   T+N L++ LC    V+ A E+
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G KP+ +T+  ++ G+CK G +++ +ELLN     GV PN V +NT+ + +C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCR 229

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
           EG       L++ M++   +PD +++++ ++ L K GK+  A  IF +M     E+DE +
Sbjct: 230 EGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM-----ELDEYL 284

Query: 333 M----NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                NS+   L +K + +  LLEDA  +FE + +   +    +Y I ++ L +  K  E
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIE 344

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   L   I+ G  P   ++N ++  LC  G +  A  ++ LM  +   P   +Y  L+ 
Sbjct: 345 AETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLH 404

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
               + K   A +L    ++   +P
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLP 429



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 149/305 (48%), Gaps = 9/305 (2%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G  P   TF +L+ +LC S  +  A E+ D+M   GCKPN  T+  L++G C  G  ++ 
Sbjct: 142 GISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            E+L ++++ G+ P+   Y  ++  FC+ GR++++ +L+ +  E G+ P++VTFN+  + 
Sbjct: 202 LELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISA 261

Query: 270 YCKEGTPMKGVGLLKLMKKRNCL----PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
            CKEG  +    +   M+    L    P+ I+Y+ +L G  K G +  A ++F+ +    
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
             V  +  N  L+GL            +A  V ++M  K       +Y I++  L K   
Sbjct: 322 DLVSLQSYNIWLQGLV-----RHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGM 376

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             +A   +      G  P  +T+  ++   C  GK+D A  LL  M  +  +P+  + ++
Sbjct: 377 LSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436

Query: 446 LITKL 450
           L+  L
Sbjct: 437 LLHSL 441



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 6/285 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+  T+S ++   C    F EA+ +   M      P+   + I ++  CK G++  A  V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRV 581

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L  M + GC  +++TYN L+ GL    ++ E + ++  ++  G+ P++ TY   +   C+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCE 641

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G+  +A  LL+E +++ + PNV +F  L   +CK         + +      C   +  
Sbjct: 642 GGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSI-CGQKEGL 700

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           YS + N LL  G++  A  + + ++  GFE+   +   L+  LC     +KD LE A  +
Sbjct: 701 YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLC-----KKDELEVASGI 755

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
             KM  K    DP     VI  LGK     EA       +EM  +
Sbjct: 756 LHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASV 800



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 102/244 (41%), Gaps = 2/244 (0%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFND 90
           FA A    AE +  K  P SL    F+    K   +     +   ++K G + S+  +N 
Sbjct: 540 FAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L++ L + N+         E    G++PN  T++  I+  C      +A  ++D M    
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKN 659

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PNV +F  L+ + CK      A EV +    I C      Y+ +   L   G++ +A 
Sbjct: 660 IAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKAT 718

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E+L  V + G +   + Y  ++   CK      A  +L++ I++G   +      + +G 
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGL 778

Query: 271 CKEG 274
            K G
Sbjct: 779 GKMG 782


>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 846

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 201/427 (47%), Gaps = 32/427 (7%)

Query: 79  DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
           +  NW+   F+ L+ A V L   E  ++ F +       PN    + ++      N   E
Sbjct: 187 EDCNWNPVIFDMLIKAYVKLGMVEKGLETFWKNVEGSFVPNVVACNCLLNGLSKINYIGE 246

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
             +V + M   G H N  TF I+ + LC+ G   +    L++M   G +P++ TYN L+ 
Sbjct: 247 CWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILIN 306

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           G C   R+E+A+ +   +   G+ P++ +Y+A+M+G CK G+  EA +L N+ ++RG+ P
Sbjct: 307 GYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDP 366

Query: 259 NVVTFNTLFNGYCKEGTPMKGV-GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           +VV++NTL +GYCKEG  M+    LL  M      PD ++   +  G  + GK+  A+++
Sbjct: 367 DVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNM 426

Query: 318 FKEMVRFGFEVDERMMNSLLRGLC------------MKSWEEKDLL-------------- 351
             E+ RFG ++ E + + LL  LC            ++  ++ D +              
Sbjct: 427 VAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLC 486

Query: 352 -----EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
                E+A  +  +M KK    +  TY  +I  L + K+T EA   L   + +G +P   
Sbjct: 487 SFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLE 546

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
               +I   C E  +DKA+ LL    +  ++    SY+ ++    ++    +   L    
Sbjct: 547 IKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAELMELQDKL 606

Query: 467 LKQGVIP 473
           +K G +P
Sbjct: 607 VKIGYVP 613



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 2/281 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN-EQETAVKFFSEASSYGLAPNS 120
           K   +KE   +F+ + + G +  V  +N L+        + +       E    G+ P++
Sbjct: 345 KEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDN 404

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T  I+ + Y  +     A  ++  +   G       +  L+ +LCK GR   A   L +
Sbjct: 405 VTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIR 464

Query: 181 MGRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           + + G   P + TY  L + LC    VEEA  +   +    +K ++ TY A++   C+V 
Sbjct: 465 ISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVK 524

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R++EA  LL E +  G+ P++     L NGYC+E    K V LLK   K   + D  SY+
Sbjct: 525 RTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYN 584

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            ++    + G +   + +  ++V+ G+  +      ++RGL
Sbjct: 585 AIVKVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRGL 625



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 1/206 (0%)

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK-VIDCMFDNGYHPNVTTFTIL 161
           +A+   +E   +G+      +  ++   C +   F AR  +I    D  Y P ++T+  L
Sbjct: 422 SALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKL 481

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
             SLC    ++EAL +  +M +   K N+ TY  ++  LC V R  EA  +L  + + G+
Sbjct: 482 AESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGI 541

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PD+    A+++G+C+    ++A+ LL    +     +  ++N +   +C+ G   + + 
Sbjct: 542 LPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAELME 601

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLK 307
           L   + K   +P+ ++   ++ GL K
Sbjct: 602 LQDKLVKIGYVPNSLTCKYVIRGLQK 627


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 162/329 (49%), Gaps = 9/329 (2%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M + G  P+V TFT L+N LC  GR+ +AL ++D+M   G +P    Y  ++ GLC +G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            E A  +L  ++   +K  V  Y A++D  CK G    A  L  E  ++G+ P+V+T++ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + + +C+ G       LL+ M +R   PD +++S L+N L+K GK+  A  I+ +M+R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   NS++ G C     ++D L DA ++ + M  K    D  T+  +I    K K+
Sbjct: 177 IFPTTITYNSMIDGFC-----KQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D  +         G +  T+T+  +I   C  G +D A  LL +M      P+  ++  
Sbjct: 232 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQS 291

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQ 474
           ++  L   ++   A A+     K  V P+
Sbjct: 292 MLASLCSKKELRKAFAILEDLQKSEVCPR 320



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 141/288 (48%), Gaps = 16/288 (5%)

Query: 50  RSLQAQRFVDRI----------------KASPLKERIDIFDSIKKDGTNWSVSDFNDLLM 93
           R LQA   VDR+                K    +  +++   +++      V  +N ++ 
Sbjct: 25  RVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID 84

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
            L        A   F+E    G+ P+  T+S MI  +C    + +A +++  M +   +P
Sbjct: 85  RLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINP 144

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           +V TF+ L+N+L K G++ EA E+   M R G  P   TYN ++ G C   R+ +A  ML
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
            ++ +    PDV T++ +++G+CK  R +  ME+  E   RG+  N VT+ TL +G+C+ 
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 264

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           G       LL +M      P+ I++ ++L  L    ++R A +I +++
Sbjct: 265 GDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 139/276 (50%), Gaps = 5/276 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  ++  L  + + E+A+   S+     +  +   ++ +I   C       A+ +   M 
Sbjct: 44  YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  P+V T++ +++S C+SGR  +A ++L  M      P++ T++ L+  L   G+V 
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA E+  ++   G+ P   TY +++DGFCK  R N+A  +L+    +  +P+VVTF+TL 
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NGYCK      G+ +   M +R  + + ++Y+TL++G  + G +  A  +   M+  G  
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
            +     S+L  LC K       L  A+ + E + K
Sbjct: 284 PNYITFQSMLASLCSKKE-----LRKAFAILEDLQK 314



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 93/180 (51%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           N  V  F+ L+ ALV   +   A + + +    G+ P + T++ MI  +C ++   +A++
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKR 202

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           ++D M      P+V TF+ L+N  CK+ R+   +E+  +M R G   N  TY  L+ G C
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
            VG ++ A ++L  + + G+ P+  T+ +++   C      +A  +L +  +  V P +V
Sbjct: 263 QVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRIV 322



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 72/165 (43%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   + E  +I+  + + G   +   +N ++      +    A +     +S   +P+ 
Sbjct: 157 VKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDV 216

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TFS +I  YC         ++   M   G   N  T+T L++  C+ G L  A ++L+ 
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV 276

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           M   G  PN  T+  +L  LC    + +A+ +L +++   + P +
Sbjct: 277 MISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRI 321


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 189/408 (46%), Gaps = 7/408 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  + + G +   + +  LLM      +       FS+  S  + P+   FS M+  +
Sbjct: 316 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLF 375

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
               +  +A    + + + G  P+   +TIL+   C+ G + EA+ + ++M + GC  ++
Sbjct: 376 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDV 435

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN +L GLC    + EA ++   +   GL PD YT T ++DG CK+G    AMEL  +
Sbjct: 436 VTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKK 495

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             E+ +  +VVT+NTL +G+ K G       +   M  +  LP  IS+S L+N L   G 
Sbjct: 496 MKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGH 555

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A  ++ EM+    +    + NS+++G C           D     EKM  +  V D 
Sbjct: 556 LSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNAS-----DGEIFLEKMISEGFVPDC 610

Query: 371 GTYGIVIRTLGKGKKTDEA--LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            +Y  +I    K +   +A  L+      + G +P   T+N+++   C E ++ +A  +L
Sbjct: 611 ISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVL 670

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
             M E    P R++Y  LI      +   +A   +   L++G  P  K
Sbjct: 671 RKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDK 718



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 201/443 (45%), Gaps = 30/443 (6%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++A  L+E  + F  ++  G   S+   N L+ +LV +   E A + + E S  G+  N 
Sbjct: 166 VQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNV 225

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T +IM+   C      +    +  + + G +P++ T+  L+++    G ++EA E++  
Sbjct: 226 YTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHA 285

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P + TYN ++ GLC  G+ E A E+   +   GL PD  TY +++   CK G 
Sbjct: 286 MPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 345

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           + E   + ++   R V P++V F+++ + + + G   K +     +K+   +PD + Y+ 
Sbjct: 346 AVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 405

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-----------SWEEKD 349
           L+ G  + G I  A+++  EM++ G  +D    N++L GLC +              E+ 
Sbjct: 406 LIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERG 465

Query: 350 LLEDAY-------------------QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
           L  D+Y                   ++F+KM +K    D  TY  ++   GK    D A 
Sbjct: 466 LFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAK 525

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                 +    +P  I+F+ ++ ALC +G + +A  +   M   +  P+    + +I   
Sbjct: 526 EIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGY 585

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +   + D        + +G +P
Sbjct: 586 CRSGNASDGEIFLEKMISEGFVP 608



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 153/320 (47%), Gaps = 5/320 (1%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N + F +L+ +  ++ +L+EA E    +   G   +I   N L+  L  +G VE A+ + 
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +   G+  +VYT   +++  CK G+  +    L+E  E+GV P++VT+NTL + Y  +
Sbjct: 214 QEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQ 273

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +   L+  M  +   P   +Y+T++NGL K GK   A  +F EM+R G   D    
Sbjct: 274 GLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 333

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            SLL   C K     D +E    +F  M  +  V D   +  ++    +    D+AL++ 
Sbjct: 334 RSLLMEACKKG----DAVETE-NIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 388

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
           +   E G IP  + +  +IQ  C +G I +A+ L   M +        +Y+ ++  L + 
Sbjct: 389 NSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 448

Query: 454 EKSYDACALYGAALKQGVIP 473
           +   +A  L+    ++G+ P
Sbjct: 449 KMLGEADKLFNEMTERGLFP 468



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 160/373 (42%), Gaps = 42/373 (11%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E  +IF  ++       +  F+ ++         + A+ +F+     GL P++  ++I+I
Sbjct: 348 ETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 407

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           + YC K    EA  + + M   G   +V T+  +++ LCK   L EA ++ ++M   G  
Sbjct: 408 QGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLF 467

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV--------- 238
           P+  T   L+ G C +G ++ A E+   +K   +K DV TY  ++DGF KV         
Sbjct: 468 PDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEI 527

Query: 239 --------------------------GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
                                     G  +EA  + +E I + + P V+  N++  GYC+
Sbjct: 528 WADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCR 587

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM--VRFGFEVDE 330
            G    G   L+ M     +PD ISY+TL+ G +K   +  A  + K+M   + G   D 
Sbjct: 588 SGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDV 647

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              NS+L G C      ++ +++A  V  KM ++    D  TY  +I          EA 
Sbjct: 648 FTYNSILHGFC-----RENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAF 702

Query: 391 IHLHHAIEMGHIP 403
                 ++ G  P
Sbjct: 703 RFHDEMLQRGFSP 715



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 113/503 (22%), Positives = 202/503 (40%), Gaps = 63/503 (12%)

Query: 14  NTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-------KASPL 66
           N+N RNH  + + N L V         E L    N  SL  QRFVD++       K + L
Sbjct: 56  NSNVRNH--LIRLNPLAV--------VEVLYRCRNDLSL-GQRFVDQLGFNFPNFKHTSL 104

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG-LAPNSWTFSI 125
                I   ++    +  +SD    ++ ++  +         S  S+Y     N   F +
Sbjct: 105 SLSAMIHILVR----SGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDL 160

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +IR +       EA +    +   GY  ++     L+ SL + G ++ A  +  ++ R G
Sbjct: 161 LIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSG 220

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              N+ T N ++  LC  G++E+    L  V+  G+ PD+ TY  ++  +   G   EA 
Sbjct: 221 VGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAF 280

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEG---------TPMKGVGL-------------- 282
           EL++    +G +P V T+NT+ NG CK G           M   GL              
Sbjct: 281 ELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 340

Query: 283 ------------LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
                          M+ R+ +PD + +S++++   + G +  A+  F  +   G   D 
Sbjct: 341 CKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 400

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
            +   L++G C      K ++ +A  +  +M ++    D  TY  ++  L K K   EA 
Sbjct: 401 VIYTILIQGYC-----RKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 455

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
              +   E G  P + T   +I   C  G +  A+ L   M E        +Y+ L+   
Sbjct: 456 KLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGF 515

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            ++     A  ++   + + ++P
Sbjct: 516 GKVGDIDTAKEIWADMVSKEILP 538



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 2/235 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+  +++F  +K+      V  +N LL     + + +TA + +++  S  + P   
Sbjct: 482 KLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 541

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +FSI++   C+K    EA +V D M      P V     ++   C+SG   +    L++M
Sbjct: 542 SFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKM 601

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML--MNVKNDGLKPDVYTYTAVMDGFCKVG 239
              G  P+  +YN L+ G      + +A+ ++  M  K  GL PDV+TY +++ GFC+  
Sbjct: 602 ISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCREN 661

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           +  EA  +L + IERGV P+  T+ +L NG+  +    +       M +R   PD
Sbjct: 662 QMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/492 (24%), Positives = 212/492 (43%), Gaps = 82/492 (16%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  +++   +F  +K+ G N  V  +  L+ +       E A  +F E  S G +PN  
Sbjct: 464 QAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVV 523

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV---- 177
           T++ ++  Y       +A  +   M D   +PN  T++ L++ LCK+G +++A EV    
Sbjct: 524 TYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583

Query: 178 -----------------------------------------------LDQMGRIGCKPNI 190
                                                          LD M   GC+PN 
Sbjct: 584 IGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQ 643

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             Y+ L+ G C +G+++ A E+ + +   G  P V+TYT+++D   K GR + AM++L+E
Sbjct: 644 IVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSE 703

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +     PNVVT+  + +G  K G   K + LL LM+++ C P+ ++Y+ L++GL K GK
Sbjct: 704 MLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGK 763

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLED---------------- 353
              ++ +FK+M   G   +      L+   C     +E  LL D                
Sbjct: 764 ADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHC 823

Query: 354 AYQVF-----------EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG-- 400
           A Q F           E+M    +V     YG++I +  K  + + AL      +E+   
Sbjct: 824 AVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSS 883

Query: 401 -HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
            ++  T  + ++IQALC   ++++A  L   M     +P    +  L+  L ++ K  +A
Sbjct: 884 LNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEA 943

Query: 460 CALYGAALKQGV 471
             L      +GV
Sbjct: 944 LQLCYGRCHEGV 955



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 183/389 (47%), Gaps = 22/389 (5%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            ++   I   + + G     S +  ++  L    + E +   F E    G+ P+ +T++I
Sbjct: 433 FEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTI 492

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C      +AR   D M   G  PNV T+T L+++  KS +L +A ++  +M    
Sbjct: 493 LIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAA 552

Query: 186 CKPNIQTYNCLLKGLCYVGRVE---EAYEMLM----NVKND---------GLKPDVYTYT 229
           C PN  TY+ L+ GLC  G ++   E YE L+    NV++D          + P+V TY 
Sbjct: 553 CYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYG 612

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           A++DG CK  + ++A ELL+  +  G  PN + ++ L +G+CK G       +   M K 
Sbjct: 613 ALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKC 672

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
             LP   +Y++L++ + K G++  A+ +  EM+      +     +++ GL      +  
Sbjct: 673 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGL-----SKVG 727

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            +E A  +   M +K    +  TY  +I  LGK  K D +L         G  P  +T+ 
Sbjct: 728 EIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYR 787

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            +I   C  G +D+A LLL  M +H   P
Sbjct: 788 VLINHCCAAGLLDEAHLLLDEM-KHTHWP 815



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 199/454 (43%), Gaps = 52/454 (11%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I + +  +G N + S FN L+       +   A K F+  ++ G  P    ++I I   C
Sbjct: 328 IINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSIC 387

Query: 132 NKNDFFEAR------KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            + +   A       KV + M       N          LC  G+ ++A ++L +M R G
Sbjct: 388 GQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKG 447

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY  ++  LC   +VE+++ +   +K  G+ PDVYTYT ++D FCK G   +A 
Sbjct: 448 FVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQAR 507

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
              +E    G +PNVVT+  L + Y K    ++   +   M    C P+ ++YS L++GL
Sbjct: 508 SWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGL 567

Query: 306 LKWGKIRPAVSIFKEMV--------RFGFEVDER--------MMNSLLRGLC--MKSWEE 347
            K G+I+ A  ++++++         F FE ++            +L+ GLC   K  + 
Sbjct: 568 CKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDA 627

Query: 348 KDLL----------------------------EDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            +LL                            ++A +VF +MTK   +    TY  +I  
Sbjct: 628 HELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDR 687

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           + K  + D A+  L   +     P  +T+  +I  L   G+I+KAL LL LM E    P+
Sbjct: 688 MFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPN 747

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y  LI  L +  K+  +  L+     +G  P
Sbjct: 748 VVTYTALIDGLGKTGKADASLKLFKQMNSKGCAP 781



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 171/416 (41%), Gaps = 65/416 (15%)

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           LM   + NE   A+ F          PN  T+  ++  +  K  F   +++I+ M   G 
Sbjct: 281 LMEASLFNE---AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGC 337

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN----------------- 194
           +PN + F  LV+  C +G    A ++ ++M   G  P    YN                 
Sbjct: 338 NPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAEL 397

Query: 195 ---------------CLL---------KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
                          C+L         + LC VG+ E+A+++L  +   G  PD  TYT 
Sbjct: 398 LDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTK 457

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           V+   C+  +  ++  L  E    GV P+V T+  L + +CK G   +       M+   
Sbjct: 458 VITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVG 517

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C P+ ++Y+ LL+  LK  ++  A  IF  MV      +    ++L+ GLC K+ E    
Sbjct: 518 CSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLC-KAGE---- 572

Query: 351 LEDAYQVFEKMTKKVSVTDPG----------------TYGIVIRTLGKGKKTDEALIHLH 394
           ++ A +V+EK+       +                  TYG +I  L K +K  +A   L 
Sbjct: 573 IQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLD 632

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             +  G  P  I ++ +I   C  GKID A  +   M +   +PS  +Y  LI ++
Sbjct: 633 AMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRM 688



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 141/320 (44%), Gaps = 14/320 (4%)

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           +LV   C+ G   EALE L ++   G +P+  TYN L++ L   G+VE  + +   +   
Sbjct: 174 VLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSAS 233

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G   D  T        CKVGR  +A+ +L    +     + V    + +G  +     + 
Sbjct: 234 GFCMDRSTIGYFAQALCKVGRWADALNMLE---KEDFNLDTVLCTQMISGLMEASLFNEA 290

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           +  L  M+  +C+P+ ++Y TLL+G LK  +      I   M+  G   +  + NSL+ G
Sbjct: 291 MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHG 350

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL-GKGKKTDEALIHLHHAIE 398
            C            AY++F +MT   S      Y I I ++ G+ +  +  L+ L   + 
Sbjct: 351 YC-----NAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVY 405

Query: 399 MGHIPRTITFNNVIQA-----LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
              +  +   N V  A     LCG GK +KA  +L  M     +P  ++Y  +IT L Q 
Sbjct: 406 EEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQA 465

Query: 454 EKSYDACALYGAALKQGVIP 473
           +K   +  L+    + GV P
Sbjct: 466 KKVEKSFLLFQEMKRAGVNP 485



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 139/326 (42%), Gaps = 4/326 (1%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
            ++++R  C    + EA + +  + D GY P+  T+  LV  L  +G+++    V  +M 
Sbjct: 172 LNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMS 231

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G   +  T     + LC VGR  +A  ML   + +    D    T ++ G  +    N
Sbjct: 232 ASGFCMDRSTIGYFAQALCKVGRWADALNML---EKEDFNLDTVLCTQMISGLMEASLFN 288

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EAM  L+        PNVVT+ TL +G+ K+        ++ +M    C P+   +++L+
Sbjct: 289 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLV 348

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKM 361
           +G    G    A  +F  M   G        N  +  +C  +     +LL+   +V+E+M
Sbjct: 349 HGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEM 408

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                V +        R L    K ++A   L   +  G +P T T+  VI  LC   K+
Sbjct: 409 LAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKV 468

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI 447
           +K+ LL   M      P   +Y +LI
Sbjct: 469 EKSFLLFQEMKRAGVNPDVYTYTILI 494



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 115/254 (45%), Gaps = 37/254 (14%)

Query: 40  AESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVML 98
           +E L+   NP  +     +D + K   +++ +++   +++ G + +V  +  L+  L   
Sbjct: 702 SEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKT 761

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD-------NGY 151
            + + ++K F + +S G APN  T+ ++I   C      EA  ++D M          GY
Sbjct: 762 GKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGY 821

Query: 152 HPNVTTFT--------------------------ILVNSLCKSGRLKEALEVLDQMGRIG 185
           H  V  F+                          +L++S  K+GRL+ ALE+  ++  + 
Sbjct: 822 HCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVS 881

Query: 186 CKPNIQT---YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              N+ +   Y  L++ LC   +VEEA+ +   +   G+ PD+  + +++ G  +V + +
Sbjct: 882 SSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWD 941

Query: 243 EAMELLNEAIERGV 256
           EA++L       GV
Sbjct: 942 EALQLCYGRCHEGV 955


>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
 gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 535

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 214/452 (47%), Gaps = 29/452 (6%)

Query: 34  AASLSTAESL--DLKEN--PRSLQAQRFVDRIKASPLKERID----IFDSIKKDGTNWSV 85
           A +    ESL  DL+ +  P       F+D ++   L  R +    IF  I   G   SV
Sbjct: 96  ARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSV 155

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
              N LL  L+     +     F  +  S+G+ PN +T +++++  C KND   A KV+D
Sbjct: 156 RSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLD 215

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   G  PN+ T+T ++      G ++ A  VL++M   G  P+  TY  L+ G C +G
Sbjct: 216 EIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLG 275

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R  EA  ++ +++ + ++P+  TY  ++   CK  +S EA  + +E +ER   P+     
Sbjct: 276 RFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCC 335

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            + +  C++    +  GL + M K NC+PD    STL++ L K G++  A  +F E  + 
Sbjct: 336 KVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK- 394

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G        N+L+ G+C     EK  L +A ++++ M ++    +  TY ++I  L K  
Sbjct: 395 GSIPSLLTYNTLIAGMC-----EKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNG 449

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
              E +  L   +E+G  P   TF  + + L   GK + A+ ++ +   + K+  + S++
Sbjct: 450 NVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV-DKESWE 508

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
           + + K             +   L +GV+P ++
Sbjct: 509 LFLKK-------------FAGELDKGVLPLKE 527


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 176/348 (50%), Gaps = 8/348 (2%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC-MFDNGYHPNVTTFTI 160
           E AV F   +    + P+  +F+ ++  YC K  F +  K   C +   G  P+V +  I
Sbjct: 223 EDAVLFLRTSEWKDIGPSVVSFNSIMSSYC-KLGFVDMAKSFFCTVLKCGLVPSVYSHNI 281

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+N LC  G + EALE+   M + G +P+  TYN L+KG   +G +  A E++ ++ + G
Sbjct: 282 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKG 341

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT-PNVVTFNTLFNGYCKEGTPMKG 279
           L PDV TYT ++ G C++G  +  + LL + + RG    +++ ++ + +G CK G   + 
Sbjct: 342 LSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEA 401

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + L   ++     PD ++YS +++GL K GK   AV ++ EM       + R + +++ G
Sbjct: 402 LSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLG 461

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC     +K +L +A  + + +       D   Y IVI    K    +EAL     AIE 
Sbjct: 462 LC-----QKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIES 516

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           G  P   TFN++I   C    I +A  +L ++  +  +PS  SY  L+
Sbjct: 517 GITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLM 564



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 157/333 (47%), Gaps = 9/333 (2%)

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           +S+M+   C      EA  +   +   G  P++  ++I+++ LCK G+   A+ V D+M 
Sbjct: 385 YSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMC 444

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
                PN +T   ++ GLC  G + EA  +L ++ + G   D+  Y  V+DG+ K G   
Sbjct: 445 YKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIE 504

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA+EL   AIE G+TPNV TFN+L  GYCK     +   +L ++K    +P  +SY+TL+
Sbjct: 505 EALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLM 564

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE--------EKDLLEDA 354
           +     G I+    + +EM   G        + + +GLC + W+         + +LE  
Sbjct: 565 DAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLC-RGWKLENCNQVLRERILEKF 623

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
             V   M  +    D  TY  +I+ L + K    A             P + T+N +I +
Sbjct: 624 NHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDS 683

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           LC  G I KA   L+ + +     S+ +Y  +I
Sbjct: 684 LCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVI 716



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 186/406 (45%), Gaps = 25/406 (6%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S+  ++ +L  L      + A+  F +  +YGL P+   +SI+I   C    F  A +V 
Sbjct: 381 SIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVY 440

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M      PN  T   ++  LC+ G L EA  +LD +   G   +I  YN ++ G    
Sbjct: 441 DEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKS 500

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G +EEA E+       G+ P+V T+ +++ G+CK     EA ++L+     G+ P+VV++
Sbjct: 501 GCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSY 560

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV- 322
            TL + Y   G+      L + MK     P  ++YS +  GL +  K+     + +E + 
Sbjct: 561 TTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERIL 620

Query: 323 -RF----------GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
            +F          G   D+   N++++ LC         L  A+++F+KM  +       
Sbjct: 621 EKFNHVLRDMESEGITPDQITYNTIIQYLC-----RVKHLSRAFELFKKMKSQNLDPTSA 675

Query: 372 TYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRT-ITFNNVIQALCGEGKIDKALLL 427
           TY I+I +L   G  +K D  L    ++++  ++  +   +  VI+A C +G  + A++L
Sbjct: 676 TYNILIDSLCIYGCIRKADRFL----YSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVIL 731

Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              + +     S   Y  +I +L +   + ++   +   L +G+ P
Sbjct: 732 FNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISP 777



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 183/431 (42%), Gaps = 37/431 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F  ++  G    +  ++ ++  L  L + + AV+ + E     + PNS 
Sbjct: 394 KTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSR 453

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T   ++   C K    EAR ++D +  +G   ++  + I+++   KSG ++EALE+    
Sbjct: 454 TLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVA 513

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN+ T+N L+ G C    + EA ++L  +K  GL P V +YT +MD +   G  
Sbjct: 514 IESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSI 573

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYC------------KEGTPMKGVGLLKLMKKR 289
               EL  E    G+ P  VT++ +F G C            +E    K   +L+ M+  
Sbjct: 574 KSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESE 633

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD+I+Y+T++  L +   +  A  +FK+M     +      N L+  LC+     K 
Sbjct: 634 GITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRK- 692

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
               A +    + K+        Y  VI+        + A+I  +  ++ G       ++
Sbjct: 693 ----ADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYS 748

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK-----LDQLEKSYDACALYG 464
            VI  LC                 H  I S+  + +++++     LD  E    +  L  
Sbjct: 749 AVINRLCR---------------RHLAIESKYFFCLMLSRGISPDLDICEVMIKSDELLS 793

Query: 465 AALKQGVIPQR 475
             +K G++P +
Sbjct: 794 WTIKWGLLPDQ 804



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 93/400 (23%), Positives = 181/400 (45%), Gaps = 27/400 (6%)

Query: 92  LMALVMLNEQETAVKFFSEASS-YGLAPNSWTFSIMIRCYCNKNDFFEARKVID------ 144
           +MA +M    + +V FF E    YG   + ++  ++   +  +  F E + +++      
Sbjct: 66  IMAELMSESSDLSVWFFKELRDIYGFRHSRFSTLLVSHIFAGQRRFKELQVILEQLLQEE 125

Query: 145 ---C-MFDNGYHPNVTTFTILVNSLCKSGRLK---EALEVLDQMGRIGCKPNIQTYNCLL 197
              C +  N +    +T  +    L  S RL+   E+L +L +M       + Q+YN +L
Sbjct: 126 GKLCELLSNSFRKWESTGLVWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVL 185

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
                  ++ + Y+ + + KN+      +TY+ V+DG C+  +  +A+  L  +  + + 
Sbjct: 186 YNFRETDKMWDVYKEIKD-KNE------HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIG 238

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+VV+FN++ + YCK G           + K   +P   S++ L+NGL   G I  A+ +
Sbjct: 239 PSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 298

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             +M + G E D    N L++G  +       ++  A +V + M  K    D  TY I++
Sbjct: 299 ASDMNKHGVEPDSVTYNILVKGFHLLG-----MISGAGEVIQDMLDKGLSPDVITYTILL 353

Query: 378 RTLGKGKKTDEALIHLHHAIEMG-HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
               +    D  LI L   +  G  +   I ++ ++  LC  G++D+AL L + +  +  
Sbjct: 354 CGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGL 413

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            P   +Y ++I  L +L K   A  +Y     + ++P  +
Sbjct: 414 TPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSR 453


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 206/433 (47%), Gaps = 25/433 (5%)

Query: 36  SLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMA 94
           +++ A++  L+    + +A  F     A    E +D F  ++ + G   +   +N +L  
Sbjct: 124 AIADAQAAGLQPPAAAFEALIFA-HASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRV 182

Query: 95  LVMLNEQ-ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
           LV        A+  ++   + G  PN  T+++++   C +    +A K+ D M   G  P
Sbjct: 183 LVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITP 242

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           NV T TIL++S+C +G+LKEA  +L+ M   GC P+  TYN  L GLC  GRV+EA E L
Sbjct: 243 NVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERL 302

Query: 214 MNVKNDG-LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG-VTPNVVTFNTLFNGYC 271
             ++  G     +  Y+ ++DG    GR  E  +   E +E+   +P++V +  +  G  
Sbjct: 303 EALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCA 362

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           + G           MK++   PD   Y+TLL  L   G +  A S+  EM +    +D  
Sbjct: 363 EAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTN 422

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
               ++ GLC     +K L+++A QVF+ M +        TY ++I  L +  + +EA +
Sbjct: 423 THTIMIHGLC-----KKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARM 477

Query: 392 HLHHAIEMGHIPR-----TITFNNV---------IQALCGEGKIDKALLLLFLMYEHAKI 437
            L + +E+G+ P      T+  N V         + ++C  G++ KA  LL  + +   +
Sbjct: 478 -LFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVV 536

Query: 438 PSRTSYDMLITKL 450
           P   +Y+ L+  L
Sbjct: 537 PDVVTYNTLLNGL 549



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 160/328 (48%), Gaps = 9/328 (2%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           G  P    F  L+ +   +GR  EA++   +M G  GC+P    YN +L+ L   G V  
Sbjct: 132 GLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVP 191

Query: 209 AYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
               L N +   G  P+  TY  +MDG CK G + +A++L +E ++RG+TPNV T   L 
Sbjct: 192 LALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILL 251

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG-F 326
           +  C  G   +   LL  M+ + C PD+++Y+  L+GL K G++  A+   + + R G F
Sbjct: 252 SSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTF 311

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT-DPGTYGIVIRTLGKGKK 385
            +  +  + L+ GL +         E+ +Q + ++ ++   + D   Y I+IR   +  +
Sbjct: 312 VLGLKGYSCLIDGLFLAGR-----YEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGR 366

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D+A        E    P T  +N +++ALC  G +D A  L+  M ++  +    ++ +
Sbjct: 367 IDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTI 426

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           +I  L + +   +A  ++   ++ G  P
Sbjct: 427 MIHGLCKKQLVDEAMQVFDGMVEVGCHP 454



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 99/449 (22%), Positives = 176/449 (39%), Gaps = 87/449 (19%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + +    FD +K+         +N LL AL    + + A    SE +   +  ++ 
Sbjct: 363 EAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTN 422

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL-------------------- 161
           T +IMI   C K    EA +V D M + G HP V T+ +L                    
Sbjct: 423 THTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKM 482

Query: 162 ----------------------------VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
                                       V+S+C+SG++ +A ++L  +   G  P++ TY
Sbjct: 483 EVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTY 542

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N LL GLC V  ++ A  +   ++  G   D  TY  ++D   +  R N+AM L  + + 
Sbjct: 543 NTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILH 602

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
            G TP++  +N++    C                + N L   I++    + LLK      
Sbjct: 603 IGGTPSLSIYNSIMRSLC----------------RMNKLSQAINF--WFDHLLK------ 638

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
                    ++     + ++ S       K +EE   L++A +   K+ ++    +   Y
Sbjct: 639 ---------KYNLSAQDEVIAS-----ARKKFEEGS-LDEAVRELIKIDQEYGSVNSCPY 683

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
            I +  L + ++ D+AL   H   E G         ++ + LC E  +D A+ ++     
Sbjct: 684 TIWLIGLIQARRIDDALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYTLN 743

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACAL 462
              I SR   + L++ L    +  DA AL
Sbjct: 744 KRFIMSRHVGNRLLSSLCIRHRRKDAQAL 772


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 200/441 (45%), Gaps = 31/441 (7%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A    E   + +  +  G   SV  +N +L  L    + + A++ F E     + PN  T
Sbjct: 214 AGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPT 272

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I   C   +   A KV D M + G  PNV T  I+++ LCK+ +L EA  + + M 
Sbjct: 273 YNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMD 332

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              C P+  T+  L+ GL   GRV++AY +   + +    P+V  YT+++  F K  R  
Sbjct: 333 YKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKE 392

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +  ++  E +  G +P+++  NT  +   K G   KG  L + +K R  LPD  SYS L+
Sbjct: 393 DGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILI 452

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------------MKSWEEK 348
           + L+K G  R    ++  M   G  +D R  N+++ G C              MK+    
Sbjct: 453 HSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHH 512

Query: 349 ----------------DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
                           D L++AY +FE+        +   Y  +I   GK  + DEA + 
Sbjct: 513 PTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLV 572

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           +   ++ G  P   T+N ++  L    +I++AL+    M +    P++ +Y +LI  L +
Sbjct: 573 MEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCK 632

Query: 453 LEKSYDACALYGAALKQGVIP 473
           + K   A   +    KQG+ P
Sbjct: 633 VRKFNKAFVFWQEMQKQGLKP 653



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 178/365 (48%), Gaps = 5/365 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  + + G +  +   N  +  +    E E     F E  + G  P++ ++SI+I    
Sbjct: 397 MYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLV 456

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 E  ++   M D G   +   +  +++  CKSG++ +A ++L++M  +G  P + 
Sbjct: 457 KAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVV 516

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  ++ GL  + R++EAY +    K++G++ +   Y++++DGF KVGR +EA  ++ E 
Sbjct: 517 TYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEM 576

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+TPNV T+N L +G  K     + +   + MK   C P++I+Y  L+NGL K  K 
Sbjct: 577 MQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKF 636

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A   ++EM + G + +     +++ GL  KS      +  A  +FE+      + D  
Sbjct: 637 NKAFVFWQEMQKQGLKPNTITYTAMISGLA-KSGN----VAQASSLFERFRASGGIPDSA 691

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           +Y  +I  L    +  +A          G    T T   ++ AL     +++A ++  ++
Sbjct: 692 SYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQAAIVGAVL 751

Query: 432 YEHAK 436
            E AK
Sbjct: 752 RETAK 756



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 190/412 (46%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++    + D++K+ G   +V   N ++  L    + + A   F        +P+  
Sbjct: 282 KAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGA 341

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF  +I     +    +A ++ + M D    PNV  +T L+ +  K  R ++  ++  +M
Sbjct: 342 TFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEM 401

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R GC P++   N  +  +   G  E+   +   +K  G  PD  +Y+ ++    K G +
Sbjct: 402 MRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFA 461

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            E  EL     ++G   +   +NT+ +G+CK G   K   LL+ MK     P  ++Y ++
Sbjct: 462 RETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSV 521

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K  ++  A  +F+E    G E+++ + +SL+ G     + +   +++AY V E+M
Sbjct: 522 VDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDG-----FGKVGRVDEAYLVMEEM 576

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +K    +  T+  ++  L K ++ +EAL+      ++   P  IT+  +I  LC   K 
Sbjct: 577 MQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKF 636

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +KA +    M +    P+  +Y  +I+ L +      A +L+      G IP
Sbjct: 637 NKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIP 688



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 169/376 (44%), Gaps = 40/376 (10%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+      + +E   K + E    G +P+    +  + C     +  + R + + + 
Sbjct: 378 YTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIK 437

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G+ P+  +++IL++SL K+G  +E  E+   M   GC  + + YN ++ G C  G+V 
Sbjct: 438 ARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVN 497

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +AY++L  +K  G  P V TY +V+DG  K+ R +EA  L  EA   G+  N V +++L 
Sbjct: 498 KAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLI 557

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G+ K G   +   +++ M ++   P+  +++ LL+GL+K  +I  A+  F+ M      
Sbjct: 558 DGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSM------ 611

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                               KDL     Q+              TY I+I  L K +K +
Sbjct: 612 --------------------KDLKCTPNQI--------------TYCILINGLCKVRKFN 637

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +A +      + G  P TIT+  +I  L   G + +A  L         IP   SY+ +I
Sbjct: 638 KAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMI 697

Query: 448 TKLDQLEKSYDACALY 463
             L    ++ DA  L+
Sbjct: 698 EGLSIANRALDAYQLF 713



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 157/330 (47%), Gaps = 5/330 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA   ++   +F+ IK  G       ++ L+ +LV         + +      G   ++ 
Sbjct: 422 KAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTR 481

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  +C      +A ++++ M   G+HP V T+  +V+ L K  RL EA  + ++ 
Sbjct: 482 AYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEA 541

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + N   Y+ L+ G   VGRV+EAY ++  +   GL P+VYT+  ++DG  K    
Sbjct: 542 KSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEI 601

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           NEA+       +   TPN +T+  L NG CK     K     + M+K+   P+ I+Y+ +
Sbjct: 602 NEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAM 661

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K G +  A S+F+     G   D    N+++ GL   S   + L  DAYQ+FE+ 
Sbjct: 662 ISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGL---SIANRAL--DAYQLFEET 716

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             K       T   ++  L K +  ++A I
Sbjct: 717 RLKGCSIHTKTCVALLDALHKAECLEQAAI 746



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 154/328 (46%), Gaps = 14/328 (4%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           GY  NV   T L+    + GR+  AL +LD+M       +I  YN  +     VG+V+ A
Sbjct: 91  GYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMA 150

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
           ++    +K +GL PD  TYT++M   CK  R +EA+E+  +  +    P    +NT+  G
Sbjct: 151 WKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMG 210

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           Y   G   +   LL+  + + C+P  ++Y+ +L  L K GK   A+ IF+EM R      
Sbjct: 211 YGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKR------ 264

Query: 330 ERMMN----SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
           + M N    +++ G+  K+      +E A++V + M +     +  T  I+I  L K +K
Sbjct: 265 DAMPNLPTYNIIIGMLCKAGN----VEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQK 320

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            DEA             P   TF ++I  L  +G++D A  +   M +  +IP+   Y  
Sbjct: 321 LDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTS 380

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           LI    + ++  D   +Y   ++ G  P
Sbjct: 381 LIRNFFKCDRKEDGHKMYKEMMRSGCSP 408



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 162/353 (45%), Gaps = 6/353 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K+  L E  D+   ++      + S +  L+ AL  + E +  +  F++    G   N 
Sbjct: 37  VKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNV 96

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
              + +IR +  +     A  ++D M  N +  ++  + + ++   K G++  A +   +
Sbjct: 97  HLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHE 156

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P+  TY  ++  LC   R++EA E+   ++ +   P  Y Y  ++ G+   G+
Sbjct: 157 MKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGK 216

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA  LL     +G  P+VV +N +     K+G   K + + + M KR+ +P+  +Y+ 
Sbjct: 217 FDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNI 275

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           ++  L K G +  A  +   M   G   + R +N ++  LC     +   L++A  +FE 
Sbjct: 276 IIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLC-----KAQKLDEACSIFEG 330

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           M  KV   D  T+  +I  LGK  + D+A       ++   IP  + + ++I+
Sbjct: 331 MDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIR 383



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 128/280 (45%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +KA   +E  +++ ++K  G       +N ++       +   A +   E  + G  P  
Sbjct: 456 VKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTV 515

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+  ++      +   EA  + +    NG   N   ++ L++   K GR+ EA  V+++
Sbjct: 516 VTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEE 575

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + G  PN+ T+NCLL GL     + EA     ++K+    P+  TY  +++G CKV +
Sbjct: 576 MMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRK 635

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            N+A     E  ++G+ PN +T+  + +G  K G   +   L +  +    +PD  SY+ 
Sbjct: 636 FNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNA 695

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           ++ GL    +   A  +F+E    G  +  +   +LL  L
Sbjct: 696 MIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDAL 735


>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
          Length = 472

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 194/417 (46%), Gaps = 28/417 (6%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQET-------AVKFFSEASSYG-----LAPNSWTFSI 125
           + GT     D N  L AL               AV  F+ A+S       L+P S+T++I
Sbjct: 23  RRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPRVLSPTSYTYAI 82

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL-DQMGRI 184
           ++ C    +    A      +   G   +    + L+   C++ R  EAL++L  +   +
Sbjct: 83  LMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPEL 142

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDGFCKVGRSN 242
           GC P++ +YN LLK LC  G+  +A  +L  +   G    PDV  Y  V+DGF K G  N
Sbjct: 143 GCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVN 202

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           +A +L  E ++RG+ P++VT+N++ +  CK     K    L+ M  +  LP+  +Y+ L+
Sbjct: 203 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 262

Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
            G    G+ + AV +FKEM R     D   ++ L+  LC     +   +++A  VF+ M 
Sbjct: 263 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLC-----KYGKIKEARDVFDTMA 317

Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGE 418
            K    D  +Y I++     G  T   L+ +    ++    G  P   TFN  I+A    
Sbjct: 318 MKGQNPDVFSYNIML----NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANC 373

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           G +DKA+++   M +H   P   +Y  +I  L ++ K  DA   +   + QGV P +
Sbjct: 374 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 430



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 166/355 (46%), Gaps = 14/355 (3%)

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN----GYHPN 154
           +  E A+ FF +    GL  ++   S +++ +C      EA   +D +       G  P+
Sbjct: 91  HRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA---LDILLHRTPELGCVPD 147

Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRIG--CKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           V ++ IL+ SLC  G+  +A  +L  M   G  C P++  YN ++ G    G V +A ++
Sbjct: 148 VFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDL 207

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G+ PD+ TY +V+   CK    ++A   L + + + V PN  T+N L  GY  
Sbjct: 208 FKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSS 267

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   + V + K M++ + LPD ++ S L+  L K+GKI+ A  +F  M   G   D   
Sbjct: 268 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 327

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N +L G     +  K  L D   +F+ M       D  T+ + I+        D+A+I 
Sbjct: 328 YNIMLNG-----YATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMII 382

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            +   + G  P  +T+  VI ALC  GK+D A+     M +    P + +Y+ LI
Sbjct: 383 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 437



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 123/248 (49%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  D+F  + + G    +  +N ++ AL      + A  F  +  +  + PN+W
Sbjct: 197 KEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNW 256

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  Y +   + EA +V   M  +   P+V T ++L+ SLCK G++KEA +V D M
Sbjct: 257 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 316

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ +YN +L G    G + +  ++   +  DG+ PD YT+   +  +   G  
Sbjct: 317 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGML 376

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++AM + NE  + GV P+VVT+ T+    C+ G     +     M  +   PDK +Y+ L
Sbjct: 377 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 436

Query: 302 LNGLLKWG 309
           + G    G
Sbjct: 437 IQGFCTHG 444



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 3/201 (1%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           NW+   +N+L+       + + AV+ F E   + + P+  T S+++   C      EAR 
Sbjct: 255 NWT---YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 311

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V D M   G +P+V ++ I++N     G L +  ++ D M   G  P+  T+N  +K   
Sbjct: 312 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYA 371

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             G +++A  +   +++ G+KPDV TY  V+   C++G+ ++AME  N+ I++GV P+  
Sbjct: 372 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 431

Query: 262 TFNTLFNGYCKEGTPMKGVGL 282
            +N L  G+C  G  +K  G+
Sbjct: 432 AYNCLIQGFCTHGILLKTQGI 452



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 119/257 (46%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +N ++       +   A   F E    G+ P+  T++ ++   C      +A   + 
Sbjct: 185 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLR 244

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M +    PN  T+  L+     +G+ KEA+ V  +M R    P++ T + L+  LC  G
Sbjct: 245 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 304

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +++EA ++   +   G  PDV++Y  +++G+   G   +  +L +  +  G+ P+  TFN
Sbjct: 305 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 364

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
                Y   G   K + +   M+     PD ++Y T++  L + GK+  A+  F +M+  
Sbjct: 365 VQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 424

Query: 325 GFEVDERMMNSLLRGLC 341
           G   D+   N L++G C
Sbjct: 425 GVAPDKYAYNCLIQGFC 441



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 5/262 (1%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           +P+   ++ +I  +  + D  +A  +   M   G  P++ T+  +V++LCK+  + +A  
Sbjct: 182 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEA 241

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
            L QM      PN  TYN L+ G    G+ +EA  +   ++   + PDV T + +M   C
Sbjct: 242 FLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLC 301

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G+  EA ++ +    +G  P+V ++N + NGY  +G  +    L  LM      PD  
Sbjct: 302 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 361

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +++  +      G +  A+ IF EM   G + D     +++  LC         ++DA +
Sbjct: 362 TFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC-----RIGKMDDAME 416

Query: 357 VFEKMTKKVSVTDPGTYGIVIR 378
            F +M  +    D   Y  +I+
Sbjct: 417 KFNQMIDQGVAPDKYAYNCLIQ 438


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 166/325 (51%), Gaps = 5/325 (1%)

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
            + E A + +      GL  N  T + +I   C  N+  EA KV+  M D+G   +  T+
Sbjct: 441 GKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITY 500

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
            I++   CK+ +++EA+++ D M + G KP++ T+N  L+  C +G+VE+   +L  +K+
Sbjct: 501 NIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKS 560

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +GLKPD+ TY  ++DG+CK    ++A + L E I+ G+ PN V +N L  GY + G+   
Sbjct: 561 EGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISD 620

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
            +G+L  MK     P  I+Y++L+  +   G +  A  IF + +    E+       +++
Sbjct: 621 AIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQ 680

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           G C     +   +++A   F++M  +    +  TY  ++    K    +EA       + 
Sbjct: 681 GFC-----KIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVS 735

Query: 399 MGHIPRTITFNNVIQALCGEGKIDK 423
            G +P T+++N +I   C    +DK
Sbjct: 736 SGIVPDTVSYNTLISGCCEVDSLDK 760



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 182/389 (46%), Gaps = 11/389 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLM-ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           I D +   G     S FN ++   L      +  ++   E  +  L PN    +  I+  
Sbjct: 378 ILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQEL 437

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C +    EA ++   +   G   N+ T   L++ LC+   +KEA +VL  M   G + + 
Sbjct: 438 CKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDR 497

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN +++  C   ++EEA ++  ++   G KPD++T+   +  +C +G+  + + LL++
Sbjct: 498 ITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQ 557

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G+ P++VT+ T+ +GYCK     K    L  + K    P+ + Y+ L+ G  + G 
Sbjct: 558 MKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGS 617

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK-MTKKVSVTD 369
           I  A+ +   M   G +      NSL+  +C        L+E+A ++F + + K + +  
Sbjct: 618 ISDAIGVLDTMKHNGIQPTPITYNSLMYWMC-----HAGLVEEAKEIFAQCILKNIELGV 672

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
            G Y I+I+   K  K DEA+++          P  +T+  ++ A C  G  ++A  L  
Sbjct: 673 IG-YTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFD 731

Query: 430 LMYEHAKIPSRTSYDMLIT---KLDQLEK 455
            M     +P   SY+ LI+   ++D L+K
Sbjct: 732 EMVSSGIVPDTVSYNTLISGCCEVDSLDK 760



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 122/243 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KAS ++E I + D + K G    +  FN  L A   L + E  +    +  S GL P+  
Sbjct: 509 KASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIV 568

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  +I  YC   D  +A K +  +  NG  PN   +  L+    ++G + +A+ VLD M
Sbjct: 569 TYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTM 628

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P   TYN L+  +C+ G VEEA E+        ++  V  YT ++ GFCK+G+ 
Sbjct: 629 KHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKI 688

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA+    E   R + PN +T+ TL   YCK G   +   L   M     +PD +SY+TL
Sbjct: 689 DEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTL 748

Query: 302 LNG 304
           ++G
Sbjct: 749 ISG 751



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 182/411 (44%), Gaps = 14/411 (3%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + +FD +   G   +V  +N +  AL    E E A +   E    G+  +   F+ ++
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 128 RCYCNKNDFFEA-RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
             +       +   ++I  M      PN    T  +  LCK G+ +EA E+   +   G 
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
             NI T N L+ GLC    ++EA ++L  + + G++ D  TY  ++   CK  +  EA++
Sbjct: 459 GVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQ 518

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L ++ I+RG  P++ TFNT    YC  G     + LL  MK     PD ++Y T+++G  
Sbjct: 519 LRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYC 578

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K   +  A     E+++ G   +  + N+L+ G     +     + DA  V + M     
Sbjct: 579 KAKDVHKANKYLIELIKNGLRPNAVIYNALIGG-----YGRNGSISDAIGVLDTMKHNGI 633

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAI----EMGHIPRTITFNNVIQALCGEGKID 422
              P TY  ++  +      +EA       I    E+G I  TI    +IQ  C  GKID
Sbjct: 634 QPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTI----IIQGFCKIGKID 689

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +A++    M+     P++ +Y  L+    +     +A  L+   +  G++P
Sbjct: 690 EAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVP 740



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 172/373 (46%), Gaps = 9/373 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD-NGYHPNVTTFTILV 162
           A   F E S+ G +P+  T +I++           ARKV   M D N   P+V T+T+++
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMI 223

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
            +LC++G +  A  +L ++ R G +P + TYN L+  LC  GRVEEA+++   +    L+
Sbjct: 224 KALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLR 283

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P + T+  +++G  +  R  E   +L E    G+TPN V +N L   +C+EG   + + L
Sbjct: 284 PSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRL 343

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
              M  +      ++Y+ +   L K G++  A  I  EM+  G  V   + NS++     
Sbjct: 344 FDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV----- 398

Query: 343 KSWEEKDL--LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            +W  +    L+   ++  +M  +    +       I+ L K  K +EA       +  G
Sbjct: 399 -AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKG 457

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
                 T N +I  LC    + +A  +L  M +      R +Y+++I    +  K  +A 
Sbjct: 458 LGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAI 517

Query: 461 ALYGAALKQGVIP 473
            L    +K+G  P
Sbjct: 518 QLRDDMIKRGFKP 530



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 135/276 (48%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE   +  ++   G  +    +N ++      ++ E A++   +    G  P+ +TF+ 
Sbjct: 478 MKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNT 537

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +R YCN     +   ++D M   G  P++ T+  +++  CK+  + +A + L ++ + G
Sbjct: 538 FLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNG 597

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN   YN L+ G    G + +A  +L  +K++G++P   TY ++M   C  G   EA 
Sbjct: 598 LRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAK 657

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E+  + I + +   V+ +  +  G+CK G   + V   K M  R+  P+K++Y+TL+   
Sbjct: 658 EIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAY 717

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
            K G    A  +F EMV  G   D    N+L+ G C
Sbjct: 718 CKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCC 753



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +  ++ AL    E + A    +E    G+ P   T+++++   C      EA ++  
Sbjct: 216 VYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKG 275

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M +    P++ TF IL+N L +  R  E   VL +M   G  PN   YN L+   C  G
Sbjct: 276 RMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREG 335

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
              EA  +   + + G+K  V TY  +    CK G    A ++L+E +  G+T +   FN
Sbjct: 336 HCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFN 395

Query: 265 TLFNGYCKEGTPMKGVG-------LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           ++   +      ++G G       L++ M  R   P+    +  +  L K GK   A  I
Sbjct: 396 SVVAWH------LRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEI 449

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           +  ++  G  V+    N+L+ GLC     + + +++A +V + M       D  TY I+I
Sbjct: 450 WFLVLGKGLGVNIATSNALIHGLC-----QGNNMKEATKVLKAMVDSGVEFDRITYNIMI 504

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
           +   K  K +EA+      I+ G  P   TFN  ++A C  GK++  L LL  M      
Sbjct: 505 QFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLK 564

Query: 438 PSRTSYDMLI 447
           P   +Y  +I
Sbjct: 565 PDIVTYGTII 574



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 173/422 (40%), Gaps = 41/422 (9%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  +     +   +++ G   +V  +N L+ AL      E A +         L P+  
Sbjct: 228 RAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIV 287

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF I+I        F E   V+  M   G  PN   +  L+   C+ G   EAL + D+M
Sbjct: 288 TFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEM 347

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML--------------------MNVKNDG- 220
              G K  + TYN + K LC  G +E A ++L                     +++  G 
Sbjct: 348 VSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGR 407

Query: 221 ---------------LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
                          LKP+    TA +   CK G+  EA E+    + +G+  N+ T N 
Sbjct: 408 LDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNA 467

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G C+     +   +LK M       D+I+Y+ ++    K  K+  A+ +  +M++ G
Sbjct: 468 LIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRG 527

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
           F+ D    N+ LR  C         +ED   + ++M  +    D  TYG +I    K K 
Sbjct: 528 FKPDLFTFNTFLRAYC-----NLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 582

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             +A  +L   I+ G  P  + +N +I      G I  A+ +L  M  +   P+  +Y+ 
Sbjct: 583 VHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNS 642

Query: 446 LI 447
           L+
Sbjct: 643 LM 644


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 216/478 (45%), Gaps = 14/478 (2%)

Query: 5   VPSNSFIFTNTN-RRNHNKIPQFNKLVVFAAASLSTAESLDLK-------ENPRSLQAQR 56
           V  N F + +   R +H+ +  +  L V +   L       L+       E P       
Sbjct: 182 VALNFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYV 241

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
            V   +A  L+  + +   ++K G   S+S  N  +  LV   + E A+KF       G+
Sbjct: 242 MVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGI 301

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P+  T++ +I+ YC+ N   +A ++I  +   G  P+  ++  ++  LCK  +++E   
Sbjct: 302 KPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKC 361

Query: 177 VLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           ++++M       P+  TYN L+  L   G  ++A   L   ++ G   D   Y+A++  F
Sbjct: 362 LMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSF 421

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           C+ GR +EA  L+ +   RG  P+VVT+  + +G+C+ G   +   +L+ M K  C P+ 
Sbjct: 422 CQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNT 481

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           +SY+ LLNGL   GK   A    +EM+    E      N++  G  M     +  L +A 
Sbjct: 482 VSYTALLNGLCHSGKSLEA----REMINVS-EEHWWTPNAITYGAVMHGLRREGKLSEAC 536

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            +  +M +K     P    ++I++L + +K  EA  +L   +  G     + F  VI   
Sbjct: 537 DLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGF 596

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           C  G ++ AL +L  MY   K P   +Y  L   L +  +  +A  L    L +G+ P
Sbjct: 597 CQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDP 654



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 168/341 (49%), Gaps = 7/341 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L      + A+ F  EA   G   +   +S ++  +C K    EA+ ++  M+
Sbjct: 379 YNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMY 438

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G +P+V T+T +V+  C+ GR+ EA ++L QM + GCKPN  +Y  LL GLC+ G+  
Sbjct: 439 SRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSL 498

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA EM+   +     P+  TY AVM G  + G+ +EA +L  E +E+G  P  V  N L 
Sbjct: 499 EAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLI 558

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
              C+    ++    L+    + C  + ++++T+++G  + G +  A+S+  +M   G  
Sbjct: 559 QSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKH 618

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D     +L   L      +K  L++A ++  KM  K     P TY  VI    +  + D
Sbjct: 619 PDAVTYTALFDAL-----GKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVD 673

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           + L  L   ++    P    +N VI+ LC  G +++A  LL
Sbjct: 674 DMLNLLEKMLKRQ--PFRTVYNQVIEKLCDFGNLEEAEKLL 712



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 197/410 (48%), Gaps = 6/410 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L++ +   + ++  G    +  +N L+     LN  E A++  +   S G  P+ 
Sbjct: 281 VKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDK 340

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCM-FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            ++  ++   C +    E + +++ M +++   P+  T+  L++ L K G   +AL  L 
Sbjct: 341 VSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLK 400

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +    G   +   Y+ ++   C  GR++EA  +++++ + G  PDV TYTA++DGFC++G
Sbjct: 401 EAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLG 460

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R +EA ++L +  + G  PN V++  L NG C  G  ++   ++ + ++    P+ I+Y 
Sbjct: 461 RIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYG 520

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            +++GL + GK+  A  + +EMV  GF      +N L++ LC     +   + +A +  E
Sbjct: 521 AVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLC-----QNQKVVEAKKYLE 575

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +   K    +   +  VI    +    + AL  L      G  P  +T+  +  AL  +G
Sbjct: 576 ECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKG 635

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           ++D+A  L+  M      P+  +Y  +I +  Q  +  D   L    LK+
Sbjct: 636 RLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR 685



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 157/323 (48%), Gaps = 14/323 (4%)

Query: 67  KERIDIFDSIKKD----GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           K R+D   S+  D    G N  V  +  ++     L   + A K   +   +G  PN+ +
Sbjct: 424 KGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVS 483

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ ++   C+     EAR++I+   ++ + PN  T+  +++ L + G+L EA ++  +M 
Sbjct: 484 YTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMV 543

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
             G  P     N L++ LC   +V EA + L    N G   +V  +T V+ GFC++G   
Sbjct: 544 EKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDME 603

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
            A+ +L++    G  P+ VT+  LF+   K+G   +   L+  M  +   P  ++Y +++
Sbjct: 604 AALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVI 663

Query: 303 NGLLKWGKIRPAVSIFKEMV-RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +   +WG++   +++ ++M+ R  F     + N ++  LC     +   LE+A ++  K+
Sbjct: 664 HRYSQWGRVDDMLNLLEKMLKRQPFRT---VYNQVIEKLC-----DFGNLEEAEKLLGKV 715

Query: 362 TKKVSVTDPGTYGIVIRT-LGKG 383
            +  S  D  T  +++ + L KG
Sbjct: 716 LRTASKVDANTCHVLMESYLKKG 738



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 144/300 (48%), Gaps = 11/300 (3%)

Query: 69  RID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           RID    I   + K G   +   +  LL  L    +   A +  + +  +   PN+ T+ 
Sbjct: 461 RIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYG 520

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            ++     +    EA  +   M + G+ P      +L+ SLC++ ++ EA + L++    
Sbjct: 521 AVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNK 580

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           GC  N+  +  ++ G C +G +E A  +L ++   G  PD  TYTA+ D   K GR +EA
Sbjct: 581 GCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEA 640

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
            EL+ + + +G+ P  VT+ ++ + Y + G     + LL+ M KR   P +  Y+ ++  
Sbjct: 641 AELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQ--PFRTVYNQVIEK 698

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L  +G +  A  +  +++R   +VD    + L     M+S+ +K +   AY+V  +M ++
Sbjct: 699 LCDFGNLEEAEKLLGKVLRTASKVDANTCHVL-----MESYLKKGVAISAYKVACRMFRR 753



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 7/246 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E  D+   + + G   +  + N L+ +L    +   A K+  E  + G A N   F+ 
Sbjct: 532 LSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTT 591

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C   D   A  V+D M+ +G HP+  T+T L ++L K GRL EA E++ +M   G
Sbjct: 592 VIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKG 651

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P   TY  ++      GRV++   +L  +     +P    Y  V++  C  G   EA 
Sbjct: 652 LDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEAE 709

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD-----KISYST 300
           +LL + +      +  T + L   Y K+G  +    +   M +RN  PD     K+S   
Sbjct: 710 KLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKL 769

Query: 301 LLNGLL 306
           +L+G L
Sbjct: 770 VLDGKL 775



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 2/191 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++  + + D +   G +     +  L  AL      + A +   +  S GL P   T+  
Sbjct: 602 MEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRS 661

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  Y       +   +++ M      P  T +  ++  LC  G L+EA ++L ++ R  
Sbjct: 662 VIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTA 719

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            K +  T + L++     G    AY++   +    L PD+     V       G+  EA 
Sbjct: 720 SKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEAD 779

Query: 246 ELLNEAIERGV 256
            L+   +ERG+
Sbjct: 780 NLMLRFVERGI 790



 Score = 38.5 bits (88), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 50/126 (39%)

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
           L + A +V   MT++     P  +G V+ +  +  K   AL  L    + G  P     N
Sbjct: 215 LCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICN 274

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
             I  L   GK++KAL  L  M      P   +Y+ LI     L +  DA  L      +
Sbjct: 275 TTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSK 334

Query: 470 GVIPQR 475
           G  P +
Sbjct: 335 GCPPDK 340


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 211/460 (45%), Gaps = 53/460 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +++    FD ++  G + +V  +  LL A +   +   A   F         PN+ 
Sbjct: 499 KAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAI 558

Query: 122 TFSIMIRCYCNKNDFFEARKVI------------DCMFD----NGYHPNVTTFTILVNSL 165
           T+S +I   C   +  +A +V             D  F+    +   PNV T+  LVN L
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGL 618

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK+ ++ +A ++LD M   GC+PN   Y+ L+ G C VG ++ A E+ + +   G  P V
Sbjct: 619 CKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSV 678

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           +TYT+++D   K GR + AM++L++ ++    PNVVT+  + +G CK G   K + LL L
Sbjct: 679 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSL 738

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC---- 341
           M+K+ C P+ ++Y+ L++GL K GK+   + +F +M   G   +      L+   C    
Sbjct: 739 MEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGL 798

Query: 342 ----------MKSWEEKDLLED--------------AYQVFEKMTKKVSVTDPGTYGIVI 377
                     MK       L+               +  + E+M    +      YG++I
Sbjct: 799 LDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLI 858

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITF------NNVIQALCGEGKIDKALLLLFLM 431
            +  K  + + AL  LH   EM  +  ++         ++IQALC   ++++A+ L   M
Sbjct: 859 DSFSKAGRLETAL-ELHK--EMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEM 915

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
                +P  +++  L+  L +  K  +A  L     ++GV
Sbjct: 916 RRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV 955



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 194/454 (42%), Gaps = 52/454 (11%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I + +  +G N S S FN L+       +   A K F+  ++ G  P    ++I I   C
Sbjct: 328 IINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSIC 387

Query: 132 NKNDFFE------ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            + +         A KV + M       N          LC  G+ ++A +++ +M R G
Sbjct: 388 GREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKG 447

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY  ++  LC   RV++A+ +   +K  G+ PDVYTYT ++D FCK G   +A 
Sbjct: 448 FVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQ 507

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
              +E    G +PNVVT+  L + Y K     +   +   M    C P+ I+YS L++GL
Sbjct: 508 SWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGL 567

Query: 306 LKWGKIRPAVSIFKEMV--------RFGFEVDER--------MMNSLLRGLC--MKSWEE 347
            K G+I+ A  ++ +++         F FE  +            +L+ GLC   K  + 
Sbjct: 568 CKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDA 627

Query: 348 KDLL----------------------------EDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
            DLL                            + A +VF +MTK   +    TY  +I  
Sbjct: 628 HDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDR 687

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           + K  + D A+  L   ++    P  +T+  ++  LC  G+ +KAL LL LM +    P+
Sbjct: 688 MFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPN 747

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y  LI  L +  K      L+     +G  P
Sbjct: 748 VVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAP 781



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 167/370 (45%), Gaps = 21/370 (5%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            ++   I   + + G     S +  ++  L      + A   F E    G+ P+ +T++I
Sbjct: 433 FEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTI 492

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +C      +A+   D M   G  PNV T+T L+++  KS +L +A ++  +M    
Sbjct: 493 LIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDA 552

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV----------------KNDGLKPDVYTYT 229
           C PN  TY+ L+ GLC  G +++A E+   +                  D + P+V TY 
Sbjct: 553 CYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYG 612

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           A+++G CK  + ++A +LL+  +  G  PN + ++ L +G+CK G       +   M K 
Sbjct: 613 ALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKC 672

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
             LP   +Y++L++ + K G++  A+ +  +M++     +     +++ GLC     EK 
Sbjct: 673 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEK- 731

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
               A  +   M KK    +  TY  +I  LGK  K D  L         G  P  +T+ 
Sbjct: 732 ----ALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYR 787

Query: 410 NVIQALCGEG 419
            +I   C  G
Sbjct: 788 ILINHCCAAG 797



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 173/416 (41%), Gaps = 65/416 (15%)

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           LM   + NE   A+ F          PN  T+  ++  +  K      +++I+ M   G 
Sbjct: 281 LMEASLFNE---AMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGC 337

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN----------------- 194
           +P+ + F  LV++ C +     A ++ ++M   GC P    YN                 
Sbjct: 338 NPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPEL 397

Query: 195 ---------------CLL---------KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
                          C+L         + LC VG+ E+A++++  +   G  PD  TYT 
Sbjct: 398 LDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTK 457

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           V+   C+  R ++A  L  E  + GV P+V T+  L + +CK G   +       M+   
Sbjct: 458 VITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAG 517

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           C P+ ++Y+ LL+  LK  ++  A  IF  MV      +    ++L+ GLC K+ E    
Sbjct: 518 CSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLC-KAGE---- 572

Query: 351 LEDAYQVFEKMT--------------KKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLH 394
           ++ A +V+ K+               K      P   TYG ++  L K +K  +A   L 
Sbjct: 573 IQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLD 632

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             +  G  P  I ++ ++   C  G+ID A  +   M +   +PS  +Y  LI ++
Sbjct: 633 AMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRM 688



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 139/324 (42%), Gaps = 18/324 (5%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
             +LV   C  G   EALE L ++   G +P+  TYN L++ L   G+VE A+ +   + 
Sbjct: 172 LNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMS 231

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G   D  T  +     CK GR  +A++LL          + V    + +G  +     
Sbjct: 232 ASGFCMDRSTVGSFAQALCKEGRWGDALDLLE---REDFKLDTVLCTQMISGLMEASLFN 288

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
           + +  L  M+  + +P+ ++Y TLL G LK  ++     I   M+  G      + NSL+
Sbjct: 289 EAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLV 348

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVIRTL-GKGKKTDEALIHLH 394
              C       +    AY++F +M        PG   Y I I ++ G+ +  +  L+ L 
Sbjct: 349 HTYC-----NAEDYAYAYKLFNRMN--TCGCPPGYVVYNIFIGSICGREELPNPELLDLA 401

Query: 395 HAIEMGHIPRTITFN-----NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
             +    +  +   N     N  + LCG GK +KA  ++  M     +P  ++Y  +IT 
Sbjct: 402 EKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITF 461

Query: 450 LDQLEKSYDACALYGAALKQGVIP 473
           L Q ++   A  L+    K GV P
Sbjct: 462 LCQAKRVDKAFLLFQEMKKVGVNP 485



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 92/406 (22%), Positives = 164/406 (40%), Gaps = 20/406 (4%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E ++    +K  G   S   +N L+  L    + E A +   E S+ G   +  T     
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFA 246

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           +  C +  + +A   +D +    +  +    T +++ L ++    EA+  L +M      
Sbjct: 247 QALCKEGRWGDA---LDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYI 303

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN+ TY  LL G     ++     ++  +  +G  P    + +++  +C       A +L
Sbjct: 304 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKL 363

Query: 248 LNEAIERGVTPNVVTFNTLFNGYC-KEGTPMKGVGLLKLMKK-------RNCLPDKISYS 299
            N     G  P  V +N      C +E  P     LL L +K        +C+ +KI+ +
Sbjct: 364 FNRMNTCGCPPGYVVYNIFIGSICGREELP--NPELLDLAEKVYEEMLVASCVLNKINTA 421

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
                L   GK   A  I KEM+R GF  D      ++  LC     +   ++ A+ +F+
Sbjct: 422 NFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLC-----QAKRVDKAFLLFQ 476

Query: 360 KMTKKVSVT-DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           +M KKV V  D  TY I+I +  K    ++A          G  P  +T+  ++ A    
Sbjct: 477 EM-KKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKS 535

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
            ++ +A  +   M   A  P+  +Y  LI  L +  +   AC +Y 
Sbjct: 536 KQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYA 581



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 121/306 (39%), Gaps = 37/306 (12%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     VD   K   +    ++F  + K G   SV  +  L+  +      + A+K 
Sbjct: 641 PNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 700

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            S+       PN  T++ M+   C   +  +A  ++  M   G  PNV T+T L++ L K
Sbjct: 701 LSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGK 760

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG----------------------- 204
           +G++   LE+  QM   GC PN  TY  L+   C  G                       
Sbjct: 761 AGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQG 820

Query: 205 ----------RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
                     R   +  +L  +++    P    Y  ++D F K GR   A+EL  E +E 
Sbjct: 821 YRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEV 880

Query: 255 GVTPNVVT---FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             + N+ +     +L    C      + V L   M++R  +PD  ++  L+ GL++  K 
Sbjct: 881 SSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKW 940

Query: 312 RPAVSI 317
             A+ +
Sbjct: 941 NEALQL 946


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 189/451 (41%), Gaps = 68/451 (15%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +N    AL+   + E A + F E     L P+S T+ I+IR  CN      A  + 
Sbjct: 89  TVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLY 148

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK---------------- 187
           + M D G  P V T   L+N+LCKSG L+ AL   ++M  I C                 
Sbjct: 149 EEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRV 208

Query: 188 ---------------PNIQTYNCLLKGLCYVGRVEE------------------------ 208
                          PN  TY  ++ GL   G+V E                        
Sbjct: 209 DEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGGHC 268

Query: 209 -------AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
                  AY +L ++K  G + D  TY  ++ G C++   + A ELL E       P++ 
Sbjct: 269 KAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIF 328

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           T++ L  G C+     +   LL  ++   +C P+ +SY+TL++G  K  ++  A  +F E
Sbjct: 329 TYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLE 388

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           MV  G   D    ++L+RGLC           +A+   E+M  K  +     Y  VI  L
Sbjct: 389 MVTAGQHPDVVTYSTLIRGLC-----NAGRASEAHSYLEEMVGKKILPKVPVYSSVISGL 443

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            +  + D A       +  G  P    +N++I  LC  G++  A L +  M E    P  
Sbjct: 444 CRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDG 503

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGV 471
            +Y  LI  L +  ++ +AC LY  +L+QG+
Sbjct: 504 VTYGTLIVGLCRWSRTDEACDLYVRSLEQGI 534



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 179/399 (44%), Gaps = 9/399 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + +   + + +K+ G       +N L+     L E + A +   E  S    P+ +
Sbjct: 269 KAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIF 328

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T+ I+I   C      EAR ++  +  ++   PNV ++  L++   K+ R+ +A ++  +
Sbjct: 329 TYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLE 388

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P++ TY+ L++GLC  GR  EA+  L  +    + P V  Y++V+ G C+ G 
Sbjct: 389 MVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGE 448

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A  + +  +  G  PN+  +N+L  G CK G        +K M +R C PD ++Y T
Sbjct: 449 LDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGT 508

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+ GL +W +   A  ++   +  G E+ E   N ++  L          LE A +V   
Sbjct: 509 LIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASL--------RCLEQAQRVLRV 560

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           +    +      Y  VI +L K     EA   L   I  G  P   T + ++ A+C + K
Sbjct: 561 VLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDK 620

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
              A+  L  M      PS  +Y  L+  L +  K  +A
Sbjct: 621 AVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEA 659



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 171/351 (48%), Gaps = 10/351 (2%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
           ++ E   +   PN+WT++++I          EA +V+  M      P +  +T ++   C
Sbjct: 213 YYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEM----PVPTLANYTSVIGGHC 268

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K+G + +A  +L+ M R G + +  TYN L+ G C +  ++ AYE+L  +K++   PD++
Sbjct: 269 KAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIF 328

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAI-ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           TY  ++ G C+  R +EA +LL     E   TPNVV++NTL +G+ K         L   
Sbjct: 329 TYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLE 388

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M      PD ++YSTL+ GL   G+   A S  +EMV         + +S++ GLC ++ 
Sbjct: 389 MVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLC-RAG 447

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
           E    L+ A  VF+ M       +   Y  +I  L K  +  +A + +    E G  P  
Sbjct: 448 E----LDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDG 503

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           +T+  +I  LC   + D+A  L     E     S TS +++I  L  LE++
Sbjct: 504 VTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQA 554



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/430 (22%), Positives = 175/430 (40%), Gaps = 37/430 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA+ + +   +F  +   G +  V  ++ L+  L        A  +  E     + P   
Sbjct: 375 KAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVP 434

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            +S +I   C   +   A  V D M  NG  PN+  +  L+  LCK+GRL +A   + +M
Sbjct: 435 VYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEM 494

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK------------------- 222
              GC P+  TY  L+ GLC   R +EA ++ +     G++                   
Sbjct: 495 TERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQA 554

Query: 223 -------------PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
                        P  + Y  V++  CK     EA +LL + I  G+ P+  T + L   
Sbjct: 555 QRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGA 614

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
            C++   +  +  L+ M +    P   +YSTLLN L K GK   A  + + ++       
Sbjct: 615 MCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFP 674

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
           + +    L    + ++  +D +E+A  V +++  K  +     Y  +++ L + +     
Sbjct: 675 DELWYVGL----IAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMV 730

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
              L        +    TFN +IQ  C  G+ D+A+ +L  M +    PS      L+ +
Sbjct: 731 YELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM-KKVLTPSAAIIKFLVDE 789

Query: 450 LDQLEKSYDA 459
           L + E+  ++
Sbjct: 790 LARAEREQES 799



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 152/359 (42%), Gaps = 47/359 (13%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           +   V T+     +L ++G+ +EA  +  +       P+  TY  L++GLC  G+++ A 
Sbjct: 86  FRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLAC 145

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVG------------------------------- 239
            +   + + GL+P V T   +++  CK G                               
Sbjct: 146 SLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRA 205

Query: 240 -RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
            R +EA     E ++    PN  T+  + NG  K G   +   +L+ M     +P   +Y
Sbjct: 206 IRVDEACYYFEE-MKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMP----VPTLANY 260

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           ++++ G  K G +  A  + ++M R G++ D    N+L+ G C    +E D    AY++ 
Sbjct: 261 TSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHC--RLQEID---RAYELL 315

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA---LIHLHHAIEMGHIPRTITFNNVIQAL 415
           E+M     V D  TY I+I  L + K+  EA   L  L +  E    P  +++N +I   
Sbjct: 316 EEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRN--EDDCTPNVVSYNTLIDGF 373

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
               +++ A  L   M    + P   +Y  LI  L    ++ +A +     + + ++P+
Sbjct: 374 SKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPK 432


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 197/423 (46%), Gaps = 66/423 (15%)

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           L PN  T++ +I  YC ++   EA  + + M  +G+ P+V T++ ++N LCK G L EA 
Sbjct: 152 LEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAK 211

Query: 176 EVLDQMGRIGCKPNIQTY-----------------------------------NCLLKGL 200
            +L +M ++G  PN   Y                                     L+ GL
Sbjct: 212 ALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGL 271

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
              G+ +EA  M   +      P+  TYTA++DG+CK+G  + A  LL +  ++ V PNV
Sbjct: 272 FKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNV 331

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           VT++++ NGY K+G     V ++K M  +N +P+   Y+TL++G LK GK   AV ++ E
Sbjct: 332 VTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNE 391

Query: 321 MVRFGFE----VDERMMNSLLRGLCMKSWE-------EKDLLED---------------- 353
           M   G E    + +  +N+L RG  M+  E        K LL D                
Sbjct: 392 MKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGR 451

Query: 354 ---AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
              A+ + EKM +     D   Y ++I  L +  K D   ++     E+G  P   T+N 
Sbjct: 452 ESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAESVY-SGIRELGLAPDRATYNT 510

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I A C +GK++ A+ L   M  H+ +P+  + ++L+  L +  ++  A  +    L  G
Sbjct: 511 MINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWG 570

Query: 471 VIP 473
           + P
Sbjct: 571 ICP 573



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 164/375 (43%), Gaps = 6/375 (1%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           +Q+ AV  ++E    GL  NS+     I          EA  +   M   G   +   +T
Sbjct: 381 KQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYT 440

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L++   K+GR   A  + ++M   G K ++  YN L+ GL  +G+ + A  +   ++  
Sbjct: 441 SLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIREL 499

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           GL PD  TY  +++ +CK G+   A++L NE     V PN +T N L  G  K G   + 
Sbjct: 500 GLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERA 559

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + +L  M      P+   +  LLN   K  +    + + K +V  G + +  + NSL+  
Sbjct: 560 IDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITV 619

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC     ++  L     V   MTK+    D  TY  +I    K    ++AL      +  
Sbjct: 620 LCGLGMTKRATL-----VLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNE 674

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
           G  P   T+N ++  L   G + KA  +L  M +    P  + Y+ LI+   ++    +A
Sbjct: 675 GVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEA 734

Query: 460 CALYGAALKQGVIPQ 474
              Y   + +G++P+
Sbjct: 735 IKFYCEMVTKGLVPK 749



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 163/349 (46%), Gaps = 17/349 (4%)

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
           ++A  V   + + G  P+  T+  ++N+ CK G+L+ A+++ ++M      PN  T N L
Sbjct: 487 YDAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNIL 546

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           + GL   G  E A ++L  +   G+ P+V  + A+++   K  R++  +++    +  G+
Sbjct: 547 VGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGL 606

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
             N   +N+L    C  G   +   +L  M K     D ++Y+ L++G  K   I  A++
Sbjct: 607 KANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALA 666

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
            + +M+  G     R  N L     +       L+  AY++  KM       D   Y  +
Sbjct: 667 TYTQMLNEGVSPGIRTYNLL-----LGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTL 721

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I   GK     EA+      +  G +P+T T+N +I+     GK+D+A  LL  M     
Sbjct: 722 ISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRV 781

Query: 437 IPSRTSYDMLIT---------KLDQL-EKSY--DACALYGAALKQGVIP 473
            P+ ++YD+LI          +LD++ +K+Y  +A  L+    ++G +P
Sbjct: 782 PPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVP 830



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 165/365 (45%), Gaps = 16/365 (4%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            +SE  S G+ PN +T +I++  +C       A   +D + +     +  T+   +   C
Sbjct: 33  LYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLA---LDLIRNVDIDVDTVTYNTAIWGFC 89

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND------- 219
           + G   +    L  M +     +  T N L+KG C +G V+    ++ N+ +D       
Sbjct: 90  QQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGT 149

Query: 220 -GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
             L+P++ TYT ++  +CK    +EA+ L  E I  G  P+VVT++++ NG CK G   +
Sbjct: 150 TNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTE 209

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              LL+ M K    P+ + Y+ L++ L K G    +     +M+  G   D  +  +L+ 
Sbjct: 210 AKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLID 269

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           GL  K+ +     ++A  +F  + K   + +  TY  +I    K    D A   L    +
Sbjct: 270 GL-FKAGKS----DEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEK 324

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
              +P  +T++++I     +G +D A+ ++  M +   +P+   Y  LI    +  K   
Sbjct: 325 KQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDA 384

Query: 459 ACALY 463
           A  LY
Sbjct: 385 AVDLY 389



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 106/473 (22%), Positives = 197/473 (41%), Gaps = 64/473 (13%)

Query: 56  RFVDRIKASPLKERIDIF-DSIKKDGTNWSVSDFN----------DLLMALVMLN----- 99
           R +D++  +P      I  DS+ K G+ W    +           DL++   +++     
Sbjct: 215 REMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKA 274

Query: 100 -EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
            + + A   F   +     PN+ T++ MI  YC   D   A  ++  M      PNV T+
Sbjct: 275 GKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTY 334

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
           + ++N   K G L  A+ ++ +M      PN   Y  L+ G    G+ + A ++   +K 
Sbjct: 335 SSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKL 394

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +GL+ + +   A ++   +  +  EA  L    + +G+  + V + +L +G+ K G    
Sbjct: 395 NGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESA 454

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              + + M +     D ++Y+ L+NGLL+ GK   A S++  +   G   D    N+++ 
Sbjct: 455 AFTMAEKMAETGIKFDVVAYNVLINGLLRLGK-YDAESVYSGIRELGLAPDRATYNTMIN 513

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL-------- 390
             C     ++  LE+A +++ +M     + +  T  I++  L K  +T+ A+        
Sbjct: 514 AYC-----KQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLL 568

Query: 391 ------IHLHHA---------------------IEMGHIPRTITFNNVIQALCGEGKIDK 423
                 + +H A                     + MG       +N++I  LCG G   +
Sbjct: 569 WGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKR 628

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLIT---KLDQLEKSYDACALYGAALKQGVIP 473
           A L+L  M +        +Y+ LI    K   +EK   A A Y   L +GV P
Sbjct: 629 ATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEK---ALATYTQMLNEGVSP 678



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 6/347 (1%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           + + + G  + V  +N L+  L+ L + + A   +S     GLAP+  T++ MI  YC +
Sbjct: 460 EKMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQ 518

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
                A K+ + M  +   PN  T  ILV  L K+G  + A++VL++M   G  PN+  +
Sbjct: 519 GKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIH 578

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
             LL       R +   +M   +   GLK +   Y +++   C +G +  A  +LN   +
Sbjct: 579 RALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTK 638

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
            G++ + VT+N L +G+ K     K +     M      P   +Y+ LL GLL  G +  
Sbjct: 639 EGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSK 698

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A  I  +M   G + D  + N+L+ G   K   +K    +A + + +M  K  V    TY
Sbjct: 699 AYEILSKMKDSGLDPDASLYNTLISGHG-KIGNKK----EAIKFYCEMVTKGLVPKTSTY 753

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            ++I    K  K D+A   L+        P + T++ +I   C   K
Sbjct: 754 NVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSK 800



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 152/340 (44%), Gaps = 24/340 (7%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G  PNV T  ILV++ CK G L  AL+++     +    +  TYN  + G C  G 
Sbjct: 37  MLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRN---VDIDVDTVTYNTAIWGFCQQGL 93

Query: 206 VEEAYEML-MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI-----ERGVT-- 257
             + +  L + VK D    D +T   ++ GFC++G       +++  I     + G T  
Sbjct: 94  ANQGFGFLSIMVKKDTF-FDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNL 152

Query: 258 -PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            PN+VT+ TL + YCK+    + + L + M     LPD ++YS+++NGL K G +  A +
Sbjct: 153 EPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKA 212

Query: 317 IFKEMVRFGFEVDERMMNSLLRGL--CMKSWEEKDLLEDAYQVFEKMTKKVSVT-DPGTY 373
           + +EM + G   +  +   L+  L     +WE          +++       V+ D    
Sbjct: 213 LLREMDKMGVNPNHVVYAILVDSLFKAGSAWES--------FIYQSQMIVCGVSFDLVVC 264

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             +I  L K  K+DEA        ++  IP  IT+  +I   C  G +D A  LL  M +
Sbjct: 265 TTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEK 324

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              +P+  +Y  +I    +      A  +    L Q ++P
Sbjct: 325 KQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMP 364



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++  I++ G     + +N ++ A     + E A+K ++E   + + PNS T +I++    
Sbjct: 492 VYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLS 551

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              +   A  V++ M   G  PNVT    L+N+  K  R    L++  ++  +G K N +
Sbjct: 552 KAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANRE 611

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            YN L+  LC +G  + A  +L N+  +G+  D  TY A++ G  K     +A+    + 
Sbjct: 612 VYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQM 671

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +  GV+P + T+N L  G    G   K   +L  MK     PD   Y+TL++G  K G  
Sbjct: 672 LNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNK 731

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           + A+  + EMV  G        N L+     + + +   ++ A ++  +M  +    +  
Sbjct: 732 KEAIKFYCEMVTKGLVPKTSTYNVLI-----EDFAKVGKMDQARELLNEMQVRRVPPNSS 786

Query: 372 TYGIVI 377
           TY I+I
Sbjct: 787 TYDILI 792



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/329 (23%), Positives = 149/329 (45%), Gaps = 16/329 (4%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P +  +  L+     +G + +  ++  +M   G  PN+ T+N L+   C +G +  A ++
Sbjct: 9   PTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDL 68

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           + NV  D    D  TY   + GFC+ G +N+    L+  +++    +  T N L  G+C+
Sbjct: 69  IRNVDID---VDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCR 125

Query: 273 EGTPMKGVGLLKLM--------KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            G+   G  ++  +           N  P+ ++Y+TL++   K   +  A+S+++EM+  
Sbjct: 126 IGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISD 185

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           GF  D    +S++ GLC     ++ +L +A  +  +M K     +   Y I++ +L K  
Sbjct: 186 GFLPDVVTYSSIINGLC-----KRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAG 240

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
              E+ I+    I  G     +    +I  L   GK D+A  +   + +   IP+  +Y 
Sbjct: 241 SAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYT 300

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
            +I    +L     A +L     K+ V+P
Sbjct: 301 AMIDGYCKLGDMDGAESLLRDMEKKQVVP 329



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 127/292 (43%), Gaps = 15/292 (5%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P S+     V  + KA   +  ID+ + +   G   +V+    LL A       +T ++ 
Sbjct: 538 PNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQM 597

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
                  GL  N   ++ +I   C       A  V++ M   G   +  T+  L++   K
Sbjct: 598 HKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFK 657

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           S  +++AL    QM   G  P I+TYN LL GL   G + +AYE+L  +K+ GL PD   
Sbjct: 658 SSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASL 717

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y  ++ G  K+G   EA++   E + +G+ P   T+N L   + K G   +   LL  M+
Sbjct: 718 YNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQ 777

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRP-------------AVSIFKEMVRFGF 326
            R   P+  +Y  L+ G     K +P             A ++F EM   GF
Sbjct: 778 VRRVPPNSSTYDILICGWCNLSK-QPELDRISKKTYRTEARTLFAEMNEKGF 828



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 20/254 (7%)

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           ++   + P +  +  ++  F   G  ++  +L +E +  GV PNV T N L + +CK G 
Sbjct: 2   IRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGH 61

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
                  L L++  +   D ++Y+T + G  + G           MV+     D    N 
Sbjct: 62  LSLA---LDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNI 118

Query: 336 LLRGLC------MKSWEEKDLLEDAYQVFEKMTKKVSVT--DPG--TYGIVIRTLGKGKK 385
           L++G C         W   +L++D       M      T  +P   TY  +I    K   
Sbjct: 119 LVKGFCRIGSVKYGEWVMDNLIDD-------MNDDDGTTNLEPNLVTYTTLISAYCKQHG 171

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             EAL      I  G +P  +T++++I  LC  G + +A  LL  M +    P+   Y +
Sbjct: 172 LSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAI 231

Query: 446 LITKLDQLEKSYDA 459
           L+  L +   ++++
Sbjct: 232 LVDSLFKAGSAWES 245



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 94/230 (40%), Gaps = 23/230 (10%)

Query: 60  RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
             K+S +++ +  +  +  +G +  +  +N LL  L+       A +  S+    GL P+
Sbjct: 655 HFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPD 714

Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
           +  ++ +I  +    +  EA K    M   G  P  +T+ +L+    K G++ +A E+L+
Sbjct: 715 ASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLN 774

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +M      PN  TY+ L+ G C + +  E                       +D   K  
Sbjct: 775 EMQVRRVPPNSSTYDILICGWCNLSKQPE-----------------------LDRISKKT 811

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
              EA  L  E  E+G  P   T   + + + + G  +    +LK M KR
Sbjct: 812 YRTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDMYKR 861


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 174/363 (47%), Gaps = 22/363 (6%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A K + E    G+  N    S   RC C    F +A  VI  M   G+ P+ +T++ +
Sbjct: 169 DLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKV 228

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +  LC + ++++A ++  +M R G  P++  Y  L+   C  G +E+A      ++ DG 
Sbjct: 229 IGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGC 288

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P+V TYTA++  + K  + ++A E+    + +G TPN+VT+  L +G CK G   K   
Sbjct: 289 APNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQ 348

Query: 282 LLKLMKKRNC-----------------LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           + K+MKK N                   P+  +Y  L++GL K  +++ A  + K M   
Sbjct: 349 IYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVE 408

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G E +  + ++L+ G C     +   L++A +VF  M +     +  TY  +I  L K K
Sbjct: 409 GCEPNHVVYDALIDGCC-----KAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDK 463

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + D AL  L   +E    P  + +  +I  LC  GK D+A  L+ +M E    P+  +Y 
Sbjct: 464 RLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYT 523

Query: 445 MLI 447
            +I
Sbjct: 524 AMI 526



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 178/363 (49%), Gaps = 25/363 (6%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           S ++ ++  L   ++ E A + F E    G+AP+ + ++ +I  +C      +AR   D 
Sbjct: 223 STYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDE 282

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M  +G  PNV T+T L+++  KS ++ +A EV + M   GC PNI TY  L+ GLC  G+
Sbjct: 283 MERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGK 342

Query: 206 VEEAYEMLMNVKNDGLK-PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +E+A ++   +K + ++ PDV  +  V+D     G SNE              PNV T+ 
Sbjct: 343 IEKASQIYKIMKKENVEIPDVDMHFRVVD-----GASNE--------------PNVFTYG 383

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +G CK     +   LLK M    C P+ + Y  L++G  K GK+  A  +F  M+  
Sbjct: 384 ALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLEC 443

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G++ +    +SL+  L    +++K  L+ A +V  KM +     +   Y  +I  L K  
Sbjct: 444 GYDPNVYTYSSLIDRL----FKDKR-LDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVG 498

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           KTDEA   +    E G  P  +T+  +I      G+++K L LL  M      P+  +Y 
Sbjct: 499 KTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYR 558

Query: 445 MLI 447
           +LI
Sbjct: 559 VLI 561



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 190/403 (47%), Gaps = 26/403 (6%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           AS +++   +F  +K++G    V  +  L+ +       E A  +F E    G APN  T
Sbjct: 235 ASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVT 294

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  Y       +A +V + M   G  PN+ T+T L++ LCK+G++++A ++   M 
Sbjct: 295 YTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMK 354

Query: 183 R-----------------IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           +                    +PN+ TY  L+ GLC   +V+EA ++L ++  +G +P+ 
Sbjct: 355 KENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNH 414

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
             Y A++DG CK G+ +EA E+    +E G  PNV T+++L +   K+      + +L  
Sbjct: 415 VVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSK 474

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M + +C P+ + Y+ +++GL K GK   A  +   M   G   +     +++ G      
Sbjct: 475 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGR 534

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            EK L     ++ ++M+ K    +  TY ++I         DEA   L   ++  + PR 
Sbjct: 535 VEKCL-----ELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAH-KLLEEMKQTYWPRH 588

Query: 406 IT-FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +  +  VI+    E     +L L F + E+  +P    Y +LI
Sbjct: 589 VAGYRKVIEGFNRE--FIASLYLSFEISENDSVPVAPVYRVLI 629



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 174/408 (42%), Gaps = 66/408 (16%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYC-NKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           E A+ F +   +    PN  T+ I++ C C NK      ++++  M   G +P+   F  
Sbjct: 59  EEAMDFLTRMRASSCLPNVLTYRILL-CGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG--------------------- 199
           LV++ C+SG    A ++L +M + GC+P    YN L+ G                     
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 200 -------------------LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
                              LC +G+ E+AY ++  + + G  PD  TY+ V+   C   +
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             +A +L  E    G+ P+V  + TL + +CK G   +       M++  C P+ ++Y+ 
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++  LK  K+  A  +++ M+  G   +     +L+ GLC     +   +E A Q++ K
Sbjct: 298 LIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLC-----KAGKIEKASQIY-K 351

Query: 361 MTKKVSVTDPG------------------TYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
           + KK +V  P                   TYG ++  L K  +  EA   L      G  
Sbjct: 352 IMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCE 411

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           P  + ++ +I   C  GK+D+A  +   M E    P+  +Y  LI +L
Sbjct: 412 PNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRL 459



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 163/350 (46%), Gaps = 15/350 (4%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +  L+  L    + + A       S  G  PN   +  +I   C      EA++V 
Sbjct: 378 NVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVF 437

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M + GY PNV T++ L++ L K  RL  AL+VL +M    C PN+  Y  ++ GLC V
Sbjct: 438 TTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKV 497

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G+ +EAY++++ ++  G  P+V TYTA++DGF K GR  + +ELL +   +G  PN VT+
Sbjct: 498 GKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTY 557

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             L N  C  G   +   LL+ MK+         Y  ++ G  +          F   + 
Sbjct: 558 RVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNRE---------FIASLY 608

Query: 324 FGFEVDER---MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT--KKVSVTDPGTYGIVIR 378
             FE+ E     +  + R L + ++ +   LE A ++ E+++     S  +   +  +I 
Sbjct: 609 LSFEISENDSVPVAPVYRVL-IDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIE 667

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            L    K D+A       I  G IP      ++I+ L    + ++AL LL
Sbjct: 668 NLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLL 717



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 151/368 (41%), Gaps = 49/368 (13%)

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           S+ G   + +T        C    + EA  +++      + P+   +T +++ LC++   
Sbjct: 2   STMGYRMDEFTLGCFAHSLCKSGKWREALSLLE---KEEFVPDTVLYTKMISGLCEASLF 58

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
           +EA++ L +M    C PN+ TY  LL G     ++     +L  +  +G  P    + ++
Sbjct: 59  EEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSL 118

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK------------- 278
           +  +C+ G    A +LL + ++ G  P  V +N L  G C    P K             
Sbjct: 119 VHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEM 178

Query: 279 --------------------GVG-------LLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
                               G+G       +++ M  +  +PD  +YS ++  L    K+
Sbjct: 179 LEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKV 238

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +F+EM R G   D  +  +L+   C   +     +E A   F++M +     +  
Sbjct: 239 EKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGF-----IEQARNWFDEMERDGCAPNVV 293

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I    K +K  +A       +  G  P  +T+  +I  LC  GKI+KA  +  +M
Sbjct: 294 TYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIM 353

Query: 432 -YEHAKIP 438
             E+ +IP
Sbjct: 354 KKENVEIP 361



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 139/296 (46%), Gaps = 5/296 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L E  ++F ++ + G + +V  ++ L+  L      + A+K  S+      APN  
Sbjct: 426 KAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVV 485

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ MI   C      EA K++  M + G +PNV T+T +++   KSGR+++ LE+L QM
Sbjct: 486 IYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQM 545

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC PN  TY  L+   C  G ++EA+++L  +K       V  Y  V++GF +    
Sbjct: 546 SSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNR--EF 603

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN--CLPDKISYS 299
             ++ L  E  E    P    +  L + + K G     + L + +   +     ++  + 
Sbjct: 604 IASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHI 663

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDA 354
           TL+  L    K   A  ++ +M+  G   +  ++  L++GL  +  WEE   L D+
Sbjct: 664 TLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDS 719


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 192/426 (45%), Gaps = 72/426 (16%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N LL AL+   +   A  F  E  S GL  N+   S+ I  YC++ +     K++  M  
Sbjct: 190 NSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKY 249

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG---------------CK------ 187
            G  P+V  +TI+++SLCK   LKEA  +L +M ++G               CK      
Sbjct: 250 LGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEE 309

Query: 188 -----------PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
                      PNI  +N  +  LC  G + +A ++  ++   GL PD ++YT +M G+C
Sbjct: 310 AMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYC 369

Query: 237 KVGRSNEAMELLNEAIERGV-----------------------------------TPNVV 261
           KV   + A++ L + ++RG+                                    P+VV
Sbjct: 370 KVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVV 429

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           ++NTL NGY K+G   K   LL +M+     PD ++Y+ L++GL+K G +  A  I  E+
Sbjct: 430 SYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDEL 489

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
            R GF  D     +++ G     +  K   E+A+ +F  M++     D  T   ++    
Sbjct: 490 TRRGFSPDVVTFTNIIGG-----FSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYC 544

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           + +   EA +  H  ++ G     I +N++I   C  G ID A  L+ +M EH  +P+  
Sbjct: 545 RTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNI 604

Query: 442 SYDMLI 447
           ++  L+
Sbjct: 605 THHALV 610



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 134/254 (52%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN  +  L        A K F +    GL P+ ++++ M+  YC   D   A K +  M 
Sbjct: 326 FNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKML 385

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V T+T+L++S CK G ++ A  +  +M   G  P++ +YN L+ G    G ++
Sbjct: 386 KRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQ 445

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A+E+L  +++ G+ PD+ TY  ++ G  K G  NEA ++L+E   RG +P+VVTF  + 
Sbjct: 446 KAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNII 505

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G+  +G   +   L   M + +  PD ++ S LLNG  +   +  A  +F +M+  G +
Sbjct: 506 GGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLK 565

Query: 328 VDERMMNSLLRGLC 341
            D  + NSL+ G C
Sbjct: 566 ADVILYNSLIHGFC 579



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 172/421 (40%), Gaps = 80/421 (19%)

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            + +++ CY  +N    A K+I  M      P +     L+ +L +S +L  A + L +M
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM--------- 232
              G   N    +  + G C  G ++  +++LM +K  G+KPDV  YT V+         
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLL 272

Query: 233 --------------------------DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
                                     DG+CKVG+S EAM++L       ++PN+  FN+ 
Sbjct: 273 KEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFVFNSF 329

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG----------------LLKWGK 310
            +  C +G  +K   + + M +   +PD  SY+T++ G                +LK G 
Sbjct: 330 ISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRG- 388

Query: 311 IRPAVS--------------------IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
           IRP+V+                    +F+ M+  G   D    N+L+ G     + +K  
Sbjct: 389 IRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNG-----YGKKGH 443

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           L+ A+++   M       D  TY I+I  L K    +EA   L      G  P  +TF N
Sbjct: 444 LQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTN 503

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I     +G  ++A LL F M EH   P   +   L+    +     +A  L+   L  G
Sbjct: 504 IIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAG 563

Query: 471 V 471
           +
Sbjct: 564 L 564



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/397 (22%), Positives = 172/397 (43%), Gaps = 30/397 (7%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G+  +V     ++  LV  N    A+       SY      W  +I ++ +    +    
Sbjct: 92  GSKHTVESVCTMIHILVSGNMNHKAMDLLLHLISYNSGEEGW-HNIFLKIH----ETHTK 146

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
           R+V++           T + +LVN   K    + AL+++ +M  +   P I   N LLK 
Sbjct: 147 RRVLE-----------TVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKA 195

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           L    ++  A++ L  +K+ GL  +    +  + G+C  G  +   +LL E    G+ P+
Sbjct: 196 LLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPD 255

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VV +  + +  CK     +   +L  M +     D +S S++++G  K GK   A+ + +
Sbjct: 256 VVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLE 315

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
               F    +  + NS +  LC     + ++L+ A +VF+ M +   + D  +Y  ++  
Sbjct: 316 ---VFNLSPNIFVFNSFISKLC----TDGNMLKAA-KVFQDMCEMGLIPDCFSYTTMMAG 367

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
             K K    AL +L   ++ G  P   T+  +I + C  G ++ A  L   M     +P 
Sbjct: 368 YCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPD 427

Query: 440 RTSYDMLIT---KLDQLEKSYDACALYGAALKQGVIP 473
             SY+ L+    K   L+K+++  ++  +A   GV P
Sbjct: 428 VVSYNTLMNGYGKKGHLQKAFELLSMMRSA---GVSP 461



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 3/152 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK   + E  DI D + + G +  V  F +++         E A   F   S + L P+ 
Sbjct: 474 IKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDV 533

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T S ++  YC      EA  +   M D G   +V  +  L++  C  G + +A  ++  
Sbjct: 534 VTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSM 593

Query: 181 MGRIGCKPNIQTYNCLLKGL---CYVGRVEEA 209
           M   G  PN  T++ L+ G    C    VE A
Sbjct: 594 MIEHGIMPNNITHHALVLGYEKKCVENPVERA 625


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 179/363 (49%), Gaps = 12/363 (3%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
            + +K  G +     F  L+ A   +   E AV+ F     +   P+ +T+++++R    
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMR 174

Query: 133 KNDFFE-ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           ++ FF  A  V + M      PN+ TF IL++ L K GR  +A ++ D M   G  PN  
Sbjct: 175 EDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L+ GLC  G  E+A ++   +K  G  PD   + A++DGFCK+GR  EA ELL   
Sbjct: 235 TYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            + G    +  +++L +G  +     +   L   M KRN  PD I Y+ L+ GL K GKI
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKI 354

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ + + M   G   D    N++++ LC +      LLE+   +  +M++  S  D  
Sbjct: 355 EDALKLLRSMPSKGITPDTYCYNAVIKALCGRG-----LLEEGRSLQLEMSETESFPDAC 409

Query: 372 TYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           T+ I+I ++   G  +K +E  + +  +   G  P   TFN +I  LC  G++ +A LLL
Sbjct: 410 THTILICSMCRNGLVRKAEEIFLEIEKS---GCSPSVATFNALIDGLCKSGELKEARLLL 466

Query: 429 FLM 431
             M
Sbjct: 467 HKM 469



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 193/404 (47%), Gaps = 21/404 (5%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +++ + K   + ++  F  L+  L        A K F + +  G++PN  T++I+I   C
Sbjct: 185 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 244

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    +ARK+   M  +G +P+      L++  CK GR+ EA E+L    + G    ++
Sbjct: 245 QRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 304

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            Y+ L+ GL    R  +A+E+  N+    +KPD+  YT ++ G  K G+  +A++LL   
Sbjct: 305 GYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSM 364

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             +G+TP+   +N +    C  G   +G  L   M +    PD  +++ L+  + + G +
Sbjct: 365 PSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 424

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           R A  IF E+ + G        N+L+ GLC KS E    L++A  +  KM     V  P 
Sbjct: 425 RKAEEIFLEIEKSGCSPSVATFNALIDGLC-KSGE----LKEARLLLHKM----EVGRPA 475

Query: 372 TYGIVIRTLGKGKKTDEALIH----------LHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           +  + +R    G ++ + ++           L H  + G+ P  +++N +I   C EG I
Sbjct: 476 S--LFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDI 533

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           D AL LL ++      P   +Y+ LI  L ++ +  +A  L+ A
Sbjct: 534 DGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA 577



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 192/443 (43%), Gaps = 56/443 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  ++    +KDG    +  ++ L+  L        A + ++      + P+  
Sbjct: 280 KLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDII 339

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++I+I+         +A K++  M   G  P+   +  ++ +LC  G L+E   +  +M
Sbjct: 340 LYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEM 399

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P+  T+  L+  +C  G V +A E+ + ++  G  P V T+ A++DG CK G  
Sbjct: 400 SETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGEL 459

Query: 242 NEAMELLNEA---------------------------------------IERGVTPNVVT 262
            EA  LL++                                         + G +P++V+
Sbjct: 460 KEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVS 519

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           +N L NG+C+EG     + LL +++ +   PD ++Y+TL+NGL + G+   A  +F    
Sbjct: 520 YNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA-- 577

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
               + D R   ++ R L   S   + LL  A+ ++ K  KK+S  D  T   + +   +
Sbjct: 578 ----KDDFRHSPAVYRSLMTWSCRRRKLLV-AFNLWMKYLKKISCLDDETANEIEQCFKE 632

Query: 383 GKKTDEALIHLHHAIEMGHIPRTIT---FNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           G +T+ AL  L   IE+      +T   +   +  LC  G+  +AL++  ++ E   + +
Sbjct: 633 G-ETERALRRL---IELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVT 688

Query: 440 RTSYDMLI---TKLDQLEKSYDA 459
             S   LI    K +QL+ + D 
Sbjct: 689 PPSCVKLIHGLCKREQLDAAIDV 711



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 145/330 (43%), Gaps = 41/330 (12%)

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           +F ++++ L +        + L+++   G   +   +  L+     +G  E+A E    +
Sbjct: 94  SFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRM 153

Query: 217 KNDGLKPDVYTYTAV------------------------------------MDGFCKVGR 240
           K    +PDV+TY  +                                    MDG  K GR
Sbjct: 154 KEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           +++A ++ ++   RG++PN VT+  L +G C+ G+P     L   MK     PD ++++ 
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNA 273

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LL+G  K G++  A  + +   + GF +  R  +SL+ GL       +     A++++  
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQ-----AFELYAN 328

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M K+    D   Y I+I+ L K  K ++AL  L      G  P T  +N VI+ALCG G 
Sbjct: 329 MLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGL 388

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +++   L   M E    P   ++ +LI  +
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSM 418



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 138/332 (41%), Gaps = 49/332 (14%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE------ASSYGLAPNSW--T 122
           +IF  I+K G + SV+ FN L+  L    E + A     +      AS +    +S   +
Sbjct: 429 EIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRS 488

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           F  M++         +A K +    D G  P++ ++ +L+N  C+ G +  AL++L+ + 
Sbjct: 489 FDTMVQ----SGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQ 544

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC------ 236
             G  P+  TYN L+ GL  VGR EEA+++      D  +     Y ++M   C      
Sbjct: 545 LKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRRRKLL 602

Query: 237 ----------------------------KVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
                                       K G +  A+  L E   R     +  +     
Sbjct: 603 VAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLI 662

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G C+ G   + + +  +++++  L    S   L++GL K  ++  A+ +F   +   F++
Sbjct: 663 GLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIDVFLYTLDNNFKL 722

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
             R+ N LL  L ++S E+ +++       E+
Sbjct: 723 MPRVCNYLLSSL-LQSREKMEIVSQLTNRMER 753



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 47/227 (20%), Positives = 81/227 (35%), Gaps = 39/227 (17%)

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           + L E    GV+ +   F  L + Y K G   K V     MK+ +C PD  +Y+ +L  +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIM 172

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
           ++                                       E      A+ V+ +M K  
Sbjct: 173 MR---------------------------------------EDVFFMLAFAVYNEMLKCN 193

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              +  T+GI++  L K  +T +A          G  P  +T+  +I  LC  G  + A 
Sbjct: 194 CSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDAR 253

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            L + M      P   +++ L+    +L +  +A  L     K G +
Sbjct: 254 KLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV 300


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 204/442 (46%), Gaps = 50/442 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           + S   E + +F  +   G  +  + +  ++  L        A++   E S     P  +
Sbjct: 31  RRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELSGV-YTPTVF 89

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C  +   +A KV++ M +    PNV T+TIL+N LC+S + K A EV  +M
Sbjct: 90  IYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEM 149

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R GCKPN  TY  L++ L   G ++EA  +++  ++  L  DV T T ++ G CK  R 
Sbjct: 150 KRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRL 209

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGY------------------------------- 270
           ++A++ + E  + GV PN VT++ L +G+                               
Sbjct: 210 DDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPG 269

Query: 271 -----CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
                CK G   +    ++ +++   +PD ++YS L+N   + G+   ++ + ++M R G
Sbjct: 270 YLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNG 329

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            + D    ++L+  LC    E K   +DA+++ E M    S  +  TY  V+  L K  K
Sbjct: 330 VKPDVVTYSTLINVLC---KERK--FQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384

Query: 386 TDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
            DE    +H   EM       P  +T++ ++  L   G +D A+ L  L+    + P   
Sbjct: 385 MDE----VHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAA 440

Query: 442 SYDMLITKLDQLEKSYDACALY 463
           +Y M+IT L +  K  +AC +Y
Sbjct: 441 AYSMVITSLCRAGKLEEACGMY 462



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 185/403 (45%), Gaps = 18/403 (4%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A+ L ER     S+ + G       F  L   L   ++    V+ F+  +S G+     T
Sbjct: 2   AAKLLER-----SVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETT 56

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           + +++   C      +A +++       Y P V  +  ++  LC++ R+ +A +VL++M 
Sbjct: 57  YKLVVDGLCGAGMANQALELVR-ELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMV 115

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
                PN+ TY  LL GLC   + + A E+   +K +G KP+  TY  ++    + G  +
Sbjct: 116 EESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEID 175

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA+ ++ E     +  +V+T  T+  G CK       +  ++ M++    P++++YS L+
Sbjct: 176 EALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLV 235

Query: 303 NGLLKWGKIRPAVSIFKE-MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +G  + G++   +  F+E   R G  ++       L  LC   +     L+ A +  E++
Sbjct: 236 HGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGY-----LDRARKSVEEL 290

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +   V D  TY ++I T  +  + D +L  L      G  P  +T++ +I  LC E K 
Sbjct: 291 RQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKF 350

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLIT------KLDQLEKSYD 458
             A  LL LM      P+  +Y+ ++       K+D++ + Y+
Sbjct: 351 QDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYE 393



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 158/306 (51%), Gaps = 4/306 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY-GLAPNS 120
           KAS L + +   + +++ G   +   +++L+       E +  ++FF E  +  G +  +
Sbjct: 205 KASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEA 264

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             +   +   C       ARK ++ +  +G  P+V T+++L+N+  ++G+   +LE+L+ 
Sbjct: 265 AAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLED 324

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G KP++ TY+ L+  LC   + ++A+ +L  ++  G  P+V TY +VMDG CK G+
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +E   +    ++   +P+VVT++ + NG  K G     V L +L+K     PD  +YS 
Sbjct: 385 MDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSM 444

Query: 301 LLNGLLKWGKIRPAVSIFKEM-VRFGFEVDERMMNSLLRGLC--MKSWEEKDLLEDAYQV 357
           ++  L + GK+  A  ++  M V    +   R +  L+  LC   ++   + ++E A + 
Sbjct: 445 VITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSARRIVEVARER 504

Query: 358 FEKMTK 363
             ++TK
Sbjct: 505 GHRVTK 510


>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
 gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
          Length = 455

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 188/401 (46%), Gaps = 7/401 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + + ++++G   +   +N L+  L M      +++   +    GL PN +T+S ++  
Sbjct: 40  MQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEA 99

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
              +    EA K++D +   G+ PN+ ++ +L+  LCK GR +EA+     +   G  PN
Sbjct: 100 AYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPN 159

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + +YN +L+ LC+ GR EEA ++L  + ++   P + TY  ++      GR   A E+L+
Sbjct: 160 VVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLD 219

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E +     P+  T+N +    CKEG     +  L  M    C P++ +++ +   L K G
Sbjct: 220 EMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIA-VLCKQG 278

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++  A SI + +              ++  LC K          A+Q+  +MTK   V D
Sbjct: 279 RVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYP-----AFQLLYEMTKFGFVPD 333

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
           P TY  +IR L      DEAL       E  + P    FN +I   C  G+ D +L +L 
Sbjct: 334 PYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDILE 393

Query: 430 LMYEHAKIPSRTSYDMLITKL-DQLEKSYDACALYGAALKQ 469
           +M E    P+ T+Y +++  +  + EK   A  L    L+Q
Sbjct: 394 MMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKELLLRQ 434



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 170/336 (50%), Gaps = 6/336 (1%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +A +V++ M ++G  P+  ++T LVN+LCK G +  A++++++M   G   N  TYN L+
Sbjct: 3   KATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLV 62

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
           +GLC  G + ++ ++L  +   GL P+ +TY+ +++   K    NEAM+LL+E I +G  
Sbjct: 63  RGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQ 122

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PN+V++N L  G CKEG   + +   + +  +   P+ +SY+ +L  L   G+   A  +
Sbjct: 123 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQL 182

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             EM     + +ER  + +   + + S      +E A++V ++M +        TY  +I
Sbjct: 183 LAEM-----DSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPII 237

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L K  K D  +  L   I     P   TF N I  LC +G++ +A  ++  +    + 
Sbjct: 238 AHLCKEGKLDLVIKCLDQMIHHRCNPNEGTF-NAIAVLCKQGRVPEAFSIIQNLGNKQRS 296

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   Y  +IT L +   +Y A  L     K G +P
Sbjct: 297 STHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVP 332



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 172/362 (47%), Gaps = 29/362 (8%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+ P++ +++ ++   C + +   A ++++ M +NGY  N  T+  LV  LC  G L ++
Sbjct: 15  GIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQS 74

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L++LD++   G  PN  TY+ LL+       V EA ++L  +   G +P++ +Y  ++ G
Sbjct: 75  LQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTG 134

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK GR+ EA+    +   +G  PNVV++N +    C EG   +   LL  M      P 
Sbjct: 135 LCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPS 194

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------MKSWE 346
            ++Y+ L+  L   G+I  A  +  EMVR  F+      N ++  LC        +K  +
Sbjct: 195 LVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLD 254

Query: 347 E---------------------KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
           +                     +  + +A+ + + +  K   +    Y  VI +L +   
Sbjct: 255 QMIHHRCNPNEGTFNAIAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGN 314

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           T  A   L+   + G +P   T++++I+ LC EG +D+AL +  L+ E+   P   +++ 
Sbjct: 315 TYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNA 374

Query: 446 LI 447
           LI
Sbjct: 375 LI 376



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 103/208 (49%), Gaps = 1/208 (0%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++   ++ D + +     S + +N ++  L    + +  +K   +   +   PN  TF+ 
Sbjct: 211 IEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFN- 269

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            I   C +    EA  +I  + +         +  ++ SLC+ G    A ++L +M + G
Sbjct: 270 AIAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFG 329

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY+ L++GLC  G ++EA E+   ++ +  +P +  + A++ GFCK GR++ ++
Sbjct: 330 FVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSL 389

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKE 273
           ++L   +E+G TPN  T+  +  G   E
Sbjct: 390 DILEMMVEKGYTPNETTYTIIVEGIAHE 417



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 57/123 (46%)

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           ++ A +V E M +   + D  +Y  ++  L K      A+  +    E G+   T+T+N+
Sbjct: 1   MKKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNS 60

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +++ LC  G ++++L LL  +     +P+  +Y  L+    +     +A  L    + +G
Sbjct: 61  LVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKG 120

Query: 471 VIP 473
             P
Sbjct: 121 WQP 123


>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
 gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
          Length = 584

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 198/410 (48%), Gaps = 13/410 (3%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   +   IK  G   +V  +N LL AL    +   A    +E       PN  TF++
Sbjct: 170 IGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE----PNDVTFNV 225

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC +++F +A  +++  F  G+ P+V T T +V  LC  GR+ EA+E+L+++   G
Sbjct: 226 LICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKG 285

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
              ++  +N L+KG C  G+V+  + +L  ++  G  P+  TY A++ GFC+ G    A+
Sbjct: 286 GVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESAL 345

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK-RNCLPDKIS-YSTLLN 303
           ++ N+    G+  N VTF+TL  G    G    G  +L+LM++ R      IS Y+++L 
Sbjct: 346 DMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLY 405

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL +   +  A+    +M        +R +  L  G C     E+  +++A +V+++M  
Sbjct: 406 GLYRKNMLNEALEFLMKMENLFPRAVDRSLRIL--GFC-----EEGAIQEAKRVYDQMNN 458

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           +  +     Y  +I    +     EAL  ++  + +G+ P   TFN +I   C  GK   
Sbjct: 459 EGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGS 518

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           AL LL  M     +P   SY  LI  L + +    A +L    ++ G+ P
Sbjct: 519 ALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGITP 568



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 199/415 (47%), Gaps = 15/415 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFF-SEASSYGLAPNS 120
           +A  +++ I + D + + G N S+  FN +L  LV   + + A KF+  +    G+  + 
Sbjct: 96  RARMIRDVIKVLDLVTRYGKNPSLKIFNSILDVLVK-EDIDLARKFYRKKMMGAGIQGDD 154

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T+ I+++  C  N   E  K++  +   G  PNV  +  L+++LC +G++  A  ++++
Sbjct: 155 YTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNE 214

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           +     +PN  T+N L+ G C      +A  +L    + G  PDV T T V++  C VGR
Sbjct: 215 IK----EPNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGR 270

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA+E+L     +G   +VV  NTL  G+CK G    G GLLK M+++ CLP+  +Y+ 
Sbjct: 271 VTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNA 330

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G  + G +  A+ +F +M   G   +    ++L++GL  +        ED +++ E 
Sbjct: 331 LISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRT-----EDGFKILEL 385

Query: 361 M--TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           M  T+ V       Y  V+  L +    +EAL  L     +   PR +  +  I   C E
Sbjct: 386 MEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKMENL--FPRAVDRSLRILGFCEE 443

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G I +A  +   M     IPS   YD LI    Q     +A  L    +  G  P
Sbjct: 444 GAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFP 498



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 146/349 (41%), Gaps = 36/349 (10%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFND 90
           F  A +   +S  L   P  +   + V+ +     + E ++I + ++  G    V   N 
Sbjct: 236 FVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNT 295

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+       + +       E    G  PN+ T++ +I  +C       A  + + M  +G
Sbjct: 296 LIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDG 355

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQM--GRIGCKPNIQTYNCLLKGL-------- 200
            + N  TF  L+  L   GR ++  ++L+ M   R  C  +I  YN +L GL        
Sbjct: 356 INCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNE 415

Query: 201 -------------------------CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
                                    C  G ++EA  +   + N+G  P    Y  ++ GF
Sbjct: 416 ALEFLMKMENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGF 475

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           C+ G   EA+EL+NE +  G  P   TFN L +G+C+ G     + LL+ M  R C+PD 
Sbjct: 476 CQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDT 535

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            SYS L++ L +    + A S+  +MV  G   D  + NSL   L  ++
Sbjct: 536 GSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYLIWNSLFHCLSQQT 584



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 164/356 (46%), Gaps = 20/356 (5%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
           S S +  L+  L+      T      E   S GL P+   F  +IR         +  KV
Sbjct: 47  SQSTYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKV 106

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR-----IGCKPNIQTYNCLL 197
           +D +   G +P++  F  +++ L     +KE +++  +  R      G + +  TY  L+
Sbjct: 107 LDLVTRYGKNPSLKIFNSILDVL-----VKEDIDLARKFYRKKMMGAGIQGDDYTYGILM 161

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
           KGLC   R+ E +++L  +K+ GLKP+V  Y  ++   C  G+   A  L+NE  E    
Sbjct: 162 KGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE---- 217

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PN VTFN L  GYCKE   ++ + LL+       +PD ++ + ++  L   G++  AV I
Sbjct: 218 PNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEI 277

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
            + +   G  VD    N+L++G C     +   ++  + + ++M +K  + +  TY  +I
Sbjct: 278 LERVESKGGVVDVVAHNTLIKGFC-----KFGKVKLGHGLLKEMERKGCLPNADTYNALI 332

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
               +    + AL   +     G     +TF+ +I+ L   G+ +    +L LM E
Sbjct: 333 SGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEE 388


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 187/401 (46%), Gaps = 11/401 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +F+ + +        +FN +L +LV      T +    +    G+ PN    +I+I
Sbjct: 70  DAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILI 129

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
            C+C       A  V   +   GY+PN  TFT L+  LC  G++ +AL   D++  +G +
Sbjct: 130 NCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQ 189

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
            N  +Y  L+ GLC VG    A ++L  V    ++P+V  Y+ ++DG CK    N+A +L
Sbjct: 190 FNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDL 249

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
            +E + +G++PNVVT++ L +G+   G     V L   M   N  PD  +++ L++   K
Sbjct: 250 YSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCK 309

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GKI  A+ +  EM   G   +    +S+L  LC     +K     A  +  K+  +   
Sbjct: 310 SGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDK-----AVALLTKLKDQGIR 364

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            +  TY I+I  L    K ++A       +  G+    +T+  +    C +G  D+A  L
Sbjct: 365 PNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASAL 424

Query: 428 LFLMYEHAKIPSRTSYDMLITKL------DQLEKSYDACAL 462
           L  M E+  IP   +Y+++   L      D  EK +  C +
Sbjct: 425 LSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRECEI 465



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 168/361 (46%), Gaps = 9/361 (2%)

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
            +S   L P S T +     + + ND  +A  + +C+      P    F  ++ SL KS 
Sbjct: 46  SSSKINLIPYSSTSTT----FHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSK 101

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
                L +  +M   G KPN+   N L+   C +G +  A+ +   +   G  P+  T+T
Sbjct: 102 HYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFT 161

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++ G C  G+ ++A+   ++ +  G   N +++ TL +G CK G     + LL+ +  +
Sbjct: 162 TLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGK 221

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P+ + YST+++G+ K   +  A  ++ EMV  G   +    ++L+ G     +    
Sbjct: 222 LVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG-----FFTVG 276

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            L+DA  +F KM  +    D  T+ I++    K  K   AL  +    + G  P  +T++
Sbjct: 277 KLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYS 336

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
           +++ ALC   ++DKA+ LL  + +    P+  +Y +LI  L    K  DA  ++   L +
Sbjct: 337 SILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVK 396

Query: 470 G 470
           G
Sbjct: 397 G 397



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 116/216 (53%), Gaps = 1/216 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     +D + K   + +  D++  +   G + +V  ++ L+     + + + AV  
Sbjct: 225 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDL 284

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F++  S  + P+ +TF+I++  +C       A K++D M D G  PN+ T++ ++++LCK
Sbjct: 285 FNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 344

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           + R+ +A+ +L ++   G +PN+ TY  L+ GLC  G++E+A  +  ++   G    V T
Sbjct: 345 THRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVT 404

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           Y  +  GFCK G  +EA  LL++  E G  P+  T+
Sbjct: 405 YIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTY 440



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 161/365 (44%), Gaps = 49/365 (13%)

Query: 29  LVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERI----DIFDSIKKDGTNWS 84
           L+ FA +    A+ L +  NP ++    F   IK   LK +I    +  D +   G  ++
Sbjct: 137 LIPFAFSVF--AKILKMGYNPNTIT---FTTLIKGLCLKGQIHQALNFHDKLVALGFQFN 191

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
              +  L+  L  + E   A+          + PN   +S +I   C      +A  +  
Sbjct: 192 QISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYS 251

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G  PNV T++ L++     G+LK+A+++ ++M     KP++ T+N L+   C  G
Sbjct: 252 EMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSG 311

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           ++  A +++  + + G  P++ TY++++D  CK  R ++A+ LL +  ++G+ PN+ T+ 
Sbjct: 312 KISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYT 371

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +G C                                     GK+  A +IF++++  
Sbjct: 372 ILIDGLCTS-----------------------------------GKLEDARNIFEDLLVK 396

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G+++       +  G C     +K L ++A  +  KM +   + D  TY ++  +L K  
Sbjct: 397 GYDITVVTYIVMFYGFC-----KKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKG 451

Query: 385 KTDEA 389
           + D A
Sbjct: 452 ENDMA 456


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 159/337 (47%), Gaps = 6/337 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKE 173
           G+APN +T+  +I  +C      EA KV D M   G   P    +  L+   C  G+L  
Sbjct: 550 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 609

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           AL   D+M   G    + TYN L+  L   GR  EAYE++  +   GL PDV+TY  +++
Sbjct: 610 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 669

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G CK G   +A+E+      RGV   VVT+  L     K+G   +   L     +R   P
Sbjct: 670 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 729

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D + Y+ L+N     G I  A  I  EM +     D+   N+L+RGLC+        +++
Sbjct: 730 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLG-----RVDE 784

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A ++ ++MT++    D  TY  +I          +AL   +  +  G  P  +T+N +IQ
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            LC  G+ D A  ++  M E+   P  ++Y  LI  L
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 165/318 (51%), Gaps = 6/318 (1%)

Query: 102 ETAVKFFSEASSYG-LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           + AVK F E  + G + P +  ++ +I  YC++     A    D M + G    V T+ +
Sbjct: 572 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 631

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           LV++L   GR  EA E++++MG  G  P++ TYN L+ G C  G V++A E+  N+   G
Sbjct: 632 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 691

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           ++  V TYTA++    K G+  E  +L +EA+ RG+ P++V +N L N +   G   +  
Sbjct: 692 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 751

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            ++  M+K+   PD ++Y+TL+ GL   G++  A  +  EM   G + D    N+L+ G 
Sbjct: 752 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 811

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            MK       ++DA ++  +M  K       TY  +I+ L K  + D+A   +   +E G
Sbjct: 812 SMKG-----DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 866

Query: 401 HIPRTITFNNVIQALCGE 418
             P   T+ ++I+ L  E
Sbjct: 867 ITPDDSTYISLIEGLTTE 884



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 147/267 (55%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D + + G   +V+ +N L+ AL M      A +   E    GLAP+ +T++I+I  +C +
Sbjct: 615 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 674

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
            +  +A ++ + M   G    V T+T L+ +L K G+++E  ++ D+  R G +P++  Y
Sbjct: 675 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 734

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+      G ++ A+E++  ++   + PD  TY  +M G C +GR +EA +L++E  E
Sbjct: 735 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE 794

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RG+ P++VT+NTL +GY  +G     + +   M  +   P  ++Y+ L+ GL K G+   
Sbjct: 795 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 854

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGL 340
           A ++ KEMV  G   D+    SL+ GL
Sbjct: 855 AENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 208/484 (42%), Gaps = 51/484 (10%)

Query: 28  KLVVFAAASLSTAESL-DLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVS 86
           K V+ A  +LS    L  L   P SL            P    + ++  +K      S +
Sbjct: 399 KSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTA 458

Query: 87  DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
             + LL AL        A   F++     L   + TF+IM+R  C+      A +++  M
Sbjct: 459 SLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM 514

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGR 205
                 PN  T+  ++   C  GR++ AL+++ +M  R G  PN  TY  ++ G C VGR
Sbjct: 515 ----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGR 570

Query: 206 VEEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKVG------------------------- 239
           V+EA ++   +   G +KP+   Y A++ G+C  G                         
Sbjct: 571 VDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYN 630

Query: 240 ----------RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
                     R  EA EL+ E   +G+ P+V T+N L NG+CKEG   K + + + M +R
Sbjct: 631 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 690

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
                 ++Y+ L+  L K G+++    +F E VR G   D  + N+L+      S     
Sbjct: 691 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI-----NSHSTSG 745

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            ++ A+++  +M KK    D  TY  ++R L    + DEA   +    E G  P  +T+N
Sbjct: 746 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 805

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I     +G +  AL +   M      P+  +Y+ LI  L +  +  DA  +    ++ 
Sbjct: 806 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 865

Query: 470 GVIP 473
           G+ P
Sbjct: 866 GITP 869



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 155/320 (48%), Gaps = 6/320 (1%)

Query: 62  KASPLKERIDIFDSIKKDG-TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K   + E + +FD +   G        +N L+       + +TA+ +       G+A   
Sbjct: 567 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 626

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+++++          EA ++++ M   G  P+V T+ IL+N  CK G +K+ALE+ + 
Sbjct: 627 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 686

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G +  + TY  L+  L   G+V+E  ++       G++PD+  Y A+++     G 
Sbjct: 687 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 746

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A E++ E  ++ + P+ VT+NTL  G C  G   +   L+  M +R   PD ++Y+T
Sbjct: 747 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 806

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G    G ++ A+ I  EM+  GF       N+L++GLC          +DA  + ++
Sbjct: 807 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG-----DDAENMVKE 861

Query: 361 MTKKVSVTDPGTYGIVIRTL 380
           M +     D  TY  +I  L
Sbjct: 862 MVENGITPDDSTYISLIEGL 881



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 111/212 (52%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K+ ++IF+++ + G   +V  +  L+ AL    + +   K F EA   G+ P+  
Sbjct: 673 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 732

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  +    +   A +++  M      P+  T+  L+  LC  GR+ EA +++D+M
Sbjct: 733 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 792

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P++ TYN L+ G    G V++A  +   + N G  P + TY A++ G CK G+ 
Sbjct: 793 TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 852

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
           ++A  ++ E +E G+TP+  T+ +L  G   E
Sbjct: 853 DDAENMVKEMVENGITPDDSTYISLIEGLTTE 884


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 193/393 (49%), Gaps = 11/393 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN------KNDFF 137
           ++ +F  +  +LV +N   T +    +    G+  +    +I++ C+C+       +   
Sbjct: 7   TIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKVK 66

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           E     D +   G+  N  ++  L++ LCK+G  + A++VL  +  +  +PN+  Y+ ++
Sbjct: 67  ETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTII 126

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
             LC    V +A+++   +    + PDV TY  +M G   VGR  EA+ L N+ + + + 
Sbjct: 127 YSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIK 186

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P++ TFN L +G CKEG   K   +L +M K++  PD I+Y++L++G     +   A  +
Sbjct: 187 PDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFV 246

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F  M R G   D    + ++ GLC     +  ++++A  + ++M  K    +  TY  +I
Sbjct: 247 FNTMARRGVTPDVHSYSVMINGLC-----KTKMVDEAVNLLKEMHSKSMAPNTVTYSSLI 301

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L K  +  +A   ++     G     IT+N+++ ALC   ++DKA+ LL  + +    
Sbjct: 302 DGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQ 361

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           P   +Y +L+  L +  +  DA  +Y   L +G
Sbjct: 362 PDIYTYTILVDGLCKNGRLKDAQEVYQILLIKG 394



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 189/407 (46%), Gaps = 19/407 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE +   D +   G   +   +  L+  L    E   A++         + PN   +S 
Sbjct: 65  VKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYST 124

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C      +A  +   M      P+V T+  L+      GRLKEA+ + +QM    
Sbjct: 125 IIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKN 184

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            KP+I T+N L+ GLC  G +++A  +L  +    + PDV TY ++MDG+  V + N+A 
Sbjct: 185 IKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKAT 244

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + N    RGVTP+V +++ + NG CK     + V LLK M  ++  P+ ++YS+L++GL
Sbjct: 245 FVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGL 304

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I  A  +  EM   G   D    NSLL  LC     +K     A  +  K+  + 
Sbjct: 305 HKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDK-----AITLLTKIKDQG 359

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
              D  TY I++  L K  +       L  A E+  I        +I+    +   DKAL
Sbjct: 360 IQPDIYTYTILVDGLCKNGR-------LKDAQEVYQIL-------LIKGYHLDSLFDKAL 405

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            LL  M ++   P+  ++++LI  L + + +  A  L    + +G++
Sbjct: 406 SLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARGLL 452



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 134/265 (50%), Gaps = 14/265 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K+  ++   + K   +  V  +N L+    ++ ++  A   F+  +  G+ P+  
Sbjct: 201 KEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVH 260

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++S+MI   C      EA  ++  M      PN  T++ L++ L KSGR+ +A +++++M
Sbjct: 261 SYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEM 320

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   ++ TYN LL  LC   +V++A  +L  +K+ G++PD+YTYT ++DG CK GR 
Sbjct: 321 HNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRL 380

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A E+    + +G        ++LF+         K + LL  M+   C P+ +++  L
Sbjct: 381 KDAQEVYQILLIKG-----YHLDSLFD---------KALSLLSKMEDNGCTPNPVTFEIL 426

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGF 326
           +  L +      AV + +EM+  G 
Sbjct: 427 IRALFENDMNDKAVELLREMIARGL 451



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 11/324 (3%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG------RV 206
           P +  F  +  SL K       + +  QM   G + ++   N L+   C++G      +V
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +E      +V   G + +  +Y  ++DG CK G +  AM++L       V PNVV ++T+
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
               CK+   +    L   M  +   PD I+Y+TL+ G L  G+++ AV +F +M+    
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + D    N L+ GLC +   +K     A  V   M K+    D  TY  ++      K+ 
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKK-----ARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQE 240

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           ++A    +     G  P   +++ +I  LC    +D+A+ LL  M+  +  P+  +Y  L
Sbjct: 241 NKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSL 300

Query: 447 ITKLDQLEKSYDACALYGAALKQG 470
           I  L +  + +DA  L      +G
Sbjct: 301 IDGLHKSGRIFDAWDLVNEMHNRG 324


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 153/305 (50%), Gaps = 9/305 (2%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M + G  P+V TFT L+N LC  GR+ +AL ++D+M   G +P    Y  ++ GLC +G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            E A  +L  ++   +K  V  Y A++D  CK G    A  L  E  ++G+ P+V+T++ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + + +C+ G       LL+ M +R   PD +++S L+N L+K GK+  A  I+ +M+R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   NS++ G C     ++D L DA ++ + M  K    D  T+  +I    K K+
Sbjct: 177 IFPTTITYNSMIDGFC-----KQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D  +         G +  T+T+  +I   C  G +D A  LL +M      P+  ++  
Sbjct: 232 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQS 291

Query: 446 LITKL 450
           ++  L
Sbjct: 292 MLASL 296



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 156/314 (49%), Gaps = 9/314 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+  TF+ ++   C +    +A  ++D M + G+ P    +  ++N LCK G  + A
Sbjct: 5   GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L +L +M     K ++  YN ++  LC  G    A  +   + + G+ PDV TY+ ++D 
Sbjct: 61  LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           FC+ GR  +A +LL + IER + P+VVTF+ L N   KEG   +   +   M +R   P 
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            I+Y+++++G  K  ++  A  +   M       D    ++L+ G C     +   +++ 
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC-----KAKRVDNG 235

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++F +M ++  V +  TY  +I    +    D A   L+  I  G  P  ITF +++ +
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295

Query: 415 LCGEGKIDKALLLL 428
           LC + ++ KA  +L
Sbjct: 296 LCSKKELRKAFAIL 309



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 141/288 (48%), Gaps = 16/288 (5%)

Query: 50  RSLQAQRFVDRI----------------KASPLKERIDIFDSIKKDGTNWSVSDFNDLLM 93
           R LQA   VDR+                K    +  +++   +++      V  +N ++ 
Sbjct: 25  RVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID 84

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
            L        A   F+E    G+ P+  T+S MI  +C    + +A +++  M +   +P
Sbjct: 85  RLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINP 144

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           +V TF+ L+N+L K G++ EA E+   M R G  P   TYN ++ G C   R+ +A  ML
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
            ++ +    PDV T++ +++G+CK  R +  ME+  E   RG+  N VT+ TL +G+C+ 
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 264

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           G       LL +M      P+ I++ ++L  L    ++R A +I +++
Sbjct: 265 GDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 139/276 (50%), Gaps = 5/276 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  ++  L  + + E+A+   S+     +  +   ++ +I   C       A+ +   M 
Sbjct: 44  YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D G  P+V T++ +++S C+SGR  +A ++L  M      P++ T++ L+  L   G+V 
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA E+  ++   G+ P   TY +++DGFCK  R N+A  +L+    +  +P+VVTF+TL 
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           NGYCK      G+ +   M +R  + + ++Y+TL++G  + G +  A  +   M+  G  
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
            +     S+L  LC K       L  A+ + E + K
Sbjct: 284 PNYITFQSMLASLCSKKE-----LRKAFAILEDLQK 314



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 128/293 (43%), Gaps = 44/293 (15%)

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   GC+P++ T+  L+ GLC  GRV +A  ++  +  +G +P    Y  +++G CK+G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           +  A+ LL++  E  +  +VV +N + +  CK+G  +    L   M  +   PD I+YS 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           +++   + G+   A  + ++M+       ER +N                          
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMI-------ERQINP------------------------- 144

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
                   D  T+  +I  L K  K  EA       +  G  P TIT+N++I   C + +
Sbjct: 145 --------DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDR 196

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++ A  +L  M   +  P   ++  LI    + ++  +   ++    ++G++ 
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA 249



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 69/157 (43%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   + E  +I+  + + G   +   +N ++      +    A +     +S   +P+ 
Sbjct: 157 VKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDV 216

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            TFS +I  YC         ++   M   G   N  T+T L++  C+ G L  A ++L+ 
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV 276

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           M   G  PN  T+  +L  LC    + +A+ +L +++
Sbjct: 277 MISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 188/413 (45%), Gaps = 40/413 (9%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++FD + + G    +  +  L+ AL    +   AV+      S   + N +T+ ++I  
Sbjct: 29  LELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDS 88

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C      +  K+   M + G  PNV  ++ L+N LC+ G+L+EA+ + D+M   G K N
Sbjct: 89  LCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKAN 148

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TYN L+   C  G  +EA      +  +G+ PDV T+T ++D   K G+  EA ++  
Sbjct: 149 VITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFE 208

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             I++G  PN+VT+N+L NG C        V L ++M +R    D ISY+TL+NG    G
Sbjct: 209 LMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSG 268

Query: 310 KIRPAVSIFKEM------------------------VRFGFEVDERMM-----------N 334
           K   A+++F++M                        +R   E+   M             
Sbjct: 269 KTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYT 328

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
            LL GLC     +   +E+A  VF  +           Y I+I  + + ++ + A+    
Sbjct: 329 VLLDGLC-----KNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFD 383

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
               +G +P  +T+N +I  LC EGK+ +A  L   M E        S++ +I
Sbjct: 384 EIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFII 436



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 7/379 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +F  +   G   +V  ++ L+  L  + +   AV  F E  S G+  N  T++ +I  
Sbjct: 99  LKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHA 158

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C    + EA +    M   G  P+V TFT L++ L K G+++EA ++ + M + G  PN
Sbjct: 159 SCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPN 218

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           I TYN LL GLC   +++ A  +   +   G+K DV +Y  +++G+C  G++ EAM L  
Sbjct: 219 IVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFR 278

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +     +TP++ T+  L     + G       L   M+     P   +Y+ LL+GL K G
Sbjct: 279 KMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNG 338

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM-KSWEEKDLLEDAYQVFEKMTKKVSVT 368
            I  A+ +F+ +    ++   R+ + L+ G+   + WE       A ++F+++     V 
Sbjct: 339 CIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWE------SAMEIFDEIPTVGLVP 392

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           +  TY I+I  L K  K  EA        E G     I+FN +I+    E ++ KA+  L
Sbjct: 393 NIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFL 452

Query: 429 FLMYEHAKIPSRTSYDMLI 447
             M E    P+ +   ML+
Sbjct: 453 KRMREKNFSPNDSVTLMLV 471



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 170/336 (50%), Gaps = 5/336 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN  T S +++  C +    +A ++ D M  +G+  ++  +  L+N+L K+ + + A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           +E+  +M    C  N  TY  ++  LC  G   +  +M   + N G+ P+V  Y+++++G
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            C+VG+  EA+ L +E + +G+  NV+T+N+L +  C+ G   +       M     LPD
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++++TL++ L K GK++ A  IF+ M++ G   +    NSLL GLC+        ++ A
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQ-----MDHA 238

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++FE M ++    D  +Y  +I       KT+EA+            P   T+  +++A
Sbjct: 239 VRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKA 298

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           L   G+I  A  L   M    + PS  +Y +L+  L
Sbjct: 299 LYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGL 334



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 141/260 (54%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E   IF+ + K G   ++  +N LL  L + ++ + AV+ F      G+  +  
Sbjct: 196 KKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVI 255

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +I  YC      EA  +   M      P++TT+TIL+ +L ++GR++ A E+ + M
Sbjct: 256 SYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNM 315

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ TY  LL GLC  G +EEA ++  ++K+   KP +  Y+ ++ G  +  R 
Sbjct: 316 QICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRW 375

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             AME+ +E    G+ PN+VT+N + NG CKEG  ++   L   M++  C  D+IS++ +
Sbjct: 376 ESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFI 435

Query: 302 LNGLLKWGKIRPAVSIFKEM 321
           + G L+  +++ A+   K M
Sbjct: 436 IRGFLQENQVQKAMEFLKRM 455



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 161/342 (47%), Gaps = 5/342 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   L+E +++FD +   G   +V  +N L+ A       + A + FS+    G+ P+  
Sbjct: 126 RVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVV 185

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I     K    EA K+ + M   G  PN+ T+  L+N LC   ++  A+ + + M
Sbjct: 186 TFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVM 245

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G K ++ +YN L+ G C  G+ EEA  +   ++ + L P + TYT ++    + GR 
Sbjct: 246 VERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRI 305

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A EL N     G +P++ T+  L +G CK G   + + + + +K     P    YS L
Sbjct: 306 RTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSIL 365

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G+ +  +   A+ IF E+   G   +    N ++ GLC    +E  LLE A ++F +M
Sbjct: 366 IGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLC----KEGKLLE-AERLFVQM 420

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
            +     D  ++  +IR   +  +  +A+  L    E    P
Sbjct: 421 EESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSP 462



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 152/304 (50%), Gaps = 5/304 (1%)

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           +GY PN+ T + LV  +C  G++ +ALE+ D+M R G + +I  Y  L+  L    +   
Sbjct: 3   SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARR 62

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A E+   + ++    + +TY  V+D  CK G + + +++  E I  G+ PNV+ +++L N
Sbjct: 63  AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLIN 122

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           G C+ G   + V L   M  +    + I+Y++L++   ++G  + A   F +MV  G   
Sbjct: 123 GLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILP 182

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D     +L+  L      +K  +++AY++FE M K+    +  TY  ++  L    + D 
Sbjct: 183 DVVTFTTLIDHL-----SKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDH 237

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A+      +E G     I++N +I   C  GK ++A+ L   M      PS T+Y +L+ 
Sbjct: 238 AVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLK 297

Query: 449 KLDQ 452
            L Q
Sbjct: 298 ALYQ 301



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 133/288 (46%), Gaps = 42/288 (14%)

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G +PN+ T + L+KG+C+ G+V +A E+   +   G + D+  Y  +++   K  ++  A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           +EL    +    + N  T+  + +  CK+G  +KG+ + + M      P+ I YS+L+NG
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTK 363
           L + GK+R AV++F EMV  G + +    NSL+   C    W+E      A + F +M  
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKE------ATRTFSQMVG 177

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           +                                   G +P  +TF  +I  L  +GK+ +
Sbjct: 178 E-----------------------------------GILPDVVTFTTLIDHLSKKGKVQE 202

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           A  +  LM +  + P+  +Y+ L+  L    +   A  L+   +++G+
Sbjct: 203 AYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGI 250



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 104/208 (50%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           +E + +F  ++ +    S++ +  LL AL       TA + F+     G +P+  T++++
Sbjct: 271 EEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVL 330

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +   C      EA  V   +    Y P++  ++IL+  + ++ R + A+E+ D++  +G 
Sbjct: 331 LDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGL 390

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PNI TYN ++ GLC  G++ EA  + + ++  G + D  ++  ++ GF +  +  +AME
Sbjct: 391 VPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAME 450

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEG 274
            L    E+  +PN      L N Y  + 
Sbjct: 451 FLKRMREKNFSPNDSVTLMLVNLYAADA 478


>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 584

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 190/417 (45%), Gaps = 8/417 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+     E + IF+S+ ++G   ++  +  L+ AL  L    +     S+    G+ P+S
Sbjct: 54  IRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDS 113

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             F+ MI  + +     EA K+   M + G  P  +TF  L+      GR  EA+++L+ 
Sbjct: 114 ILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEM 173

Query: 181 MGRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           M + G  KPN +TYN L++  C    +EEA+ ++  + N G++PD+ TY  +   F + G
Sbjct: 174 MIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNG 233

Query: 240 RSNEAMELL--NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            ++ A  L+   +     V PN  T   +  GYCKEG   + +  L  MK+    P+ + 
Sbjct: 234 ETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVV 293

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           +++L+ G L              M  FG + D    +++     M +W    L+++  ++
Sbjct: 294 FNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTI-----MNAWSSSGLMDNCEEI 348

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
           F+ M K     D   Y I+ +   +  + D+A   L+   + G     + F  +I   C 
Sbjct: 349 FDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCA 408

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            GK+D AL L   M E     +  +Y+ LI    + ++ + A  L     + GV P+
Sbjct: 409 AGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAPE 465



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 155/330 (46%), Gaps = 16/330 (4%)

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           E+R +I CM  N     V + T L+++L + G+  EA+ + + +   G KP I TY  L+
Sbjct: 28  ESRCLI-CMGSNSCQ-TVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLV 85

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
             L  + R      +L  V+ +G+KPD   + A+++ F   G+ +EAM++  +  E G  
Sbjct: 86  AALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCK 145

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLM-KKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
           P   TFNTL  G+   G P + + LL++M +  N  P++ +Y+ L+       ++  A +
Sbjct: 146 PTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWN 205

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYG 374
           +  +MV  G + D    N+L R        E D   +A ++  KM +  +   P   T G
Sbjct: 206 VMHKMVNSGMQPDIVTYNTLARAFAQNG--ETD---NAERLILKMQQYNNKVKPNERTCG 260

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
           I+IR   K     EAL  L+   E+G  P  + FN++I+        D     L LM E 
Sbjct: 261 IIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEF 320

Query: 435 AKIPSRTSYDMLITK------LDQLEKSYD 458
              P   +Y  ++        +D  E+ +D
Sbjct: 321 GIKPDVVTYSTIMNAWSSSGLMDNCEEIFD 350



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 63/126 (50%)

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           + F +     + P+   +SI+ + Y       +A  +++ M   G   NV  FT +++  
Sbjct: 347 EIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGW 406

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           C +G++  AL + ++M  +G   N++TY  L+ G     +  +A E+L+ ++  G+ P++
Sbjct: 407 CAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAPEM 466

Query: 226 YTYTAV 231
            T   V
Sbjct: 467 STIELV 472


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 204/442 (46%), Gaps = 50/442 (11%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           + S   E + +F  +   G  +  + +  ++  L        A++   E S     P  +
Sbjct: 31  RRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELSGV-YTPTLF 89

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C  +   +A KV++ M +    PNV T+TIL+N LC+S + K A EV  +M
Sbjct: 90  IYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEM 149

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R GCKPN  TY  L++ L   G ++EA  +++  ++  L  DV T T ++ G CK  R 
Sbjct: 150 KRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRL 209

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGY------------------------------- 270
           ++A++ + E  + GV PN VT++ L +G+                               
Sbjct: 210 DDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPG 269

Query: 271 -----CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
                CK G   +    ++ +++   +PD ++YS L+N   + G+   ++ + ++M R G
Sbjct: 270 YLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNG 329

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            + D    ++L+  LC    E K   +DA+++ E M    S  +  TY  V+  L K  K
Sbjct: 330 VKPDVVTYSTLINVLC---KERK--FQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384

Query: 386 TDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
            DE    +H   EM       P  +T++ ++  L   G +D A+ L  L+    + P   
Sbjct: 385 MDE----VHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAA 440

Query: 442 SYDMLITKLDQLEKSYDACALY 463
           +Y M+IT L +  K  +AC +Y
Sbjct: 441 AYSMVITSLCRAGKLEEACGMY 462



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 158/306 (51%), Gaps = 4/306 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY-GLAPNS 120
           KAS L + +   + +++ G   +   +++L+       E +  ++FF E  +  G +  +
Sbjct: 205 KASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEA 264

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
             +   +   C       ARK ++ +  +G  P+V T+++L+N+  ++G+   +LE+L+ 
Sbjct: 265 AAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLED 324

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G KP++ TY+ L+  LC   + ++A+ +L  ++  G  P+V TY +VMDG CK G+
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +E   +    ++   +P+VVT++ + NG  K G     V L +L+K     PD  +YS 
Sbjct: 385 MDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSM 444

Query: 301 LLNGLLKWGKIRPAVSIFKEM-VRFGFEVDERMMNSLLRGLC--MKSWEEKDLLEDAYQV 357
           ++  L + GK+  A  ++  M V    +   R +  L+  LC   ++   + ++E A + 
Sbjct: 445 VITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVASER 504

Query: 358 FEKMTK 363
             +MTK
Sbjct: 505 GHRMTK 510



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 185/403 (45%), Gaps = 18/403 (4%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A+ L ER     S+ + G       F  L   L   ++    V+ F+  +S G+     T
Sbjct: 2   AAKLLER-----SVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETT 56

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           + +++   C      +A +++       Y P +  +  ++  LC++ R+ +A +VL++M 
Sbjct: 57  YKLVVDGLCGAGMANQALELVR-ELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMV 115

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
                PN+ TY  LL GLC   + + A E+   +K +G KP+  TY  ++    + G  +
Sbjct: 116 EESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEID 175

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EA+ ++ E     +  +V+T  T+  G CK       +  ++ M++    P++++YS L+
Sbjct: 176 EALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLV 235

Query: 303 NGLLKWGKIRPAVSIFKE-MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +G  + G++   +  F+E   R G  ++       L  LC   +     L+ A +  E++
Sbjct: 236 HGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGY-----LDRARKSVEEL 290

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            +   V D  TY ++I T  +  + D +L  L      G  P  +T++ +I  LC E K 
Sbjct: 291 RQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKF 350

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLIT------KLDQLEKSYD 458
             A  LL LM      P+  +Y+ ++       K+D++ + Y+
Sbjct: 351 QDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYE 393


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 174/336 (51%), Gaps = 5/336 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN+ T + +I+  C K    +A    D +   G+H +  ++  L++ LCK G  + A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L++L ++     + N   YN ++ G+C    V +A+++   + + G+ P+V TY+A++ G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           F  VG+  +A++L N+ I   + P+  TFN L +G+CK+    +G  +  +M K+  +PD
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++Y++L++G     ++  A SIF  M + G   D R  N L+ G C     +K     A
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDK-----A 236

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
             +F +M  K  + +  TY  +I  L K  +   AL  +    + G  P  +T+N++I A
Sbjct: 237 MNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDA 296

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           L    ++DKA+ L+    +    PS  +Y +LI  L
Sbjct: 297 LFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGL 332



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 139/260 (53%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  D++  +   G + +V  ++ L+    ++ + + A+  F++     + P+ +
Sbjct: 89  KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGY 148

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I++  +C      E + V   M   G  P+V T+  LV+       +  A  + + M
Sbjct: 149 TFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTM 208

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P+I++YN L+ G C + +V++A  +   +    + P+V TY +++DG  K GR 
Sbjct: 209 AQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRI 268

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A++L+++  +RGV PN++T+N++ +   K     K + L+   K +   P   +Y+ L
Sbjct: 269 SYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTIL 328

Query: 302 LNGLLKWGKIRPAVSIFKEM 321
           ++GL K G+++ A +IF+++
Sbjct: 329 IDGLCKGGRLKDARNIFEDL 348



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 143/300 (47%), Gaps = 5/300 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    +  +D+   +       +   +N ++  +        A   +SE  S G++PN  
Sbjct: 54  KVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVV 113

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  +       +A  + + +      P+  TF ILV+  CK  ++KE   V   M
Sbjct: 114 TYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMM 173

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P++ TYN L+ G   V  V  A  +   +   G+ PD+ +Y  +++GFCK+ + 
Sbjct: 174 MKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKV 233

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++AM L NE   + + PNVVT+N+L +G  K G     + L+  M  R   P+ ++Y+++
Sbjct: 234 DKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSI 293

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K  ++  A+++  +    G +        L+ GLC     +   L+DA  +FE +
Sbjct: 294 IDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC-----KGGRLKDARNIFEDL 348



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 147/316 (46%), Gaps = 17/316 (5%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G +     +  L+  L  + E   A+          +  N+  ++ +I   C      +A
Sbjct: 37  GFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDA 96

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             +   M   G  PNV T++ L++     G+LK+A+++ +++     KP+  T+N L+ G
Sbjct: 97  FDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDG 156

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C   +++E   +   +   G+ PDV TY +++DG+  V   N A  + N   + GV P+
Sbjct: 157 FCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPD 216

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           + ++N L NG+CK     K + L   M  +N +P+ ++Y++L++GL K G+I  A+ +  
Sbjct: 217 IRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVD 276

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG------TY 373
           +M   G   +    NS++           D L   +QV + +       D G      TY
Sbjct: 277 QMHDRGVPPNILTYNSII-----------DALFKTHQVDKAIALITKFKDQGIQPSMYTY 325

Query: 374 GIVIRTLGKGKKTDEA 389
            I+I  L KG +  +A
Sbjct: 326 TILIDGLCKGGRLKDA 341



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 119/290 (41%), Gaps = 40/290 (13%)

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
           +G  PN  T N L+KGLC  G++ +A+     +   G   D  +Y  ++ G CKVG +  
Sbjct: 1   MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A++LL     + V  N V +NT+  G CK+        L   M  +   P+ ++YS L++
Sbjct: 61  ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           G    GK                                        L+DA  +F K+  
Sbjct: 121 GFFVVGK----------------------------------------LKDAIDLFNKIIL 140

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           +    D  T+ I++    K +K  E        ++ G IP  +T+N+++       +++ 
Sbjct: 141 ENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNT 200

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A  +   M +    P   SY++LI    +++K   A  L+     + +IP
Sbjct: 201 AKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIP 250


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 179/351 (50%), Gaps = 8/351 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I D+++  G       +  L+  +      E A   F +    GL PN+ T++ +I  YC
Sbjct: 230 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 289

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           NK D   A    D M   G  P+V+T+ +LV++L   GR+ EA +++ +M + G  P+  
Sbjct: 290 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 349

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G    G  + A+++   + + G++P   TYT+++    +  R  EA +L  + 
Sbjct: 350 TYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 409

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++GV+P+V+ FN + +G+C  G   +   LLK M +++  PD+++++TL+ G  + GK+
Sbjct: 410 LDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 469

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +  EM   G + D    N+L+ G     +  +  ++DA+ V ++M          
Sbjct: 470 EEARMLLDEMKXRGIKPDHISYNTLISG-----YGRRGDIKDAFXVRDEMLSIGFNPTLL 524

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
           TY  +I+ L K ++ D A   L   +  G  P   T+ ++I+   G G +D
Sbjct: 525 TYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE---GMGNVD 572



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 179/370 (48%), Gaps = 5/370 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A +F       G  PN  +++ +I  Y ++ +   AR+++D M   G  P+  T+  L++
Sbjct: 192 AREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLIS 251

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            +CK GRL+EA  + D+M  IG  PN  TYN L+ G C  G +E A+     +   G+ P
Sbjct: 252 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP 311

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            V TY  ++      GR  EA +++ E  ++G+ P+ +T+N L NGY + G   +   L 
Sbjct: 312 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLH 371

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M  +   P  ++Y++L+  L +  +++ A  +F++++  G   D  M N+++ G C  
Sbjct: 372 NEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCAN 431

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
              E+     A+ + ++M +K    D  T+  +++   +  K +EA + L      G  P
Sbjct: 432 GNVER-----AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             I++N +I      G I  A  +   M      P+  +Y+ LI  L + ++   A  L 
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 546

Query: 464 GAALKQGVIP 473
              + +G+ P
Sbjct: 547 KEMVNKGISP 556



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 85/173 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +KE  D+F+ I   G +  V  FN ++         E A     E     + P+  TF+ 
Sbjct: 399 MKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 458

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +++  C +    EAR ++D M   G  P+  ++  L++   + G +K+A  V D+M  IG
Sbjct: 459 LMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG 518

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
             P + TYN L+K LC     + A E+L  + N G+ PD  TY ++++G   V
Sbjct: 519 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 571



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+       + E A     E    G+ P+  +++ +I  Y  + D  +A  V D M 
Sbjct: 456 FNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEML 515

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G++P + T+  L+  LCK+     A E+L +M   G  P+  TY  L++G+  V  + 
Sbjct: 516 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLV 575

Query: 208 E 208
           E
Sbjct: 576 E 576


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 159/337 (47%), Gaps = 6/337 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKE 173
           G+APN +T+  +I  +C      EA KV D M   G   P    +  L+   C  G+L  
Sbjct: 176 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 235

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           AL   D+M   G    + TYN L+  L   GR  EAYE++  +   GL PDV+TY  +++
Sbjct: 236 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 295

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G CK G   +A+E+      RGV   VVT+  L     K+G   +   L     +R   P
Sbjct: 296 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 355

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D + Y+ L+N     G I  A  I  EM +     D+   N+L+RGLC+        +++
Sbjct: 356 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR-----VDE 410

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A ++ ++MT++    D  TY  +I          +AL   +  +  G  P  +T+N +IQ
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 470

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            LC  G+ D A  ++  M E+   P  ++Y  LI  L
Sbjct: 471 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 165/318 (51%), Gaps = 6/318 (1%)

Query: 102 ETAVKFFSEASSYG-LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           + AVK F E  + G + P +  ++ +I  YC++     A    D M + G    V T+ +
Sbjct: 198 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 257

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           LV++L   GR  EA E++++MG  G  P++ TYN L+ G C  G V++A E+  N+   G
Sbjct: 258 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 317

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           ++  V TYTA++    K G+  E  +L +EA+ RG+ P++V +N L N +   G   +  
Sbjct: 318 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 377

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            ++  M+K+   PD ++Y+TL+ GL   G++  A  +  EM   G + D    N+L+ G 
Sbjct: 378 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 437

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            MK       ++DA ++  +M  K       TY  +I+ L K  + D+A   +   +E G
Sbjct: 438 SMKGD-----VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 492

Query: 401 HIPRTITFNNVIQALCGE 418
             P   T+ ++I+ L  E
Sbjct: 493 ITPDDSTYISLIEGLTTE 510



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 149/276 (53%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D + + G   +V+ +N L+ AL M      A +   E    GLAP+ +T++I+I  +C +
Sbjct: 241 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 300

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
            +  +A ++ + M   G    V T+T L+ +L K G+++E  ++ D+  R G +P++  Y
Sbjct: 301 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 360

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+      G ++ A+E++  ++   + PD  TY  +M G C +GR +EA +L++E  E
Sbjct: 361 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE 420

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RG+ P++VT+NTL +GY  +G     + +   M  +   P  ++Y+ L+ GL K G+   
Sbjct: 421 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 480

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
           A ++ KEMV  G   D+    SL+ GL  +     D
Sbjct: 481 AENMVKEMVENGITPDDSTYISLIEGLTTEDERAID 516



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 208/484 (42%), Gaps = 51/484 (10%)

Query: 28  KLVVFAAASLSTAESL-DLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVS 86
           K V+ A  +LS    L  L   P SL            P    + ++  +K      S +
Sbjct: 25  KSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTA 84

Query: 87  DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
             + LL AL        A   F++     L   + TF+IM+R  C+      A +++  M
Sbjct: 85  SLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM 140

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGR 205
                 PN  T+  ++   C  GR++ AL+++ +M  R G  PN  TY  ++ G C VGR
Sbjct: 141 ----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGR 196

Query: 206 VEEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKVG------------------------- 239
           V+EA ++   +   G +KP+   Y A++ G+C  G                         
Sbjct: 197 VDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYN 256

Query: 240 ----------RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
                     R  EA EL+ E   +G+ P+V T+N L NG+CKEG   K + + + M +R
Sbjct: 257 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 316

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
                 ++Y+ L+  L K G+++    +F E VR G   D  + N+L+      S     
Sbjct: 317 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI-----NSHSTSG 371

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            ++ A+++  +M KK    D  TY  ++R L    + DEA   +    E G  P  +T+N
Sbjct: 372 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 431

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I     +G +  AL +   M      P+  +Y+ LI  L +  +  DA  +    ++ 
Sbjct: 432 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 491

Query: 470 GVIP 473
           G+ P
Sbjct: 492 GITP 495



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 155/320 (48%), Gaps = 6/320 (1%)

Query: 62  KASPLKERIDIFDSIKKDG-TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K   + E + +FD +   G        +N L+       + +TA+ +       G+A   
Sbjct: 193 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 252

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+++++          EA ++++ M   G  P+V T+ IL+N  CK G +K+ALE+ + 
Sbjct: 253 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 312

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G +  + TY  L+  L   G+V+E  ++       G++PD+  Y A+++     G 
Sbjct: 313 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 372

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A E++ E  ++ + P+ VT+NTL  G C  G   +   L+  M +R   PD ++Y+T
Sbjct: 373 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 432

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G    G ++ A+ I  EM+  GF       N+L++GLC          +DA  + ++
Sbjct: 433 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG-----DDAENMVKE 487

Query: 361 MTKKVSVTDPGTYGIVIRTL 380
           M +     D  TY  +I  L
Sbjct: 488 MVENGITPDDSTYISLIEGL 507



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 111/212 (52%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K+ ++IF+++ + G   +V  +  L+ AL    + +   K F EA   G+ P+  
Sbjct: 299 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 358

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  +    +   A +++  M      P+  T+  L+  LC  GR+ EA +++D+M
Sbjct: 359 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 418

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P++ TYN L+ G    G V++A  +   + N G  P + TY A++ G CK G+ 
Sbjct: 419 TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 478

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
           ++A  ++ E +E G+TP+  T+ +L  G   E
Sbjct: 479 DDAENMVKEMVENGITPDDSTYISLIEGLTTE 510


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 176/392 (44%), Gaps = 38/392 (9%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL P   TF+ +I   C +    EA  +++ M   G H +V T+  +VN +CK G  K A
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L +L +M     KP++  Y+ ++  LC  G   +A  +   +   G+ P+V+TY  ++DG
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           FC  GR ++A  LL + IER + P+V+TFN L +   KEG   +   L   M  R   PD
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184

Query: 295 KISYSTLLNGLLKWGKIRPAVSIF-------------------------------KEMVR 323
            ++Y++++ G  K  +   A  +F                               +E+ R
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 244

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G   +    N+L+ G C     E D L  A  +F++M       D  T  I++    + 
Sbjct: 245 RGLVANTTTYNTLIHGFC-----EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 299

Query: 384 KKTDEALIHLHHAIEMGHIP-RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
           +K +EAL  L   I+M  I   T+ +N +I  +C   K+D+A  L   +  H   P   +
Sbjct: 300 EKLEEAL-ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 358

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           Y+++I+         DA  L+      G  P 
Sbjct: 359 YNVMISGFCGKSAISDANVLFHKMKDNGHEPD 390



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 183/380 (48%), Gaps = 12/380 (3%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G +  V  +  ++  +  + + ++A+   S+     + P+   +S +I   C      +A
Sbjct: 40  GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 99

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
           + +   M + G  PNV T+  +++  C  GR  +A  +L  M      P++ T+N L+  
Sbjct: 100 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 159

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
               G++ EA ++   + +  + PD  TY +++ GFCK  R ++A  + +       +P+
Sbjct: 160 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPD 215

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VVTFNT+ + YC+     +G+ LL+ + +R  + +  +Y+TL++G  +   +  A  +F+
Sbjct: 216 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 275

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM+  G   D    N LL G C     E + LE+A ++FE +       D   Y I+I  
Sbjct: 276 EMISHGVCPDTITCNILLYGFC-----ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 330

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           + KG K DEA          G  P   T+N +I   CG+  I  A +L   M ++   P 
Sbjct: 331 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 390

Query: 440 RTSYDMLI---TKLDQLEKS 456
            ++Y+ LI    K  +++KS
Sbjct: 391 NSTYNTLIRGCLKAGEIDKS 410



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 158/318 (49%), Gaps = 9/318 (2%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M + G  P V TF  L+N LC  GR+ EA  ++++M   G   ++ TY  ++ G+C +G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
            + A  +L  ++   +KPDV  Y+A++D  CK G  ++A  L +E +E+G+ PNV T+N 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + +G+C  G       LL+ M +R   PD ++++ L++  +K GK+  A  +  EM+   
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              D    NS++ G C     + +  +DA  +F+ M       D  T+  +I    + K+
Sbjct: 181 IFPDTVTYNSMIYGFC-----KHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKR 231

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            DE +  L      G +  T T+N +I   C    ++ A  L   M  H   P   + ++
Sbjct: 232 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 291

Query: 446 LITKLDQLEKSYDACALY 463
           L+    + EK  +A  L+
Sbjct: 292 LLYGFCENEKLEEALELF 309



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 164/329 (49%), Gaps = 9/329 (2%)

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
               A   FSE    G+APN +T++ MI  +C+   + +A++++  M +   +P+V TF 
Sbjct: 95  HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 154

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L+++  K G+L EA ++ D+M      P+  TYN ++ G C   R ++A  M   + + 
Sbjct: 155 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS- 213

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
              PDV T+  ++D +C+  R +E M+LL E   RG+  N  T+NTL +G+C+       
Sbjct: 214 ---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 270

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             L + M      PD I+ + LL G  +  K+  A+ +F+ +     ++D    N ++ G
Sbjct: 271 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 330

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           +C  S      +++A+ +F  +       D  TY ++I          +A +  H   + 
Sbjct: 331 MCKGSK-----VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 385

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLL 428
           GH P   T+N +I+     G+IDK++ L+
Sbjct: 386 GHEPDNSTYNTLIRGCLKAGEIDKSIELI 414



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 171/390 (43%), Gaps = 13/390 (3%)

Query: 37  LSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMAL 95
           LS  E   +K  P  +     +DR+ K     +   +F  + + G   +V  +N ++   
Sbjct: 68  LSKMEETHIK--PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 125

Query: 96  VMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV 155
                   A +   +     + P+  TF+ +I     +   FEA K+ D M      P+ 
Sbjct: 126 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 185

Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
            T+  ++   CK  R  +A  + D M      P++ T+N ++   C   RV+E  ++L  
Sbjct: 186 VTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLRE 241

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           +   GL  +  TY  ++ GFC+V   N A +L  E I  GV P+ +T N L  G+C+   
Sbjct: 242 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 301

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             + + L ++++      D ++Y+ +++G+ K  K+  A  +F  +   G E D +  N 
Sbjct: 302 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 361

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           ++ G C KS      + DA  +F KM       D  TY  +IR   K  + D+++  +  
Sbjct: 362 MISGFCGKSA-----ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
               G      T   ++  L  +G++DK+ 
Sbjct: 417 MRSNGFSGDAFTI-KMVADLITDGRLDKSF 445


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 186/392 (47%), Gaps = 19/392 (4%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  FN +L +   +    T V          + P+ +T +I+I C+C+      A  V+ 
Sbjct: 63  IIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLS 122

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY P+  T T L+  LC  G++K+AL   D++   G + +  +Y  L+ G+C +G
Sbjct: 123 KILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIG 182

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A ++L  +     +P+V  Y  ++D  CK    +EA  L +E   +G++ NVVT++
Sbjct: 183 ETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYS 242

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            + +G+C  G   + +G L  M  +   PD   Y+TL++ L K GK++ A ++   +V+ 
Sbjct: 243 AIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKT 302

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             + +    N+L+ G              A  VF  +       D  +Y I+I  L K K
Sbjct: 303 CLKPNVITYNTLIDGY-------------AKHVFNAVGLMGVTPDVWSYNIMINRLCKIK 349

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           + +EAL       +   +P T+T+N++I  LC  G+I  A  L+  M++     +  +Y+
Sbjct: 350 RVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYN 409

Query: 445 MLITKL---DQLEKSYDACALYGAALKQGVIP 473
            LI  L    QL+K   A AL      QG+ P
Sbjct: 410 SLINGLCKNGQLDK---AIALINKMKDQGIQP 438



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 178/367 (48%), Gaps = 12/367 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    +  I +   I    T  +V  +N ++  L        A   FSE S  G++ N  
Sbjct: 180 KIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVV 239

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  +C      EA   ++ M     +P+V  +  LV++L K G++KEA  VL  +
Sbjct: 240 TYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVI 299

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +   KPN+ TYN L+ G  Y   V  A  ++      G+ PDV++Y  +++  CK+ R 
Sbjct: 300 VKTCLKPNVITYNTLIDG--YAKHVFNAVGLM------GVTPDVWSYNIMINRLCKIKRV 351

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA+ L  E  ++ + PN VT+N+L +G CK G       L+  M  R    + I+Y++L
Sbjct: 352 EEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSL 411

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL K G++  A+++  +M   G + D   +N LL GL  K       L++A  +F+ +
Sbjct: 412 INGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKR----LKNAQGLFQDL 467

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K    +  TY I+I    K    DEA        + G  P  ITF  +I AL  +G+ 
Sbjct: 468 LDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGET 527

Query: 422 DKALLLL 428
           DKA  LL
Sbjct: 528 DKAEKLL 534



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 182/391 (46%), Gaps = 16/391 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ +   D +   G       +  L+  +  + E   A++           PN   ++ 
Sbjct: 149 VKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNT 208

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I C C +    EA  +   M   G   NV T++ +++  C  G+L EAL  L++M    
Sbjct: 209 IIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKA 268

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P++  YN L+  L   G+V+EA  +L  +    LKP+V TY  ++DG+ K        
Sbjct: 269 INPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK-------- 320

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            + N     GVTP+V ++N + N  CK     + + L K M ++N +P+ ++Y++L++GL
Sbjct: 321 HVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGL 380

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G+I  A  +  EM   G   +    NSL+ GLC     +   L+ A  +  KM  + 
Sbjct: 381 CKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLC-----KNGQLDKAIALINKMKDQG 435

Query: 366 SVTDPGTYGIVIR-TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              D  T  I++   L KGK+   A       ++ G+ P   T+N +I   C EG +D+A
Sbjct: 436 IQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEA 495

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
             L   M +    P+  ++ ++I  L  LEK
Sbjct: 496 YALQSKMEDSGCSPNAITFKIIICAL--LEK 524



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 1/222 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+++   G    V  +N ++  L  +   E A+  + E     + PN+ T++ +I   C
Sbjct: 322 VFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLC 381

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A  +ID M D G+H NV T+  L+N LCK+G+L +A+ ++++M   G +P++ 
Sbjct: 382 KSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMY 441

Query: 192 TYNCLLKG-LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           T N LL G LC   R++ A  +  ++ + G  P+VYTY  ++ G CK G  +EA  L ++
Sbjct: 442 TLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSK 501

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
             + G +PN +TF  +     ++G   K   LL  M  R  L
Sbjct: 502 MEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 5/168 (2%)

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
           TP ++ FN + + + K       V L + ++ +   PD  + + L+N     G+I  A S
Sbjct: 60  TPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFS 119

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           +  +++++G++ D   + +L++GLC+K   +K     A    +K+  +    D  +YG +
Sbjct: 120 VLSKILKWGYQPDTVTLTTLIKGLCLKGQVKK-----ALHFHDKLLAQGFRLDQVSYGTL 174

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           I  + K  +T  A+  L         P  + +N +I  LC    + +A
Sbjct: 175 INGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEA 222


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 208/473 (43%), Gaps = 68/473 (14%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L+  + +   ++K G   ++S  N  +  LV   + E A++F       G+ P+  
Sbjct: 243 RAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIV 302

Query: 122 TFSIMIRCYCNKNDFFEARKVI-------------------------------DCMF--- 147
           T++ +I+ YC+ N   +A ++I                                C+    
Sbjct: 303 TYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKM 362

Query: 148 --DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
             D+   P+  T+  L++ L K G   +AL  L +    G   +   Y+ ++   C  GR
Sbjct: 363 VQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGR 422

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++EA  +++++ +    PDV TYTA++DGFC++GR +EA ++L +  + G  PN V++  
Sbjct: 423 MDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTA 482

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L NG C  G  ++   ++ + ++    P+ I+Y  +++G  + GK+  A  + +EMV  G
Sbjct: 483 LLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKG 542

Query: 326 FEVDERMMNSLLRGLC--MKSWEEKDLLED----------------------------AY 355
           F      +N L++ LC   K  E K  LE+                            A 
Sbjct: 543 FFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAAL 602

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
            V E M       D  TY  +   LGK  + DEA   +   +  G  P  +TF +VI   
Sbjct: 603 SVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRY 662

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           C  G++D  L LL  M +  + P RT Y+ +I KL       +A  L G  L+
Sbjct: 663 CQWGRVDDMLNLLDRMVK--RKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLR 713



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 195/418 (46%), Gaps = 12/418 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L++ +   + ++  G    +  +N L+     LN  E A++  +   S G  P+ 
Sbjct: 277 VKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDK 336

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
            ++  ++   C +    + + +++ M  D+   P+  T+  L++ L K G   +AL  L 
Sbjct: 337 VSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLK 396

Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           +    G   +   Y+ ++   C  GR++EA  +++++ +    PDV TYTA++DGFC++G
Sbjct: 397 EAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLG 456

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R +EA ++L +  + G  PN V++  L NG C  G  ++   ++ + ++    P+ I+Y 
Sbjct: 457 RIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYG 516

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            +++G  + GK+  A  + +EMV  GF      +N L++ LC     +   + +A +  E
Sbjct: 517 VVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLC-----QNQKVVEAKKYLE 571

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +   K    +   +  VI    +    + AL  L         P  +T+  +  AL  +G
Sbjct: 572 ECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKG 631

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
           ++D+A  L+  M      P+  ++  +I +  Q  +  D   L    +K      RKP
Sbjct: 632 RLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVK------RKP 683



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 170/336 (50%), Gaps = 6/336 (1%)

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           AR+V+  M   G   +   F  ++ S  ++G+L+ AL VL  M + G +PN+   N  + 
Sbjct: 215 ARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIY 274

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
            L    ++E+A   L  ++  G+KPD+ TY +++ G+C + R  +A+EL+     +G  P
Sbjct: 275 VLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPP 334

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           + V++ T+    CKE    +   L+ K+++  N +PD+++Y+TL++ L K G    A++ 
Sbjct: 335 DKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAF 394

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
            KE    GF +D+   ++++   C     +K  +++A  +   M  +    D  TY  ++
Sbjct: 395 LKEAEDKGFHIDKVGYSAIVHSFC-----QKGRMDEAKSLVIDMYSRSCNPDVVTYTAIV 449

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
               +  + DEA   L    + G  P T+++  ++  LC  GK  +A  ++ +  EH   
Sbjct: 450 DGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWT 509

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P+  +Y +++    +  K  +AC L    +++G  P
Sbjct: 510 PNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFP 545



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 182/425 (42%), Gaps = 66/425 (15%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+  +   F  ++  Y        A +V+  M   G  PN++     +  L K  +L++A
Sbjct: 226 GIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKA 285

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L  L++M   G KP+I TYN L+KG C + R+E+A E++  + + G  PD  +Y  VM  
Sbjct: 286 LRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGF 345

Query: 235 FCKV------------------------------------GRSNEAMELLNEAIERGVTP 258
            CK                                     G +++A+  L EA ++G   
Sbjct: 346 LCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHI 405

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           + V ++ + + +C++G   +   L+  M  R+C PD ++Y+ +++G  + G+I  A  + 
Sbjct: 406 DKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKML 465

Query: 319 KEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDL-------------------------- 350
           ++M + G + +     +LL GLC   KS E +++                          
Sbjct: 466 QQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRRE 525

Query: 351 --LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             L +A  +  +M +K     P    ++I++L + +K  EA  +L   +  G     + F
Sbjct: 526 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNF 585

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
             VI   C  G ++ AL +L  MY   K P   +Y  L   L +  +  +A  L    L 
Sbjct: 586 TTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLS 645

Query: 469 QGVIP 473
           +G+ P
Sbjct: 646 KGLDP 650



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 15/268 (5%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   L E  D+   + + G   +  + N L+ +L    +   A K+  E  + G A N  
Sbjct: 524 REGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVV 583

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  +C   D   A  V++ M+ +  HP+  T+T L ++L K GRL EA E++ +M
Sbjct: 584 NFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKM 643

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P   T+  ++   C  GRV++   +L  +     KP    Y  V++  C  G  
Sbjct: 644 LSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNL 701

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD-----KI 296
            EA +LL + +      +  T + L     K+G  +    +   M +RN  PD     K+
Sbjct: 702 EEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKV 761

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           +   +L+G L        V   K M+RF
Sbjct: 762 TKKLVLDGNL--------VEADKLMLRF 781



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 2/169 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L  AL      + A +   +  S GL P   TF  +I  YC      +   ++D M 
Sbjct: 620 YTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMV 679

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                P  T +  ++  LC  G L+EA ++L ++ R   K +  T + L++     G   
Sbjct: 680 KR--KPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVAL 737

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
            AY++   +    L PD+     V       G   EA +L+   +ERG+
Sbjct: 738 SAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGI 786


>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 536

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 167/334 (50%), Gaps = 11/334 (3%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID-CM 146
           FN L+  L  + + E AV+     S +G  P+  T++ +I+ +C  N+  +A ++ D   
Sbjct: 209 FNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVK 268

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
             +G  P+V T+T +++  CK+G+++EA  +LD M R+G  P   T+N L+ G    G +
Sbjct: 269 SSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
             A E+   + + G  PDV T+T+++DG+C+VG+ N+   L  E   RG+ PN  T++ L
Sbjct: 329 HTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSIL 388

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            N  CKE   +K   LL  +  ++ +P    Y+ +++G  K GK+  A+ I +EM +   
Sbjct: 389 INALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKC 448

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           + D+     L+ G CMK       + +A  +F KM       D  T   ++  L K    
Sbjct: 449 KPDKITFTILIIGHCMKGR-----MFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503

Query: 387 DEALIHLHHAIEMGHI----PRTITFNNVIQALC 416
            EA  HL+     G I    P      NV  A C
Sbjct: 504 KEAY-HLNQIAHKGQINDGAPLETKTANVTLAAC 536



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 147/275 (53%), Gaps = 1/275 (0%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNSWTFSI 125
           ++ +++   +   G    +  +N L+      NE + A + F +  SS G +P+  T++ 
Sbjct: 223 EKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTS 282

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI  YC      EA  ++D M   G +P   TF +LV+   K+G +  A E+  +M   G
Sbjct: 283 MISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFG 342

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P++ T+  L+ G C VG+V + + +   +   G+ P+ +TY+ +++  CK  R  +A 
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKAR 402

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ELL +   + + P    +N + +G+CK G   + + +++ M+K+ C PDKI+++ L+ G 
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGH 462

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
              G++  AVSIF +MV  G   D+  ++SLL  L
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 155/298 (52%), Gaps = 6/298 (2%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           +  TF IL+  LC  G+ ++A+E+L  M   GC P+I TYN L+KG C    +++A EM 
Sbjct: 205 DTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMF 264

Query: 214 MNVKND-GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
            +VK+  G  PDV TYT+++ G+CK G+  EA  LL++ +  G+ P  VTFN L +GY K
Sbjct: 265 DDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAK 324

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G       +   M    C PD +++++L++G  + G++     +++EM   G   +   
Sbjct: 325 AGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFT 384

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            + L+  LC    +E  LL+ A ++  ++  K  +  P  Y  VI    K  K +EA++ 
Sbjct: 385 YSILINALC----KENRLLK-ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVI 439

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +    +    P  ITF  +I   C +G++ +A+ +   M      P + +   L++ L
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 188/397 (47%), Gaps = 24/397 (6%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI---- 143
           +N L  +L      + A + F    S G++PNS     ++  +  K     A  ++    
Sbjct: 106 YNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQSY 165

Query: 144 ----DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
                CM  N           L+N+L K  R+++A+++ ++  R     + +T+N L++G
Sbjct: 166 EVEGCCMVVNS----------LLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRG 215

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA-IERGVTP 258
           LC VG+ E+A E+L  +   G  PD+ TY  ++ GFCK     +A E+ ++     G +P
Sbjct: 216 LCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSP 275

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           +VVT+ ++ +GYCK G   +   LL  M +    P  ++++ L++G  K G++  A  I 
Sbjct: 276 DVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIR 335

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
            +M+ FG   D     SL+ G C         +   ++++E+M  +    +  TY I+I 
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYC-----RVGQVNQGFRLWEEMNARGMFPNAFTYSILIN 390

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L K  +  +A   L        IP+   +N VI   C  GK+++A++++  M +    P
Sbjct: 391 ALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKP 450

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            + ++ +LI       + ++A +++   +  G  P +
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 136/326 (41%), Gaps = 39/326 (11%)

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD----------------VY 226
           ++  + +  TYN L + LC  G  + A +M   +K+DG+ P+                ++
Sbjct: 96  KLNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLH 155

Query: 227 TYTAVM------DGFC-----------KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
             TA++      +G C           K+ R  +AM+L  E +      +  TFN L  G
Sbjct: 156 CATALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRG 215

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM-VRFGFEV 328
            C  G   K V LL  M    CLPD ++Y+TL+ G  K  +++ A  +F ++    G   
Sbjct: 216 LCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSP 275

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D     S++ G C     +   +++A  + + M +        T+ +++    K  +   
Sbjct: 276 DVVTYTSMISGYC-----KAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHT 330

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A       I  G  P  +TF ++I   C  G++++   L   M      P+  +Y +LI 
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILIN 390

Query: 449 KLDQLEKSYDACALYGAALKQGVIPQ 474
            L +  +   A  L G    + +IPQ
Sbjct: 391 ALCKENRLLKARELLGQLASKDIIPQ 416


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 191/416 (45%), Gaps = 40/416 (9%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE + ++  +  +G   S+  ++ L++AL    +  T +    E  + GL PN +T++I 
Sbjct: 209 KEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTIC 268

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           IR         +A  ++  M D G  P+V T+T+L+++LC +G+L +A E+  +M     
Sbjct: 269 IRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH 328

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           KP++ TY  L+      G +E        ++ DG  PDV TYT +++  CK G+ ++A +
Sbjct: 329 KPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFD 388

Query: 247 LLNEAIERGVTPNVVTFNTLFNG-----------------------------------YC 271
           +L+    RG+ PN+ T+NTL +G                                   Y 
Sbjct: 389 MLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYG 448

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           K G P K +   + MKKR  +P   + +  L  L + G+IR A  IF ++   G   D  
Sbjct: 449 KLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSV 508

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             N +     MK + +   ++ A ++  +M  +    D      +I TL K  + DEA  
Sbjct: 509 TYNMM-----MKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQ 563

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                 ++   P  +T+N +I  L  EGK+ KAL L   M E    P+  +++ L+
Sbjct: 564 MFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALL 619



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 191/389 (49%), Gaps = 5/389 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  + +   I  +++ +G    V  +  L+ AL    + + A + +++  +    P+  
Sbjct: 274 RAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLV 333

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  ++  + N  D    ++    M  +GY P+V T+TILV +LCKSG++ +A ++LD M
Sbjct: 334 TYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVM 393

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN+ TYN L+ GL  + R++EA E+  N+++ G+ P  Y+Y   +D + K+G  
Sbjct: 394 RVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDP 453

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A++   +  +RG+ P++   N       + G   +   +   +      PD ++Y+ +
Sbjct: 454 EKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMM 513

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +    K G+I  A  +  EM+  G E D  ++NSL+  L      +   +++A+Q+F ++
Sbjct: 514 MKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTL-----YKAGRVDEAWQMFGRL 568

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                     TY I+I  LGK  K  +AL       E G  P T+TFN ++  LC    +
Sbjct: 569 KDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAV 628

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           D AL +   M      P   +Y+ +I  L
Sbjct: 629 DLALKMFCRMTIMNCSPDVLTYNTIIYGL 657



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 194/428 (45%), Gaps = 30/428 (7%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +++ G   +   +N L+  L+     + A+K +    S GL P+  T+S ++     + D
Sbjct: 183 MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRD 242

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
                 +++ M   G  PN+ T+TI +  L ++GR+ +A  +L  M   GC P++ TY  
Sbjct: 243 TGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTV 302

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+  LC  G++++A E+   ++    KPD+ TY  +M  F   G         +E    G
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
             P+VVT+  L    CK G   +   +L +M+ R  +P+  +Y+TL++GLL   ++  A+
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422

Query: 316 SIFKEMVRFGFE---------VD--------ERMMNSL----LRGL---------CMKSW 345
            +F  M   G           +D        E+ +++      RG+          + S 
Sbjct: 423 ELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSL 482

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            E   + +A  +F  +       D  TY ++++   K  + D+A   L   +  G  P  
Sbjct: 483 AEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDI 542

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           I  N++I  L   G++D+A  +   + +    P+  +Y++LIT L +  K   A  L+G+
Sbjct: 543 IVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGS 602

Query: 466 ALKQGVIP 473
             + G  P
Sbjct: 603 MKESGCPP 610



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 217/498 (43%), Gaps = 76/498 (15%)

Query: 41  ESLDLKENPRSLQAQR-------FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLL 92
           E+L+L  N  SL           F+D   K    ++ +D F+ +KK G   S++  N  L
Sbjct: 420 EALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASL 479

Query: 93  MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
            +L  +     A   F++  + GL+P+S T+++M++CY       +A K++  M   G  
Sbjct: 480 YSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCE 539

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++     L+++L K+GR+ EA ++  ++  +   P + TYN L+ GL   G++ +A ++
Sbjct: 540 PDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDL 599

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
             ++K  G  P+  T+ A++D  CK    + A+++         +P+V+T+NT+  G  K
Sbjct: 600 FGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIK 659

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI--------------- 317
           EG           MKK    PD ++  TLL G++K G++  A+ I               
Sbjct: 660 EGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQ 718

Query: 318 --------------FKEMVRFGFEV-------DERMMNSLLRGLCM--KSWEEKDLL--- 351
                          +E + F   +       D+ ++  L+R LC   K+ + K L    
Sbjct: 719 VWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKF 778

Query: 352 --------------------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                                     E A ++F +M       +  TY +++   GK K+
Sbjct: 779 TKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKR 838

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            DE     +  +  G  P  IT N +I AL     I+KAL L + +      P+  +Y  
Sbjct: 839 IDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGP 898

Query: 446 LITKLDQLEKSYDACALY 463
           LI  L +  +S +A  ++
Sbjct: 899 LIGGLLKAGRSEEAMKIF 916



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 175/364 (48%), Gaps = 5/364 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  + +  D+ D ++  G   ++  +N L+  L+ L   + A++ F+   S G+AP ++
Sbjct: 379 KSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAY 438

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++ + I  Y    D  +A    + M   G  P++      + SL + GR++EA ++ + +
Sbjct: 439 SYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDI 498

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TYN ++K     G++++A ++L  + ++G +PD+    +++D   K GR 
Sbjct: 499 HNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRV 558

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA ++     +  + P VVT+N L  G  KEG  +K + L   MK+  C P+ ++++ L
Sbjct: 559 DEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNAL 618

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+ L K   +  A+ +F  M       D    N+++ GL  +          A+  + +M
Sbjct: 619 LDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGY-----AFWFYHQM 673

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K +S      Y ++   +  G+  D   I +    + G       +  +++ +  E +I
Sbjct: 674 KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEI 733

Query: 422 DKAL 425
           ++A+
Sbjct: 734 EEAI 737



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 169/379 (44%), Gaps = 18/379 (4%)

Query: 49   PRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFF 108
            P  ++  R  D IK         + + + + G   S   + +L+  +++  E E A+ F 
Sbjct: 689  PGVVKDGRVEDAIKI--------VMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFA 740

Query: 109  SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVTTFTILVNSLCK 167
                   +  +      +IR  C +    +A+K+ D    + G HP   ++  L++ L  
Sbjct: 741  EGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLG 800

Query: 168  SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
                + AL++  +M   GC PNI TYN LL       R++E +E+   +   G KP++ T
Sbjct: 801  CNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIIT 860

Query: 228  YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
            +  ++    K    N+A++L  E I    +P   T+  L  G  K G   + + + + M 
Sbjct: 861  HNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMP 920

Query: 288  KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
               C P+   Y+ L+NG  K G +  A  +FK M++ G   D +    L+  L M     
Sbjct: 921  DYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGR-- 978

Query: 348  KDLLEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
               ++DA   FE++  K++  DP T  Y ++I  LGK ++ +EAL         G  P  
Sbjct: 979  ---VDDAVHYFEEL--KLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPEL 1033

Query: 406  ITFNNVIQALCGEGKIDKA 424
             T+N +I      G +D+A
Sbjct: 1034 YTYNALILHFGNAGMVDQA 1052



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 158/338 (46%), Gaps = 6/338 (1%)

Query: 72   IFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
            +FD   K  GT+ +   +N L+  L+  N  E A+K F E  + G  PN +T+++++  +
Sbjct: 774  LFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAH 833

Query: 131  CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
                   E  ++ + M   G  PN+ T  I++++L KS  + +AL++  ++      P  
Sbjct: 834  GKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTP 893

Query: 191  QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             TY  L+ GL   GR EEA ++   + +   KP+   Y  +++GF K G  N A +L   
Sbjct: 894  CTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKR 953

Query: 251  AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             I+ G+ P++ ++  L       G     V   + +K     PD +SY+ ++NGL K  +
Sbjct: 954  MIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRR 1013

Query: 311  IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
            +  A+S+F EM   G   +    N+L+       +    +++ A ++FE++       + 
Sbjct: 1014 LEEALSLFSEMKNRGISPELYTYNALIL-----HFGNAGMVDQAGKMFEELQFMGLEPNV 1068

Query: 371  GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             TY  +IR   K    D A       + +G  P   TF
Sbjct: 1069 FTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 121/243 (49%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            +K++ + + +D++  I     + +   +  L+  L+     E A+K F E   Y   PN 
Sbjct: 869  VKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNC 928

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
              ++I+I  +    +   A  +   M   G  P++ ++TILV  L  +GR+ +A+   ++
Sbjct: 929  AIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEE 988

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            +   G  P+  +YN ++ GL    R+EEA  +   +KN G+ P++YTY A++  F   G 
Sbjct: 989  LKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGM 1048

Query: 241  SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             ++A ++  E    G+ PNV T+N L  G+ K G   +   + K M    C P+  +++ 
Sbjct: 1049 VDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQ 1108

Query: 301  LLN 303
            L N
Sbjct: 1109 LPN 1111



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 128/264 (48%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K+  + E  ++++ +   G   ++   N ++ ALV  N    A+  + E  S   +P   
Sbjct: 835  KSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPC 894

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T+  +I          EA K+ + M D    PN   + IL+N   K+G +  A ++  +M
Sbjct: 895  TYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRM 954

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             + G +P++++Y  L++ L   GRV++A      +K  GL PD  +Y  +++G  K  R 
Sbjct: 955  IKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRL 1014

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             EA+ L +E   RG++P + T+N L   +   G   +   + + ++     P+  +Y+ L
Sbjct: 1015 EEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNAL 1074

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFG 325
            + G  K G    A S+FK+M+  G
Sbjct: 1075 IRGHSKSGNKDRAFSVFKKMMIVG 1098



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 87/386 (22%), Positives = 160/386 (41%), Gaps = 42/386 (10%)

Query: 91   LLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
            LL  +V     E A+K   E     GL  ++  +  ++ C   + +  EA    + +  N
Sbjct: 687  LLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCN 746

Query: 150  GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR-IGCKPNIQTYNCLLKGLCYVGRVEE 208
                +      L+  LCK  +  +A ++ D+  + +G  P  ++YNCL+ GL      E 
Sbjct: 747  SICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEA 806

Query: 209  AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
            A ++ + +KN G  P+++TY  ++D   K  R +E  EL NE + RG  PN++T N + +
Sbjct: 807  ALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIIS 866

Query: 269  GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
               K  +  K + L   +   +  P   +Y  L+ GLLK G+                  
Sbjct: 867  ALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRS----------------- 909

Query: 329  DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                                   E+A ++FE+M       +   Y I+I   GK    + 
Sbjct: 910  -----------------------EEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNI 946

Query: 389  ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
            A       I+ G  P   ++  +++ L   G++D A+     +      P   SY+++I 
Sbjct: 947  ACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMIN 1006

Query: 449  KLDQLEKSYDACALYGAALKQGVIPQ 474
             L +  +  +A +L+     +G+ P+
Sbjct: 1007 GLGKSRRLEEALSLFSEMKNRGISPE 1032



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 5/305 (1%)

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           GR+++   V D M +     N  TY  + K L   G + +A   L  ++  G   + Y+Y
Sbjct: 136 GRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSY 195

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
             ++    + G   EA+++    I  G+ P++ T++ L     +       + LL+ M+ 
Sbjct: 196 NGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMET 255

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
               P+  +Y+  +  L + G+I  A  I K M   G   D      L+  LC       
Sbjct: 256 LGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGK--- 312

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             L+ A +++ KM       D  TY  ++   G     +            G+ P  +T+
Sbjct: 313 --LDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTY 370

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
             +++ALC  GK+D+A  +L +M     +P+  +Y+ LI+ L  L +  +A  L+     
Sbjct: 371 TILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMES 430

Query: 469 QGVIP 473
            GV P
Sbjct: 431 LGVAP 435


>gi|222631493|gb|EEE63625.1| hypothetical protein OsJ_18442 [Oryza sativa Japonica Group]
          Length = 390

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 156/325 (48%), Gaps = 8/325 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+AP+  T+S +I   C+     EA  V+D M + G  PN  T+T +V++ C  GR+ EA
Sbjct: 5   GVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEA 64

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
             +L+ M   G  P+  TYN L++ LC VG  EE   +L      G  PDV TY++ MDG
Sbjct: 65  KRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDG 124

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK GR +++  L+++ +  G+ P+ VT N L +G C+  T      LL+   +     +
Sbjct: 125 LCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDAN 184

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            ++Y+T++  L    +    V +F +M + G   +    N ++  LC      K L    
Sbjct: 185 VVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALF--- 241

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
                 +  K  V    TY  +IR L    + +E  + L+  IE G  P  IT++ VI  
Sbjct: 242 -----LLRSKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDC 296

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPS 439
           LC E K   AL   +   E    PS
Sbjct: 297 LCREEKFLVALCCFYQSLEDDFFPS 321



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 163/329 (49%), Gaps = 8/329 (2%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M  NG  P+V T++ L++ LC +G++ EAL VLD M   GC+PN  TY  ++   C  GR
Sbjct: 1   MVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGR 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           + EA  +L  +   G  P   TY  +++  CKVG   E   LL E+  +G TP+V+T+++
Sbjct: 61  IHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSS 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
             +G CK G   K   L+  M      P +++ + LL+G+ +      A  + +     G
Sbjct: 121 YMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELG 180

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
           ++ +    N+++R LC    +E   L    ++F  M KK    +  T+ IV+ +L K  +
Sbjct: 181 WDANVVNYNTVMRKLC----DEHRWL-SVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGR 235

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             +AL  L        +   IT+N +I+ L   G+ ++  LLL+ M E    P+  +Y +
Sbjct: 236 LHKALFLLR---SKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSL 292

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +I  L + EK   A   +  +L+    P 
Sbjct: 293 VIDCLCREEKFLVALCCFYQSLEDDFFPS 321



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/330 (19%), Positives = 139/330 (42%), Gaps = 34/330 (10%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E   + +++   G   S + +N L+ AL  +   E       E+++ G  P+  T+S 
Sbjct: 61  IHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSS 120

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            +   C      ++  ++D M  NG  P+  T  IL++ +C+S     A  +L+    +G
Sbjct: 121 YMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELG 180

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR----- 240
              N+  YN +++ LC   R     ++  ++   G+ P+ +T+  V+   CK+GR     
Sbjct: 181 WDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKAL 240

Query: 241 ---------------------------SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
                                       NE   LL + IE G+ PN +T++ + +  C+E
Sbjct: 241 FLLRSKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCRE 300

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
              +  +       + +  P   ++ +++ GL+  G +    ++   ++  GF ++  + 
Sbjct: 301 EKFLVALCCFYQSLEDDFFPS--AFLSIIRGLIVGGMLGQLHTLIGCVLGQGFIIEVYIY 358

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
             L++ LC   + +   +     + E+M +
Sbjct: 359 QELIKALCKNGYCQSVEMYKVCHILERMLR 388



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 11/283 (3%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
            P  +    ++D + KA  + +   + D +  +G   S    N LL  +   +    A +
Sbjct: 112 TPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKR 171

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
               ++  G   N   ++ ++R  C+++ +    K+   M   G  PN  TF I+V+SLC
Sbjct: 172 LLECSAELGWDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLC 231

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K GRL +AL +L     +     + TYN L++ L   G   E   +L  +   G+ P+  
Sbjct: 232 KLGRLHKALFLLRSKEFVA---TVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDI 288

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY+ V+D  C+  +   A+    +++E    P+   F ++  G    G   +   L+  +
Sbjct: 289 TYSLVIDCLCREEKFLVALCCFYQSLEDDFFPS--AFLSIIRGLIVGGMLGQLHTLIGCV 346

Query: 287 KKRNCLPDKISYSTLLNGLLKWG-----KIRPAVSIFKEMVRF 324
             +  + +   Y  L+  L K G     ++     I + M+R 
Sbjct: 347 LGQGFIIEVYIYQELIKALCKNGYCQSVEMYKVCHILERMLRL 389


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 159/337 (47%), Gaps = 6/337 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKE 173
           G+APN +T+  +I  +C      EA KV D M   G   P    +  L+   C  G+L  
Sbjct: 545 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 604

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           AL   D+M   G    + TYN L+  L   GR  EAYE++  +   GL PDV+TY  +++
Sbjct: 605 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 664

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G CK G   +A+E+      RGV   VVT+  L     K+G   +   L     +R   P
Sbjct: 665 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 724

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D + Y+ L+N     G I  A  I  EM +     D+   N+L+RGLC+        +++
Sbjct: 725 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR-----VDE 779

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A ++ ++MT++    D  TY  +I          +AL   +  +  G  P  +T+N +IQ
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 839

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            LC  G+ D A  ++  M E+   P  ++Y  LI  L
Sbjct: 840 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 165/318 (51%), Gaps = 6/318 (1%)

Query: 102 ETAVKFFSEASSYG-LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           + AVK F E  + G + P +  ++ +I  YC++     A    D M + G    V T+ +
Sbjct: 567 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 626

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           LV++L   GR  EA E++++MG  G  P++ TYN L+ G C  G V++A E+  N+   G
Sbjct: 627 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 686

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           ++  V TYTA++    K G+  E  +L +EA+ RG+ P++V +N L N +   G   +  
Sbjct: 687 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 746

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            ++  M+K+   PD ++Y+TL+ GL   G++  A  +  EM   G + D    N+L+ G 
Sbjct: 747 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 806

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            MK       ++DA ++  +M  K       TY  +I+ L K  + D+A   +   +E G
Sbjct: 807 SMKG-----DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 861

Query: 401 HIPRTITFNNVIQALCGE 418
             P   T+ ++I+ L  E
Sbjct: 862 ITPDDSTYISLIEGLTTE 879



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 147/267 (55%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D + + G   +V+ +N L+ AL M      A +   E    GLAP+ +T++I+I  +C +
Sbjct: 610 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 669

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
            +  +A ++ + M   G    V T+T L+ +L K G+++E  ++ D+  R G +P++  Y
Sbjct: 670 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 729

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+      G ++ A+E++  ++   + PD  TY  +M G C +GR +EA +L++E  E
Sbjct: 730 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE 789

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RG+ P++VT+NTL +GY  +G     + +   M  +   P  ++Y+ L+ GL K G+   
Sbjct: 790 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 849

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGL 340
           A ++ KEMV  G   D+    SL+ GL
Sbjct: 850 AENMVKEMVENGITPDDSTYISLIEGL 876



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 208/484 (42%), Gaps = 51/484 (10%)

Query: 28  KLVVFAAASLSTAESL-DLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVS 86
           K V+ A  +LS    L  L   P SL            P    + ++  +K      S +
Sbjct: 394 KSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTA 453

Query: 87  DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
             + LL AL        A   F++     L   + TF+IM+R  C+      A +++  M
Sbjct: 454 SLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM 509

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGR 205
                 PN  T+  ++   C  GR++ AL+++ +M  R G  PN  TY  ++ G C VGR
Sbjct: 510 ----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGR 565

Query: 206 VEEAYEMLMNVKNDG-LKPDVYTYTAVMDGFCKVG------------------------- 239
           V+EA ++   +   G +KP+   Y A++ G+C  G                         
Sbjct: 566 VDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYN 625

Query: 240 ----------RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
                     R  EA EL+ E   +G+ P+V T+N L NG+CKEG   K + + + M +R
Sbjct: 626 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 685

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
                 ++Y+ L+  L K G+++    +F E VR G   D  + N+L+      S     
Sbjct: 686 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI-----NSHSTSG 740

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            ++ A+++  +M KK    D  TY  ++R L    + DEA   +    E G  P  +T+N
Sbjct: 741 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 800

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            +I     +G +  AL +   M      P+  +Y+ LI  L +  +  DA  +    ++ 
Sbjct: 801 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 860

Query: 470 GVIP 473
           G+ P
Sbjct: 861 GITP 864



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 155/320 (48%), Gaps = 6/320 (1%)

Query: 62  KASPLKERIDIFDSIKKDG-TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K   + E + +FD +   G        +N L+       + +TA+ +       G+A   
Sbjct: 562 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 621

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+++++          EA ++++ M   G  P+V T+ IL+N  CK G +K+ALE+ + 
Sbjct: 622 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 681

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G +  + TY  L+  L   G+V+E  ++       G++PD+  Y A+++     G 
Sbjct: 682 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 741

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A E++ E  ++ + P+ VT+NTL  G C  G   +   L+  M +R   PD ++Y+T
Sbjct: 742 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 801

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G    G ++ A+ I  EM+  GF       N+L++GLC          +DA  + ++
Sbjct: 802 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG-----DDAENMVKE 856

Query: 361 MTKKVSVTDPGTYGIVIRTL 380
           M +     D  TY  +I  L
Sbjct: 857 MVENGITPDDSTYISLIEGL 876



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 110/208 (52%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           +K+ ++IF+++ + G   +V  +  L+ AL    + +   K F EA   G+ P+   ++ 
Sbjct: 672 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 731

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +    +   A +++  M      P+  T+  L+  LC  GR+ EA +++D+M   G
Sbjct: 732 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 791

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +P++ TYN L+ G    G V++A  +   + N G  P + TY A++ G CK G+ ++A 
Sbjct: 792 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 851

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKE 273
            ++ E +E G+TP+  T+ +L  G   E
Sbjct: 852 NMVKEMVENGITPDDSTYISLIEGLTTE 879


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 204/444 (45%), Gaps = 36/444 (8%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  +++  ++   ++  G   S+   N LL  L+  +      K        G++P+ +
Sbjct: 186 KSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVY 245

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S +I  YC   +F  A+KV+  M + G   N  T+ +L+  LC+SG ++EA      M
Sbjct: 246 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 305

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TY  L+ GLC   R  EA  +L  +    LKP+V  Y  ++DGF + G +
Sbjct: 306 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 365

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA +++ E +  GV PN +T++ L  G CK G   +   LLK M + +  PD I+Y+ +
Sbjct: 366 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 425

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK--DLLED------ 353
           + G  +    + A  +  EM   G   +    + ++ GLC     EK  DLLE+      
Sbjct: 426 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 485

Query: 354 ----------------------AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
                                 A ++F+KMTK   + D   Y  +I  L K  + +E+  
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY-DMLIT-- 448
           +     E G +P   T++ +I      G ++ A  L+  M +    P+   Y D+L +  
Sbjct: 546 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 605

Query: 449 KLDQLEKSYDACALYGAALKQGVI 472
           K D +EK     + + + L QGV+
Sbjct: 606 KSDDIEK---VSSTFKSMLDQGVM 626



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 200/466 (42%), Gaps = 71/466 (15%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +++ G   +   +N L+  L      E A  F  +   YGL P+ +T+  +I   C    
Sbjct: 270 MRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRR 329

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA+ ++D M      PNV  +  L++   + G   EA +++ +M   G +PN  TY+ 
Sbjct: 330 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDN 389

Query: 196 LLKGLCYVGRVE-----------------------------------EAYEMLMNVKNDG 220
           L++GLC +G+++                                   +A+ +L  ++N G
Sbjct: 390 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 449

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + P+VYTY+ ++ G C+ G   +A +LL E   +G+ PN   +  L +GYC+EG      
Sbjct: 450 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 509

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +   M K N LPD   Y++L+ GL K G++  +   F +M   G   +E   + L+ G 
Sbjct: 510 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 569

Query: 341 ------------------------------CMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
                                          ++S+ + D +E     F+ M  +  + D 
Sbjct: 570 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 629

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             YGI+I  L      + A   L    + G +P    ++++I  LC     +KA  +L  
Sbjct: 630 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 689

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYD---ACALYGAALKQGVIP 473
           M +    P+   Y+ LI   D L KS D   A  ++ + L +G++P
Sbjct: 690 MSKKGVDPNIVCYNALI---DGLCKSGDISYARNVFNSILAKGLVP 732



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 169/353 (47%), Gaps = 6/353 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +IFD + K      +  +N L+  L  +   E + K+F++    GL PN +T+S +I  Y
Sbjct: 510 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 569

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
               D   A +++  M D G  PN   +  L+ S  KS  +++       M   G   + 
Sbjct: 570 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 629

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           + Y  L+  L   G +E A+ +L  ++ +G  PDV+ Y++++ G CK     +A  +L+E
Sbjct: 630 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 689

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             ++GV PN+V +N L +G CK G       +   +  +  +P+ ++Y++L++G  K G 
Sbjct: 690 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 749

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I  A  ++ EM+  G   D  + + L  G C  + +    LE A  + E+M  +   +  
Sbjct: 750 ISNAFYLYNEMLATGITPDAFVYSVLTTG-CSSAGD----LEQAMFLIEEMFLRGHAS-I 803

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
            ++  ++    K  K  E L  LH  +  G +P  +T  N+I  L   GK+ +
Sbjct: 804 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSE 856



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 178/422 (42%), Gaps = 66/422 (15%)

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
           + ++ A +  SE  + G++PN +T+SIMI   C   +  +A  +++ M   G  PN   +
Sbjct: 433 HSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 492

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
             L++  C+ G +  A E+ D+M ++   P++  YN L+ GL  VGRVEE+ +    ++ 
Sbjct: 493 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 552

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE----- 273
            GL P+ +TY+ ++ G+ K G    A +L+   ++ G+ PN V +  L   Y K      
Sbjct: 553 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 612

Query: 274 ------------------------------GTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
                                         G       +L  ++K   +PD   YS+L++
Sbjct: 613 VSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLIS 672

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-----------MKSWEEKDL-- 350
           GL K      A  I  EM + G + +    N+L+ GLC             S   K L  
Sbjct: 673 GLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP 732

Query: 351 -----------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
                            + +A+ ++ +M       D   Y ++          ++A+  +
Sbjct: 733 NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLI 792

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
                 GH   + +FNN++   C  GK+ + L LL ++     +P+  + + +I+ L + 
Sbjct: 793 EEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEA 851

Query: 454 EK 455
            K
Sbjct: 852 GK 853



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 183/419 (43%), Gaps = 45/419 (10%)

Query: 53  QAQRFVDRIKASPLKER----IDIFDS-IKKDGTNWSVSDFNDLLMALVMLNEQ------ 101
            A++ V R+  + LK      ID+ +S  K D      S F  +L   VML+ +      
Sbjct: 577 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 636

Query: 102 ---------ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
                    E A +  S     G  P+   +S +I   C   D  +A  ++D M   G  
Sbjct: 637 HNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 696

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           PN+  +  L++ LCKSG +  A  V + +   G  PN  TY  L+ G C VG +  A+ +
Sbjct: 697 PNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYL 756

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G+ PD + Y+ +  G    G   +AM L+ E   RG   ++ +FN L +G+CK
Sbjct: 757 YNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCK 815

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   + + LL ++  R  +P+ ++   +++GL + GK+    +IF E+ +   E   R 
Sbjct: 816 RGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARH 875

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            +SL   +  +     D+++D                      +IR   K    D+AL+ 
Sbjct: 876 FSSLFMDMINQGKIPLDVVDD----------------------MIRDHCKEGNLDKALM- 912

Query: 393 LHHAIEMGHIPRTIT-FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           L   I     P   + +  ++  LC +GK+ +AL LL  M +    PS     +L+T L
Sbjct: 913 LRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNL 971



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 161/362 (44%), Gaps = 43/362 (11%)

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D+G H +     +LV++  KSGR+++A EV+  M   G  P+I+  N LLK L     + 
Sbjct: 168 DSG-HRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMA 226

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
             +++   +   G+ PDVYTY+ +++ +CKV   + A ++L E  ERG   N VT+N L 
Sbjct: 227 LLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLI 286

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK---------------WGKIR 312
            G C+ G   +  G  K M+    +PD  +Y  L+NGL K                 +++
Sbjct: 287 AGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 346

Query: 313 PAVSIF--------------------KEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLL 351
           P V ++                    KEMV  G + ++   ++L+RGLC M   +   LL
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 406

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
                  ++M +     D  TY ++I    +     +A   L      G  P   T++ +
Sbjct: 407 ------LKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIM 460

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I  LC  G+ +KA  LL  M      P+   Y  LI+   +      AC ++    K  V
Sbjct: 461 IHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 520

Query: 472 IP 473
           +P
Sbjct: 521 LP 522



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 122/272 (44%), Gaps = 23/272 (8%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F+SI   G   +   +  L+     + +   A   ++E  + G+ P+++ +S++    
Sbjct: 720 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 779

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ-MGRIGCKPN 189
            +  D  +A  +I+ MF  G H ++++F  LV+  CK G+++E L++L   MGR G  PN
Sbjct: 780 SSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGR-GLVPN 837

Query: 190 IQTYNCLLKGLCYVGRVEEAY-------------------EMLMNVKNDGLKPDVYTYTA 230
             T   ++ GL   G++ E +                    + M++ N G  P       
Sbjct: 838 ALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDM 897

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           + D  CK G  ++A+ L +  + +       ++  + +  C++G   + + LLK M KR 
Sbjct: 898 IRD-HCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 956

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
             P +     LL  L   G I+   ++   M+
Sbjct: 957 ICPSENQCLILLTNLHTSGYIQEHNTVLDNML 988



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 25/215 (11%)

Query: 10  FIFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKEN-------PRSLQAQRFVDRI- 61
           F+      R H  I  FN LV          E+L L          P +L  +  +  + 
Sbjct: 790 FLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLS 849

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L E   IF  +++  +  +   F+ L M   M+N+ +  +    +           
Sbjct: 850 EAGKLSEVHTIFVELQQKTSESAARHFSSLFMD--MINQGKIPLDVVDD----------- 896

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
               MIR +C + +  +A  + D +         +++  +V++LC+ G+L EAL +L +M
Sbjct: 897 ----MIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 952

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
            + G  P+      LL  L   G ++E   +L N+
Sbjct: 953 DKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNM 987



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 102/274 (37%), Gaps = 24/274 (8%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV-----------------TFNT 265
           PD + + A+    C     N A  LL + I    +P VV                   + 
Sbjct: 122 PDAFAHLAM--SLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDV 179

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L + Y K G       ++ +M+ R   P     + LL  LL+   +     + + MV  G
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              D    ++L+   C K  E     + A +V  +M ++    +  TY ++I  L +   
Sbjct: 240 ISPDVYTYSTLIEAYC-KVRE----FDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 294

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            +EA        + G +P   T+  +I  LC   + ++A  LL  M      P+   Y  
Sbjct: 295 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 354

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
           LI    +   + +A  +    +  GV P +   D
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYD 388


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 172/348 (49%), Gaps = 8/348 (2%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC-MFDNGYHPNVTTFTI 160
           E AV F   +    + P+  +F+ ++  YC K  F +  K   C +   G  P+V +  I
Sbjct: 246 EDAVLFLRTSEWKDIGPSVVSFNSIMSGYC-KLGFVDMAKSFFCTVLKCGLVPSVYSHNI 304

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+N LC  G + EALE+   M + G +P+  TYN L KG   +G +  A+E++ ++ + G
Sbjct: 305 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 364

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN-VVTFNTLFNGYCKEGTPMKG 279
           L PDV TYT ++ G C++G  +  + LL + + RG   N ++  + + +G CK G   + 
Sbjct: 365 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 424

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + L   MK     PD ++YS +++GL K GK   A+ ++ EM       + R   +LL G
Sbjct: 425 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 484

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC     +K +L +A  + + +       D   Y IVI    K    +EAL      IE 
Sbjct: 485 LC-----QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 539

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           G  P   TFN++I   C    I +A  +L ++  +   PS  SY  L+
Sbjct: 540 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 587



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 157/332 (47%), Gaps = 9/332 (2%)

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           S+M+   C      EA  + + M  +G  P++  ++I+++ LCK G+   AL + D+M  
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
               PN +T+  LL GLC  G + EA  +L ++ + G   D+  Y  V+DG+ K G   E
Sbjct: 469 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 528

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A+EL    IE G+TP+V TFN+L  GYCK     +   +L ++K     P  +SY+TL++
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 588

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD--------LLEDAY 355
                G  +    + +EM   G        + + +GLC + W+ ++        + E   
Sbjct: 589 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCK 647

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           Q    M  +    D  TY  +I+ L + K    A + L           + T+N +I +L
Sbjct: 648 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 707

Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           C  G I KA   ++ + E     S+ +Y  LI
Sbjct: 708 CVYGYIRKADSFIYSLQEQNVSLSKFAYTTLI 739



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 183/424 (43%), Gaps = 27/424 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F+ +K DG +  +  ++ ++  L  L + + A+  + E     + PNS 
Sbjct: 417 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 476

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T   ++   C K    EAR ++D +  +G   ++  + I+++   KSG ++EALE+   +
Sbjct: 477 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 536

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ T+N L+ G C    + EA ++L  +K  GL P V +YT +MD +   G +
Sbjct: 537 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 596

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYC------------KEGTPMKGVGLLKLMKKR 289
               EL  E    G+ P  VT++ +F G C            +E    K    L+ M+  
Sbjct: 597 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 656

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD+I+Y+T++  L +   +  A    + M     +      N L+  LC+  +  K 
Sbjct: 657 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK- 715

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
              D++ ++    + VS++    Y  +I+        + A+   H  +  G       ++
Sbjct: 716 --ADSF-IYSLQEQNVSLSKFA-YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 771

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            VI  LC    ++++     LM      P           LD  E    +  L    +K 
Sbjct: 772 AVINRLCRRHLVNESKFFFCLMLSQGISPD----------LDICEVMIKSDELLSWTIKW 821

Query: 470 GVIP 473
           G++P
Sbjct: 822 GLLP 825



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 41/318 (12%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N  T++ +V+ LC+  +L++A+  L         P++ ++N ++ G C +G V+ A    
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 287

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             V   GL P VY++  +++G C VG   EA+EL ++  + GV P+ VT+N L  G+   
Sbjct: 288 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 347

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G       +++ M  +   PD I+Y+ LL G  + G I   + + K+M+  GFE++  + 
Sbjct: 348 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 407

Query: 334 NS-LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            S +L GLC                                        K  + DEAL  
Sbjct: 408 CSVMLSGLC----------------------------------------KTGRIDEALSL 427

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            +     G  P  + ++ VI  LC  GK D AL L   M +   +P+  ++  L+  L Q
Sbjct: 428 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 487

Query: 453 LEKSYDACALYGAALKQG 470
                +A +L  + +  G
Sbjct: 488 KGMLLEARSLLDSLISSG 505



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 176/402 (43%), Gaps = 27/402 (6%)

Query: 92  LMALVMLNEQETAVKFFSEASS-YGLAPNSWTFSIMIRCYCNKNDFFEARKVID------ 144
           +M  +M    + +V FF E    Y    +S++  ++      +  F E + +++      
Sbjct: 89  IMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEE 148

Query: 145 ---C-MFDNGYHPNVTTFTILVNSLCKSGRLK---EALEVLDQMGRIGCKPNIQTYNCLL 197
              C +  N +    +T  +    L  S RL+   ++L +L +M       + Q+YN +L
Sbjct: 149 GTLCELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVL 208

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
                  ++ + Y+ + + KN+      +TY+ V+DG C+  +  +A+  L  +  + + 
Sbjct: 209 YHFRETDKMWDVYKEIKD-KNE------HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIG 261

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+VV+FN++ +GYCK G           + K   +P   S++ L+NGL   G I  A+ +
Sbjct: 262 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 321

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             +M + G E D    N L +G  +       ++  A++V   M  K    D  TY I++
Sbjct: 322 ASDMNKHGVEPDSVTYNILAKGFHLLG-----MISGAWEVIRDMLDKGLSPDVITYTILL 376

Query: 378 RTLGKGKKTDEALIHLHHAIEMG-HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
               +    D  L+ L   +  G  +   I  + ++  LC  G+ID+AL L   M     
Sbjct: 377 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 436

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQ 478
            P   +Y ++I  L +L K   A  LY     + ++P  +  
Sbjct: 437 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 478


>gi|125539212|gb|EAY85607.1| hypothetical protein OsI_06979 [Oryza sativa Indica Group]
          Length = 538

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 196/428 (45%), Gaps = 21/428 (4%)

Query: 29  LVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSD 87
           + VF+    + A+  D    P  L     V+ + +A    E +  FD +   G   + S 
Sbjct: 72  VAVFSELKWTAADGGDGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASS 131

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            N L+      +E + A +   ++   G+ P+  T+S +I   C      EA  V+D M 
Sbjct: 132 QNILIKMHARRSEFDLAWELIHKS---GVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWML 188

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +    P V T+T +V + C+ GR+ EA  ++ +M R+GC PN+ TYN L++ LC   + +
Sbjct: 189 EKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFD 248

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           E  ++LM       KP   TY   M+G CK G++ EA+ELL+  +  G+ P   T++ L 
Sbjct: 249 EVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILL 308

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           N  C     +  + LL+   +       ++Y+T+++ L + GK R  + +  +M++ G E
Sbjct: 309 NCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIE 368

Query: 328 VDERMMNSLLRGLCM--KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            + R  N L+R LC+  KS   K L+    Q F          +  TY I++       K
Sbjct: 369 PNTRTFNILIRSLCVGGKSSLAKSLIHS--QGF--------AANVVTYNILLHWFYYHGK 418

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             EA   +    E    P  +T+  +I  LC E K D A            + S  S D+
Sbjct: 419 LTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACFL-----KSLTSGLSMDV 473

Query: 446 LITKLDQL 453
           L   L++L
Sbjct: 474 LTVLLNRL 481



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 203/424 (47%), Gaps = 34/424 (8%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSD------------FNDLLMALVMLNEQETAVKFFSE 110
           A  + E + +F  +K     W+ +D            +N L+ AL     +  A+K F E
Sbjct: 65  AGDVDEVVAVFSELK-----WTAADGGDGGAPPNVLCYNTLVNALAEAGREGEALKAFDE 119

Query: 111 ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR 170
             + G+APN+ + +I+I+ +  +++F  A ++I     +G  P+V T++ L+  LC++G+
Sbjct: 120 MLASGVAPNASSQNILIKMHARRSEFDLAWELI---HKSGVEPDVGTYSTLIAGLCRAGK 176

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           + EA  VLD M    C+P +QTY  +++  C  GR+ EA  ++  ++  G  P+V TY  
Sbjct: 177 VVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNV 236

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++   C   + +E  ++L E+  +   P+ VT+N   NG CK+G   + + LL +M    
Sbjct: 237 LIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEG 296

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKD 349
             P   ++S LLN L    ++  A+ + +      +       N+++  LC M  W    
Sbjct: 297 LEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWR--- 353

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD--EALIHLHHAIEMGHIPRTIT 407
                 ++   M KK    +  T+ I+IR+L  G K+   ++LIH       G     +T
Sbjct: 354 ---GIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIH-----SQGFAANVVT 405

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N ++      GK+ +A  L+ +M E    P   +Y ++I  L +  K   A A +  +L
Sbjct: 406 YNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACFLKSL 465

Query: 468 KQGV 471
             G+
Sbjct: 466 TSGL 469



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 147/326 (45%), Gaps = 15/326 (4%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQM-------GRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + + + +L  +G + E + V  ++       G  G  PN+  YN L+  L   GR  EA 
Sbjct: 55  YNVAMKALALAGDVDEVVAVFSELKWTAADGGDGGAPPNVLCYNTLVNALAEAGREGEAL 114

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           +    +   G+ P+  +   ++    +    + A EL++++   GV P+V T++TL  G 
Sbjct: 115 KAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIHKS---GVEPDVGTYSTLIAGL 171

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+ G  ++  G+L  M ++NC P   +Y+ ++    + G+I  A  +  EM R G   + 
Sbjct: 172 CRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNV 231

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N L+R LC     + D  ++  QV  + + K       TY I +  L K  K  EAL
Sbjct: 232 VTYNVLIRALC-----DDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEAL 286

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             L   +  G  P   T++ ++  LC   ++  A+ LL    E        +Y+ +++ L
Sbjct: 287 ELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSL 346

Query: 451 DQLEKSYDACALYGAALKQGVIPQRK 476
            ++ K      L    +K+G+ P  +
Sbjct: 347 CEMGKWRGIMKLLTDMIKKGIEPNTR 372


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 200/434 (46%), Gaps = 18/434 (4%)

Query: 49  PRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF- 107
           PRS    +   R+ +   ++ +D+FD + + G    +   N  L  +   N      +F 
Sbjct: 17  PRSEGTIQDRARVGSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRFN 76

Query: 108 -FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
             + A +  + P   T+ I+I C C+          +  +   G+      F  L+  LC
Sbjct: 77  RMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLC 136

Query: 167 KSGRLKEALE-VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKP 223
              R  +A++ VL  M  +GC PN+ ++  +LKGLC+  R +EA E+L  + +DG    P
Sbjct: 137 ADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLP 196

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V +Y+ V DG  K G  ++A     E ++R + PNVVT++++    CK     K + + 
Sbjct: 197 NVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVH 256

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M K    P+  +Y++L++G    G++  A+   ++M   G E +    +S +  LC  
Sbjct: 257 DRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLC-- 314

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH----AIEM 399
              +     +A ++F  M K+    D  TY     +L  G   + AL+ +H      ++ 
Sbjct: 315 ---KNGRCTEARKIFYSMVKRGLKPDITTY----SSLLHGYAIEGALVEMHGLFDLMVQS 367

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
              P    FN +I A   +GK+D+A+L+   M      P+  +Y+ LI    ++ +  +A
Sbjct: 368 DMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENA 427

Query: 460 CALYGAALKQGVIP 473
            AL+   +  GV P
Sbjct: 428 LALFQEMVSNGVSP 441



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 168/340 (49%), Gaps = 43/340 (12%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           FN LL  L      + A+       +  G  PN ++ +I+++  C++N   EA +++  M
Sbjct: 128 FNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMM 187

Query: 147 FDNG-----------------------------YH--------PNVTTFTILVNSLCKSG 169
            D+G                             Y         PNV T++ ++ +LCK  
Sbjct: 188 ADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQ 247

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
            + +A+EV D+M + G  PN  TY  L+ G C  G++ EA + L  + ++G++P+V TY+
Sbjct: 248 AMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYS 307

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           + MD  CK GR  EA ++    ++RG+ P++ T+++L +GY  EG  ++  GL  LM + 
Sbjct: 308 SFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQS 367

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
           +  PD   ++TL+    K GK+  A+ +F +M   G + +    N+L+ G C  +     
Sbjct: 368 DMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITR---- 423

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
            +E+A  +F++M       +  TY I+++ L +  +T  A
Sbjct: 424 -MENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTA 462



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 128/242 (52%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  ++ ++ AL      + A++        G+ PN +T++ ++  +C+     EA K +
Sbjct: 232 NVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFL 291

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           + M  NG  PNV T++  ++ LCK+GR  EA ++   M + G KP+I TY+ LL G    
Sbjct: 292 EKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIE 351

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G + E + +   +    ++PD Y +  ++    K G+ +EAM + ++   +G+ PN VT+
Sbjct: 352 GALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTY 411

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           NTL NGYCK       + L + M      P+ I+Y+ +L GL + G+   A   + ++++
Sbjct: 412 NTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIK 471

Query: 324 FG 325
            G
Sbjct: 472 SG 473



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 144/276 (52%), Gaps = 2/276 (0%)

Query: 67  KERIDIFDSIKKDGTNW--SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           +E +++   +  DG     +V  ++ +   L+   + + A   + E     + PN  T+S
Sbjct: 178 QEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYS 237

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +I   C      +A +V D M  NG  PN  T+T LV+  C SG+L EA++ L++M   
Sbjct: 238 SIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSN 297

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G +PN+ TY+  +  LC  GR  EA ++  ++   GLKPD+ TY++++ G+   G   E 
Sbjct: 298 GVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEM 357

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L +  ++  + P+   FNTL     K+G   + + +   M+ +   P+ ++Y+TL+NG
Sbjct: 358 HGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLING 417

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
             K  ++  A+++F+EMV  G   +    N +L+GL
Sbjct: 418 YCKITRMENALALFQEMVSNGVSPNFITYNIMLQGL 453



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 35/229 (15%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + +++ D + K+G   +   +  L+       +   A+KF  +  S G+ PN  
Sbjct: 245 KGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVV 304

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT------------------------ 157
           T+S  +   C      EARK+   M   G  P++TT                        
Sbjct: 305 TYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLM 364

Query: 158 -----------FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
                      F  L+ +  K G++ EA+ V  +M   G KPN  TYN L+ G C + R+
Sbjct: 365 VQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRM 424

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           E A  +   + ++G+ P+  TY  ++ G  + GR+  A E   + I+ G
Sbjct: 425 ENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSG 473



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 1/175 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +    F+D + K     E   IF S+ K G    ++ ++ LL    +          
Sbjct: 301 PNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGL 360

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F       + P+ + F+ +I     +    EA  V   M   G  PN  T+  L+N  CK
Sbjct: 361 FDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCK 420

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
             R++ AL +  +M   G  PN  TYN +L+GL   GR   A E  + +   G K
Sbjct: 421 ITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSGKK 475



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 49/104 (47%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+ A     + + A+  FS+    GL PN  T++ +I  YC       A  +   M 
Sbjct: 376 FNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMV 435

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            NG  PN  T+ I++  L ++GR   A E   Q+ + G K  I+
Sbjct: 436 SNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSGKKDLIE 479


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 197/414 (47%), Gaps = 7/414 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A  L++ + +   +++ G   ++   N  +   V  N  E A++F       G+ PN  
Sbjct: 257 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 316

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ MIR YC+ +   EA +++D M   G  P+  ++  ++  LCK  R+ E  +++ +M
Sbjct: 317 TYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 376

Query: 182 GR-IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            +  G   +  TYN L+  L      +EA   L + +  G + D   Y+A++   CK GR
Sbjct: 377 AKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGR 436

Query: 241 SNEAMELLNEAIERG-VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
            +EA +L+NE + +G   P+VVT+  + NG+C+ G   K   LL++M      P+ +SY+
Sbjct: 437 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYT 496

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
            LLNGL + GK   A    +EM+    E      NS+   + M    ++  L +A  V  
Sbjct: 497 ALLNGLCRTGKSLEA----REMMNMS-EEQWWSPNSITYSVLMHGLRKEGKLSEACDVVR 551

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           +M  K     P    +++++L +  +T EA   +   +  G     + F  VI   C   
Sbjct: 552 EMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQND 611

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           ++D AL +L  MY   K     +Y  L+  L +  +  +A  L    L +G+ P
Sbjct: 612 ELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDP 665



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 178/359 (49%), Gaps = 8/359 (2%)

Query: 111 ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR 170
           A  +GL  +  T++ +I      +   EA   +    + G+  +   ++ +V++LCK GR
Sbjct: 377 AKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGR 436

Query: 171 LKEALEVLDQMGRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           + EA +++++M   G C P++ TY  ++ G C +G V++A ++L  +   G KP+  +YT
Sbjct: 437 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYT 496

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           A+++G C+ G+S EA E++N + E+  +PN +T++ L +G  KEG   +   +++ M  +
Sbjct: 497 ALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLK 556

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P  +  + LL  L + G+   A    +E +  G  ++     +++ G C     + D
Sbjct: 557 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC-----QND 611

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            L+ A  V + M       D  TY  ++  LGK  +  EA   +   +  G  P  +T+ 
Sbjct: 612 ELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYR 671

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
            VI   C   K+D  + +L  M    K   +T Y+ +I KL  L K  +A  L G  L+
Sbjct: 672 TVIHRYCQMEKVDDLVAILEKMILRQK--CKTIYNQVIEKLCGLGKLEEADKLLGKVLR 728



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 186/381 (48%), Gaps = 14/381 (3%)

Query: 99  NEQETAVKFFSEAS-SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           +++  A+KFF  A   +    +   +  M+           AR+V+  M   G +     
Sbjct: 188 DDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEA 247

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F  ++ S  ++G+L++AL+VL  M R G +PN+   N  +       R+E+A   L  ++
Sbjct: 248 FLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 307

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
             G+ P+V TY  ++ G+C + R  EA+ELL++   +G  P+ V++ T+    CKE   +
Sbjct: 308 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIV 367

Query: 278 KGVGLLKLMKKRNCL-PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
           +   L+K M K + L  D+++Y+TL++ L K      A+   K+    GF +D+   +++
Sbjct: 368 EVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAI 427

Query: 337 LRGLCMKSW--EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA--LIH 392
           +  LC +    E KDL+       E ++K     D  TY  V+    +  + D+A  L+ 
Sbjct: 428 VHALCKEGRMSEAKDLIN------EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 481

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           + H    G+ P T+++  ++  LC  GK  +A  ++ +  E    P+  +Y +L+  L +
Sbjct: 482 IMHT--HGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRK 539

Query: 453 LEKSYDACALYGAALKQGVIP 473
             K  +AC +    + +G  P
Sbjct: 540 EGKLSEACDVVREMVLKGFFP 560



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 157/342 (45%), Gaps = 43/342 (12%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYG-LAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           ++ ++ AL        A    +E  S G   P+  T++ ++  +C   +  +A+K++  M
Sbjct: 424 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIM 483

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
             +GY PN  ++T L+N LC++G+  EA E+++        PN  TY+ L+ GL   G++
Sbjct: 484 HTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKL 543

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            EA +++  +   G  P       ++   C+ GR++EA + + E + +G   NVV F T+
Sbjct: 544 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 603

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G+C+       + +L  M   N   D  +Y+TL++ L K G+I  A  + K+M+  G 
Sbjct: 604 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGI 663

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           +                                          P TY  VI    + +K 
Sbjct: 664 D----------------------------------------PTPVTYRTVIHRYCQMEKV 683

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D+ +  L   I +    +TI +N VI+ LCG GK+++A  LL
Sbjct: 684 DDLVAILEKMI-LRQKCKTI-YNQVIEKLCGLGKLEEADKLL 723



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 139/288 (48%), Gaps = 7/288 (2%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +  ++     L E + A K      ++G  PN+ +++ ++   C      EAR++++
Sbjct: 457 VVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMN 516

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
              +  + PN  T+++L++ L K G+L EA +V+ +M   G  P     N LL+ LC  G
Sbjct: 517 MSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDG 576

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R  EA + +    N G   +V  +T V+ GFC+    + A+ +L++        +V T+ 
Sbjct: 577 RTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYT 636

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           TL +   K+G   +   L+K M  +   P  ++Y T+++   +  K+   V+I ++M+  
Sbjct: 637 TLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMIL- 695

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
             +  + + N ++  LC         LE+A ++  K+ +  S +D  T
Sbjct: 696 -RQKCKTIYNQVIEKLCGLGK-----LEEADKLLGKVLRTASRSDAKT 737



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 4/234 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E  D+   +   G      + N LL +L        A KF  E  + G A N  
Sbjct: 539 KEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVV 598

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  +C  ++   A  V+D M+    H +V T+T LV++L K GR+ EA E++ +M
Sbjct: 599 NFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKM 658

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT-YTAVMDGFCKVGR 240
              G  P   TY  ++   C + +V++   +L  +    L+    T Y  V++  C +G+
Sbjct: 659 LHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMI---LRQKCKTIYNQVIEKLCGLGK 715

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
             EA +LL + +      +  T   L  GY K G P+    +   M  RN +PD
Sbjct: 716 LEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGVPLLAYKVACRMFNRNLIPD 769


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 172/348 (49%), Gaps = 8/348 (2%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC-MFDNGYHPNVTTFTI 160
           E AV F   +    + P+  +F+ ++  YC K  F +  K   C +   G  P+V +  I
Sbjct: 217 EDAVLFLRTSEWKDIGPSVVSFNSIMSGYC-KLGFVDMAKSFFCTVLKCGLVPSVYSHNI 275

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           L+N LC  G + EALE+   M + G +P+  TYN L KG   +G +  A+E++ ++ + G
Sbjct: 276 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 335

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN-VVTFNTLFNGYCKEGTPMKG 279
           L PDV TYT ++ G C++G  +  + LL + + RG   N ++  + + +G CK G   + 
Sbjct: 336 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 395

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           + L   MK     PD ++YS +++GL K GK   A+ ++ EM       + R   +LL G
Sbjct: 396 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 455

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
           LC     +K +L +A  + + +       D   Y IVI    K    +EAL      IE 
Sbjct: 456 LC-----QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 510

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           G  P   TFN++I   C    I +A  +L ++  +   PS  SY  L+
Sbjct: 511 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 558



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 171/377 (45%), Gaps = 10/377 (2%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT-FSIMIRCYCNKNDFFE 138
           G +  V  +  LL     L   +  +    +  S G   NS    S+M+   C      E
Sbjct: 335 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 394

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A  + + M  +G  P++  ++I+++ LCK G+   AL + D+M      PN +T+  LL 
Sbjct: 395 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 454

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC  G + EA  +L ++ + G   D+  Y  V+DG+ K G   EA+EL    IE G+TP
Sbjct: 455 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 514

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           +V TFN+L  GYCK     +   +L ++K     P  +SY+TL++     G  +    + 
Sbjct: 515 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 574

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKD--------LLEDAYQVFEKMTKKVSVTDP 370
           +EM   G        + + +GLC + W+ ++        + E   Q    M  +    D 
Sbjct: 575 REMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 633

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I+ L + K    A + L           + T+N +I +LC  G I KA   ++ 
Sbjct: 634 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYS 693

Query: 431 MYEHAKIPSRTSYDMLI 447
           + E     S+ +Y  LI
Sbjct: 694 LQEQNVSLSKFAYTTLI 710



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 183/424 (43%), Gaps = 27/424 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F+ +K DG +  +  ++ ++  L  L + + A+  + E     + PNS 
Sbjct: 388 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 447

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T   ++   C K    EAR ++D +  +G   ++  + I+++   KSG ++EALE+   +
Sbjct: 448 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 507

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ T+N L+ G C    + EA ++L  +K  GL P V +YT +MD +   G +
Sbjct: 508 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 567

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYC------------KEGTPMKGVGLLKLMKKR 289
               EL  E    G+ P  VT++ +F G C            +E    K    L+ M+  
Sbjct: 568 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 627

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD+I+Y+T++  L +   +  A    + M     +      N L+  LC+  +  K 
Sbjct: 628 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK- 686

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
              D++ ++    + VS++    Y  +I+        + A+   H  +  G       ++
Sbjct: 687 --ADSF-IYSLQEQNVSLS-KFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 742

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            VI  LC    ++++     LM      P           LD  E    +  L    +K 
Sbjct: 743 AVINRLCRRHLVNESKFFFCLMLSQGISPD----------LDICEVMIKSDELLSWTIKW 792

Query: 470 GVIP 473
           G++P
Sbjct: 793 GLLP 796



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 41/318 (12%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N  T++ +V+ LC+  +L++A+  L         P++ ++N ++ G C +G V+ A    
Sbjct: 199 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 258

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             V   GL P VY++  +++G C VG   EA+EL ++  + GV P+ VT+N L  G+   
Sbjct: 259 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 318

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G       +++ M  +   PD I+Y+ LL G  + G I   + + K+M+  GFE++  + 
Sbjct: 319 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 378

Query: 334 NS-LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            S +L GLC                                        K  + DEAL  
Sbjct: 379 CSVMLSGLC----------------------------------------KTGRIDEALSL 398

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            +     G  P  + ++ VI  LC  GK D AL L   M +   +P+  ++  L+  L Q
Sbjct: 399 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 458

Query: 453 LEKSYDACALYGAALKQG 470
                +A +L  + +  G
Sbjct: 459 KGMLLEARSLLDSLISSG 476



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 16/315 (5%)

Query: 168 SGRLK---EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           S RL+   ++L +L +M       + Q+YN +L       ++ + Y+ + + KN+     
Sbjct: 147 SSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD-KNE----- 200

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
            +TY+ V+DG C+  +  +A+  L  +  + + P+VV+FN++ +GYCK G          
Sbjct: 201 -HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 259

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            + K   +P   S++ L+NGL   G I  A+ +  +M + G E D    N L +G  +  
Sbjct: 260 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 319

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG-HIP 403
                ++  A++V   M  K    D  TY I++    +    D  L+ L   +  G  + 
Sbjct: 320 -----MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 374

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
             I  + ++  LC  G+ID+AL L   M      P   +Y ++I  L +L K   A  LY
Sbjct: 375 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 434

Query: 464 GAALKQGVIPQRKPQ 478
                + ++P  +  
Sbjct: 435 DEMCDKRILPNSRTH 449


>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Glycine max]
          Length = 572

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 200/423 (47%), Gaps = 29/423 (6%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V+    LL  L   N+   AV+        G+ P++ +++ ++   C + +   A
Sbjct: 94  GQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYA 153

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            ++++ M  +G+  N  T+  LV  LC  G L ++L++LD++ + G  PN  TY+ LL+ 
Sbjct: 154 IQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEA 213

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
                 V+EA ++L ++   G +P++ +Y  ++ G CK GR+ EA++L  E   +G +P+
Sbjct: 214 AYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPS 273

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VV+FN L    C EG   +   LL  M K +  P  ++Y+ L+  L   G+   A  +  
Sbjct: 274 VVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLD 333

Query: 320 EMVRFGFEVDERMMNSLLRGLC-----------------------------MKSWEEKDL 350
           EM R GF+      N ++  LC                             +    E+  
Sbjct: 334 EMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSAISMLSEQGK 393

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           +++A+ + + +  K +      Y  +I +L +   T  A   L+   + G  P + T+++
Sbjct: 394 VQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSS 453

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I+ +C EG +D+AL +  ++ E+   P   +Y+ LI    + +++  +  ++   + +G
Sbjct: 454 LIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKG 513

Query: 471 VIP 473
            +P
Sbjct: 514 CVP 516



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 188/393 (47%), Gaps = 9/393 (2%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I + + ++  G   +   +N L+  L M      +++     +  GL PN++T+S ++  
Sbjct: 154 IQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEA 213

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
              +    EA K++D +   G  PN+ ++ +L+  LCK GR +EA+++  ++   G  P+
Sbjct: 214 AYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPS 273

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + ++N LL+ LCY GR EEA E+L  +  +   P V TY  ++      GR+ +A ++L+
Sbjct: 274 VVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLD 333

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E    G   +  ++N +    CKEG     +  L  M  R C P++ +YS  ++ L + G
Sbjct: 334 EMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSA-ISMLSEQG 392

Query: 310 KIRPAVSIFKEM-VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           K++ A  I + +  +  F + +   N L+  LC K          A+Q+  +MTK     
Sbjct: 393 KVQEAFFIIQSLGSKQNFPMHDFYKN-LIASLCRKGNTYP-----AFQMLYEMTKYGFTP 446

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  TY  +IR + +    DEAL       E  H P    +N +I   C   + D ++ + 
Sbjct: 447 DSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGFCKAQRTDLSIEIF 506

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            +M     +P+  +Y +L+  L   E+  D  A
Sbjct: 507 LMMVNKGCVPNENTYTILVEGL-AFEEETDIAA 538



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 149/311 (47%), Gaps = 7/311 (2%)

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
           ++A   ++ +   G  P V   T L+  LCK  + ++A+ V++ M   G  P+  +Y  L
Sbjct: 81  YDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHL 140

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           +  LC  G V  A +++  ++  G   +  TY  ++ G C  G  N++++LL+   ++G+
Sbjct: 141 VNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGL 200

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            PN  T++ L     KE    + + LL  +  +   P+ +SY+ LL GL K G+   A+ 
Sbjct: 201 IPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIK 260

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
           +F+E+   GF       N LLR LC +  WEE      A ++  +M K+       TY I
Sbjct: 261 LFQELPVKGFSPSVVSFNILLRSLCYEGRWEE------ANELLAEMDKEDQPPSVVTYNI 314

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I +L    +T++A   L      G      ++N +I  LC EGK+D  L  L  M    
Sbjct: 315 LITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRR 374

Query: 436 KIPSRTSYDML 446
             P+  +Y  +
Sbjct: 375 CHPNEGTYSAI 385



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 143/319 (44%), Gaps = 40/319 (12%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           +E I +F  +   G + SV  FN LL +L      E A +  +E       P+  T++I+
Sbjct: 256 EEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNIL 315

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           I          +A KV+D M  +G+  + T++  ++  LCK G++   L+ LDQM    C
Sbjct: 316 ITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRC 375

Query: 187 KPNIQTYNC----------------------------------LLKGLCYVGRVEEAYEM 212
            PN  TY+                                   L+  LC  G    A++M
Sbjct: 376 HPNEGTYSAISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQM 435

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G  PD YTY++++ G C+ G  +EA+++     E    P++  +N L  G+CK
Sbjct: 436 LYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGFCK 495

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                  + +  +M  + C+P++ +Y+ L+ GL    +   A  + KE+      + + +
Sbjct: 496 AQRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETDIAADLMKELY-----LKKVL 550

Query: 333 MNSLLRGLCMKSWEEKDLL 351
             S +  LCM+ ++ K+L+
Sbjct: 551 SQSTVERLCMQ-YDIKELI 568


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 163/349 (46%), Gaps = 1/349 (0%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G   +V   N LL  L+  +  +   + ++   S  L P   T+++++   C + D  
Sbjct: 144 KVGAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVL 203

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
            A+ +I  M   G  P V  +T L++ LC   +L EA  +  QM   G  PN+ TYN L+
Sbjct: 204 RAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLM 263

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G C    V++A  +   + +DGL+P+V T+  ++D  CKV     A     +  + GV 
Sbjct: 264 DGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVV 323

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PNVV FN+L +GY K G   +   LL  M+K    PD  +YS L+    + G +  A  I
Sbjct: 324 PNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDI 383

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL-LEDAYQVFEKMTKKVSVTDPGTYGIV 376
            K M + G   +  + NSL+ G C +   EK L +  A + F  M +     D   Y ++
Sbjct: 384 LKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVM 443

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           ++     K   + ++     I+MG +P  +T   V +     G +  AL
Sbjct: 444 LQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSAL 492



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 148/297 (49%), Gaps = 12/297 (4%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           K G   +V  +  L+  L   ++   A   F +    G+ PN +T+++++  YC   +  
Sbjct: 214 KKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVK 273

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +A  +   M D+G  PNV TF IL+++LCK   L  A     QM + G  PN+  +N L+
Sbjct: 274 QALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLI 333

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G    G   EA ++L+ ++   + PDV+TY+ ++   C++G   EA ++L    + GV 
Sbjct: 334 DGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVP 393

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMK-----KRNCL-PDKISYSTLLNGLLKWGKI 311
            N V +N+L +GYCKEG   K + + K  K     +RN L PD ++Y+ +L G L    +
Sbjct: 394 ANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHM 453

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGL----CMKS--WEEKDLLEDAYQVFEKMT 362
              + +  +M++ G   +E     + RG      +KS  W  +DL E   +  E  +
Sbjct: 454 ADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSALWCSRDLTESCPRTLESQS 510



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 6/219 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K + +K+ + ++  +  DG   +V  F  L+ AL  + E   A +FF + + +G+ PN  
Sbjct: 268 KTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVV 327

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  Y    +  EA  ++  M      P+V T++IL+ + C+ G ++EA ++L +M
Sbjct: 328 VFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRM 387

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM------LMNVKNDGLKPDVYTYTAVMDGF 235
            + G   N   YN L+ G C  G +E+A E+        +++ +GL+PD   Y  ++ G 
Sbjct: 388 EKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGH 447

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
                  + M L  + I+ G+ PN VT   +  GY   G
Sbjct: 448 LNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNG 486



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 135/318 (42%), Gaps = 43/318 (13%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N + F +L+ +  + G + EAL V     ++G  P +Q  N LL GL      +  +E+ 
Sbjct: 118 NPSVFGVLIIAFSEVGLVDEALRV---YLKVGAFPAVQACNALLNGLLKKSSFDIMWELY 174

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
            N+ +  L P V TY  ++D  C+ G    A  L++E +++G+ P VV + TL +G C E
Sbjct: 175 NNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSE 234

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
              M+   + + MK     P+  +Y+ L++G  K   ++ A+ +++ M            
Sbjct: 235 SKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGM------------ 282

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
                            L+D  Q            +  T+GI+I  L K ++   A    
Sbjct: 283 -----------------LDDGLQ-----------PNVVTFGILIDALCKVRELLAARRFF 314

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
               + G +P  + FN++I      G   +A  LL  M +    P   +Y +LI    +L
Sbjct: 315 VQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRL 374

Query: 454 EKSYDACALYGAALKQGV 471
               +A  +     K+GV
Sbjct: 375 GTVEEADDILKRMEKEGV 392


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 190/393 (48%), Gaps = 7/393 (1%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA-PNSWTFSIMIRCYCNKNDFFEARKV 142
           S+   N LL +++      T V   S   S G   P+  T SI I    +      A  V
Sbjct: 54  SIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSV 113

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           +  +   G+  +  T T L+  LC  GR  EAL + D     G   +   Y  L+ GLC 
Sbjct: 114 MAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCK 173

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           +G+  +A E+L  ++  G++P++  Y  V+DG CK G   EA  L +E + +G+  +V T
Sbjct: 174 MGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFT 233

Query: 263 FNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           +N+L +G+C  G     V LL +++ K +  PD  +++ L++ L K G +  A ++F  M
Sbjct: 234 YNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLM 293

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           ++ G E D    N+L+ G C++       + +A +VF++M ++  + +  +Y  +I    
Sbjct: 294 IKRGLEPDVVSCNALMNGWCLRGC-----MSEAKEVFDRMVERGKLPNVISYSTLINGYC 348

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K K  DEAL  L    +   +P T+T+N ++  L   G++     L+  M    + P   
Sbjct: 349 KVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLI 408

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           +Y++L+    + E    A AL+   +  G+ P 
Sbjct: 409 TYNVLLDDYLKRECLDKALALFQHIVDTGISPN 441



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 179/381 (46%), Gaps = 8/381 (2%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +   I K G          L+  L +      A+  +  A S G + +   +  +I   C
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLC 172

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 +A +++  M   G  PN+  + ++V+ LCK G + EA  +  +M   G   ++ 
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 192 TYNCLLKGLCYVGRVEEAYEML--MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           TYN L+ G C  G+ + A  +L  M +K D ++PDVYT+  ++D  CK+G   EA  +  
Sbjct: 233 TYNSLIHGFCGAGQFQGAVRLLNEMVMKED-VRPDVYTFNILVDALCKLGMVAEARNVFG 291

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             I+RG+ P+VV+ N L NG+C  G   +   +   M +R  LP+ ISYSTL+NG  K  
Sbjct: 292 LMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVK 351

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +  A+ +  EM +     D    N LL GL   S   + L E  + + E M       D
Sbjct: 352 MVDEALRLLTEMHQRNLVPDTVTYNCLLDGL---SKSGRVLYE--WDLVEAMRASGQAPD 406

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY +++    K +  D+AL    H ++ G  P   T+N +I  LC  G++  A  +  
Sbjct: 407 LITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQ 466

Query: 430 LMYEHAKIPSRTSYDMLITKL 450
           L+      P+  +Y+++I  L
Sbjct: 467 LLSVKGCRPNIRTYNIMINGL 487



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 195/389 (50%), Gaps = 8/389 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E ++++D     G ++    +  L+  L  + +   A++   +    G+ PN   +++++
Sbjct: 144 EALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVV 203

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGC 186
              C +    EA  +   M   G   +V T+  L++  C +G+ + A+ +L++M  +   
Sbjct: 204 DGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDV 263

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +P++ T+N L+  LC +G V EA  +   +   GL+PDV +  A+M+G+C  G  +EA E
Sbjct: 264 RPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKE 323

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           + +  +ERG  PNV++++TL NGYCK     + + LL  M +RN +PD ++Y+ LL+GL 
Sbjct: 324 VFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLS 383

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G++     + + M   G   D    N LL       + +++ L+ A  +F+ +     
Sbjct: 384 KSGRVLYEWDLVEAMRASGQAPDLITYNVLL-----DDYLKRECLDKALALFQHIVDTGI 438

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             +  TY I+I  L KG +   A          G  P   T+N +I  L  EG +D+A  
Sbjct: 439 SPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEA 498

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
           LL  M +    P+  ++D L+  L  LEK
Sbjct: 499 LLLEMVDDGFPPNAVTFDPLVRAL--LEK 525



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 183/355 (51%), Gaps = 6/355 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    ++ I++   ++K G   ++  +N ++  L        A    SE    G+  + +
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCM-FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           T++ +I  +C    F  A ++++ M       P+V TF ILV++LCK G + EA  V   
Sbjct: 233 TYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGL 292

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M + G +P++ + N L+ G C  G + EA E+   +   G  P+V +Y+ +++G+CKV  
Sbjct: 293 MIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKM 352

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            +EA+ LL E  +R + P+ VT+N L +G  K G  +    L++ M+     PD I+Y+ 
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           LL+  LK   +  A+++F+ +V  G   + R  N L+ GLC     +   ++ A ++F+ 
Sbjct: 413 LLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLC-----KGGRMKAAKEIFQL 467

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++ K    +  TY I+I  L +    DEA   L   ++ G  P  +TF+ +++AL
Sbjct: 468 LSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRAL 522



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 153/323 (47%), Gaps = 7/323 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC-KPNIQTYNCLLKGLCYVGRVEEAYE 211
           P++ +   L++S+ K+      + +   +   G  KP++ T +  +  L ++G++  A+ 
Sbjct: 53  PSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFS 112

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           ++  +   G   D +T T +M G C  GR+ EA+ L + A+ +G + + V + TL NG C
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLC 172

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           K G     + LL+ M+K    P+ I Y+ +++GL K G +  A  +  EMV  G  +D  
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV-TDPGTYGIVIRTLGKGKKTDEAL 390
             NSL+ G C          + A ++  +M  K  V  D  T+ I++  L K     EA 
Sbjct: 233 TYNSLIHGFCGAGQ-----FQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEAR 287

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
                 I+ G  P  ++ N ++   C  G + +A  +   M E  K+P+  SY  LI   
Sbjct: 288 NVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGY 347

Query: 451 DQLEKSYDACALYGAALKQGVIP 473
            +++   +A  L     ++ ++P
Sbjct: 348 CKVKMVDEALRLLTEMHQRNLVP 370



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 50/107 (46%)

Query: 59  DRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAP 118
           D +K   L + + +F  I   G + ++  +N L+  L      + A + F   S  G  P
Sbjct: 416 DYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRP 475

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           N  T++IMI     +    EA  ++  M D+G+ PN  TF  LV +L
Sbjct: 476 NIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRAL 522


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 192/413 (46%), Gaps = 5/413 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++   +KE    F  I + G   SV   N LL  L+ LN  +   + + E +  G+ PNS
Sbjct: 190 VREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNS 249

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +TF+I+   +C   D  +    ++ M + G+ P++ T+  L++  C+ GRL +A  +   
Sbjct: 250 YTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRI 309

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R    P++ +Y  L+ GLC  G+V EA+++   + + GL PD+ ++  ++ G+CK G+
Sbjct: 310 MYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGK 369

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             E+  LL+E I  G+ P+ VT   L  GY KE   +  + L+  +++         Y  
Sbjct: 370 MRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDY 429

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+  + + G+   A S+ + + + G+     + N L+  LC     + D + DA  V  +
Sbjct: 430 LMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLC-----KSDSIADALLVKSE 484

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M  +       TY  +I  L +  ++ EA   +   ++ G +P       ++   C E  
Sbjct: 485 MGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERD 544

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           I KA  LL    +  +I    SY+ L+    +   +     L    LK G  P
Sbjct: 545 IGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAP 597



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 179/400 (44%), Gaps = 56/400 (14%)

Query: 82  NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
           NW    F+ L+ A V     +     F +    G  P+      +I C C  N   +  +
Sbjct: 176 NWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPS------VISCNCLLNGLLKLNR 229

Query: 142 VIDC------MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
           +  C      M   G HPN  TF IL +  C+ G + +  + L++M   G +P+I TYN 
Sbjct: 230 IDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNT 289

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+   C  GR+++A+ +   +    + PD+ +YTA+M+G CK G+  EA +L +  I RG
Sbjct: 290 LISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRG 349

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           + P++V+FNTL  GYCKEG   +   LL  M      PDK++   L+ G  K  +I  A+
Sbjct: 350 LNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSAL 409

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           ++  E+ RFG  +   + + L+  +C   + +  K LL+   Q                 
Sbjct: 410 NLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQ----------------- 452

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
                                     G++P    +N +I++LC    I  ALL+   M  
Sbjct: 453 -------------------------RGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGH 487

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               PS  +Y  LI  L +  +S +A +L    L+ G++P
Sbjct: 488 RNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLP 527



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 125/290 (43%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E   +F  +   G N  +  FN L+       +   +     E    G+ P+  
Sbjct: 331 KEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKV 390

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T  ++I  Y  +     A  ++  +   G   +   +  L+ S+C+ GR   A  +L ++
Sbjct: 391 TCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRI 450

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G  P ++ YN L++ LC    + +A  +   + +  +KP   TY A++   C+  RS
Sbjct: 451 SQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRS 510

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  L+ E ++ G+ P+      L + YCKE    K   LL+   K   + D  SY+TL
Sbjct: 511 MEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTL 570

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
           +    +       + +   M++ GF  + +    ++ GL      EKD L
Sbjct: 571 VKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWKAMAVEKDKL 620



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 114/280 (40%), Gaps = 25/280 (8%)

Query: 216 VKND-GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE-------------------RG 255
           VKND GL+P +  Y  ++          EAM+ L E I+                   + 
Sbjct: 115 VKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQD 174

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
              + V F+ L   Y +EG   +G    + + +  C+P  IS + LLNGLLK  +I    
Sbjct: 175 CNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCW 234

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            ++KEM R G   +    N L    C     + D + D     E+M ++    D  TY  
Sbjct: 235 QVYKEMARVGIHPNSYTFNILTHVFCQDG--DVDKVND---FLERMEEEGFEPDIVTYNT 289

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I    +  + D+A            +P  +++  ++  LC EGK+ +A  L   M    
Sbjct: 290 LISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRG 349

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
             P   S++ LI    +  K  ++ +L    +  G+ P +
Sbjct: 350 LNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDK 389


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 5/312 (1%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           APN +TF+I+I   C + +  EAR +   M + G  P+V TF  L++   K G L E  +
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           ++++M R GCK ++ TYN L+   C  GR+E AY     +K +G+  +V T++  +D FC
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
           K G   EAM+L  +   RG+  N  T+  L +G CK G     + LL  M ++    + +
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y+ L++GL K  K+  A  + + M + G   +E +  +L+ G  M    EK     A  
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK-----ALG 419

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +  +M  K    D   YG +I+ L    K DEA   L    E G  P  I +  ++ A  
Sbjct: 420 LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACF 479

Query: 417 GEGKIDKALLLL 428
             GK+ +A+ +L
Sbjct: 480 KSGKVPEAIAML 491



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 179/373 (47%), Gaps = 11/373 (2%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFS-IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           + AV+  +      + PN+ T + I++R   +++      +++  +F+    PNV TF I
Sbjct: 139 DDAVRAVARVRELRVPPNTRTCNHILLRLARDRSG-----RLVRRLFEQLPAPNVFTFNI 193

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           +++ LCK G L EA  +  +M  +GC P++ T+N L+ G    G ++E  +++  ++  G
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
            K DV TY A+++ FCK GR   A          GV  NVVTF+T  + +CKEG   + +
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            L   M+ R    ++ +Y+ L++G  K G++  A+ +  EMVR G  ++      L+ GL
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C    +E+ + E A  V   M K     +   Y  +I      K +++AL  L      G
Sbjct: 374 C----KERKVAE-AEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
                  +  +IQ LC   K+D+A  LL  M E    P+   Y  ++    +  K  +A 
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 461 ALYGAALKQGVIP 473
           A+    L  G  P
Sbjct: 489 AMLQKILDSGFQP 501



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 174/394 (44%), Gaps = 18/394 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E   + + +++ G    V  +N L+         ETA  +F+     G+  N  
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVV 294

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TFS  +  +C +    EA K+   M   G   N  T+T L++  CK+GRL +A+ +LD+M
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G   N+ TY  L+ GLC   +V EA ++L  ++  G++ +   YT ++ G      S
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ LL+E   +G+  ++  +  L  G C      +   LL  M +    P+ I Y+T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++   K GK+  A+++ ++++  GF+ +   +N                  +A Q+F +M
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNNGCLN------------------EAVQLFNEM 516

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K    D   Y  ++    K     +A       I+ G       +   I   C    +
Sbjct: 517 VHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMM 576

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
            +A  +   M  H   P R  Y+ LIT++ ++ +
Sbjct: 577 PEAREVFSEMIGHGIAPDRAVYNCLITQIPEIRE 610


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 184/379 (48%), Gaps = 12/379 (3%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D++  IK    +     ++ ++  L    + E AV F   +    + P+  +F+ ++  Y
Sbjct: 177 DVYKEIKDKNEH----TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGY 232

Query: 131 CNKNDFFEARKVIDC-MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           C K  F +  K   C +   G  P+V +  IL+N LC  G + EALE+   M + G +P+
Sbjct: 233 C-KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 291

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L KG   +G +  A+E++ ++ + GL PDV TYT ++ G C++G  +  + LL 
Sbjct: 292 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 351

Query: 250 EAIERGVTPN-VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           + + RG   N ++  + + +G CK G   + + L   MK     PD ++YS +++GL K 
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           GK   A+ ++ EM       + R   +LL GLC     +K +L +A  + + +       
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLC-----QKGMLLEARSLLDSLISSGETL 466

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D   Y IVI    K    +EAL      IE G  P   TFN++I   C    I +A  +L
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526

Query: 429 FLMYEHAKIPSRTSYDMLI 447
            ++  +   PS  SY  L+
Sbjct: 527 DVIKLYGLAPSVVSYTTLM 545



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 171/377 (45%), Gaps = 10/377 (2%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT-FSIMIRCYCNKNDFFE 138
           G +  V  +  LL     L   +  +    +  S G   NS    S+M+   C      E
Sbjct: 322 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 381

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A  + + M  +G  P++  ++I+++ LCK G+   AL + D+M      PN +T+  LL 
Sbjct: 382 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC  G + EA  +L ++ + G   D+  Y  V+DG+ K G   EA+EL    IE G+TP
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           +V TFN+L  GYCK     +   +L ++K     P  +SY+TL++     G  +    + 
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKD--------LLEDAYQVFEKMTKKVSVTDP 370
           +EM   G        + + +GLC + W+ ++        + E   Q    M  +    D 
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 620

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I+ L + K    A + L           + T+N +I +LC  G I KA   ++ 
Sbjct: 621 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYS 680

Query: 431 MYEHAKIPSRTSYDMLI 447
           + E     S+ +Y  LI
Sbjct: 681 LQEQNVSLSKFAYTTLI 697



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 194/437 (44%), Gaps = 51/437 (11%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           FVD  K+         F ++ K G   SV   N L+  L ++     A++  S+ + +G+
Sbjct: 237 FVDMAKS--------FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV 288

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P+S T++I+ + +        A +VI  M D G  P+V T+TIL+   C+ G +   L 
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348

Query: 177 VLDQMGRIGCKPN-IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           +L  M   G + N I   + +L GLC  GR++EA  +   +K DGL PD+  Y+ V+ G 
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK+G+ + A+ L +E  ++ + PN  T   L  G C++G  ++   LL  +       D 
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS--WEEKDLLE- 352
           + Y+ +++G  K G I  A+ +FK ++  G        NSL+ G C      E + +L+ 
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 528

Query: 353 -----------------DAY----------QVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                            DAY          ++  +M  +       TY ++ + L +G K
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588

Query: 386 TDEALIHLHHAI------------EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
            +     L   I              G  P  IT+N +IQ LC    +  A + L +M  
Sbjct: 589 HENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKS 648

Query: 434 HAKIPSRTSYDMLITKL 450
                S  +Y++LI  L
Sbjct: 649 RNLDASSATYNILIDSL 665



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 165/367 (44%), Gaps = 17/367 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F+ +K DG +  +  ++ ++  L  L + + A+  + E     + PNS 
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T   ++   C K    EAR ++D +  +G   ++  + I+++   KSG ++EALE+   +
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ T+N L+ G C    + EA ++L  +K  GL P V +YT +MD +   G +
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYC------------KEGTPMKGVGLLKLMKKR 289
               EL  E    G+ P  VT++ +F G C            +E    K    L+ M+  
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD+I+Y+T++  L +   +  A    + M     +      N L+  LC+  +  K 
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK- 673

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
              D++ ++    + VS++    Y  +I+        + A+   H  +  G       ++
Sbjct: 674 --ADSF-IYSLQEQNVSLSKFA-YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729

Query: 410 NVIQALC 416
            VI  LC
Sbjct: 730 AVINRLC 736



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 41/318 (12%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N  T++ +V+ LC+  +L++A+  L         P++ ++N ++ G C +G V+ A    
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             V   GL P VY++  +++G C VG   EA+EL ++  + GV P+ VT+N L  G+   
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G       +++ M  +   PD I+Y+ LL G  + G I   + + K+M+  GFE++  + 
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365

Query: 334 NS-LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            S +L GLC                                        K  + DEAL  
Sbjct: 366 CSVMLSGLC----------------------------------------KTGRIDEALSL 385

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            +     G  P  + ++ VI  LC  GK D AL L   M +   +P+  ++  L+  L Q
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 445

Query: 453 LEKSYDACALYGAALKQG 470
                +A +L  + +  G
Sbjct: 446 KGMLLEARSLLDSLISSG 463



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 133/290 (45%), Gaps = 12/290 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   + DS+   G    +  +N ++         E A++ F      G+ P+  TF+ 
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 508

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC   +  EARK++D +   G  P+V ++T L+++    G  K   E+  +M   G
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 568

Query: 186 CKPNIQTYNCLLKGLC---------YVGR---VEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
             P   TY+ + KGLC         +V R    E+  + L +++++G+ PD  TY  ++ 
Sbjct: 569 IPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 628

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             C+V   + A   L     R +  +  T+N L +  C  G   K    +  ++++N   
Sbjct: 629 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSL 688

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            K +Y+TL+      G    AV +F +++  GF V  R  ++++  LC +
Sbjct: 689 SKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 92/394 (23%), Positives = 175/394 (44%), Gaps = 19/394 (4%)

Query: 92  LMALVMLNEQETAVKFFSEASS-YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF--D 148
           +M  +M    + +V FF E    Y    +S++  ++      +  F E + +++ +   +
Sbjct: 55  IMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEE 114

Query: 149 NGYHPNVTTFTILVNSLCKSGRLK---EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
             +    +T  +    L  S RL+   ++L +L +M       + Q+YN +L       +
Sbjct: 115 GTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDK 174

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           + + Y+ + + KN+      +TY+ V+DG C+  +  +A+  L  +  + + P+VV+FN+
Sbjct: 175 MWDVYKEIKD-KNE------HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNS 227

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + +GYCK G           + K   +P   S++ L+NGL   G I  A+ +  +M + G
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            E D    N L +G  +       ++  A++V   M  K    D  TY I++    +   
Sbjct: 288 VEPDSVTYNILAKGFHLLG-----MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342

Query: 386 TDEALIHLHHAIEMG-HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
            D  L+ L   +  G  +   I  + ++  LC  G+ID+AL L   M      P   +Y 
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQRKPQ 478
           ++I  L +L K   A  LY     + ++P  +  
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 184/379 (48%), Gaps = 12/379 (3%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D++  IK    +     ++ ++  L    + E AV F   +    + P+  +F+ ++  Y
Sbjct: 177 DVYKEIKDKNEH----TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGY 232

Query: 131 CNKNDFFEARKVIDC-MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           C K  F +  K   C +   G  P+V +  IL+N LC  G + EALE+   M + G +P+
Sbjct: 233 C-KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 291

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN L KG   +G +  A+E++ ++ + GL PDV TYT ++ G C++G  +  + LL 
Sbjct: 292 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 351

Query: 250 EAIERGVTPN-VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           + + RG   N ++  + + +G CK G   + + L   MK     PD ++YS +++GL K 
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           GK   A+ ++ EM       + R   +LL GLC     +K +L +A  + + +       
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLC-----QKGMLLEARSLLDSLISSGETL 466

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D   Y IVI    K    +EAL      IE G  P   TFN++I   C    I +A  +L
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526

Query: 429 FLMYEHAKIPSRTSYDMLI 447
            ++  +   PS  SY  L+
Sbjct: 527 DVIKLYGLAPSVVSYTTLM 545



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 171/377 (45%), Gaps = 10/377 (2%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT-FSIMIRCYCNKNDFFE 138
           G +  V  +  LL     L   +  +    +  S G   NS    S+M+   C      E
Sbjct: 322 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 381

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A  + + M  +G  P++  ++I+++ LCK G+   AL + D+M      PN +T+  LL 
Sbjct: 382 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
           GLC  G + EA  +L ++ + G   D+  Y  V+DG+ K G   EA+EL    IE G+TP
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           +V TFN+L  GYCK     +   +L ++K     P  +SY+TL++     G  +    + 
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKD--------LLEDAYQVFEKMTKKVSVTDP 370
           +EM   G        + + +GLC + W+ ++        + E   Q    M  +    D 
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 620

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  +I+ L + K    A + L           + T+N +I +LC  G I KA   ++ 
Sbjct: 621 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYS 680

Query: 431 MYEHAKIPSRTSYDMLI 447
           + E     S+ +Y  LI
Sbjct: 681 LQEQNVSLSKFAYTTLI 697



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 194/437 (44%), Gaps = 51/437 (11%)

Query: 57  FVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGL 116
           FVD  K+         F ++ K G   SV   N L+  L ++     A++  S+ + +G+
Sbjct: 237 FVDMAKS--------FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV 288

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
            P+S T++I+ + +        A +VI  M D G  P+V T+TIL+   C+ G +   L 
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348

Query: 177 VLDQMGRIGCKPN-IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
           +L  M   G + N I   + +L GLC  GR++EA  +   +K DGL PD+  Y+ V+ G 
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           CK+G+ + A+ L +E  ++ + PN  T   L  G C++G  ++   LL  +       D 
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS--WEEKDLLE- 352
           + Y+ +++G  K G I  A+ +FK ++  G        NSL+ G C      E + +L+ 
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 528

Query: 353 -----------------DAY----------QVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                            DAY          ++  +M  +       TY ++ + L +G K
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588

Query: 386 TDEALIHLHHAI------------EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
            +     L   I              G  P  IT+N +IQ LC    +  A + L +M  
Sbjct: 589 HENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKS 648

Query: 434 HAKIPSRTSYDMLITKL 450
                S  +Y++LI  L
Sbjct: 649 RNLDASSATYNILIDSL 665



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 165/367 (44%), Gaps = 17/367 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F+ +K DG +  +  ++ ++  L  L + + A+  + E     + PNS 
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T   ++   C K    EAR ++D +  +G   ++  + I+++   KSG ++EALE+   +
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P++ T+N L+ G C    + EA ++L  +K  GL P V +YT +MD +   G +
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYC------------KEGTPMKGVGLLKLMKKR 289
               EL  E    G+ P  VT++ +F G C            +E    K    L+ M+  
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              PD+I+Y+T++  L +   +  A    + M     +      N L+  LC+  +  K 
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK- 673

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
              D++ ++    + VS++    Y  +I+        + A+   H  +  G       ++
Sbjct: 674 --ADSF-IYSLQEQNVSLSKFA-YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729

Query: 410 NVIQALC 416
            VI  LC
Sbjct: 730 AVINRLC 736



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 41/318 (12%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N  T++ +V+ LC+  +L++A+  L         P++ ++N ++ G C +G V+ A    
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             V   GL P VY++  +++G C VG   EA+EL ++  + GV P+ VT+N L  G+   
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G       +++ M  +   PD I+Y+ LL G  + G I   + + K+M+  GFE++  + 
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365

Query: 334 NS-LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            S +L GLC                                        K  + DEAL  
Sbjct: 366 CSVMLSGLC----------------------------------------KTGRIDEALSL 385

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            +     G  P  + ++ VI  LC  GK D AL L   M +   +P+  ++  L+  L Q
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 445

Query: 453 LEKSYDACALYGAALKQG 470
                +A +L  + +  G
Sbjct: 446 KGMLLEARSLLDSLISSG 463



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 133/290 (45%), Gaps = 12/290 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E   + DS+   G    +  +N ++         E A++ F      G+ P+  TF+ 
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 508

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  YC   +  EARK++D +   G  P+V ++T L+++    G  K   E+  +M   G
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 568

Query: 186 CKPNIQTYNCLLKGLC---------YVGR---VEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
             P   TY+ + KGLC         +V R    E+  + L +++++G+ PD  TY  ++ 
Sbjct: 569 IPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 628

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             C+V   + A   L     R +  +  T+N L +  C  G   K    +  ++++N   
Sbjct: 629 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSL 688

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            K +Y+TL+      G    AV +F +++  GF V  R  ++++  LC +
Sbjct: 689 SKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 92/394 (23%), Positives = 175/394 (44%), Gaps = 19/394 (4%)

Query: 92  LMALVMLNEQETAVKFFSEASS-YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF--D 148
           +M  +M    + +V FF E    Y    +S++  ++      +  F E + +++ +   +
Sbjct: 55  IMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEE 114

Query: 149 NGYHPNVTTFTILVNSLCKSGRLK---EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
             +    +T  +    L  S RL+   ++L +L +M       + Q+YN +L       +
Sbjct: 115 GTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDK 174

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           + + Y+ + + KN+      +TY+ V+DG C+  +  +A+  L  +  + + P+VV+FN+
Sbjct: 175 MWDVYKEIKD-KNE------HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNS 227

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + +GYCK G           + K   +P   S++ L+NGL   G I  A+ +  +M + G
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            E D    N L +G  +       ++  A++V   M  K    D  TY I++    +   
Sbjct: 288 VEPDSVTYNILAKGFHLLG-----MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342

Query: 386 TDEALIHLHHAIEMG-HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
            D  L+ L   +  G  +   I  + ++  LC  G+ID+AL L   M      P   +Y 
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402

Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQRKPQ 478
           ++I  L +L K   A  LY     + ++P  +  
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436


>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Glycine max]
          Length = 492

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 215/455 (47%), Gaps = 40/455 (8%)

Query: 30  VVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFN 89
           V  A AS +T   L L+ +PR+L                     +++ K   +W+    N
Sbjct: 31  VNIAEASDATIAKLVLESDPRTLS--------------------EALTKPRIHWTPELVN 70

Query: 90  DLLMALVMLNEQETAVKFFSEAS----SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
             L  L   N    A+ FF        SY  +P+S+  ++ I       DF  A  ++  
Sbjct: 71  KTLKRL--WNHGPKALLFFKHLDRHLPSYTHSPSSFDHAVDI--AARMRDFNSAWALVGR 126

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M      P+  T  IL       G+   A+     M   G   ++ ++N LL  LC   R
Sbjct: 127 MRSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNR 186

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           VE A+++L  +K+   +PD  +Y  + +G+C   R+  A+ +L E ++RG+ P +VT+NT
Sbjct: 187 VETAHDLLRTLKSR-FRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNT 245

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           +  GY +     +       MKKR C  D +SY+T+++G  + G+++ A  +F EMV+ G
Sbjct: 246 MLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEG 305

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKG 383
              +    N+L++  C     +KD +++A  VFE+M ++  V  P   T+ +VIR L   
Sbjct: 306 VAPNVATYNALIQVFC-----KKDSVQNAVAVFEEMVRE-GVCSPNVVTFNVVIRGLCHV 359

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
              + AL  +    E G      T+N VI+  C  G+I+K L +   M +   +P+  +Y
Sbjct: 360 GDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTY 419

Query: 444 DMLITKLDQLEKSYD---ACALYGAALKQGVIPQR 475
           ++LI+ +   +KS D   A  L    +++G +P++
Sbjct: 420 NVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRK 454



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 162/331 (48%), Gaps = 10/331 (3%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           + +   AV+ F     +GL  +  +F+ ++   C  N    A  ++  +  + + P+  +
Sbjct: 149 IGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTL-KSRFRPDTVS 207

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           + IL N  C   R   AL VL +M + G +P + TYN +LKG     +++EA+E  + +K
Sbjct: 208 YNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMK 267

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
               + DV +YT V+ GF + G   +A  + +E ++ GV PNV T+N L   +CK+ +  
Sbjct: 268 KRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQ 327

Query: 278 KGVGLLKLMKKRN-CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
             V + + M +   C P+ ++++ ++ GL   G +  A+   + M   G     +  N +
Sbjct: 328 NAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVV 387

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH---L 393
           +R  C     EK L     +VF KM   + + +  TY ++I  +   KK+++ ++    L
Sbjct: 388 IRYFCDAGEIEKGL-----EVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLL 442

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
              +E G +PR  TFN V+  L   G  D A
Sbjct: 443 MEMVERGFLPRKFTFNRVLNGLVITGNQDFA 473



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 131/268 (48%), Gaps = 6/268 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K +P+  R+     + + G   ++  +N +L      N+ + A +F+ E        +  
Sbjct: 219 KRTPMALRV--LKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVV 276

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++ +I  +    +  +A++V D M   G  PNV T+  L+   CK   ++ A+ V ++M
Sbjct: 277 SYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEM 336

Query: 182 GRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            R G C PN+ T+N +++GLC+VG +E A   +  +   GL+  V TY  V+  FC  G 
Sbjct: 337 VREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGE 396

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYC--KEGTPMKGVG-LLKLMKKRNCLPDKIS 297
             + +E+  +  +    PN+ T+N L +     K+   +   G LL  M +R  LP K +
Sbjct: 397 IEKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFT 456

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           ++ +LNGL+  G    A  I +   R G
Sbjct: 457 FNRVLNGLVITGNQDFAKDILRMQSRCG 484


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 205/470 (43%), Gaps = 70/470 (14%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN---------- 119
           + ++D+++K G + +V  +N L+ AL   +  + A K   E S  G  P+          
Sbjct: 142 VPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSG 201

Query: 120 --------------------SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
                                 +++ ++   C +   +E   V++ M   G  PNV T+T
Sbjct: 202 MCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYT 261

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT--------------------------- 192
            +V++ CK+  L+ A  +L +M  +GC PN+ T                           
Sbjct: 262 TIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE 321

Query: 193 --------YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
                   YN L++GLC +G ++ A +   ++K + L P+  TY+ ++DGF   G  + A
Sbjct: 322 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 381

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           M + NE    G  PNVV +  + +  CK+    +   L+  M   NC P+ ++++TL+  
Sbjct: 382 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGR 441

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L   G++  A+++F  M R G   ++R  N LL GL    + E +  +DA+ +  +M   
Sbjct: 442 LCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGL----FREGN-HKDAFAMVIEMLNN 496

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
                  TY  VI  L +      A++ L   +  G  P   TFN +I A C EGK+  A
Sbjct: 497 GFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIA 556

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             LL  M       +  +Y +LI++L    K  +A       L +G+ P 
Sbjct: 557 ACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPN 606



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 175/384 (45%), Gaps = 11/384 (2%)

Query: 94  ALVMLNEQETAVKFFSEASSYGLA-PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
           A       + A+K F  AS  G   P    ++ ++     +N       V D M   G  
Sbjct: 95  AFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVD 154

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           PNV T+ +L+ +LC++ R+  A ++LD+M R GC P+  ++  ++ G+C +GRVEEA   
Sbjct: 155 PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGF 214

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L         P   +Y AV+   C   R  E   ++NE ++RG+ PNVVT+ T+ + +CK
Sbjct: 215 LAET-----VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCK 269

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                    +L  M    C P+ ++++ L+ G  + GK+  A+S++  MV  G+      
Sbjct: 270 ARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTIS 329

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+RGLC         L+ A   F  M +   + +  TY  ++         D A++ 
Sbjct: 330 YNVLIRGLCCIG-----DLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLI 384

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            +     G  P  + + N+I  LC +   D+A  L+  M      P+  +++ LI +L  
Sbjct: 385 WNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCD 444

Query: 453 LEKSYDACALYGAALKQGVIPQRK 476
             +   A  ++    + G  P  +
Sbjct: 445 CGRVGRALNVFHGMRRNGCHPNDR 468



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 178/387 (45%), Gaps = 10/387 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
            V  +N LL AL+  N     V  +      G+ PN +T++++IR  C  +    ARK++
Sbjct: 121 GVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKML 180

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M   G HP+  +   +V+ +CK GR++EA   L +       P   +YN ++  LC  
Sbjct: 181 DEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQASYNAVVHALCGE 235

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            R+ E + ++  +   GL+P+V TYT ++D FCK      A  +L   +  G TPNV+TF
Sbjct: 236 FRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 295

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             L  G+ ++G     + +   M      P  ISY+ L+ GL   G ++ A+  F  M R
Sbjct: 296 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKR 355

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                +    ++L+ G     +     L+ A  ++ +M       +   Y  +I  L K 
Sbjct: 356 NALLPNATTYSTLVDG-----FSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKK 410

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
              D+A   +   +     P T+TFN +I  LC  G++ +AL +   M  +   P+  +Y
Sbjct: 411 MMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTY 470

Query: 444 DMLITKLDQLEKSYDACALYGAALKQG 470
           + L+  L +     DA A+    L  G
Sbjct: 471 NELLHGLFREGNHKDAFAMVIEMLNNG 497



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 142/275 (51%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK  +D F+S+K++    + + ++ L+       + + A+  ++E  S G  PN   ++ 
Sbjct: 343 LKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTN 402

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI   C K  F +A  +ID M  +   PN  TF  L+  LC  GR+  AL V   M R G
Sbjct: 403 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 462

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN +TYN LL GL   G  ++A+ M++ + N+G +  + TY  V++  C++     AM
Sbjct: 463 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM 522

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL   + +G+ P+  TFN + + YCKEG       LL  M   NC  + ++Y+ L++ L
Sbjct: 523 LLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISEL 582

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
              GK+  A+    +M+  G   +E   N L+R +
Sbjct: 583 CNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 617



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 174/383 (45%), Gaps = 5/383 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   + + + + G   +V  +  ++ A     E   A    +   S G  PN  TF+ ++
Sbjct: 240 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 299

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           + +       +A  +   M D G+ P+  ++ +L+  LC  G LK AL+  + M R    
Sbjct: 300 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALL 359

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  TY+ L+ G    G ++ A  +   +K+ G KP+V  YT ++D  CK    ++A  L
Sbjct: 360 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESL 419

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           +++ +     PN VTFNTL    C  G   + + +   M++  C P+  +Y+ LL+GL +
Sbjct: 420 IDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFR 479

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G  + A ++  EM+  GFE+     N+++  LC     +  +L     +  +M  +   
Sbjct: 480 EGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAML-----LLGRMMVQGIQ 534

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  T+  +I    K  K   A   L     +      + +  +I  LC +GK+  A++ 
Sbjct: 535 PDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVY 594

Query: 428 LFLMYEHAKIPSRTSYDMLITKL 450
           L  M      P+  ++++L+  +
Sbjct: 595 LLKMLYEGICPNEATWNVLVRAI 617



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 152/354 (42%), Gaps = 5/354 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+    I   +   G   +V  F  L+       +   A+  +      G AP++ 
Sbjct: 269 KARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTI 328

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++++IR  C   D   A    + M  N   PN TT++ LV+    +G L  A+ + ++M
Sbjct: 329 SYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM 388

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GCKPN+  Y  ++  LC     ++A  ++  +  D   P+  T+  ++   C  GR 
Sbjct: 389 KSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRV 448

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+ + +     G  PN  T+N L +G  +EG       ++  M         ++Y+T+
Sbjct: 449 GRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTV 508

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +N L +    + A+ +   M+  G + D    N+++   C     ++  +  A  +  +M
Sbjct: 509 INCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYC-----KEGKVSIAACLLGQM 563

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
                  +   Y I+I  L    K   A+++L   +  G  P   T+N +++A+
Sbjct: 564 NAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 617


>gi|414586026|tpg|DAA36597.1| TPA: hypothetical protein ZEAMMB73_327514 [Zea mays]
          Length = 549

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCY-CNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
            A+   +  ++ G+ P++   ++++  Y C  + F  A +V+  M  NG   +V T++ L
Sbjct: 116 AALAVLNAMATDGVMPDAAACTVLVGVYACRLHWFDAAYEVVRWMTANGVALDVVTYSTL 175

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++ LC +GR+ EAL VLD M   GC+PN  TY  +L   C  G + EA E+L  +   G 
Sbjct: 176 ISGLCSAGRVAEALGVLDLMLEEGCQPNAHTYTPILHAYCTSGMIHEAKELLETMIAAGF 235

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P   TY  +++  CK    NE   LL E+  +G TP+ +T++T  +G CK+G   K   
Sbjct: 236 APSTATYNVLVEALCKACAFNEVDALLEESSAKGWTPDTITYSTYMDGLCKDGRVHKSFA 295

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L+  M      P++I+ + LL+G+ +      A  + +     G+ V+    N+++R LC
Sbjct: 296 LVDKMLSVGLRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYNTVMRRLC 355

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
               +E+  L    ++F  + KK    +  T  IVI +L K  +  EAL  +        
Sbjct: 356 ----DERRWL-SVVKLFVDIVKKGIAPNSWTLSIVIHSLCKLGRLHEALCLIG---SEEF 407

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +   +T+N +I+ L   GK  +A LLL  M E    P+ T+Y +LI
Sbjct: 408 VADVVTYNTLIRYLNFLGKAYEAYLLLHHMIEKGIAPNDTTYSLLI 453



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 157/364 (43%), Gaps = 50/364 (13%)

Query: 69  RIDIFDS-------IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           R+  FD+       +  +G    V  ++ L+  L        A+         G  PN+ 
Sbjct: 146 RLHWFDAAYEVVRWMTANGVALDVVTYSTLISGLCSAGRVAEALGVLDLMLEEGCQPNAH 205

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  YC      EA+++++ M   G+ P+  T+ +LV +LCK+    E   +L++ 
Sbjct: 206 TYTPILHAYCTSGMIHEAKELLETMIAAGFAPSTATYNVLVEALCKACAFNEVDALLEES 265

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TY+  + GLC  GRV +++ ++  + + GL+P+  T   ++DG C+   +
Sbjct: 266 SAKGWTPDTITYSTYMDGLCKDGRVHKSFALVDKMLSVGLRPNEITLNILLDGVCRRSTA 325

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A  LL  + E G   NVV +NT+    C E   +  V L   + K+   P+  + S +
Sbjct: 326 WAAKCLLECSAEIGWHVNVVNYNTVMRRLCDERRWLSVVKLFVDIVKKGIAPNSWTLSIV 385

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K G++  A                         LC+   EE              
Sbjct: 386 IHSLCKLGRLHEA-------------------------LCLIGSEE-------------- 406

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                V D  TY  +IR L    K  EA + LHH IE G  P   T++ +I  LC EGK 
Sbjct: 407 ----FVADVVTYNTLIRYLNFLGKAYEAYLLLHHMIEKGIAPNDTTYSLLIDCLCKEGKF 462

Query: 422 DKAL 425
             AL
Sbjct: 463 LVAL 466



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 126/254 (49%), Gaps = 11/254 (4%)

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
           S GL PN  T +I++   C ++  + A+ +++C  + G+H NV  +  ++  LC   R  
Sbjct: 302 SVGLRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYNTVMRRLCDERRWL 361

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
             +++   + + G  PN  T + ++  LC +GR+ EA   L  + ++    DV TY  ++
Sbjct: 362 SVVKLFVDIVKKGIAPNSWTLSIVIHSLCKLGRLHEA---LCLIGSEEFVADVVTYNTLI 418

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
                +G++ EA  LL+  IE+G+ PN  T++ L +  CKEG  +  +G L       C+
Sbjct: 419 RYLNFLGKAYEAYLLLHHMIEKGIAPNDTTYSLLIDCLCKEGKFLVALGCLN-----RCM 473

Query: 293 PDKIS---YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              +S    S++L GL+  GK+R   ++   ++  GF +D  +   L+   C K +    
Sbjct: 474 EGGLSKAVVSSILRGLIAGGKLRELQALIGWILGQGFVLDVYIYQELIISFCKKGYCRGL 533

Query: 350 LLEDAYQVFEKMTK 363
            +     + E+M +
Sbjct: 534 EMYIVCHILERMIR 547



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/328 (22%), Positives = 137/328 (41%), Gaps = 23/328 (7%)

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +G+HP                  + AL +LD+M   +G +P+   +           +  
Sbjct: 70  DGHHPGAGA--------------ERALHLLDEMRSLMGRRPDAACFTTAAAAFSSASQPG 115

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGF-CKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            A  +L  +  DG+ PD    T ++  + C++   + A E++      GV  +VVT++TL
Sbjct: 116 AALAVLNAMATDGVMPDAAACTVLVGVYACRLHWFDAAYEVVRWMTANGVALDVVTYSTL 175

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +G C  G   + +G+L LM +  C P+  +Y+ +L+     G I  A  + + M+  GF
Sbjct: 176 ISGLCSAGRVAEALGVLDLMLEEGCQPNAHTYTPILHAYCTSGMIHEAKELLETMIAAGF 235

Query: 327 EVDERMMNSLLRGLCMK-SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                  N L+  LC   ++ E D L       E+ + K    D  TY   +  L K  +
Sbjct: 236 APSTATYNVLVEALCKACAFNEVDAL------LEESSAKGWTPDTITYSTYMDGLCKDGR 289

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             ++   +   + +G  P  IT N ++  +C       A  LL    E     +  +Y+ 
Sbjct: 290 VHKSFALVDKMLSVGLRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYNT 349

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           ++ +L    +      L+   +K+G+ P
Sbjct: 350 VMRRLCDERRWLSVVKLFVDIVKKGIAP 377


>gi|115445813|ref|NP_001046686.1| Os02g0321000 [Oryza sativa Japonica Group]
 gi|113536217|dbj|BAF08600.1| Os02g0321000 [Oryza sativa Japonica Group]
          Length = 542

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 195/426 (45%), Gaps = 17/426 (3%)

Query: 29  LVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSD 87
           + VFA    + A+  D    P  L     V+ + +A    E +  FD +   G   + S 
Sbjct: 76  VAVFAELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASS 135

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            N L+      +E + A +   ++   G+ P+  T+S +I   C      EA  V+D M 
Sbjct: 136 QNILIKMHARRSEFDLAWELIHKS---GVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWML 192

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +    P V T+T +V + C+ GR+ EA  ++ +M R+GC PN+ TYN L++ LC   + +
Sbjct: 193 EKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFD 252

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           E  ++LM       KP   TY   M+G CK G++ EA+ELL+  +  G+ P   T++ L 
Sbjct: 253 EVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILL 312

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           N  C     +  + LL+   +       ++Y+T+++ L + GK R  + +  +M++ G E
Sbjct: 313 NCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIE 372

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            + R  N L+R LC+     K  L  A  +   +    +V    TY I++       K  
Sbjct: 373 PNTRTFNILIRSLCVGG---KSSL--AKSLIHSLGFAANVV---TYNILLHWFYYHGKLT 424

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA   +    E    P  +T+  +I  LC E K D A            + S  S D+L 
Sbjct: 425 EANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACFL-----KSLTSGLSMDVLT 479

Query: 448 TKLDQL 453
             L++L
Sbjct: 480 VLLNRL 485



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 204/419 (48%), Gaps = 24/419 (5%)

Query: 63  ASPLKERIDIFDSIKKD-------GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           A  L E + +F  +K+        G   +V  +N L+ AL     +  A+K F E  + G
Sbjct: 69  AGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASG 128

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           +APN+ + +I+I+ +  +++F  A ++I     +G  P+V T++ L+  LC++G++ EA 
Sbjct: 129 VAPNASSQNILIKMHARRSEFDLAWELI---HKSGVEPDVGTYSTLIAGLCRAGKIVEAW 185

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            VLD M    C+P +QTY  +++  C  GR+ EA  ++  ++  G  P+V TY  ++   
Sbjct: 186 GVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRAL 245

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           C   + +E  ++L E+  +   P+ VT+N   NG CK+G   + + LL +M      P  
Sbjct: 246 CDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTA 305

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDA 354
            ++S LLN L    ++  A+ + +      +       N+++  LC M  W         
Sbjct: 306 YTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWR------GI 359

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD--EALIHLHHAIEMGHIPRTITFNNVI 412
            ++   M KK    +  T+ I+IR+L  G K+   ++LIH      +G     +T+N ++
Sbjct: 360 MKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIH-----SLGFAANVVTYNILL 414

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
                 GK+ +A  L+ +M E    P   +Y ++I  L +  K   A A +  +L  G+
Sbjct: 415 HWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACFLKSLTSGL 473



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 147/326 (45%), Gaps = 15/326 (4%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRI-------GCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + + + +L  +G L E + V  ++ R        G  PN+  YN L+  L   GR  EA 
Sbjct: 59  YNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEAL 118

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           +    +   G+ P+  +   ++    +    + A EL++++   GV P+V T++TL  G 
Sbjct: 119 KAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIHKS---GVEPDVGTYSTLIAGL 175

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+ G  ++  G+L  M ++NC P   +Y+ ++    + G+I  A  +  EM R G   + 
Sbjct: 176 CRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNV 235

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N L+R LC     + D  ++  QV  + + K       TY I +  L K  K  EAL
Sbjct: 236 VTYNVLIRALC-----DDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEAL 290

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             L   +  G  P   T++ ++  LC   ++  A+ LL    E        +Y+ +++ L
Sbjct: 291 ELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSL 350

Query: 451 DQLEKSYDACALYGAALKQGVIPQRK 476
            ++ K      L    +K+G+ P  +
Sbjct: 351 CEMGKWRGIMKLLTDMIKKGIEPNTR 376


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 200/466 (42%), Gaps = 71/466 (15%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +++ G   +   +N L+  L      E A  F  +   YGL P+ +T+  +I   C    
Sbjct: 248 MRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRR 307

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA+ ++D M      PNV  +  L++   + G   EA +++ +M   G +PN  TY+ 
Sbjct: 308 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDN 367

Query: 196 LLKGLCYVGRVE-----------------------------------EAYEMLMNVKNDG 220
           L++GLC +G+++                                   +A+ +L  ++N G
Sbjct: 368 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 427

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + P+VYTY+ ++ G C+ G   +A +LL E   +G+ PN   +  L +GYC+EG      
Sbjct: 428 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 487

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +   M K N LPD   Y++L+ GL K G++  +   F +M   G   +E   + L+ G 
Sbjct: 488 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 547

Query: 341 ------------------------------CMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
                                          ++S+ + D +E     F+ M  +  + D 
Sbjct: 548 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 607

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             YGI+I  L      + A   L    + G +P    ++++I  LC     +KA  +L  
Sbjct: 608 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 667

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYD---ACALYGAALKQGVIP 473
           M +    P+   Y+ LI   D L KS D   A  ++ + L +G++P
Sbjct: 668 MSKKGVDPNIVCYNALI---DGLCKSGDISYARNVFNSILAKGLVP 710



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 169/353 (47%), Gaps = 6/353 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +IFD + K      +  +N L+  L  +   E + K+F++    GL PN +T+S +I  Y
Sbjct: 488 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 547

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
               D   A +++  M D G  PN   +  L+ S  KS  +++       M   G   + 
Sbjct: 548 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 607

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           + Y  L+  L   G +E A+ +L  ++ +G  PDV+ Y++++ G CK     +A  +L+E
Sbjct: 608 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 667

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             ++GV PN+V +N L +G CK G       +   +  +  +P+ ++Y++L++G  K G 
Sbjct: 668 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 727

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I  A  ++ EM+  G   D  + + L  G C  + +    LE A  + E+M  +   +  
Sbjct: 728 ISNAFYLYNEMLATGITPDAFVYSVLTTG-CSSAGD----LEQAMFLIEEMFLRGHAS-I 781

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
            ++  ++    K  K  E L  LH  +  G +P  +T  N+I  L   GK+ +
Sbjct: 782 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSE 834



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 163/350 (46%), Gaps = 5/350 (1%)

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
           + ++ A +  SE  + G++PN +T+SIMI   C   +  +A  +++ M   G  PN   +
Sbjct: 411 HSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 470

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
             L++  C+ G +  A E+ D+M ++   P++  YN L+ GL  VGRVEE+ +    ++ 
Sbjct: 471 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 530

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            GL P+ +TY+ ++ G+ K G    A +L+   ++ G+ PN V +  L   Y K     K
Sbjct: 531 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 590

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
                K M  +  + D   Y  L++ L   G +  A  +   + + G   D  + +SL+ 
Sbjct: 591 VSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLIS 650

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           GLC  +  EK     A+ + ++M+KK    +   Y  +I  L K      A    +  + 
Sbjct: 651 GLCKTADREK-----AFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILA 705

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
            G +P  +T+ ++I   C  G I  A  L   M      P    Y +L T
Sbjct: 706 KGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTT 755



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 182/384 (47%), Gaps = 11/384 (2%)

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           L A   + E +TA K   E    G   N+ T++++I   C      EA      M D G 
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
            P+  T+  L+N LCKS R  EA  +LD+M     KPN+  Y  L+ G    G  +EA++
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           M+  +   G++P+  TY  ++ G CK+G+ + A  LL + +     P+ +T+N +  G+ 
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           +  +      LL  M+     P+  +YS +++GL + G+   A  + +EM   G + +  
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
           +   L+ G C      +  +  A ++F+KMTK   + D   Y  +I  L K  + +E+  
Sbjct: 469 VYAPLISGYC-----REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 523

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY-DMLIT-- 448
           +     E G +P   T++ +I      G ++ A  L+  M +    P+   Y D+L +  
Sbjct: 524 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 583

Query: 449 KLDQLEKSYDACALYGAALKQGVI 472
           K D +EK     + + + L QGV+
Sbjct: 584 KSDDIEK---VSSTFKSMLDQGVM 604



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 40/281 (14%)

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           + + ++ +CKV   + A ++L E  ERG   N VT+N L  G C+ G   +  G  K M+
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 288 KRNCLPDKISYSTLLNGLLK---------------WGKIRPAVSIF-------------- 318
               +PD  +Y  L+NGL K                 +++P V ++              
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 319 ------KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
                 KEMV  G + ++   ++L+RGLC     +   ++ A  + ++M +     D  T
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLC-----KMGQMDRASLLLKQMVRDSHRPDTIT 399

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y ++I    +     +A   L      G  P   T++ +I  LC  G+ +KA  LL  M 
Sbjct: 400 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 459

Query: 433 EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                P+   Y  LI+   +      AC ++    K  V+P
Sbjct: 460 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 500



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 23/242 (9%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F+SI   G   +   +  L+     + +   A   ++E  + G+ P+++ +S++    
Sbjct: 698 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 757

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ-MGRIGCKPN 189
            +  D  +A  +I+ MF  G H ++++F  LV+  CK G+++E L++L   MGR G  PN
Sbjct: 758 SSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGR-GLVPN 815

Query: 190 IQTYNCLLKGLCYVGRVEEAY-------------------EMLMNVKNDGLKPDVYTYTA 230
             T   ++ GL   G++ E +                    + M++ N G  P       
Sbjct: 816 ALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDM 875

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           + D  CK G  ++A+ L +  + +       ++  + +  C++G   + + LLK M KR 
Sbjct: 876 IRD-HCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934

Query: 291 CL 292
            L
Sbjct: 935 NL 936


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 183/373 (49%), Gaps = 16/373 (4%)

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
            + A +  +AP+  TF I+I C C+          +  +   G   +   FT L+ +LC 
Sbjct: 1   MARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCA 60

Query: 168 SGRLKEALE-VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPD 224
             R  +A+  VL +M  +GC P++ +Y+ LLKGLC   + EEA E++  +  DG    PD
Sbjct: 61  KKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPD 120

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
           V +Y+ V+ GF K G   +A  L  + ++ G+ PNVVT N++ +G CK     K   +L+
Sbjct: 121 VVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 180

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            M   + +P+  +Y++L++G L  G+   AV I KEM R G   +    N L+  LC   
Sbjct: 181 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSG 240

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA----IEMG 400
           +       +A ++F  M +     D  TYG    +L  G  T+  L+ +++     ++ G
Sbjct: 241 FH-----AEAREIFNSMIQSGPKPDATTYG----SLLHGYATEGNLVEMNNVKDLMVQNG 291

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
                 TF+  I A C  G++D+A L    M +   +P   +Y  +I  L ++ +  DA 
Sbjct: 292 MRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAM 351

Query: 461 ALYGAALKQGVIP 473
           + +   +  G+ P
Sbjct: 352 SRFCQMIDDGLSP 364



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 154/322 (47%), Gaps = 14/322 (4%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + I   + +DG   +V  +N L+  L        A + F+     G  P++ T+  ++
Sbjct: 209 EAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLL 268

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             Y  + +  E   V D M  NG   N  TF+I + + CK GRL EA     +M ++G  
Sbjct: 269 HGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFM 328

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+I TY  ++ GLC +GR+++A      + +DGL P++ T+T ++ GF   G+  +A EL
Sbjct: 329 PDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEEL 388

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E ++RG+ P+V  F  + +   KEG   +   L  LM +    P+ +SY+T+++G   
Sbjct: 389 FYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFI 448

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------------MKSWEEKDLLED 353
            G++   + +  +M+  G +      N+LL G+               + S  E   +ED
Sbjct: 449 AGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIED 508

Query: 354 AYQVFEKMTKKVSVTDPGTYGI 375
              +F +M  K   TD  T  I
Sbjct: 509 ILTLFREMLGKADKTDTITENI 530



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 161/345 (46%), Gaps = 25/345 (7%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + +N L+   +   +   AV+   E S  G  PN  T++++I C C      EAR++ + 
Sbjct: 192 TTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNS 251

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M  +G  P+ TT+  L++     G L E   V D M + G + N  T++  +   C  GR
Sbjct: 252 MIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGR 311

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++EA    + ++  G  PD+ TYT V+DG CK+GR ++AM    + I+ G++PN++TF T
Sbjct: 312 LDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTT 371

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G+   G   K   L   M  R   PD   ++ +++ L K GK+  A  +F  M R G
Sbjct: 372 LIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAG 431

Query: 326 FEVDERMMNSLLRG--LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            + +    N+++ G  +  +  E   LL+D   +  K T            +   TL   
Sbjct: 432 AKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPT-----------AVTFNTL--- 477

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
                    L   + MG  P   T   +I + C +G+I+  L L 
Sbjct: 478 ---------LDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLF 513



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 7/370 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG--LAPNSWTFSIMIRCYCNKNDFF 137
           G    V  ++ LL  L    + E A +     +  G    P+  ++S +I  +  + D  
Sbjct: 79  GCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVG 138

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           +A  +   M D+G  PNV T   +++ LCK   + +A  VL QM      PN  TYN L+
Sbjct: 139 KAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLI 198

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
            G    G+  EA  +L  +  DG +P+V TY  ++D  CK G   EA E+ N  I+ G  
Sbjct: 199 HGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPK 258

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           P+  T+ +L +GY  EG  ++   +  LM +     +  ++S  +    K G++  A   
Sbjct: 259 PDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLT 318

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F +M + GF  D     +++ GLC     +   L+DA   F +M       +  T+  +I
Sbjct: 319 FIKMQQLGFMPDIVTYTTVIDGLC-----KIGRLDDAMSRFCQMIDDGLSPNIITFTTLI 373

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
                  K ++A    +  ++ G  P    F  +I  L  EGK+ +A  L  LM      
Sbjct: 374 HGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAK 433

Query: 438 PSRTSYDMLI 447
           P+  SY+ +I
Sbjct: 434 PNVVSYNTMI 443



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 16/213 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E    F  +++ G    +  +  ++  L  +   + A+  F +    GL+PN  
Sbjct: 308 KCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNII 367

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +     + +A ++   M D G  P+VT FT +++ L K G++ EA ++ D M
Sbjct: 368 TFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLM 427

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G KPN+ +YN ++ G    G V E  ++L ++   GLKP   T+  ++DG       
Sbjct: 428 PRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM------ 481

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
                     +  G+ P+V T  TL +  C++G
Sbjct: 482 ----------VSMGLKPDVDTCKTLIDSCCEDG 504


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 214/472 (45%), Gaps = 39/472 (8%)

Query: 35  ASLSTAESLDLKENPRSLQAQRFVDRIKASP-LKERIDIFDSIKKDGTNWSVSDFNDLLM 93
           AS+  A S     +P  L     VD  K S  +++  ++   ++  G   S+   N LL 
Sbjct: 33  ASIHRALSDSGHRSPAVLDV--LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLK 90

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
            L+  +      K        G++P+ +T+S +I  YC   +F  A+KV+  M + G   
Sbjct: 91  DLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGL 150

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N  T+ +L+  LC+SG ++EA      M   G  P+  TY  L+ GLC   R  EA  +L
Sbjct: 151 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 210

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +    LKP+V  Y  ++DGF + G ++EA +++ E +  GV PN +T++ L  G CK 
Sbjct: 211 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM 270

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +   LLK M + +  PD I+Y+ ++ G  +    + A  +  EM   G   +    
Sbjct: 271 GQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTY 330

Query: 334 NSLLRGLCMKSWEEK--DLLED----------------------------AYQVFEKMTK 363
           + ++ GLC     EK  DLLE+                            A ++F+KMTK
Sbjct: 331 SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK 390

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
              + D   Y  +I  L K  + +E+  +     E G +P   T++ +I      G ++ 
Sbjct: 391 VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 450

Query: 424 ALLLLFLMYEHAKIPSRTSY-DMLIT--KLDQLEKSYDACALYGAALKQGVI 472
           A  L+  M +    P+   Y D+L +  K D +EK     + + + L QGV+
Sbjct: 451 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK---VSSTFKSMLDQGVM 499



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 200/466 (42%), Gaps = 71/466 (15%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +++ G   +   +N L+  L      E A  F  +   YGL P+ +T+  +I   C    
Sbjct: 143 MRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRR 202

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA+ ++D M      PNV  +  L++   + G   EA +++ +M   G +PN  TY+ 
Sbjct: 203 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDN 262

Query: 196 LLKGLCYVGRVE-----------------------------------EAYEMLMNVKNDG 220
           L++GLC +G+++                                   +A+ +L  ++N G
Sbjct: 263 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAG 322

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + P+VYTY+ ++ G C+ G   +A +LL E   +G+ PN   +  L +GYC+EG      
Sbjct: 323 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 382

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +   M K N LPD   Y++L+ GL K G++  +   F +M   G   +E   + L+ G 
Sbjct: 383 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 442

Query: 341 ------------------------------CMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
                                          ++S+ + D +E     F+ M  +  + D 
Sbjct: 443 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 502

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             YGI+I  L      + A   L    + G +P    ++++I  LC     +KA  +L  
Sbjct: 503 RIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 562

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYD---ACALYGAALKQGVIP 473
           M +    P+   Y+ LI   D L KS D   A  ++ + L +G++P
Sbjct: 563 MSKKGVDPNIVCYNALI---DGLCKSGDISYARNVFNSILAKGLVP 605



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 169/353 (47%), Gaps = 6/353 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +IFD + K      +  +N L+  L  +   E + K+F++    GL PN +T+S +I  Y
Sbjct: 383 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 442

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
               D   A +++  M D G  PN   +  L+ S  KS  +++       M   G   + 
Sbjct: 443 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 502

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           + Y  L+  L   G +E A+ +L  ++ +G  PDV+ Y++++ G CK     +A  +L+E
Sbjct: 503 RIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 562

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             ++GV PN+V +N L +G CK G       +   +  +  +P+ ++Y++L++G  K G 
Sbjct: 563 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 622

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I  A  ++ EM+  G   D  + + L  G C  + +    LE A  + E+M  +   +  
Sbjct: 623 ISNAFYLYNEMLATGITPDAFVYSVLTTG-CSSAGD----LEQAMFLIEEMFLRGHAS-I 676

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
            ++  ++    K  K  E L  LH  +  G +P  +T  N+I  L   GK+ +
Sbjct: 677 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSE 729



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 178/422 (42%), Gaps = 66/422 (15%)

Query: 99  NEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTF 158
           + ++ A +  SE  + G++PN +T+SIMI   C   +  +A  +++ M   G  PN   +
Sbjct: 306 HNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 365

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
             L++  C+ G +  A E+ D+M ++   P++  YN L+ GL  VGRVEE+ +    ++ 
Sbjct: 366 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 425

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE----- 273
            GL P+ +TY+ ++ G+ K G    A +L+   ++ G+ PN V +  L   Y K      
Sbjct: 426 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 485

Query: 274 ------------------------------GTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
                                         G       +L  ++K   +PD   YS+L++
Sbjct: 486 VSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLIS 545

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-----------MKSWEEKDL-- 350
           GL K      A  I  EM + G + +    N+L+ GLC             S   K L  
Sbjct: 546 GLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP 605

Query: 351 -----------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
                            + +A+ ++ +M       D   Y ++          ++A+  +
Sbjct: 606 NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLI 665

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
                 GH   + +FNN++   C  GK+ + L LL ++     +P+  + + +I+ L + 
Sbjct: 666 EEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEA 724

Query: 454 EK 455
            K
Sbjct: 725 GK 726



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 161/362 (44%), Gaps = 43/362 (11%)

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           D+G H +     +LV++  KSGR+++A EV+  M   G  P+I+  N LLK L     + 
Sbjct: 41  DSG-HRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMA 99

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
             +++   +   G+ PDVYTY+ +++ +CKV   + A ++L E  ERG   N VT+N L 
Sbjct: 100 LLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLI 159

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK---------------WGKIR 312
            G C+ G   +  G  K M+    +PD  +Y  L+NGL K                 +++
Sbjct: 160 AGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 219

Query: 313 PAVSIF--------------------KEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLL 351
           P V ++                    KEMV  G + ++   ++L+RGLC M   +   LL
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 279

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
                  ++M +     D  TY ++I    +     +A   L      G  P   T++ +
Sbjct: 280 ------LKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIM 333

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           I  LC  G+ +KA  LL  M      P+   Y  LI+   +      AC ++    K  V
Sbjct: 334 IHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 393

Query: 472 IP 473
           +P
Sbjct: 394 LP 395



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 23/242 (9%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F+SI   G   +   +  L+     + +   A   ++E  + G+ P+++ +S++    
Sbjct: 593 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 652

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ-MGRIGCKPN 189
            +  D  +A  +I+ MF  G H ++++F  LV+  CK G+++E L++L   MGR G  PN
Sbjct: 653 SSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGR-GLVPN 710

Query: 190 IQTYNCLLKGLCYVGRVEEAY-------------------EMLMNVKNDGLKPDVYTYTA 230
             T   ++ GL   G++ E +                    + M++ N G  P       
Sbjct: 711 ALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDM 770

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           + D  CK G  ++A+ L +  + +       ++  + +  C++G   + + LLK M KR 
Sbjct: 771 IRD-HCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829

Query: 291 CL 292
            L
Sbjct: 830 NL 831



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 47/218 (21%), Positives = 85/218 (38%), Gaps = 5/218 (2%)

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
             + L + Y K G       ++ +M+ R   P     + LL  LL+   +     + + M
Sbjct: 49  VLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFM 108

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           V  G   D    ++L+   C K  E     + A +V  +M ++    +  TY ++I  L 
Sbjct: 109 VGAGISPDVYTYSTLIEAYC-KVRE----FDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 163

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           +    +EA        + G +P   T+  +I  LC   + ++A  LL  M      P+  
Sbjct: 164 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 223

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
            Y  LI    +   + +A  +    +  GV P +   D
Sbjct: 224 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYD 261


>gi|222622724|gb|EEE56856.1| hypothetical protein OsJ_06476 [Oryza sativa Japonica Group]
          Length = 538

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 195/426 (45%), Gaps = 17/426 (3%)

Query: 29  LVVFAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSD 87
           + VFA    + A+  D    P  L     V+ + +A    E +  FD +   G   + S 
Sbjct: 72  VAVFAELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASS 131

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            N L+      +E + A +   ++   G+ P+  T+S +I   C      EA  V+D M 
Sbjct: 132 QNILIKMHARRSEFDLAWELIHKS---GVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWML 188

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           +    P V T+T +V + C+ GR+ EA  ++ +M R+GC PN+ TYN L++ LC   + +
Sbjct: 189 EKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFD 248

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           E  ++LM       KP   TY   M+G CK G++ EA+ELL+  +  G+ P   T++ L 
Sbjct: 249 EVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILL 308

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           N  C     +  + LL+   +       ++Y+T+++ L + GK R  + +  +M++ G E
Sbjct: 309 NCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIE 368

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            + R  N L+R LC+     K  L  A  +   +    +V    TY I++       K  
Sbjct: 369 PNTRTFNILIRSLCVGG---KSSL--AKSLIHSLGFAANVV---TYNILLHWFYYHGKLT 420

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           EA   +    E    P  +T+  +I  LC E K D A            + S  S D+L 
Sbjct: 421 EANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACFL-----KSLTSGLSMDVLT 475

Query: 448 TKLDQL 453
             L++L
Sbjct: 476 VLLNRL 481



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 204/419 (48%), Gaps = 24/419 (5%)

Query: 63  ASPLKERIDIFDSIKKD-------GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           A  L E + +F  +K+        G   +V  +N L+ AL     +  A+K F E  + G
Sbjct: 65  AGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASG 124

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           +APN+ + +I+I+ +  +++F  A ++I     +G  P+V T++ L+  LC++G++ EA 
Sbjct: 125 VAPNASSQNILIKMHARRSEFDLAWELI---HKSGVEPDVGTYSTLIAGLCRAGKIVEAW 181

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
            VLD M    C+P +QTY  +++  C  GR+ EA  ++  ++  G  P+V TY  ++   
Sbjct: 182 GVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRAL 241

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
           C   + +E  ++L E+  +   P+ VT+N   NG CK+G   + + LL +M      P  
Sbjct: 242 CDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTA 301

Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDA 354
            ++S LLN L    ++  A+ + +      +       N+++  LC M  W         
Sbjct: 302 YTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGKWR------GI 355

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD--EALIHLHHAIEMGHIPRTITFNNVI 412
            ++   M KK    +  T+ I+IR+L  G K+   ++LIH      +G     +T+N ++
Sbjct: 356 MKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSLIH-----SLGFAANVVTYNILL 410

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
                 GK+ +A  L+ +M E    P   +Y ++I  L +  K   A A +  +L  G+
Sbjct: 411 HWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACFLKSLTSGL 469



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 147/326 (45%), Gaps = 15/326 (4%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRI-------GCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + + + +L  +G L E + V  ++ R        G  PN+  YN L+  L   GR  EA 
Sbjct: 55  YNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEAL 114

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           +    +   G+ P+  +   ++    +    + A EL++++   GV P+V T++TL  G 
Sbjct: 115 KAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIHKS---GVEPDVGTYSTLIAGL 171

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+ G  ++  G+L  M ++NC P   +Y+ ++    + G+I  A  +  EM R G   + 
Sbjct: 172 CRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNV 231

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              N L+R LC     + D  ++  QV  + + K       TY I +  L K  K  EAL
Sbjct: 232 VTYNVLIRALC-----DDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEAL 286

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             L   +  G  P   T++ ++  LC   ++  A+ LL    E        +Y+ +++ L
Sbjct: 287 ELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSL 346

Query: 451 DQLEKSYDACALYGAALKQGVIPQRK 476
            ++ K      L    +K+G+ P  +
Sbjct: 347 CEMGKWRGIMKLLTDMIKKGIEPNTR 372


>gi|356561399|ref|XP_003548969.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 422

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 179/363 (49%), Gaps = 7/363 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN +L + V +     A+    +    G+ PN  T +I+I C+C+      +  V+  + 
Sbjct: 57  FNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNILINCFCHLGHMAFSFSVLGKIL 116

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             GY PN  T T L+  LC    ++++L   D++   G + N  +   LL GLC +G + 
Sbjct: 117 KLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQGFQINHVSCGTLLNGLCKIGEMR 176

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A ++L  +++     +V  Y  ++DG CK    NEA +L +E   RG  PNV+T++TL 
Sbjct: 177 GAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVNEAYDLYSEMDVRGNFPNVITYHTLI 236

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G+C  G  M+  GLLK M  +N  PD  +Y+ L++ L K GK   A+ +  E+ R    
Sbjct: 237 CGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILMDALCKEGK-SYALDLIDEIHRRRQP 295

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            D     SLL G C   +     L+ A  +F+KM ++    +  T+  +   + KG +  
Sbjct: 296 ADVVTYTSLLDGXCKNXY-----LDKAIALFKKMKERRIQPNVYTHSXLTGCV-KGGRLK 349

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            A     H +  G+     T+  +I  LC EG +D+AL +   M ++  IP+  +++++I
Sbjct: 350 NAQEFFQHLLVKGYCIDVWTYTVMISGLCKEGMLDEALAMKXKMEDNGCIPNAVTFEIII 409

Query: 448 TKL 450
             L
Sbjct: 410 CSL 412



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 195/411 (47%), Gaps = 18/411 (4%)

Query: 20  HNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKER-----IDIFD 74
           H++ P  + +V  A +  +    L ++  P  ++     ++I  SP+K +     I +  
Sbjct: 25  HSQPPSIDNVVDDAVSQFN--RMLLMRHTPPIIK----FNKILGSPVKMKYYPAAISLSK 78

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
            ++  G   ++   N L+     L     +     +    G  PN+ T + +I+  C K+
Sbjct: 79  QMEVKGIEPNLVTLNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKD 138

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
           +  ++    D +   G+  N  +   L+N LCK G ++ A+++L  +       N+  YN
Sbjct: 139 EVRKSLHFHDKLVAQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYN 198

Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
            ++ GLC    V EAY++   +   G  P+V TY  ++ GFC  G+  EA  LL E I +
Sbjct: 199 TIIDGLCKDKLVNEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILK 258

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
            + P+V T+N L +  CKEG     + L+  + +R    D ++Y++LL+G  K   +  A
Sbjct: 259 NIDPDVYTYNILMDALCKEGKSY-ALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKA 317

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
           +++FK+M     + +    +S L G C+K       L++A + F+ +  K    D  TY 
Sbjct: 318 IALFKKMKERRIQPN-VYTHSXLTG-CVKGGR----LKNAQEFFQHLLVKGYCIDVWTYT 371

Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           ++I  L K    DEAL       + G IP  +TF  +I +L  + + DKAL
Sbjct: 372 VMISGLCKEGMLDEALAMKXKMEDNGCIPNAVTFEIIICSLFEKDENDKAL 422



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 141/298 (47%), Gaps = 10/298 (3%)

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + P +  F  ++ S  K      A+ +  QM   G +PN+ T N L+   C++G +  ++
Sbjct: 50  HTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNILINCFCHLGHMAFSF 109

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L  +   G +P+  T T ++ G C      +++   ++ + +G   N V+  TL NG 
Sbjct: 110 SVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQGFQINHVSCGTLLNGL 169

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK G     + LL++++ R+ + + + Y+T+++GL K   +  A  ++ EM   G   + 
Sbjct: 170 CKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVNEAYDLYSEMDVRGNFPNV 229

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK-GKKTDEA 389
              ++L+ G C+        L +A+ + ++M  K    D  TY I++  L K GK     
Sbjct: 230 ITYHTLICGFCLAGQ-----LMEAFGLLKEMILKNIDPDVYTYNILMDALCKEGKSYALD 284

Query: 390 LI-HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           LI  +H   +   +   +T+ +++   C    +DKA+ L   M E    P+  ++  L
Sbjct: 285 LIDEIHRRRQPADV---VTYTSLLDGXCKNXYLDKAIALFKKMKERRIQPNVYTHSXL 339



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/246 (20%), Positives = 102/246 (41%), Gaps = 30/246 (12%)

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           ++A+   N  +    TP ++ FN +     K       + L K M+ +   P+ ++ + L
Sbjct: 36  DDAVSQFNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNIL 95

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL----------- 350
           +N     G +  + S+  ++++ G++ +   + +L++GLC+K    K L           
Sbjct: 96  INCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQGF 155

Query: 351 -------------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
                              +  A ++   +  + ++T+   Y  +I  L K K  +EA  
Sbjct: 156 QINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVNEAYD 215

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
                   G+ P  IT++ +I   C  G++ +A  LL  M      P   +Y++L+  L 
Sbjct: 216 LYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILMDALC 275

Query: 452 QLEKSY 457
           +  KSY
Sbjct: 276 KEGKSY 281


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 202/448 (45%), Gaps = 54/448 (12%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K S + + + +FD +KK G    +S ++ ++  L +  + + A+  +SE   + + P+ 
Sbjct: 181 VKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDV 240

Query: 121 WTFSIMIRCYCNKND---FFEA--------------RKVIDCMFDNG-----YH------ 152
              + +I  +  + +   FFE                 V++ + DNG     YH      
Sbjct: 241 KIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAIT 300

Query: 153 ---------------------PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                                PN TTF+I++N L K+G L  A+ +   M RIGCKP++ 
Sbjct: 301 IGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLL 360

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
            YN L+ GLC   R++E+  +L  ++  G++P  +T   +    C+    + A+ LL + 
Sbjct: 361 LYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKM 420

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
              G  P +    +L    CK G  ++    L  M +    PD ++YS  L+GL+K  ++
Sbjct: 421 RIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEV 480

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ +F+++   G+  D    N L++GLC     +   + +A  +  +M +K  V    
Sbjct: 481 DQALKLFQDICAQGYCPDVIAYNILIKGLC-----KTQRIAEAQNLLHEMEEKGLVPSAV 535

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  +I  L K    +EA++ L   IE    P  IT++ +I  LC  G+ D AL+L   M
Sbjct: 536 TYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEM 595

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDA 459
                 PS  +Y   I  L    +  +A
Sbjct: 596 GRKGCTPSSIAYMAFIHGLSNCGRPNEA 623



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 162/340 (47%), Gaps = 14/340 (4%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK   L   + +F  + + G    +  +N+L+  L   N  + +     E    G+ P S
Sbjct: 335 IKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTS 394

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T + +  C C ++D   A  ++  M  +G+ P +   T LV  LCK G+  EA + L  
Sbjct: 395 FTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVD 454

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G +P+I  Y+  L GL  +  V++A ++  ++   G  PDV  Y  ++ G CK  R
Sbjct: 455 MAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQR 514

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             EA  LL+E  E+G+ P+ VT+NTL +G CK     + +  L +M ++   P+ I+YST
Sbjct: 515 IAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYST 574

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-----------MKSWEEKD 349
           L+NGL   G+   A+ ++ EM R G         + + GL            ++  EE++
Sbjct: 575 LINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEERE 634

Query: 350 LLEDAYQVFEKMTKK--VSVTDPGTYGIVIRTLGKGKKTD 387
           +  D Y V+  +     V    P  + I+   + KGK  D
Sbjct: 635 MKPDTY-VYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPD 673



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 172/374 (45%), Gaps = 5/374 (1%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           + F+ ++  L+   + + AV  F + +  G  P+   ++ +I   C  N   E+  ++  
Sbjct: 325 TTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQE 384

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M ++G  P   T   +   LC+   +  AL +L +M   G  P I+    L+K LC  G+
Sbjct: 385 MEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGK 444

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
             EA + L+++  +G +PD+  Y+A +DG  K+   ++A++L  +   +G  P+V+ +N 
Sbjct: 445 EVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNI 504

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L  G CK     +   LL  M+++  +P  ++Y+TL++GL K   +  A+     M+   
Sbjct: 505 LIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKE 564

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            E +    ++L+ GLC          +DA  ++ +M +K        Y   I  L    +
Sbjct: 565 REPNVITYSTLINGLCNAGRP-----DDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGR 619

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            +EAL++L    E    P T  +  ++ A   +     A  +L  M +  K P     + 
Sbjct: 620 PNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLHDKNH 679

Query: 446 LITKLDQLEKSYDA 459
           +  +   L+ S DA
Sbjct: 680 ISVRNAILKFSEDA 693



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 163/365 (44%), Gaps = 11/365 (3%)

Query: 82  NWSVSDFNDLLMALVMLN---EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFE 138
           N SV     LL A+ + N   + E    F  +A    + PNS TFSI+I       D   
Sbjct: 286 NGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAM---VPPNSTTFSIVINGLIKTGDLDL 342

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A  +   M   G  P++  +  L++ LC S RL+E+  +L +M   G +P   T NC+  
Sbjct: 343 AVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFG 402

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
            LC    +  A  +L  ++  G  P +   T+++   CK G+  EA + L +  E G  P
Sbjct: 403 CLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQP 462

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           ++V ++   +G  K     + + L + +  +   PD I+Y+ L+ GL K  +I  A ++ 
Sbjct: 463 DIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLL 522

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
            EM   G        N+L+ GLC     + D LE+A      M +K    +  TY  +I 
Sbjct: 523 HEMEEKGLVPSAVTYNTLIDGLC-----KTDHLEEAMLFLSMMIEKEREPNVITYSTLIN 577

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L    + D+AL+  +     G  P +I +   I  L   G+ ++AL+ L  M E    P
Sbjct: 578 GLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKP 637

Query: 439 SRTSY 443
               Y
Sbjct: 638 DTYVY 642



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 178/397 (44%), Gaps = 34/397 (8%)

Query: 98  LNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT 157
           + E + A+  F+E    G   + + FSI++  +       +A ++I+ M +     N  T
Sbjct: 114 MAEFDKALDVFNEIHDRGWV-DEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKT 172

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F  L+    K  R+ +AL + D+M + G  P+I  Y+ ++ GLC    V++A  +   +K
Sbjct: 173 FCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMK 232

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT--FNTLFNGYCKEGT 275
              ++PDV   T ++  F K     E +    E +   + P   T  +N++ N     G+
Sbjct: 233 GFKIQPDVKIVTKLISSFSK----EEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGS 288

Query: 276 PMKGVGLLKLMKKRNCL----------------PDKISYSTLLNGLLKWGKIRPAVSIFK 319
             K   LL+ +   NC+                P+  ++S ++NGL+K G +  AV +F+
Sbjct: 289 VHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFR 348

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKS--WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           +M R G + D  + N+L+ GLC  +   E   LL+   ++ E   +  S T+   +G + 
Sbjct: 349 DMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQ---EMEESGIEPTSFTNNCIFGCLC 405

Query: 378 RTLGKGKKTDEALIHLHHAIEM-GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           R     +      +HL   + + GH+P      ++++ LC  GK  +A   L  M E   
Sbjct: 406 R-----RHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGF 460

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            P   +Y   +  L ++++   A  L+     QG  P
Sbjct: 461 QPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCP 497



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 105/486 (21%), Positives = 199/486 (40%), Gaps = 84/486 (17%)

Query: 70  IDIFDSIKKDGTNWSVSD--FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           +D+F+ I   G  W V +  F+ L++A     + + A +         +  N  TF  +I
Sbjct: 121 LDVFNEIHDRG--W-VDEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLI 177

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
             +  ++   +A  + D M  +G+ P+++ + +++  LC +  +K+AL +  +M     +
Sbjct: 178 YGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQ 237

Query: 188 PNIQT---------------------------------YNCLLKGLCYVGRVEEAYEMLM 214
           P+++                                  YN +L  L   G V +AY +L 
Sbjct: 238 PDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQ 297

Query: 215 -----NVKNDG-----------LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
                N   DG           + P+  T++ V++G  K G  + A+ L  +    G  P
Sbjct: 298 AITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKP 357

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           +++ +N L +G C      +  GLL+ M++    P   + + +   L +   I  A+ + 
Sbjct: 358 DLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLL 417

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEK------DLLEDAYQ---------------- 356
           K+M   G     +   SL++ LC    E +      D+ E+ +Q                
Sbjct: 418 KKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKI 477

Query: 357 --------VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
                   +F+ +  +    D   Y I+I+ L K ++  EA   LH   E G +P  +T+
Sbjct: 478 QEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTY 537

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           N +I  LC    +++A+L L +M E  + P+  +Y  LI  L    +  DA  L+    +
Sbjct: 538 NTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGR 597

Query: 469 QGVIPQ 474
           +G  P 
Sbjct: 598 KGCTPS 603



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 94/200 (47%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK   + + + +F  I   G    V  +N L+  L        A     E    GL P++
Sbjct: 475 IKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSA 534

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I   C  +   EA   +  M +    PNV T++ L+N LC +GR  +AL + ++
Sbjct: 535 VTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNE 594

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           MGR GC P+   Y   + GL   GR  EA   L  ++   +KPD Y Y  +++ F     
Sbjct: 595 MGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSN 654

Query: 241 SNEAMELLNEAIERGVTPNV 260
              A E+L E +++G  P++
Sbjct: 655 QPLAFEILQEMVDKGKFPDL 674



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 156/359 (43%), Gaps = 48/359 (13%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           L+  L  +G + EA  + DQ+ ++G C PN  +Y CLL+ L     ++     L  + + 
Sbjct: 36  LIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDH 95

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G   D YT T V+  +C +   ++A+++ NE  +RG     V F+ L   + K G   K 
Sbjct: 96  GWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWVDEYV-FSILVLAFSKWGKVDKA 154

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
             L++ M+++N   +K ++ +L+ G +K  ++  A+ +F +M + GF  D  + + ++ G
Sbjct: 155 CELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGG 214

Query: 340 LC--------------MKSWEEKDLLEDAYQVFEKMTKKVSVT----------DPGT--- 372
           LC              MK ++ +  ++   ++    +K+  +T          DP     
Sbjct: 215 LCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTL 274

Query: 373 -YGIVIRTLGKGKKTDEALIHLHHAIEMGHI-----------------PRTITFNNVIQA 414
            Y  V+ +L       +A  HL  AI +G+                  P + TF+ VI  
Sbjct: 275 LYNSVLNSLVDNGSVHKAY-HLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVING 333

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L   G +D A+ L   M      P    Y+ LI  L    +  ++C L     + G+ P
Sbjct: 334 LIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEP 392


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 197/414 (47%), Gaps = 11/414 (2%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L +  D+F   KK G   ++S  N LL  L   ++ E     F +  + G +PN +T++I
Sbjct: 131 LADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTI 190

Query: 126 MIRCYCNKN-----DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           MI  YC +      D  +A  +++ M + G +P V T+ + ++ LC+ G +++A   +  
Sbjct: 191 MINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQD 250

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           +       NI  YN L++G C  GR +EA ++L  +K++G+ PD+Y+Y+ +++ FC  G 
Sbjct: 251 LRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGD 310

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
               M L+ E       P +V   ++  G   +G     +     +  +    D ISYST
Sbjct: 311 IESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYST 370

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G LK   ++ A ++  EM + G   D  +  SL+R  C      K  L++A + F  
Sbjct: 371 LIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYC-----RKGCLKEALKNFYT 425

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +     D  T   ++       + +EALI+++   +   +P + T++ +I  LC    
Sbjct: 426 MLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQA 485

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKL-DQLEKSYDACALYGAALKQGVIP 473
           ++KA  +L +M++    PS   Y  ++     Q +    A  LY    K G  P
Sbjct: 486 VEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKP 539



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 155/350 (44%), Gaps = 45/350 (12%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           ++ F  +   G    +  ++ L+   +  +  ++A     E    GL P+   +  +IR 
Sbjct: 350 LNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIRE 409

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           YC K    EA K    M  +G  P++ T   +V+  C  G+ +EAL  ++QM      PN
Sbjct: 410 YCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPN 469

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG--------------- 234
             TY+ ++  LC    VE+A+E+L  +  D + P V  YT +MDG               
Sbjct: 470 SYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLY 529

Query: 235 ---------------------FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
                                F K G+ ++A+ L  E  E G++ +   F  + +GYC+ 
Sbjct: 530 RKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRV 589

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +   + K MK+ N  P+  +Y+ L++G  K  ++  A  +  +M R     D +  
Sbjct: 590 GNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTY 649

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            +L+ G     ++  + ++ AY+VF++M KK ++ D   Y     TLG G
Sbjct: 650 TALIAG-----YQRIENIDRAYEVFDEMKKKGTLPDHIAY----LTLGLG 690



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/479 (22%), Positives = 195/479 (40%), Gaps = 106/479 (22%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F +A   G+  N  + + +++C    +     R + D + ++G  PNV T+TI++N
Sbjct: 134 AKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMIN 193

Query: 164 SLCKSGR-----LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
             CK        +++A  +L++M   G  P + TY   + GLC VG +E+A+  + ++++
Sbjct: 194 FYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRS 253

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
                ++Y Y A++ GFC+ GR +EA++LL E  + G++P++ +++ L N +C EG    
Sbjct: 254 SNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIES 313

Query: 279 GVGLLKLMKKRNCLP-----------------------------------DKISYSTLLN 303
           G+ L++ M+  N  P                                   D ISYSTL++
Sbjct: 314 GMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIH 373

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL------------- 350
           G LK   ++ A ++  EM + G   D  +  SL+R  C K   ++ L             
Sbjct: 374 GFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQP 433

Query: 351 -----------------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA---- 389
                             E+A     +M  +  + +  TY ++I  L K +  ++A    
Sbjct: 434 DIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVL 493

Query: 390 -----------LIHLHHAIE---------------------MGHIPRTITFNNVIQALCG 417
                      +IH    ++                     +G  P  +T   ++     
Sbjct: 494 PVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSK 553

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            GK+ KAL L   M E        ++  +I    ++     A ++Y    +  V P  K
Sbjct: 554 RGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVK 612


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 179/388 (46%), Gaps = 31/388 (7%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + +  F+++K DG   +   F  L+ A       + A+   SE    GL+P+ +T+S +I
Sbjct: 274 DMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLI 333

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC- 186
              C      +A    + M   G  PN   +  L+   C  G L +A E++ +M   G  
Sbjct: 334 SALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIP 393

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +PNI  +N ++  +C  GRV +A+ +   VK+ G + D+  +  ++DG+C VG   +A  
Sbjct: 394 RPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFS 453

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           +L+  I  G+ P+  T+NTL NGY K G    G+ L + M  +   P  ++Y+ +L+GL 
Sbjct: 454 VLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLF 513

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL--------------- 351
           + G+   A  +  EM+  G  V     N +L+GLC  +  ++ ++               
Sbjct: 514 RAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNIT 573

Query: 352 ---------------EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
                          E+A  +F  ++    V +  TYGI+IR L K    +EA       
Sbjct: 574 TLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSM 633

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKA 424
            + G  P +   N+ I+ L  +G+I KA
Sbjct: 634 EKSGCAPCSRLLNDTIRTLLEKGEIVKA 661



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 203/427 (47%), Gaps = 7/427 (1%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +    F+D + K    KE  +IF S+   G   ++  +  LL            + F
Sbjct: 219 PDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSF 278

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F+     G+  N   F+I+I  Y  +    EA  ++  M   G  P+V T++ L+++LC+
Sbjct: 279 FNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCR 338

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL-KPDVY 226
            GRL +A++  +QM   G +PN   Y+ L++G C  G + +A E++  + N+G+ +P++ 
Sbjct: 339 MGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIA 398

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
            + +++   CK GR  +A  + +   + G   +++ FNTL +GYC  G   K   +L  M
Sbjct: 399 FFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAM 458

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
                 PD  +Y+TL+NG  K G+I   +++F+EM     +      N +L GL    + 
Sbjct: 459 ISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGL----FR 514

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
               +     + E +    +V+ P TY I+++ L +   TDEA++       M       
Sbjct: 515 AGRTVAAQKMLHEMIGCGTTVSLP-TYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNIT 573

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
           T N +I ++    + ++A  L   + +   +P+ ++Y ++I  L +     +A  ++ + 
Sbjct: 574 TLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSM 633

Query: 467 LKQGVIP 473
            K G  P
Sbjct: 634 EKSGCAP 640



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 201/483 (41%), Gaps = 76/483 (15%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + +  +++  + + G    V   N ++ AL      + A     +    G+ PN  
Sbjct: 128 KEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKV 187

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ MI  Y     + EA K+   M   G  P++ ++   ++SLCK GR KEA E+   M
Sbjct: 188 TYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSM 247

Query: 182 GRIGCKPNIQTYNCLLKGL----CYV-------------------------------GRV 206
              G +PNI TY  LL G     C+                                G +
Sbjct: 248 AAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMM 307

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA  +L  ++  GL PDV+TY+ ++   C++GR  +A++  N+ I  GV PN V +++L
Sbjct: 308 DEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSL 367

Query: 267 FNGY------------------------------------CKEGTPMKGVGLLKLMKKRN 290
             G+                                    CKEG  M    +  L+K   
Sbjct: 368 IQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIG 427

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
              D I ++TL++G    G++  A S+   M+  G   D    N+L+ G     + +   
Sbjct: 428 ERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNG-----YFKSGR 482

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           ++D   +F +M+ K       TY I++  L +  +T  A   LH  I  G      T+N 
Sbjct: 483 IDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNI 542

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +++ LC     D+A+++   +       + T+ + +I  +  +++  +A  L+ A    G
Sbjct: 543 ILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSG 602

Query: 471 VIP 473
           ++P
Sbjct: 603 LVP 605



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 168/370 (45%), Gaps = 47/370 (12%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
           +P+  T++ +I  +  +    +A  +   M   G+ P+V T   ++N+LCK+  +  A  
Sbjct: 113 SPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAEL 172

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           +L QM   G  PN  TY  ++ G   +GR EEA +M   +   GL PD+ ++ + MD  C
Sbjct: 173 LLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLC 232

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG---------TPMKGVG------ 281
           K GRS EA E+      +G  PN+VT+  L +GY  EG           MKG G      
Sbjct: 233 KHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCL 292

Query: 282 --------------------LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
                               +L  M+ +   PD  +YSTL++ L + G++  AV  F +M
Sbjct: 293 VFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM 352

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
           +  G + +  + +SL++G C       DL++    V+E M   +   +   +  ++ ++ 
Sbjct: 353 IGTGVQPNTVVYHSLIQGFC----THGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSIC 408

Query: 382 KGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
           K  +  +A    HH  ++    G     I FN +I   C  G++ KA  +L  M      
Sbjct: 409 KEGRVMDA----HHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIG 464

Query: 438 PSRTSYDMLI 447
           P   +Y+ L+
Sbjct: 465 PDTFTYNTLV 474



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 158/349 (45%), Gaps = 8/349 (2%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI-DCMFDNGYHPNVTTFTI 160
           E  + FF      GL  +    + +++C C      +A KV+   M + G  P+  ++ I
Sbjct: 25  ELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAI 84

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIG--CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
           ++  LC   R ++AL++L  M +    C P++ TYN ++ G    G++ +A  +   +  
Sbjct: 85  VLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQ 144

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
            G  PDV T+ ++++  CK    + A  LL + ++ GV PN VT+ ++ +GY   G   +
Sbjct: 145 QGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEE 204

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              + + M  R  +PD +S+++ ++ L K G+ + A  IF  M   G        N +  
Sbjct: 205 ATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRP-----NIVTY 259

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           G+ +  +  +    D    F  M     V +   + I+I    K    DEA++ L     
Sbjct: 260 GILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQG 319

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            G  P   T++ +I ALC  G++  A+     M      P+   Y  LI
Sbjct: 320 QGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLI 368



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 161/359 (44%), Gaps = 43/359 (11%)

Query: 153 PNVTTFTILVNSLCKS----------GRL-------------------------KEALEV 177
           P + T+ +++N  C++          GRL                          +A++V
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 178 -LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML-MNVKNDGL-KPDVYTYTAVMDG 234
            L +M  +GC P+  +Y  +LK LC   R ++A ++L M  K +G+  PDV TY  V+ G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           F K G+  +A  L +E +++G  P+VVT N++ N  CK         LL+ M      P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
           K++Y+++++G    G+   A  +F+EM   G   D    NS +  LC          ++A
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRS-----KEA 240

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            ++F  M  K    +  TYGI++          + +   +     G +   + F  +I A
Sbjct: 241 AEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDA 300

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
               G +D+A+L+L  M      P   +Y  LI+ L ++ +  DA   +   +  GV P
Sbjct: 301 YAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQP 359



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 8/223 (3%)

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           R   P + T+  + NG C+   P  G+     + +     DK + +T+L  L    +   
Sbjct: 2   RVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDD 61

Query: 314 AVSIF-KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG- 371
           AV +  + M   G   D      +L+ LC     + +  + A  +   M K+  V  P  
Sbjct: 62  AVKVLLRRMTELGCVPDAFSYAIVLKRLC-----DDNRSQQALDLLRMMAKEEGVCSPDV 116

Query: 372 -TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY  VI    K  K  +A    H  ++ G +P  +T N++I ALC    +D A LLL  
Sbjct: 117 VTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQ 176

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M ++   P++ +Y  +I     L +  +A  ++     +G+IP
Sbjct: 177 MVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIP 219



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 8/186 (4%)

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P   +Y  ++NG  +  +    ++ F  ++R G + D+   N++L+ LC     +     
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTD----- 60

Query: 353 DAYQVF-EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH-AIEMGHI-PRTITFN 409
           DA +V   +MT+   V D  +Y IV++ L    ++ +AL  L   A E G   P  +T+N
Sbjct: 61  DAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYN 120

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            VI     EGKI KA  L   M +   +P   +++ +I  L +     +A  L    +  
Sbjct: 121 TVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDN 180

Query: 470 GVIPQR 475
           GV P +
Sbjct: 181 GVPPNK 186


>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
          Length = 486

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 144/286 (50%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E I  F  + + G       FN LL+ L+     ETA+  F +   +G++PN+ T++I+I
Sbjct: 186 EAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILI 245

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           R +C+ +    A  + + M   G  P+V T++IL+  LC+  ++K AL VLD+M   G  
Sbjct: 246 RAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYV 305

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+  TYN LL  LC    + EAY +L  +K  G  PDV  Y  V+ GFC+ GR+ +A ++
Sbjct: 306 PDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQI 365

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L +  E G  PN +++ TL NG C EG   +    ++ M     +P    Y  L+ GL  
Sbjct: 366 LRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCN 425

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
            GK+  A  +   M +      E   + LL  +C  S  E   L D
Sbjct: 426 EGKVGEACEVLVMMTKQTLAPHESTWSVLLMRICEDSQTEARELVD 471



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 162/326 (49%), Gaps = 5/326 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A   K    +   ++KDG  ++   F D++     +     A+K F +   +G  P + 
Sbjct: 145 RARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAK 204

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F++++           A  +   + + G  PN  T+ IL+ + C S +L  A  + ++M
Sbjct: 205 HFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKM 264

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + GC P+++TY+ L++GLC   +V+ A  +L  + N G  PD  TY  +++  C+    
Sbjct: 265 HKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNL 324

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA  LL++    G  P+V+ +NT+  G+C+EG  +    +L+ M +  CLP+ +SY TL
Sbjct: 325 REAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTL 384

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +NGL   GK   A    +EM+  GF     + + L+ GLC      +  + +A +V   M
Sbjct: 385 VNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLC-----NEGKVGEACEVLVMM 439

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTD 387
           TK+       T+ +++  + +  +T+
Sbjct: 440 TKQTLAPHESTWSVLLMRICEDSQTE 465



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 159/350 (45%), Gaps = 10/350 (2%)

Query: 104 AVKFFSEASSY-GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG--YHPNVTTFTI 160
           A++ F  AS   G   +  T+  +I        F     +I  M  +G  Y P +  F  
Sbjct: 116 AMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGL--FVD 173

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           ++    + G   EA++   QM   G +P  + +N LL  L     +E A  +   +   G
Sbjct: 174 IIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFG 233

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + P+  TY  ++   C   + + A  L N+  ++G  P+V T++ L  G C++      +
Sbjct: 234 ISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTAL 293

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           G+L  M  +  +PD ++Y+TLLN L +   +R A  +  +M   G   D    N+++ G 
Sbjct: 294 GVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGF 353

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C    E + L  DA Q+   M +   + +  +Y  ++  L    K DEA   +   I  G
Sbjct: 354 CR---EGRAL--DACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNG 408

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            IP    ++ +I  LC EGK+ +A  +L +M +    P  +++ +L+ ++
Sbjct: 409 FIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRI 458



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 5/325 (1%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
           G+  + +T+  L+  L ++ + K    ++ QM + GC      +  +++    VG   EA
Sbjct: 128 GFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEA 187

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
            +    +   G +P    +  ++    +      A+ L  +  E G++PN  T+N L   
Sbjct: 188 IKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRA 247

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
           +C          L   M K+ C+PD  +YS L+ GL +  +++ A+ +  EM+  G+  D
Sbjct: 248 HCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPD 307

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
               N+LL  LC      K  L +AY++  KM       D   Y  VI    +  +  +A
Sbjct: 308 ALTYNTLLNSLC-----RKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDA 362

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
              L    E G +P  +++  ++  LC EGK D+A   +  M  +  IP  + Y +LIT 
Sbjct: 363 CQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITG 422

Query: 450 LDQLEKSYDACALYGAALKQGVIPQ 474
           L    K  +AC +     KQ + P 
Sbjct: 423 LCNEGKVGEACEVLVMMTKQTLAPH 447



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 133/304 (43%), Gaps = 47/304 (15%)

Query: 174 ALEVLDQMGR-IGCKPNIQTYNCLLKGLCYVGRVEEAYEM---LMNVKNDGLKPDVYTYT 229
           A+E+ +   R  G K +  TY+ L+   C +GR  +   M   +  ++ DG       + 
Sbjct: 116 AMEIFEVASRQPGFKHSYSTYHTLI---CKLGRARQFKTMEGLIQQMRKDGCPYTPGLFV 172

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            +++ + +VG  NEA++  ++ +E G  P    FN L                L ++ + 
Sbjct: 173 DIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVL----------------LIVLIEH 216

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
            CL                     A+S+FK++  FG   + R  N L+R  C       D
Sbjct: 217 KCL-------------------ETALSLFKKLHEFGISPNTRTYNILIRAHC-----HSD 252

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            L  AY +F KM K+  + D  TY I+++ L +  +   AL  L   +  G++P  +T+N
Sbjct: 253 KLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYN 312

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
            ++ +LC +  + +A  LL  M      P   +Y+ +IT   +  ++ DAC +     + 
Sbjct: 313 TLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPEN 372

Query: 470 GVIP 473
           G +P
Sbjct: 373 GCLP 376


>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 418

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 157/301 (52%), Gaps = 5/301 (1%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
           F+ E    G   + + F+I++  +C + +   A+ V D +   G  P+V +F  L+N   
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYI 182

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K G L E   + + M   G +P++ TY+ L+ GLC   +++EA+E+   +   GL P+  
Sbjct: 183 KMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGV 242

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+T ++DG CK G+ + AME+  + + +G++P+++T+NTL  G+CK+G   +   L+  M
Sbjct: 243 TFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEM 302

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
             +   PDKI+Y+TL++G  K G +  A    K+M+     +D+ +  +L+ GLC +   
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRS 362

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
                 DA ++  +M       D GTY IV+    K    +     L      GH+P  +
Sbjct: 363 -----VDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVV 417

Query: 407 T 407
           T
Sbjct: 418 T 418



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 132/254 (51%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD+I K G   SV  FN L+   + +   +   +  +   + G  P+ +T+S++I   C
Sbjct: 158 VFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLC 217

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            ++   EA ++ D M + G  PN  TFT L++  CK+G+L  A+E+  Q+   G  P++ 
Sbjct: 218 KESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLI 277

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G C  G +++  +++  +   GLKPD  TYT ++DG CK G    A E   + 
Sbjct: 278 TYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKM 337

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           IE  +  + V +  L +G CKEG  +    +L+ M      PD  +Y+ ++N   K G +
Sbjct: 338 IEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDV 397

Query: 312 RPAVSIFKEMVRFG 325
                + KEM R G
Sbjct: 398 NTGSKLLKEMQRDG 411



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 136/269 (50%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           +  I + G   S+  FN L+       E   A   F   + +GL P+  +F+ ++  Y  
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIK 183

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
                E  ++ + M  +G  P+V T+++L+N LCK  ++ EA E+ D+M   G  PN  T
Sbjct: 184 MGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVT 243

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           +  L+ G C  G+++ A E+   + + GL PD+ TY  ++ GFCK G   +  +L++E  
Sbjct: 244 FTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMS 303

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
            +G+ P+ +T+ TL +G CKEG         K M + N   D + Y+ L++GL K G+  
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSV 363

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
            A  + +EM+  G + D      ++   C
Sbjct: 364 DAEKMLREMLSVGLKPDSGTYTIVMNEFC 392



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 144/355 (40%), Gaps = 75/355 (21%)

Query: 154 NVTTFTILVNSLCKSGRLKEALE-------------------VLDQMGRI---------- 184
           ++  F+ L+ +  +SG L++ALE                   VLD + ++          
Sbjct: 65  DIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFY 124

Query: 185 ------GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
                 G   ++  +N L+   C  G +  A  +   +   GLKP V ++  +M+G+ K+
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKM 184

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G  +E   L N     G  P+V T++ L NG CKE    +   L   M ++  +P+ +++
Sbjct: 185 GILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTF 244

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           +TL++G  K GK+  A+ I+K+++  G   D    N+L+ G C     +K  L+    + 
Sbjct: 245 TTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFC-----KKGDLKQTRDLI 299

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
           ++M+ K                                   G  P  IT+  +I   C E
Sbjct: 300 DEMSMK-----------------------------------GLKPDKITYTTLIDGSCKE 324

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G ++ A      M E         Y  LI+ L +  +S DA  +    L  G+ P
Sbjct: 325 GDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKP 379


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 178/376 (47%), Gaps = 22/376 (5%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I ++  ++ +    S+  FN ++     L E + A    ++    G  P++ T + +I+ 
Sbjct: 68  ISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKG 127

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C      EA    D +   G+  N  ++ IL+N LCK G  + AL+VL ++       N
Sbjct: 128 LCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTN 187

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           +  Y+ ++  LC    V EAYE+   +    + PDV T++A++ GFC VG+  EA  L +
Sbjct: 188 VVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFH 247

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK-----------------KRNCL 292
           E +   + P+V TFN L +  CKEG+  +   +L +M                  KR   
Sbjct: 248 EMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVT 307

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           PD  SY+ ++  L K   +  A+S+F EM   G   D+   +SL+ GLC     + + + 
Sbjct: 308 PDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLC-----KSERIS 362

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A+++ ++M  +    D  TY   +  L K  + D+A+  +    + G  P   T+N +I
Sbjct: 363 HAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILI 422

Query: 413 QALCGEGKIDKALLLL 428
             LC EG+ + A ++ 
Sbjct: 423 DGLCKEGRFENAQVIF 438



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 153/303 (50%), Gaps = 22/303 (7%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A + +S+     ++P+  TFS +I  +C    F EA  +   M     +P+V TF ILV+
Sbjct: 207 AYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD 266

Query: 164 SLCKSGRLKEALEVLDQM-----------------GRIGCKPNIQTYNCLLKGLCYVGRV 206
           +LCK G  KE   VL  M                 G+    P++ +Y  ++K LC +  V
Sbjct: 267 ALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMV 326

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           +EA  +   ++  G+ PD  TY++++DG CK  R + A ELL++   RG   +V+T+ + 
Sbjct: 327 DEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSF 386

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +  CK     K V L+K +K +   P+  +Y+ L++GL K G+   A  IF++++  G+
Sbjct: 387 LHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGY 446

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           +V     N ++ GLC++      L ++A  + EKM       D  TY  +IR L K  + 
Sbjct: 447 KVTVWTYNIMINGLCLEG-----LFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDEN 501

Query: 387 DEA 389
            +A
Sbjct: 502 HKA 504



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 170/380 (44%), Gaps = 22/380 (5%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E +   D +   G   +   +  L+  L  + E   A++   +     +  N   +S 
Sbjct: 134 VHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYST 193

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I   C +    EA ++   M      P+V TF+ L+   C  G+ KEA  +  +M    
Sbjct: 194 IIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTN 253

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEML------MNVKNDG-----------LKPDVYTY 228
             P++ T+N L+  LC  G  +E   +L      +N  N             + PDV++Y
Sbjct: 254 INPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSY 313

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           T ++   CK+   +EA+ L NE   +G+TP+ VT+++L +G CK         LL  M  
Sbjct: 314 TIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHA 373

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           R    D I+Y++ L+ L K  ++  AV++ K++   G + +    N L+ GLC     ++
Sbjct: 374 RGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLC-----KE 428

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
              E+A  +F+ +  K       TY I+I  L      DEA+  L    + G  P  +T+
Sbjct: 429 GRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTY 488

Query: 409 NNVIQALCGEGKIDKALLLL 428
             +I+AL    +  KA  LL
Sbjct: 489 ETIIRALFKNDENHKAEKLL 508



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 132/255 (51%), Gaps = 2/255 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D++ K+G+     +   ++M  V  N+   A   F+      + P+  +++I+I+  C
Sbjct: 264 LVDALCKEGSTKETKNVLAVMMKEV--NQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLC 321

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EA  + + M   G  P+  T++ L++ LCKS R+  A E+LDQM   G   ++ 
Sbjct: 322 KIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVI 381

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY   L  LC   +V++A  ++  +K+ G++P++ TY  ++DG CK GR   A  +  + 
Sbjct: 382 TYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDL 441

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           + +G    V T+N + NG C EG   + + LL+ M+   C PD ++Y T++  L K  + 
Sbjct: 442 LIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDEN 501

Query: 312 RPAVSIFKEMVRFGF 326
             A  + +EM+  G 
Sbjct: 502 HKAEKLLREMIARGL 516



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 116/225 (51%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ I K      V  +  ++  L  +   + A+  F+E    G+ P+  T+S +I   C
Sbjct: 297 VFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLC 356

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A +++D M   G   +V T+T  +++LCK+ ++ +A+ ++ ++   G +PNI 
Sbjct: 357 KSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNIN 416

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ GLC  GR E A  +  ++   G K  V+TY  +++G C  G  +EAM LL + 
Sbjct: 417 TYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKM 476

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
            + G TP+VVT+ T+     K     K   LL+ M  R  L +K+
Sbjct: 477 EDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKV 521



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 94/195 (48%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + +F+ ++  G       ++ L+  L        A +   +  + G   +  
Sbjct: 322 KIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVI 381

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++  +   C  +   +A  ++  + D G  PN+ T+ IL++ LCK GR + A  +   +
Sbjct: 382 TYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDL 441

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G K  + TYN ++ GLC  G  +EA  +L  ++++G  PDV TY  ++    K   +
Sbjct: 442 LIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDEN 501

Query: 242 NEAMELLNEAIERGV 256
           ++A +LL E I RG+
Sbjct: 502 HKAEKLLREMIARGL 516


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 173/377 (45%), Gaps = 5/377 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++ +G   +V  +N ++  +      E A   F E  + GL P+  T++ +I  YC   +
Sbjct: 328 MENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGN 387

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA  +   +   G  P+V T+ IL++  C+ G L+EA     +M   GC+P++ TY  
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+ G   V  +    E    + + GL+PD + Y   +     +G ++EA +L    I RG
Sbjct: 448 LMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG 507

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           ++ + VT+N   +G CK G       L   M      PD I+Y+ L++   + G++R A 
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREAR 567

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            IF  M+  G           +   C      +  L  AY  F+KM ++    +  TY +
Sbjct: 568 DIFDGMLVSGLPPSAVTYTVFIHAYC-----RRGNLYSAYGWFQKMLEEGVRPNEVTYNV 622

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           +I  L +  +T+ A  H H  +E G  P   T+  +I   C EG  ++A+ L   M++H 
Sbjct: 623 LIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHG 682

Query: 436 KIPSRTSYDMLITKLDQ 452
             P   +++ L    D+
Sbjct: 683 IHPDHCTHNALFKGFDE 699



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 155/324 (47%), Gaps = 7/324 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  LKE + +F  +K+ G   SV  +N LL     L + E A +F  E    G  P+  
Sbjct: 384 KAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVS 443

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I++       +    R+  D M   G  P+   +   +++    G   EA ++ + M
Sbjct: 444 TYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVM 503

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G   +  TYN  L GLC  G +++AY + M + +DGL+PD  TYT ++   C+ GR 
Sbjct: 504 ISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRL 563

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA ++ +  +  G+ P+ VT+    + YC+ G      G  + M +    P++++Y+ L
Sbjct: 564 REARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVL 623

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKDLLEDAYQVFEK 360
           ++ L + G+   A   F EM+  G   ++     L+ G C + +WEE      A +++ +
Sbjct: 624 IHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEE------AIRLYSE 677

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGK 384
           M +     D  T+  + +   +G+
Sbjct: 678 MHQHGIHPDHCTHNALFKGFDEGQ 701



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 163/357 (45%), Gaps = 5/357 (1%)

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
           +++TF+ +I  Y  +    +A  +   M + G  P V T+  +++ + +SG ++ A    
Sbjct: 301 SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
            +M  +G  P++ TYN L+ G C  G ++EA  +  ++K  GL P V TY  ++DG+C++
Sbjct: 361 VEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRL 420

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G   EA     E +E+G  P+V T+  L NG  K             M  +   PD  +Y
Sbjct: 421 GDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAY 480

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           +T ++  L  G    A  + + M+  G   D    N  L GLC     +   L+DAY ++
Sbjct: 481 NTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLC-----KSGNLKDAYVLW 535

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            KM       D  TY  +I    +  +  EA       +  G  P  +T+   I A C  
Sbjct: 536 MKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRR 595

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           G +  A      M E    P+  +Y++LI  L ++ ++  A   +   L++G+ P +
Sbjct: 596 GNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNK 652



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 192/433 (44%), Gaps = 33/433 (7%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           F  +   G    + + N +L AL      +     ++E    G+ P+  T++ ++  +  
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 133 KNDFFEARKVIDCM--FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           +    +A K++  M     G  P+  T+ +++N L + G L++A +++D+M R+  K + 
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASA 302

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            T+N L+ G    G VE+A  + + ++N+G+ P V TY  ++ G  + G    A     E
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
               G+ P+++T+N+L NGYCK G   + + L   +K+    P  ++Y+ LL+G  + G 
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGD 422

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRG--------LCMKSWEE---KDLLED------ 353
           +  A    +EMV  G + D      L+ G        +  + ++E   K L  D      
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNT 482

Query: 354 -------------AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
                        A+Q+ E M  +   +D  TY I +  L K     +A +     +  G
Sbjct: 483 RISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDG 542

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDAC 460
             P  IT+  +I A C  G++ +A  +   M      PS  +Y + I    +    Y A 
Sbjct: 543 LQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAY 602

Query: 461 ALYGAALKQGVIP 473
             +   L++GV P
Sbjct: 603 GWFQKMLEEGVRP 615



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 8/275 (2%)

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L    +M   G  P I+  N +L+ L    R ++   +   +   G++P + TY  ++D 
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 235 FCKVGRSNEAMELLNEAIER--GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
           F + GR ++A +LL E   R  G  P+ VT+N + NG  ++G   K   L+  M+     
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-K 299

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
               +++ L+ G    G +  A ++  EM   G        N+++ G+  +S      +E
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGM-FRSGN----VE 354

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            A   F +M     + D  TY  +I    K     EAL         G  P  +T+N ++
Sbjct: 355 AARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILL 414

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              C  G +++A      M E    P  ++Y +L+
Sbjct: 415 DGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILM 449


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 201/439 (45%), Gaps = 38/439 (8%)

Query: 68  ERID-IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           ER+D I+  +K+    +S   +N L+       + E A +F  +    G     ++F+ +
Sbjct: 291 ERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPL 350

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM----- 181
           I  YC +  F EA  V D M + G +P  +T+ I + +LC+ GR+ +A E+L  M     
Sbjct: 351 IEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAPDV 410

Query: 182 --------GRIGCK------------------PNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
                   G I  +                  P+I TYN L+ GLC  G +E A  +   
Sbjct: 411 VSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEE 470

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           + +  + PDV TYT ++ GF K G  + A E+ +E + +G+ P+   + T   G  + G 
Sbjct: 471 MTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGD 530

Query: 276 PMKGVGLLK-LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
             K   L + ++ + +  PD   Y+  ++GL K G +  A+   +++ R G   D     
Sbjct: 531 SEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYT 590

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           +++RG     + EK   + A  ++++M  K       TY ++I    K  + ++A  +  
Sbjct: 591 TVIRG-----YLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYST 645

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
              + G  P  +T N ++  +C  G ID+A   L  M E    P++ SY +LI+K   L+
Sbjct: 646 EMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLD 705

Query: 455 KSYDACALYGAALKQGVIP 473
           K  +   LY   L + + P
Sbjct: 706 KWEEVVKLYKEMLDKEIEP 724



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 117/228 (51%), Gaps = 5/228 (2%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R++   R  D  KA  L E +   D    D T ++V      +  L  +   E A++F  
Sbjct: 521 RTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVR-----IDGLCKVGNLEKAIEFQR 575

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           +    GL P+  T++ +IR Y  K  F  AR + D M      P+V T+ +L++   K+G
Sbjct: 576 KIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAG 635

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           RL++A +   +M + G +PN+ T+N LL G+C  G ++EAY  L  ++ +G+ P+ Y+YT
Sbjct: 636 RLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYT 695

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
            ++   C + +  E ++L  E +++ + P+  T   LF    K+   M
Sbjct: 696 ILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESM 743



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 152/328 (46%), Gaps = 8/328 (2%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           IK     E   +FD +K    N S+  +N L+  L      E A +   E +S  + P+ 
Sbjct: 421 IKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDV 480

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +++ +    +   A ++ D M   G  P+   +T       + G  ++A  + ++
Sbjct: 481 ITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEE 540

Query: 181 M-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
           M       P++  YN  + GLC VG +E+A E    +   GL PD  TYT V+ G+ + G
Sbjct: 541 MVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKG 600

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
           R   A +L +E + + ++P+V+T+  L +G+ K G   +       MKKR   P+ ++++
Sbjct: 601 RFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 660

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-MKSWEEKDLLEDAYQVF 358
            LL+G+ K G I  A     +M   G   ++     L+   C +  WEE        +++
Sbjct: 661 ALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEE------VVKLY 714

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           ++M  K    D  T+  + + L K  ++
Sbjct: 715 KEMLDKEIEPDGYTHRALFKHLEKDHES 742



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 167/395 (42%), Gaps = 45/395 (11%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  P+    +I++R   +     +A++V + M  +G  P V TF  +++S  K+G L+  
Sbjct: 234 GFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERV 293

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            ++  +M R   + +  TYN L+ G    G++EEA     +++  G     Y++  +++G
Sbjct: 294 DKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEG 353

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           +CK G  +EA  + +E +  G+ P   T+N      C+ G       LL  M      PD
Sbjct: 354 YCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM----AAPD 409

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            +SY+TL++G +K  K   A  +F ++            N+L+ GLC     E   LE A
Sbjct: 410 VVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLC-----ESGNLEGA 464

Query: 355 YQVFEKMTKKVSVTD---------------------------------PGTYGIVIRTLG 381
            ++ E+MT ++   D                                 P  Y    RT+G
Sbjct: 465 QRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVG 524

Query: 382 KGKKTD-EALIHLHHAI--EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
           + +  D E    LH  +  E  H P    +N  I  LC  G ++KA+     ++    +P
Sbjct: 525 ELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVP 584

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              +Y  +I    +  +   A  LY   L + + P
Sbjct: 585 DHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSP 619


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 173/326 (53%), Gaps = 7/326 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   +SE     + P   TFS +I  +C    F +A ++ + M     +P+  TF ILV+
Sbjct: 212 AYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK G++KEA  V+  M + G +P + TYN L+ G C V  V +A  +L  +    + P
Sbjct: 272 ALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAP 331

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +  +Y  +++GFCK+   +EA+ L +E   RG+ P+ VT+N+L +G CK G       L+
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391

Query: 284 KLMKKRNCLP-DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
             M   NC+P D ++Y++L++   K   +  A+++ K++   G + +    N L+ GLC 
Sbjct: 392 DEMHN-NCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLC- 449

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
               +   L++A  VF+ +  K    +  TY I+I  L K    DEA + L    + G I
Sbjct: 450 ----KGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGII 505

Query: 403 PRTITFNNVIQALCGEGKIDKALLLL 428
           P  +T+  +IQAL  + + +KA  LL
Sbjct: 506 PDAVTYETIIQALFHKDENEKAQKLL 531



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 217/509 (42%), Gaps = 99/509 (19%)

Query: 63  ASPLKERIDI------------FDSIKKDGTNWSVSDFNDLLMALVML-NEQETAVKFFS 109
           A PLK  + I            F+ +++     S+ +FN +L  L+   N   T +   +
Sbjct: 32  AEPLKTVLSIPNGFVVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLST 91

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI---------------------DCMFD 148
           +  S G+ P+ +T SI+I CYC+      A  V                      D +  
Sbjct: 92  QMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLA 151

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIG--------------CK------ 187
            G+H N  T+ IL+N LCK G+ + AL+VL Q+ G++               CK      
Sbjct: 152 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTD 211

Query: 188 --------------PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
                         P + T++ L+ G C VG+ ++A+ +   +    + PD YT+  ++D
Sbjct: 212 AYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             CK G+  EA  ++   ++ GV P VVT+NTL +GYC      K   +L ++ +    P
Sbjct: 272 ALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAP 331

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-----SWEEK 348
           +  SY+ ++NG  K   +  A+ +F EM   G    +   NSL+ GLC       +WE  
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391

Query: 349 DLLED-------------------------AYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
           D + +                         A  + +K+ +     +  TY I+I  L KG
Sbjct: 392 DEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKG 451

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            +   A       +  G+     T+N +I  LC EG  D+A +LL  M ++  IP   +Y
Sbjct: 452 GQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTY 511

Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVI 472
           + +I  L   +++  A  L    + +GV+
Sbjct: 512 ETIIQALFHKDENEKAQKLLREMVIKGVV 540



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 147/296 (49%), Gaps = 6/296 (2%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP +      VD + K   +KE  ++   + K+G   +V  +N L+    ++NE   A  
Sbjct: 260 NPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKH 319

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
             S  S   +APNS +++IMI  +C      EA  +   M   G  P+  T+  L++ LC
Sbjct: 320 VLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLC 379

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K+GR+  A E++D+M       +I TYN L+   C    V++A  ++  +K  G++P++ 
Sbjct: 380 KAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMC 439

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           TY  ++DG CK G+   A ++  + + +G   N  T+N + NG CKEG   +   LL  M
Sbjct: 440 TYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKM 499

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM-----VRFGFEVDERMMNSLL 337
           +    +PD ++Y T++  L    +   A  + +EM     V + FE+   ++   L
Sbjct: 500 EDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLVGRTL 555



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 147/324 (45%), Gaps = 20/324 (6%)

Query: 153 PNVTTFTILVNSLCKS-GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE 211
           P++  F  ++  L K+       L +  QM   G KP++ T + L+   C++G++  A+ 
Sbjct: 64  PSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFS 123

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +   +   GL              C  G+ NEA+   +  +  G   N VT+  L NG C
Sbjct: 124 VFAKILKMGL--------------CLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLC 169

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
           K G     + +L+ ++ +    + + YST+++GL K   +  A  ++ EM+         
Sbjct: 170 KMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVV 229

Query: 332 MMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
             +SL+ G C+         +DA+++F +M  K    D  T+ I++  L K  K  EA  
Sbjct: 230 TFSSLIYGFCIVGK-----FKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKN 284

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
            +   ++ G  P  +T+N ++   C   ++ KA  +L ++      P+  SY+++I    
Sbjct: 285 VIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFC 344

Query: 452 QLEKSYDACALYGAALKQGVIPQR 475
           +++   +A  L+     +G+ P +
Sbjct: 345 KIKMVDEALCLFHEMCCRGIAPHK 368


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 195/454 (42%), Gaps = 65/454 (14%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +   + + + +   G +  V  +N L+       + + A +      + G+ P+  
Sbjct: 201 KVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVV 260

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T + +I  YC      EA  + + M  +G  P+V T + LV+ LC+ GR  EA  +  +M
Sbjct: 261 THTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREM 320

Query: 182 GRIGCKPNIQTYNCLLKGLCYV-----------------------------------GRV 206
            +IG  PN  TY   +  L  V                                   G++
Sbjct: 321 DKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKI 380

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           EEA ++L +  +D + P+  TYT ++D  C+ G  + A ++L +  E+ V+PNVVTF+++
Sbjct: 381 EEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSI 440

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            NG  K G   K  G ++ MK     P+ ++Y TL++G  K      A+ ++++M+  G 
Sbjct: 441 LNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGV 500

Query: 327 EVDERMMNSLLRGL-----------CMKSWEEKDLLED-------------------AYQ 356
           E +  +++SL+ GL             K   E+ LL D                   A +
Sbjct: 501 EANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALK 560

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           V +++ ++    D   Y + I  L +  K  EA   L      G  P   T+N +I A C
Sbjct: 561 VGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQC 620

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            EG   KAL LL  M   +  P+  +Y  L+  L
Sbjct: 621 REGNTSKALKLLNEMKWSSIKPNLITYTTLVVGL 654



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 175/426 (41%), Gaps = 40/426 (9%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  F+ +L  LV       A  +  +    G+APN  T+  +I  +        A  V 
Sbjct: 433 NVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVY 492

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
             M   G   N      LVN L K+G ++EA  +   MG  G   +   Y  L+ GL   
Sbjct: 493 RDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKT 552

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G +  A ++   +    L PD   Y   ++  C++G+ +EA   L E    G+ P+  T+
Sbjct: 553 GNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATY 612

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           NT+ +  C+EG   K + LL  MK  +  P+ I+Y+TL+ GLL+ G +  A  +  EM  
Sbjct: 613 NTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMAS 672

Query: 324 FGF------------------------EVDERMM-----------NSLLRGLCMKSWEEK 348
            GF                        EV E MM           N+L+  LC      K
Sbjct: 673 AGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRK 732

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
                A  V ++M  +    D  T+  +I    K    D A       +  G  P   TF
Sbjct: 733 -----ATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATF 787

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
           N ++  L   G+I +A  ++  M +    P+  +YD+L+T   +     +A  LY   + 
Sbjct: 788 NTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVS 847

Query: 469 QGVIPQ 474
           +G IP+
Sbjct: 848 KGFIPK 853



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 177/392 (45%), Gaps = 13/392 (3%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++E   +F  + + G      ++  L+  L        A+K   E     L+P++  +++
Sbjct: 520 IEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNV 579

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            I C C    F EA+  +  M + G  P+  T+  ++++ C+ G   +AL++L++M    
Sbjct: 580 FINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSS 639

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN--- 242
            KPN+ TY  L+ GL   G VE+A  +L  + + G  P   TY  V+   C   RS    
Sbjct: 640 IKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA-CSGSRSPYVI 698

Query: 243 -EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            E  EL+  A   G+  ++  +NTL +  C  G   K   +L  M  R   PD I+++ L
Sbjct: 699 LEVHELMMGA---GLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNAL 755

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           + G  K   +  A + + +M+  G   +    N+LL GL     E    + +A  V  +M
Sbjct: 756 ILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGL-----ESAGRIGEADTVICEM 810

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K     +  TY I++    K     EAL      +  G IP+  T+N++I      G +
Sbjct: 811 KKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMM 870

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
           ++A  L   M     + + ++YD+L+    +L
Sbjct: 871 NQAKELFSEMKRRGVLHTSSTYDILLNGWSKL 902



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/459 (22%), Positives = 196/459 (42%), Gaps = 37/459 (8%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +    F+D + K   + E + +   +   G    +  +  ++  L    + E A   
Sbjct: 327 PNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDV 386

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
              A S  + PN  T+++++  +C   +   A +++  M +    PNV TF+ ++N L K
Sbjct: 387 LRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVK 446

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G + +A   + +M   G  PN+ TY  L+ G       E A ++  ++ ++G++ + + 
Sbjct: 447 RGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFI 506

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
             ++++G  K G   EA  L  +  ERG+  + V + TL +G  K G     + + + + 
Sbjct: 507 VDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELM 566

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS--- 344
           +RN  PD + Y+  +N L + GK   A S  KEM   G E D+   N+++   C +    
Sbjct: 567 ERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTS 626

Query: 345 ----------WE-----------------EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
                     W                  E  ++E A  +  +M        P TY  V+
Sbjct: 627 KALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVL 686

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTIT-FNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           +    G ++   ++ +H  +    +   IT +N ++  LC  G   KA ++L  M     
Sbjct: 687 QAC-SGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGI 745

Query: 437 IPSRTSYDMLITKLDQLEKSY--DACALYGAALKQGVIP 473
            P   +++ LI  L   + S+  +A A Y   L QG+ P
Sbjct: 746 APDTITFNALI--LGHCKSSHLDNAFATYAQMLHQGLSP 782



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 118/248 (47%), Gaps = 8/248 (3%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           GL  +   ++ ++   C      +A  V+D M   G  P+  TF  L+   CKS  L  A
Sbjct: 709 GLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNA 768

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
                QM   G  PNI T+N LL GL   GR+ EA  ++  +K  GL+P+  TY  ++ G
Sbjct: 769 FATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTG 828

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           + K     EA+ L  E + +G  P   T+N+L + + K G   +   L   MK+R  L  
Sbjct: 829 YAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHT 888

Query: 295 KISYSTLLNGLLKWGKIRPAVSI---FKEMVRFGFEVDERMMNSLLRGLCMK--SWEEKD 349
             +Y  LLNG   W K+R    +    K+M   GF+  +  ++S+ R       +WE + 
Sbjct: 889 SSTYDILLNG---WSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARR 945

Query: 350 LLEDAYQV 357
           LL+  ++V
Sbjct: 946 LLKTLFKV 953



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/410 (22%), Positives = 174/410 (42%), Gaps = 5/410 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +D++  +  +G   +    + L+  L      E A   F +    GL  +   ++ ++  
Sbjct: 489 LDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDG 548

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
                +   A KV   + +    P+   + + +N LC+ G+  EA   L +M   G +P+
Sbjct: 549 LFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPD 608

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN ++   C  G   +A ++L  +K   +KP++ TYT ++ G  + G   +A  LLN
Sbjct: 609 QATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLN 668

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E    G TP  +T+  +        +P   + + +LM       D   Y+TL++ L   G
Sbjct: 669 EMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHG 728

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
             R A  +  EM+  G   D    N+L+ G C  S      L++A+  + +M  +    +
Sbjct: 729 MTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSH-----LDNAFATYAQMLHQGLSPN 783

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             T+  ++  L    +  EA   +    +MG  P  +T++ ++     +    +AL L  
Sbjct: 784 IATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYC 843

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
            M     IP  ++Y+ LI+   +      A  L+    ++GV+      D
Sbjct: 844 EMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYD 893



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 9/304 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L++ L+     E A    +E +S G  P   T+  +++        +   +V + M 
Sbjct: 647 YTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMM 706

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G H ++T +  LV+ LC  G  ++A  VLD+M   G  P+  T+N L+ G C    ++
Sbjct: 707 GAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLD 766

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A+     + + GL P++ T+  ++ G    GR  EA  ++ E  + G+ PN +T++ L 
Sbjct: 767 NAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILV 826

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            GY K+   ++ + L   M  +  +P   +Y++L++   K G +  A  +F EM R G  
Sbjct: 827 TGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVL 886

Query: 328 VDERMMNSLLRGLC--MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                 + LL G        E + LL+D  ++  K +K       GT   + R   K   
Sbjct: 887 HTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSK-------GTISSMSRAFSKPGM 939

Query: 386 TDEA 389
           T EA
Sbjct: 940 TWEA 943



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 86/187 (45%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+S L      +  +   G + +++ FN LL  L        A     E    GL PN+ 
Sbjct: 761 KSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNL 820

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+ I++  Y  K++  EA ++   M   G+ P  +T+  L++   K+G + +A E+  +M
Sbjct: 821 TYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEM 880

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G      TY+ LL G   +    E   +L ++K  G KP   T +++   F K G +
Sbjct: 881 KRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMT 940

Query: 242 NEAMELL 248
            EA  LL
Sbjct: 941 WEARRLL 947



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 93/217 (42%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D +   G       FN L++     +  + A   +++    GL+PN  TF+ ++    
Sbjct: 736 VLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLE 795

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
           +     EA  VI  M   G  PN  T+ ILV    K     EAL +  +M   G  P   
Sbjct: 796 SAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAS 855

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+      G + +A E+   +K  G+     TY  +++G+ K+    E   LL + 
Sbjct: 856 TYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDM 915

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
            E G  P+  T +++   + K G   +   LLK + K
Sbjct: 916 KELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFK 952



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 127/288 (44%), Gaps = 17/288 (5%)

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP----DVYTYTAVMDGFCKVGRSNEAMEL 247
           T N ++   C +  +  A  +L +  + G +P    D  +Y   + G  + G    A  +
Sbjct: 82  TLNSIILSYCSLHALRPALSLLRS--SSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPV 139

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD--KISYSTLLNGL 305
           L+E  +RGV  + VT +T   G  + G   +   L +++ +   +     + ++ L++G 
Sbjct: 140 LSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGY 199

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K   +  A+++ + M   G  +D    N+L+ G       +      A++V E+M  K 
Sbjct: 200 CKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADA-----AWEVAERM--KA 252

Query: 366 SVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
              +P   T+  +I    K K+ +EA       +  G +P  +T + ++  LC +G+  +
Sbjct: 253 DGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSE 312

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           A  L   M +    P+  +Y   I  L ++++  ++  L G  + +GV
Sbjct: 313 AYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGV 360



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 9/224 (4%)

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK--KRNCLPDKISYSTLLNGLLKWGKI 311
           R V  + +T N++   YC        + LL+     +     D +SY+  L GL + G  
Sbjct: 74  RPVPGDPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHG 133

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           R A  +  EM + G   D   M++ L GL         L+ +A  + E + +   +   G
Sbjct: 134 RLAPPVLSEMCKRGVPWDGVTMSTALVGL-----SRTGLVGEAAALAEMLVRGRGIDGLG 188

Query: 372 TYG--IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             G   +I    K +    AL  +      G     + +N ++      G  D A  +  
Sbjct: 189 VVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAE 248

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            M      PS  ++  LI +  ++++  +A  LY   ++ GV+P
Sbjct: 249 RMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLP 292


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 176/363 (48%), Gaps = 5/363 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +  L+  L  + E E  ++   E      +P+    S ++     +    EA  ++ 
Sbjct: 297 VVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVK 356

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            + D G  PN+  +  L++SLCK  +  EA  + D+MG+IG +PN  TY+ L+   C  G
Sbjct: 357 RVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +++ A   L  + + GLK  VY Y ++++G CK G  + A   + E I + + P VVT+ 
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           +L  GYC +G   K + L   M  +   P   +++TLL+GL + G IR AV +F EM  +
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             + +    N ++ G C    EE D +  A++  ++MT+K  V D  +Y  +I  L    
Sbjct: 537 NVKPNRVTYNVMIEGYC----EEGD-MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
           +  EA + +    +       I +  ++   C EGK+++AL +   M +         Y 
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651

Query: 445 MLI 447
           +LI
Sbjct: 652 VLI 654



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 187/413 (45%), Gaps = 10/413 (2%)

Query: 41  ESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLN 99
           E L L+ +P        V+ + K   ++E +++   +   G + ++  +N L+ +L    
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381

Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
           +   A   F      GL PN  T+SI+I  +C +     A   +  M D G   +V  + 
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
            L+N  CK G +  A   + +M     +P + TY  L+ G C  G++ +A  +   +   
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           G+ P +YT+T ++ G  + G   +A++L NE  E  V PN VT+N +  GYC+EG   K 
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
              LK M ++  +PD  SY  L++GL   G+   A      + +   E++E     LL G
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH--LHHAI 397
            C      +  LE+A  V ++M ++    D   YG++I   G  K  D  L    L    
Sbjct: 622 FC-----REGKLEEALSVCQEMVQRGVDLDLVCYGVLID--GSLKHKDRKLFFGLLKEMH 674

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           + G  P  + + ++I A    G   +A  +  LM     +P+  +Y  +I  L
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 186/410 (45%), Gaps = 40/410 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + ++  +   G   S+  F  LL  L        AVK F+E + + + PN  T+++
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI  YC + D  +A + +  M + G  P+  ++  L++ LC +G+  EA   +D + +  
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C+ N   Y  LL G C  G++EEA  +   +   G+  D+  Y  ++DG  K        
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL E  +RG+ P+ V + ++ +   K G   +  G+  LM    C+P++++Y+ ++NGL
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +  A            EV           LC                  KM    
Sbjct: 728 CKAGFVNEA------------EV-----------LC-----------------SKMQPVS 747

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           SV +  TYG  +  L KG+   +  + LH+AI  G +  T T+N +I+  C +G+I++A 
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEAS 807

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            L+  M      P   +Y  +I +L +      A  L+ +  ++G+ P R
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 174/396 (43%), Gaps = 30/396 (7%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V   + LL  LV       A++ F++  S G+ P+ + ++ +IR  C   D   A+++I 
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G   N+  + +L++ LCK  ++ EA+ +   +     KP++ TY  L+ GLC V 
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
             E   EM+  +      P     +++++G  K G+  EA+ L+   ++ GV+PN+  +N
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 371

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +  CK     +   L   M K    P+ ++YS L++   + GK+  A+S   EMV  
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431

Query: 325 GFEVDERMMNSLLRGLC------------------------------MKSWEEKDLLEDA 354
           G ++     NSL+ G C                              M  +  K  +  A
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
            +++ +MT K       T+  ++  L +     +A+   +   E    P  +T+N +I+ 
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            C EG + KA   L  M E   +P   SY  LI  L
Sbjct: 552 YCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 167/354 (47%), Gaps = 5/354 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++   ++  G + ++  +N L+  L    +   AV    + +   L P+  T+  ++   
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +F    +++D M    + P+    + LV  L K G+++EAL ++ ++   G  PN+
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             YN L+  LC   +  EA  +   +   GL+P+  TY+ ++D FC+ G+ + A+  L E
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            ++ G+  +V  +N+L NG+CK G      G +  M  +   P  ++Y++L+ G    GK
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           I  A+ ++ EM   G         +LL GL         L+ DA ++F +M +     + 
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLF-----RAGLIRDAVKLFNEMAEWNVKPNR 542

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            TY ++I    +     +A   L    E G +P T ++  +I  LC  G+  +A
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 142/291 (48%), Gaps = 6/291 (2%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           F +L+    +S R+ + + V   M  ++   P ++T + LL GL        A E+  ++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            + G++PDVY YT V+   C++   + A E++      G   N+V +N L +G CK+   
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            + VG+ K +  ++  PD ++Y TL+ GL K  +    + +  EM+   F   E  ++SL
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           + GL      ++  +E+A  + +++       +   Y  +I +L KG+K  EA +     
Sbjct: 339 VEGL-----RKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            ++G  P  +T++ +I   C  GK+D AL  L  M +     S   Y+ LI
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 8/208 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALV---MLNEQETAVKFFSEASSYGLAP 118
           K    KE   I+D +  +G   +   +  ++  L     +NE E         SS    P
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS---VP 750

Query: 119 NSWTFSIMIRCYCNKN-DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           N  T+   +        D  +A ++ + +   G   N  T+ +L+   C+ GR++EA E+
Sbjct: 751 NQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASEL 809

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           + +M   G  P+  TY  ++  LC    V++A E+  ++   G++PD   Y  ++ G C 
Sbjct: 810 ITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV 869

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNT 265
            G   +A EL NE + +G+ PN  T  T
Sbjct: 870 AGEMGKATELRNEMLRQGLIPNNKTSRT 897


>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
 gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
          Length = 720

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 193/410 (47%), Gaps = 7/410 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAV--KFFSEASSYGLAPNSWTF 123
           L++ +++   +++DG      +++ ++ +L   N+ +  +  K + E  S  +  +    
Sbjct: 225 LEKALNLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLL 284

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
           + +I  +    D   A   +  +  +G +P  +TF  ++++L   GR +EA  + ++M  
Sbjct: 285 NDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKE 344

Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
            G KP I+ +N LLKG    G ++EA  ++  ++  GL PD +TY  ++D +  VGR   
Sbjct: 345 GGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWES 404

Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
           A  LL +   R V PN   F+ +   Y   G   K   +L+ MK  N  PD+  Y+ +++
Sbjct: 405 ARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMID 464

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
              K+  +  A+  +  M+  G E D    N+L+   C +     D    A ++FE+M +
Sbjct: 465 TFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLID--CHRKHGYHD---RAAELFEEMQE 519

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
           +  +  P TY I+I +LG+ +K DE  I L      G +P  +T+  ++      G+ + 
Sbjct: 520 RGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFND 579

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           A+  L  M      PS T Y+ LI    Q   S  A   Y   +  G+ P
Sbjct: 580 AIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRP 629



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 178/407 (43%), Gaps = 13/407 (3%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++  G N   S F  ++ AL      E A   F E    GL P    F+ +++ Y  K  
Sbjct: 307 VQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGS 366

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA  +I  M  +G  P+  T+ +LV++    GR + A  +L QM     +PN   ++ 
Sbjct: 367 LKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSR 426

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           +L      G  ++ +E+L  +KN  +KPD + Y  ++D F K    + AME  +  +  G
Sbjct: 427 ILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEG 486

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL---LKWGKIR 312
           + P+VVT+NTL + + K G   +   L + M++R  LP   +Y+ ++N L    KW +++
Sbjct: 487 IEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVK 546

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
               +  +M   G      + N +     +  +       DA    E M           
Sbjct: 547 ---ILLGKMQSQGL-----LPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATM 598

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID-KALLLLFLM 431
           Y  +I    +   +++A+      I  G  P  +  N++I A  GE + D +A  +L  M
Sbjct: 599 YNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAF-GEDRRDIEAFSILQYM 657

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQ 478
            E+   P   +Y  L+  L +++K     A+Y   +  G  P  K +
Sbjct: 658 KENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKAR 704



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 148/298 (49%), Gaps = 9/298 (3%)

Query: 50  RSLQAQRFV-DRIKAS-----PLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQET 103
           R++Q   F+  RI AS       ++  ++   +K          +N ++      N  + 
Sbjct: 415 RNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDH 474

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++ +    S G+ P+  T++ +I C+        A ++ + M + GY P  TT+ I++N
Sbjct: 475 AMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMIN 534

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           SL +  +  E   +L +M   G  PN+ TY  L+    + GR  +A + L  +K+ GLKP
Sbjct: 535 SLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKP 594

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
               Y A+++ F + G S +A+      I  G+ P+++  N+L N + ++   ++   +L
Sbjct: 595 SATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSIL 654

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER---MMNSLLR 338
           + MK+ +  PD ++Y+TL+  L++  K     ++++EM+  G   D +   M+ S LR
Sbjct: 655 QYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALR 712



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/388 (21%), Positives = 149/388 (38%), Gaps = 82/388 (21%)

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           ++IL+++L +S +L EA  +L Q   +       TYN L+        +E+A  ++  ++
Sbjct: 182 YSILIHALGRSEKLYEAF-ILSQKQTL----TPLTYNALIGACARNNDLEKALNLMSRMR 236

Query: 218 NDGLKPDVYTYTAVMD-------------------------------------GFCKVGR 240
            DG + D   Y+ ++                                      GF K G 
Sbjct: 237 QDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGD 296

Query: 241 SNEAMELLN------------------------------EAI-----ERGVTPNVVTFNT 265
            N A+  L+                              EAI     E G+ P +  FN 
Sbjct: 297 PNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNA 356

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L  GY ++G+  +   ++  M+K    PD+ +Y  L++     G+   A  + K+M    
Sbjct: 357 LLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQM---- 412

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
            E      N+ +    + S+ ++   +  ++V  +M       D   Y ++I T GK   
Sbjct: 413 -EARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNC 471

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            D A+      +  G  P  +T+N +I      G  D+A  L   M E   +P  T+Y++
Sbjct: 472 LDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNI 531

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIP 473
           +I  L + EK  +   L G    QG++P
Sbjct: 532 MINSLGEQEKWDEVKILLGKMQSQGLLP 559



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
             + ID  +++K  G   S + +N L+ A       E AV  +    S GL P+    + 
Sbjct: 577 FNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNS 636

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +       EA  ++  M +N   P+V T+T L+ +L +  +  +   V ++M   G
Sbjct: 637 LINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSG 696

Query: 186 CKPNIQTYNCLLKGLCYVGRV 206
           C P+ +    L   L Y+ R 
Sbjct: 697 CTPDGKARAMLRSALRYMKRT 717


>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
          Length = 693

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 201/421 (47%), Gaps = 6/421 (1%)

Query: 54  AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASS 113
           AQ  +   +A  L+  + +   ++KDG    +S  N  +  LV+    + A++F      
Sbjct: 133 AQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRR 192

Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
            G+ P+ +T++ +I+  C      +A ++I  M  NG  P+  ++  +++ LCK  R++E
Sbjct: 193 VGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEE 252

Query: 174 ALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
              +L +M    G  P+  TYN L+ GL   G  +EA E L   +    + D   Y+A++
Sbjct: 253 VRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIV 312

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
             FC  GR  EA E++ E I +G  P+VVT++T+ +G+C+ G   +   ++K M K +C 
Sbjct: 313 HSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCK 372

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
           P+ ++++ LLNGL K GK   A  +  +      E +    + +   + M  +  +  L+
Sbjct: 373 PNTVTHTALLNGLCKVGKTSEAWELLNKS-----EEEWWTPSDITYSVVMHGFRREGKLK 427

Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
           ++  V  +M +K          ++I  L K  K  EA   +      G     + F  VI
Sbjct: 428 ESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVI 487

Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
                +G ++ AL L+  MY   + P   +Y +++  L +  +  +A  L    L +G++
Sbjct: 488 HGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLL 547

Query: 473 P 473
           P
Sbjct: 548 P 548



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 178/361 (49%), Gaps = 9/361 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N L+  L      + A++F  E+       +   +S ++  +C      EA++++  M 
Sbjct: 273 YNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMI 332

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  P+V T++ +V+  C+ G L +A +++  M +  CKPN  T+  LL GLC VG+  
Sbjct: 333 SKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTS 392

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA+E+L   + +   P   TY+ VM GF + G+  E+ +++ + +++G  P  V  N L 
Sbjct: 393 EAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLI 452

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +  CK+G P +    ++  + + C  + ++++T+++G  + G +  A+S+  +M      
Sbjct: 453 HALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMY----- 507

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI-RTLGKGKKT 386
           +  R  + +   + + +  +K  L++A  + EKM  +  +  P TY  VI R   KG   
Sbjct: 508 LSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLE 567

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
           D   +       +        +N V++ LC  GK+++A  LL+ +   A +    +  +L
Sbjct: 568 DLLNLLEKM---LARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHIL 624

Query: 447 I 447
           +
Sbjct: 625 M 625



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 169/348 (48%), Gaps = 6/348 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A +FF  A       ++  F+ ++  Y        A +V+  M  +G  P+++   + VN
Sbjct: 113 AFEFFRWADRQWRYRHAPEFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVN 172

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            L  +GR+ +ALE  ++M R+G +P++ TYNCL+KGLC   RV +A EM+  +  +G  P
Sbjct: 173 VLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPP 232

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAI-ERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           D  +Y  VM   CK  R  E   LL     + G+ P+ VT+N L +G  K G   + +  
Sbjct: 233 DKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEF 292

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L+  + +    D++ YS +++     G++  A  I  EM+  G + D    ++++ G C 
Sbjct: 293 LRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCR 352

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
                   L+ A ++ + M K     +  T+  ++  L K  KT EA   L+ + E    
Sbjct: 353 IGE-----LDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWT 407

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           P  IT++ V+     EGK+ ++  ++  M +    P+    ++LI  L
Sbjct: 408 PSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHAL 455



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 148/339 (43%), Gaps = 44/339 (12%)

Query: 79  DGTNWSVSD--FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           +G  + V +  ++ ++ +  +      A +   E  S G  P+  T+S ++  +C   + 
Sbjct: 297 EGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGEL 356

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCK----------------------------- 167
            +ARK++  M+ N   PN  T T L+N LCK                             
Sbjct: 357 DQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVV 416

Query: 168 ------SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
                  G+LKE+ +V+ QM + G  P     N L+  LC  G+  EA + +   ++ G 
Sbjct: 417 MHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGC 476

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
             +V  +T V+ GF + G    A+ L+++       P+VVT+  + +   K+G   +  G
Sbjct: 477 TINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATG 536

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L++ M  R  LP  ++Y T+++   + G +   +++ ++M     +  +   N ++  LC
Sbjct: 537 LVEKMLNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLEKM--LARQEMKSAYNQVVEKLC 594

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
                    L +AY +  K+ +  SV D  T  I++ + 
Sbjct: 595 AFG-----KLNEAYSLLYKILRTASVRDAQTCHILMESF 628



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 4/234 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   LKE  D+   + + G   +  + N L+ AL    +   A  F  +  S G   N  
Sbjct: 422 REGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVV 481

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            F+ +I  +  + D   A  ++D M+ +  HP+V T+T++V++L K GRLKEA  ++++M
Sbjct: 482 NFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKM 541

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGLKPDVYTYTAVMDGFCKVGR 240
              G  P   TY  ++   C  G +E+   +L   +    +K     Y  V++  C  G+
Sbjct: 542 LNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKS---AYNQVVEKLCAFGK 598

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            NEA  LL + +      +  T + L   +   G  ++   +   M +RN +PD
Sbjct: 599 LNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPD 652


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 205/470 (43%), Gaps = 70/470 (14%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN---------- 119
           + ++D+++K G + +V  +N L+ AL   +  + A K   E S  G  P+          
Sbjct: 89  VPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSG 148

Query: 120 --------------------SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
                                 +++ ++   C +   +E   V++ M   G  PNV T+T
Sbjct: 149 MCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYT 208

Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT--------------------------- 192
            +V++ CK+  L+ A  +L +M  +GC PN+ T                           
Sbjct: 209 TIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE 268

Query: 193 --------YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
                   YN L++GLC +G ++ A +   ++K + L P+  TY+ ++DGF   G  + A
Sbjct: 269 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 328

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           M + NE    G  PNVV +  + +  CK+    +   L+  M   NC P+ ++++TL+  
Sbjct: 329 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGR 388

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           L   G++  A+++F  M R G   ++R  N LL GL    + E +  +DA+ +  +M   
Sbjct: 389 LCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGL----FREGN-HKDAFAMVIEMLNN 443

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
                  TY  VI  L +      A++ L   +  G  P   TFN +I A C EGK+  A
Sbjct: 444 GFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIA 503

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
             LL  M       +  +Y +LI++L    K  +A       L +G+ P 
Sbjct: 504 ACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPN 553



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 175/384 (45%), Gaps = 11/384 (2%)

Query: 94  ALVMLNEQETAVKFFSEASSYGLA-PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
           A       + A+K F  AS  G   P    ++ ++     +N       V D M   G  
Sbjct: 42  AFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVD 101

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           PNV T+ +L+ +LC++ R+  A ++LD+M R GC P+  ++  ++ G+C +GRVEEA   
Sbjct: 102 PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGF 161

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L         P   +Y AV+   C   R  E   ++NE ++RG+ PNVVT+ T+ + +CK
Sbjct: 162 LAET-----VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCK 216

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                    +L  M    C P+ ++++ L+ G  + GK+  A+S++  MV  G+      
Sbjct: 217 ARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTIS 276

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+RGLC         L+ A   F  M +   + +  TY  ++         D A++ 
Sbjct: 277 YNVLIRGLCCIG-----DLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLI 331

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
            +     G  P  + + N+I  LC +   D+A  L+  M      P+  +++ LI +L  
Sbjct: 332 WNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCD 391

Query: 453 LEKSYDACALYGAALKQGVIPQRK 476
             +   A  ++    + G  P  +
Sbjct: 392 CGRVGRALNVFHGMRRNGCHPNDR 415



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 178/387 (45%), Gaps = 10/387 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
            V  +N LL AL+  N     V  +      G+ PN +T++++IR  C  +    ARK++
Sbjct: 68  GVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKML 127

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M   G HP+  +   +V+ +CK GR++EA   L +       P   +YN ++  LC  
Sbjct: 128 DEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQASYNAVVHALCGE 182

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
            R+ E + ++  +   GL+P+V TYT ++D FCK      A  +L   +  G TPNV+TF
Sbjct: 183 FRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 242

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             L  G+ ++G     + +   M      P  ISY+ L+ GL   G ++ A+  F  M R
Sbjct: 243 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKR 302

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
                +    ++L+ G     +     L+ A  ++ +M       +   Y  +I  L K 
Sbjct: 303 NALLPNATTYSTLVDG-----FSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKK 357

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
              D+A   +   +     P T+TFN +I  LC  G++ +AL +   M  +   P+  +Y
Sbjct: 358 MMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTY 417

Query: 444 DMLITKLDQLEKSYDACALYGAALKQG 470
           + L+  L +     DA A+    L  G
Sbjct: 418 NELLHGLFREGNHKDAFAMVIEMLNNG 444



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 142/275 (51%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           LK  +D F+S+K++    + + ++ L+       + + A+  ++E  S G  PN   ++ 
Sbjct: 290 LKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTN 349

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI   C K  F +A  +ID M  +   PN  TF  L+  LC  GR+  AL V   M R G
Sbjct: 350 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 409

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN +TYN LL GL   G  ++A+ M++ + N+G +  + TY  V++  C++     AM
Sbjct: 410 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM 469

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL   + +G+ P+  TFN + + YCKEG       LL  M   NC  + ++Y+ L++ L
Sbjct: 470 LLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISEL 529

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
              GK+  A+    +M+  G   +E   N L+R +
Sbjct: 530 CNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 564



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 174/383 (45%), Gaps = 5/383 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   + + + + G   +V  +  ++ A     E   A    +   S G  PN  TF+ ++
Sbjct: 187 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 246

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           + +       +A  +   M D G+ P+  ++ +L+  LC  G LK AL+  + M R    
Sbjct: 247 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALL 306

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  TY+ L+ G    G ++ A  +   +K+ G KP+V  YT ++D  CK    ++A  L
Sbjct: 307 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESL 366

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           +++ +     PN VTFNTL    C  G   + + +   M++  C P+  +Y+ LL+GL +
Sbjct: 367 IDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFR 426

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            G  + A ++  EM+  GFE+     N+++  LC     +  +L     +  +M  +   
Sbjct: 427 EGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAML-----LLGRMMVQGIQ 481

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  T+  +I    K  K   A   L     +      + +  +I  LC +GK+  A++ 
Sbjct: 482 PDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVY 541

Query: 428 LFLMYEHAKIPSRTSYDMLITKL 450
           L  M      P+  ++++L+  +
Sbjct: 542 LLKMLYEGICPNEATWNVLVRAI 564



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 152/354 (42%), Gaps = 5/354 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  L+    I   +   G   +V  F  L+       +   A+  +      G AP++ 
Sbjct: 216 KARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTI 275

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +++++IR  C   D   A    + M  N   PN TT++ LV+    +G L  A+ + ++M
Sbjct: 276 SYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM 335

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GCKPN+  Y  ++  LC     ++A  ++  +  D   P+  T+  ++   C  GR 
Sbjct: 336 KSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRV 395

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+ + +     G  PN  T+N L +G  +EG       ++  M         ++Y+T+
Sbjct: 396 GRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTV 455

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +N L +    + A+ +   M+  G + D    N+++   C     ++  +  A  +  +M
Sbjct: 456 INCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYC-----KEGKVSIAACLLGQM 510

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
                  +   Y I+I  L    K   A+++L   +  G  P   T+N +++A+
Sbjct: 511 NAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 564


>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 189/397 (47%), Gaps = 30/397 (7%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V     LL  L    +   A+K        G+ P++ +++ ++   C K +   A
Sbjct: 92  GQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYA 151

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            +++D M + GY  N  T+  LV  LC  G L ++L++LD++ + G  PN  TY+ LL+ 
Sbjct: 152 MQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEA 211

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
                  +EA ++L  +   G KP++ +Y  ++ G CK GR+ +AM+L  E   +G +PN
Sbjct: 212 AYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPN 271

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VV++N L    C EG   +   LL  M      P  ++Y+ L+  L   G+   A+ + +
Sbjct: 272 VVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLE 331

Query: 320 EMVRFGFEVDERMMNSLLRGLC-----------------------------MKSWEEKDL 350
           EM+R  F+      N ++  LC                             + +  E+ +
Sbjct: 332 EMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGM 391

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           +++A+ + + +  K   +    Y IVI +L +   T  A   L+   + G  P + T+++
Sbjct: 392 VQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSS 451

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +I+ LC EG +++A+ +  +M E+ K+ +  +Y+ LI
Sbjct: 452 LIRGLCMEGMLNEAIEIFSVMEENIKLDTE-NYNSLI 487



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 177/389 (45%), Gaps = 40/389 (10%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + D +++ G   + + +N L+  L M      +++        GL PN++T+S ++  
Sbjct: 152 MQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEA 211

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
              +    EA K++D +   G  PN+ ++ +L+  LCK GR ++A+++  ++   G  PN
Sbjct: 212 AYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPN 271

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + +YN LL+ LC  GR EEA  +L  +  D   P   TY  ++      GR+  A+E+L 
Sbjct: 272 VVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLE 331

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL-------- 301
           E I     P   ++N +    CK+      V  L  M  R+C P++ +Y+ +        
Sbjct: 332 EMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGM 391

Query: 302 --------------------------LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
                                     +  L + G   PA  +  EM ++GF  D    +S
Sbjct: 392 VQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSS 451

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+RGLCM+      +L +A ++F  M + + + D   Y  +I    K ++TD AL     
Sbjct: 452 LIRGLCMEG-----MLNEAIEIFSVMEENIKL-DTENYNSLILGCCKSRRTDLALDVFEI 505

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            +  G++    T+  +++ +  E ++D A
Sbjct: 506 MVGKGYLANETTYTILVEGIIHEKEMDLA 534



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 156/308 (50%), Gaps = 9/308 (2%)

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           ++ M + G  P+V   T L+  LCK+ ++++A++V++ M   G  P+  +Y  L+  LC 
Sbjct: 85  LEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCR 144

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            G V  A +++  ++  G   +  TY +++ G C  G   ++++LL+  I++G+ PN  T
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           ++ L     KE    +   LL  +  +   P+ +SY+ LL GL K G+   A+ +F+E+ 
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264

Query: 323 RFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
             GF  +    N LLR LC +  WEE ++L       E+    V      TY I+I +L 
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTV------TYNILIGSLT 318

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL-FLMYEHAKIPSR 440
              +T+ AL  L   I     P   ++N +I  LC + K+D  +  L  +MY H   P+ 
Sbjct: 319 LHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCN-PNE 377

Query: 441 TSYDMLIT 448
            +Y+ + T
Sbjct: 378 GTYNAIAT 385



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 139/284 (48%), Gaps = 5/284 (1%)

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K  RL +A   L+ M   G KP++     LL  LC   ++ +A +++  +   G+ PD  
Sbjct: 74  KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           +YT ++   C+ G    AM+L+++  E G   N  T+N+L  G C  G   + + LL  +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            ++  +P+  +YS LL    K      A  +  E++  G + +    N LL GLC     
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC----- 248

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
           ++   EDA Q+F ++  K    +  +Y I++R+L    + +EA + L         P T+
Sbjct: 249 KEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTV 308

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           T+N +I +L   G+ + AL +L  M      P+ +SY+ +I +L
Sbjct: 309 TYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARL 352



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 136/324 (41%), Gaps = 72/324 (22%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   + D I   G   ++  +N LL  L      E A++ F E  S G +PN  +++I++
Sbjct: 220 EASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILL 279

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI--- 184
           R  CN+  + EA  ++  M  +   P+  T+ IL+ SL   GR + ALEVL++M R    
Sbjct: 280 RSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFK 339

Query: 185 --------------------------------GCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
                                            C PN  TYN +   LC  G V+EA+ +
Sbjct: 340 PTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAI-ATLCEEGMVQEAFSI 398

Query: 213 LMNVKND-----------------------------------GLKPDVYTYTAVMDGFCK 237
           + ++ N                                    G  PD +TY++++ G C 
Sbjct: 399 IQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCM 458

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G  NEA+E+ +  +E  +  +   +N+L  G CK       + + ++M  +  L ++ +
Sbjct: 459 EGMLNEAIEIFS-VMEENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETT 517

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEM 321
           Y+ L+ G++   ++  A  + +E+
Sbjct: 518 YTILVEGIIHEKEMDLATEVLREL 541



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 5/191 (2%)

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L+ M ++   PD    + LL  L K  K+R A+ + + M+  G   D      L+  LC 
Sbjct: 85  LEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCR 144

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
           K       +  A Q+ +KM +    T+  TY  ++R L       ++L  L   I+ G +
Sbjct: 145 KGN-----VGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLV 199

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P   T++ +++A   E   D+A  LL  +      P+  SY++L+T L +  ++ DA  L
Sbjct: 200 PNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQL 259

Query: 463 YGAALKQGVIP 473
           +     +G  P
Sbjct: 260 FRELPSKGFSP 270



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 4/166 (2%)

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWT---FSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           A+  L E+    + FS   S G   +  T   + I+I   C K + + A +++  M   G
Sbjct: 382 AIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYG 441

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + P+  T++ L+  LC  G L EA+E+   M     K + + YN L+ G C   R + A 
Sbjct: 442 FTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSLILGCCKSRRTDLAL 500

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           ++   +   G   +  TYT +++G       + A E+L E   R V
Sbjct: 501 DVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDV 546


>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 189/397 (47%), Gaps = 30/397 (7%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V     LL  L    +   A+K        G+ P++ +++ ++   C K +   A
Sbjct: 92  GQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYA 151

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            +++D M + GY  N  T+  LV  LC  G L ++L++LD++ + G  PN  TY+ LL+ 
Sbjct: 152 MQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEA 211

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
                  +EA ++L  +   G KP++ +Y  ++ G CK GR+ +AM+L  E   +G +PN
Sbjct: 212 AYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPN 271

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VV++N L    C EG   +   LL  M      P  ++Y+ L+  L   G+   A+ + +
Sbjct: 272 VVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLE 331

Query: 320 EMVRFGFEVDERMMNSLLRGLC-----------------------------MKSWEEKDL 350
           EM+R  F+      N ++  LC                             + +  E+ +
Sbjct: 332 EMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGM 391

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           +++A+ + + +  K   +    Y IVI +L +   T  A   L+   + G  P + T+++
Sbjct: 392 VQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSS 451

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +I+ LC EG +++A+ +  +M E+ K+ +  +Y+ LI
Sbjct: 452 LIRGLCMEGMLNEAIEIFSVMEENIKLDTE-NYNSLI 487



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 177/389 (45%), Gaps = 40/389 (10%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + + D +++ G   + + +N L+  L M      +++        GL PN++T+S ++  
Sbjct: 152 MQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEA 211

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
              +    EA K++D +   G  PN+ ++ +L+  LCK GR ++A+++  ++   G  PN
Sbjct: 212 AYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPN 271

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + +YN LL+ LC  GR EEA  +L  +  D   P   TY  ++      GR+  A+E+L 
Sbjct: 272 VVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLE 331

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL-------- 301
           E I     P   ++N +    CK+      V  L  M  R+C P++ +Y+ +        
Sbjct: 332 EMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGM 391

Query: 302 --------------------------LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
                                     +  L + G   PA  +  EM ++GF  D    +S
Sbjct: 392 VQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSS 451

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
           L+RGLCM+      +L +A ++F  M + + + D   Y  +I    K ++TD AL     
Sbjct: 452 LIRGLCMEG-----MLNEAIEIFSVMEENIKL-DTENYNSLILGCCKSRRTDLALDVFEI 505

Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            +  G++    T+  +++ +  E ++D A
Sbjct: 506 MVGKGYLANETTYTILVEGIIHEKEMDLA 534



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 156/308 (50%), Gaps = 9/308 (2%)

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           ++ M + G  P+V   T L+  LCK+ ++++A++V++ M   G  P+  +Y  L+  LC 
Sbjct: 85  LEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCR 144

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
            G V  A +++  ++  G   +  TY +++ G C  G   ++++LL+  I++G+ PN  T
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           ++ L     KE    +   LL  +  +   P+ +SY+ LL GL K G+   A+ +F+E+ 
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264

Query: 323 RFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
             GF  +    N LLR LC +  WEE ++L       E+    V      TY I+I +L 
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTV------TYNILIGSLT 318

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL-FLMYEHAKIPSR 440
              +T+ AL  L   I     P   ++N +I  LC + K+D  +  L  +MY H   P+ 
Sbjct: 319 LHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCN-PNE 377

Query: 441 TSYDMLIT 448
            +Y+ + T
Sbjct: 378 GTYNAIAT 385



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 139/284 (48%), Gaps = 5/284 (1%)

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           K  RL +A   L+ M   G KP++     LL  LC   ++ +A +++  +   G+ PD  
Sbjct: 74  KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           +YT ++   C+ G    AM+L+++  E G   N  T+N+L  G C  G   + + LL  +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
            ++  +P+  +YS LL    K      A  +  E++  G + +    N LL GLC     
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC----- 248

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
           ++   EDA Q+F ++  K    +  +Y I++R+L    + +EA + L         P T+
Sbjct: 249 KEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTV 308

Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           T+N +I +L   G+ + AL +L  M      P+ +SY+ +I +L
Sbjct: 309 TYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARL 352



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 136/324 (41%), Gaps = 72/324 (22%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   + D I   G   ++  +N LL  L      E A++ F E  S G +PN  +++I++
Sbjct: 220 EASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILL 279

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI--- 184
           R  CN+  + EA  ++  M  +   P+  T+ IL+ SL   GR + ALEVL++M R    
Sbjct: 280 RSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFK 339

Query: 185 --------------------------------GCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
                                            C PN  TYN +   LC  G V+EA+ +
Sbjct: 340 PTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAI-ATLCEEGMVQEAFSI 398

Query: 213 LMNVKND-----------------------------------GLKPDVYTYTAVMDGFCK 237
           + ++ N                                    G  PD +TY++++ G C 
Sbjct: 399 IQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCM 458

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            G  NEA+E+ +  +E  +  +   +N+L  G CK       + + ++M  +  L ++ +
Sbjct: 459 EGMLNEAIEIFS-VMEENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETT 517

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEM 321
           Y+ L+ G++   ++  A  + +E+
Sbjct: 518 YTILVEGIIHEKEMDLATEVLREL 541



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 5/191 (2%)

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
           L+ M ++   PD    + LL  L K  K+R A+ + + M+  G   D      L+  LC 
Sbjct: 85  LEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCR 144

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
           K       +  A Q+ +KM +    T+  TY  ++R L       ++L  L   I+ G +
Sbjct: 145 KGN-----VGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLV 199

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
           P   T++ +++A   E   D+A  LL  +      P+  SY++L+T L +  ++ DA  L
Sbjct: 200 PNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQL 259

Query: 463 YGAALKQGVIP 473
           +     +G  P
Sbjct: 260 FRELPSKGFSP 270



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 4/166 (2%)

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWT---FSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           A+  L E+    + FS   S G   +  T   + I+I   C K + + A +++  M   G
Sbjct: 382 AIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYG 441

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           + P+  T++ L+  LC  G L EA+E+   M     K + + YN L+ G C   R + A 
Sbjct: 442 FTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSLILGCCKSRRTDLAL 500

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           ++   +   G   +  TYT +++G       + A E+L E   R V
Sbjct: 501 DVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDV 546


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 179/370 (48%), Gaps = 5/370 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
            +    E  + GL P   T+  ++     K D  +   ++  M +    PNV  +  +++
Sbjct: 313 GILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVID 372

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +LCK     +AL VL QM   GC P+  T++ L+ GLC  GRV+EA  +L       L P
Sbjct: 373 ALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNP 432

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           ++ +YT+++ GFC  G    A  LL E +ERG TP+VVTF  L +G    G   + + + 
Sbjct: 433 NLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVR 492

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
           + M  R  LPD   Y+ L++GL K   +  A ++ +EM+      D+ +  +L+ G    
Sbjct: 493 EKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFI-- 550

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                + L++A ++FE M +K    D   Y  +I+   +    +EA+  +    ++G IP
Sbjct: 551 ---RNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIP 607

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
              T+  +I     +G I  AL LL  M +    P+  +Y  LI    +L  +  A  L+
Sbjct: 608 DEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLF 667

Query: 464 GAALKQGVIP 473
           G+   QG+ P
Sbjct: 668 GSMESQGLFP 677



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 180/394 (45%), Gaps = 6/394 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +   ++  G   +V  +  L+  L    + E      SE     L PN   ++ +I  
Sbjct: 314 ILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDA 373

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C      +A  V+  MF  G  P+  TF+ L++ LC+ GR++EA  +L +  R    PN
Sbjct: 374 LCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPN 433

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + +Y  L+ G C  G V  A  +L+ +   G  PDV T+ A++ G    G+ +EA+ +  
Sbjct: 434 LSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVRE 493

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           +   R + P+   +N L +G CK+        L++ M ++N  PDK  Y+TL++G ++  
Sbjct: 494 KMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNE 553

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            +  A  IF+ M + G   D    N++++G C     +  ++ +A +    M K   + D
Sbjct: 554 SLDEARKIFEFMEQKGIHPDVVGYNAMIKGYC-----QFGMMNEAVECMSTMRKVGRIPD 608

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  +I    K      AL  L   ++    P  + ++++I   C  G  D A  L  
Sbjct: 609 EFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFG 668

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            M      P+  +Y +LI  L + +K   A A+Y
Sbjct: 669 SMESQGLFPNVITYTILIGSLFKKDKVVRA-AMY 701



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 163/329 (49%), Gaps = 5/329 (1%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           F+ L+  L      + A +   E + + L PN  +++ +I  +C + +   A  ++  M 
Sbjct: 402 FSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMM 461

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           + G+ P+V TF  L++ L  +G++ EAL V ++M      P+   YN L+ GLC    + 
Sbjct: 462 ERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLP 521

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
            A  ++  +    + PD Y YT ++DGF +    +EA ++     ++G+ P+VV +N + 
Sbjct: 522 AARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMI 581

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            GYC+ G   + V  +  M+K   +PD+ +Y+TL+ G  K G I  A+S+  +M++   +
Sbjct: 582 KGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQ 641

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
            +    +SL+ G C     + D  E    +F  M  +    +  TY I+I +L K  K  
Sbjct: 642 PNVVAYSSLINGYC--KLGDTDAAE---CLFGSMESQGLFPNVITYTILIGSLFKKDKVV 696

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALC 416
            A ++  + +     P   T ++++  LC
Sbjct: 697 RAAMYFEYMLLNQCSPNDYTLHSLVTGLC 725



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 181/397 (45%), Gaps = 19/397 (4%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G    V  F  L+  LV+  +   A+    + ++  L P++  ++++I   C K     A
Sbjct: 464 GHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAA 523

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
           R +I+ M +   HP+   +T L++   ++  L EA ++ + M + G  P++  YN ++KG
Sbjct: 524 RNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKG 583

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C  G + EA E +  ++  G  PD +TYT ++ G+ K G  + A+ LL + ++R   PN
Sbjct: 584 YCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPN 643

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           VV +++L NGYCK G       L   M+ +   P+ I+Y+ L+  L K  K+  A   F+
Sbjct: 644 VVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFE 703

Query: 320 EMVRFGFEVDERMMNSLLRGLC--MKS-----------WEEKDLLEDAYQVFEKMTKKVS 366
            M+      ++  ++SL+ GLC  M S              K  L D   +F  +     
Sbjct: 704 YMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLD---IFRALVNDRC 760

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                 Y  +I +L       EAL   +     G+ P + TF +++   C  GK  +   
Sbjct: 761 DPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRT 820

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           +L   ++  ++   + Y +L    DQ       C +Y
Sbjct: 821 ILPNEFQRDELEVASRYKIL---FDQYVVKSVGCEVY 854



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 164/372 (44%), Gaps = 5/372 (1%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           + A K + E  +     + ++  +M+R  C +    +  K+I+  +  G  PN   + +L
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++  C+ G +   + +L +M   G  P + TY  L+  L   G +E+   +L  ++   L
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P+V  Y +V+D  CK   +++A+ +L +    G  P+ +TF+TL +G C+EG   +   
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           LL+   +    P+  SY++L++G    G++  A ++  EM+  G   D     +L+ GL 
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
           +     + LL     V EKM  +  + D   Y ++I  L K K    A   +   +E   
Sbjct: 481 VAGQVSEALL-----VREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNV 535

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
            P    +  +I        +D+A  +   M +    P    Y+ +I    Q     +A  
Sbjct: 536 HPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVE 595

Query: 462 LYGAALKQGVIP 473
                 K G IP
Sbjct: 596 CMSTMRKVGRIP 607



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/302 (21%), Positives = 118/302 (39%), Gaps = 30/302 (9%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+   L E   IF+ +++ G +  V  +N ++           AV+  S     G  P+ 
Sbjct: 550 IRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDE 609

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T++ +I  Y  + +   A  ++  M      PNV  ++ L+N  CK G    A  +   
Sbjct: 610 FTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGS 669

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  PN+ TY  L+  L    +V  A      +  +   P+ YT  +++ G C    
Sbjct: 670 MESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCN--- 726

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL----KLMKKRNCLPDKI 296
                                +  ++ + +C     + G G L    + +    C P   
Sbjct: 727 ---------------------SMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNS 765

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSWEEKDLLEDA 354
           +Y+ ++  L     +  A+ +  +M   G++ D     SLL G C   KS E + +L + 
Sbjct: 766 AYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNE 825

Query: 355 YQ 356
           +Q
Sbjct: 826 FQ 827


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 190/408 (46%), Gaps = 7/408 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  + + G +   + +  LLM      +     K FS+  S  + P+   FS M+  +
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
               +  +A    + + + G  P+   +TIL+   C+ G +  A+ + ++M + GC  ++
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN +L GLC    + EA ++   +    L PD YT T ++DG CK+G    AMEL  +
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             E+ +  +VVT+NTL +G+ K G       +   M  +  LP  ISYS L+N L   G 
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A  ++ EM+    +    + NS+++G C           D     EKM  +  V D 
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS-----DGESFLEKMISEGFVPDC 620

Query: 371 GTYGIVIRTLGKGKKTDEA--LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            +Y  +I    + +   +A  L+      + G +P   T+N+++   C + ++ +A ++L
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
             M E    P R++Y  +I      +   +A  ++   L++G  P  K
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 188/390 (48%), Gaps = 5/390 (1%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           ++A  L+E  + F  ++  G   S+   N L+ +LV +   E A   + E S  G+  N 
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
           +T +IM+   C      +    +  + + G +P++ T+  L+++    G ++EA E+++ 
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M   G  P + TYN ++ GLC  G+ E A E+   +   GL PD  TY +++   CK G 
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
             E  ++ ++   R V P++V F+++ + + + G   K +     +K+   +PD + Y+ 
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+ G  + G I  A+++  EM++ G  +D    N++L GLC     ++ +L +A ++F +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC-----KRKMLGEADKLFNE 470

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           MT++    D  T  I+I    K      A+       E       +T+N ++      G 
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           ID A  +   M     +P+  SY +L+  L
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNAL 560



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 157/331 (47%), Gaps = 6/331 (1%)

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
           +D  F N    N + F +L+ +  ++ +L+EA E    +   G   +I   N L+  L  
Sbjct: 154 LDSTFSN-CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVR 212

Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
           +G VE A+ +   +   G+  +VYT   +++  CK G+  +    L++  E+GV P++VT
Sbjct: 213 IGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVT 272

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           +NTL + Y  +G   +   L+  M  +   P   +Y+T++NGL K GK   A  +F EM+
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
           R G   D     SLL   C K     D++E   +VF  M  +  V D   +  ++    +
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKG----DVVETE-KVFSDMRSRDVVPDLVCFSSMMSLFTR 387

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
               D+AL++ +   E G IP  + +  +IQ  C +G I  A+ L   M +        +
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           Y+ ++  L + +   +A  L+    ++ + P
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFP 478



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 147/347 (42%), Gaps = 5/347 (1%)

Query: 117 APNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE 176
             N   F ++IR Y       EA +    +   G+  ++     L+ SL + G ++ A  
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221

Query: 177 VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC 236
           V  ++ R G   N+ T N ++  LC  G++E+    L  V+  G+ PD+ TY  ++  + 
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281

Query: 237 KVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
             G   EA EL+N    +G +P V T+NT+ NG CK G   +   +   M +    PD  
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +Y +LL    K G +     +F +M       D    +S+     M  +     L+ A  
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM-----MSLFTRSGNLDKALM 396

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
            F  + +   + D   Y I+I+   +      A+   +  ++ G     +T+N ++  LC
Sbjct: 397 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456

Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
               + +A  L   M E A  P   +  +LI    +L    +A  L+
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 114/235 (48%), Gaps = 2/235 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+  +++F  +K+      V  +N LL     + + +TA + +++  S  + P   
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           ++SI++   C+K    EA +V D M      P V     ++   C+SG   +    L++M
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML--MNVKNDGLKPDVYTYTAVMDGFCKVG 239
              G  P+  +YN L+ G      + +A+ ++  M  +  GL PDV+TY +++ GFC+  
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671

Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           +  EA  +L + IERGV P+  T+  + NG+  +    +   +   M +R   PD
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726


>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
 gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
          Length = 523

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 156/300 (52%), Gaps = 5/300 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A+   + I  FD + + G   SV D + LL  L      + A +FF     +     + 
Sbjct: 160 RANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVK-HKFEAKAK 218

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI++R + +  +  EARKV D M   G   +V  +  L+ +LCK G + EA ++  ++
Sbjct: 219 TYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREI 278

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           G  G +P+  +Y   ++  C    +   + +L  +K   L P+V+TY  ++   CK G+ 
Sbjct: 279 GSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKV 338

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A +LL+E +ERGV+P+  ++NT+   +C+     +   L+ +M K NCLPD+ SY+ L
Sbjct: 339 EDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNML 398

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L  L++ G+   A  I++ M   GF       + ++ GLC K    K  LE+A + FE M
Sbjct: 399 LKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKK----KGKLEEACRYFETM 454



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/321 (21%), Positives = 144/321 (44%), Gaps = 7/321 (2%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N     ++  S  ++    +A+   D+M   G +P++   + LL  LC    V+ A +  
Sbjct: 147 NQEIIWLVFRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFF 206

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             VK+   +    TY+ ++ G+  +G + EA ++ +E   RG   +V+ +N+L    CK 
Sbjct: 207 DRVKHK-FEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKG 265

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +   + + +      PD  SY+  +    +   I    S+   M R+    +    
Sbjct: 266 GNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTY 325

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           N +++ LC     +   +EDAYQ+  +M ++    D  +Y  ++    +  + + A   +
Sbjct: 326 NCIIKKLC-----KNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLI 380

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
              ++   +P   ++N +++ L   G+ D+A  +   M E    PS ++Y ++I  L + 
Sbjct: 381 SIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKK 440

Query: 454 E-KSYDACALYGAALKQGVIP 473
           + K  +AC  +   + +G+ P
Sbjct: 441 KGKLEEACRYFETMIDEGIPP 461



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 99/248 (39%), Gaps = 12/248 (4%)

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           V   + +    ++A+   +   E G+ P+V   + L    CK             +K + 
Sbjct: 154 VFRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKF 213

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVS---IFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
               K +YS L+ G   WG I  AV    +F EM   G  +D    NSLL  LC     +
Sbjct: 214 EAKAK-TYSILVRG---WGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALC-----K 264

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
              +++AY++F ++       D  +Y I IR   +          L        +P   T
Sbjct: 265 GGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFT 324

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
           +N +I+ LC  GK++ A  LL  M E    P   SY+ ++    +  +   A  L    +
Sbjct: 325 YNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMV 384

Query: 468 KQGVIPQR 475
           K   +P R
Sbjct: 385 KDNCLPDR 392


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 201/407 (49%), Gaps = 31/407 (7%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG--LAPNSWTFSIMIRC 129
           +FD + + G    V  +N LL  L   N  + A++     +  G    P+  ++S +I  
Sbjct: 39  VFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +  + D       +D M D    PNV T+  ++ +LCK+  + +A+EVL  M + G  P+
Sbjct: 98  FFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN ++ G C  G+ +EA   L  +++DG++PDV TY ++MD  CK GR  EA ++ +
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 210

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
              +RG+ P++ T+ TL  GY  +G  ++  GLL LM +    P+   +S L+    K  
Sbjct: 211 SMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 270

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           K+  A+ +F +M + G   +     +++  LC     +   +EDA   FE+M  +    D
Sbjct: 271 KVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLC-----KSGRVEDAMLYFEQMIDEGLRPD 325

Query: 370 PGTYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
              Y  +I +L    K +K +E  + +   ++ G    TI FN++I + C EG++ ++  
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEM---LDRGICLSTIFFNSIIDSHCKEGRVIESGK 382

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L  LM      P       +IT    L ++ +A  L+ A    G++P
Sbjct: 383 LFDLMVRIGVKPD------IIT----LGRNDEAKDLFVAFSSNGLVP 419



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 15/314 (4%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE I     ++ DG    V  +N L+  L        A K F   +  GL P+  T+  +
Sbjct: 168 KEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTL 227

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           ++ Y  K    E   ++D M  NG HPN   F+ILV +  K  +++EA+ V  +M + G 
Sbjct: 228 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL 287

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN  TY  ++  LC  GRVE+A      + ++GL+PD   Y +++   C   +  +A E
Sbjct: 288 NPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEE 347

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L  E ++RG+  + + FN++ + +CKEG  ++   L  LM +    PD I+         
Sbjct: 348 LFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT--------- 398

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             G+   A  +F       F  +  + N     L  ++   + LLE+  Q+F  M     
Sbjct: 399 -LGRNDEAKDLF-----VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 452

Query: 367 VTDPGTYGIVIRTL 380
             D G    ++R L
Sbjct: 453 TVDSGMLNFIVREL 466



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 25/268 (9%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           IFDS+ K G    ++ +  LL                      G+ PN + FSI++  Y 
Sbjct: 208 IFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 267

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    EA  V   M   G +PN  T+  +++ LCKSGR+++A+   +QM   G +P+  
Sbjct: 268 KQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSI 327

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK-------------- 237
            YN L+  LC   + E+A E+ + + + G+      + +++D  CK              
Sbjct: 328 VYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387

Query: 238 -----------VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
                      +GR++EA +L       G+ PN  T+  +      +G   +   L   M
Sbjct: 388 VRIGVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 447

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           +   C  D    + ++  LL+ G+I  A
Sbjct: 448 EDNGCTVDSGMLNFIVRELLQRGEITRA 475



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 115/249 (46%), Gaps = 11/249 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E + +F  +++ G N +   +  ++  L      E A+ +F +    GL P+S 
Sbjct: 268 KQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSI 327

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C  + + +A ++   M D G   +   F  +++S CK GR+ E+ ++ D M
Sbjct: 328 VYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            RIG KP+I T          +GR +EA ++ +   ++GL P+ +TY  + +     G  
Sbjct: 388 VRIGVKPDIIT----------LGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 437

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            E  +L     + G T +    N +     + G   +    L ++ +++    + S ++L
Sbjct: 438 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH-FSLEASTASL 496

Query: 302 LNGLLKWGK 310
              LL  GK
Sbjct: 497 FIDLLSGGK 505



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/188 (19%), Positives = 77/188 (40%), Gaps = 26/188 (13%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           NP ++     +D + K+  +++ +  F+ +  +G       +N L+ +L + ++ E A +
Sbjct: 288 NPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEE 347

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF------------------- 147
            F E    G+  ++  F+ +I  +C +    E+ K+ D M                    
Sbjct: 348 LFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRNDEAKD 407

Query: 148 ------DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
                  NG  PN  T+ ++  ++   G L+E  ++   M   GC  +    N +++ L 
Sbjct: 408 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 467

Query: 202 YVGRVEEA 209
             G +  A
Sbjct: 468 QRGEITRA 475


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 189/393 (48%), Gaps = 24/393 (6%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM---FDNGY-HPNVTT 157
           + A +      + GLAPN  TF+  I   C      EA ++ + M   ++ G   P+  T
Sbjct: 222 DEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVT 281

Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
           F ++++  C +G + EA  ++D M   G    +++YN  L GL   GRV EA E+L  + 
Sbjct: 282 FDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMA 341

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV-TPNVVTFNTLFNGYCKEGTP 276
           ++G++P+ YTY  ++DG CK G++ + +  + + +  GV TP+VVT+ +L + YC +G  
Sbjct: 342 HEGVQPNSYTYNIIVDGLCKEGKAFD-VRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNT 400

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
                +L  M ++ C P+  +Y+ LL  LLK G+      + + M   G+ +D    N +
Sbjct: 401 TAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNII 460

Query: 337 LRGLCMKS------------WEEKDL----LEDAYQ--VFEKMTKKVSVTDPGTYGIVIR 378
           + GLC  S            W E  L    L +++   V +    K  + D  TY  ++ 
Sbjct: 461 IDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMN 520

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L K  + DEA   L   I     P ++ ++  I   C  GK   A+ +L  M + +  P
Sbjct: 521 ALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNP 580

Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           S  SY++LI    + +KS +   L     ++G+
Sbjct: 581 STRSYNLLIWGFQEKQKSDEILKLMSEMKEKGI 613



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 181/408 (44%), Gaps = 63/408 (15%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  + E   + D ++  G    V  +N  L  LV       A +  SE +  G+ PNS+T
Sbjct: 292 AGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYT 351

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I++   C +   F+ R+V D +      P+V T+T L+++ C  G    A  +LD+M 
Sbjct: 352 YNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMA 411

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           + GC PN+ TYN LL+ L   GR  E   +L  +   G   D  +   ++DG C+  +  
Sbjct: 412 QKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLE 471

Query: 243 EAMELL-----------------------NEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
            AM+++                       + +I +   P+ +T++TL N  CKEG   + 
Sbjct: 472 MAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEA 531

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
              L  M  ++  PD + Y T ++G    GK   A+ + ++M       ++R  N   R 
Sbjct: 532 KKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDM-------EKRSCNPSTR- 583

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
                                           +Y ++I    + +K+DE L  +    E 
Sbjct: 584 --------------------------------SYNLLIWGFQEKQKSDEILKLMSEMKEK 611

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           G     +T+N++I++ CG G ++KA+ LL  M ++  +P+ TS+ +LI
Sbjct: 612 GISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLI 659



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 182/413 (44%), Gaps = 47/413 (11%)

Query: 65  PLKERIDIFDSIKK-DGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
           PL   +  F S++   G       +N LL+A +  +  +     + +    G  P+ +T 
Sbjct: 87  PLAFSLSAFRSLRALGGAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTR 146

Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT--ILVNSLCKSGRLKEALEVLDQM 181
           + ++           AR+V D M      P    F+  IL    C++GR  +AL VLD M
Sbjct: 147 NALLEALSAAGRMDLARRVFDAM------PARNEFSSGILARGYCRAGRSADALAVLDAM 200

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +    N+   N ++ G C  GRV+EA  ++  ++  GL P+V T+   +   CK GR 
Sbjct: 201 PEM----NLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRV 256

Query: 242 NEAMELLN---EAIERGVT-PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
            EA  + N   EA E+G+  P+ VTF+ + +G+C  G   +   L+ +M+    L    S
Sbjct: 257 LEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVES 316

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC---------------- 341
           Y+  L+GL+K G++  A  +  EM   G + +    N ++ GLC                
Sbjct: 317 YNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVR 376

Query: 342 --------------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
                         + ++  K     A ++ ++M +K    +  TY +++++L K  +T 
Sbjct: 377 SGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTT 436

Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
           E    L    E G+   T + N +I  LC   K++ A+ ++  M+   ++  R
Sbjct: 437 EVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALR 489



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 8/289 (2%)

Query: 105 VKFFSEAS-SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           V   S++S S    P+  T+S ++   C +  F EA+K +  M      P+   +   ++
Sbjct: 496 VSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIH 555

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             C  G+   A++VL  M +  C P+ ++YN L+ G     + +E  +++  +K  G+  
Sbjct: 556 GYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISS 615

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V TY +++  FC  G  N+AM LL+E ++  + PNV +F  L   +CK         + 
Sbjct: 616 NVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVF 675

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            +     C   ++ Y  +   L  + +   A +I +  +     +       ++ GLC  
Sbjct: 676 DVALS-TCGQKEVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDV 734

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK-GKKTDEALI 391
           S  E D    A+ + +    K    DP T+  VI  L + GKK D  ++
Sbjct: 735 S--EAD---HAHSLLKLFIAKGYSFDPATFMPVIDALSESGKKHDADML 778



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 1/205 (0%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I +   ++K   N S   +N L+       + +  +K  SE    G++ N  T++ +I+ 
Sbjct: 567 IKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKS 626

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C +    +A  ++D M  N   PNVT+F +L+ + CK+     A  V D +    C   
Sbjct: 627 FCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFD-VALSTCGQK 685

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
              Y  +   L    R  EA  +L       +    + Y  ++ G C V  ++ A  LL 
Sbjct: 686 EVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLK 745

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEG 274
             I +G + +  TF  + +   + G
Sbjct: 746 LFIAKGYSFDPATFMPVIDALSESG 770



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/330 (20%), Positives = 127/330 (38%), Gaps = 26/330 (7%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+ AL      + A K   E     ++P+S  +   I  YC       A KV+  M 
Sbjct: 515 YSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDME 574

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
               +P+  ++ +L+    +  +  E L+++ +M   G   N+ TYN L+K  C  G V 
Sbjct: 575 KRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVN 634

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +A  +L  +  + + P+V ++  ++  FCK    + A  + + A+       V+      
Sbjct: 635 KAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVALSTCGQKEVL------ 688

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKIS---------YSTLLNGLLKWGKIRPAVSIF 318
             YC   T +      + ++ +N L   +          Y  ++ GL    +   A S+ 
Sbjct: 689 --YCLMCTELSTYA--RWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLL 744

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD--PGTYGIV 376
           K  +  G+  D      ++  L      E     DA  + EKM +     D      G+V
Sbjct: 745 KLFIAKGYSFDPATFMPVIDAL-----SESGKKHDADMLSEKMMEIADCNDGQSAVSGVV 799

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
                K ++   A    H  +      RTI
Sbjct: 800 TPRSRKHEQDKYAESDWHALLHRDDSARTI 829



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 6/185 (3%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E + +   +K+ G + +V  +N L+ +         A+    E     + PN  +F ++I
Sbjct: 600 EILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLI 659

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
           + +C   DF  A++V D          V  + ++   L    R  EA  +L+    +  +
Sbjct: 660 KAFCKTADFSAAQRVFDVALSTCGQKEV-LYCLMCTELSTYARWIEAKNILETA--LEMR 716

Query: 188 PNIQT--YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +IQ+  Y  ++ GLC V   + A+ +L      G   D  T+  V+D   + G+ ++A 
Sbjct: 717 ISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSESGKKHDA- 775

Query: 246 ELLNE 250
           ++L+E
Sbjct: 776 DMLSE 780



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/291 (21%), Positives = 110/291 (37%), Gaps = 48/291 (16%)

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G  P    YN LL       R++    +  ++   G  PDV+T  A+++     GR    
Sbjct: 103 GAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGR---- 158

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
           M+L     +     N  +   L  GYC+ G     + +L  M + N     +  +T++ G
Sbjct: 159 MDLARRVFDAMPARNEFSSGILARGYCRAGRSADALAVLDAMPEMNL----VVCNTVVAG 214

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             + G++  A  +   M   G   +    N  +  LC    +   +LE AY++F  M   
Sbjct: 215 FCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALC----KAGRVLE-AYRIFNDM--- 266

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR--TITFNNVIQALCGEGKID 422
                                          A E G +PR   +TF+ ++   C  G +D
Sbjct: 267 -----------------------------QEAWEQG-LPRPDQVTFDVMLSGFCDAGMVD 296

Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +A +L+ +M     +    SY+  ++ L +  +  +A  L      +GV P
Sbjct: 297 EATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQP 347


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 195/402 (48%), Gaps = 8/402 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + +S++KD T      FN L+      N  E A++  +  +  G  P ++T+S MI+ + 
Sbjct: 17  LVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFM 76

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              D      +   M    + P+ TTF IL++SL K+ +++EA  V   M ++   P++ 
Sbjct: 77  KGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVY 136

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L++ L  +GR++   ++  ++   G +P+++TY +VM  F   GR +EA ++  + 
Sbjct: 137 TYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQM 196

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           +++G+ P+ VT+N L + + K G   +       + K     ++++Y++LL+ L + G I
Sbjct: 197 VQKGLQPDAVTYNILIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLSSLGRKGDI 253

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           +  + +F +M   G   +E     L+  L    W  +  +ED +Q++ +M       D  
Sbjct: 254 QGLMELFGQMKAKGLVSNELTYAILIERL---GWAGR--VEDVWQLYLEMVDNDIKYDIV 308

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           T   V+  L K  + + A          G    T+T+N +I  L   GK+D A  LL  M
Sbjct: 309 TINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEM 368

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            E+   P+  +Y+ LI+   +      A  L+    ++GV P
Sbjct: 369 EENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAP 410



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 193/412 (46%), Gaps = 8/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A+ +++ +    +  K+G   +   ++ ++   +   + +  +  + +       P+  
Sbjct: 42  EANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHT 101

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+I+I      +   EA  V   MF     P+V T+TIL+ SL   GR+   +++ + M
Sbjct: 102 TFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESM 161

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              GC+PN+ TY+ ++      GRV+EA ++   +   GL+PD  TY  ++D F K G+ 
Sbjct: 162 TAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQL 221

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A + + ++  R  T N VT+N+L +   ++G     + L   MK +  + ++++Y+ L
Sbjct: 222 ERAFDFVGKS--RSFT-NEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAIL 278

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  L   G++     ++ EMV    + D   +N++L  L      +   +E A+++F+ M
Sbjct: 279 IERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCL-----SKAGRVEAAFELFQDM 333

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K    D  TY I+I  LG+  K D A   L    E G  P  IT+N +I +      +
Sbjct: 334 KFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNL 393

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             A  L   M E    P+  SY  LI    +  ++  A +L+     +G  P
Sbjct: 394 SAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPP 445



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 161/396 (40%), Gaps = 72/396 (18%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++E  ++F  + K   +  V  +  L+ +L  +   +  +K F   ++ G  PN +
Sbjct: 112 KADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLF 171

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA------- 174
           T+  ++  + +     EA  +   M   G  P+  T+ IL+++  K+G+L+ A       
Sbjct: 172 TYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKS 231

Query: 175 -------------------------LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
                                    +E+  QM   G   N  TY  L++ L + GRVE+ 
Sbjct: 232 RSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDV 291

Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
           +++ + + ++ +K D+ T   V+D   K GR   A EL  +   +G+  + VT+N L NG
Sbjct: 292 WQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILING 351

Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
             + G       LL  M++  C P+ I+Y+TL++   KW  +  A  +F EM        
Sbjct: 352 LGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKE------ 405

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
                   RG+                            +  +Y  +I   GK  +TD A
Sbjct: 406 --------RGVA--------------------------PNVVSYSSLIEGFGKAGRTDAA 431

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           +         G  P  +T+N +I  L   G+   A+
Sbjct: 432 ISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAM 467



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 131/299 (43%), Gaps = 8/299 (2%)

Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
           L  + R  +   +++ M +   K + Q +N L+        +E+A + L     +G +P 
Sbjct: 5   LGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPT 64

Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
            YTY++++  F K G     + +  + ++    P+  TFN L +   K     +   +  
Sbjct: 65  AYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFG 124

Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
            M K N  PD  +Y+ L+  L   G+I   + +F+ M   G + +    +S+     M +
Sbjct: 125 DMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSV-----MHA 179

Query: 345 WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPR 404
           +     +++A  +F++M +K    D  TY I+I   GK  + + A   +  +        
Sbjct: 180 FGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKS---RSFTN 236

Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            +T+N+++ +L  +G I   + L   M     + +  +Y +LI +L    +  D   LY
Sbjct: 237 EVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLY 295



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 74/159 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  ++   ++F  +K  G N     +N L+  L    + + A     E    G APN  
Sbjct: 319 KAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNII 378

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  Y   ++   A ++   M + G  PNV +++ L+    K+GR   A+ +  +M
Sbjct: 379 TYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREM 438

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
              GC PN  TYN L+  L   GR   A E L  +++ G
Sbjct: 439 KAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAG 477


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 197/412 (47%), Gaps = 6/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L     +   + K+G   + + ++ L+  L    +  + ++   E +  G+A N++
Sbjct: 420 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 479

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +C      EA ++ D M D+   PN  TF +++   C  G +++A ++ DQM
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G KP+  TY  L+ GLC    V +A E + +++N     + ++ TA++ GF + GR 
Sbjct: 540 VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRF 599

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            E   L +E   RGV  ++V+F  +     K+    K   L + MK++   PD I Y+ +
Sbjct: 600 TETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCM 659

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K   +  A++ + +MV  G+  +      L+  LC   +     L  A  + ++M
Sbjct: 660 IDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY-----LGSAELLCKEM 714

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                + +  TY   +         ++A   LH A+  GH+   ++FN +I+ LC  GKI
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEKAK-DLHSAMLQGHLASIVSFNILIKGLCKAGKI 773

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +A+ L+  + E    P   SY  +I +L ++     A  L+   L +G+ P
Sbjct: 774 QEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKP 825



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 170/379 (44%), Gaps = 30/379 (7%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A     +    G+ PN + ++ +I   C    F +A ++   M   G  PN  T+ IL
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +++LCK G +++AL + D+M   G K  +  YN L+ G C  G ++ A  +L  +  +GL
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P   +Y+ ++ G C+ G  +  MEL  E  ERG+  N  TF  L NG+CK+    +   
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L   M   N +P++++++ ++ G    G IR A  ++ +MV  G + D     SL+ GLC
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559

Query: 342 MKSWEEK------DL------------------------LEDAYQVFEKMTKKVSVTDPG 371
           + S   K      DL                          + Y ++++M  +    D  
Sbjct: 560 LTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLV 619

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           ++ I++    K    +++ +      E G  P  I +  +I AL  E  + +AL     M
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 679

Query: 432 YEHAKIPSRTSYDMLITKL 450
                 P+  ++ +LI  L
Sbjct: 680 VVDGYSPNTVTHTVLINNL 698



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 164/349 (46%), Gaps = 5/349 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++ +G   S   +N L+  L      + AV+  +   + G+  +  T+  ++  +C   +
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
              A ++   M   G+ P+    + +++ L K   ++EA  +  ++G +G  PN+  YN 
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+  LC   R ++A  +   +   GL+P+  TY  ++   CK G   +A+ L ++  ++G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           +   V  +N+L NGYCK+G+  +  GLL  M K    P   SYS L+ GL + G +   +
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            + +EM   G   +     +L+ G C     +   +++A ++F+KM     + +  T+ +
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFC-----KDKKMDEAARLFDKMIDSNVIPNEVTFNV 518

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +I          +A       +EMG  P   T+ ++I  LC    + KA
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 168/397 (42%), Gaps = 40/397 (10%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           + +L +LV + +   A   F +    G+  + + ++  IR YC   +   AR ++  M  
Sbjct: 167 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR--- 205
            G   +   + +L+  LCK+ R++EA+EV + M  IG   +  TY  L+ G C +     
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286

Query: 206 --------------------------------VEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
                                           VEEA+ +   + + G+ P+V+ Y A++D
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             CK  R ++A  L  E   RG+ PN VT+  L +  CK G     + L   M+ +    
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 406

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
               Y++L+NG  K G +  A  +   MV+ G        + L+ GLC         L  
Sbjct: 407 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC-----RNGDLSS 461

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
             ++  +M ++    +  T+  +I    K KK DEA       I+   IP  +TFN +I+
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             C  G I KA  L   M E    P   +Y  LI+ L
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 184/419 (43%), Gaps = 38/419 (9%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +N L+  L      + A + F E +  GL PN  T++I+I   C +    +A  + 
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M D G    V  +  L+N  CK G L  A  +L  M + G  P   +Y+ L+ GLC  
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G +    E+   +   G+  + YT+TA+++GFCK  + +EA  L ++ I+  V PN VTF
Sbjct: 457 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N +  GYC  G   K   L   M +    PD  +Y +L++GL     +  A     ++  
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576

Query: 324 FGFEVDERMMNSLLRGLCMKS--------WEEK-------DLL---------------ED 353
               ++   + +LL G   +         W+E        DL+               E 
Sbjct: 577 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           +  +F +M ++    D   Y  +I  L K +   +AL      +  G+ P T+T   +I 
Sbjct: 637 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN 696

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSY----DMLITKLDQLEKSYDACALYGAALK 468
            LC  G +  A LL   M     +P++ +Y    D   T+ D +EK+ D   L+ A L+
Sbjct: 697 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGD-MEKAKD---LHSAMLQ 751



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 1/275 (0%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   ++D +   G    +  F  ++ A +  +++E +   F E    G+ P+   ++ MI
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                + +  +A    D M  +GY PN  T T+L+N+LCKSG L  A  +  +M      
Sbjct: 661 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  TYNC L      G +E+A + L +    G    + ++  ++ G CK G+  EA++L
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDL 779

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           +++  E G +P+ ++++T+ +  CK G   K   L   M  +   PD ++Y+  +     
Sbjct: 780 MSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 839

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
            G+   A+ I+  M+R G + +     +LL G+ +
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 165/396 (41%), Gaps = 40/396 (10%)

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
           S G+  N +T S ++        F  AR + D M  +G H +   +T  + + C+S  L 
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
            A  ++ +M   G K +   YN L+ GLC   RV+EA E+   + N G+  D  TY  ++
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 233 DGFCKVGRSNEAM----------------------------ELLNEAI-------ERGVT 257
            GFC++     A+                            EL+ EA        + G+ 
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PNV  +N L +  CK         L K M  R   P++++Y+ L++ L K G I  A+ +
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F +M   G +V     NSL+ G C     ++  L+ A  +   M K+       +Y  +I
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYC-----KQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L +       +       E G      TF  +I   C + K+D+A  L   M +   I
Sbjct: 451 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 510

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P+  +++++I     +     A  LY   ++ G+ P
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKP 546



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/419 (21%), Positives = 162/419 (38%), Gaps = 74/419 (17%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   +++   + + G  W+   F  L+       + + A + F +     + PN  TF++
Sbjct: 459 LSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 518

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC------------------- 166
           MI  YC   +  +A ++ D M + G  P+  T+  L++ LC                   
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 578

Query: 167 ----------------KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
                           + GR  E   + D+M   G K ++ ++  ++         E++ 
Sbjct: 579 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 638

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +K  G+KPD   YT ++D   K     +A+   ++ +  G +PN VT   L N  
Sbjct: 639 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNL 698

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDK----------------------------------I 296
           CK G       L K M   N LP+K                                  +
Sbjct: 699 CKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIV 758

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           S++ L+ GL K GKI+ A+ +  ++   GF  D    ++++  LC     +   +  A++
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELC-----KMGDINKAFE 813

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++ +M  K    D   Y I IR      ++D+AL    + I  G  P   T+  ++  +
Sbjct: 814 LWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 5/309 (1%)

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V+     +G   N  T + ++ SL K  +   A ++ D+M + G   +   Y   ++  C
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
               ++ A  +++ ++++G+K     Y  +M G CK  R  EA+E+ N  +  GVT + V
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+ TL  G+C+       + +   M +   +P + + S +++ L K   +  A S+  ++
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G   +    N+L+  LC     + +  +DA ++F++M  +    +  TY I+I  L 
Sbjct: 330 GDLGMVPNVFAYNALIDKLC-----KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K    ++AL       + G       +N++I   C +G +D+A  LL  M +    P+  
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444

Query: 442 SYDMLITKL 450
           SY  LI  L
Sbjct: 445 SYSPLIAGL 453



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 68/169 (40%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDL 91
             +A L   E L     P       F+D        E+     S    G   S+  FN L
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNIL 763

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           +  L    + + A+   S+ +  G +P+  ++S +I   C   D  +A ++ + M   G 
Sbjct: 764 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
            P+V  + I +      G   +AL +   M R G +PN  TY  LL G+
Sbjct: 824 KPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 182/377 (48%), Gaps = 12/377 (3%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L      + AV    E    G  PN   F+++I   C K D   A K++D MF
Sbjct: 213 YSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMF 272

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PN  T+  LV+ LC  G+L +A+ +L++M    C PN  T+  L+ G    GR  
Sbjct: 273 LKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRAL 332

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +   +L++++  G + + ++Y++++ G  K G+    M+L  E +E+G  PN + ++ L 
Sbjct: 333 DGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALI 392

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G C+EG P +    L  MK +   P+  +YS+L+ G  + G I  A+ ++KEM      
Sbjct: 393 DGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCN 452

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
             E   + L+ GLC     +   L++A  V+++M  +    D   Y  +I      +  +
Sbjct: 453 HHEVCYSILINGLC-----KNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVE 507

Query: 388 EALIHLHHAIEMGHIPR----TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           + +   +    + H P+     +T+N ++ A C +  + +A+ +L  M +    P   + 
Sbjct: 508 QGMKLFNQM--LCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITC 565

Query: 444 DMLITKL-DQLEKSYDA 459
           D+ +  L D ++   D 
Sbjct: 566 DIFLKTLRDNMDPPQDG 582



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 190/403 (47%), Gaps = 12/403 (2%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           F +I+ +G +     FN ++ AL  +   + AV+ F   S      + +T+S ++   CN
Sbjct: 168 FSNIQPNGLS-----FNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCN 222

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           +    EA  ++D M   G  PN   F +L+++LCK G L  A +++D M   GC PN  T
Sbjct: 223 EGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVT 282

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           YN L+ GLC  G++++A  +L  +  +   P+  T+  ++DGF K GR+ + + +L    
Sbjct: 283 YNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLE 342

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           E+G   N  ++++L +G  KEG    G+ L K M ++ C P+ I YS L++GL + GK  
Sbjct: 343 EKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPD 402

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
            A     EM   G   +    +SL+ G     + E   +  A  V+++MT          
Sbjct: 403 EAKEYLIEMKNKGHTPNSFTYSSLMWG-----YFEAGDIHKAILVWKEMTDNDCNHHEVC 457

Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
           Y I+I  L K  K  EALI     +  G     + ++++I   C    +++ + L   M 
Sbjct: 458 YSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQML 517

Query: 433 EHAK--IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            H     P   +Y++L+           A  +    L QG  P
Sbjct: 518 CHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDP 560



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 170/352 (48%), Gaps = 7/352 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + E + + D ++ +GT  +   FN L+ AL    +   A K        G  PN  T++ 
Sbjct: 226 IDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNS 285

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C K    +A  +++ M  N   PN  TF  LV+   K GR  + + VL  +   G
Sbjct: 286 LVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKG 345

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            + N  +Y+ L+ GL   G+ E   ++   +   G KP+   Y+A++DG C+ G+ +EA 
Sbjct: 346 YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAK 405

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           E L E   +G TPN  T+++L  GY + G   K + + K M   +C   ++ YS L+NGL
Sbjct: 406 EYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGL 465

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K GK++ A+ ++K+M+  G ++D    +S++ G C        L+E   ++F +M    
Sbjct: 466 CKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFC-----NAQLVEQGMKLFNQMLCHN 520

Query: 366 SVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
               P   TY I++           A+  L+  ++ G  P  IT +  ++ L
Sbjct: 521 PKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 572



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 166/330 (50%), Gaps = 5/330 (1%)

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           VID    +   PN  +F +++ +LC+ G + +A+EV   M    C  +  TY+ L+ GLC
Sbjct: 162 VIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLC 221

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
             GR++EA  +L  ++ +G  P+   +  ++   CK G  + A +L++    +G  PN V
Sbjct: 222 NEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEV 281

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+N+L +G C +G   K + LL  M    C+P+ I++ TL++G +K G+    V +   +
Sbjct: 282 TYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSL 341

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G+  +E   +SL+ GL  +   E  +     Q++++M +K    +   Y  +I  L 
Sbjct: 342 EEKGYRGNEFSYSSLISGLFKEGKGEHGM-----QLWKEMVEKGCKPNTIVYSALIDGLC 396

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           +  K DEA  +L      GH P + T+++++      G I KA+L+   M ++       
Sbjct: 397 REGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEV 456

Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGV 471
            Y +LI  L +  K  +A  ++   L +G+
Sbjct: 457 CYSILINGLCKNGKLKEALIVWKQMLSRGI 486



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 147/297 (49%), Gaps = 9/297 (3%)

Query: 155 VTTFTILVNSLCKSGRLKEALE----VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           V +F  ++N + + G    ALE    V+D       +PN  ++N ++K LC VG V++A 
Sbjct: 136 VKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAV 195

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E+   + +     D YTY+ +M G C  GR +EA+ LL+E    G  PN V FN L +  
Sbjct: 196 EVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISAL 255

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK+G   +   L+  M  + C+P++++Y++L++GL   GK+  A+S+   MV      ++
Sbjct: 256 CKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMV-----ANK 310

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
            + N +  G  +  + +     D  +V   + +K    +  +Y  +I  L K  K +  +
Sbjct: 311 CVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGM 370

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                 +E G  P TI ++ +I  LC EGK D+A   L  M      P+  +Y  L+
Sbjct: 371 QLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLM 427



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 150/323 (46%), Gaps = 21/323 (6%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +  S+++ G   +   ++ L+  L    + E  ++ + E    G  PN+  +S +I  
Sbjct: 335 VRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDG 394

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C +    EA++ +  M + G+ PN  T++ L+    ++G + +A+ V  +M    C  +
Sbjct: 395 LCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHH 454

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
              Y+ L+ GLC  G+++EA  +   + + G+K DV  Y++++ GFC      + M+L N
Sbjct: 455 EVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFN 514

Query: 250 EAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           + +     + P+VVT+N L N +C + +  + + +L  M  + C PD I+    L  L  
Sbjct: 515 QMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL-- 572

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
               R  +   ++   F  E+  R++             ++     A  + E M +K  +
Sbjct: 573 ----RDNMDPPQDGREFLDELVVRLI-------------KRQRTVGASNIIEVMLQKFLL 615

Query: 368 TDPGTYGIVIRTLGKGKKTDEAL 390
             P T+ + ++ L K  K  + +
Sbjct: 616 PKPSTWALAVQQLCKPMKVRKTI 638


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 197/412 (47%), Gaps = 6/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L     +   + K+G   + + ++ L+  L    +  + ++   E +  G+A N++
Sbjct: 420 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 479

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +C      EA ++ D M D+   PN  TF +++   C  G +++A ++ DQM
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G KP+  TY  L+ GLC    V +A E + +++N     + ++ TA++ GF + GR 
Sbjct: 540 VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRF 599

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            E   L +E   RGV  ++V+F  +     K+    K   L + MK++   PD I Y+ +
Sbjct: 600 TETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCM 659

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K   +  A++ + +MV  G+  +      L+  LC   +     L  A  + ++M
Sbjct: 660 IDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY-----LGSAELLCKEM 714

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                + +  TY   +         ++A   LH A+  GH+   ++FN +I+ LC  GKI
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEKAK-DLHSAMLQGHLASIVSFNILIKGLCKAGKI 773

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +A+ L+  + E    P   SY  +I +L ++     A  L+   L +G+ P
Sbjct: 774 QEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKP 825



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 170/379 (44%), Gaps = 30/379 (7%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A     +    G+ PN + ++ +I   C    F +A ++   M   G  PN  T+ IL
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +++LCK G +++AL + D+M   G K  +  YN L+ G C  G ++ A  +L  +  +GL
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P   +Y+ ++ G C+ G  +  MEL  E  ERG+  N  TF  L NG+CK+    +   
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L   M   N +P++++++ ++ G    G IR A  ++ +MV  G + D     SL+ GLC
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559

Query: 342 MKSWEEK------DL------------------------LEDAYQVFEKMTKKVSVTDPG 371
           + S   K      DL                          + Y ++++M  +    D  
Sbjct: 560 LTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLV 619

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           ++ I++    K    +++ +      E G  P  I +  +I AL  E  + +AL     M
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 679

Query: 432 YEHAKIPSRTSYDMLITKL 450
                 P+  ++ +LI  L
Sbjct: 680 VVDGYSPNTVTHTVLINNL 698



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 164/349 (46%), Gaps = 5/349 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++ +G   S   +N L+  L      + AV+  +   + G+  +  T+  ++  +C   +
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
              A ++   M   G+ P+    + +++ L K   ++EA  +  ++G +G  PN+  YN 
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+  LC   R ++A  +   +   GL+P+  TY  ++   CK G   +A+ L ++  ++G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           +   V  +N+L NGYCK+G+  +  GLL  M K    P   SYS L+ GL + G +   +
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            + +EM   G   +     +L+ G C     +   +++A ++F+KM     + +  T+ +
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFC-----KDKKMDEAARLFDKMIDSNVIPNEVTFNV 518

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +I          +A       +EMG  P   T+ ++I  LC    + KA
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 168/397 (42%), Gaps = 40/397 (10%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           + +L +LV + +   A   F +    G+  + + ++  IR YC   +   AR ++  M  
Sbjct: 167 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR--- 205
            G   +   + +L+  LCK+ R++EA+EV + M  IG   +  TY  L+ G C +     
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286

Query: 206 --------------------------------VEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
                                           VEEA+ +   + + G+ P+V+ Y A++D
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             CK  R ++A  L  E   RG+ PN VT+  L +  CK G     + L   M+ +    
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 406

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
               Y++L+NG  K G +  A  +   MV+ G        + L+ GLC         L  
Sbjct: 407 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC-----RNGDLSS 461

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
             ++  +M ++    +  T+  +I    K KK DEA       I+   IP  +TFN +I+
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             C  G I KA  L   M E    P   +Y  LI+ L
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 184/419 (43%), Gaps = 38/419 (9%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +N L+  L      + A + F E +  GL PN  T++I+I   C +    +A  + 
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M D G    V  +  L+N  CK G L  A  +L  M + G  P   +Y+ L+ GLC  
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G +    E+   +   G+  + YT+TA+++GFCK  + +EA  L ++ I+  V PN VTF
Sbjct: 457 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N +  GYC  G   K   L   M +    PD  +Y +L++GL     +  A     ++  
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576

Query: 324 FGFEVDERMMNSLLRGLCMKS--------WEEK-------DLL---------------ED 353
               ++   + +LL G   +         W+E        DL+               E 
Sbjct: 577 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           +  +F +M ++    D   Y  +I  L K +   +AL      +  G+ P T+T   +I 
Sbjct: 637 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN 696

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSY----DMLITKLDQLEKSYDACALYGAALK 468
            LC  G +  A LL   M     +P++ +Y    D   T+ D +EK+ D   L+ A L+
Sbjct: 697 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGD-MEKAKD---LHSAMLQ 751



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 1/275 (0%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   ++D +   G    +  F  ++ A +  +++E +   F E    G+ P+   ++ MI
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                + +  +A    D M  +GY PN  T T+L+N+LCKSG L  A  +  +M      
Sbjct: 661 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  TYNC L      G +E+A + L +    G    + ++  ++ G CK G+  EA++L
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDL 779

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           +++  E G +P+ ++++T+ +  CK G   K   L   M  +   PD ++Y+  +     
Sbjct: 780 MSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 839

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
            G+   A+ I+  M+R G + +     +LL G+ +
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 165/396 (41%), Gaps = 40/396 (10%)

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
           S G+  N +T S ++        F  AR + D M  +G H +   +T  + + C+S  L 
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
            A  ++ +M   G K +   YN L+ GLC   RV+EA E+   + N G+  D  TY  ++
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 233 DGFCKVGRSNEAM----------------------------ELLNEAI-------ERGVT 257
            GFC++     A+                            EL+ EA        + G+ 
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PNV  +N L +  CK         L K M  R   P++++Y+ L++ L K G I  A+ +
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F +M   G +V     NSL+ G C     ++  L+ A  +   M K+       +Y  +I
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYC-----KQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L +       +       E G      TF  +I   C + K+D+A  L   M +   I
Sbjct: 451 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 510

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P+  +++++I     +     A  LY   ++ G+ P
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKP 546



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/419 (21%), Positives = 162/419 (38%), Gaps = 74/419 (17%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   +++   + + G  W+   F  L+       + + A + F +     + PN  TF++
Sbjct: 459 LSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 518

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC------------------- 166
           MI  YC   +  +A ++ D M + G  P+  T+  L++ LC                   
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 578

Query: 167 ----------------KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
                           + GR  E   + D+M   G K ++ ++  ++         E++ 
Sbjct: 579 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 638

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +K  G+KPD   YT ++D   K     +A+   ++ +  G +PN VT   L N  
Sbjct: 639 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNL 698

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDK----------------------------------I 296
           CK G       L K M   N LP+K                                  +
Sbjct: 699 CKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIV 758

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           S++ L+ GL K GKI+ A+ +  ++   GF  D    ++++  LC     +   +  A++
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELC-----KMGDINKAFE 813

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++ +M  K    D   Y I IR      ++D+AL    + I  G  P   T+  ++  +
Sbjct: 814 LWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 5/309 (1%)

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V+     +G   N  T + ++ SL K  +   A ++ D+M + G   +   Y   ++  C
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
               ++ A  +++ ++++G+K     Y  +M G CK  R  EA+E+ N  +  GVT + V
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+ TL  G+C+       + +   M +   +P + + S +++ L K   +  A S+  ++
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G   +    N+L+  LC     + +  +DA ++F++M  +    +  TY I+I  L 
Sbjct: 330 GDLGMVPNVFAYNALIDKLC-----KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K    ++AL       + G       +N++I   C +G +D+A  LL  M +    P+  
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444

Query: 442 SYDMLITKL 450
           SY  LI  L
Sbjct: 445 SYSPLIAGL 453



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 68/169 (40%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDL 91
             +A L   E L     P       F+D        E+     S    G   S+  FN L
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNIL 763

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           +  L    + + A+   S+ +  G +P+  ++S +I   C   D  +A ++ + M   G 
Sbjct: 764 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
            P+V  + I +      G   +AL +   M R G +PN  TY  LL G+
Sbjct: 824 KPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872


>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 583

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 188/404 (46%), Gaps = 6/404 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+++ ++G   ++  +  L+ AL      ++     S+ +  G+ P+S   + MI  + 
Sbjct: 44  VFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFS 103

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI-GCKPNI 190
                 EA K+   M + G  P  +T+  L+     +GR  E++++L+ MG+    KPN 
Sbjct: 104 ESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPND 163

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           +TYN L++  C   ++EEA+ +L  +   G++PDV TY  +   + + G +  A  L+ +
Sbjct: 164 RTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILK 223

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
                V PN  T   + +GYCKEG   + +  L  MK+    P+ + +++L+ G L    
Sbjct: 224 MPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTD 283

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
                     M  FG + D    +++     M +W    L+E+  ++F  M K     D 
Sbjct: 284 TNGVDEALTLMEEFGIKPDVVTFSTI-----MNAWSSAGLMENCEEIFNDMVKAGIEPDI 338

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             Y I+ +   +  +  +A   L    + G  P  + F  +I   C  GK+D+A  L   
Sbjct: 339 HAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEK 398

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           M+E    P+  +Y+ LI    + ++ + A  L     ++GV+P+
Sbjct: 399 MHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPE 442



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/397 (23%), Positives = 178/397 (44%), Gaps = 8/397 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNS 120
           ++  + E + IF  +K+ G   + S +N L+    +      ++K          + PN 
Sbjct: 104 ESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPND 163

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++I+I+ +C K    EA  V+  M  +G  P+V T+  +  +  ++G  + A  ++ +
Sbjct: 164 RTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILK 223

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M     KPN +T   ++ G C  G + EA   L  +K  G+ P+   + +++ G+     
Sbjct: 224 MPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTD 283

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
           +N   E L    E G+ P+VVTF+T+ N +   G       +   M K    PD  +YS 
Sbjct: 284 TNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSI 343

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L  G ++ G+ R A ++   M ++G + +  +  +++ G C         ++ A+++ EK
Sbjct: 344 LAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAG-----KMDRAFRLCEK 398

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
           M +  +  +  TY  +I   G+ K+  +A   L    E G +P   T   V  A    G 
Sbjct: 399 MHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGL 458

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
             +A  +L    E +++      D +  ++  LE  Y
Sbjct: 459 FKEANRILNGSEEESELDQEFDSDKI--QVQSLESIY 493



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 143/316 (45%), Gaps = 6/316 (1%)

Query: 159 TILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
           T L+N+L   G+  EA  V + +   G KP + TY  L+  L    R +    +L  V +
Sbjct: 26  TKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVAD 85

Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
           +G+KPD     A+++ F + G+ +EAM++  +  E G  P   T+NTL  G+   G P +
Sbjct: 86  NGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYE 145

Query: 279 GVGLLKLM-KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
            + LL++M +  N  P+  +Y+ L+       K+  A ++  +MV  G + D    N++ 
Sbjct: 146 SMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMA 205

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
           R     ++ +    E A ++  KM   +   +  T GI+I    K     EAL  L+   
Sbjct: 206 R-----AYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMK 260

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
           E+G  P  + FN++I+        +     L LM E    P   ++  ++          
Sbjct: 261 ELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLME 320

Query: 458 DACALYGAALKQGVIP 473
           +   ++   +K G+ P
Sbjct: 321 NCEEIFNDMVKAGIEP 336


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 198/416 (47%), Gaps = 40/416 (9%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  ++E ++  + ++  G    +  +N L     +L     A K        GL P+  T
Sbjct: 318 AGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVT 377

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++I+I  +C   +  E+ K+ + M   G   ++ T+T+L++SLCKSGR+ EA+ +L +M 
Sbjct: 378 YTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEME 437

Query: 183 RIGCKPNIQTYN---------------------------CLLKGLCYVGRVEEAYEMLMN 215
            IG KP++ TY+                            ++ GL   G + EA     +
Sbjct: 438 VIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDS 497

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           V    +  ++  Y  ++DG+ K+G   EA+    + IE+G++P +VTFN+L  G+CK+G 
Sbjct: 498 VTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGK 557

Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
             + V LL  +K    +P  ++Y+TL+NG  + G +     +  EM     +  +     
Sbjct: 558 LAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTV 617

Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL-IH-- 392
           +++GLC     ++  L ++ Q+ + M  +    D  TY  VI++  K     +A  +H  
Sbjct: 618 VVKGLC-----KEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQ 672

Query: 393 -LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            L H+++    P  +T+N +I  LC  G +  A  LL  + + +   ++ +Y  +I
Sbjct: 673 MLQHSLQ----PSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTII 724



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 183/377 (48%), Gaps = 13/377 (3%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+++ IK  G   +      L+  L   +  + AV F  E       P+  +F+ ++  +
Sbjct: 221 DVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGF 280

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C       A+     M   G  P+V ++ IL++ LC +G ++EALE  + M   G +P+I
Sbjct: 281 CKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDI 340

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L  G   +G +  A++++  +  +GL PD+ TYT ++ G C++G   E+ +L  +
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEK 400

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + +G+  ++VT+  L +  CK G   + V LL  M+     PD ++YS         G 
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GA 452

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A+ +++EM       +  + ++++ GL      EK  + +A   F+ +TK     + 
Sbjct: 453 VEEAIELYEEMCSKRIYPNSFVCSAIISGLF-----EKGAISEAQMYFDSVTKSDVAEEI 507

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
             Y I+I    K     EA+      IE G  P  +TFN++I   C +GK+ +A+ LL  
Sbjct: 508 ILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 567

Query: 431 MYEHAKIPSRTSYDMLI 447
           +  H  +P+  +Y  L+
Sbjct: 568 IKVHGLVPTSVTYTTLM 584



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 171/375 (45%), Gaps = 11/375 (2%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A++ + E  S  + PNS+  S +I     K    EA+   D +  +     +  + I+
Sbjct: 454 EEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIM 513

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++   K G + EA+    Q+   G  P I T+N L+ G C  G++ EA ++L  +K  GL
Sbjct: 514 IDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGL 573

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P   TYT +M+G+C+ G  +   ++L+E   + + P  +T+  +  G CKEG   + V 
Sbjct: 574 VPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQ 633

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           LLK M  R   PD+I+Y+T++    K   ++ A  +  +M++   +      N L+ GLC
Sbjct: 634 LLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLC 693

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
           +        L+DA ++   +  +        Y  +I+          AL+  H  +E G 
Sbjct: 694 VYGN-----LKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGF 748

Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
                 ++ VI  LC    I  A     +M  H   P +   D+ +  L+   +S D  +
Sbjct: 749 EVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQ---DICLVMLNAFHRSGDPNS 805

Query: 462 ---LYGAALKQGVIP 473
              ++   +K G++P
Sbjct: 806 VFEIFAMMIKCGLLP 820



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 144/282 (51%), Gaps = 5/282 (1%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           FDS+ K      +  +N ++     L     AV+ + +    G++P   TF+ +I  +C 
Sbjct: 495 FDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCK 554

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
           K    EA K++D +  +G  P   T+T L+N  C+ G +    ++L +M     KP   T
Sbjct: 555 KGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQIT 614

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           Y  ++KGLC  GR+ E+ ++L  +   GL PD  TY  V+  FCK     +A +L N+ +
Sbjct: 615 YTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQML 674

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
           +  + P+ VT+N L NG C  G       LL  ++ ++    K++Y+T++      G ++
Sbjct: 675 QHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQ 734

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            A+  F +MV  GFEV  R  ++++  LC     +++L+ DA
Sbjct: 735 NALVFFHQMVERGFEVSIRDYSAVINRLC-----KRNLITDA 771



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 4/281 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E +  +  I + G + ++  FN L+       +   AVK       +GL P S 
Sbjct: 519 KLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSV 578

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ ++  YC + D      ++  M      P   T+T++V  LCK GRL E++++L  M
Sbjct: 579 TYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYM 638

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P+  TYN +++  C    +++A+++   +    L+P   TY  +++G C  G  
Sbjct: 639 YARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNL 698

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A  LL    ++ +    V + T+   +C +G     +     M +R        YS +
Sbjct: 699 KDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAV 758

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDER----MMNSLLR 338
           +N L K   I  A   F  M+  G   D+     M+N+  R
Sbjct: 759 INRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHR 799



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 119/265 (44%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E + + D+IK  G   +   +  L+       +  +      E  +  + P   
Sbjct: 554 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 613

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++++  C +    E+ +++  M+  G  P+  T+  ++ S CK+  L++A ++ +QM
Sbjct: 614 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 673

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +   +P+  TYN L+ GLC  G +++A  +L+ +++  ++     YT ++   C  G  
Sbjct: 674 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDV 733

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+   ++ +ERG   ++  ++ + N  CK            +M      PD+     +
Sbjct: 734 QNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVM 793

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGF 326
           LN   + G       IF  M++ G 
Sbjct: 794 LNAFHRSGDPNSVFEIFAMMIKCGL 818



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 159/361 (44%), Gaps = 26/361 (7%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           + +L++L + N       F    + YG   +  ++ I+      K    E R+V++ M +
Sbjct: 84  DQILLSLRVDNSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVE 143

Query: 149 ---NGYHP---------------NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
              +G  P               N   + +L  +  ++  + +AL VL +M  +  + +I
Sbjct: 144 EEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSI 203

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN LL  L +   + + Y     +K  G+  + YT   ++DG C+  R  +A+  L E
Sbjct: 204 ATYNSLLYNLRHTDIMWDVYN---EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRE 260

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
                  P+VV+FN L +G+CK G+         +M K   LPD  SY+ LL+GL   G 
Sbjct: 261 TGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGS 320

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A+    +M   G E D    N L  G     +    L+  A++V ++M       D 
Sbjct: 321 MEEALEFTNDMENHGVEPDIVTYNILANG-----FRILGLISGAWKVVQRMLLNGLNPDL 375

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY I+I    +    +E+       +  G     +T+  ++ +LC  G+ID+A++LL  
Sbjct: 376 VTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHE 435

Query: 431 M 431
           M
Sbjct: 436 M 436



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/197 (18%), Positives = 84/197 (42%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E + +   +   G       +N ++ +    ++ + A +  ++   + L P+  
Sbjct: 624 KEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPV 683

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I   C   +  +A +++  + D         +T ++ + C  G ++ AL    QM
Sbjct: 684 TYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQM 743

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G + +I+ Y+ ++  LC    + +A      +   G+ PD      +++ F + G  
Sbjct: 744 VERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDP 803

Query: 242 NEAMELLNEAIERGVTP 258
           N   E+    I+ G+ P
Sbjct: 804 NSVFEIFAMMIKCGLLP 820


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 182/346 (52%), Gaps = 8/346 (2%)

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP 153
            L  +  ++ A + F E  + G+ PN  ++S ++  +C      E++++ + M D G  P
Sbjct: 71  GLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQP 130

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           N+  F +L++ LCK G++ EA ++L+   + G   ++ TYN L+ G C +G +  A ++ 
Sbjct: 131 NLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLF 190

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
           +++ + G + +  +YT +++G+CK+ +  EAM L NE  + G  PNV T++TL  G  + 
Sbjct: 191 LSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQT 250

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G       L  +MK      D   Y   L+GL K G +  A+ +F E+  + F++D    
Sbjct: 251 GKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESY 310

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
           + L+ GLC     +   +E A++ F++++++    +  T  I+I    + ++ D+A I  
Sbjct: 311 SRLIDGLC-----KAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILF 365

Query: 394 HHAIEM---GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
               +M   G  P  IT+N +++  C   K+++ + LL  M++  +
Sbjct: 366 EKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKRMR 411



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 178/362 (49%), Gaps = 25/362 (6%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT--------------- 159
           GL+P+ +T +I+  C CN N   E    +  +   GY P++ T+                
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 160 --ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
             I+++ LCK G   EA E+ ++M   G  PN+ +Y+ L+ G C  G++EE+  +   + 
Sbjct: 65  TCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMV 124

Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
           + G++P++  +  ++D  CK G+  EA +LL   I+RG+  ++VT+N+L +G+CK G   
Sbjct: 125 DQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLS 184

Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
               L   M  + C  ++ISY+ L+NG  K  K+  A++++ EM + G   + +  ++LL
Sbjct: 185 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLL 244

Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
            GL      +   + DA ++F  M       D   Y I +  L K     EA+   +   
Sbjct: 245 TGLL-----QTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELK 299

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TKLDQLE 454
                    +++ +I  LC  GK++ A      + +    P+  + +++I    +++Q++
Sbjct: 300 SYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVD 359

Query: 455 KS 456
           K+
Sbjct: 360 KA 361



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 149/306 (48%), Gaps = 8/306 (2%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           A  L+E   +F+ +   G   ++  FN L+  L    +   A K        G+  +  T
Sbjct: 110 AGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVT 169

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           ++ +I  +C   D   ARK+   M   G   N  ++TIL+N  CK  +++EA+ + ++M 
Sbjct: 170 YNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMP 229

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
           ++G +PN++TY+ LL GL   G+V +A ++   +K  G+  D   Y   +DG CK G   
Sbjct: 230 QVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLF 289

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
           EAMEL NE        +  +++ L +G CK G         K + +    P+ ++ + ++
Sbjct: 290 EAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMI 349

Query: 303 NGLLKWGKIRPAVSIFKEMVRF---GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           +G  +  ++  A  +F++M +    G   D    N+LLRG C     E + LE+   +  
Sbjct: 350 HGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFC-----ESNKLEEVVNLLH 404

Query: 360 KMTKKV 365
           KM K++
Sbjct: 405 KMFKRM 410



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 3/231 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L     +F S+   G   +   +  L+     + + E A+  ++E    G  PN  
Sbjct: 179 KIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVK 238

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S ++          +A K+   M  +G   +   + I ++ LCK+G L EA+E+ +++
Sbjct: 239 TYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNEL 298

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                K + ++Y+ L+ GLC  G+VE A+E    +  +GL+P+V T   ++ GFC+V + 
Sbjct: 299 KSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQV 358

Query: 242 NEA---MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
           ++A    E + +  E G TP+++T+NTL  G+C+     + V LL  M KR
Sbjct: 359 DKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 209/485 (43%), Gaps = 78/485 (16%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA   KE +  F  I + G   +    N LL +         A +F    S   ++ +  
Sbjct: 471 KAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVA 530

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           +F+ +I  YC + +  EA  V D M  +G+ P++ T+  L+  LC+ G L +A E +  +
Sbjct: 531 SFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL 590

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               C  + +T N LL G+C  G ++EA ++   +    + PD YTYT ++DGFCK G+ 
Sbjct: 591 LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKI 650

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGY-----------------CKEG---------T 275
             A+ LL   +E+G+ P+ + +  L NG                  CKEG         +
Sbjct: 651 VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNS 710

Query: 276 PMKGV----------GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
            M G            L++ M +    P   SY+ L++G +K G++   + ++++MV+ G
Sbjct: 711 MMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG 770

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP--------------- 370
            + D      L+ GLC     E  L+E A +  EKM  + S   P               
Sbjct: 771 IKPDNVTYRLLIFGLC-----EYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRV 825

Query: 371 ----GTY---------GIV---------IRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
               G +         G+V         +R L K  K +EA+I     +  G +P   TF
Sbjct: 826 GDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATF 885

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
             ++  LC E KID A  L  LM          +Y++LIT L   +   DA  LY     
Sbjct: 886 TTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKS 945

Query: 469 QGVIP 473
           +G++P
Sbjct: 946 KGLLP 950



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 178/410 (43%), Gaps = 25/410 (6%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K    K  + I D ++K+G    +  +N ++  L  L     A           L P+ 
Sbjct: 275 VKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDE 334

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +++ +I  +  +     A  + + M      P+V T+T L++  C++GR  EA  VL +
Sbjct: 335 CSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYE 394

Query: 181 MGRIGCK--------------------PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           M   G +                    P++ TY+ L+ G+C +G + E  E+L  ++  G
Sbjct: 395 MQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSG 454

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           + P+   YT ++  FCK G + EA++   +    G+  N V  N L   + +EG   +  
Sbjct: 455 VLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAE 514

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
              + M +     D  S++ +++   + G +  A S++  MVR G+  D     SLLRGL
Sbjct: 515 QFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGL 574

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C     +   L  A +    + +K    D  T   ++  + K    DEAL      +   
Sbjct: 575 C-----QGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN 629

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            +P T T+  ++   C  GKI  AL+LL +M E   +P   +Y  L+  L
Sbjct: 630 ILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGL 679



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 201/445 (45%), Gaps = 33/445 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E  +I   ++K G   +   +  L+         + A+K+F +    GL  NS 
Sbjct: 436 KMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSV 495

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
             + ++  +  +    EA +    M       +V +F  +++S C+ G + EA  V D M
Sbjct: 496 IHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNM 555

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G  P+I TY  LL+GLC  G + +A E ++ +       D  T   ++ G CK G  
Sbjct: 556 VRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTL 615

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA++L  + + R + P+  T+  L +G+CK G  +  + LL++M ++  +PD I+Y+ L
Sbjct: 616 DEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCL 675

Query: 302 LNGLLKWGKIRPAVSIFKEMV-RFGFEVD----ERMMNSLLRG----------------- 339
           LNGL+  G+++ A  +F+E++ + G   D      MMN  L+G                 
Sbjct: 676 LNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENE 735

Query: 340 ---------LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                    + M  + +K  L     ++  M K+    D  TY ++I  L +    + A+
Sbjct: 736 VYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAV 795

Query: 391 IHLHHAI--EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
             L   +  E G  P+   +  +I A C  G ID A  L   M     +PS  +   ++ 
Sbjct: 796 KFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVR 855

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
            L +  K  +A  ++ + ++ G++P
Sbjct: 856 GLCKCGKVEEAIIVFSSIMRAGMVP 880



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 183/408 (44%), Gaps = 9/408 (2%)

Query: 48  NPRSLQAQRFVDRIKASPLKER-----IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQE 102
           N R+ +A+R +  ++ + ++ R       I   +  DG +  V  ++ L+  +  +    
Sbjct: 382 NGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIH 441

Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
              +  S     G+ PN+  ++ ++  +C      EA K    ++ +G   N      L+
Sbjct: 442 ETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALL 501

Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
            S  + G + EA +    M R+    ++ ++NC++   C  G V EA+ +  N+   G  
Sbjct: 502 CSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWP 561

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           PD+ TY +++ G C+ G   +A E +   +E+    +  T NTL  G CK GT  + + L
Sbjct: 562 PDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDL 621

Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
            + M  RN LPD  +Y+ LL+G  K GKI PA+ + + M+  G   D      LL GL  
Sbjct: 622 CEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLV- 680

Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
               E  +   +Y   E + K+    D   Y  ++    KG + +E    + +  E    
Sbjct: 681 ---NEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVY 737

Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           P + ++N ++     +G++ + L L   M +    P   +Y +LI  L
Sbjct: 738 PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGL 785



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/434 (23%), Positives = 188/434 (43%), Gaps = 54/434 (12%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   S+   N++L ALV +N+ E    F  E+       +  T +I++   C +    +A
Sbjct: 190 GFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKA 249

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             ++  M  N   PN  T+  ++N   K GR K AL +LD M + G + ++ TYN ++  
Sbjct: 250 ESMLQKM-KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDK 308

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC + R   AY +L  ++   L PD  +Y  ++ GF   G+ N A+ + N+ + + + P+
Sbjct: 309 LCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPS 368

Query: 260 VVTFNTLFNGYCKEGTP--------------------MKGVGLLKLMKKRNCLPDKISYS 299
           V T+  L +GYC+ G                       K   +LK M      PD I+YS
Sbjct: 369 VATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYS 428

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFG--------------------------FEVD---- 329
            L+NG+ K G I     I   M + G                          + VD    
Sbjct: 429 ALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRS 488

Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
             + NS++    + S+  + ++ +A Q  + M++     D  ++  +I +  +     EA
Sbjct: 489 GLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEA 548

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL-LLLFLMYEHAKIPSRTSYDML-- 446
                + +  G  P   T+ ++++ LC  G + +A   +++L+ +   I  +T   +L  
Sbjct: 549 FSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVG 608

Query: 447 ITKLDQLEKSYDAC 460
           I K   L+++ D C
Sbjct: 609 ICKHGTLDEALDLC 622



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 139/289 (48%), Gaps = 8/289 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           +  LL  LV   + + A   F E     GL  +   ++ M+  Y       E  +++  M
Sbjct: 672 YTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNM 731

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            +N  +P+  ++ IL++   K G+L   L +   M + G KP+  TY  L+ GLC  G +
Sbjct: 732 HENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLI 791

Query: 207 EEAYEML--MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           E A + L  M ++  GL+P    Y A+++  C+VG  + A EL  +    GV P+ V  +
Sbjct: 792 EIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAES 851

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           ++  G CK G   + + +   + +   +P   +++TL++GL K  KI  A  + + M   
Sbjct: 852 SIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESC 911

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           G +VD    N L+ GLC      K  + DA  ++E+M  K  + +  TY
Sbjct: 912 GLKVDVVTYNVLITGLC-----NKKCICDALDLYEEMKSKGLLPNITTY 955



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/390 (20%), Positives = 165/390 (42%), Gaps = 43/390 (11%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
            N LL+ +      + A+    +  +  + P+++T++I++  +C +     A  ++  M 
Sbjct: 602 LNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMML 661

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRV 206
           + G  P+   +T L+N L   G++K A  +  ++  + G   +   YN ++ G    G++
Sbjct: 662 EKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQI 721

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            E   ++ N+  + + P   +Y  +M G+ K G+ +  + L  + ++ G+ P+ VT+  L
Sbjct: 722 NEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLL 781

Query: 267 FNGYCKEGTPMKGVGLLKLM-------------------------------------KKR 289
             G C+ G     V  L+ M                                     K  
Sbjct: 782 IFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKAL 841

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
             +P +++ S+++ GL K GK+  A+ +F  ++R G         +L+ GLC K ++   
Sbjct: 842 GVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLC-KEFK--- 897

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
            ++DA+ + + M       D  TY ++I  L   K   +AL         G +P   T+ 
Sbjct: 898 -IDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYI 956

Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
            +  A+   G +     LL  + +   +PS
Sbjct: 957 TLTGAMYATGTMQDGEKLLKDIEDRGIVPS 986



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 10/265 (3%)

Query: 84   SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
            S + +N L+   +   +    +  + +    G+ P++ T+ ++I   C       A K +
Sbjct: 739  SSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFL 798

Query: 144  DCMF--DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
            + M   ++G  P  T +  L+N+ C+ G +  A E+ + M  +G  P+    + +++GLC
Sbjct: 799  EKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLC 858

Query: 202  YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
              G+VEEA  +  ++   G+ P + T+T +M G CK  + ++A  L       G+  +VV
Sbjct: 859  KCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVV 918

Query: 262  TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            T+N L  G C +      + L + MK +  LP+  +Y TL   +   G ++    + K++
Sbjct: 919  TYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDI 978

Query: 322  VRFGF--------EVDERMMNSLLR 338
               G          ++ RM N++ R
Sbjct: 979  EDRGIVPSYKHPESLEWRMENAIKR 1003



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 110/235 (46%), Gaps = 2/235 (0%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA--SSYGLAP 118
           IK   L   + ++  + K+G       +  L+  L      E AVKF  +      GL P
Sbjct: 751 IKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQP 810

Query: 119 NSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL 178
               +  +I   C   D   A ++ + M   G  P+    + +V  LCK G+++EA+ V 
Sbjct: 811 KHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVF 870

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
             + R G  P I T+  L+ GLC   ++++A+ +   +++ GLK DV TY  ++ G C  
Sbjct: 871 SSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNK 930

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
               +A++L  E   +G+ PN+ T+ TL       GT   G  LLK ++ R  +P
Sbjct: 931 KCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 985



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 141/329 (42%), Gaps = 56/329 (17%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP------------------------- 188
           N+ +  +LVN+  K G++ +A   +  M   G K                          
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 189 ----------NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
                     ++ T N +L  LC  G++ +A  ML  +KN  L P+  TY  +++ + K 
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKK 277

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           GR   A+ +L++  + G+  ++ T+N + +  CK     +   LLK M++ N  PD+ SY
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           +TL++G    GKI  A+ IF +M+R   +       +L+ G C          ++A +V 
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRT-----DEARRVL 392

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            +M            G+  R + K K+       L   +  G  P  IT++ +I  +C  
Sbjct: 393 YEMQ---------ITGVRPREVSKAKQI------LKCMLADGIDPDVITYSALINGMCKM 437

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           G I +   +L  M +   +P+   Y  L+
Sbjct: 438 GMIHETKEILSRMQKSGVLPNNVLYTTLV 466



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 9/248 (3%)

Query: 186 CKP-NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           C P N+ + + L+      G+V +A   +  +   G K  +++   +++    + +S   
Sbjct: 155 CDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYV 214

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC-LPDKISYSTLLN 303
              L E+++R    +V T N + N  C +G   K   +L+ MK  NC LP+ ++Y+T+LN
Sbjct: 215 WLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK--NCRLPNAVTYNTILN 272

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
             +K G+ + A+ I  +M + G E D    N ++  LC      +     AY + ++M +
Sbjct: 273 WYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSAR-----AYLLLKRMRE 327

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
                D  +Y  +I       K + A+   +  +     P   T+  +I   C  G+ D+
Sbjct: 328 VNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDE 387

Query: 424 ALLLLFLM 431
           A  +L+ M
Sbjct: 388 ARRVLYEM 395



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 86/229 (37%), Gaps = 29/229 (12%)

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           L   I R    N+ + + L N Y KEG  +     +  M +        S + +LN L+ 
Sbjct: 148 LLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVG 207

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS----------------------- 344
             K        KE +   F +D    N +L  LC +                        
Sbjct: 208 INKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTY 267

Query: 345 ------WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
                 + +K   + A ++ + M K     D  TY I+I  L K K++  A + L    E
Sbjct: 268 NTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMRE 327

Query: 399 MGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +   P   ++N +I    GEGKI+ A+ +   M   +  PS  +Y  LI
Sbjct: 328 VNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALI 376



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 61/128 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E I +F SI + G   +++ F  L+  L    + + A        S GL  +  
Sbjct: 859 KCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVV 918

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I   CNK    +A  + + M   G  PN+TT+  L  ++  +G +++  ++L  +
Sbjct: 919 TYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDI 978

Query: 182 GRIGCKPN 189
              G  P+
Sbjct: 979 EDRGIVPS 986


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 197/412 (47%), Gaps = 6/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L     +   + K+G   + + ++ L+  L    +  + ++   E +  G+A N++
Sbjct: 443 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 502

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +C      EA ++ D M D+   PN  TF +++   C  G +++A ++ DQM
Sbjct: 503 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 562

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G KP+  TY  L+ GLC    V +A E + +++N     + ++ TA++ GF + GR 
Sbjct: 563 VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRF 622

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            E   L +E   RGV  ++V+F  +     K+    K   L + MK++   PD I Y+ +
Sbjct: 623 TETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCM 682

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K   +  A++ + +MV  G+  +      L+  LC   +     L  A  + ++M
Sbjct: 683 IDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY-----LGSAELLCKEM 737

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                + +  TY   +         ++A   LH A+  GH+   ++FN +I+ LC  GKI
Sbjct: 738 LAGNVLPNKFTYNCFLDYFATEGDMEKAK-DLHSAMLQGHLASIVSFNILIKGLCKAGKI 796

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +A+ L+  + E    P   SY  +I +L ++     A  L+   L +G+ P
Sbjct: 797 QEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKP 848



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 170/379 (44%), Gaps = 30/379 (7%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A     +    G+ PN + ++ +I   C    F +A ++   M   G  PN  T+ IL
Sbjct: 343 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 402

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +++LCK G +++AL + D+M   G K  +  YN L+ G C  G ++ A  +L  +  +GL
Sbjct: 403 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 462

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P   +Y+ ++ G C+ G  +  MEL  E  ERG+  N  TF  L NG+CK+    +   
Sbjct: 463 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 522

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L   M   N +P++++++ ++ G    G IR A  ++ +MV  G + D     SL+ GLC
Sbjct: 523 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 582

Query: 342 MKSWEEK------DL------------------------LEDAYQVFEKMTKKVSVTDPG 371
           + S   K      DL                          + Y ++++M  +    D  
Sbjct: 583 LTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLV 642

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           ++ I++    K    +++ +      E G  P  I +  +I AL  E  + +AL     M
Sbjct: 643 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 702

Query: 432 YEHAKIPSRTSYDMLITKL 450
                 P+  ++ +LI  L
Sbjct: 703 VVDGYSPNTVTHTVLINNL 721



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 164/349 (46%), Gaps = 5/349 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++ +G   S   +N L+  L      + AV+  +   + G+  +  T+  ++  +C   +
Sbjct: 247 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 306

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
              A ++   M   G+ P+    + +++ L K   ++EA  +  ++G +G  PN+  YN 
Sbjct: 307 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 366

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+  LC   R ++A  +   +   GL+P+  TY  ++   CK G   +A+ L ++  ++G
Sbjct: 367 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 426

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           +   V  +N+L NGYCK+G+  +  GLL  M K    P   SYS L+ GL + G +   +
Sbjct: 427 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 486

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            + +EM   G   +     +L+ G C     +   +++A ++F+KM     + +  T+ +
Sbjct: 487 ELHREMAERGIAWNNYTFTALINGFC-----KDKKMDEAARLFDKMIDSNVIPNEVTFNV 541

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +I          +A       +EMG  P   T+ ++I  LC    + KA
Sbjct: 542 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 590



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 168/397 (42%), Gaps = 40/397 (10%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           + +L +LV + +   A   F +    G+  + + ++  IR YC   +   AR ++  M  
Sbjct: 190 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 249

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR--- 205
            G   +   + +L+  LCK+ R++EA+EV + M  IG   +  TY  L+ G C +     
Sbjct: 250 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 309

Query: 206 --------------------------------VEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
                                           VEEA+ +   + + G+ P+V+ Y A++D
Sbjct: 310 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 369

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             CK  R ++A  L  E   RG+ PN VT+  L +  CK G     + L   M+ +    
Sbjct: 370 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 429

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
               Y++L+NG  K G +  A  +   MV+ G        + L+ GLC         L  
Sbjct: 430 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC-----RNGDLSS 484

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
             ++  +M ++    +  T+  +I    K KK DEA       I+   IP  +TFN +I+
Sbjct: 485 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 544

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             C  G I KA  L   M E    P   +Y  LI+ L
Sbjct: 545 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 581



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 184/419 (43%), Gaps = 38/419 (9%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +N L+  L      + A + F E +  GL PN  T++I+I   C +    +A  + 
Sbjct: 360 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 419

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M D G    V  +  L+N  CK G L  A  +L  M + G  P   +Y+ L+ GLC  
Sbjct: 420 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 479

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G +    E+   +   G+  + YT+TA+++GFCK  + +EA  L ++ I+  V PN VTF
Sbjct: 480 GDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 539

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N +  GYC  G   K   L   M +    PD  +Y +L++GL     +  A     ++  
Sbjct: 540 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 599

Query: 324 FGFEVDERMMNSLLRGLCMKS--------WEEK-------DLL---------------ED 353
               ++   + +LL G   +         W+E        DL+               E 
Sbjct: 600 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 659

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           +  +F +M ++    D   Y  +I  L K +   +AL      +  G+ P T+T   +I 
Sbjct: 660 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN 719

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSY----DMLITKLDQLEKSYDACALYGAALK 468
            LC  G +  A LL   M     +P++ +Y    D   T+ D +EK+ D   L+ A L+
Sbjct: 720 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGD-MEKAKD---LHSAMLQ 774



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 1/284 (0%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   ++D +   G    +  F  ++ A +  +++E +   F E    G+ P+   ++ MI
Sbjct: 624 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 683

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                + +  +A    D M  +GY PN  T T+L+N+LCKSG L  A  +  +M      
Sbjct: 684 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 743

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  TYNC L      G +E+A + L +    G    + ++  ++ G CK G+  EA++L
Sbjct: 744 PNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDL 802

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           +++  E G +P+ ++++T+ +  CK G   K   L   M  +   PD ++Y+  +     
Sbjct: 803 MSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 862

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            G+   A+ I+  M+R G + +     +LL G+ +   + + LL
Sbjct: 863 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQALL 906



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/431 (21%), Positives = 167/431 (38%), Gaps = 74/431 (17%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   +++   + + G  W+   F  L+       + + A + F +     + PN  TF++
Sbjct: 482 LSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 541

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC------------------- 166
           MI  YC   +  +A ++ D M + G  P+  T+  L++ LC                   
Sbjct: 542 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 601

Query: 167 ----------------KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
                           + GR  E   + D+M   G K ++ ++  ++         E++ 
Sbjct: 602 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 661

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +K  G+KPD   YT ++D   K     +A+   ++ +  G +PN VT   L N  
Sbjct: 662 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNL 721

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDK----------------------------------I 296
           CK G       L K M   N LP+K                                  +
Sbjct: 722 CKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIV 781

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           S++ L+ GL K GKI+ A+ +  ++   GF  D    ++++  LC     +   +  A++
Sbjct: 782 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELC-----KMGDINKAFE 836

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           ++ +M  K    D   Y I IR      ++D+AL    + I  G  P   T+  ++  + 
Sbjct: 837 LWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 896

Query: 417 GEGKIDKALLL 427
                 +ALLL
Sbjct: 897 LMVSKGQALLL 907



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 5/309 (1%)

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V+     +G   N  T + ++ SL K  +   A ++ D+M + G   +   Y   ++  C
Sbjct: 173 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 232

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
               ++ A  +++ ++++G+K     Y  +M G CK  R  EA+E+ N  +  GVT + V
Sbjct: 233 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 292

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+ TL  G+C+       + +   M +   +P + + S +++ L K   +  A S+  ++
Sbjct: 293 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 352

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G   +    N+L+  LC     + +  +DA ++F++M  +    +  TY I+I  L 
Sbjct: 353 GDLGMVPNVFAYNALIDKLC-----KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 407

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K    ++AL       + G       +N++I   C +G +D+A  LL  M +    P+  
Sbjct: 408 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 467

Query: 442 SYDMLITKL 450
           SY  LI  L
Sbjct: 468 SYSPLIAGL 476



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 125/289 (43%), Gaps = 5/289 (1%)

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G   N  T + +L  L  + +   A ++   +   G+  D Y YTA +  +C+    + A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L+      GV  + V +N L  G CK     + V +  +M       D+++Y TL+ G
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             +  ++  A+ I  +M+R GF   E   + ++  L      +K+L+E+A+ +  K+   
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDEL-----RKKELVEEAFSLACKLGDL 355

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             V +   Y  +I  L K ++ D+A          G  P  +T+  +I ALC  G I+ A
Sbjct: 356 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 415

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L L   M +     +   Y+ LI    +      A  L    +K+G+ P
Sbjct: 416 LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTP 464



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 68/169 (40%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDL 91
             +A L   E L     P       F+D        E+     S    G   S+  FN L
Sbjct: 727 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNIL 786

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           +  L    + + A+   S+ +  G +P+  ++S +I   C   D  +A ++ + M   G 
Sbjct: 787 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 846

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
            P+V  + I +      G   +AL +   M R G +PN  TY  LL G+
Sbjct: 847 KPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895


>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
 gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 472

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 181/388 (46%), Gaps = 49/388 (12%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +F  +K    + S   +  +L  LV  N+   A KF+      GL P   + +++I
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163

Query: 128 RCYCNKNDFFEAR-KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  C  +   +A  K+   M   G  P+  T+  L++ LC+ GR+ EA ++  +M    C
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P + TY  L+ GLC    V+EA   L  +K+ G++P+V+TY+++MDG CK GRS +AME
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L    + RG  PN+VT+ TL  G CKE    + V LL  M  +   PD   Y  +++G  
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343

Query: 307 KWGKIRPAVSIFKEMV-------RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
              K R A +   EM+       R  + +  +  N ++RGLC       +    A+ ++ 
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC------ANYPSRAFTLYL 397

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            M  +         GI +                   +E        T  ++++ LC +G
Sbjct: 398 SMRSR---------GISVE------------------VE--------TLESLVKCLCKKG 422

Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           +  KA+ L+  +     IPS+ ++ +LI
Sbjct: 423 EFQKAVQLVDEIVTDGCIPSKGTWKLLI 450



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 167/363 (46%), Gaps = 16/363 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           +++ + +FDS   +  N  V D   F  +++ LV  N+ + A              +   
Sbjct: 29  VEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDI 88

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
              + R Y   +  F++ +V   M D    P+   +  ++  L +  +L  A +    M 
Sbjct: 89  LLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMR 148

Query: 183 RIGCKPNIQTYNCLLKGLCY-VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            IG  P + + N L+K LC   G V+   ++ + +   G  PD YTY  ++ G C+ GR 
Sbjct: 149 EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRI 208

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA +L  E +E+   P VVT+ +L NG C      + +  L+ MK +   P+  +YS+L
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSL 268

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K G+   A+ +F+ M+  G   +     +L+ GLC    E+K  +++A ++ ++M
Sbjct: 269 MDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK---EQK--IQEAVELLDRM 323

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF-------NNVIQA 414
             +    D G YG VI       K  EA   L   I  G  P  +T+       N V++ 
Sbjct: 324 NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRG 383

Query: 415 LCG 417
           LC 
Sbjct: 384 LCA 386



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 41/278 (14%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + IF  + K G +     +  L+  L      + A K F+E      AP   T++ +I  
Sbjct: 177 LKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C   +  EA + ++ M   G  PNV T++ L++ LCK GR  +A+E+ + M   GC+PN
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY  L+ GLC   +++EA E+L  +   GLKPD   Y  V+ GFC + +  EA   L+
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLD 356

Query: 250 EAIERGVTPNVVTFN-----------------------------------------TLFN 268
           E I  G+TPN +T+N                                         +L  
Sbjct: 357 EMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVK 416

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
             CK+G   K V L+  +    C+P K ++  L+   L
Sbjct: 417 CLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTL 454



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 143/330 (43%), Gaps = 6/330 (1%)

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
           + NGY  + ++F  +V  L  + + K A +++ +M    C  +      + +G   V R 
Sbjct: 43  YANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRP 102

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            ++  +   +K+    P    Y  V+    +  + N A +      E G+ P V + N L
Sbjct: 103 FDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVL 162

Query: 267 FNGYCK-EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
               C+ +GT   G+ +   M KR C PD  +Y TL++GL ++G+I  A  +F EMV   
Sbjct: 163 IKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD 222

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                    SL+ GLC         +++A +  E+M  K    +  TY  ++  L K  +
Sbjct: 223 CAPTVVTYTSLINGLCGSKN-----VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           + +A+      +  G  P  +T+  +I  LC E KI +A+ LL  M      P    Y  
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +I+    + K  +A       +  G+ P R
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNR 367


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 196/416 (47%), Gaps = 14/416 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + + +++   +K  G   ++  F  L+  L  LN  + A++ F +     + P+++
Sbjct: 64  KAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAF 123

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++++I   C  N    A    + M  +G  P+  T+T+LV+SL K+ + ++  ++ ++M
Sbjct: 124 LYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEM 183

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P + TY  ++ G C  GR+++A  ++  +K  G  P    Y+ ++DG CK  R 
Sbjct: 184 LSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRH 243

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA EL   A   G   +V+ + +  +G CK G   +   +   M +  C PD +SY+ +
Sbjct: 244 DEARELFEMAA--GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVI 301

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  L K  ++  A  +  + +         +   L+ GLC     +   +E+A  + E+M
Sbjct: 302 IYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLC-----KSRRVEEACVILERM 356

Query: 362 ----TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
                +  SV    TY  VI  L K  + D+A + L      G +P  +T+  +I A C 
Sbjct: 357 LETGDRAPSVV---TYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCK 413

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            G++D+A  L   M+E        +Y++LI    +  K  +A A+      +G+ P
Sbjct: 414 VGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQP 469



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 125/208 (60%), Gaps = 1/208 (0%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G AP+  +++++I   C  N   EA++++D   +    P V   T+LV+ LCKS R++EA
Sbjct: 290 GCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEA 349

Query: 175 LEVLDQMGRIGCK-PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
             +L++M   G + P++ TY+ ++ GLC   R+++AY +L  ++  G  PDV TYTA++D
Sbjct: 350 CVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIID 409

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
            FCKVGR +EA EL     ERG   +VV +N L  GYC+     + + +++ M  R   P
Sbjct: 410 AFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQP 469

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           + +S ST+++GL K  ++  A  + ++M
Sbjct: 470 NVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 177/386 (45%), Gaps = 8/386 (2%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N LL   V       A + F +       P+ +T+  +IR +C      +A  ++  M  
Sbjct: 21  NSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKA 80

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G  P + TF  L+  LC+     +AL++  QM  +  KP+   Y  ++  LC + +++ 
Sbjct: 81  AGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDL 140

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A      +   G  PD  TYT ++    K  +  +  ++  E + +G +P +VT+ T+ N
Sbjct: 141 AASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVN 200

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
           GYCK G   + + L++ +K     P    YSTL++GL K  +   A  +F EM   G   
Sbjct: 201 GYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMAA-GDVQ 258

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           D  +  S + GLC     +   L++A  V  KM +     DP +Y ++I +L K  +  E
Sbjct: 259 DVIVYTSFISGLC-----KAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 313

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA-KIPSRTSYDMLI 447
           A   +  A+E   +P       ++  LC   ++++A ++L  M E   + PS  +Y  +I
Sbjct: 314 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVI 373

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L + ++  DA  +     + G +P
Sbjct: 374 DGLCKADRLDDAYVVLQKMRRAGCVP 399



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 158/311 (50%), Gaps = 9/311 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  + + + +   +K  G + S S ++ L+  L   +  + A + F  A+  G   +  
Sbjct: 204 KAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAA--GDVQDVI 261

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++  I   C      EA+ V   M + G  P+  ++ +++ SLCK  R+ EA E++DQ 
Sbjct: 262 VYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQA 321

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK-PDVYTYTAVMDGFCKVGR 240
               C P +     L+ GLC   RVEEA  +L  +   G + P V TY+AV+DG CK  R
Sbjct: 322 MERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADR 381

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++A  +L +    G  P+VVT+  + + +CK G   +   L + M +R C  D ++Y+ 
Sbjct: 382 LDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNI 441

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L+ G  +  K+  A+++ +EM   G + +   +++++ GLC +S      +E+A  + EK
Sbjct: 442 LIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESR-----VEEARLLMEK 496

Query: 361 MT-KKVSVTDP 370
           M  + +  +DP
Sbjct: 497 MNFESLPDSDP 507



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 172/365 (47%), Gaps = 8/365 (2%)

Query: 107 FFSEASSY-GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
           FF  A +  G   N++T + ++  + N     EA +V        + P+  T+  L+   
Sbjct: 3   FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGF 62

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
           CK+ ++ +A+ +L +M   G  P I T+  L++ LC +   ++A ++   + +  +KPD 
Sbjct: 63  CKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDA 122

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           + YT V+   CK+ + + A       ++ G  P+ VT+  L +   K     +G  + + 
Sbjct: 123 FLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEE 182

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           M  +   P+ ++Y+T++NG  K G+I  A+S+ + +   G      + ++L+ GLC    
Sbjct: 183 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLC---- 238

Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
            + D  ++A ++FE     V   D   Y   I  L K  K DEA       IE G  P  
Sbjct: 239 -KHDRHDEARELFEMAAGDVQ--DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDP 295

Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
           +++N +I +LC + ++ +A  L+    E   +P      +L+  L +  +  +AC +   
Sbjct: 296 VSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILER 355

Query: 466 ALKQG 470
            L+ G
Sbjct: 356 MLETG 360



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 134/326 (41%), Gaps = 40/326 (12%)

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            R G + N  T N LL+     G   EAY +  +      +PD +TY  ++ GFCK  + 
Sbjct: 9   ARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQI 68

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A+ LL E    G+TP +VTF +L    C+     K + +   M      PD   Y+ +
Sbjct: 69  PQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVV 128

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEK 360
           +  L K  K+  A S F+ MV+ G   D+     L+  L     WE+       +Q+FE+
Sbjct: 129 IGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQ------GHQIFEE 182

Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALI--------------------------HLH 394
           M  K    +  TY  V+    K  + D+AL                           H  
Sbjct: 183 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 242

Query: 395 H-------AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
           H        +  G +   I + + I  LC  GK+D+A  +   M E    P   SY+++I
Sbjct: 243 HDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVII 302

Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
             L +  +  +A  L   A+++  +P
Sbjct: 303 YSLCKDNRVSEAKELMDQAMERKCMP 328



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 16/171 (9%)

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             +W K RP           GF+ +    NSLL     + +       +AY+VF+     
Sbjct: 3   FFQWAKARP-----------GFQHNTYTCNSLL-----EVFVNDGCHREAYRVFKDELVT 46

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +   D  TYG +IR   K ++  +A+  L      G  P  +TF ++I+ LC     DKA
Sbjct: 47  LFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKA 106

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           L +   M +    P    Y ++I  L ++ K   A + +   ++ G +P +
Sbjct: 107 LQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDK 157



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 5/176 (2%)

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           ++LL   +  G  R A  +FK+ +   F  D+    +L+RG C     + + +  A  + 
Sbjct: 21  NSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFC-----KAEQIPQAVNLL 75

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
            +M          T+G +IR L +   TD+AL   H  I+M   P    +  VI  LC  
Sbjct: 76  GEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKI 135

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            K+D A      M +   +P + +Y +L+  L +  K      ++   L +G  P+
Sbjct: 136 NKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 191/400 (47%), Gaps = 20/400 (5%)

Query: 35  ASLSTAESLDLKENPRSLQAQRFVDR------------IKASPLKERIDIFDSIKKDGTN 82
           ++L  AE +DL E       +R V               K   L++  D+   I+  G  
Sbjct: 158 SALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLA 217

Query: 83  WSVSDFNDLLMALVMLNEQETAVK---FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
            SV  +N ++                    E    G++PN  TF++++  YC  ++   A
Sbjct: 218 PSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAA 277

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            +V + M   G   +V T++ LV  LC  G+++E ++++D+M  +G  PN+ T N +L G
Sbjct: 278 VRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNG 337

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C  G + +A   + +++   +KP+V TYT ++DG+ ++ +  +A+ +      +GV PN
Sbjct: 338 FCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPN 397

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
              +N L  G+ + G      GLL  M+ +    D ++Y+ L+  L   G++R AV +  
Sbjct: 398 ARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLD 457

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM+  G E      N+++ G C     EK  ++ AY++  +M K     +  TY + I+ 
Sbjct: 458 EMLMVGLEPVHLTYNTIINGYC-----EKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKC 512

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
           L +  K +E    L+  +E G +P  +T++ + + +  +G
Sbjct: 513 LCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKG 552



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 187/394 (47%), Gaps = 10/394 (2%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           S    N LL ALV     + A + F  A    ++P+ +TF+I+I   C      +A  V 
Sbjct: 149 SAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVA 208

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV---LDQMGRIGCKPNIQTYNCLLKGL 200
             +   G  P+V T+  +++  CK GR      V   L +M   G  PN  T+N L+ G 
Sbjct: 209 KDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGY 268

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
           C       A  +   +K  G+   V TY+A++ G C  G+  E ++L++E  + G+ PN+
Sbjct: 269 CKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNL 328

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            T N++ NG+CK+G      G +  M+++N  P+ ++Y+ L++G  +  K++ A+++ + 
Sbjct: 329 ATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEA 388

Query: 321 MVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           M   G   + R+ N L+ G      W     L D      +M  K    D  TY ++I  
Sbjct: 389 MSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLD------EMRMKGVRADIVTYNVLIGA 442

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
           L    +  +A+  L   + +G  P  +T+N +I   C +G I  A  +   M +  K  +
Sbjct: 443 LCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRAN 502

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y++ I  L ++ K  +   L    L++G++P
Sbjct: 503 VVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVP 536



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 136/276 (49%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +F+ +K+ G   SV  ++ L+  L    + E  VK   E    GL PN  T + ++  
Sbjct: 278 VRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNG 337

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C K    +A   ID M      PNV T+TILV+   +  ++K+AL V + M   G +PN
Sbjct: 338 FCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPN 397

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
            + YNCL+ G    G       +L  ++  G++ D+ TY  ++   C  G   +A++LL+
Sbjct: 398 ARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLD 457

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           E +  G+ P  +T+NT+ NGYC++G       +   M+K     + ++Y+  +  L + G
Sbjct: 458 EMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMG 517

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
           K+     +  EM+  G   +    +++  G+  K +
Sbjct: 518 KMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGY 553



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 125/290 (43%), Gaps = 37/290 (12%)

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +P+  + N LL  L    RV+ A           + PD++T+  V+ G CK G+  +A +
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           +  +    G+ P+VVT+NT+ +GYCK G                                
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRG-------------------------------- 234

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           + G++    ++ KEMV  G   +E   N L+ G C  S         A +VFE+M ++  
Sbjct: 235 RAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAA-----AVRVFEEMKQQGI 289

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
                TY  ++  L    K +E +  +    ++G +P   T N+V+   C +G +  A  
Sbjct: 290 AASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEG 349

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
            +  M +    P+  +Y +L+    +L+K  DA A+  A   +GV P  +
Sbjct: 350 WIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNAR 399


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 184/397 (46%), Gaps = 4/397 (1%)

Query: 77  KKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDF 136
           K  G + +V  +N ++  L    E   A   F E    G+ P+  T++ +I   C     
Sbjct: 219 KSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAM 278

Query: 137 FEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCL 196
            +A  V+  M  NG+ PN  T+  +++    SG+ KE   +  +M   G  PNI T N  
Sbjct: 279 DKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSY 338

Query: 197 LKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV 256
           +  LC  G+ +EA E   ++   G KP++ TY+ ++ G+   G   + + L N     G+
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGI 398

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
             +   FN + + Y K G   + + +   M+++  +PD  +Y  ++    + G++  A+ 
Sbjct: 399 VADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMD 458

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
            F +M+  G + +  + +SL++G CM      +L++    V E M++ +   +   +  +
Sbjct: 459 KFNQMIAMGLKPEGIVYHSLIQGFCMHG----NLVKAKELVSEMMSRGIPRPNIVFFNSI 514

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I +L K  +  EA       I +G  P  ITFN++I      GKI+KA  +L  M     
Sbjct: 515 INSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGI 574

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            P   SY+ LI    +  +  D   L+G  L +GV P
Sbjct: 575 EPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKP 611



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 187/368 (50%), Gaps = 14/368 (3%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E + IF  +++ G       +  ++ A   +     A+  F++  + GL P   
Sbjct: 414 KRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGI 473

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGY-HPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +  +I+ +C   +  +A++++  M   G   PN+  F  ++NSLCK GR+ EA ++ D 
Sbjct: 474 VYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDF 533

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           +  IG +P++ T+N L+ G   VG++E+A+ +L  + + G++PDV +Y  ++DG+C+ GR
Sbjct: 534 VIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGR 593

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++ + L  E + +GV P  +T+  + +G   +G  +    +   M +     D  +   
Sbjct: 594 IDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGI 653

Query: 301 LLNGLLKWGKIRPAVSIFKEM----VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           +L GL +      A+++FK++    V+F   +   M++++ +   ++  EE      A +
Sbjct: 654 ILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYK---VRKREE------AKE 704

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
           +F+ ++    V +  TYG++I+ L K    +EA        + G  P +   N +I+ L 
Sbjct: 705 LFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLL 764

Query: 417 GEGKIDKA 424
            +G+I KA
Sbjct: 765 EKGEIVKA 772



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 188/390 (48%), Gaps = 8/390 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + +++F+S++ +G       FN ++ A       +  +  F++    G+ P++ T+ I+I
Sbjct: 385 DMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVI 444

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC- 186
             +       +A    + M   G  P    +  L+   C  G L +A E++ +M   G  
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIP 504

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           +PNI  +N ++  LC  GRV EA+++   V + G +PDV T+ +++DG+  VG+  +A  
Sbjct: 505 RPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFG 564

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           +L+  I  G+ P+VV++NTL +GYC+ G    G+ L   M  +   P  I+Y  +L+GL 
Sbjct: 565 VLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLF 624

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
             G+   A  +  EM+  G  +D      +L GLC  + ++     +A  +F+K+     
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDD-----EAIAMFKKLGAMNV 679

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             +      +I  + K +K +EA          G +P   T+  +I+ L  EG +++A  
Sbjct: 680 KFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADN 739

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
           +  LM +    PS    + +I  L  LEK 
Sbjct: 740 MFSLMEKSGCAPSSRLLNYIIRVL--LEKG 767



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 186/408 (45%), Gaps = 6/408 (1%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
           KE   +F  +   G   ++   N  + +L    + + A +FF   ++ G  PN  T+S++
Sbjct: 314 KETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVL 373

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  Y  +  F +   + + M  NG   +   F I++++  K G + E + +  QM   G 
Sbjct: 374 LHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGV 433

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P+  TY  ++     +GR+ +A +    +   GLKP+   Y +++ GFC  G   +A E
Sbjct: 434 IPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKE 493

Query: 247 LLNEAIERGVT-PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           L++E + RG+  PN+V FN++ N  CKEG  ++   +   +      PD I++++L++G 
Sbjct: 494 LVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGY 553

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
              GKI  A  +   M+  G E D    N+L+ G C         ++D   +F +M  K 
Sbjct: 554 GLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGR-----IDDGLILFGEMLSKG 608

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
                 TYGI++  L    +T  A    H  IE G      T   ++  LC     D+A+
Sbjct: 609 VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAI 668

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +   +       +    + +I  + ++ K  +A  L+ +    G++P
Sbjct: 669 AMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVP 716



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 174/411 (42%), Gaps = 46/411 (11%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++F  + + G    V  +  ++ AL      + A     +  S G  PN  T++ MI  Y
Sbjct: 248 NLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGY 307

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
                + E   +   M   G  PN+ T    ++SLCK G+ KEA E  D M   G KPN+
Sbjct: 308 SISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNL 367

Query: 191 QTYNCLLKGL----CYV-------------------------------GRVEEAYEMLMN 215
            TY+ LL G     C+V                               G ++E   +   
Sbjct: 368 VTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQ 427

Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
           ++  G+ PD  TY  V+  F ++GR  +AM+  N+ I  G+ P  + +++L  G+C  G 
Sbjct: 428 MQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGN 487

Query: 276 PMKGVGLLKLMKKRNC-LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
            +K   L+  M  R    P+ + +++++N L K G++  A  IF  ++  G   D    N
Sbjct: 488 LVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFN 547

Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
           SL+ G  +    EK     A+ V + M       D  +Y  +I    +  + D+ LI   
Sbjct: 548 SLIDGYGLVGKIEK-----AFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFG 602

Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             +  G  P TIT+  ++  L  +G+   A  +      H  I S T+ D+
Sbjct: 603 EMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMC-----HEMIESGTTMDI 648



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 164/394 (41%), Gaps = 43/394 (10%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC-YCNKNDFFEARKV 142
           +V  +N L+               F      GL  +    SI+++C Y  K        +
Sbjct: 118 TVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLL 177

Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI--GCKPNIQTYNCLLKGL 200
           +  M + G  P+  ++  +V +LC+  R + AL++L  M +   GC PN+ TYN ++ GL
Sbjct: 178 LHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGL 237

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
              G V +A  +   +   G+ PDV TYT+++D  CK    ++A  +L + I  G  PN 
Sbjct: 238 FREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNK 297

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
           VT+N + +GY   G   +  G+ + M  +  +P+ ++ ++ ++ L K GK + A   F  
Sbjct: 298 VTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDS 357

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M   G + +    + LL G     +  +    D   +F  M     V D   + IVI   
Sbjct: 358 MAAKGHKPNLVTYSVLLHG-----YATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAY 412

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
           GK                                    G +D+ +L+   M E   IP  
Sbjct: 413 GK-----------------------------------RGMMDETMLIFTQMQEQGVIPDA 437

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
            +Y ++I    ++ +  DA   +   +  G+ P+
Sbjct: 438 CTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPE 471



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 8/227 (3%)

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           EA  R   P V T+N L +  C+   P  G  L     K     D I  S LL  L    
Sbjct: 109 EARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAK 168

Query: 310 KIRPAVS-IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           +    V+ +   M   G E D    N++++ LC  S  ++     A  +   M KK    
Sbjct: 169 RSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQR-----ALDLLHTMVKKSGGC 223

Query: 369 DPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
            P   TY  VI  L +  +  +A    H  ++ G +P  +T+ ++I ALC    +DKA L
Sbjct: 224 SPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAEL 283

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           +L  M  +   P++ +Y+ +I       +  +   ++     QG++P
Sbjct: 284 VLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMP 330



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 78/171 (45%)

Query: 78  KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
           + GT   +S    +L  L   N  + A+  F +  +  +  N    + MI          
Sbjct: 641 ESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKRE 700

Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
           EA+++ D +   G  PN +T+ +++ +L K G ++EA  +   M + GC P+ +  N ++
Sbjct: 701 EAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYII 760

Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           + L   G + +A   +  V    +  +  T + +M  F + G+  E ++LL
Sbjct: 761 RVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLL 811



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 17/188 (9%)

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            LFN  C+E             + R  LP   +Y+ L++   +  +     ++F   ++ 
Sbjct: 100 ALFNRICREEA-----------RPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKT 148

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G ++D  + + LL+  C+   +  D + +   +  +M +     D  +Y  V++TL +  
Sbjct: 149 GLKMDVIVASILLK--CLYHAKRSDDVVNL--LLHRMPELGVEPDTISYNTVVKTLCEDS 204

Query: 385 KTDEALIHLHHAIEM--GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
           ++  AL  LH  ++   G  P  +T+N VI  L  EG++ KA  L   M +   +P   +
Sbjct: 205 RSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVT 264

Query: 443 YDMLITKL 450
           Y  +I  L
Sbjct: 265 YTSIIDAL 272



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/277 (18%), Positives = 103/277 (37%), Gaps = 36/277 (12%)

Query: 43  LDLKENPRSLQAQRFVDRIK-ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
           + + E P  +     +D       +++   + D++   G    V  +N L+         
Sbjct: 535 IHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRI 594

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           +  +  F E  S G+ P + T+ I++    N      A+K+   M ++G   +++T  I+
Sbjct: 595 DDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGII 654

Query: 162 VNSLCKSG-----------------------------------RLKEALEVLDQMGRIGC 186
           +  LC++                                    + +EA E+ D +   G 
Sbjct: 655 LGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGL 714

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            PN  TY  ++K L   G VEEA  M   ++  G  P       ++    + G   +A  
Sbjct: 715 VPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGN 774

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            + +   + ++    T + L   + +EG   + V LL
Sbjct: 775 YMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLL 811


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 191/395 (48%), Gaps = 13/395 (3%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           +  FN +L +   +    T V         G+ P+ +T +I+I C+C+         V+ 
Sbjct: 59  IIQFNKILDSFAKMKHYST-VSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLA 117

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            +   GY P+  T   L+  LC  G++K+AL   D++   G + N   Y  L+ G+C +G
Sbjct: 118 KILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIG 177

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
               A ++L  +     KPDV  Y+ ++D  CK    +EA  L +E   +G++ +VVT+N
Sbjct: 178 DTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYN 237

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV-------SI 317
           TL  G+C  G   + +GLL +M  +   PD  +Y+ L++ L K GK++ A         +
Sbjct: 238 TLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDL 297

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
             EM   G   D    +SL+ GLC     +   L+ A  +F KM  +    +  T+ I++
Sbjct: 298 IDEMRDRGQPADVITYSSLIDGLC-----KNGHLDRAIALFNKMKDQGIRPNMFTFTILL 352

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L KG +  +A       +  G+     T+N +I   C +G +++AL +L  M ++  I
Sbjct: 353 DGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCI 412

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
           P+  +++ +I  L + +++  A  L    + +G++
Sbjct: 413 PNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 447



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 196/429 (45%), Gaps = 17/429 (3%)

Query: 8   NSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLK 67
           +SF+  +++   H++ P    +     A       L ++  P  +Q  + +D        
Sbjct: 19  SSFLQNSSHSHFHSQPPSIQNV---DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHY 75

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
             + +   ++  G    +   N L+     + +        ++    G  P++ T + +I
Sbjct: 76  STVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLI 135

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGC 186
           +  C K    +A    D +   G+  N   +  L+N +CK G  + A+++L ++ GR+  
Sbjct: 136 KGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRL-T 194

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
           KP++  Y+ ++  LC    V EAY +   +   G+  DV TY  ++ GFC VG+  EA+ 
Sbjct: 195 KPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIG 254

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV-------GLLKLMKKRNCLPDKISYS 299
           LLN  + + + P+V T+  L +  CKEG   +          L+  M+ R    D I+YS
Sbjct: 255 LLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYS 314

Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
           +L++GL K G +  A+++F +M   G   +      LL GL    W+    L+DA +VF+
Sbjct: 315 SLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGL----WKGGR-LKDAQEVFQ 369

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
            +  K    +  TY ++I    K    +EAL  L    + G IP   TF  +I AL  + 
Sbjct: 370 DLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKD 429

Query: 420 KIDKALLLL 428
           + DKA  LL
Sbjct: 430 ENDKAEKLL 438



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 4/164 (2%)

Query: 62  KASPLKERI----DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA 117
           K    K RI    D+ D ++  G    V  ++ L+  L      + A+  F++    G+ 
Sbjct: 283 KVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIR 342

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN +TF+I++          +A++V   +   GYH NV T+ +++N  CK G L+EAL +
Sbjct: 343 PNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTM 402

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           L +M   GC PN  T+  ++  L      ++A ++L  +   GL
Sbjct: 403 LSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 446


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 159/337 (47%), Gaps = 6/337 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTILVNSLCKSGRLKE 173
           G+APN +T+  +I  +C      EA KV D M   G   P    +  L+   C  G+L  
Sbjct: 216 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 275

Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
           AL   D+M   G    + TYN L+  L   GR  EAYE++  +   GL  DV+TY  +++
Sbjct: 276 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILIN 335

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
           G CK G   +A+E+      RGV   VVT+ +L     K+G   +   L     +R   P
Sbjct: 336 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 395

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           D + Y+ L+N     G I  A  I  EM +     D+   N+L+RGLC+        +++
Sbjct: 396 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR-----VDE 450

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A ++ ++MTK+    D  TY  +I          +AL   +  +  G  P  +T+N +IQ
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 510

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
            LC  G+ D A  ++  M E+   P  ++Y  LI  L
Sbjct: 511 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 547



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 165/318 (51%), Gaps = 6/318 (1%)

Query: 102 ETAVKFFSEASSYG-LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
           + AVK F E  + G + P +  ++ +I  YC++     A    D M + G    V T+ +
Sbjct: 238 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 297

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           LV++L   GR  EA E++++MG  G   ++ TYN L+ G C  G V++A E+  N+   G
Sbjct: 298 LVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRG 357

Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
           ++  V TYT+++    K G+  E  +L +EA+ RG+ P++V +N L N +   G   +  
Sbjct: 358 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 417

Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            ++  M+K+   PD ++Y+TL+ GL   G++  A  +  EM + G + D    N+L+ G 
Sbjct: 418 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 477

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
            MK       ++DA ++  +M  K       TY  +I+ L K  + D+A   +   +E G
Sbjct: 478 SMKGD-----VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 532

Query: 401 HIPRTITFNNVIQALCGE 418
             P   T+ ++I+ L  E
Sbjct: 533 ITPDDSTYISLIEGLTTE 550



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 148/276 (53%)

Query: 74  DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
           D + + G   +V+ +N L+ AL M      A +   E    GLA + +T++I+I  +C +
Sbjct: 281 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKE 340

Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
            +  +A ++ + M   G    V T+T L+ +L K G+++E  ++ D+  R G +P++  Y
Sbjct: 341 GNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 400

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N L+      G ++ A+E++  ++   + PD  TY  +M G C +GR +EA +L++E  +
Sbjct: 401 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTK 460

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
           RG+ P++VT+NTL +GY  +G     + +   M  +   P  ++Y+ L+ GL K G+   
Sbjct: 461 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 520

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
           A ++ KEMV  G   D+    SL+ GL  +     D
Sbjct: 521 AENMVKEMVENGITPDDSTYISLIEGLTTEDERAID 556



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 199/462 (43%), Gaps = 50/462 (10%)

Query: 49  PRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFF 108
           P SL            P    + ++  +K      S +  + LL AL        A   F
Sbjct: 87  PSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSAL----PSAPAFALF 142

Query: 109 SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS 168
           ++     L   + TF+IM+R  C+      A +++  M      PN  T+  ++   C  
Sbjct: 143 ADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSR 198

Query: 169 GRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG-LKPDVY 226
           GR++ AL+++ +M  R G  PN  TY  ++ G C VGRV+EA ++   +   G +KP+  
Sbjct: 199 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 258

Query: 227 TYTAVMDGFCKVG-----------------------------------RSNEAMELLNEA 251
            Y A++ G+C  G                                   R  EA EL+ E 
Sbjct: 259 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 318

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             +G+  +V T+N L NG+CKEG   K + + + M +R      ++Y++L+  L K G++
Sbjct: 319 GGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQV 378

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
           +    +F E VR G   D  + N+L+      S      ++ A+++  +M KK    D  
Sbjct: 379 QETDKLFDEAVRRGIRPDLVLYNALI-----NSHSTSGNIDRAFEIMGEMEKKRIAPDDV 433

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           TY  ++R L    + DEA   +    + G  P  +T+N +I     +G +  AL +   M
Sbjct: 434 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 493

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                 P+  +Y+ LI  L +  +  DA  +    ++ G+ P
Sbjct: 494 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 535



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 154/320 (48%), Gaps = 6/320 (1%)

Query: 62  KASPLKERIDIFDSIKKDG-TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           K   + E + +FD +   G        +N L+       + +TA+ +       G+A   
Sbjct: 233 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 292

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T+++++          EA ++++ M   G   +V T+ IL+N  CK G +K+ALE+ + 
Sbjct: 293 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFEN 352

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
           M R G +  + TY  L+  L   G+V+E  ++       G++PD+  Y A+++     G 
Sbjct: 353 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 412

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            + A E++ E  ++ + P+ VT+NTL  G C  G   +   L+  M KR   PD ++Y+T
Sbjct: 413 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 472

Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
           L++G    G ++ A+ I  EM+  GF       N+L++GLC          +DA  + ++
Sbjct: 473 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG-----DDAENMVKE 527

Query: 361 MTKKVSVTDPGTYGIVIRTL 380
           M +     D  TY  +I  L
Sbjct: 528 MVENGITPDDSTYISLIEGL 547



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 112/212 (52%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   +K+ ++IF+++ + G   +V  +  L+ AL    + +   K F EA   G+ P+  
Sbjct: 339 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV 398

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I  +    +   A +++  M      P+  T+  L+  LC  GR+ EA +++D+M
Sbjct: 399 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 458

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G +P++ TYN L+ G    G V++A  +   + N G  P + TY A++ G CK G+ 
Sbjct: 459 TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 518

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
           ++A  ++ E +E G+TP+  T+ +L  G   E
Sbjct: 519 DDAENMVKEMVENGITPDDSTYISLIEGLTTE 550


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 169/334 (50%), Gaps = 11/334 (3%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN   F+ +I      N   +A + ++ M D G HP+V TFT L+   CK+  ++ A E+
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 178 LDQMGRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMDGF 235
             +M +   C+P+   Y  L+ G C   R++ A E+L  ++ +  ++PDV  Y +++DG 
Sbjct: 69  FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128

Query: 236 CKVGRSNEAMELLNEAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           C+  R  EA + L+E + R G +P VVT+ +L  G CK       + +   M +R   P 
Sbjct: 129 CRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPT 188

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            +SYS +++GL K G++  A  + +EM   G E++  +  +L+ GLC     +   L+DA
Sbjct: 189 IVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLC-----KSGFLDDA 243

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT-FNNVIQ 413
           Y ++  M +  +  +  TY  +I T  +  +T+ AL    H  +  + P  +  +  V+ 
Sbjct: 244 YALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRD--YCPLDVAMYTAVVS 301

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            LC E ++D A  L   M          +Y++L+
Sbjct: 302 GLCRERRLDDARALFREMRLAGVSADTHAYNVLL 335



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 184/415 (44%), Gaps = 52/415 (12%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI---- 143
           F  L+ AL   N    A +        G+ P+  TF+ +IR +C       A ++     
Sbjct: 14  FASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEIFQEMI 73

Query: 144 -------DC----MFDNGY----------------------HPNVTTFTILVNSLCKSGR 170
                  DC    +  +GY                       P+V  +  +V+ LC+S R
Sbjct: 74  KSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNR 133

Query: 171 LKEALEVLDQ-MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
             EA + LD+ M R GC P + TY  L++G C   +++ A  +   +    ++P + +Y+
Sbjct: 134 FLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYS 193

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++DG  K GR  +A  ++ E    G   NVV + TL +G CK G       L ++MK+ 
Sbjct: 194 VIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRS 253

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P++ +Y+TL++   +  +   A+ +F + +R    +D  M  +++ GLC      + 
Sbjct: 254 GAFPNQRTYATLIDTFCRNDRTETALGLF-DHIRDYCPLDVAMYTAVVSGLC-----RER 307

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH-AIEMGHIPRTITF 408
            L+DA  +F +M       D   Y +++    +  +++EA   L     + G +   +T+
Sbjct: 308 RLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTY 367

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKSYDAC 460
           N VI   C    ++  ++L + M +    P   +Y  LI +L    ++ +++D C
Sbjct: 368 NTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLC 418



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 155/345 (44%), Gaps = 16/345 (4%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           +N ++  L   N    A KF  E     G +P   T++ +IR  C       A  + + M
Sbjct: 121 YNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAM 180

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            +    P + +++++++ L K+GR+ +A  V+ +M  +GC+ N+  Y  L+ GLC  G +
Sbjct: 181 LERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFL 240

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP-NVVTFNT 265
           ++AY +   +K  G  P+  TY  ++D FC+  R+  A+ L +    R   P +V  +  
Sbjct: 241 DDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI--RDYCPLDVAMYTA 298

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF- 324
           + +G C+E        L + M+      D  +Y+ LL+G  + G+   A  I +E+    
Sbjct: 299 VVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDP 358

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI-RTLGKG 383
           G   +    N+++ G C         LE    +F +M ++    D  TY  +I R LG G
Sbjct: 359 GCVANLLTYNTVIAGCC---------LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSG 409

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
            +   A       +  G  P +     V+  LC   + D A  L+
Sbjct: 410 -EIRRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKLI 453



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 144/334 (43%), Gaps = 56/334 (16%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R L+A +F+D              +++ + G + +V  +  L+       + + A+  ++
Sbjct: 133 RFLEAWKFLD--------------ETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWN 178

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
                 + P   ++S++I         ++A +V+  M   G   NV  +T L++ LCKSG
Sbjct: 179 AMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSG 238

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLL-------------------------------- 197
            L +A  +   M R G  PN +TY  L+                                
Sbjct: 239 FLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPLDVAMYTA 298

Query: 198 --KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE-AIER 254
              GLC   R+++A  +   ++  G+  D + Y  ++ G  + GRS EA  +L E   + 
Sbjct: 299 VVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDP 358

Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
           G   N++T+NT+  G C E     G+ L   M++R   PD  +YS L++ LL  G+IR A
Sbjct: 359 GCVANLLTYNTVIAGCCLE----SGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRA 414

Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
             + +EM+  G      ++  ++  LC   W  +
Sbjct: 415 FDLCEEMLASGLSPPSGVLGRVVARLC---WSRR 445



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 41/239 (17%)

Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
           P+ + + +++D   K  R  +A   L    + G+ P+VVTF  L  G+CK     +   +
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 283 LKLMKKRN-CLPDKISYSTLLNGLLKWGKIRPAVSIFKEM-VRFGFEVDERMMNSLLRGL 340
            + M K N C PD   Y  L++G  K  ++  A+ + +EM V    + D  + NS++ GL
Sbjct: 69  FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128

Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
           C  +                                 R L   K  DE ++        G
Sbjct: 129 CRSN---------------------------------RFLEAWKFLDETMVR------QG 149

Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
             P  +T+ ++I+  C   K+  A+ +   M E    P+  SY ++I  L +  + YDA
Sbjct: 150 CSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDA 208


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 136/249 (54%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E     D + K G       ++ L+  L+ +N+ E A++F+ +    G+ P+ +T+S+
Sbjct: 548 LDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSV 607

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI   C      E +K+ D M  N   PN   +  L+ + C+SGRL  ALE+ + M   G
Sbjct: 608 MIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKG 667

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             PN  TY  L+KG+  + RVEEA  +L  ++ +GL+P+V+ YTA++DG+ K+G+  +  
Sbjct: 668 ISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 727

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL E   + V PN +T+  +  GY ++G   +   LL  M+++  +PD I+Y   + G 
Sbjct: 728 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGY 787

Query: 306 LKWGKIRPA 314
           LK G +  A
Sbjct: 788 LKQGGVLQA 796



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 212/476 (44%), Gaps = 41/476 (8%)

Query: 33  AAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLL 92
           A ASLS     +++     L  + +  + K       +D+F  +   G   S +  N LL
Sbjct: 166 AMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILL 225

Query: 93  MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
            +LV   E +   + F      G++P+ + F+  I  +C      EA ++   M + G  
Sbjct: 226 TSLVRATEFQKCCEAFHVVCK-GVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVV 284

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           PNV T+  +++ L  SGR  EA    ++M   G +P + TY+ L+KGL    R+ +AY +
Sbjct: 285 PNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCV 344

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +   G  P+V  Y  ++D   + G  N+A+E+ +  + +G++    T+NTL  GYCK
Sbjct: 345 LKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 404

Query: 273 EGTPMKGVGLLKLMKK-----------------------------------RNCLPDKIS 297
            G       LLK M                                     RN  P    
Sbjct: 405 SGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGL 464

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
            +TL++GL K GK   AV ++ + +  GF VD +  N+LL GLC     E   LE+ +++
Sbjct: 465 LTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLC-----EAGKLEEGFRI 519

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
            +++  +  V D  +Y  +I      KK DEA + +   ++ G  P   T++ +I+ L  
Sbjct: 520 QKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLN 579

Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             K+++A+        +  IP   +Y ++I    + E++ +   L+   +   + P
Sbjct: 580 MNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQP 635



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 181/386 (46%), Gaps = 5/386 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E I++F  +++ G   +V  +N ++  L M    + A  F  +    G+ P   
Sbjct: 264 KGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLI 323

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+SI+++         +A  V+  M + G+ PNV  +  L++SL ++G L +A+E+ D M
Sbjct: 324 TYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLM 383

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G      TYN L+KG C  G+ + A  +L  + + G   +  ++T+V+   C     
Sbjct: 384 VSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMF 443

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+  + E + R ++P      TL +G CK G   K V L      +  L D  + + L
Sbjct: 444 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNAL 503

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           L+GL + GK+     I KE++  GF +D    N+L+ G C         L++A+   ++M
Sbjct: 504 LHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKK-----LDEAFMFMDEM 558

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            KK    D  TY I+IR L    K +EA+         G IP   T++ +I   C   + 
Sbjct: 559 VKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERT 618

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI 447
           ++   L   M  +   P+   Y+ LI
Sbjct: 619 EEGQKLFDEMMSNNLQPNTVVYNHLI 644



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 159/335 (47%), Gaps = 5/335 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L+  L    +   AV+ + +  + G   ++ T + ++   C      E  ++   +   G
Sbjct: 468 LISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRG 527

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
           +  +  ++  L++  C + +L EA   +D+M + G KP+  TY+ L++GL  + +VEEA 
Sbjct: 528 FVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAI 587

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           +   + K +G+ PDVYTY+ ++DG CK  R+ E  +L +E +   + PN V +N L   Y
Sbjct: 588 QFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAY 647

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C+ G     + L + MK +   P+  +Y++L+ G+    ++  A  + +EM   G E + 
Sbjct: 648 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNV 707

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
               +L+ G     + +   +     +  +M  K    +  TY ++I    +     EA 
Sbjct: 708 FHYTALIDG-----YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 762

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
             LH   E G +P +IT+   I     +G + +A 
Sbjct: 763 RLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAF 797



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 181/426 (42%), Gaps = 48/426 (11%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           I+A  L + I+I D +   G + + S +N L+       + + A +   E  S G   N 
Sbjct: 368 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQ 427

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            +F+ +I   C+ + F  A + +  M      P     T L++ LCK G+  +A+E+  +
Sbjct: 428 GSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLK 487

Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYE----------------------------- 211
               G   + +T N LL GLC  G++EE +                              
Sbjct: 488 FLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKK 547

Query: 212 -----MLMN-VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
                M M+ +   GLKPD YTY+ ++ G   + +  EA++   +    G+ P+V T++ 
Sbjct: 548 LDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSV 607

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + +G CK     +G  L   M   N  P+ + Y+ L+    + G++  A+ + ++M   G
Sbjct: 608 MIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKG 667

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              +     SL++G+ + S      +E+A  + E+M  ++   +P  +       G GK 
Sbjct: 668 ISPNSATYTSLIKGMSIISR-----VEEAKLLLEEM--RMEGLEPNVFHYTALIDGYGKL 720

Query: 386 TD----EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
                 E L+   H+  +   P  IT+  +I     +G + +A  LL  M E   +P   
Sbjct: 721 GQMVKVECLLREMHSKNVH--PNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSI 778

Query: 442 SYDMLI 447
           +Y   I
Sbjct: 779 TYKEFI 784



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 191/474 (40%), Gaps = 54/474 (11%)

Query: 47  ENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           +    + + R +    +S L +R   ++  K+  T  S  +F+ L          +TA+ 
Sbjct: 41  DKSEEISSDRHLHERLSSVLSKRSLDYEQCKQLITVLSPHEFDRLFPEFRFKVNPKTALD 100

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYC-------NKNDFFEARKVIDCMFDNGYHP------ 153
           FF       LA +S++FS  +R YC       + N    AR V+  +  NG  P      
Sbjct: 101 FFR------LASDSFSFSFSLRSYCLLIGLLLDANLSSPARVVLIRLI-NGNVPVLPCGN 153

Query: 154 ------NVTTFTILVN-SLCKSGRLKE---------------------ALEVLDQMGRIG 185
                  V     + + SLC    ++                      AL+V   +   G
Sbjct: 154 GGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKG 213

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  T N LL  L      ++  E   +V   G+ PDVY +T  ++ FCK G+  EA+
Sbjct: 214 MFPSKTTCNILLTSLVRATEFQKCCEAF-HVVCKGVSPDVYLFTTAINAFCKGGKVEEAI 272

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           EL ++  E GV PNVVT+NT+ +G    G   +     + M +R   P  I+YS L+ GL
Sbjct: 273 ELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGL 332

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K  +I  A  + KEM   GF  +  + N+L+  L      E   L  A ++ + M  K 
Sbjct: 333 TKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLI-----EAGSLNKAIEIKDLMVSKG 387

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
                 TY  +I+   K  + D A   L   + +G      +F +VI  LC     D AL
Sbjct: 388 LSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSAL 447

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQD 479
             +  M      P       LI+ L +  K   A  L+   L +G +   K  +
Sbjct: 448 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSN 501


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 198/408 (48%), Gaps = 8/408 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   + +FDS++  G       ++ L+   V  N  + A+    E  SY + P++  ++ 
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234

Query: 126 MIRCYCNKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           ++       +F +A +V + +  D G  PN+ T+ ++++ LCK G  KEA +V ++M   
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
             +P++ TY  ++ GLC    V+ A  +   +   GL PDV  Y +++ GFC  GR  EA
Sbjct: 295 NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA 354

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL-PDKISYSTLLN 303
            +  +     G+  NV ++N +  G    G   K   L +L++K + L PD +++ST+++
Sbjct: 355 WKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIH 413

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
           GL + G    ++ I +E    G E+DE   +S++ GLC     +   L+DA +++EK++ 
Sbjct: 414 GLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLC-----KDGRLDDAVKLYEKISM 468

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
                +   Y  +I    +  K  +A+       E    P TIT+N +I  LC   K  +
Sbjct: 469 DSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLE 528

Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
           A      M E   +    +Y  LI  L + +K   A AL+   L +G+
Sbjct: 529 ASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGL 576



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 194/458 (42%), Gaps = 77/458 (16%)

Query: 88  FNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           +N LL       E E A++ + +     G +PN  T+++M+   C    F EA  V + M
Sbjct: 232 YNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERM 291

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
             N + P++ T+  +++ LC+S  +  A  V  +M + G  P++  YN LLKG C+ GRV
Sbjct: 292 VANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRV 351

Query: 207 EEAYEM--------LMNV---------------------------KNDGLKPDVYTYTAV 231
            EA++         + NV                           K+D L PD+ T++ +
Sbjct: 352 GEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTM 411

Query: 232 MDGFCKVGRSNEAMELLNEAIERG-----------------------------------V 256
           + G C+ G +N+++++L EA   G                                    
Sbjct: 412 IHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSF 471

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            PN   +N L NG+C+       + +   M + +C P  I+Y+TL++GL K  K   A  
Sbjct: 472 KPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASR 531

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
             +EM+  G  +D     SL+RGLC         ++ A  ++ ++  K   TD   + I+
Sbjct: 532 FTREMLEKGCMLDVNTYGSLIRGLC-----RDKKIDGALALWNQILDKGLQTDVVMHNIL 586

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           I  L    K DEA   L    E  +  P  +T+N ++      G  DKA  L   + E+ 
Sbjct: 587 IHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENG 646

Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +P   SY+  I  L    ++ +   L    L  G+IP
Sbjct: 647 LVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIP 684



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/418 (22%), Positives = 202/418 (48%), Gaps = 41/418 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            KE  D+++ +  +     +  +  ++  L    + ++A + +SE    GL P+   ++ 
Sbjct: 281 FKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNS 340

Query: 126 MIRCYCNKNDFFEARKVIDCM------------------FDNG----------------- 150
           +++ +C+     EA K  D M                  FD G                 
Sbjct: 341 LLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDS 400

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             P++ TF+ +++ LC+ G   ++L++L++    G + +  +Y+ ++ GLC  GR+++A 
Sbjct: 401 LSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAV 460

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           ++   +  D  KP+ + Y A+++GFC+  + ++A+ + ++  E   +P  +T+NTL +G 
Sbjct: 461 KLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGL 520

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           CK    ++     + M ++ C+ D  +Y +L+ GL +  KI  A++++ +++  G + D 
Sbjct: 521 CKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDV 580

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT-DPGTYGIVIRTLGKGKKTDEA 389
            M N L+ GLC         +++A Q+  +M +K +   +  TY  ++    +    D+A
Sbjct: 581 VMHNILIHGLC-----SAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKA 635

Query: 390 LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
                  +E G +P  I++N  I+ LC   +  + + LL  M     IP+  ++++L+
Sbjct: 636 ASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILV 693



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 1/272 (0%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + I +  +  G       ++ ++  L      + AVK + + S     PNS  ++ +I  
Sbjct: 425 LQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALING 484

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
           +C  + F +A +V   M +N   P   T+  L++ LCK+ +  EA     +M   GC  +
Sbjct: 485 FCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLD 544

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY  L++GLC   +++ A  +   + + GL+ DV  +  ++ G C  G+ +EA +LL+
Sbjct: 545 VNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLS 604

Query: 250 EAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           E  E+    PNVVT+NTL +G+ + G   K   L   + +   +PD ISY+T + GL   
Sbjct: 605 EMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSC 664

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
            +    V +  EM+  G        N L+R +
Sbjct: 665 NRTPEGVQLLNEMLASGIIPTAITWNILVRAV 696



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 163/356 (45%), Gaps = 49/356 (13%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQM--GRIGCK--PNIQTYNCLLKGLCYVGR 205
           G +P V +   L+++  ++ R  +A      +  G  G +  PN+QTYN +L+ LC  G 
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE--------------- 250
           ++ A  +  +++  GL PD  TY+ +M GF K  R + A+ LL+E               
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234

Query: 251 ---------------------AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
                                  + G +PN+ T+N + +G CK G   +   + + M   
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
           N  PD I+Y T+++GL +   +  A  ++ EM++ G   D  + NSLL+G C        
Sbjct: 295 NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFC-----HAG 349

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH--IPRTIT 407
            + +A++ ++ M+    + +  +Y I+++ L  G   D+A   L   +E      P  +T
Sbjct: 350 RVGEAWKFWDSMSVS-GIRNVTSYNIMLKGLFDGGMVDKA-TDLWELLEKDDSLSPDMVT 407

Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           F+ +I  LC +G  +K+L +L       K     SY  +I+ L +  +  DA  LY
Sbjct: 408 FSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLY 463



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 130/252 (51%), Gaps = 1/252 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L + + +++ I  D    +   +N L+      ++   A++ +S+ +    +P + 
Sbjct: 452 KDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTI 511

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I   C    + EA +    M + G   +V T+  L+  LC+  ++  AL + +Q+
Sbjct: 512 TYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQI 571

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGR 240
              G + ++  +N L+ GLC  G+V+EA ++L  +K  +   P+V TY  +MDGF + G 
Sbjct: 572 LDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGC 631

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++A  L    +E G+ P+++++NT   G C      +GV LL  M     +P  I+++ 
Sbjct: 632 FDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNI 691

Query: 301 LLNGLLKWGKIR 312
           L+  ++K+G I+
Sbjct: 692 LVRAVIKYGPIQ 703


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 200/434 (46%), Gaps = 18/434 (4%)

Query: 49  PRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF- 107
           PRS    +   R+ +   ++ +D+FD + + G    +   N  L  +   N      +F 
Sbjct: 17  PRSEGTIQDRARVGSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRFN 76

Query: 108 -FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
             + A +  + P   T+ I+I C C+          +  +   G+      F  L+  LC
Sbjct: 77  RMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLC 136

Query: 167 KSGRLKEALE-VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKP 223
              R  +A++ VL  M  + C PN+ ++  +LKGLC+  R +EA E+L  + +DG    P
Sbjct: 137 ADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLP 196

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V +Y+ V+DG  K G  ++A     E ++R + PNVV ++++    CK     K + + 
Sbjct: 197 NVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVH 256

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M K    P+  +Y++L++G    G++  A+   ++M   G E +    +S +  LC  
Sbjct: 257 DRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLC-- 314

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH----AIEM 399
              +     +A ++F+ M K+    D  TY     +L  G   + AL+ +H      ++ 
Sbjct: 315 ---KNGRCTEARKIFDSMVKRGLKPDITTYS----SLLHGYAIEGALVEMHGLFDLMVQS 367

Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
              P    FN +I A   +GK+D+A+L+   M +    P+  +Y  LI    ++ +  +A
Sbjct: 368 DMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENA 427

Query: 460 CALYGAALKQGVIP 473
            AL+   +  GV P
Sbjct: 428 LALFQEMVSNGVSP 441



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 149/275 (54%), Gaps = 5/275 (1%)

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G  PN  ++S +I       D  +A      M D    PNV  ++ ++ +LCK   + +A
Sbjct: 193 GCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKA 252

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           +EV D+M + G  PN  TY  L+ G C  G++ EA + L  + ++G++P+V TY++ MD 
Sbjct: 253 MEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDY 312

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
            CK GR  EA ++ +  ++RG+ P++ T+++L +GY  EG  ++  GL  LM + +  PD
Sbjct: 313 LCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPD 372

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
              ++TL+    K GK+  A+ +F +M + G + +    ++L+ G C  +      +E+A
Sbjct: 373 HYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITR-----MENA 427

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
             +F++M       +  TY I+++ L +  +T  A
Sbjct: 428 LALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATA 462



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 128/238 (53%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ ++ AL      + A++        G+ PN +T++ ++  +C+     EA K ++ M 
Sbjct: 236 YSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMC 295

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            NG  PNV T++  ++ LCK+GR  EA ++ D M + G KP+I TY+ LL G    G + 
Sbjct: 296 SNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALV 355

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           E + +   +    ++PD Y +  ++    K G+ +EAM + ++  ++G+ PN VT++TL 
Sbjct: 356 EMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLI 415

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           NGYCK       + L + M      P+ I+Y+ +L GL + G+   A   + ++++ G
Sbjct: 416 NGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSG 473



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 145/276 (52%), Gaps = 2/276 (0%)

Query: 67  KERIDIFDSIKKDGTNW--SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           +E +++   +  DG     +V  ++ ++  L+   + + A   + E     + PN   +S
Sbjct: 178 QEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYS 237

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            +I   C      +A +V D M  NG  PN  T+T LV+  C SG+L EA++ L++M   
Sbjct: 238 SIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSN 297

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G +PN+ TY+  +  LC  GR  EA ++  ++   GLKPD+ TY++++ G+   G   E 
Sbjct: 298 GVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEM 357

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L +  ++  + P+   FNTL     K+G   + + +   M+++   P+ ++YSTL+NG
Sbjct: 358 HGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLING 417

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
             K  ++  A+++F+EMV  G   +    N +L+GL
Sbjct: 418 YCKITRMENALALFQEMVSNGVSPNFITYNIMLQGL 453



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 35/229 (15%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + +++ D + K+G   +   +  L+       +   A+KF  +  S G+ PN  
Sbjct: 245 KGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVV 304

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTT------------------------ 157
           T+S  +   C      EARK+ D M   G  P++TT                        
Sbjct: 305 TYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLM 364

Query: 158 -----------FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
                      F  L+ +  K G++ EA+ V  +M + G KPN  TY+ L+ G C + R+
Sbjct: 365 VQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRM 424

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           E A  +   + ++G+ P+  TY  ++ G  + GR+  A E   + I+ G
Sbjct: 425 ENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSG 473



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 1/175 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +    F+D + K     E   IFDS+ K G    ++ ++ LL    +          
Sbjct: 301 PNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGL 360

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F       + P+ + F+ +I     +    EA  V   M   G  PN  T++ L+N  CK
Sbjct: 361 FDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCK 420

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
             R++ AL +  +M   G  PN  TYN +L+GL   GR   A E  + +   G K
Sbjct: 421 ITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSGKK 475



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 49/104 (47%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           FN L+ A     + + A+  FS+    GL PN  T+S +I  YC       A  +   M 
Sbjct: 376 FNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMV 435

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            NG  PN  T+ I++  L ++GR   A E   Q+ + G K  I+
Sbjct: 436 SNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSGKKDLIE 479


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 196/438 (44%), Gaps = 67/438 (15%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS--EASSY-GLA-PNSWTFSIMI 127
           + + ++++G    +  FN  + AL    +   A + FS  E   Y GL  PNS T+++M+
Sbjct: 239 MVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298

Query: 128 RCYCN---------------KND--------------------FFEARKVIDCMFDNGYH 152
           + +C                +ND                    F EA  V+  M D G  
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIG 358

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P++ ++ IL++ LCK G L +A  ++  M R G  P+  TY CLL G C VG+V+ A  +
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           L  +  +   P+ YT   ++    K+GR +EA ELL +  E+G   + VT N + +G C 
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478

Query: 273 EGTPMKGVGLLKLMK-----------------------KRNCLPDKISYSTLLNGLLKWG 309
            G   K + ++K M+                       + NCLPD I+YSTLLNGL K G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           +   A ++F EM+    + D    N  +   C     ++  +  A++V + M KK     
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC-----KQGKISSAFRVLKDMEKKGCHKS 593

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY  +I  LG   +  E    +    E G  P   T+N  IQ LC   K++ A  LL 
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLD 653

Query: 430 LMYEHAKIPSRTSYDMLI 447
            M +    P+  S+  LI
Sbjct: 654 EMMQKNIAPNVFSFKYLI 671



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 178/394 (45%), Gaps = 50/394 (12%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           SV  +N LL + +     E     + +    G+AP ++TF+++IR  C+ +    AR++ 
Sbjct: 111 SVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELF 170

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M + G  PN  TF ILV   CK+G   + LE+L+ M   G  PN   YN ++   C  
Sbjct: 171 DEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCRE 230

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE-------AIERGV 256
           GR +++ +M+  ++ +GL PD+ T+ + +   CK G+  +A  + ++        + R  
Sbjct: 231 GRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR-- 288

Query: 257 TPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVS 316
            PN +T+N +  G+CK G       L + +++ + L    SY+  L GL++ GK   A +
Sbjct: 289 -PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347

Query: 317 IFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIV 376
           + K+M   G        N L+ GLC     +  +L DA  +   M +     D  TYG +
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLC-----KLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402

Query: 377 IRTLGKGKKTDEAL-------------------IHLHHAIEMGHIPR------------- 404
           +       K D A                    I LH   +MG I               
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462

Query: 405 ---TITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
              T+T N ++  LCG G++DKA+ ++  M  H 
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 109/460 (23%), Positives = 201/460 (43%), Gaps = 57/460 (12%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           ++FD + + G   +   F  L+         +  ++  +   S+G+ PN   ++ ++  +
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM---GRIGC- 186
           C +    ++ K+++ M + G  P++ TF   +++LCK G++ +A  +   M     +G  
Sbjct: 228 CREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287

Query: 187 KPNIQTYNCLLKGLCYVGRVE-----------------------------------EAYE 211
           +PN  TYN +LKG C VG +E                                   EA  
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347

Query: 212 MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYC 271
           +L  + + G+ P +Y+Y  +MDG CK+G  ++A  ++      GV P+ VT+  L +GYC
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407

Query: 272 KEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDER 331
             G       LL+ M + NCLP+  + + LL+ L K G+I  A  + ++M   G+ +D  
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467

Query: 332 MMNSLLRGLCMKSWEEKDL----------------LEDAY--QVFEKMTKKVSVTDPGTY 373
             N ++ GLC     +K +                L ++Y   V + + +   + D  TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
             ++  L K  +  EA       +     P ++ +N  I   C +GKI  A  +L  M +
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
                S  +Y+ LI  L    + ++   L     ++G+ P
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISP 627



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 160/325 (49%), Gaps = 9/325 (2%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P+V  + +L+ S  K  R++    +   M   G  P   T+N L++ LC    V+ A E+
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +   G KP+ +T+  ++ G+CK G +++ +ELLN     GV PN V +NT+ + +C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
           EG       +++ M++   +PD +++++ ++ L K GK+  A  IF +M     E+DE +
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM-----ELDEYL 284

Query: 333 M----NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                NS+   L +K + +  LLEDA  +FE + +   +    +Y I ++ L +  K  E
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           A   L    + G  P   ++N ++  LC  G +  A  ++ LM  +   P   +Y  L+ 
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLH 404

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
               + K   A +L    ++   +P
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLP 429



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 130/285 (45%), Gaps = 6/285 (2%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           P+  T+S ++   C    F EA+ +   M      P+   + I ++  CK G++  A  V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581

Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
           L  M + GC  +++TYN L+ GL    ++ E + ++  +K  G+ P++ TY   +   C+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641

Query: 238 VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
             +  +A  LL+E +++ + PNV +F  L   +CK         + +      C   +  
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGL 700

Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
           YS + N LL  G++  A  + + ++  GFE+   +   L+  LC     +KD LE A  +
Sbjct: 701 YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLC-----KKDELEVASGI 755

Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
             KM  +    DP     VI  LGK     EA       +EM  +
Sbjct: 756 LHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASV 800



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 2/244 (0%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFND 90
           FA A    AE +  K  P S+    F+    K   +     +   ++K G + S+  +N 
Sbjct: 540 FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           L++ L + N+         E    G++PN  T++  I+  C      +A  ++D M    
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PNV +F  L+ + CK      A EV +    I C      Y+ +   L   G++ +A 
Sbjct: 660 IAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKAT 718

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E+L  V + G +   + Y  +++  CK      A  +L++ I+RG   +      + +G 
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778

Query: 271 CKEG 274
            K G
Sbjct: 779 GKMG 782


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 188/412 (45%), Gaps = 5/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K    K   D+ D ++  G    V  +N L+  L   N          +     +APN +
Sbjct: 22  KKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEF 81

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I     +     A +V + M      PN  T+ IL++  C  G  ++AL +LD M
Sbjct: 82  TYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVM 141

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P+   Y  LL GL  + + + A  ++  ++  G+      YTA++DG CK G  
Sbjct: 142 EAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLL 201

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +E+++LL+   + G +P+++TF+ L NG+CK G       ++  M K    P+ + Y+TL
Sbjct: 202 DESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATL 261

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +    K G I  A   +  M R G +VD  + N L+  LC         + +A      M
Sbjct: 262 IYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLC-----RAGRVAEAEDFMRHM 316

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
           +      +  T+  +I   G      +A       I++GH P   T+ ++++ LC  G +
Sbjct: 317 STIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNL 376

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +A  LL+ ++          Y+ ++++  +  K  DA AL+G  ++  V+P
Sbjct: 377 REAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLP 428



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 185/431 (42%), Gaps = 34/431 (7%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E + + D + KDG +  +  F+ L+       + + A +   +    GLAPN  
Sbjct: 197 KHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYV 256

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I   C K D  EA +    M   G+  +     +L++SLC++GR+ EA + +  M
Sbjct: 257 IYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHM 316

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             I   PN  T++C++ G   +G   +A+ M   +   G  P  +TY +++ G CK G  
Sbjct: 317 STIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNL 376

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            EA +LL +        +   +NT+ +  CK G     V L   M + N LPD  +Y+ +
Sbjct: 377 REAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAII 436

Query: 302 LNGLLKWGKIRPAVSIF-KEMVRFGFEVDERMMNSLLRGL-------------------- 340
           L GL + GK+ PA+  F K + R     ++ M  SL  GL                    
Sbjct: 437 LAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKG 496

Query: 341 ----------CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
                      +  +     +E   ++F KM          TY I++    K K   +  
Sbjct: 497 INPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCS 556

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT-- 448
              +    MG  P  +T +++I  LC  G +D    +L  M     +  + + +MLIT  
Sbjct: 557 KFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNS 616

Query: 449 -KLDQLEKSYD 458
            + D++ K++D
Sbjct: 617 CETDKMGKAFD 627



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 150/300 (50%), Gaps = 12/300 (4%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M  +GY P + T+  ++N  CK GR K A +++D+M   G + ++ TYN L+  LC   R
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
             + Y +L  ++   + P+ +TY  +++G  K  +   A  + NE +   ++PN VT+N 
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           L +G+C  G   + + LL +M+ +   PD+++Y  LL+GL K  K   A S+ + +   G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
             V  R   +++ GLC     +  LL+++ Q+ + M K  +  D  T+ ++I    K  K
Sbjct: 181 MVVGYRAYTAMIDGLC-----KHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGK 235

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
              A   +    + G  P  + +  +I   C +G I +A       + +    +RT +D+
Sbjct: 236 IKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEA-------FRNYATMTRTGHDV 288



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 183/423 (43%), Gaps = 6/423 (1%)

Query: 52  LQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA 111
           + A    +  K   + E    + ++ + G +      N L+ +L        A  F    
Sbjct: 257 IYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHM 316

Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
           S+  LAPNS TF  +I  Y    D  +A  + D M   G+ P+  T+  L+  LCK G L
Sbjct: 317 STIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNL 376

Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
           +EA ++L ++  I    +   YN +L   C  G++ +A  +   +    + PD +TY  +
Sbjct: 377 REAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAII 436

Query: 232 MDGFCKVGRSNEAMELLNEAIERG-VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           + G  + G+   A+    +A+ RG ++PN V + +LF+G  K G       + + M+ + 
Sbjct: 437 LAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKG 496

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
             PD I+ + +L+G  + GK+     +F +M            N LL G   K    KDL
Sbjct: 497 INPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKK----KDL 552

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           L+   + +  MT+     D  T   +I  L K    D     L   I    +   +T N 
Sbjct: 553 LK-CSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNM 611

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           +I   C   K+ KA  LL +      IP   +Y+ + T L++     ++  L    L++G
Sbjct: 612 LITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERG 671

Query: 471 VIP 473
           + P
Sbjct: 672 ITP 674



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 158/369 (42%), Gaps = 9/369 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L   L  + +   A   + E    G+ P++   + ++  Y       +  K+   M 
Sbjct: 469 YTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQ 528

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
                P++ T+ IL++   K   L +  +  + M R+G  P+  T + ++ GLC  G ++
Sbjct: 529 SGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLD 588

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
             ++ML  +  +    D  T   ++   C+  +  +A +LLN     G+ P+V T+N +F
Sbjct: 589 VGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIF 648

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
            G  +     +   LL  M +R   P    Y +L+NG+ + G I+ A  +  EM   G  
Sbjct: 649 TGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVS 708

Query: 328 VDERMMNSLLRGL--CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
             +   ++++RGL  C K       +E+A  V + M +K  +    T+  ++  L K  K
Sbjct: 709 SWDVAESAMVRGLAQCGK-------VEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAK 761

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
             EAL         G     + +N +I  LC +G    A  L   M E    P+ T+Y  
Sbjct: 762 LSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCT 821

Query: 446 LITKLDQLE 454
           LI  +   E
Sbjct: 822 LIDAISTNE 830



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 160/361 (44%), Gaps = 42/361 (11%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I++ ++  G N      N +L     + + E   K F +  S  L P+  T++I++  Y 
Sbjct: 488 IYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYS 547

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVL------------- 178
            K D  +  K  + M   G  P+  T   ++  LCKSG L    ++L             
Sbjct: 548 KKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQL 607

Query: 179 ------------DQMGR----------IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
                       D+MG+          +G  P++ TYN +  GL     + E++ +L ++
Sbjct: 608 TLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDM 667

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
              G+ P    Y ++++G C++G    A  L +E    GV+   V  + +  G  + G  
Sbjct: 668 LERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKV 727

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            + + +L  M ++  +P   +++TL++ L K  K+  A+ +  +M  +G ++D    N L
Sbjct: 728 EEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVL 787

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG--KGKKTDEALIHLH 394
           + GLC     + D L  A+ ++E+M ++    +  TY  +I  +   +G+  +  L++L 
Sbjct: 788 ISGLC----ADGDALA-AFNLYEEMKERGLWPNTTTYCTLIDAISTNEGEVEERLLVYLE 842

Query: 395 H 395
            
Sbjct: 843 Q 843



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/423 (21%), Positives = 175/423 (41%), Gaps = 43/423 (10%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +N +L       +   AV  F E   + + P+S T++I++     K     A    +   
Sbjct: 398 YNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKAL 457

Query: 148 DNG-YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
             G   PN   +T L + L K G+   A  + ++M   G  P+    N +L G   +G++
Sbjct: 458 ARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKM 517

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           E+  ++ + +++  L P + TY  ++ G+ K     +  +  N     G++P+ +T +++
Sbjct: 518 EKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSI 577

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCL---------------------------------- 292
             G CK G    G  +LK M   + L                                  
Sbjct: 578 ILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGI 637

Query: 293 -PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            PD  +Y+ +  GL +   +R +  +  +M+  G         SL+ G+C         +
Sbjct: 638 IPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMC-----RMGDI 692

Query: 352 EDAYQVFEKMTK-KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           + A+++ ++M    VS  D     +V R L +  K +EA++ L   ++   IP   TF  
Sbjct: 693 QGAFRLKDEMEAIGVSSWDVAESAMV-RGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTT 751

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           ++  LC + K+ +AL L   M  +       +Y++LI+ L     +  A  LY    ++G
Sbjct: 752 LMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERG 811

Query: 471 VIP 473
           + P
Sbjct: 812 LWP 814


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 156/303 (51%), Gaps = 5/303 (1%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
           F+ E    G   + + F+I++  +C + D   A+ V + +   G  P+V +F  L+N   
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYI 171

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           + G L E   +   M   G +P++ TY+ L+ GLC   ++++A E+   + + GL P+  
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 231

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+T ++DG CK GR + AME+  + + + ++P+++T+NTL  G CK+G   +   L+  M
Sbjct: 232 TFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 291

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
             +   PDKI+Y+TL++G  K G +  A    K M++    +D+    +L+ GLC    +
Sbjct: 292 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLC----Q 347

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
           E   L DA +V  +M       D GTY ++I    K          L      GH+P  +
Sbjct: 348 EGRYL-DAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 406

Query: 407 TFN 409
           T+N
Sbjct: 407 TYN 409



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 139/268 (51%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F++I K G   SV  FN L+   + L + +   +  S   + G+ P+ +T+S++I   C
Sbjct: 147 VFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLC 206

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            ++   +A ++ D M D G  PN  TFT L++  CKSGR+  A+E+  QM      P++ 
Sbjct: 207 KESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLI 266

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ GLC  G +++A++++  +   GLKPD  TYT ++DG CK G    A E     
Sbjct: 267 TYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRM 326

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           I+  +  + V +  L +G C+EG  +    +L+ M      PD  +Y+ ++N   K G +
Sbjct: 327 IQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDV 386

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRG 339
                + KEM R G        N L+ G
Sbjct: 387 WTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 144/283 (50%), Gaps = 2/283 (0%)

Query: 73  FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
           ++ I + G   S+  FN L+       +   A   F+  + +GL P+  +F+ ++  Y  
Sbjct: 113 YEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIR 172

Query: 133 KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQT 192
             D  E  ++   M  +G  P+V T+++L+N LCK  ++ +A E+ D+M   G  PN  T
Sbjct: 173 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 232

Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAI 252
           +  L+ G C  GRV+ A E+   + +  L PD+ TY  ++ G CK G   +A +L++E  
Sbjct: 233 FTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 292

Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
            +G+ P+ +T+ TL +G CKEG         K M + N   D ++Y+ L++GL + G+  
Sbjct: 293 MKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYL 352

Query: 313 PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS--WEEKDLLED 353
            A  + +EM+  G + D      ++   C K   W    LL++
Sbjct: 353 DAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKE 395



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 5/289 (1%)

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G   ++  +N L+   C  G +  A  +   +   GL+P V ++  +M+G+ ++G  +E 
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 179

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
             L +     GV P+V T++ L NG CKE        L   M  +  +P+ ++++TL++G
Sbjct: 180 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 239

Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
             K G++  A+ I+K+M+      D    N+L+ GLC     +K  L+ A+ + ++M+ K
Sbjct: 240 HCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLC-----KKGDLKQAHDLIDEMSMK 294

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY  +I    K    + A  H    I+       + +  +I  LC EG+   A
Sbjct: 295 GLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDA 354

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +L  M      P   +Y M+I +  +    +    L     + G +P
Sbjct: 355 EKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 403



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 117/294 (39%), Gaps = 40/294 (13%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           ++  F+ L+ +  +SG L++A+E               T   +L+ +  +   +  +   
Sbjct: 54  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFY 113

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +   G    +Y +  +M  FCK G    A  + N   + G+ P+VV+FNTL NGY + 
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 173

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +G  L   M      PD  +YS L+NGL K  K                       
Sbjct: 174 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK----------------------- 210

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
                            ++DA ++F++M  K  V +  T+  +I    K  + D A+   
Sbjct: 211 -----------------MDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIY 253

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              +     P  IT+N +I  LC +G + +A  L+  M      P + +Y  LI
Sbjct: 254 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 307


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 173/359 (48%), Gaps = 21/359 (5%)

Query: 86  SDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDC 145
           S ++ ++  L   ++ E A   F E    G+ P+ +T++I+I  +C      +ARK  D 
Sbjct: 461 STYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDE 520

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M   G  PNV T+T L+++  K+ ++  A E+ + M   GCKPN+ TY  L+ G C  G+
Sbjct: 521 MLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQ 580

Query: 206 VEEAYEMLMNVK----------------NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           +E+A ++   ++                N+   P+V TY A++DG CK  R  EA ELL+
Sbjct: 581 IEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLD 640

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
             +  G  PN + ++ + +G+CK G       +   M +R   P+  +YS+ ++ L K  
Sbjct: 641 TMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDN 700

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
           ++   + +  +M+      +  +   ++ GLC     +    ++AY++  KM +K    +
Sbjct: 701 RLDLVLKVLSKMLENSCTPNVVIYTEMVDGLC-----KIGKTDEAYKLMLKMEEKGCNPN 755

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             TY  +I   GK  K ++ L         G  P  IT+  +I   C  G +D+A  LL
Sbjct: 756 VVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLL 814



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 210/466 (45%), Gaps = 62/466 (13%)

Query: 63  ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           AS +++   +F+ +K++G   SV  +  L+ +       + A K+F E    G  PN  T
Sbjct: 473 ASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVT 532

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM- 181
           ++ +I  Y        A ++ + M   G  PNV T+T L++  CK+G++++A ++  +M 
Sbjct: 533 YTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMR 592

Query: 182 GRI--------------GCK-PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           G I               C+ PN+ TY  L+ GLC   RV+EA+E+L  +   G +P+  
Sbjct: 593 GDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQI 652

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERG------------------------------- 255
            Y AV+DGFCK+G+  +A E+  +  ERG                               
Sbjct: 653 VYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKM 712

Query: 256 ----VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
                TPNVV +  + +G CK G   +   L+  M+++ C P+ ++Y+ +++G  K GKI
Sbjct: 713 LENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKI 772

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
              + +F++M   G   +      L+   C        LL++AY++ ++M +        
Sbjct: 773 EQCLELFRDMCSKGCAPNFITYRVLINHCC-----SNGLLDEAYKLLDEMKQTYWPKHIL 827

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           ++  +I    +   T   L  L    E   +P    +  +I      G+++ AL LL  +
Sbjct: 828 SHRKIIEGFSQEFITSIGL--LDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEI 885

Query: 432 Y---EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
                HA + ++  Y  LI  L    K   A  LY + + + V+P+
Sbjct: 886 SSSPSHA-VSNKYLYASLIENLSHASKVDKALELYASMISKNVVPE 930



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 118/513 (23%), Positives = 203/513 (39%), Gaps = 88/513 (17%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++   R V  + +AS  +E +DI   ++      +V  +  LL   +   +     + 
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRI 336

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS--- 164
            S   + G  PN   F+ +I  YC   D+  A K+   M   G  P    + I + S   
Sbjct: 337 LSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCS 396

Query: 165 --------------------------------------LCKSGRLKEALEVLDQMGRIGC 186
                                                 LC +G+  +A +++ +M   G 
Sbjct: 397 NEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGF 456

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P+  TY+ ++  LC   +VE+A+ +   +K +G+ P VYTYT ++D FCK G   +A +
Sbjct: 457 VPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARK 516

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
             +E + +G TPNVVT+  L + Y K         L ++M    C P+ ++Y+ L++G  
Sbjct: 517 WFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHC 576

Query: 307 KWGKIRPAVSIFKEM-------------------------VRFGFEVD-----------E 330
           K G+I  A  I+  M                         + +G  VD            
Sbjct: 577 KAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAH 636

Query: 331 RMMNSLLRGLCMKSWEEKDL----------LEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
            +++++L   C  +    D           L+DA +VF KM+++    +  TY   I  L
Sbjct: 637 ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            K  + D  L  L   +E    P  + +  ++  LC  GK D+A  L+  M E    P+ 
Sbjct: 697 FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +Y  +I    +  K      L+     +G  P
Sbjct: 757 VTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAP 789



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 183/400 (45%), Gaps = 24/400 (6%)

Query: 88  FNDLLMALVMLNEQ--ETAVKFFSEAS---SYGLAPNSWTFSI-MIRCYCNKNDFFEARK 141
            ND L+  VM N +  E  VKFF  A     Y   P  +   + ++ C  N +D    + 
Sbjct: 104 LNDSLVVEVMNNVKNPELCVKFFLWAGRQIGYSHTPQVFDKLLDLLGCNVNADDRVPLKF 163

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           +++ + D+ +         LV   C++G    ALE L ++   G KP+  TYN L++   
Sbjct: 164 LME-IKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFL 222

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
              +++ AY +   + +     D YT +      CK G+  EA +L++EA      P+ V
Sbjct: 223 RADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA--EDFVPDTV 280

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            +N + +G C+     + + +L  M+  +C+P+ ++Y  LL+G L+ G++     I   M
Sbjct: 281 FYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMM 340

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVIRT 379
           +  G   +  + NSL+   C    + +D    AY++F+KM K      PG   Y I I +
Sbjct: 341 ITEGCYPNREIFNSLIHAYC----KSRD-YSYAYKLFKKMIK--CGCQPGYLVYNIFIGS 393

Query: 380 LGKGKKTDEALI------HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYE 433
           +   ++   + I           +++G +   +  +N  + LCG GK D+A  ++  M  
Sbjct: 394 VCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMG 453

Query: 434 HAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
              +P  ++Y  +I  L    K   A +L+    + G++P
Sbjct: 454 KGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVP 493



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 159/377 (42%), Gaps = 15/377 (3%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A++       +G  P+  T++ +I+ +   +    A  V   M    +  +  T +    
Sbjct: 195 ALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAY 254

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           SLCK G+ +EA +++D+       P+   YN ++ GLC     EEA ++L  +++    P
Sbjct: 255 SLCKGGKCREAFDLIDEAEDF--VPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIP 312

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           +V TY  ++ G  + G+      +L+  I  G  PN   FN+L + YCK         L 
Sbjct: 313 NVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLF 372

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI-------FKEMVRFGFEVDERMMNSL 336
           K M K  C P  + Y+  +  +    + +P+  I       + EM+  G  +++  +++ 
Sbjct: 373 KKMIKCGCQPGYLVYNIFIGSVCS-NEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNF 431

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
            R LC          + A+++  +M  K  V D  TY  VI  L    K ++A       
Sbjct: 432 ARCLCGAG-----KFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEM 486

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
              G +P   T+  +I + C  G I +A      M      P+  +Y  LI    + ++ 
Sbjct: 487 KRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQM 546

Query: 457 YDACALYGAALKQGVIP 473
             A  L+   L +G  P
Sbjct: 547 PVADELFEMMLLEGCKP 563



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 170/400 (42%), Gaps = 23/400 (5%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           +K  G   S + +N L+   +  ++ +TA     E  SY    + +T S      C    
Sbjct: 202 LKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGK 261

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
             EA  +ID   D  + P+   +  +V+ LC++   +EA+++L +M    C PN+ TY  
Sbjct: 262 CREAFDLIDEAED--FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRI 319

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           LL G    G++     +L  +  +G  P+   + +++  +CK    + A +L  + I+ G
Sbjct: 320 LLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCG 379

Query: 256 VTPNVVTFNTLFNGYCK-EGTPMKGVGLLKLMKKR-------NCLPDKISYSTLLNGLLK 307
             P  + +N      C  E  P   +  L L++K          + +K++ S     L  
Sbjct: 380 CQPGYLVYNIFIGSVCSNEEQPSSDI--LDLVEKAYSEMLDLGVVLNKVNVSNFARCLCG 437

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
            GK   A  I  EM+  GF  D+   + ++  LC  S  EK     A+ +FE+M +   V
Sbjct: 438 AGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEK-----AFSLFEEMKRNGIV 492

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
               TY I+I +  K     +A       +  G  P  +T+  +I A     ++  A  L
Sbjct: 493 PSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADEL 552

Query: 428 LFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYG 464
             +M      P+  +Y  LI    K  Q+EK   AC +Y 
Sbjct: 553 FEMMLLEGCKPNVVTYTALIDGHCKAGQIEK---ACQIYA 589



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/261 (18%), Positives = 104/261 (39%), Gaps = 36/261 (13%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           +P       F+D + K + L   + +   + ++    +V  + +++  L  + + + A K
Sbjct: 683 SPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYK 742

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
              +    G  PN  T++ MI  +       +  ++   M   G  PN  T+ +L+N  C
Sbjct: 743 LMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCC 802

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC------------------------- 201
            +G L EA ++LD+M +     +I ++  +++G                           
Sbjct: 803 SNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLY 862

Query: 202 ------YV--GRVEEAYEMLMNVKNDGLKP--DVYTYTAVMDGFCKVGRSNEAMELLNEA 251
                 Y+  GR+E A ++L  + +       + Y Y ++++      + ++A+EL    
Sbjct: 863 RILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASM 922

Query: 252 IERGVTPNVVTFNTLFNGYCK 272
           I + V P +     L  G  K
Sbjct: 923 ISKNVVPELSILVHLIKGLIK 943


>gi|449435418|ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
 gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 199/457 (43%), Gaps = 35/457 (7%)

Query: 52  LQAQRFVDR------IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAV 105
           L A R V R      +K   + E I IFD + +     +  D+N  +  L+  +  + A 
Sbjct: 5   LGANRLVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAE 64

Query: 106 KFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSL 165
            ++S     G +   +T+S  I   C   +F    ++++ M   GY P++  F I +N L
Sbjct: 65  SYYSRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLL 124

Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
            +   L+ AL+  D+M   G +P++ TY  ++  LC   + ++A E    + N GL PD+
Sbjct: 125 FRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDM 184

Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
              TA++ G C  G+ + A EL    ++  +  N + FN+L +G+CK G   K + +   
Sbjct: 185 KACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSF 244

Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC---- 341
           M K  C PD I+Y+ LLN       +  A    K+M R G E D    N LL+GLC    
Sbjct: 245 MSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANR 304

Query: 342 -------MKSWEEKDLLE------------------DAYQVFEKMTKKVSVTDPGTYGIV 376
                  M +  EK L +                   AY++FE+M +K    D GT+  +
Sbjct: 305 LDKAYKLMNTMWEKGLCDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATL 364

Query: 377 IRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAK 436
           I+          A   L    +   IP  I +  V+   C   KI+ A  +   M E   
Sbjct: 365 IKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGI 424

Query: 437 IPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            P   SY+ LI  L +  K  +A  LY     +G  P
Sbjct: 425 SPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYP 461



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A K   +    G+ P+ ++++ +++  C  N   +A K+++ M++ G    V+ +  +
Sbjct: 271 ELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLCDTVS-YNTV 329

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           + +LCKS   ++A  + ++MG+    P++ T+  L+K     G    A  +L  +    L
Sbjct: 330 IGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVL 389

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            PD+  YT V+D FCK  +   A  +  + IE G++P+VV++N L NG CK     + + 
Sbjct: 390 IPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAML 449

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           L + M+ R C PD++++  ++ GLL+  ++  A  ++ +M+  G+ +D+ +  +L++ +
Sbjct: 450 LYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLIKAI 508



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 163/402 (40%), Gaps = 109/402 (27%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + + +K+ G    +  FN  L  L   N  E A+KFF E  + G  P+  T++I++   C
Sbjct: 101 LLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLC 160

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILV----------------------------- 162
               + +A +   CM + G  P++   T LV                             
Sbjct: 161 KAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNL 220

Query: 163 --NSL----CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
             NSL    CKSGR+ +AL +   M + GC+P++ TYN LL   C    +E A + +  +
Sbjct: 221 IFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKM 280

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG--------------------- 255
           +  G++PDVY+Y  ++ G CK  R ++A +L+N   E+G                     
Sbjct: 281 ERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLCDTVSYNTVIGALCKSFATR 340

Query: 256 -------------VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI------ 296
                        V P+V TF TL   +  EG+P    GLL+ M +   +PD I      
Sbjct: 341 KAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVV 400

Query: 297 -----------------------------SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
                                        SY+ L+NGL K  K+  A+ +++EM   G  
Sbjct: 401 DYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCY 460

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
            DE     ++ GL       K  L  A QV+++M +K    D
Sbjct: 461 PDEVTFKLIIGGLL-----RKKELSLACQVWDQMMEKGYTLD 497



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 5/183 (2%)

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
           +++ +   +   +K G I  A+ IF EM +    V  R  N  +  L  +S    DL E 
Sbjct: 8   NRLVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRS--RFDLAES 65

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
            Y    +M  +     P TY   I  L + K        L    ++G++P    FN  + 
Sbjct: 66  YYS---RMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLN 122

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            L  E  ++ AL     M    + P   +Y +++ +L + ++   A   +   + +G+ P
Sbjct: 123 LLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSP 182

Query: 474 QRK 476
             K
Sbjct: 183 DMK 185


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 182/377 (48%), Gaps = 12/377 (3%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           ++ L+  L      + AV    E    G  PN   F+++I   C K D   A K++D MF
Sbjct: 38  YSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMF 97

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
             G  PN  T+  LV+ LC  G+L +A+ +L++M    C PN  T+  L+ G    GR  
Sbjct: 98  LKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRAL 157

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           +   +L++++  G + + ++Y++++ G  K G+    M+L  E +E+G  PN + ++ L 
Sbjct: 158 DGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALI 217

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G C+EG P +    L  MK +   P+  +YS+L+ G  + G I  A+ ++KEM      
Sbjct: 218 DGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCN 277

Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
             E   + L+ GLC     +   L++A  V+++M  +    D   Y  +I      +  +
Sbjct: 278 HHEVCYSILINGLC-----KNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVE 332

Query: 388 EALIHLHHAIEMGHIPR----TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
           + +   +    + H P+     +T+N ++ A C +  + +A+ +L  M +    P   + 
Sbjct: 333 QGMKLFNQM--LCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITC 390

Query: 444 DMLITKL-DQLEKSYDA 459
           D+ +  L D ++   D 
Sbjct: 391 DIFLKTLRDNMDPPQDG 407



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 184/385 (47%), Gaps = 7/385 (1%)

Query: 91  LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
           +++AL  +   + AV+ F   S      + +T+S ++   CN+    EA  ++D M   G
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PN   F +L+++LCK G L  A +++D M   GC PN  TYN L+ GLC  G++++A 
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +L  +  +   P+  T+  ++DGF K GR+ + + +L    E+G   N  ++++L +G 
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
            KEG    G+ L K M ++ C P+ I YS L++GL + GK   A     EM   G   + 
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 245

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
              +SL+ G     + E   +  A  V+++MT          Y I+I  L K  K  EAL
Sbjct: 246 FTYSSLMWG-----YFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEAL 300

Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH-AKI-PSRTSYDMLIT 448
           I     +  G     + ++++I   C    +++ + L   M  H  K+ P   +Y++L+ 
Sbjct: 301 IVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLN 360

Query: 449 KLDQLEKSYDACALYGAALKQGVIP 473
                     A  +    L QG  P
Sbjct: 361 AFCTKNSVSRAIDILNTMLDQGCDP 385



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 127/260 (48%), Gaps = 3/260 (1%)

Query: 49  PRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P  +     VD  +K     + + +  S+++ G   +   ++ L+  L    + E  ++ 
Sbjct: 138 PNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQL 197

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           + E    G  PN+  +S +I   C +    EA++ +  M + G+ PN  T++ L+    +
Sbjct: 198 WKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFE 257

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
           +G + +A+ V  +M    C  +   Y+ L+ GLC  G+++EA  +   + + G+K DV  
Sbjct: 258 AGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVA 317

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
           Y++++ GFC      + M+L N+ +     + P+VVT+N L N +C + +  + + +L  
Sbjct: 318 YSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNT 377

Query: 286 MKKRNCLPDKISYSTLLNGL 305
           M  + C PD I+    L  L
Sbjct: 378 MLDQGCDPDFITCDIFLKTL 397


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 193/411 (46%), Gaps = 17/411 (4%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L E I IF+ +K    +  V  +N L+           A +F  E  + GL PN  
Sbjct: 103 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 162

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S  I  +C +    EA K    M      PN  T+T L+++ CK+G L EAL++++++
Sbjct: 163 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 222

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            + G K N+ TY  LL GLC  GR++EA E+   + N G+ P+  TYTA++ GF K    
Sbjct: 223 LQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEM 282

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A ++L E  E+ + P+++ + T+  G C E    +   L+  +K+     + + Y+TL
Sbjct: 283 EYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTL 342

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++   K G+   A+++ +EM+             L+ GLC     + +  E A ++F++M
Sbjct: 343 MDAYFKSGQATEALTLLEEML------------DLVDGLC-----KNNCFEVAKKLFDEM 385

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
             K  + D   Y  +I    K     EAL      IE+G       +  +I  L   G++
Sbjct: 386 LDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQV 445

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
            KA  LL  M     +P    Y  LI K   L K  +A  L     K+G+I
Sbjct: 446 QKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 496



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 175/340 (51%), Gaps = 5/340 (1%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N LL  L  +   + + KFF +  + G+  + +T++IMI   C + D   AR +   M +
Sbjct: 25  NALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKE 84

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G+ P++ T+  L++   K G L E + + +QM    C P++ TYN L+   C   R+ +
Sbjct: 85  AGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPK 144

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A+E L  +K +GLKP+V TY+  +D FCK G   EA++   +     +TPN  T+ +L +
Sbjct: 145 AFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLID 204

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
             CK G   + + L++ + +     + ++Y+ LL+GL + G+++ A  +F+ M+  G   
Sbjct: 205 ANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP 264

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
           ++    +L+ G  +K+ E    +E A  + ++M +K    D   YG ++  L    + +E
Sbjct: 265 NQETYTALVHGF-IKAKE----MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEE 319

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           A + +    E G     + +  ++ A    G+  +AL LL
Sbjct: 320 AKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLL 359


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 172/341 (50%), Gaps = 24/341 (7%)

Query: 146 MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
           M + G   NV TFT L+N LC+ GR+ +AL ++D+M   G +P+  TY  ++ G+C +G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
              A  ML  +    +K +V  Y+A++D  CK G   +A  +  E  E+G+ PNV+T+N 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
           + +GYC  G       LL+ M +RN  PD +++S L+N  +K GK+  A  +++EM+R  
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                   +S++ G C  S      LEDA  +F+ M  K    D  T   +I    + K+
Sbjct: 181 IFPTTITYSSMIDGFCKHSR-----LEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKR 235

Query: 386 TDEALIH--------------LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
               LIH                  I  G  P  +T N ++  LC  GK++KA L +F +
Sbjct: 236 ---HLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKA-LEMFKV 291

Query: 432 YEHAKIPSRTSY-DMLITKLDQLEKSYDACALYGAALKQGV 471
           ++ +K+   T+  +++I  + +  K  +A  L+ +    GV
Sbjct: 292 FQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGV 332



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 184/405 (45%), Gaps = 16/405 (3%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G   +V  F  L+  L        A+         G  P++ T+  ++   C   D   A
Sbjct: 5   GCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSA 64

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
             ++  M ++    NV  ++ +V+ LCK G   +A  +  +M   G  PN+ TYNC++ G
Sbjct: 65  LNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDG 124

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
            C  G+  +A ++L ++    + PDV T++A+++ F K G+ + A EL  E + R + P 
Sbjct: 125 YCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPT 184

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN-----------GLLKW 308
            +T++++ +G+CK         +  LM  + C PD I+ +TL++           G  + 
Sbjct: 185 TITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQV 244

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G +  A  +F+EM+  G   D    N+LL GLC     E   LE A ++F+   K     
Sbjct: 245 GNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLC-----ENGKLEKALEMFKVFQKSKMDL 299

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  T  I+I  + KG K DEA    +     G     +T+N +I     EG   +A  + 
Sbjct: 300 DTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIY 359

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             M     IPS  +Y+ ++    +  +  +A  +  + + +G  P
Sbjct: 360 LEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSP 404



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 181/381 (47%), Gaps = 16/381 (4%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A   F+E    G+ PN  T++ MI  YC+   + +A +++  M +    P+V TF+ L+N
Sbjct: 99  AQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALIN 158

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
           +  K G++  A E+  +M R    P   TY+ ++ G C   R+E+A  M   + + G  P
Sbjct: 159 AFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSP 218

Query: 224 DVYTYTAVMDG-----------FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
           D+ T   ++DG           FC+VG  N A +L  E I  GV+P++VT NTL  G C+
Sbjct: 219 DIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCE 278

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
            G   K + + K+ +K     D  + + ++NG+ K  K+  A  +F  +   G E D   
Sbjct: 279 NGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVT 338

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            N L+ G+ +K   E + L  A  ++ +M  K  +    TY  ++    K  + +EA   
Sbjct: 339 YNILI-GVFVK---EGNFLR-AEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQM 393

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
           +   +  G  P  +TF+ +I+  C  G++D  L L   M +   +    +Y+ LI    +
Sbjct: 394 VDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCK 453

Query: 453 LEKSYDACALYGAALKQGVIP 473
           +     A  ++   +  GV P
Sbjct: 454 VGDLNGAQDIFEEMVSSGVCP 474



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 167/355 (47%), Gaps = 16/355 (4%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  F+ L+ A V   +   A + + E     + P + T+S MI  +C  +   +A+ + D
Sbjct: 150 VVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFD 209

Query: 145 CMFDNGYHPNVTTFTILVNSLCKS-----------GRLKEALEVLDQMGRIGCKPNIQTY 193
            M   G  P++ T   L++  C++           G +  A ++  +M   G  P+I T 
Sbjct: 210 LMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTC 269

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           N LL GLC  G++E+A EM    +   +  D  T   +++G CK  + +EA +L N    
Sbjct: 270 NTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPV 329

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
            GV  +VVT+N L   + KEG  ++   +   M  +  +P  ++Y+++++G  K  ++  
Sbjct: 330 NGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEE 389

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A  +   MV  G   D    ++L++G C     +   ++D  ++F +M ++  V D  TY
Sbjct: 390 ARQMVDSMVSEGCSPDVVTFSTLIKGYC-----KAGRVDDGLELFSEMCQRGLVADTITY 444

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
             +I    K    + A       +  G  P TITF +++  LC + ++ K L +L
Sbjct: 445 NALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTML 499



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/436 (22%), Positives = 195/436 (44%), Gaps = 33/436 (7%)

Query: 50  RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
           R LQA   VDR+                ++G       +  ++  +  L +  +A+    
Sbjct: 25  RVLQALALVDRMV---------------EEGHQPDAVTYGTIVNGMCKLGDTVSALNMLR 69

Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
           +     +  N   +S ++   C   +  +A+ +   M + G  PNV T+  +++  C  G
Sbjct: 70  KMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYG 129

Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
           +  +A ++L  M      P++ T++ L+      G+V  A E+   +    + P   TY+
Sbjct: 130 KWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYS 189

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN-----------GYCKEGTPMK 278
           +++DGFCK  R  +A  + +  + +G +P+++T NTL +           G+C+ G    
Sbjct: 190 SMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNV 249

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              L + M      PD ++ +TLL GL + GK+  A+ +FK   +   ++D    N ++ 
Sbjct: 250 AQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIIN 309

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK-GKKTDEALIHLHHAI 397
           G+C     + + +++A+ +F  +      TD  TY I+I    K G       I+L    
Sbjct: 310 GMC-----KGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLC 364

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
           + G IP T+T+N+++   C + ++++A  ++  M      P   ++  LI    +  +  
Sbjct: 365 K-GIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVD 423

Query: 458 DACALYGAALKQGVIP 473
           D   L+    ++G++ 
Sbjct: 424 DGLELFSEMCQRGLVA 439



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 151/319 (47%), Gaps = 14/319 (4%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFN-----------DLLMALV 96
           P ++     +D   K S L++   +FD +   G +  +   N            L+    
Sbjct: 183 PTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFC 242

Query: 97  MLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
            +     A   F E  S G++P+  T + ++   C      +A ++      +    +  
Sbjct: 243 QVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTA 302

Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           T  I++N +CK  ++ EA ++ + +   G + ++ TYN L+      G    A ++ + +
Sbjct: 303 TCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEM 362

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
              G+ P   TY +++DGFCK  R  EA ++++  +  G +P+VVTF+TL  GYCK G  
Sbjct: 363 LCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRV 422

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
             G+ L   M +R  + D I+Y+ L++G  K G +  A  IF+EMV  G   D     S+
Sbjct: 423 DDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSM 482

Query: 337 LRGLCMKSWEEKDL--LED 353
           L GLC K+  +K L  LED
Sbjct: 483 LAGLCTKAELQKGLTMLED 501



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 131/251 (52%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           D+F  +  +G +  +   N LL  L    + E A++ F       +  ++ T +I+I   
Sbjct: 252 DLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGM 311

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C  N   EA  + + +  NG   +V T+ IL+    K G    A ++  +M   G  P+ 
Sbjct: 312 CKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPST 371

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN ++ G C   R+EEA +M+ ++ ++G  PDV T++ ++ G+CK GR ++ +EL +E
Sbjct: 372 VTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSE 431

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
             +RG+  + +T+N L +G+CK G       + + M      PD I++ ++L GL    +
Sbjct: 432 MCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAE 491

Query: 311 IRPAVSIFKEM 321
           ++  +++ +++
Sbjct: 492 LQKGLTMLEDL 502



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 119/223 (53%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L++ +++F   +K   +   +  N ++  +   N+ + A   F+     G+  +  T++I
Sbjct: 282 LEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNI 341

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +  + +F  A  +   M   G  P+  T+  +V+  CK  RL+EA +++D M   G
Sbjct: 342 LIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEG 401

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C P++ T++ L+KG C  GRV++  E+   +   GL  D  TY A++ GFCKVG  N A 
Sbjct: 402 CSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQ 461

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
           ++  E +  GV P+ +TF ++  G C +    KG+ +L+ ++K
Sbjct: 462 DIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 1/136 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P ++     VD   K + L+E   + DS+  +G +  V  F+ L+         +  ++ 
Sbjct: 369 PSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLEL 428

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           FSE    GL  ++ T++ +I  +C   D   A+ + + M  +G  P+  TF  ++  LC 
Sbjct: 429 FSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCT 488

Query: 168 SGRLKEALEVLDQMGR 183
              L++ L +L+ + +
Sbjct: 489 KAELQKGLTMLEDLQK 504


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 156/303 (51%), Gaps = 5/303 (1%)

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
           F+ E    G   + + F+I++  +C + D   A  V D +   G  P+V +F  L+N   
Sbjct: 127 FYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYI 186

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
           + G L E   +   M   G +P++ TY+ L+ GLC   ++++A E+   + + GL P+  
Sbjct: 187 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 246

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+T ++DG CK GR + AME+  + + + ++P+++T+NTL  G CK+G   +   L+  M
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 306

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           + +   PDKISY+TL++G  K G +  A    K M++    +D+    +L+ GLC    E
Sbjct: 307 RMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQ---E 363

Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
            + +  DA ++  +M       D GTY ++I    K          L      GH+P  +
Sbjct: 364 GRSI--DAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 421

Query: 407 TFN 409
           T+N
Sbjct: 422 TYN 424



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 143/278 (51%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++  + +FD+I K G   SV  FN L+   + L + +   +  S   + G+ P+ +
Sbjct: 152 KEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVY 211

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+S++I   C ++   +A ++ D M D G  PN  TFT L++  CK+GR+  A+EV  QM
Sbjct: 212 TYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQM 271

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
                 P++ TYN L+ GLC  G +++A +++  ++  GLKPD  +YT ++DG CK G  
Sbjct: 272 LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDL 331

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A E     I+  +  + V +  L +G C+EG  +    +L+ M      PD  +Y+ +
Sbjct: 332 ETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMI 391

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           +N   K G +     + KEM R G        N L+ G
Sbjct: 392 INEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 142/284 (50%), Gaps = 2/284 (0%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
            +  I + G   S+  FN L+       +   A+  F   + +GL P+  +F+ ++  Y 
Sbjct: 127 FYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYI 186

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              D  E  ++   M  +G  P+V T+++L+N LCK  ++ +A E+ D+M   G  PN  
Sbjct: 187 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 246

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           T+  L+ G C  GRV+ A E+   + +  L PD+ TY  ++ G CK G   +A +L++E 
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 306

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
             +G+ P+ +++ TL +G CKEG         K M + N   D ++Y+ L++GL + G+ 
Sbjct: 307 RMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 366

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS--WEEKDLLED 353
             A  + +EM+  G   D      ++   C K   W    LL++
Sbjct: 367 IDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKE 410



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 162/334 (48%), Gaps = 44/334 (13%)

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
           +++++C    GY  ++  F IL++  CK G ++ AL V D + + G +P++ ++N L+ G
Sbjct: 129 KEILEC----GYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNG 184

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
              +G ++E + +   +   G++PDVYTY+ +++G CK  + ++A EL +E +++G+ PN
Sbjct: 185 YIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPN 244

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
            VTF TL +G+CK G     + + K M  ++  PD I+Y+TL+ GL K G ++ A  +  
Sbjct: 245 GVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLID 304

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM   G + D+    +L+ G C    +E DL E A++  ++M ++    D          
Sbjct: 305 EMRMKGLKPDKISYTTLIDGCC----KEGDL-ETAFEHRKRMIQENIRLDD--------- 350

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
                                     + +  +I  LC EG+   A  +L  M      P 
Sbjct: 351 --------------------------VAYTALISGLCQEGRSIDAEKMLREMLSVGLRPD 384

Query: 440 RTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
             +Y M+I +  +    +    L     + G +P
Sbjct: 385 TGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 418



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 40/294 (13%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
           ++  F+ L+ +  +SG L++A+E               T   +L+ L  +   +  +   
Sbjct: 69  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFY 128

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             +   G    +Y +  +M  FCK G    A+ + +   + G+ P+VV+FNTL NGY + 
Sbjct: 129 KEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRL 188

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   +G  L   M      PD  +YS L+NGL K  K                       
Sbjct: 189 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK----------------------- 225

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
                            ++DA ++F++M  K  V +  T+  +I    K  + D A+   
Sbjct: 226 -----------------MDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVY 268

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
              +     P  IT+N +I  LC +G + +A  L+  M      P + SY  LI
Sbjct: 269 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLI 322


>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Vitis vinifera]
          Length = 498

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 172/363 (47%), Gaps = 5/363 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   LK  I++ D +   G       +N +L  +      + A+ F+ +    G      
Sbjct: 121 KKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLI 180

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++++I   C      +A +V++ M   G +P++ T+  LVN  CK G+ ++   ++  +
Sbjct: 181 TYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNL 240

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  PN  TYN LL  LC  G  +E  E+L+ +      P V TY  +++G CK G  
Sbjct: 241 LSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLL 300

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+   ++ +     P+++T+NTL    CKEG   + + LL  +    C P  I+Y+ +
Sbjct: 301 DRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIV 360

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K G +  A+ ++ EM+  GF  D+    +L  GL        DL+EDA  + ++M
Sbjct: 361 IDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLF-----RLDLVEDALVILKEM 415

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K+        +  VI  L K KK D A+  L   +     P    ++ +I+ +   G I
Sbjct: 416 NKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAAGMI 475

Query: 422 DKA 424
           ++A
Sbjct: 476 EEA 478



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 149/296 (50%), Gaps = 5/296 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + +++ + +  +G    +  +N L+       + E          S+G+ PN+ T++ ++
Sbjct: 197 QAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLL 256

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
              C    + E  +++  M      P V T+ IL+N LCK G L  A+   DQM    C 
Sbjct: 257 HSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCL 316

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           P+I TYN LL  LC  G V+EA  +L ++ +    P + TY  V+DG  K G   +AMEL
Sbjct: 317 PDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMEL 376

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
             E IERG  P+ +T  TLF G  +       + +LK M KRN      ++  +++GL K
Sbjct: 377 YGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCK 436

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
             K+  A+ + + MV    + +E + +++++G+         ++E+A Q+ +K+T+
Sbjct: 437 KKKVDIAIQVLEMMVSSQCKPNEEIYSAIIKGV-----GAAGMIEEANQLHQKLTE 487



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 156/344 (45%), Gaps = 7/344 (2%)

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C+K     A ++ID M      P   +   L+  L K    + A  VL  M   G  P+I
Sbjct: 50  CSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDI 109

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L+ GLC  G ++ A E+L  +   G  PD  TY  ++      G  ++A+    +
Sbjct: 110 ITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKD 169

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + +G    ++T+  L    CK    ++ + +L+ M    C PD ++Y++L+N   K GK
Sbjct: 170 QLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGK 229

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTD 369
                 I   ++  G   +    N+LL  LC    W+E D   +   +    ++  +V  
Sbjct: 230 YEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVD---EILLIMNTTSQPPTVV- 285

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY I+I  L K    D A+      +    +P  IT+N ++ ALC EG +D+AL LL 
Sbjct: 286 --TYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLH 343

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            + +    P   +Y+++I  L +      A  LYG  +++G  P
Sbjct: 344 SLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAP 387



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 153/321 (47%), Gaps = 5/321 (1%)

Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
           A +V+  M  +G  P++ T+ +LV  LCK G LK A+E+LD+M   GC P+  TYN +L+
Sbjct: 93  ATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILR 152

Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
            +   G  ++A     +    G    + TYT +++  CK   + +AME+L +    G  P
Sbjct: 153 CMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYP 212

Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
           ++VT+N+L N  CK+G       ++  +      P+ ++Y+TLL+ L   G       I 
Sbjct: 213 DIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEIL 272

Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
             M            N L+ GLC     +  LL+ A   F++M     + D  TY  ++ 
Sbjct: 273 LIMNTTSQPPTVVTYNILINGLC-----KYGLLDRAINFFDQMVSHNCLPDIITYNTLLA 327

Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
            L K    DEAL  LH   +    P  IT+N VI  L  +G ++KA+ L   M E    P
Sbjct: 328 ALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAP 387

Query: 439 SRTSYDMLITKLDQLEKSYDA 459
              ++  L   L +L+   DA
Sbjct: 388 DDITHRTLFWGLFRLDLVEDA 408



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 114/261 (43%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           I  ++   G   +   +N LL +L      +   +     ++    P   T++I+I   C
Sbjct: 236 IIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLC 295

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                  A    D M  +   P++ T+  L+ +LCK G + EAL +L  +    C P + 
Sbjct: 296 KYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLI 355

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN ++ GL   G +E+A E+   +   G  PD  T+  +  G  ++    +A+ +L E 
Sbjct: 356 TYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEM 415

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
            +R        F  + +G CK+      + +L++M    C P++  YS ++ G+   G I
Sbjct: 416 NKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAAGMI 475

Query: 312 RPAVSIFKEMVRFGFEVDERM 332
             A  + +++       +E M
Sbjct: 476 EEANQLHQKLTELKVFREETM 496



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 32/258 (12%)

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
           D  T   ++   C  G+   A  L++    R   P   +   L  G  K  +  +   +L
Sbjct: 38  DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 97

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL--- 340
           K+M     +PD I+Y+ L+ GL K G ++ A+ +  EM   G   D    N++LR +   
Sbjct: 98  KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDH 157

Query: 341 -----CMKSWEEK-------------DLLE---------DAYQVFEKMTKKVSVTDPGTY 373
                 +  W+++              L+E          A +V E M  +    D  TY
Sbjct: 158 GGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTY 217

Query: 374 -GIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMY 432
             +V  T  +GK  D ALI +++ +  G  P T+T+N ++ +LC  G  D+   +L +M 
Sbjct: 218 NSLVNYTCKQGKYEDTALI-IYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMN 276

Query: 433 EHAKIPSRTSYDMLITKL 450
             ++ P+  +Y++LI  L
Sbjct: 277 TTSQPPTVVTYNILINGL 294


>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 206/433 (47%), Gaps = 25/433 (5%)

Query: 12  FTNTNRRNHNKIP-QFNKLVVFAAASLSTAESL--DLKENPRSLQAQRFVDRIKA----- 63
           +TN  R +H       ++LV  +A     AE L   +KE   ++    F+   +A     
Sbjct: 42  YTNGFRHSHQTFSLMISRLV--SANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVH 99

Query: 64  SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
            PL + + +F  +K+     S   +  +   LV  N+ + A++F+      G+ P+  + 
Sbjct: 100 KPL-DAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASL 158

Query: 124 SIMIRCYC-NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
           +++I+  C N      A ++   M + G  P+  T+  L+  LC+ G++ EA E+  +M 
Sbjct: 159 NVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEME 218

Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
              C P + TY  L+ GLC    ++ A  +L  + + G+KP+V+TY+++MDG CK G S+
Sbjct: 219 TKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSS 278

Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
            A+ELL+  + R   PN++T++TL +G CKEG   + V +L  MK +   PD   Y  ++
Sbjct: 279 RALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKII 338

Query: 303 NGLLKWGKIRPAVSIFKEMV-------RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
           +G     K   A +   EMV       R  + +  R+ N +++GLC +          A+
Sbjct: 339 SGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNR------AF 392

Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           Q++  M  +    D  T+  ++          +A   +   +  G IP   T+N V+ A 
Sbjct: 393 QLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAF 452

Query: 416 CGEGKIDKALLLL 428
               K+ ++  L+
Sbjct: 453 WDRRKVRESAELV 465



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 202/432 (46%), Gaps = 27/432 (6%)

Query: 29  LVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDF 88
           +V+F +A+              SL   R V    A+  +   ++   +K++  N +   F
Sbjct: 32  IVIFDSATAEYTNGFRHSHQTFSLMISRLVS---ANHFRLAEELLCRMKEEKCNITEDIF 88

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
             +  A   +++   AV+ F +   Y   P+  ++  +      +N    A +    M +
Sbjct: 89  LSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMRE 148

Query: 149 NGYHPNVTTFTILVNSLCK-SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            G  P+V +  +L+ +LCK SG +  AL +  +M   GC P+  TY  L+ GLC +G++ 
Sbjct: 149 MGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIG 208

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA E+   ++     P V TY +++ G C+    + A+ LL E   +G+ PNV T+++L 
Sbjct: 209 EAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLM 268

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
           +G+CK G   + + LL +M  R  LP+ I+YSTL++GL K GK++ AV I   M   G  
Sbjct: 269 DGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLR 328

Query: 328 VDERMMNSLLRGLCMKSWEEKDL--LEDAYQVFEKMTKKVSVTDPGTYGIVIR---TLGK 382
            D  +   ++ G C       D+    +A    ++M       +  T+ + +R    + +
Sbjct: 329 PDAGLYGKIISGFC-------DICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQ 381

Query: 383 GKKTDEALIHLHHAIEMGHIPRT-------ITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
           G  T+    H + A ++    RT        TF++++   C +G + KA  L+  M    
Sbjct: 382 GLCTE----HPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDG 437

Query: 436 KIPSRTSYDMLI 447
            IP   +++ ++
Sbjct: 438 CIPDEXTWNAVV 449



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 142/330 (43%), Gaps = 6/330 (1%)

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
           + NG+  +  TF+++++ L  +   + A E+L +M    C      +  + +    V + 
Sbjct: 42  YTNGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKP 101

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            +A  +   +K    +P   +Y  V        +   A+       E G+ P+V + N L
Sbjct: 102 LDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVL 161

Query: 267 FNGYCK-EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
               CK  GT    + + + M  R C P   +Y TL+ GL + GKI  A  +FKEM    
Sbjct: 162 IKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKA 221

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
                    SL+ GLC    + KDL + A ++ E+M  K    +  TY  ++    K   
Sbjct: 222 CSPTVVTYXSLIHGLC----QSKDL-DSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGC 276

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
           +  AL  L   +   H+P  IT++ ++  LC EGK+ +A+ +L  M      P    Y  
Sbjct: 277 SSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGK 336

Query: 446 LITKLDQLEKSYDACALYGAALKQGVIPQR 475
           +I+    + K ++A       +  G+ P R
Sbjct: 337 IISGFCDICKFHEAANFLDEMVLGGISPNR 366


>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
 gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
          Length = 481

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 178/363 (49%), Gaps = 5/363 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L+  ID+ + +   G    V  +N ++ +L    + + AV+F+      G  P   
Sbjct: 104 KRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLI 163

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++I+I           A +V++ M   G +P++ T+  LVN   K G+ ++A  ++  +
Sbjct: 164 PYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNI 223

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +PN  TYN LL  LC  G  +E  E+L  +K     P V TY  +++G CK G  
Sbjct: 224 LSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLV 283

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A+    + +    +P+++T+NTL    CKEG   + + +  L+   NC P  I+Y+T+
Sbjct: 284 ERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTV 343

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL + G +  A+ ++ +M+  G   D     SL+ G C   W   D +EDA ++  +M
Sbjct: 344 IDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFC---W--IDQVEDAVEILREM 398

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
            K+    +   Y +VI  L + K+ D A+  L   I   + P    ++ +I+++   G +
Sbjct: 399 GKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMV 458

Query: 422 DKA 424
           ++A
Sbjct: 459 EEA 461



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 163/344 (47%), Gaps = 7/344 (2%)

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C K    EA K+ID M      PN T  T L+  L + GR++ A  VL  M   G  P++
Sbjct: 33  CKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVMSGLVPDV 92

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN ++ G C   ++  A ++L ++   G  PDV TY  ++      G+ ++A+E    
Sbjct: 93  ITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRG 152

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            + RG  P ++ +  L     K    ++ + +L+ M    C PD ++Y++L+N   K GK
Sbjct: 153 QLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGK 212

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSVTD 369
              A  I   ++  G E +    NSLL  LC    W+E D   +   + +K +   +V  
Sbjct: 213 YEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVD---EILAIMKKTSHPPTVV- 268

Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
             TY I+I  L K    + A+      +     P  IT+N ++ ALC EG +D+AL +  
Sbjct: 269 --TYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFV 326

Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           L+ +    P   +Y+ +I  L +     +A  LY   +++G+ P
Sbjct: 327 LLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAP 370



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 156/295 (52%), Gaps = 5/295 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++ + +  +G    +  +N L+       + E A        S+G+ PN+ T++ ++  
Sbjct: 182 LEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHS 241

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C+   + E  +++  M    + P V T+ IL+N LCK G ++ A+    QM    C P+
Sbjct: 242 LCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPD 301

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           I TYN LL  LC  G V+EA ++ + + +    P + TY  V+DG  + G  +EA++L N
Sbjct: 302 IITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYN 361

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
           + IE+G+ P+ +T  +L  G+C        V +L+ M KR+   +  +Y  ++NGL +  
Sbjct: 362 QMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNK 421

Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           ++  A+ + + M+   ++ DE + ++L+     KS  +  ++E+A ++ +K+ ++
Sbjct: 422 RVDIAIQVLEMMISGRYKPDEEIYSTLI-----KSVADAGMVEEADELHQKLIER 471



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 184/399 (46%), Gaps = 44/399 (11%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N++L  L        A K     S     PNS   + +IR          A +V+  M  
Sbjct: 26  NEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVM 85

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
           +G  P+V T+ ++V   CK  +L+ A+++L+ M   GC P++ TYN +++ L   G+ ++
Sbjct: 86  SGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQ 145

Query: 209 AY-----------------------------------EMLMNVKNDGLKPDVYTYTAVMD 233
           A                                    E+L ++  +G  PD+ TY ++++
Sbjct: 146 AVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVN 205

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
              K G+  +A  ++   +  G+ PN +T+N+L +  C  G   +   +L +MKK +  P
Sbjct: 206 FASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPP 265

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
             ++Y+ L+NGL K G +  A++ F +MV      D    N+LL  LC     ++ ++++
Sbjct: 266 TVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALC-----KEGMVDE 320

Query: 354 AYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
           A QVF  ++   S   PG  TY  VI  L +    DEAL   +  IE G  P  IT  ++
Sbjct: 321 ALQVFVLLSD--SNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSL 378

Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +   C   +++ A+ +L  M +     + ++Y ++I  L
Sbjct: 379 VWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGL 417



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 128/263 (48%), Gaps = 11/263 (4%)

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
           +T N +L  LC  G + EA +++  +      P+    T ++ G  ++GR   A  +L  
Sbjct: 23  ETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKT 82

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            +  G+ P+V+T+N +  G+CK       + LL+ M    C PD I+Y+T++  L   GK
Sbjct: 83  MVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGK 142

Query: 311 IRPAVSIFKEMVRFG---FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
              AV  ++  +R G   + +   ++  L+       W+    +  A +V E M  +   
Sbjct: 143 FDQAVEFWRGQLRRGCLPYLIPYTILIELV-------WKHCGTVR-ALEVLEDMAIEGCY 194

Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
            D  TY  ++    K  K ++A + +++ +  G  P  IT+N+++ +LC  G  D+   +
Sbjct: 195 PDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEI 254

Query: 428 LFLMYEHAKIPSRTSYDMLITKL 450
           L +M + +  P+  +Y++LI  L
Sbjct: 255 LAIMKKTSHPPTVVTYNILINGL 277



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 91/195 (46%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++  I+ F  +  +  +  +  +N LL AL      + A++ F   S    +P   
Sbjct: 279 KCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLI 338

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I     +    EA K+ + M + G  P+  T   LV   C   ++++A+E+L +M
Sbjct: 339 TYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREM 398

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           G+   + N   Y  ++ GLC   RV+ A ++L  + +   KPD   Y+ ++      G  
Sbjct: 399 GKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMV 458

Query: 242 NEAMELLNEAIERGV 256
            EA EL  + IER V
Sbjct: 459 EEADELHQKLIERKV 473


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 178/352 (50%), Gaps = 5/352 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I + ++ +G   +V  +  L+ +L    +       F+E  +  +  + + ++ +I  Y
Sbjct: 233 EILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAY 292

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
           C   +   A KV+D    NG  PN  T+ +L+N  CK G+++ A  +L  M   G   N 
Sbjct: 293 CRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQ 352

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
             +N ++ G C  G V++A ++   ++  G++ D+YTY  +  G C+V R +EA  LL+ 
Sbjct: 353 IIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHI 412

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
            IE GV PN VT+ TL + +CK+G  ++   L + M ++   P  ++Y+ +++G  K G 
Sbjct: 413 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGS 472

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           IR A    KEM + GF  D     SL+ G C+        ++ A ++FE+M ++ +  + 
Sbjct: 473 IREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGK-----VDVALKLFEEMKQRGTEPNV 527

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
             Y  +I  L K  +++ A       ++ G IP    ++ ++ +L  + + D
Sbjct: 528 VAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 579



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 187/400 (46%), Gaps = 6/400 (1%)

Query: 52  LQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE 110
           L A   VD + K+  + +   + D + + G + +   +N LL   V   +     +    
Sbjct: 178 LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 237

Query: 111 ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR 170
             + G+     T++I++       D  +   + + M  N    +V  +T ++N+ C++G 
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297

Query: 171 LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
           ++ A +VLD+    G +PN +TY  L+ G C +G++E A  +L +++  G+  +   +  
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357

Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
           ++DG+C+ G  ++A+++     + GV  ++ T+NTL  G C+     +   LL +M +  
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417

Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
            +P+ ++Y+TL++   K G +  A  +F+EM   G        N ++ G     + +K  
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDG-----YTKKGS 472

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           + +A +  ++M KK  V D  TY  ++       K D AL       + G  P  + +  
Sbjct: 473 IREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTA 532

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
           +I  L  EG+ + A  L   M +   IP  + Y  L+  L
Sbjct: 533 LISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 181/378 (47%), Gaps = 10/378 (2%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A + F E    GLAPN  T++ ++  Y       +   + + M   G  PN+ T+  L+ 
Sbjct: 57  ARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIG 116

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
             C++G  + A  + D+M   G   N+ +YN L+ GLC  G++ +A ++L  ++ +G +P
Sbjct: 117 EWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRP 176

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
            + T+  ++DG+ K G+ + A+   N+    G  P+ VT+N L  G+C+     +    L
Sbjct: 177 SIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRAL 236

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             MK+R   P K++Y+ L++   +   +  A  I   M + G EVD      L+R LCM+
Sbjct: 237 SDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCME 296

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
                  ++DA ++F+ M +K        Y ++I   G+   + +AL  +    + G IP
Sbjct: 297 GN-----MKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIP 351

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
            + ++   I+ LC + K  +A  LL  M E  +  +    + + +K D  +K  D C  +
Sbjct: 352 NSASYGLTIRVLCKDDKCQEAEALLDDM-ETIRSFAGHHQNFIASKSDSQQKDEDKCTEH 410

Query: 464 ----GAALKQGVIPQRKP 477
                  L   ++P  KP
Sbjct: 411 FLQNKGLLSLSILPISKP 428



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 164/355 (46%), Gaps = 7/355 (1%)

Query: 121 W-TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHP-NVTTFTILVNSLCKSGRLKEALEVL 178
           W T +  +R  C   D   A  ++     +G    +VT  T LVN  CK G + EA  V 
Sbjct: 2   WGTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVF 61

Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
           D+M  +G  PN  TY  L+ G    G+ E+ + +   ++  G++P++YTY  ++  +C+ 
Sbjct: 62  DEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRT 121

Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
           G    A  L +E   RG+  NVV++NTL  G C+ G       LL +M+     P  I++
Sbjct: 122 GEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITF 181

Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
           + L++G  K GK+  A+  F +M   GF+      N L+ G C      +D+   A +  
Sbjct: 182 NLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFC----RARDMTR-ANRAL 236

Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
             M ++       TY I+I +  +     +A   L    + G      T+  +++ALC E
Sbjct: 237 SDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCME 296

Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           G +  A  L   M E    PS   YDM+I    +   SY A  L     ++G+IP
Sbjct: 297 GNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIP 351



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 150/328 (45%), Gaps = 5/328 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + E   +FD +   G   +   +  L+       ++E     F E    G+ PN +
Sbjct: 50  KGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLY 109

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C   +F  AR + D M   G   NV ++  L+  LC+ G+L +A ++LD M
Sbjct: 110 TYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMM 169

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G +P+I T+N L+ G    G++  A      +K  G +P   TY  ++ GFC+    
Sbjct: 170 RTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDM 229

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             A   L++  ERG+ P  VT+  L + + +E    K   +L  M+K     D  +Y  L
Sbjct: 230 TRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVL 289

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +  L   G ++ A  +F+ M   G E    + + ++ G   +    K     A ++  +M
Sbjct: 290 VRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYK-----ALKLIMEM 344

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
            +K  + +  +YG+ IR L K  K  EA
Sbjct: 345 RQKGLIPNSASYGLTIRVLCKDDKCQEA 372



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 129/285 (45%), Gaps = 35/285 (12%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +F+ +++ G   ++  +N L+       E E A   F E    G+  N  +++ +I   C
Sbjct: 95  LFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLC 154

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                ++A K++D M   G  P++ TF +LV+   K+G++  AL   +QM   G +P+  
Sbjct: 155 RHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAV 214

Query: 192 TYNCLLKGLCYV-----------------------------------GRVEEAYEMLMNV 216
           TYN L+ G C                                       + +A+E+L  +
Sbjct: 215 TYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGM 274

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
           +  GL+ D +TY  ++   C  G   +A +L     E+GV P+ V ++ +  GY +EG+ 
Sbjct: 275 EKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSS 334

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
            K + L+  M+++  +P+  SY   +  L K  K + A ++  +M
Sbjct: 335 YKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 112/216 (51%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D ++ +GT  S+  FN L+       +   A+ FF++  + G  P++ T++++I  +C
Sbjct: 165 LLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFC 224

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
              D   A + +  M + G  P   T+TIL++S  +   + +A E+L  M + G + +  
Sbjct: 225 RARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAH 284

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TY  L++ LC  G +++A ++  ++   G++P    Y  ++ G+ + G S +A++L+ E 
Sbjct: 285 TYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEM 344

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
            ++G+ PN  ++       CK+    +   LL  M+
Sbjct: 345 RQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDME 380



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +   +  F+ +K  G   S   +N L+       +   A +  S+    GL P   
Sbjct: 190 KAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKV 249

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++I+I  +  +N   +A +++  M   G   +  T+ +LV +LC  G +K+A ++   M
Sbjct: 250 TYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSM 309

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
           G  G +P+   Y+ ++ G    G   +A +++M ++  GL P+  +Y   +   CK  + 
Sbjct: 310 GEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKC 369

Query: 242 NEAMELLNE 250
            EA  LL++
Sbjct: 370 QEAEALLDD 378



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 53/114 (46%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +I   ++K G       +  L+ AL M    + A K F      G+ P++  + +MI  Y
Sbjct: 269 EILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGY 328

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
             +   ++A K+I  M   G  PN  ++ + +  LCK  + +EA  +LD M  I
Sbjct: 329 GREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETI 382


>gi|357512797|ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355520709|gb|AET01163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 501

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 158/298 (53%), Gaps = 10/298 (3%)

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM---FDNG 150
           +L   +  + AV+   E SS   +P+ ++++ +++  C           ID M   FD  
Sbjct: 172 SLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFD-- 229

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PN+ T+TIL++++C +  L+EA  ++D +   G KP+   YN ++KG C + R  EA 
Sbjct: 230 VKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAI 289

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           E+   +K  G++PD+ TY  ++ G  K GR +EA +LL    E+G  P+ VT+ +L NG 
Sbjct: 290 EVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGM 349

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C++G  +  + LL+ M+ + C P+  +Y+TLL+GL K      A+ ++  M   G ++D 
Sbjct: 350 CRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDM 409

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
               + +R LC         + DAY+VF+   +  S++D   Y  +  TL   KK  E
Sbjct: 410 ASYATFVRALC-----SVGRVADAYEVFDYAVESKSLSDVAAYSTLESTLKWFKKAKE 462



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 151/287 (52%), Gaps = 6/287 (2%)

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
           S G++P+  T  + +R  C  +   +A ++I  +      P++ ++  LV +LCKS  L 
Sbjct: 156 SDGISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLS 215

Query: 173 EALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
                +D+M  +   KPN+ TY  L+  +C    + EA  ++  ++ +G KPD + Y  +
Sbjct: 216 LVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTI 275

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           M G+C + R +EA+E+ N   E+GV P+++T+NTL  G  K G   +   LL++M ++  
Sbjct: 276 MKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGH 335

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            PD+++Y++L+NG+ + G+   A+++ +EM   G   +    N+LL GLC     +  + 
Sbjct: 336 FPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLC-----KSRMF 390

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIE 398
           + A +++  M       D  +Y   +R L    +  +A     +A+E
Sbjct: 391 DKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVFDYAVE 437



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 107/201 (53%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E   + D ++++G       +N ++    ML+    A++ ++     G+ P+  T++ 
Sbjct: 250 LREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNT 309

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I          EA+K++  M + G+ P+  T+T L+N +C+ G    AL +L++M   G
Sbjct: 310 LIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKG 369

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN  TYN LL GLC     ++A E+   +K+DGLK D+ +Y   +   C VGR  +A 
Sbjct: 370 CSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAY 429

Query: 246 ELLNEAIERGVTPNVVTFNTL 266
           E+ + A+E     +V  ++TL
Sbjct: 430 EVFDYAVESKSLSDVAAYSTL 450



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 153/343 (44%), Gaps = 14/343 (4%)

Query: 138 EARKVIDCMFDNGYHPNVTTF-TILVNSLCKSGRLKEALEVLDQMGRI--GCKPNIQTYN 194
           EA+ + +   ++   P  + F   L+ S      + +++  L  M +      P+  TY+
Sbjct: 68  EAKSIFNSFVNSSNAPIDSRFHNSLLQSYASISTINDSIAFLRHMTKTHPSFSPDKSTYH 127

Query: 195 CLLKGLCY-----VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
            LL   C         +   ++ L  + +DG+ PD  T    +   C   R ++A+EL+ 
Sbjct: 128 ILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTADRVDDAVELIK 187

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK-KRNCLPDKISYSTLLNGLLKW 308
           E   +  +P++ ++N L    CK  T       +  M+ K +  P+ ++Y+ L++ +   
Sbjct: 188 ELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTILIDNVCNT 247

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
             +R A  +   +   GF+ D  + N++++G CM S        +A +V+ +M +K    
Sbjct: 248 KNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGS-----EAIEVYNRMKEKGVEP 302

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           D  TY  +I  L K  +  EA   L    E GH P  +T+ +++  +C +G+   AL LL
Sbjct: 303 DLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALL 362

Query: 429 FLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
             M      P+  +Y+ L+  L +      A  LYGA    G+
Sbjct: 363 EEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGL 405



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 142/326 (43%), Gaps = 11/326 (3%)

Query: 150 GYHPNVTTFTILVNSLCKSGRLKEAL-----EVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            + P+ +T+ IL+   CKS   K +      + L+ M   G  P+  T +  ++ LC   
Sbjct: 118 SFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTAD 177

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-GVTPNVVTF 263
           RV++A E++  + +    PD+Y+Y  ++   CK    +     ++E   +  V PN+VT+
Sbjct: 178 RVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTY 237

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
             L +  C      +   L+ ++++    PD   Y+T++ G     +   A+ ++  M  
Sbjct: 238 TILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKE 297

Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
            G E D    N+L+ GL      +   + +A ++   M +K    D  TY  ++  + + 
Sbjct: 298 KGVEPDLITYNTLIFGL-----SKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRK 352

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
            +T  AL  L      G  P T T+N ++  LC     DKA+ L   M          SY
Sbjct: 353 GETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASY 412

Query: 444 DMLITKLDQLEKSYDACALYGAALKQ 469
              +  L  + +  DA  ++  A++ 
Sbjct: 413 ATFVRALCSVGRVADAYEVFDYAVES 438



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 26/121 (21%), Positives = 53/121 (43%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           +  L+  +    E   A+    E    G +PN+ T++ ++   C    F +A ++   M 
Sbjct: 342 YTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMK 401

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            +G   ++ ++   V +LC  GR+ +A EV D         ++  Y+ L   L +  + +
Sbjct: 402 SDGLKLDMASYATFVRALCSVGRVADAYEVFDYAVESKSLSDVAAYSTLESTLKWFKKAK 461

Query: 208 E 208
           E
Sbjct: 462 E 462


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 158/307 (51%), Gaps = 5/307 (1%)

Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
           P+  T+  +V  LCK+ R+ +AL  +++M   G KP+   YN +L GLC   +VEEA  +
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
              +    + P+V TY  +++G CK  R   A EL  E   +G  P  V++NTL +G+CK
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
           +   +    +   M + NC+P+ ++Y+TL++GL K GK++ A  +   MV+ G   +   
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
            + L+ G C     +   +++A+++ E+M  +       TY I++ +L +  K ++A   
Sbjct: 187 YSCLIDGFC-----KVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKL 241

Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
                +    P  +T+N +++ALC   ++D A  L   M      P   +YD L   L +
Sbjct: 242 FRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTR 301

Query: 453 LEKSYDA 459
             K ++A
Sbjct: 302 AGKVHEA 308



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 149/307 (48%), Gaps = 3/307 (0%)

Query: 49  PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           P +L     V+R+ K   + + +   + +   G       +N +L  L    + E A   
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           F +     + PN  T++ +I   C       A ++   M   GY P   ++  L++  CK
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
              L  A +V D+M R  C PN+ TY  L+ GL   G+V+ A E+L  +   G+ P+V T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y+ ++DGFCKV R +EA +LL + + +G+ P VVT+N L N  C+         L + M 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM--KSW 345
           +R C P  ++Y+TLL  L    ++  A  ++ EM+  G   D    ++L  GL    K  
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 346 EEKDLLE 352
           E ++L+E
Sbjct: 307 EAQELME 313



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 5/222 (2%)

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           + R   P+ +T+  +    CK       +  ++ M  R   PD   Y+ +L+GL +  K+
Sbjct: 1   MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKV 60

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A  +F++MV+     +    N+L+ GLC K+W     +E AY++F++M  K  V    
Sbjct: 61  EEARLLFEKMVKQRINPNVVTYNTLINGLC-KAWR----IETAYELFKEMAGKGYVPTEV 115

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           +Y  +I    K K    A       +    +P  +T+  +I  L   GK+  A  +L  M
Sbjct: 116 SYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGM 175

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +    P+  +Y  LI    ++ +  +A  L    + QG+ P
Sbjct: 176 VKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAP 217


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 203/438 (46%), Gaps = 44/438 (10%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K+    E ++++ ++ +DG + SV  ++ L+++     + +T +   +E  + G+ PN 
Sbjct: 189 VKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNV 248

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA------ 174
           ++++I IR       F EA +++  M D+G  P+V T T+++  LC +GRL +A      
Sbjct: 249 YSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWK 308

Query: 175 -----------------------------LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR 205
                                        +E+ + M   G   NI +Y  ++  LC VGR
Sbjct: 309 MKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGR 368

Query: 206 VEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNT 265
           ++EA  +   +K  G+ P+ Y+Y +++ GF K    + A+EL N     G +PN  T   
Sbjct: 369 LDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVL 428

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
             N Y K G  +K +   + MK +  +PD  + + +L+ L + G++  A  +F E+   G
Sbjct: 429 FINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMG 488

Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
              D     ++   + +K   +    ++A   F  M +   V D      +I TL KG K
Sbjct: 489 VSPD-----TITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGK 543

Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
            +EA    H   EM   P   T+N ++  L  EGK+ + + LL  M      P+  +Y+ 
Sbjct: 544 GNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYN- 602

Query: 446 LITKLDQLEKSYDA-CAL 462
             T LD L K+ +  CA+
Sbjct: 603 --TVLDCLSKNGEVNCAI 618



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 160/321 (49%), Gaps = 5/321 (1%)

Query: 104  AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
            A + F++    G++  + +++ +IR   ++N    A  +   M   G  P+  T+ ++++
Sbjct: 757  AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 816

Query: 164  SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            ++ KS R++E L V  +M R G +    TYN ++ GL    R+E+A ++  N+ ++G  P
Sbjct: 817  AMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP 876

Query: 224  DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
               TY  ++DG  K G+  +A  L NE +E G  PN   +N L NG+   G       + 
Sbjct: 877  TPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIF 936

Query: 284  KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
            + M ++   PD  SY+ L++ L   G++   +S F++++  G E D  + N L+ GL   
Sbjct: 937  EKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGL--- 993

Query: 344  SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
               + + +E+A  +F +M KK  V +  TY  +I  LGK  K  EA       +  G  P
Sbjct: 994  --GKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKP 1051

Query: 404  RTITFNNVIQALCGEGKIDKA 424
               T+N +I+     G  D A
Sbjct: 1052 NVFTYNALIRGYSVSGSTDNA 1072



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 184/403 (45%), Gaps = 7/403 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +A+   E   I   ++  G    V     ++  L        A   F +  +    P+  
Sbjct: 260 QAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRV 319

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  ++    +  D     ++ + M  +GY+ N+ ++T +V++LC+ GRL EAL V D+M
Sbjct: 320 TYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEM 379

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
              G  P   +YN L+ G       + A E+  ++   G  P+ YT+   ++ + K G+S
Sbjct: 380 KEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQS 439

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            +A++       +G+ P+V   N + +   + G       +   +K     PD I+Y+ +
Sbjct: 440 LKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMM 499

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           +    K  K   A++ F +MV  G   D   +NSL+  L            +A+++F ++
Sbjct: 500 IKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKG-----NEAWKLFHQL 554

Query: 362 TK-KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
            + K+  T+ GTY  ++  LG+  K  E +  L       H P  IT+N V+  L   G+
Sbjct: 555 KEMKIEPTN-GTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGE 613

Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
           ++ A+ +L+ M E    P  +SY+ ++  L + E+  +A  ++
Sbjct: 614 VNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMF 656



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 158/304 (51%), Gaps = 8/304 (2%)

Query: 61   IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
            +K+  L++ ID++ ++  +G + +   +  LL  L+   +   A   F+E   YG  PN 
Sbjct: 854  VKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNC 913

Query: 121  WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
              ++I++  +    +     ++ + M + G +P++ ++T+L+++LC +GRL + L    Q
Sbjct: 914  TIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQ 973

Query: 181  MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
            +  +G +P++  YN L+ GL    R+EEA  +   +K  G+ P++YTY +++    K G+
Sbjct: 974  LLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGK 1033

Query: 241  SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
            ++EA ++  E + +G  PNV T+N L  GY   G+              +C+   +S  T
Sbjct: 1034 ASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYA------AYDCVAVGVSLKT 1087

Query: 301  -LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
             L++GL+    I  A  +F EM R G   D+   N +L  +  KS   +++L+   ++ E
Sbjct: 1088 ALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIG-KSMRIEEMLKVQEEIAE 1146

Query: 360  KMTK 363
             + +
Sbjct: 1147 DLNQ 1150



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/469 (22%), Positives = 201/469 (42%), Gaps = 65/469 (13%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           I  ++ +K  G    V+  N +L +L        A + F E    G++P++ T+++MI+C
Sbjct: 443 IQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKC 502

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
               +   EA      M + G  P+V     L+++L K G+  EA ++  Q+  +  +P 
Sbjct: 503 CSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPT 562

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
             TYN LL GL   G+V+E   +L  + +    P++ TY  V+D   K G  N A+ +L 
Sbjct: 563 NGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLY 622

Query: 250 EAIERGVTPNVVTFNTLFNGYCKEG---------TPMKGV------------------GL 282
              E+G TP++ ++NT+  G  KE            MK +                  GL
Sbjct: 623 SMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGL 682

Query: 283 LK--------LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
           +K         + K +C  DK S+ +L+ G+L    +  ++   + +   G  +++  + 
Sbjct: 683 MKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLC 742

Query: 335 SLLRGLC------------------------------MKSWEEKDLLEDAYQVFEKMTKK 364
            L+R LC                              ++   +++L++ A  +F +M + 
Sbjct: 743 PLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL 802

Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
               D  TY +++  +GK  + +E L         G+    +T+N +I  L    ++++A
Sbjct: 803 GCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQA 862

Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           + L + +      P+  +Y  L+  L +  K  DA  L+   L+ G  P
Sbjct: 863 IDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKP 911



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 175/398 (43%), Gaps = 55/398 (13%)

Query: 68   ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
            E   +F+  K  G +     +N L+  LV  N  + A   F+E    G  P+ +T+++++
Sbjct: 756  EAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLIL 815

Query: 128  RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV---------- 177
                      E  +V   M   GY     T+  +++ L KS RL++A+++          
Sbjct: 816  DAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFS 875

Query: 178  -------------------------LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
                                      ++M   GCKPN   YN LL G    G  E   ++
Sbjct: 876  PTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQI 935

Query: 213  LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
               +   G+ PD+ +YT ++D  C  GR N+ +    + +E G+ P+++ +N L +G  K
Sbjct: 936  FEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGK 995

Query: 273  EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
                 + V L   MKK+  +P+  +Y++L+  L K GK   A  +++E++  G++ +   
Sbjct: 996  SERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFT 1055

Query: 333  MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
             N+L+RG     +      ++AY  ++ +   VS+      G+V          DE LI+
Sbjct: 1056 YNALIRG-----YSVSGSTDNAYAAYDCVAVGVSLKTALISGLV----------DENLIN 1100

Query: 393  LHHAI--EM---GHIPRTITFNNVIQALCGEGKIDKAL 425
            +   +  EM   G  P   T+N ++ A+    +I++ L
Sbjct: 1101 IAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEML 1138



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 193/440 (43%), Gaps = 42/440 (9%)

Query: 70   IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
            I +  S+ + G    +S +N ++  L+     E A + F +     LAP+  T   ++  
Sbjct: 618  IGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDYATLCTILPS 676

Query: 130  YCNKNDFFEARKVI-------DCMFD-NGYHP-------------------NVTTFTILV 162
            +       EA   +       DC  D + +H                    N+ +  IL+
Sbjct: 677  FVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILL 736

Query: 163  NS---------LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
            N          LCK  +  EA ++ ++   +G      +YN L++GL     ++ A ++ 
Sbjct: 737  NDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLF 796

Query: 214  MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
              +K  G  PD +TY  ++D   K  R  E + +  E   +G     VT+NT+ +G  K 
Sbjct: 797  TEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKS 856

Query: 274  GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
                + + L   +      P   +Y  LL+GLLK GK+  A ++F EM+ +G + +  + 
Sbjct: 857  KRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIY 916

Query: 334  NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            N LL G  +    E     +  Q+FEKM ++    D  +Y ++I TL    + ++ L + 
Sbjct: 917  NILLNGHRIAGNTE-----NVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYF 971

Query: 394  HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
               +E+G  P  I +N +I  L    +I++A+ L   M +   +P+  +Y+ LI  L + 
Sbjct: 972  RQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKA 1031

Query: 454  EKSYDACALYGAALKQGVIP 473
             K+ +A  +Y   L +G  P
Sbjct: 1032 GKASEAAQMYEELLIKGWKP 1051



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 160/325 (49%), Gaps = 6/325 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L E + +FD +K+ G +     +N L+   +  +  + A++ F+  ++ G +PN +T  +
Sbjct: 369 LDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVL 428

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
            I  Y       +A +  + M   G  P+V     +++SL +SGRL  A  V  ++  +G
Sbjct: 429 FINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMG 488

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
             P+  TY  ++K      + +EA     ++   G  PDV    +++D   K G+ NEA 
Sbjct: 489 VSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAW 548

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           +L ++  E  + P   T+NTL +G  +EG   + + LL+ M      P+ I+Y+T+L+ L
Sbjct: 549 KLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCL 608

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G++  A+ +   M   G   D    N+++ GL      +++  E+A+++F +M KK+
Sbjct: 609 SKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLI-----KEERFEEAFRMFCQM-KKI 662

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEAL 390
              D  T   ++ +  K     EAL
Sbjct: 663 LAPDYATLCTILPSFVKNGLMKEAL 687



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 152/329 (46%), Gaps = 10/329 (3%)

Query: 62   KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
            K+  ++E + +   + + G   +   +N ++  LV     E A+  +    S G +P   
Sbjct: 820  KSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPC 879

Query: 122  TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            T+  ++          +A  + + M + G  PN T + IL+N    +G  +   ++ ++M
Sbjct: 880  TYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKM 939

Query: 182  GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
               G  P+I++Y  L+  LC  GR+ +       +   GL+PD+  Y  ++DG  K  R 
Sbjct: 940  VEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERI 999

Query: 242  NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
             EA+ L NE  ++G+ PN+ T+N+L     K G   +   + + +  +   P+  +Y+ L
Sbjct: 1000 EEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNAL 1059

Query: 302  LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
            + G    G    A + + + V  G  +   +++ L+         +++L+  A  +F +M
Sbjct: 1060 IRGYSVSGSTDNAYAAY-DCVAVGVSLKTALISGLV---------DENLINIAEGLFAEM 1109

Query: 362  TKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
             ++    D  TY +++  +GK  + +E L
Sbjct: 1110 KRRGCGPDQFTYNLILDAIGKSMRIEEML 1138



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 140/333 (42%), Gaps = 5/333 (1%)

Query: 141 KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
           +V D M       NV TF  + + +   G L+ A   L  M   G   N  TYN L+  L
Sbjct: 129 QVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFL 188

Query: 201 CYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNV 260
              G   EA E+   +  DG+ P V TY+ +M  F K    +  + LLNE   RGV PNV
Sbjct: 189 VKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNV 248

Query: 261 VTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKE 320
            ++        +     +   +L  M+   C PD ++++ ++  L   G++  A  +F +
Sbjct: 249 YSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWK 308

Query: 321 MVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
           M +   +  +R+    L   C  S + + ++E    ++  M       +  +Y  V+  L
Sbjct: 309 M-KASDQKPDRVTYITLLDKCGDSGDSQSVME----IWNAMVADGYNDNIVSYTAVVDAL 363

Query: 381 GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSR 440
            +  + DEAL       E G  P   ++N++I         D+AL L   M      P+ 
Sbjct: 364 CQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNG 423

Query: 441 TSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            ++ + I    +  +S  A   Y     +G++P
Sbjct: 424 YTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVP 456



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 8/293 (2%)

Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
           GR+ +  +V D M +   K N+ T+  +  G+   G +  A   L  ++  G+  + YTY
Sbjct: 122 GRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTY 181

Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
             ++    K G   EAME+    +E G++P+V T++ L   + K+      + LL  M+ 
Sbjct: 182 NGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEA 241

Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
           R   P+  SY+  +  L +  +   A  I  +M   G + D      +++ LC     + 
Sbjct: 242 RGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLC-----DA 296

Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
             L DA  VF KM       D  TY  ++   G    +   +   +  +  G+    +++
Sbjct: 297 GRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSY 356

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT---KLDQLEKSYD 458
             V+ ALC  G++D+AL +   M E    P + SY+ LI+   K D  +++ +
Sbjct: 357 TAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALE 409


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 173/379 (45%), Gaps = 30/379 (7%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A+      + +G++PN + ++ +I   C   +F EA  + D M   G  PN  T++IL
Sbjct: 349 EEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSIL 408

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           ++  C+ G+L  AL  L +M  +G KP++  YN L+ G C  G +  A  ++  + N  L
Sbjct: 409 IDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKL 468

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
           +P V TYT++M G+C  G+ N+A+ L +E   +G+ P++ TF TL +G  + G     V 
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVK 528

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L   M + N  P++++Y+ ++ G  + G +  A     EM+  G   D      L+ GLC
Sbjct: 529 LFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLC 588

Query: 342 M--KSWEEKDL----------------------------LEDAYQVFEKMTKKVSVTDPG 371
           +  ++ E K                              LE+A  V + M  +    D  
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLV 648

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            YG++I    K K     L  L    + G  P  + + ++I A    G   +A  +  LM
Sbjct: 649 CYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708

Query: 432 YEHAKIPSRTSYDMLITKL 450
                +P+  +Y  +I  L
Sbjct: 709 INEGCVPNEVTYTAVINGL 727



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 167/341 (48%), Gaps = 5/341 (1%)

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
           V  +  L+  L  + E E  ++   E      +P+    S ++     +    EA  ++ 
Sbjct: 297 VVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVK 356

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            + + G  PN+  +  L++SLCK     EA  + D+MG+IG  PN  TY+ L+   C  G
Sbjct: 357 RVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRG 416

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           +++ A   L  + + GLKP VY Y ++++G CK G  + A  L+ E I + + P VVT+ 
Sbjct: 417 KLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYT 476

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
           +L  GYC +G   K + L   M  +  +P   +++TLL+GL + G IR AV +F EM  +
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEW 536

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
             + +    N ++ G C     E+  +  A++   +M +K  V D  +Y  +I  L    
Sbjct: 537 NVKPNRVTYNVMIEGYC-----EEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTG 591

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           +  EA + +    +       I +  ++   C EGK+++AL
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 189/410 (46%), Gaps = 40/410 (9%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           + + + ++  +   G   S+  F  LL  L        AVK F+E + + + PN  T+++
Sbjct: 488 INKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNV 547

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           MI  YC + +  +A + ++ M + G  P+  ++  L++ LC +G+  EA   +D + +  
Sbjct: 548 MIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C+ N   Y  LL G C  G++EEA  +  ++   G+  D+  Y  ++DG  K       +
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFL 667

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
            LL E  +RG+ P+ V + ++ +   K G   +  G+  LM    C+P++++Y+ ++NGL
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G +  A            E+           LC                  KM    
Sbjct: 728 CKAGFVNEA------------EI-----------LC-----------------SKMRPGN 747

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
           SV +  TYG  +  L KG    +  + LH+AI  G +  T T+N +I+  C +G++++A 
Sbjct: 748 SVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEAS 807

Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
            L+  M      P   +Y  +I++L +      A  L+ +  ++G+ P R
Sbjct: 808 ELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDR 857



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 179/382 (46%), Gaps = 7/382 (1%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           +++FD +   G    V  +  ++ +L  L +   A +   +  + G   N   ++++I  
Sbjct: 212 MELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDG 271

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C K   +EA  +   +      P+V T+  LV  LCK    +  LE++D+M R+   P+
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPS 331

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
               + L++GL   G+VEEA  ++  V   G+ P+++ Y A++D  CK GR+ +  ELL 
Sbjct: 332 EAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCK-GRNFDEAELLF 390

Query: 250 EAIER-GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
           + + + G+ PN VT++ L + +C+ G     +  L  M      P    Y++L+NG  K+
Sbjct: 391 DRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKF 450

Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
           G I  A S+  EM+    E       SL+ G C K    K     A +++ +MT K  V 
Sbjct: 451 GDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINK-----ALRLYHEMTGKGIVP 505

Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
              T+  ++  L +     +A+       E    P  +T+N +I+  C EG + KA   L
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFL 565

Query: 429 FLMYEHAKIPSRTSYDMLITKL 450
             M E   +P   SY  LI  L
Sbjct: 566 NEMIEKGIVPDTYSYRPLIHGL 587



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 165/345 (47%), Gaps = 5/345 (1%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G + ++  +N L+  L    +   AV    + +   L P+  T+  ++   C   +F   
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVG 316

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            ++ID M    + P+    + LV  L K G+++EAL ++ ++   G  PNI  YN L+  
Sbjct: 317 LEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDS 376

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
           LC     +EA  +   +   GL P+  TY+ ++D FC+ G+ + A+  L E I+ G+ P+
Sbjct: 377 LCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPS 436

Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
           V  +N+L NG+CK G       L+  M  +   P  ++Y++L+ G    GKI  A+ ++ 
Sbjct: 437 VYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496

Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
           EM   G         +LL GL         L+ DA ++F +M +     +  TY ++I  
Sbjct: 497 EMTGKGIVPSIYTFTTLLSGLF-----RAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEG 551

Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
             +     +A   L+  IE G +P T ++  +I  LC  G+  +A
Sbjct: 552 YCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA 596



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/411 (23%), Positives = 192/411 (46%), Gaps = 35/411 (8%)

Query: 67  KERIDIFDSIKKDGTNWSVSDFNDLL-----------MALVMLNEQETAVKFFSEASSY- 114
           K+ +D    I +   +W ++  ++L+           + +  +++ +  ++FF+    + 
Sbjct: 39  KQFVDSVRRIVRGKRSWEIALSSELVSRRLKTIHVEEILIGTIDDPKLGLRFFNFLGLHR 98

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEAR--------------KVIDCMF---DNGYHPNVTT 157
           G   ++ +F I+I      N F+ A               +V D +F   +     + ++
Sbjct: 99  GFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVFDALFSCYEKCKLSSSSS 158

Query: 158 FTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
           F +L+    +S R+ + + V   M  ++   P ++T + LL GL        A E+  ++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
            N G++PDVY YT V+   C++   + A E++ +    G   N+V +N L +G CK+   
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
            + VG+ K +  +   PD ++Y TL+ GL K  +    + +  EM+R  F   E  ++SL
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338

Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
           + GL      ++  +E+A  + +++ +     +   Y  +I +L KG+  DEA +     
Sbjct: 339 VEGL-----RKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRM 393

Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
            ++G  P  +T++ +I   C  GK+D AL  L  M +    PS   Y+ LI
Sbjct: 394 GKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLI 444



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 35/277 (12%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           +   L+E + +   +   G +  +  +  L+   +   +++  +    E    GL P+  
Sbjct: 624 REGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDV 683

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA------- 174
            ++ MI       DF EA  + D M + G  PN  T+T ++N LCK+G + EA       
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKM 743

Query: 175 ---------------LEVLDQ-MGRI------------GCKPNIQTYNCLLKGLCYVGRV 206
                          L++L + +G +            G   N  TYN L++G C  GR+
Sbjct: 744 RPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRM 803

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
           EEA E++  +  DG+ PD  TYT ++   C+     +A+EL N   E+G+ P+ V +NTL
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
            +G C  G   K   L   M ++   P+  +  T ++
Sbjct: 864 IHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900


>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 472

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 170/353 (48%), Gaps = 14/353 (3%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           + + +F  +K    + S   +  +L  LV  N+   A KF+      GL P   + +++I
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163

Query: 128 RCYCNKNDFFEAR-KVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  C  +   +A  K+   M   G  P+  T+  L++ LC+ GR+ EA ++  +M    C
Sbjct: 164 KALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P + TY  L+ GLC    V+EA   +  +K  G++P+V+TY+++MDG CK GRS +AME
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAME 283

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L    + RG  PN+VT+ TL  G CKE    + V LL  M  +   PD   Y  +++G  
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343

Query: 307 KWGKIRPAVSIFKEMV-------RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
              K R A +   EM+       R  + +  +  N ++RGLC       +    A+ ++ 
Sbjct: 344 AVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC------TNYPSRAFTLYL 397

Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
            M  +    +  T   +++ L K  +  +A+  +   +  G IP   T+  +I
Sbjct: 398 SMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLI 450



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 41/278 (14%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + IF  + K G +     +  L+  L      + A K F+E      AP   T++ +I  
Sbjct: 177 LKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236

Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
            C   +  EA + ++ M   G  PNV T++ L++ LCK GR  +A+E+ + M   GC+PN
Sbjct: 237 LCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           + TY  L+ GLC   +++EA E+L  +   GLKPD   Y  V+ GFC V +  EA   L+
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLD 356

Query: 250 EAIERGVTPNVVTFN-----------------------------------------TLFN 268
           E I  G+TPN +T+N                                         +L  
Sbjct: 357 EMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVK 416

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
             CK+G   K V L+  +    C+P+K ++  L+   L
Sbjct: 417 CLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTL 454



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 184/421 (43%), Gaps = 17/421 (4%)

Query: 66  LKERIDIFDSIKKDGTNWSVSD---FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
           +++ I +FDS   +  N  + D   F  ++  LV  N+ + A    +         +   
Sbjct: 29  VEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKAAEDIVARMKIENCVVSEDI 88

Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
              + R Y   +  F++ +V   M D    P+   +  ++  L +  +L  A +    M 
Sbjct: 89  LLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMR 148

Query: 183 RIGCKPNIQTYNCLLKGLCY-VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            IG  P + + N L+K LC   G V+   ++   +   G  PD YTY  ++ G C+ GR 
Sbjct: 149 EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRI 208

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           +EA +L  E +E+   P VVT+ +L NG C      + +  ++ MK +   P+  +YS+L
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSL 268

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++GL K G+   A+ +F+ M+  G   +     +L+ GLC    E+K  +++A ++ ++M
Sbjct: 269 MDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK---EQK--IQEAVELLDRM 323

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF-------NNVIQA 414
             +    D G YG VI       K  EA   L   I  G  P  +T+       N V++ 
Sbjct: 324 NLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRG 383

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           LC      +A  L   M          + D L+  L +  +   A  L    +  G IP 
Sbjct: 384 LC-TNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPN 442

Query: 475 R 475
           +
Sbjct: 443 K 443


>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
 gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
          Length = 584

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 174/346 (50%), Gaps = 11/346 (3%)

Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
           PN   F+ +I          +A + ++ M D G HP+V TFT+++   CK+  ++ A E+
Sbjct: 93  PNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEI 152

Query: 178 LDQMGRIG-CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMDGF 235
             +M +   C+P+   Y  L+ G C   R++ A E+L  ++ +  ++PDV  Y +++DG 
Sbjct: 153 FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 212

Query: 236 CKVGRSNEAMELLNEA-IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           C+  R  EA + L+E  + +G +P VVT+ +L  G CK       V +   M +R   P 
Sbjct: 213 CRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPT 272

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
            +SYS +++GL K G++  A  + +EM   G E++  +  +L+ GLC     +   L+DA
Sbjct: 273 IVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLC-----KSGFLDDA 327

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT-FNNVIQ 413
           Y ++  M +  +  +  TY  +I T  +  +T+ AL    H  +  + P  +  +  V+ 
Sbjct: 328 YALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRD--YCPLDVAMYTAVVS 385

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
            LC E ++D A  L   M          +Y++L+    + E+  +A
Sbjct: 386 GLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEA 431



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 183/415 (44%), Gaps = 52/415 (12%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI---- 143
           F  L+ AL        A +        G+ P+  TF++MIR +C       A ++     
Sbjct: 98  FASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMI 157

Query: 144 -------DC----MFDNGY----------------------HPNVTTFTILVNSLCKSGR 170
                  DC    +  +GY                       P+V  +  +V+ LC+S R
Sbjct: 158 KSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNR 217

Query: 171 LKEALEVLDQ-MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
             EA + LD+ M   GC P + TY  L++G C   +++ A  +   +    ++P + +Y+
Sbjct: 218 FLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYS 277

Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
            ++DG  K GR  +A  ++ E    G   NVV + TL +G CK G       L ++MK+ 
Sbjct: 278 VIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRS 337

Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
              P++ +Y+TL++   +  +   A+ +F + +R    +D  M  +++ GLC      + 
Sbjct: 338 GAFPNQRTYATLIDTFCRNDRTETALGLF-DHIRDYCPLDVAMYTAVVSGLC-----RER 391

Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH-AIEMGHIPRTITF 408
            L+DA  +F +M       D   Y +++    + ++ +EA   L     + G +   +T+
Sbjct: 392 RLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTY 451

Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKSYDAC 460
           N VI   C    ++  ++L + M +    P   +Y  LI +L    ++ +++D C
Sbjct: 452 NTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLC 502



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 153/341 (44%), Gaps = 16/341 (4%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSY-GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           +N ++  L   N    A KF  E     G +P   T++ +IR  C       A ++ + M
Sbjct: 205 YNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAM 264

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            +    P + +++++++ L K+GR+ +A  V+ +M  +GC+ N+  Y  L+ GLC  G +
Sbjct: 265 LERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFL 324

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP-NVVTFNT 265
           ++AY +   +K  G  P+  TY  ++D FC+  R+  A+ L +    R   P +V  +  
Sbjct: 325 DDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI--RDYCPLDVAMYTA 382

Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV-RF 324
           + +G C+E        L + M+      D  +Y+ LL+G  +  +   A  I +E+    
Sbjct: 383 VVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDP 442

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI-RTLGKG 383
           G   +    N+++ G C         LE    +F +M ++    D  TY  +I R LG G
Sbjct: 443 GCVANLLTYNTVIAGCC---------LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSG 493

Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
            +   A       +  G  P +     V+  LC   + D A
Sbjct: 494 -EIGRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLA 533



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 44/305 (14%)

Query: 80  GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
           G + +V  +  L+       + + AV+ ++      + P   ++S++I         ++A
Sbjct: 233 GCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDA 292

Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
            +V+  M   G   NV  +T L++ LCKSG L +A  +   M R G  PN +TY  L+  
Sbjct: 293 YRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDT 352

Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT-- 257
            C   R E A  +  +++ D    DV  YTAV+ G C+  R ++A  L  E    GV+  
Sbjct: 353 FCRNDRTETALGLFDHIR-DYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSAD 411

Query: 258 ----------------------------------PNVVTFNTLFNGYCKEGTPMKGVGLL 283
                                              N++T+NT+  G C E     G+ L 
Sbjct: 412 THAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCCLE----SGMVLF 467

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             M++R   PD  +YS L++ LL  G+I  A  + +EM+  G      ++  ++  LC  
Sbjct: 468 YEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGRVVARLC-- 525

Query: 344 SWEEK 348
            W  +
Sbjct: 526 -WSRR 529



 Score = 42.4 bits (98), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 35/184 (19%), Positives = 81/184 (44%), Gaps = 6/184 (3%)

Query: 70  IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
           + +FD I+ D     V+ +  ++  L      + A   F E    G++ ++  +++++  
Sbjct: 363 LGLFDHIR-DYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHG 421

Query: 130 YCNKNDFFEARKVIDCMFDN-GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
                   EA ++++ + D+ G   N+ T+  ++   C    L+  + +  +M + G  P
Sbjct: 422 AFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAP 477

Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
           +  TY+ L+  L   G +  A+++   +   GL P       V+   C   R + A +++
Sbjct: 478 DFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKVI 537

Query: 249 NEAI 252
             A+
Sbjct: 538 EMAM 541


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 184/403 (45%), Gaps = 5/403 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           +FD + ++G    V + N +L  L   N    A   +     +G+ P   T++ M+  YC
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
            +    +A +++  M + G +PN  T+ +LVN L K G L++A  ++++M   G   +  
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           TYN L+ G C  G   EA++++  + N    P + TY  +M G CK  +        ++ 
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
           ++   TP++V+FN+L  GYC+ G   +   L   +K R+ +P  I+Y+TL++GL  WG +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
             A+ + KEM   G   D      L+ G C K       +  A   F +M  K    D  
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNG-CFK----LGYVSMARGFFNEMLSKGLKPDRF 461

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
            Y   I    K   T  A       +  G  P  IT+N  + ALC +G  ++A  LL  M
Sbjct: 462 AYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENM 521

Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
                IP   +Y  +I    +      A  ++   L +GV P 
Sbjct: 522 VSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPS 564



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 189/403 (46%), Gaps = 6/403 (1%)

Query: 71  DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
           +++  +++ G   +V  +N +L +       + A++  SE    G  PN  T+++++   
Sbjct: 201 NVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGL 260

Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
             K +  +A+ +I+ M ++G + +  T+  L+N  C+ G   EA +++++M      P +
Sbjct: 261 SKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTL 320

Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
            TYN L+ GLC   +V        ++      PD+ ++ +++ G+C+ G  +EA  L +E
Sbjct: 321 STYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDE 380

Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
              R + P V+T+NTL +G C  G     + L K M  +   PD  +Y+ L+NG  K G 
Sbjct: 381 LKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGY 440

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           +  A   F EM+  G + D    N+ + G  MK  +       A+ + E+M       D 
Sbjct: 441 VSMARGFFNEMLSKGLKPDRFAYNTRIVGE-MKIADTS----VAFSMQEEMLAAGFPPDV 495

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
            TY + +  L +    +EA   L + +  G IP  +T+ ++I      G + KA  +   
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555

Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           M      PS  +Y +LI      ++  D   +Y + + +  +P
Sbjct: 556 MLSKGVAPSVVTYTVLIHA-HAAKQMLDLAFMYFSKMLEKSVP 597



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 194/442 (43%), Gaps = 30/442 (6%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   + + +++   +++ G   +   +N L+  L    E E A     E  + GL  +++
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T++ +I  +C K  F EA  +++ M +    P ++T+  L+  LCK  ++         M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
            +    P+I ++N LL G C  G + EA+ +   +K   L P V TY  ++ G C  G  
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
           + A+ L  E  ++G+ P++ T+  L NG  K G      G    M  +   PD+ +Y+T 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEK-DLLED------ 353
           + G +K      A S+ +EM+  GF  D    N  +  LC + ++EE  DLLE+      
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 354 ----------------------AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
                                 A +VF +M  K       TY ++I      +  D A +
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
           +    +E       IT+N +I  LC   ++D+A      M E   +P++ SY +LI +  
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESC 646

Query: 452 QLEKSYDACALYGAALKQGVIP 473
            +    +A  LY   L + + P
Sbjct: 647 NMGYWEEALRLYREMLDRKIQP 668



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 174/386 (45%), Gaps = 7/386 (1%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF-FSEASSYGLAPNSWTFSIM 126
           E  D+ + +       ++S +N L+  L     Q T V+  FS+       P+  +F+ +
Sbjct: 303 EAFDLVEEMVNRRAFPTLSTYNTLMYGLCKW-VQVTGVRLRFSDMLKSKFTPDIVSFNSL 361

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  YC      EA  + D +      P V T+  L++ LC  G L  AL +  +M   G 
Sbjct: 362 LYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGL 421

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P+I TY  L+ G   +G V  A      + + GLKPD + Y   + G  K+  ++ A  
Sbjct: 422 FPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFS 481

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           +  E +  G  P+V+T+N   +  C++G   +   LL+ M     +PD ++Y++++NG +
Sbjct: 482 MQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFV 541

Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
           K G +R A  +F EM+  G          L+      +   K +L+ A+  F KM +K  
Sbjct: 542 KNGHLRKAREVFNEMLSKGVAPSVVTYTVLIH-----AHAAKQMLDLAFMYFSKMLEKSV 596

Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
             +  TY  +I  L   ++ DEA  +     E G +P   ++  +I   C  G  ++AL 
Sbjct: 597 PANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALR 656

Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQ 452
           L   M +    P   ++ + +  L +
Sbjct: 657 LYREMLDRKIQPDSFTHSVFLKNLHR 682



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 138/301 (45%), Gaps = 5/301 (1%)

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
           L V D+M R G  P+++  N +L+ L     + +A  +   ++  G+KP V TY  ++D 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
           +CK GR ++A+ELL+E  ERG  PN VT+N L NG  K+G   +  GL++ M        
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
             +Y+ L+NG  + G    A  + +EMV           N+L+ GLC   W +   +   
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLC--KWVQ---VTGV 339

Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
              F  M K     D  ++  ++    +     EA +          +P  IT+N +I  
Sbjct: 340 RLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHG 399

Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
           LC  G +D AL L   M +    P   +Y +L+    +L     A   +   L +G+ P 
Sbjct: 400 LCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPD 459

Query: 475 R 475
           R
Sbjct: 460 R 460



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 96/207 (46%)

Query: 56  RFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
           R V  +K +       + + +   G    V  +N  + AL      E A        S G
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525

Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
           L P+  T++ +I  +       +AR+V + M   G  P+V T+T+L+++      L  A 
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAF 585

Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
               +M       N+ TYN ++ GLC   R++EAY+    ++  G+ P+ ++YT +++  
Sbjct: 586 MYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINES 645

Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVT 262
           C +G   EA+ L  E ++R + P+  T
Sbjct: 646 CNMGYWEEALRLYREMLDRKIQPDSFT 672



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 78/167 (46%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
            +E  D+ +++  DG       +  ++   V       A + F+E  S G+AP+  T+++
Sbjct: 511 FEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTV 570

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I  +  K     A      M +     NV T+  ++N LC + R+ EA +  D+M   G
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
             PN  +Y  L+   C +G  EEA  +   + +  ++PD +T++  +
Sbjct: 631 ILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%)

Query: 61  IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
           +K   L++  ++F+ +   G   SV  +  L+ A       + A  +FS+     +  N 
Sbjct: 541 VKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANV 600

Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
            T++ +I   C      EA K  D M + G  PN  ++TIL+N  C  G  +EAL +  +
Sbjct: 601 ITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYRE 660

Query: 181 MGRIGCKPNIQTYNCLLKGL 200
           M     +P+  T++  LK L
Sbjct: 661 MLDRKIQPDSFTHSVFLKNL 680


>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
          Length = 414

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 180/351 (51%), Gaps = 10/351 (2%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG-YHPNVTTFTI 160
           + A    ++ S +G     + ++ ++          +A  + +    +G Y P+V +F +
Sbjct: 28  DAAANLLTKGSWFGCRIEWYAYNNLLNTLIAHGRAQDAVALFESWIQDGLYSPDVWSFNV 87

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
           ++  +C+ G L++ALE++++M   GC P+  T N L+ GLC V +V + +E+L  ++ DG
Sbjct: 88  VIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDG 147

Query: 221 L-KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
           +  P+V TYT+V+ G+CK GR  +A  + N+ ++ G  PN VT+N L NGY K       
Sbjct: 148 VCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESA 207

Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
           V +   +   +C PD +++++L++G  + G++  A+ I+ EM +   + +    + ++  
Sbjct: 208 VRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHS 267

Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAI 397
           LC ++        +A  +  ++  +  +  P T  Y  +I  L KG K DEA + +    
Sbjct: 268 LCTQNRSA-----EALSLLRELNMRADIV-PQTFIYNPIIDILCKGGKVDEANLIVTDME 321

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           E G  P   T+  +I   C +G+I +A+ L   M E    P   + +  I+
Sbjct: 322 EKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFIS 372



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 161/316 (50%), Gaps = 8/316 (2%)

Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGC-KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
           L+N+L   GR ++A+ + +   + G   P++ ++N ++KG+C VG +++A E++  +   
Sbjct: 52  LLNTLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEF 111

Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT-PNVVTFNTLFNGYCKEGTPMK 278
           G  PD  T   ++DG C+V + N+  E+L      GV  PNVVT+ ++ +GYCK G    
Sbjct: 112 GCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKD 171

Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
              +   M +    P+ ++Y+ L+NG  K   +  AV ++ +++      D    NSL+ 
Sbjct: 172 AFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLID 231

Query: 339 GLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA-I 397
           G C         L+DA +++ +M +     +  T+ I+I +L    ++ EAL  L    +
Sbjct: 232 GYC-----RCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNM 286

Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
               +P+T  +N +I  LC  GK+D+A L++  M E    P + +Y +LI       +  
Sbjct: 287 RADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIP 346

Query: 458 DACALYGAALKQGVIP 473
           +A  L+   ++ G  P
Sbjct: 347 EAVTLFHKMVETGCRP 362



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 165/338 (48%), Gaps = 10/338 (2%)

Query: 67  KERIDIFDSIKKDGT-NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           ++ + +F+S  +DG  +  V  FN ++  +  +   + A++     + +G +P++ T +I
Sbjct: 63  QDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNI 122

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGY-HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
           ++   C      +  +V+  +  +G   PNV T+T +++  CK+GR+K+A  V + M + 
Sbjct: 123 LVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQS 182

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           G +PN  TYN L+ G      +E A  M   +      PDV T+ +++DG+C+ G+ ++A
Sbjct: 183 GTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDA 242

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLN 303
           M +  E  +  + PNV TF+ + +  C +    + + LL+ +  R + +P    Y+ +++
Sbjct: 243 MRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYNPIID 302

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
            L K GK+  A  I  +M   G   D+     L+ G CMK       + +A  +F KM +
Sbjct: 303 ILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKG-----RIPEAVTLFHKMVE 357

Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
                D  T    I  + K    +E  +H    I  GH
Sbjct: 358 TGCRPDNITINSFISCVLKAGMPNE--VHQIMLIASGH 393



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 1/216 (0%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           KA  +K+   +++ + + GT  +   +N L+       + E+AV+ + +   +   P+  
Sbjct: 165 KAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVV 224

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  YC      +A ++   M  +   PNV TF+I+++SLC   R  EAL +L ++
Sbjct: 225 TFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLREL 284

Query: 182 G-RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
             R    P    YN ++  LC  G+V+EA  ++ +++  G  PD YTYT ++ G C  GR
Sbjct: 285 NMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGR 344

Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
             EA+ L ++ +E G  P+ +T N+  +   K G P
Sbjct: 345 IPEAVTLFHKMVETGCRPDNITINSFISCVLKAGMP 380


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 197/412 (47%), Gaps = 6/412 (1%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   L     +   + K+G   + + ++ L+  L    +  +A++   E +  G+A N++
Sbjct: 420 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNY 479

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           TF+ +I  +C      EA ++ D M D+   PN  TF +++   C  G +++A ++ DQM
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
             +G KP+  TY  L+ GLC    V +A E + +++N     + ++ TA++ G  + GR 
Sbjct: 540 VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRF 599

Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
            E   L +E   RGV  ++V+F  +     K+    K   L + MK++   PD I Y+ +
Sbjct: 600 TETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCM 659

Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
           ++ L K   +  A++ + +MV  G+  +      L+  LC   +     L  A  + ++M
Sbjct: 660 IDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGY-----LGSAELLCKEM 714

Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
                + +  TY   +         ++A   LH A+  GH+   ++FN +I+ LC  GKI
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEKAK-DLHSAMLQGHLASIVSFNILIKGLCKAGKI 773

Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
            +A+ L+  + E    P   SY  +I +L ++     A  L+   L +G+ P
Sbjct: 774 QEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKP 825



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 171/379 (45%), Gaps = 30/379 (7%)

Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
           E A     +    G+ PN + ++ +I   C    F +A ++   M   G  PN  T+ IL
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
           +++LCK G +++AL + D+M   G K  +  YN L+ G C  G ++ A  +L  +  +GL
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
            P   +Y+ ++ G C+ G  + AMEL  E  ERG+  N  TF  L NG+CK+    +   
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           L   M   N +P++++++ ++ G    G IR A  ++ +MV  G + D     SL+ GLC
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559

Query: 342 MKSWEEK------DL------------------------LEDAYQVFEKMTKKVSVTDPG 371
           + S   K      DL                          + Y ++++M  +    D  
Sbjct: 560 LTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLV 619

Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
           ++ I++    K    +++ +      E G  P  I +  +I AL  E  + +AL     M
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 679

Query: 432 YEHAKIPSRTSYDMLITKL 450
                 P+  ++ +LI  L
Sbjct: 680 VIDGYSPNTVTHTVLINNL 698



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 165/349 (47%), Gaps = 5/349 (1%)

Query: 76  IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
           ++ +G   S   +N L+  L      + AV+  +   + G+  +  T+  ++  +C   +
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
              A ++   M   G+ P+    + +++ L K   ++EA  +  ++G +G  PN+  YN 
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
           L+  LC   R ++A  +   +   GL+P+  TY  ++   CK G   +A+ L ++  ++G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
           +   V  +N+L NGYCK+G+  +  GLL  M K    P   SYS L+ GL + G +  A+
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAM 463

Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
            + +EM   G   +     +L+ G C     +   +++A ++F+KM     + +  T+ +
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFC-----KDKKMDEAARLFDKMIDSNVIPNEVTFNV 518

Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
           +I          +A       +EMG  P   T+ ++I  LC    + KA
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 169/397 (42%), Gaps = 40/397 (10%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           + +L +LV + +   A   F +    G+  + + ++  IR YC   +   AR ++  M  
Sbjct: 167 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR--- 205
            G   +   + +L+  LCK+ R++EA+EV + M  IG   +  TY  L+ G C +     
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286

Query: 206 --------------------------------VEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
                                           VEEA+ +   + + G+ P+V+ Y A++D
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346

Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
             CK  R ++A  L  E   RG+ PN VT+  L +  CK G     + L   M+ +    
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 406

Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
               Y++L+NG  K G +  A  +   MV+ G        + L+ GLC         L  
Sbjct: 407 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC-----RNGDLSS 461

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A ++  +M ++    +  T+  +I    K KK DEA       I+   IP  +TFN +I+
Sbjct: 462 AMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
             C  G I KA  L   M E    P   +Y  LI+ L
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 186/419 (44%), Gaps = 38/419 (9%)

Query: 84  SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
           +V  +N L+  L      + A + F E +  GL PN  T++I+I   C +    +A  + 
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396

Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
           D M D G    V  +  L+N  CK G L  A  +L  M + G  P   +Y+ L+ GLC  
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456

Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
           G +  A E+   +   G+  + YT+TA+++GFCK  + +EA  L ++ I+  V PN VTF
Sbjct: 457 GDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516

Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
           N +  GYC  G   K   L   M +    PD  +Y +L++GL     +  A     ++  
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576

Query: 324 FGFEVDERMMNSLLRGLCMKS--------WEEK-------DLL---------------ED 353
               ++   + +LL GL  +         W+E        DL+               E 
Sbjct: 577 SYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           +  +F +M ++    D   Y  +I  L K +   +AL      +  G+ P T+T   +I 
Sbjct: 637 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLIN 696

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSY----DMLITKLDQLEKSYDACALYGAALK 468
            LC  G +  A LL   M     +P++ +Y    D   T+ D +EK+ D   L+ A L+
Sbjct: 697 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGD-MEKAKD---LHSAMLQ 751



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 132/275 (48%), Gaps = 1/275 (0%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
           E   ++D +   G    +  F  ++ A +  +++E +   F E    G+ P+   ++ MI
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660

Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
                + +  +A    D M  +GY PN  T T+L+N+LCKSG L  A  +  +M      
Sbjct: 661 DALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720

Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
           PN  TYNC L      G +E+A + L +    G    + ++  ++ G CK G+  EA++L
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDL 779

Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
           + +  E G +P+ ++++T+ +  CK G   K   L   M  +   PD ++Y+  +     
Sbjct: 780 MRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 839

Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
            G+   A+ I+  M+R G + +     +LL G+ +
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 166/396 (41%), Gaps = 40/396 (10%)

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
           S G+  N +T S ++        F  AR + D M  +G H +   +T  + + C+S  L 
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
            A  ++ +M   G K +   YN L+ GLC   RV+EA E+   + N G+  D  TY  ++
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275

Query: 233 DGFCKVGRSNEAM----------------------------ELLNEAI-------ERGVT 257
            GFC++     A+                            EL+ EA        + G+ 
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335

Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
           PNV  +N L +  CK         L K M  R   P++++Y+ L++ L K G I  A+ +
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
           F +M   G +V     NSL+ G C     ++  L+ A  +   M K+       +Y  +I
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYC-----KQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450

Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
             L +      A+       E G      TF  +I   C + K+D+A  L   M +   I
Sbjct: 451 AGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 510

Query: 438 PSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
           P+  +++++I     +     A  LY   ++ G+ P
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKP 546



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/419 (21%), Positives = 163/419 (38%), Gaps = 74/419 (17%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   +++   + + G  W+   F  L+       + + A + F +     + PN  TF++
Sbjct: 459 LSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 518

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC------------------- 166
           MI  YC   +  +A ++ D M + G  P+  T+  L++ LC                   
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 578

Query: 167 ----------------KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
                           + GR  E   + D+M   G K ++ ++  ++         E++ 
Sbjct: 579 AVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 638

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
            +   +K  G+KPD   YT ++D   K     +A+   ++ +  G +PN VT   L N  
Sbjct: 639 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNL 698

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDK----------------------------------I 296
           CK G       L K M   N LP+K                                  +
Sbjct: 699 CKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIV 758

Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
           S++ L+ GL K GKI+ A+ + +++   GF  D    ++++  LC     +   +  A++
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELC-----KMGDINKAFE 813

Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
           ++ +M  K    D   Y I IR      ++D+AL    + I  G  P   T+  ++  +
Sbjct: 814 LWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 5/309 (1%)

Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
           V+     +G   N  T + ++ SL K  +   A ++ D+M + G   +   Y   ++  C
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
               ++ A  +++ ++++G+K     Y  +M G CK  R  EA+E+ N  +  GVT + V
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
           T+ TL  G+C+       + +   M +   +P + + S +++ L K   +  A S+  ++
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329

Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
              G   +    N+L+  LC     + +  +DA ++F++M  +    +  TY I+I  L 
Sbjct: 330 GDLGMVPNVFAYNALIDKLC-----KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384

Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
           K    ++AL       + G       +N++I   C +G +D+A  LL  M +    P+  
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAA 444

Query: 442 SYDMLITKL 450
           SY  LI  L
Sbjct: 445 SYSPLIAGL 453



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 67/169 (39%)

Query: 32  FAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDL 91
             +A L   E L     P       F+D        E+     S    G   S+  FN L
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNIL 763

Query: 92  LMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGY 151
           +  L    + + A+    + +  G +P+  ++S +I   C   D  +A ++ + M   G 
Sbjct: 764 IKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823

Query: 152 HPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGL 200
            P+V  + I +      G   +AL +   M R G +PN  TY  LL G+
Sbjct: 824 KPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872


>gi|242034189|ref|XP_002464489.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
 gi|241918343|gb|EER91487.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
          Length = 585

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 189/386 (48%), Gaps = 5/386 (1%)

Query: 89  NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
           N L+  L    +  +A+K   +    G +P+  TF+ +IRC C+ + +  A         
Sbjct: 197 NMLIARLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHMYDRAISFWKEQLK 256

Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
            G+ P   T T+LV+ +CK      ALEVLD++G  GC+P++ +YN L+   C  G ++ 
Sbjct: 257 LGWPPYEMTSTLLVDLICKKCGPMRALEVLDELGLEGCQPDVVSYNTLISVSCKAGCLKN 316

Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
           A  +L ++  +GL+P+  TY  ++   C   R +E  +LL    +    P+V  +N   N
Sbjct: 317 AKLILTHLSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANHKPDVTAYNIFIN 376

Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
            +C+ G   + + +L++M    C PD ++Y+TLLN + K G +  A+ IF  +   G +V
Sbjct: 377 YFCRYGYLDQAIDVLEVMVNEKCFPDIVTYNTLLNAISKRGMVEEALGIFHSIRENGCQV 436

Query: 329 DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
                N+L+  L      +K  + +A  +F++MT      D  TYG ++    K     E
Sbjct: 437 VRITYNTLIDAL-----AKKGEVINAMTLFDEMTVDGISPDDVTYGSLVMGFCKKNMAKE 491

Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
           AL  L+  + +G   +  TF+ +IQ+LC     + A  +L +M           Y  ++T
Sbjct: 492 ALELLNQMLALGFEVKATTFSMMIQSLCKGCNTEAAAEILRVMVSRNVNHRSAFYLSIVT 551

Query: 449 KLDQLEKSYDACALYGAALKQGVIPQ 474
           ++ +  +  +A  L+   ++  V+ +
Sbjct: 552 RVAKSGRVKEAQILHQELVQSKVLKE 577



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 181/362 (50%), Gaps = 5/362 (1%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L   + + + ++  G + S   FN L+  +   +  + A+ F+ E    G  P   T ++
Sbjct: 209 LSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHMYDRAISFWKEQLKLGWPPYEMTSTL 268

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           ++   C K     A +V+D +   G  P+V ++  L++  CK+G LK A  +L  +   G
Sbjct: 269 LVDLICKKCGPMRALEVLDELGLEGCQPDVVSYNTLISVSCKAGCLKNAKLILTHLSAEG 328

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +PN  TY  LL  LC   R  E  ++L ++K    KPDV  Y   ++ FC+ G  ++A+
Sbjct: 329 LEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANHKPDVTAYNIFINYFCRYGYLDQAI 388

Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
           ++L   +     P++VT+NTL N   K G   + +G+   +++  C   +I+Y+TL++ L
Sbjct: 389 DVLEVMVNEKCFPDIVTYNTLLNAISKRGMVEEALGIFHSIRENGCQVVRITYNTLIDAL 448

Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
            K G++  A+++F EM   G   D+    SL+ G C     +K++ ++A ++  +M    
Sbjct: 449 AKKGEVINAMTLFDEMTVDGISPDDVTYGSLVMGFC-----KKNMAKEALELLNQMLALG 503

Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
                 T+ ++I++L KG  T+ A   L   +      R+  + +++  +   G++ +A 
Sbjct: 504 FEVKATTFSMMIQSLCKGCNTEAAAEILRVMVSRNVNHRSAFYLSIVTRVAKSGRVKEAQ 563

Query: 426 LL 427
           +L
Sbjct: 564 IL 565



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 185/423 (43%), Gaps = 21/423 (4%)

Query: 65  PLKERIDIF-DSIKKDGTNWSVSDFNDLLMAL-----VMLNEQETAVKFFSEAS------ 112
           P +   D+F D+    G+  + +DF  ++ +L      +LNEQ    +     S      
Sbjct: 56  PDRRLRDVFVDASADHGSGRATADFKKVVPSLDANPRRLLNEQLKPRRPLDHNSDKATNG 115

Query: 113 SYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
           +Y     +  ++  +R +CN     +A +VID M  +G  P+      L+  L ++G+  
Sbjct: 116 AYFSKHKAECYADSLRRHCNNGKLIQACRVIDEMVLHGQVPDSKCCVRLIRGLVRTGKTN 175

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
           +A  VL+ M   G  P+  T N L+  LC  G++  A ++L +++  G  P   T+  ++
Sbjct: 176 KARHVLEVMVLSGGVPDTITCNMLIARLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLI 235

Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
              C     + A+    E ++ G  P  +T   L +  CK+  PM+ + +L  +    C 
Sbjct: 236 RCMCSHHMYDRAISFWKEQLKLGWPPYEMTSTLLVDLICKKCGPMRALEVLDELGLEGCQ 295

Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEE-KDL 350
           PD +SY+TL++   K G ++ A  I   +   G E +      LL  LC K  W E  DL
Sbjct: 296 PDVVSYNTLISVSCKAGCLKNAKLILTHLSAEGLEPNGTTYCILLHSLCDKRRWSEVGDL 355

Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
           L    Q   K        D   Y I I    +    D+A+  L   +     P  +T+N 
Sbjct: 356 LAHMKQANHK-------PDVTAYNIFINYFCRYGYLDQAIDVLEVMVNEKCFPDIVTYNT 408

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
           ++ A+   G +++AL +   + E+     R +Y+ LI  L +  +  +A  L+      G
Sbjct: 409 LLNAISKRGMVEEALGIFHSIRENGCQVVRITYNTLIDALAKKGEVINAMTLFDEMTVDG 468

Query: 471 VIP 473
           + P
Sbjct: 469 ISP 471



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 145/344 (42%), Gaps = 5/344 (1%)

Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
           A +   E   +G  P+S     +IR         +AR V++ M  +G  P+  T  +L+ 
Sbjct: 142 ACRVIDEMVLHGQVPDSKCCVRLIRGLVRTGKTNKARHVLEVMVLSGGVPDTITCNMLIA 201

Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
            LC  G+L  A++VL+ M   GC P+  T+N L++ +C     + A          G  P
Sbjct: 202 RLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHMYDRAISFWKEQLKLGWPP 261

Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
              T T ++D  CK      A+E+L+E    G  P+VV++NTL +  CK G       +L
Sbjct: 262 YEMTSTLLVDLICKKCGPMRALEVLDELGLEGCQPDVVSYNTLISVSCKAGCLKNAKLIL 321

Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
             +      P+  +Y  LL+ L    +      +   M +   + D    N  +   C  
Sbjct: 322 THLSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANHKPDVTAYNIFINYFCRY 381

Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
            +     L+ A  V E M  +    D  TY  ++  + K    +EAL   H   E G   
Sbjct: 382 GY-----LDQAIDVLEVMVNEKCFPDIVTYNTLLNAISKRGMVEEALGIFHSIRENGCQV 436

Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
             IT+N +I AL  +G++  A+ L   M      P   +Y  L+
Sbjct: 437 VRITYNTLIDALAKKGEVINAMTLFDEMTVDGISPDDVTYGSLV 480



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 74/148 (50%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K   ++E + IF SI+++G       +N L+ AL    E   A+  F E +  G++P+  
Sbjct: 415 KRGMVEEALGIFHSIRENGCQVVRITYNTLIDALAKKGEVINAMTLFDEMTVDGISPDDV 474

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
           T+  ++  +C KN   EA ++++ M   G+    TTF++++ SLCK    + A E+L  M
Sbjct: 475 TYGSLVMGFCKKNMAKEALELLNQMLALGFEVKATTFSMMIQSLCKGCNTEAAAEILRVM 534

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
                      Y  ++  +   GRV+EA
Sbjct: 535 VSRNVNHRSAFYLSIVTRVAKSGRVKEA 562



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 85/198 (42%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L + ID+ + +  +     +  +N LL A+      E A+  F      G      T++ 
Sbjct: 384 LDQAIDVLEVMVNEKCFPDIVTYNTLLNAISKRGMVEEALGIFHSIRENGCQVVRITYNT 443

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I     K +   A  + D M  +G  P+  T+  LV   CK    KEALE+L+QM  +G
Sbjct: 444 LIDALAKKGEVINAMTLFDEMTVDGISPDDVTYGSLVMGFCKKNMAKEALELLNQMLALG 503

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
            +    T++ +++ LC     E A E+L  + +  +      Y +++    K GR  EA 
Sbjct: 504 FEVKATTFSMMIQSLCKGCNTEAAAEILRVMVSRNVNHRSAFYLSIVTRVAKSGRVKEAQ 563

Query: 246 ELLNEAIERGVTPNVVTF 263
            L  E ++  V      F
Sbjct: 564 ILHQELVQSKVLKEASQF 581


>gi|255561341|ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539072|gb|EEF40668.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 458

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 157/298 (52%), Gaps = 10/298 (3%)

Query: 94  ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM---FDNG 150
           AL    +++ AVK   E S     P+S+T++ +++C C           ID M   FD  
Sbjct: 163 ALCSAGKEDDAVKLVKELSLKHSKPDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSFD-- 220

Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
             PN+ T+TIL++++C S  L+EA+ +L  +   G KP+   YN ++KG C + +  +A 
Sbjct: 221 LEPNLVTYTILIDNVCNSKNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAI 280

Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
           ++   +K +G++PD+ TY  ++ G  K GR +EA   L   +E G  P+ VT+ +L NG 
Sbjct: 281 QVFKKMKEEGIEPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGL 340

Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
           C++G  +  + LL+ M+ + C P+  +Y+TLL GL K   +   + ++  +   G  +D 
Sbjct: 341 CRKGDALGALALLEDMEMKGCSPNSCTYNTLLYGLCKERLLEKGIELYNVIKEGGMLLDT 400

Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
               + +R LC +       + +AY+VF+   +  S+T+   Y  +  TL   KK  E
Sbjct: 401 ASYATFVRALCREGK-----VAEAYEVFDYAVESKSLTNAAAYTTLESTLKWLKKARE 453



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 166/346 (47%), Gaps = 10/346 (2%)

Query: 115 GLAPNSWTFSIMIRCYCNKND--FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
              P   T+ I++   C   D       ++++ M +NG+ P   T  I V +LC +G+  
Sbjct: 112 SFTPTISTYHILLSQSCKAPDPTLSPVHQILNLMVNNGFMPTQVTVDIAVRALCSAGKED 171

Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAV 231
           +A++++ ++     KP+  TYN L+K LC    +   Y  +  +++   L+P++ TYT +
Sbjct: 172 DAVKLVKELSLKHSKPDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSFDLEPNLVTYTIL 231

Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
           +D  C      EAM LL    E G  P+   +NT+  GYC        + + K MK+   
Sbjct: 232 IDNVCNSKNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEEGI 291

Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
            PD I+Y+TL+ GL K G++  A    K MV  G   D     SL+ GLC K     D L
Sbjct: 292 EPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKG----DAL 347

Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI-EMGHIPRTITFNN 410
             A  + E M  K    +  TY  ++  L K +  ++  I L++ I E G +  T ++  
Sbjct: 348 -GALALLEDMEMKGCSPNSCTYNTLLYGLCKERLLEKG-IELYNVIKEGGMLLDTASYAT 405

Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
            ++ALC EGK+ +A  +     E   + +  +Y  L + L  L+K+
Sbjct: 406 FVRALCREGKVAEAYEVFDYAVESKSLTNAAAYTTLESTLKWLKKA 451



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 122/236 (51%), Gaps = 1/236 (0%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
           +N L+  L           F  E  SS+ L PN  T++I+I   CN  +  EA +++  +
Sbjct: 192 YNFLVKCLCKCRALSNVYSFIDEMRSSFDLEPNLVTYTILIDNVCNSKNLREAMRLLGIL 251

Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
            + G+ P+   +  ++   C   +  +A++V  +M   G +P++ TYN L+ GL   GRV
Sbjct: 252 RECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEEGIEPDLITYNTLIFGLSKGGRV 311

Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
            EA   L  +   G  PD  TYT++M+G C+ G +  A+ LL +   +G +PN  T+NTL
Sbjct: 312 SEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGDALGALALLEDMEMKGCSPNSCTYNTL 371

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
             G CKE    KG+ L  ++K+   L D  SY+T +  L + GK+  A  +F   V
Sbjct: 372 LYGLCKERLLEKGIELYNVIKEGGMLLDTASYATFVRALCREGKVAEAYEVFDYAV 427



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 100/201 (49%)

Query: 66  LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
           L+E + +   +++ G       +N ++    ML++   A++ F +    G+ P+  T++ 
Sbjct: 241 LREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEEGIEPDLITYNT 300

Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
           +I          EA++ +  M ++G+ P+  T+T L+N LC+ G    AL +L+ M   G
Sbjct: 301 LIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGDALGALALLEDMEMKG 360

Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
           C PN  TYN LL GLC    +E+  E+   +K  G+  D  +Y   +   C+ G+  EA 
Sbjct: 361 CSPNSCTYNTLLYGLCKERLLEKGIELYNVIKEGGMLLDTASYATFVRALCREGKVAEAY 420

Query: 246 ELLNEAIERGVTPNVVTFNTL 266
           E+ + A+E     N   + TL
Sbjct: 421 EVFDYAVESKSLTNAAAYTTL 441



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 144/323 (44%), Gaps = 8/323 (2%)

Query: 150 GYHPNVTTFTILVNSLCKSG--RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
            + P ++T+ IL++  CK+    L    ++L+ M   G  P   T +  ++ LC  G+ +
Sbjct: 112 SFTPTISTYHILLSQSCKAPDPTLSPVHQILNLMVNNGFMPTQVTVDIAVRALCSAGKED 171

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-GVTPNVVTFNTL 266
           +A +++  +     KPD +TY  ++   CK    +     ++E      + PN+VT+  L
Sbjct: 172 DAVKLVKELSLKHSKPDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSFDLEPNLVTYTIL 231

Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
            +  C      + + LL ++++    PD   Y+T++ G     K   A+ +FK+M   G 
Sbjct: 232 IDNVCNSKNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEEGI 291

Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
           E D    N+L+ GL      +   + +A +  + M +     D  TY  ++  L +    
Sbjct: 292 EPDLITYNTLIFGL-----SKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGDA 346

Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
             AL  L      G  P + T+N ++  LC E  ++K + L  ++ E   +    SY   
Sbjct: 347 LGALALLEDMEMKGCSPNSCTYNTLLYGLCKERLLEKGIELYNVIKEGGMLLDTASYATF 406

Query: 447 ITKLDQLEKSYDACALYGAALKQ 469
           +  L +  K  +A  ++  A++ 
Sbjct: 407 VRALCREGKVAEAYEVFDYAVES 429


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 205/409 (50%), Gaps = 20/409 (4%)

Query: 62  KASPLKER-IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY------ 114
           K S L +R + +F  IK+ G   +V  +N LL AL+     E+  KF    + Y      
Sbjct: 119 KNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALL----GESGNKFHMIGAVYENMRGE 174

Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
           G+ PN +T++++++  C       A K++  M   G  P+  ++T +V ++C+ GR++EA
Sbjct: 175 GMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEA 234

Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
            EV     R G +  +   N L+ GLC  GRV E + ++  +  +G+ P+V +Y++V+  
Sbjct: 235 REVAR---RFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISW 291

Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
              VG    A+ +L + I RG  PNV TF++L  GY   G   +GVGL ++M      P+
Sbjct: 292 LSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPN 351

Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF-EVDERMMNSLLRGLCMKSWEEKDLLED 353
            + Y+TLLNGL   G +  AV +   M +  F   +    ++L+ G  +K+ +    L+ 
Sbjct: 352 VVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGF-VKAGD----LQG 406

Query: 354 AYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ 413
           A +V+ KM       +   Y  ++  L K    D+A   + +    G  P  +TFN  I+
Sbjct: 407 ASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIK 466

Query: 414 ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
            LC  G++  A+ ++  M  +  +P   +Y+ L+  L  + +  +AC L
Sbjct: 467 GLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACEL 515



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 193/435 (44%), Gaps = 15/435 (3%)

Query: 23  IPQFNKLVVFAAASLSTAESLDLKENPRSLQAQRFVDRIKA--------SPLKERIDIFD 74
           +P         AA        + +E  R   A+  V    A          + E   + D
Sbjct: 212 VPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMD 271

Query: 75  SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
            +  +G + +V  ++ ++  L  + E E A+    +    G  PN  TFS +++ Y    
Sbjct: 272 EMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGG 331

Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR-IGCKPNIQTY 193
              E   +   M   G  PNV  +  L+N LC SG L EA++V  +M +   C+PN+ TY
Sbjct: 332 RVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTY 391

Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
           + L+ G    G ++ A E+   + N G++P+V  YT+++D  CK    ++A  L++    
Sbjct: 392 STLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMAT 451

Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
            G  P VVTFNT   G C  G  +  + ++  M++  CLPD  +Y+ LL+GL    +++ 
Sbjct: 452 DGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKE 511

Query: 314 AVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTY 373
           A  + +E+     E++    N+++ G      EE  L     QV  +M       D  T 
Sbjct: 512 ACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVL-----QVLGRMLVNGVKPDAITV 566

Query: 374 GIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALCGEGKIDKALLLLFLMY 432
            +VI    K  K   A+  L        + P  I   +++  +C    I++A++ L  M 
Sbjct: 567 NVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKML 626

Query: 433 EHAKIPSRTSYDMLI 447
                P+  ++D+L+
Sbjct: 627 NKGIFPNIATWDVLV 641



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 188/424 (44%), Gaps = 44/424 (10%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           ++++++ +G   +V  +N LL AL    + + A K   E S  G  P+  +++ ++   C
Sbjct: 167 VYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMC 226

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
                 EAR+V       G    V+    L+  LC+ GR+ E   ++D+M   G  PN+ 
Sbjct: 227 EDGRVEEAREVARRFGAEGV---VSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVV 283

Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
           +Y+ ++  L  VG VE A  +L  +   G +P+V+T++++M G+   GR  E + L    
Sbjct: 284 SYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVM 343

Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN-CLPDKISYSTLLNGLLKWGK 310
           +  GV PNVV +NTL NG C  G   + V +   M+K   C P+  +YSTL++G +K G 
Sbjct: 344 VLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGD 403

Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
           ++ A  ++ +MV  G   +  +  S++  LC  S     + + AY++ + M         
Sbjct: 404 LQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNS-----MFDQAYRLIDNMATDGCPPTV 458

Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT------------------------- 405
            T+   I+ L  G +   A+  +      G +P T                         
Sbjct: 459 VTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRE 518

Query: 406 ----------ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEK 455
                     +T+N V+      GK +  L +L  M  +   P   + +++I    +L K
Sbjct: 519 LEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGK 578

Query: 456 SYDA 459
              A
Sbjct: 579 VRTA 582



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 142/277 (51%), Gaps = 2/277 (0%)

Query: 66  LKERIDIFDSIKKDG-TNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFS 124
           L E +D+   ++KD     +V+ ++ L+   V   + + A + +++  + G+ PN   ++
Sbjct: 368 LAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYT 427

Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
            M+   C  + F +A ++ID M  +G  P V TF   +  LC  GR+  A+ V+DQM R 
Sbjct: 428 SMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRY 487

Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
           GC P+ +TYN LL GL  V  ++EA E++  ++   ++ ++ TY  VM GF   G+    
Sbjct: 488 GCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWV 547

Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL-KLMKKRNCLPDKISYSTLLN 303
           +++L   +  GV P+ +T N +   Y K G     +  L ++   +   PD I++++LL 
Sbjct: 548 LQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLW 607

Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
           G+     I  A+    +M+  G   +    + L+RG 
Sbjct: 608 GICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGF 644



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 145/314 (46%), Gaps = 9/314 (2%)

Query: 68  ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA-PNSWTFSIM 126
           E + ++  +  +G   +V  +N LL  L        AV             PN  T+S +
Sbjct: 335 EGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTL 394

Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
           +  +    D   A +V + M + G  PNV  +T +V+ LCK+    +A  ++D M   GC
Sbjct: 395 VHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGC 454

Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
            P + T+N  +KGLC  GRV  A  ++  ++  G  PD  TY  ++DG   V    EA E
Sbjct: 455 PPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACE 514

Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
           L+ E  ER V  N+VT+NT+  G+   G     + +L  M      PD I+ + ++    
Sbjct: 515 LIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYS 574

Query: 307 KWGKIRPAVSIFKEMVRFGFEV--DERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
           K GK+R A+  F + +  G E+  D     SLL G+C         +E+A     KM  K
Sbjct: 575 KLGKVRTAIQ-FLDRITAGKELCPDIIAHTSLLWGICNSLG-----IEEAIVYLNKMLNK 628

Query: 365 VSVTDPGTYGIVIR 378
               +  T+ +++R
Sbjct: 629 GIFPNIATWDVLVR 642



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 92/186 (49%), Gaps = 3/186 (1%)

Query: 72  IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
           + D +++ G       +N+LL  L  +NE + A +   E     +  N  T++ ++  + 
Sbjct: 480 VVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFS 539

Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM--GRIGCKPN 189
           +        +V+  M  NG  P+  T  +++ +  K G+++ A++ LD++  G+  C P+
Sbjct: 540 SHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELC-PD 598

Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
           I  +  LL G+C    +EEA   L  + N G+ P++ T+  ++ GF K       + +L+
Sbjct: 599 IIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHMGPIRILD 658

Query: 250 EAIERG 255
           + + +G
Sbjct: 659 DILGKG 664



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 3/143 (2%)

Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
           +L  MK       + S+  +LN     G    A+ +F  +  FG +   ++ N LL  L 
Sbjct: 95  ILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALL 154

Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
            +S  +  ++     V+E M  +    +  TY ++++ L K  K D A   L    + G 
Sbjct: 155 GESGNKFHMIG---AVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGC 211

Query: 402 IPRTITFNNVIQALCGEGKIDKA 424
           +P  +++  V+ A+C +G++++A
Sbjct: 212 VPDGVSYTTVVAAMCEDGRVEEA 234


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 163/326 (50%), Gaps = 9/326 (2%)

Query: 48  NPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
           +P  +     +D + K   +++ + +F  +K  G   ++  +  ++  L      + A  
Sbjct: 156 SPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFF 215

Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
            F E +S GL      ++ +I           A K+   M   G  P+  TFT LV  L 
Sbjct: 216 LFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLG 275

Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
            +GR  EA  +  +   +GC  ++  YN L+  LC   R++EA+E+   ++ DGL PDVY
Sbjct: 276 VAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVY 335

Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
           T+ A+MDG CK GR ++A  LL +    G TP+V  +NTL +G  K G   +   LL  M
Sbjct: 336 TFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEM 395

Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
           +     PD ++Y+TL++   K G+I  A+ +F+E+   GF  +    N++L GLCM    
Sbjct: 396 QSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGR- 453

Query: 347 EKDLLEDAYQVFEKMTKKV--SVTDP 370
               +++AY++F  M ++    V DP
Sbjct: 454 ----VDEAYKLFNGMKQETVDGVIDP 475



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 185/381 (48%), Gaps = 9/381 (2%)

Query: 52  LQAQRFVDRIK----ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
           LQ + F++  +    A  L++ ++    ++      + S +N L+ A V     + A+  
Sbjct: 52  LQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAV 111

Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
           +      GL P+++TF++++  +          K+ + M +    PNV T++IL++++CK
Sbjct: 112 YRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCK 171

Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
            G +++AL+V   M   GC+PNI TY  ++ GL   G V++A+ +   + ++GL      
Sbjct: 172 CGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVV 231

Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
           Y +++ G  + GR++ A +L  E + +G+ P+ VTF +L  G    G   +   + +  +
Sbjct: 232 YNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEAR 291

Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
              C  D   Y+ L++ L K  ++  A  IF E+   G   D    N+L+ GLC     +
Sbjct: 292 DVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLC-----K 346

Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
              + DA+ +   M +     D   Y  +I  L K  + +EA   L     +G+ P  +T
Sbjct: 347 SGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVT 406

Query: 408 FNNVIQALCGEGKIDKALLLL 428
           +N +I   C  G+I+ AL L 
Sbjct: 407 YNTLIDESCKGGRIEDALRLF 427



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 194/404 (48%), Gaps = 13/404 (3%)

Query: 32  FAAASL--STAESLDLKENPR-SLQAQRF---VDR-IKASPLKERIDIFDSIKKDGTNWS 84
           +A+A L   + E+L   E  R +L A  +   +D  +KA   ++ + ++  + + G    
Sbjct: 64  YASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPD 123

Query: 85  VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
              FN L+ A       ++  K F E  +   +PN  T+SI+I   C      +A KV  
Sbjct: 124 TYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFL 183

Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
            M   G  PN+ T+T +++ L KSG + +A  + ++M   G       YN L+ GL   G
Sbjct: 184 DMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSG 243

Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
           R + A ++   + + GL+PD  T+T+++ G    GR++EA  +  EA + G   +V  +N
Sbjct: 244 RADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYN 303

Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
            L +  CK     +   +   +++   +PD  +++ L++GL K G+I  A  +  +M R 
Sbjct: 304 VLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRA 363

Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
           G   D  + N+L+ GL      +   +E+A Q+  +M       D  TY  +I    KG 
Sbjct: 364 GCTPDVTVYNTLIDGL-----RKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGG 418

Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
           + ++AL  L   I       T+T+N ++  LC  G++D+A  L 
Sbjct: 419 RIEDAL-RLFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLF 461



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 149/303 (49%), Gaps = 8/303 (2%)

Query: 154 NVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
             + +  L+++  K+G  ++AL V   MG+ G +P+  T+N L+       RV+  +++ 
Sbjct: 88  TASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLF 147

Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
             ++N    P+V TY+ ++D  CK G   +A+++  +   RG  PN+ T+ ++ +G  K 
Sbjct: 148 EEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKS 207

Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
           G   K   L + M     +  ++ Y++L++GL + G+   A  +F+EM+  G + D    
Sbjct: 208 GHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTF 267

Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
            SL+ GL +          +A ++F++        D   Y ++I TL K K+ DEA    
Sbjct: 268 TSLVYGLGVAGRAS-----EARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIF 322

Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
               E G +P   TFN ++  LC  G+I  A +LL  M      P  T Y+ LI   D L
Sbjct: 323 GELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLI---DGL 379

Query: 454 EKS 456
            KS
Sbjct: 380 RKS 382



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 122/226 (53%), Gaps = 5/226 (2%)

Query: 88  FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
           F  L+  L +      A + F EA   G A +   ++++I   C      EA ++   + 
Sbjct: 267 FTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELE 326

Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
           ++G  P+V TF  L++ LCKSGR+ +A  +L  M R GC P++  YN L+ GL   GRVE
Sbjct: 327 EDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVE 386

Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
           EA ++L+ +++ G +PDV TY  ++D  CK GR  +A+ L  E   +G   N VT+NT+ 
Sbjct: 387 EAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTIL 445

Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCL----PDKISYSTLLNGLLKWG 309
           NG C  G   +   L   MK+        PD ++Y+TLLNG  + G
Sbjct: 446 NGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG 491



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 5/190 (2%)

Query: 62  KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
           K+  L E  +IF  +++DG    V  FN L+  L        A     +    G  P+  
Sbjct: 311 KSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVT 370

Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
            ++ +I          EA +++  M   GY P+V T+  L++  CK GR+++AL + +++
Sbjct: 371 VYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEI 430

Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN---DG-LKPDVYTYTAVMDGFCK 237
              G   N  TYN +L GLC  GRV+EAY++   +K    DG + PD  TYT +++G  +
Sbjct: 431 SAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQ 489

Query: 238 VGRSNEAMEL 247
            G S  A  L
Sbjct: 490 AGLSELANSL 499



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 84/213 (39%), Gaps = 40/213 (18%)

Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
           F  L  GY   G   K V  LK M+   C     +Y++L++  +K G  + A+++++ M 
Sbjct: 57  FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMG 116

Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
           + G   D    N L     M ++++   ++  +++FE+M  +                  
Sbjct: 117 QSGLRPDTYTFNVL-----MNAFKKAKRVDSVWKLFEEMQNQNCS--------------- 156

Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
                               P  IT++ +I A+C  G ++KAL +   M      P+  +
Sbjct: 157 --------------------PNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFT 196

Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
           Y  +I  L +      A  L+     +G++  R
Sbjct: 197 YTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATR 229


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.136    0.404 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,342,293,693
Number of Sequences: 23463169
Number of extensions: 301828920
Number of successful extensions: 883466
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7801
Number of HSP's successfully gapped in prelim test: 4640
Number of HSP's that attempted gapping in prelim test: 692944
Number of HSP's gapped (non-prelim): 74663
length of query: 479
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 333
effective length of database: 8,933,572,693
effective search space: 2974879706769
effective search space used: 2974879706769
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)