BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011714
(479 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 218/414 (52%), Gaps = 5/414 (1%)
Query: 60 RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
R++ L + ID+F + K S+ DFN LL A+V L + + + + G+ +
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
+TF+I+I C+C A ++ M GY P+ T LVN C+ R+ +A+ ++D
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
+M IG KP+I YN ++ LC RV +A++ ++ G++P+V TYTA+++G C
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
R ++A LL++ I++ +TPNV+T++ L + + K G ++ L + M + + PD ++YS
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
+L+NGL +I A +F MV G D N+L+ G C + +ED ++F
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC-----KAKRVEDGMKLFR 354
Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
+M+++ V++ TY +I+ + D+A G P T+N ++ LC G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
+++KAL++ M + +Y +I + + K +A +L+ + +G+ P
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 149/303 (49%), Gaps = 5/303 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K + + D F I++ G +V + L+ L + A + S+ + PN
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T+S ++ + EA+++ + M P++ T++ L+N LC R+ EA ++ D M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
GC ++ +YN L+ G C RVE+ ++ + GL + TY ++ GF + G
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
++A E ++ G++P++ T+N L G C G K + + + M+KR D ++Y+T+
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
+ G+ K GK+ A S+F + G + D +++ GLC K LL + ++ KM
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG-----LLHEVEALYTKM 496
Query: 362 TKK 364
++
Sbjct: 497 KQE 499
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
Query: 74 DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
D IKK T +V ++ LL A V + A + F E + P+ T+S +I C
Sbjct: 250 DMIKKKITP-NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTY 193
+ EA ++ D M G +V ++ L+N CK+ R+++ +++ +M + G N TY
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 194 NCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIE 253
N L++G G V++A E + G+ PD++TY ++ G C G +A+ + + +
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRP 313
R + ++VT+ T+ G CK G + L + + PD ++Y+T+++GL G +
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 314 AVSIFKEMVRFGF 326
+++ +M + G
Sbjct: 489 VEALYTKMKQEGL 501
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 4/203 (1%)
Query: 66 LKERID----IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
L +RID +FD + G V +N L+ E +K F E S GL N+
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T++ +I+ + D +A++ M G P++ T+ IL+ LC +G L++AL + + M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
+ +I TY +++G+C G+VEEA+ + ++ GLKPD+ TYT +M G C G
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 242 NEAMELLNEAIERGVTPNVVTFN 264
+E L + + G+ N T +
Sbjct: 487 HEVEALYTKMKQEGLMKNDCTLS 509
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 132/284 (46%), Gaps = 10/284 (3%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
+K + E ++F+ + + + + ++ L+ L + + + A + F S G +
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
+++ +I +C + K+ M G N T+ L+ ++G + +A E Q
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M G P+I TYN LL GLC G +E+A + +++ + D+ TYT V+ G CK G+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
EA L +G+ P++VT+ T+ +G C +G + L MK+ + + + S
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 510
Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS 344
G I + + K+M+ G+ ++ + G+C K+
Sbjct: 511 --------GDITLSAELIKKMLSCGYA--PSLLKDIKSGVCKKA 544
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 206/431 (47%), Gaps = 40/431 (9%)
Query: 55 QRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY 114
+R + I + + ID+F+S+ + + DFN L A+ + + + F
Sbjct: 40 ERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 99
Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
G+ + +T +IMI CYC K A V+ + GY P+ TF+ LVN C GR+ EA
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD---------- 224
+ ++D+M + +P++ T + L+ GLC GRV EA ++ + G +PD
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 225 -------------------------VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
V Y+ V+D CK G ++A+ L NE +G+ +
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFK 319
VVT+++L G C +G G +L+ M RN +PD +++S L++ +K GK+ A ++
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 320 EMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT 379
EM+ G D NSL+ G C +++ L +A Q+F+ M K D TY I+I +
Sbjct: 340 EMITRGIAPDTITYNSLIDGFC-----KENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 380 LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPS 439
K K+ D+ + G IP TIT+N ++ C GK++ A L M PS
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 440 RTSYDMLITKL 450
+Y +L+ L
Sbjct: 455 VVTYGILLDGL 465
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 187/385 (48%), Gaps = 7/385 (1%)
Query: 91 LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
L+ L + A+ YG P+ T+ ++ C + A + M +
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
+V ++I+++SLCK G +AL + ++M G K ++ TY+ L+ GLC G+ ++
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
+ML + + PDV T++A++D F K G+ EA EL NE I RG+ P+ +T+N+L +G+
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
CKE + + LM + C PD ++YS L+N K ++ + +F+E+ G +
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
N+L+ G C + L A ++F++M + TYGI++ L + ++AL
Sbjct: 421 ITYNTLVLGFC-----QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 391 IHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITK 449
+ ++ + I +N +I +C K+D A L + + P +Y+++I
Sbjct: 476 -EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 450 LDQLEKSYDACALYGAALKQGVIPQ 474
L + +A L+ + G P
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPD 559
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 168/344 (48%), Gaps = 5/344 (1%)
Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
A+ F + + + +SI+I C F +A + + M G +V T++ L+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
LC G+ + ++L +M P++ T++ L+ G++ EA E+ + G+ P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
D TY +++DGFCK +EA ++ + + +G P++VT++ L N YCK G+ L
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
+ + + +P+ I+Y+TL+ G + GK+ A +F+EMV G LL GLC
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC-- 466
Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
+ L A ++FEKM K G Y I+I + K D+A + G P
Sbjct: 467 ---DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
+T+N +I LC +G + +A +L M E P +Y++LI
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 180/359 (50%), Gaps = 6/359 (1%)
Query: 70 IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
+D+F +++ SV ++ ++ +L + A+ F+E G+ + T+S +I
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
CN + + K++ M P+V TF+ L++ K G+L EA E+ ++M G P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
TYN L+ G C + EA +M + + G +PD+ TY+ +++ +CK R ++ M L
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
E +G+ PN +T+NTL G+C+ G L + M R P ++Y LL+GL G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
++ A+ IF++M + + + N ++ G+C S ++DA+ +F ++ K D
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK-----VDDAWSLFCSLSDKGVKPD 524
Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA-LCGEGKIDKALLL 427
TY ++I L K EA + E G P T+N +I+A L G G I L+
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELI 583
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 191/412 (46%), Gaps = 20/412 (4%)
Query: 24 PQFNKLVVFAAASLSTAESLDL--KENPRSLQAQRF-----VDRI-KASPLKERIDIFDS 75
P N+L S ++A +LDL K R+++A +D + K + + +F+
Sbjct: 215 PVLNRL----CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 76 IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
++ G V ++ L+ L + + K E + P+ TFS +I + +
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
EA+++ + M G P+ T+ L++ CK L EA ++ D M GC+P+I TY+
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
L+ C RV++ + + + GL P+ TY ++ GFC+ G+ N A EL E + RG
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
V P+VVT+ L +G C G K + + + M+K Y+ +++G+ K+ A
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
S+F + G + D N ++ GLC K S E D+L F KM + D TY
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML------FRKMKEDGCTPDDFTYN 564
Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
I+IR G ++ + G + T VI L + ++DK+ L
Sbjct: 565 ILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLDKSFL 615
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 151/306 (49%), Gaps = 7/306 (2%)
Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
++ +A+++ + M + P +N L + + + ++ +G++ D+YT T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
+++ +C+ + A +L A + G P+ +TF+TL NG+C EG + V L+ M +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
PD ++ STL+NGL G++ A+ + MV +GF+ DE +L LC KS
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC-KSGNSA- 227
Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITF 408
L D ++ E+ K SV Y IVI +L K D+AL L + +EM I +T+
Sbjct: 228 LALDLFRKMEERNIKASVVQ---YSIVIDSLCKDGSFDDAL-SLFNEMEMKGIKADVVTY 283
Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
+++I LC +GK D +L M IP ++ LI + K +A LY +
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 469 QGVIPQ 474
+G+ P
Sbjct: 344 RGIAPD 349
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 207/417 (49%), Gaps = 8/417 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
KA + + + D + + V +N +L +L + + A++ P+
Sbjct: 184 KAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T++I+I C + A K++D M D G P+V T+ +LVN +CK GRL EA++ L+ M
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
GC+PN+ T+N +L+ +C GR +A ++L ++ G P V T+ +++ C+ G
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
A+++L + + G PN +++N L +G+CKE + + L+ M R C PD ++Y+T+
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
L L K GK+ AV I ++ G N+++ GL K A ++ ++M
Sbjct: 421 LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK-----AIKLLDEM 475
Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
K D TY ++ L + K DEA+ H MG P +TFN+++ LC +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKPQ 478
D+A+ L M P+ TSY +LI L + +A L +G++ + +
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAE 592
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 223/459 (48%), Gaps = 24/459 (5%)
Query: 20 HNKIPQFNKLVVFAAASLSTAESLDLKENPRS-LQAQRFVDRIKASPLKERIDIFDSIKK 78
H + + NKL V S S + + L R+ L ++++S L R F+++
Sbjct: 21 HREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAASKVESSGLNGRAQKFETLSS 80
Query: 79 DGTN-------------WSVSDF--NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
+N +++ D N+ L +V E E KF +G P+
Sbjct: 81 GYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPC 140
Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
+ +IR +C +A K+++ + +G P+V T+ ++++ CK+G + AL VLD R
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---R 197
Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
+ P++ TYN +L+ LC G++++A E+L + PDV TYT +++ C+
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
AM+LL+E +RG TP+VVT+N L NG CKEG + + L M C P+ I+++ +L
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
+ G+ A + +M+R GF N L+ LC K LL A + EKM +
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC-----RKGLLGRAIDILEKMPQ 372
Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
+ +Y ++ K KK D A+ +L + G P +T+N ++ ALC +GK++
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
A+ +L + P +Y+ +I L + K+ A L
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 198/413 (47%), Gaps = 8/413 (1%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
++ L+E +++ G + L+ L + A K G P+
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
T+++MI YC + A V+D M P+V T+ ++ SLC SG+LK+A+EVLD+
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M + C P++ TY L++ C V A ++L +++ G PDV TY +++G CK GR
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
+EA++ LN+ G PNV+T N + C G M LL M ++ P ++++
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
L+N L + G + A+ I ++M + G + + N LL G C +EK + + A + E+
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC----KEKKM-DRAIEYLER 404
Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
M + D TY ++ L K K ++A+ L+ G P IT+N VI L GK
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
KA+ LL M P +Y L+ L + K +A + + G+ P
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 214/412 (51%), Gaps = 8/412 (1%)
Query: 66 LKERIDIFDSIKKDGTNW--SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTF 123
L++ + +FD + K+ T SVS ++ L+ L + E A + G P++ T+
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVS-YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 124 SIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR 183
+++I+ C++ +A + D M G PNV T+T+L++ LC+ G+++EA V +M +
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 184 IGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNE 243
P++ TYN L+ G C GRV A+E+L ++ KP+V T+ +M+G C+VG+ +
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 244 AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLN 303
A+ LL ++ G++P++V++N L +G C+EG LL M + PD ++++ ++N
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
K GK A + M+R G +DE +L+ G+C K + + DA + E + K
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC-KVGKTR----DALFILETLVK 539
Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
+T P + +++ L KG K E L L ++G +P +T+ ++ L G I
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
+ +L LM +P+ Y ++I L Q + +A L A GV P
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 175/400 (43%), Gaps = 76/400 (19%)
Query: 146 MFDNGYHPNVTTFTILVNSLCKSG-----------------------------------R 170
M +G+ + + +VN+LCK+G
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245
Query: 171 LKEALEVLDQMGR-IGCKPNIQTYNCLLKGLCYVGRVEEA------------------YE 211
L++AL+V D M + + C PN +Y+ L+ GLC VGR+EEA Y
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 212 MLMNVKND-----------------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
+L+ D G KP+V+TYT ++DG C+ G+ EA + + ++
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
+ P+V+T+N L NGYCK+G + LL +M+KR C P+ +++ L+ GL + GK A
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
V + K M+ G D N L+ GLC + + AY++ M D T+
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGH-----MNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
+I K K D A L + G +T +I +C GK AL +L + +
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 435 AKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
+ + S ++++ L + K + A+ G K G++P
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPS 580
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 6/290 (2%)
Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
G + N Y+ LL L + AY ++ DG + Y +++ CK G + A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLN 303
+++ ++ G + +L G+C+ + + +M K C P+ +SYS L++
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274
Query: 304 GLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
GL + G++ A + +M G + R L++ LC ++ L++ A+ +F++M
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC-----DRGLIDKAFNLFDEMIP 329
Query: 364 KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
+ + TY ++I L + K +EA ++ P IT+N +I C +G++
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389
Query: 424 ALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
A LL +M + A P+ +++ L+ L ++ K Y A L L G+ P
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 130/305 (42%), Gaps = 22/305 (7%)
Query: 37 LSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMAL 95
L T + + P SL +D + K +KE + + I K G SV + L+ L
Sbjct: 534 LETLVKMRILTTPHSLNV--ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 96 VMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV 155
+ + + + G PN + ++I+I C EA K++ M D+G PN
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY----VGRVEEAYE 211
T+T++V +G+L ALE + M G + N + Y+ LL+G + EE+
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711
Query: 212 MLMNVKN------DGLKPDVYTYTAVMDG--------FCKVGRSNEAMELLNEAIERGVT 257
+ ++ + L V + G CK GR++E+ +L+ +ERGV
Sbjct: 712 SDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVF 771
Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
+ + YC + K + L+ L+ K +P S+ ++ GL K G A +
Sbjct: 772 LE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERAREL 830
Query: 318 FKEMV 322
E++
Sbjct: 831 VMELL 835
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 113/269 (42%), Gaps = 27/269 (10%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
I++ + I + +K G +V + ++ L E A K S G++PN
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGR---------- 170
T+++M++ Y N A + + M + GY N ++ L+ S +
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711
Query: 171 ------------LKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN 218
+ E + V++Q+G GC + + L+ LC GR +E+ +++ NV
Sbjct: 712 SDIALRETDPECINELISVVEQLG--GCISGLCIF--LVTRLCKEGRTDESNDLVQNVLE 767
Query: 219 DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMK 278
G+ + +M+ +C + + MEL+ ++ G P+ +F + G KEG +
Sbjct: 768 RGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAER 826
Query: 279 GVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
L+ + N + +K T + L++
Sbjct: 827 ARELVMELLTSNGVVEKSGVLTYVECLME 855
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 196 bits (497), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 210/404 (51%), Gaps = 5/404 (1%)
Query: 70 IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
I +F+ ++ G + N ++ + + ++ A F + G P+ TF+ ++
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG 162
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
YC+ N +A + D + G+ PNV T+T L+ LCK+ L A+E+ +QMG G +PN
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
+ TYN L+ GLC +GR +A +L ++ ++P+V T+TA++D F KVG+ EA EL N
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
I+ V P+V T+ +L NG C G + + LM++ C P+++ Y+TL++G K
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342
Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
++ + IF EM + G + L++G C+ + A +VF +M+ + + D
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV-----AQEVFNQMSSRRAPPD 397
Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
TY +++ L K ++AL+ + + +T+ +IQ +C GK++ A L
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
++ P+ +Y +I+ + ++A +L+ + G +P
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 209/411 (50%), Gaps = 9/411 (2%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ +D+F + S+ DF LL + +N + + F + G+ P T +I
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ C C + A + M G+ P++ TFT L+N C R+++A+ + DQ+ +G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
KPN+ TY L++ LC + A E+ + +G +P+V TY A++ G C++GR +A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
LL + ++R + PNV+TF L + + K G M+ L +M + + PD +Y +L+NGL
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
+G + A +F M R G +E + +L+ G C + +ED ++F +M++K
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFC-----KSKRVEDGMKIFYEMSQKG 358
Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
V + TY ++I+ + D A + P T+N ++ LC GK++KAL
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 426 LLLFLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDA-CALYGAALKQGVI 472
++ M + + +Y ++I KL ++E ++D C+L+ +K VI
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 172/378 (45%), Gaps = 40/378 (10%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+++ I +FD I G +V + L+ L AV+ F++ + G PN T++
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ C + +A ++ M PNV TFT L+++ K G+L EA E+ + M ++
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
P++ TY L+ GLC G ++EA +M ++ +G P+ YT ++ GFCK R + M
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
++ E ++GV N +T+ L GYC G P + M R PD +Y+ LL+GL
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
GK+ A+ IF+ M + +++ +++G+C + +EDA+ +F + K
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC-----KLGKVEDAFDLFCSLFSK- 462
Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
G P IT+ +I C G I +A
Sbjct: 463 ----------------------------------GMKPNVITYTTMISGFCRRGLIHEAD 488
Query: 426 LLLFLMYEHAKIPSRTSY 443
L M E +P+ + Y
Sbjct: 489 SLFKKMKEDGFLPNESVY 506
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 117/238 (49%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
+K L E ++++ + + V + L+ L M + A + F G PN
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
++ +I +C + K+ M G N T+T+L+ C GR A EV +Q
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M P+I+TYN LL GLC G+VE+A + ++ + ++ TYT ++ G CK+G+
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
+A +L +G+ PNV+T+ T+ +G+C+ G + L K MK+ LP++ Y
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 5/303 (1%)
Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
+ +AL++ +M P+I + LL + + R + + ++ G+ P + T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
VM C + A L + ++ G P++VTF +L NGYC + L +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
P+ ++Y+TL+ L K + AV +F +M G + N+L+ GLC E
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC-----EIG 237
Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
DA + M K+ + T+ +I K K EA + I+M P T+
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297
Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
++I LC G +D+A + +LM + P+ Y LI + ++ D ++ ++
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 470 GVI 472
GV+
Sbjct: 358 GVV 360
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 195 bits (495), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 201/414 (48%), Gaps = 6/414 (1%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSY-GLAPN 119
I+ L + I + + + G +WS N ++ E A+ F E S+ G P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
+TF+ ++ C A +++D M GY P+V T+ +++ LCK G +KEA+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
QM C PN TYN L+ LC +VEEA E+ + + G+ PDV T+ +++ G C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
AMEL E +G P+ T+N L + C +G + + +LK M+ C I+Y+
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
TL++G K K R A IF EM G + N+L+ GLC + +EDA Q+ +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC-----KSRRVEDAAQLMD 529
Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
+M + D TY ++ +G +A + G P +T+ +I LC G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
+++ A LL + + +Y+ +I L + K+ +A L+ L+Q P
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 196/371 (52%), Gaps = 8/371 (2%)
Query: 80 GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
G VS FN L+ AL ++ A+ + SYGL P+ TF+ +++ Y + D A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG-RIGCKPNIQTYNCLLK 198
++ + M + G + + ++V+ CK GR+++AL + +M + G P+ T+N L+
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
GLC G V+ A E++ + +G PDVYTY +V+ G CK+G EA+E+L++ I R +P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
N VT+NTL + CKE + L +++ + LPD ++++L+ GL R A+ +F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
+EM G E DE N L+ LC K L++A + ++M TY +I
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGK-----LDEALNMLKQMELSGCARSVITYNTLID 478
Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPR-TITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
K KT EA + +E+ + R ++T+N +I LC +++ A L+ M +
Sbjct: 479 GFCKANKTREAE-EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 438 PSRTSYDMLIT 448
P + +Y+ L+T
Sbjct: 538 PDKYTYNSLLT 548
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 194/391 (49%), Gaps = 7/391 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
KA +K I+I D + ++G + V +N ++ L L E + AV+ + + +PN+
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T++ +I C +N EA ++ + G P+V TF L+ LC + + A+E+ ++M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
GC+P+ TYN L+ LC G+++EA ML ++ G V TY ++DGFCK ++
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
EA E+ +E GV+ N VT+NTL +G CK L+ M PDK +Y++L
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
L + G I+ A I + M G E D +L+ GLC + +E A ++ +
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC-----KAGRVEVASKLLRSI 601
Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRTITFNNVIQALC-GEG 419
K P Y VI+ L + +KT EA+ +E P +++ V + LC G G
Sbjct: 602 QMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGG 661
Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
I +A+ L + E +P +S ML L
Sbjct: 662 PIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 191/389 (49%), Gaps = 6/389 (1%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
+N +L LV N + ++ S +G+ P+ TF+++I+ C + A +++ M
Sbjct: 157 YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMP 216
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
G P+ TFT ++ + G L AL + +QM GC + + N ++ G C GRVE
Sbjct: 217 SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276
Query: 208 EAYEMLMNVKN-DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
+A + + N DG PD YT+ +++G CK G A+E+++ ++ G P+V T+N++
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
+G CK G + V +L M R+C P+ ++Y+TL++ L K ++ A + + + G
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
D NSL++GLC+ A ++FE+M K D TY ++I +L K
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRV-----AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
DEAL L G IT+N +I C K +A + M H + +Y+ L
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 447 ITKLDQLEKSYDACALYGAALKQGVIPQR 475
I L + + DA L + +G P +
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 165/331 (49%), Gaps = 7/331 (2%)
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDN-GYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
TF I+I Y E V+D M D G P+ + ++N L LK +
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAK 179
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M G KP++ T+N L+K LC ++ A ML ++ + GL PD T+T VM G+ + G
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC-LPDKISYS 299
+ A+ + + +E G + + V+ N + +G+CKEG + ++ M ++ PD+ +++
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
TL+NGL K G ++ A+ I M++ G++ D NS++ GLC K E K +A +V +
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC-KLGEVK----EAVEVLD 354
Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
+M + + TY +I TL K + +EA G +P TFN++IQ LC
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
A+ L M P +Y+MLI L
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 199/431 (46%), Gaps = 40/431 (9%)
Query: 84 SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN----------- 132
S+ DF LL A L ET + F + YG++ + ++F+I+I C+C
Sbjct: 70 SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVL 129
Query: 133 ------------------------KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKS 168
N +A ++ M +GY PNV + L++ LCK+
Sbjct: 130 GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKN 189
Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
G L ALE+L++M + G ++ TYN LL GLCY GR +A ML ++ + PDV T+
Sbjct: 190 GELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTF 249
Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
TA++D F K G +EA EL E I+ V PN VT+N++ NG C G LM
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309
Query: 289 RNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEK 348
+ C P+ ++Y+TL++G K+ + + +F+ M GF D N+L+ G C +
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC-----QV 364
Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
L A +F M + D T+ I++ L + + AL+ E + +
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424
Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALK 468
N +I LC K++KA L + P +Y ++I L + +A L +
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Query: 469 QGVIPQRKPQD 479
+G+I Q +D
Sbjct: 485 EGIICQMNAED 495
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 5/312 (1%)
Query: 78 KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
K G +V +N L+ L E A++ +E GL + T++ ++ C +
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
+A +++ M +P+V TFT L++ K G L EA E+ +M + PN TYN ++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
GLC GR+ +A + + + G P+V TY ++ GFCK +E M+L G
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
++ T+NTL +GYC+ G + + M R PD I++ LL+GL G+I A+
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
F +M + N ++ GLC + D +E A+++F ++ + D TY I+I
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLC-----KADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 378 RTLGKGKKTDEA 389
L K EA
Sbjct: 464 LGLCKNGPRREA 475
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 135/280 (48%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K L +++ + ++K G V +N LL L A + + + P+
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TF+ +I + + + EA+++ M + PN T+ ++N LC GRL +A + D M
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
GC PN+ TYN L+ G C V+E ++ + +G D++TY ++ G+C+VG+
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
A+++ + R VTP+++T L +G C G + M++ ++Y+ +
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
++GL K K+ A +F + G + D R ++ GLC
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 7/282 (2%)
Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
S R ++A + +M P+I + LL + R E ++ G+ D+Y+
Sbjct: 49 SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYS 108
Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
+T ++ FC+ R + A+ +L + ++ G P++VTF +L +G+C L+ LM
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WE 346
K P+ + Y+TL++GL K G++ A+ + EM + G D N+LL GLC W
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW- 227
Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
DA ++ M K+ D T+ +I K DEA I+ P +
Sbjct: 228 -----SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
T+N++I LC G++ A LM P+ +Y+ LI+
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 142/333 (42%), Gaps = 40/333 (12%)
Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
P++ FT L+ + R + + +M G ++ ++ L+ C R+ A +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
L + G +P + T+ +++ GFC V R +A L+ ++ G PNVV +NTL +G CK
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 273 EG-----------TPMKGVG------------------------LLKLMKKRNCLPDKIS 297
G KG+G +L+ M KR+ PD ++
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
++ L++ +K G + A ++KEM++ + + NS++ GLCM L DA +
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR-----LYDAKKT 303
Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
F+ M K + TY +I K + DE + G T+N +I C
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363
Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
GK+ AL + M P ++ +L+ L
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)
Query: 48 NPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVK 106
NP + +D +K L E +++ + + + + +N ++ L M A K
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Query: 107 FFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLC 166
F +S G PN T++ +I +C E K+ M G++ ++ T+ L++ C
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362
Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
+ G+L+ AL++ M P+I T+ LL GLC G +E A +++ +
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422
Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
Y ++ G CK + +A EL GV P+ T+ + G CK G + L++ M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Query: 287 KK 288
K+
Sbjct: 483 KE 484
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 122/278 (43%), Gaps = 5/278 (1%)
Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
L G + R E+A+ + + + P + +T ++ + R + + G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
++ ++ +F L + +C+ + +L M K P +++ +LL+G +I A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
S+ MV+ G+E + + N+L+ GLC K+ E L A ++ +M KK D TY
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLC-KNGE----LNIALELLNEMEKKGLGADVVTYNT 216
Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
++ L + +A L ++ P +TF +I +G +D+A L M + +
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
P+ +Y+ +I L + YDA + +G P
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 216/413 (52%), Gaps = 5/413 (1%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
I+ L + +D+F + + S++DF+ LL A+ + + + + + + G+ N
Sbjct: 57 IRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
T +I++ C+C + A + M G+ P++ TF L+N C+ R+ +AL + DQ
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M +G KPN+ YN ++ GLC +V+ A ++L ++ DG+ PDV TY +++ G C GR
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
++A +++ +R + P+V TFN L + KEG + + M +R+ PD ++YS
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
L+ GL + ++ A +F MV G D + L+ G C + +E ++F +
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC-----KSKKVEHGMKLFCE 351
Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
M+++ V + TY I+I+ + K + A + G P IT+N ++ LC GK
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
I+KAL++L M ++ +Y+++I + + + DA +Y + QG++P
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 196/404 (48%), Gaps = 5/404 (1%)
Query: 70 IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
I +++ ++ G ++ N LL ++ A+ F + G P+ TF ++
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
+C + ++A + D M GY PNV + +++ LCKS ++ AL++L++M + G P+
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
+ TYN L+ GLC GR +A M+ + + PDV+T+ A++D K GR +EA E
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
E I R + P++VT++ L G C + + M + C PD ++YS L+NG K
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
K+ + +F EM + G + L++G C L A ++F +M +
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC-----RAGKLNVAEEIFRRMVFCGVHPN 395
Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
TY +++ L K ++AL+ L + G +T+N +I+ +C G++ A +
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC 455
Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
+ +P +Y ++ L + +A AL+ + G++P
Sbjct: 456 SLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 146/300 (48%), Gaps = 5/300 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K+ + +D+ + ++KDG V +N L+ L A + S + + P+ +
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TF+ +I + EA + + M P++ T+++L+ LC RL EA E+ M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
GC P++ TY+ L+ G C +VE ++ + G+ + TYT ++ G+C+ G+
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
N A E+ + GV PN++T+N L +G C G K + +L M+K D ++Y+ +
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
+ G+ K G++ A I+ + G D +++ GL +K L +A +F KM
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL-----YKKGLRREADALFRKM 492
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 120/235 (51%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
+K + E + ++ + + + + ++ L+ L M + + A + F S G P+
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
T+SI+I YC K+ M G N T+TIL+ C++G+L A E+ +
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M G PNI TYN LL GLC G++E+A +L +++ +G+ D+ TY ++ G CK G
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
+A ++ +G+ P++ T+ T+ G K+G + L + MK+ LP++
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 213/461 (46%), Gaps = 38/461 (8%)
Query: 49 PRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
P S+ Q + + K + + E + + + + G FND+++ L + A K
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 108 FSEASSYGLAPNSWTFSIMIRCYCN------KNDFF------------------------ 137
+ G AP+ T+ ++ C D F
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRL 369
Query: 138 -EARKVI-DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
+A+ V+ D + G P+V T+ L+ K G + ALEVL M GCKPN+ +Y
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
L+ G C +G+++EAY +L + DGLKP+ + ++ FCK R EA+E+ E +G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
P+V TFN+L +G C+ + LL+ M + + ++Y+TL+N L+ G+I+ A
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
+ EMV G +DE NSL++GLC +K A +FEKM + + I
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK-----ARSLFEKMLRDGHAPSNISCNI 604
Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
+I L + +EA+ + G P +TFN++I LC G+I+ L + +
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
P +++ L++ L + YDAC L ++ G +P +
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 195/381 (51%), Gaps = 7/381 (1%)
Query: 88 FNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
FN L+ V + A S+ +SYG+ P+ T++ +I Y + A +V+ M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
+ G PNV ++TILV+ CK G++ EA VL++M G KPN +NCL+ C R+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
EA E+ + G KPDVYT+ +++ G C+V A+ LL + I GV N VT+NTL
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
N + + G + L+ M + D+I+Y++L+ GL + G++ A S+F++M+R G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
N L+ GLC ++E+A + ++M + S D T+ +I L + +
Sbjct: 596 APSNISCNILINGLC-----RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
++ L G P T+TFN ++ LC G + A LLL E +P+ ++ +L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 447 ITKLDQLEKSYDACALYGAAL 467
+ + +++ D Y AA
Sbjct: 711 LQSIIP-QETLDRRRFYNAAF 730
Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 200/419 (47%), Gaps = 37/419 (8%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
+N +L LV N + A F + S + P +TF ++++ +C N+ A ++ M
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
+G PN + L++SL K R+ EAL++L++M +GC P+ +T+N ++ GLC R+
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-------------------- 247
EA +M+ + G PD TY +M+G CK+GR + A +L
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364
Query: 248 ----LNEA--------IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
L++A G+ P+V T+N+L GY KEG + +L M+ + C P+
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
SY+ L++G K GKI A ++ EM G + + N L+ C ++ + +A
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC-----KEHRIPEAV 479
Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
++F +M +K D T+ +I L + + AL L I G + T+T+N +I A
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
G+I +A L+ M +Y+ LI L + + A +L+ L+ G P
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 142/279 (50%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K + E ++ + + DG + FN L+ A + AV+ F E G P+ +
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TF+ +I C ++ A ++ M G N T+ L+N+ + G +KEA +++++M
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
G + TYN L+KGLC G V++A + + DG P + +++G C+ G
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
EA+E E + RG TP++VTFN+L NG C+ G G+ + + ++ PD ++++TL
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
++ L K G + A + E + GF + R + LL+ +
Sbjct: 676 MSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 168/360 (46%), Gaps = 10/360 (2%)
Query: 114 YGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKE 173
Y P ++++++ + N A V M P + TF +++ + C +
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 174 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 233
AL +L M + GC PN Y L+ L RV EA ++L + G PD T+ V+
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
G CK R NEA +++N + RG P+ +T+ L NG CK G L + K P
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----P 351
Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMV-RFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
+ + ++TL++G + G++ A ++ +MV +G D NSL+ G W+E L+
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY----WKE-GLVG 406
Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
A +V M K + +Y I++ K K DEA L+ G P T+ FN +I
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVI 472
A C E +I +A+ + M P +++ LI+ L ++++ A L + +GV+
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 35/249 (14%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K + E ++IF + + G V FN L+ L ++E + A+ + S G+ N+
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 122 TFSIMIRCYCNKNDFFEARKVID---------------------C--------------M 146
T++ +I + + + EARK+++ C M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
+G+ P+ + IL+N LC+SG ++EA+E +M G P+I T+N L+ GLC GR+
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
E+ M ++ +G+ PD T+ +M CK G +A LL+E IE G PN T++ L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 267 FNGYCKEGT 275
+ T
Sbjct: 711 LQSIIPQET 719
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
++ +KE + + + G+ +N L+ L E + A F + G AP++
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
+ +I+I C EA + M G P++ TF L+N LC++GR+++ L + +
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
+ G P+ T+N L+ LC G V +A +L DG P+ T++ ++
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%)
Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
+Y +V+ L G A + + P TF V++A C +ID AL LL M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
+H +P+ Y LI L + + +A L G +P
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 192 bits (487), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 201/429 (46%), Gaps = 43/429 (10%)
Query: 68 ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
+ +D+F + + +V DFN L A+ + E + + S G+A + +T SIMI
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
C+C A + + GY P+ F L+N LC R+ EALE++D+M +G K
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 188 PNIQTYNCLLKGLCYVGRVEEAY-----------------------------------EM 212
P + T N L+ GLC G+V +A E+
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
L ++ +K D Y+ ++DG CK G + A L NE +G +++T+NTL G+C
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
G G LL+ M KR P+ +++S L++ +K GK+R A + KEM++ G +
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
NSL+ G C +++ LE+A Q+ + M K D T+ I+I K + D+ L
Sbjct: 371 YNSLIDGFC-----KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL-- 450
G I T+T+N ++Q C GK++ A L M P SY +L+ L
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 451 -DQLEKSYD 458
+LEK+ +
Sbjct: 486 NGELEKALE 494
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 199/397 (50%), Gaps = 13/397 (3%)
Query: 75 SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
+IK D +S+ ++ L + A F+E G + T++ +I +CN
Sbjct: 258 NIKLDAVKYSI-----IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
+ + K++ M PNV TF++L++S K G+L+EA ++L +M + G PN TYN
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
L+ G C R+EEA +M+ + + G PD+ T+ +++G+CK R ++ +EL E R
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
GV N VT+NTL G+C+ G L + M R PD +SY LL+GL G++ A
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
+ IF ++ + E+D + ++ G+C S ++DA+ +F + K D Y
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASK-----VDDAWDLFCSLPLKGVKLDARAYN 547
Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
I+I L + +A I E GH P +T+N +I+A G+ A L+ M
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS 607
Query: 435 AKIPSRTSYDMLITKLD--QLEKSY-DACALYGAALK 468
++ M+I L +L+KS+ D + A+LK
Sbjct: 608 GFPADVSTVKMVINMLSSGELDKSFLDMLSTTRASLK 644
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 207/410 (50%), Gaps = 9/410 (2%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ E +++ D + + G ++ N L+ L + + AV G PN T+
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ C A +++ M + + ++I+++ LCK G L A + ++M G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
K +I TYN L+ G C GR ++ ++L ++ + P+V T++ ++D F K G+ EA
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
+LL E ++RG+ PN +T+N+L +G+CKE + + ++ LM + C PD ++++ L+NG
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
K +I + +F+EM G + N+L++G C + LE A ++F++M +
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC-----QSGKLEVAKKLFQEMVSRR 468
Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKA 424
D +Y I++ L + ++AL + IE + I + +I +C K+D A
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKAL-EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Query: 425 L-LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
L L + K+ +R +Y+++I++L + + A L+ ++G P
Sbjct: 528 WDLFCSLPLKGVKLDAR-AYNIMISELCRKDSLSKADILFRKMTEEGHAP 576
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 173/366 (47%), Gaps = 8/366 (2%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K L ++F+ ++ G + +N L+ + K + ++PN
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TFS++I + + EA +++ M G PN T+ L++ CK RL+EA++++D M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
GC P+I T+N L+ G C R+++ E+ + G+ + TY ++ GFC+ G+
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
A +L E + R V P++V++ L +G C G K + + ++K D Y +
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
++G+ K+ A +F + G ++D R N ++ LC KD L A +F KM
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC-----RKDSLSKADILFRKM 569
Query: 362 TKKVSVTDPGTYGIVIRT-LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
T++ D TY I+IR LG T A L ++ P ++ ++ + G+
Sbjct: 570 TEEGHAPDELTYNILIRAHLGDDDATTAA--ELIEEMKSSGFPADVSTVKMVINMLSSGE 627
Query: 421 IDKALL 426
+DK+ L
Sbjct: 628 LDKSFL 633
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 124/269 (46%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
+K L+E + + + G + +N L+ N E A++ S G P+
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
TF+I+I YC N + ++ M G N T+ LV C+SG+L+ A ++ +
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M +P+I +Y LL GLC G +E+A E+ ++ ++ D+ Y ++ G C +
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK 523
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
++A +L +GV + +N + + C++ + K L + M + PD+++Y+
Sbjct: 524 VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNI 583
Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
L+ L A + +EM GF D
Sbjct: 584 LIRAHLGDDDATTAAELIEEMKSSGFPAD 612
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 40/204 (19%)
Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
++++A++L + I+ P V+ FN LF+ K + L K M+ + + S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
++N + K+ A S ++++ G+E D + N+LL GLC++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC--------------- 172
Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
+ EAL + +EMGH P IT N ++ LC G
Sbjct: 173 -------------------------RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 420 KIDKALLLLFLMYEHAKIPSRTSY 443
K+ A++L+ M E P+ +Y
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTY 231
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 110/269 (40%), Gaps = 5/269 (1%)
Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
+ ++A ++ ++ P V + + K + + L + +G+ ++ T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
+ N +C+ + + K PD + ++TLLNGL ++ A+ + MV
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
G + +N+L+ GLC+ + DA + ++M + + TYG V+ + K
Sbjct: 188 GHKPTLITLNTLVNGLCLNGK-----VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
+T A+ L E + ++ +I LC +G +D A L M +Y+
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIP 473
LI + D L +K+ + P
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 29/190 (15%)
Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMV------------RFGFEVDERMMNSLLRGLCMK 343
+SY L+ L K AV +F++M+ R + + L+ LC K
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALC-K 112
Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
E K + Y T I+I + +K A + +++G+ P
Sbjct: 113 QMESKGIAHSIY----------------TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEP 156
Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
T+ FN ++ LC E ++ +AL L+ M E P+ + + L+ L K DA L
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 464 GAALKQGVIP 473
++ G P
Sbjct: 217 DRMVETGFQP 226
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 195/418 (46%), Gaps = 40/418 (9%)
Query: 68 ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
+ ID+F + +V DF+ L A+ + + + + G+A N +T SIMI
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
C+C A + + GY PN TF+ L+N LC GR+ EALE++D+M +G K
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 188 PNIQTYNCLLKGLCYVGRVEEAY-----------------------------------EM 212
P++ T N L+ GLC G+ EA E+
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
L ++ +K D Y+ ++DG CK G + A L NE +G+T N++T+N L G+C
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
G G LL+ M KR P+ +++S L++ +K GK+R A + KEM+ G D
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
SL+ G C +++ L+ A Q+ + M K + T+ I+I K + D+ L
Sbjct: 371 YTSLIDGFC-----KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
G + T+T+N +IQ C GK++ A L M P+ +Y +L+ L
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 188/417 (45%), Gaps = 40/417 (9%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ E +++ D + + G + N L+ L + ++ A+ + YG PN+ T+
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ C A +++ M + + ++I+++ LCK G L A + ++M G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 186 CKPNIQTYNCLLKGLCYVGR-----------------------------------VEEAY 210
NI TYN L+ G C GR + EA
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
E+ + + G+ PD TYT+++DGFCK ++A ++++ + +G PN+ TFN L NGY
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
CK G+ L + M R + D ++Y+TL+ G + GK+ A +F+EMV +
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
LL GLC EK A ++FEK+ K D G Y I+I + K D+A
Sbjct: 474 VTYKILLDGLCDNGESEK-----ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
G P T+N +I LC +G + +A LL M E P +Y++LI
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 182/354 (51%), Gaps = 10/354 (2%)
Query: 75 SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
+IK D +S+ ++ L + A F+E G+ N T++I+I +CN
Sbjct: 258 NIKLDAVKYSI-----IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 312
Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
+ + K++ M +PNV TF++L++S K G+L+EA E+ +M G P+ TY
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 372
Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
L+ G C +++A +M+ + + G P++ T+ +++G+CK R ++ +EL + R
Sbjct: 373 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 432
Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
GV + VT+NTL G+C+ G L + M R P+ ++Y LL+GL G+ A
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
+ IF+++ + E+D + N ++ G+C S ++DA+ +F + K TY
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASK-----VDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
I+I L K EA + E GH P T+N +I+A G+G K++ L+
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 163/324 (50%), Gaps = 7/324 (2%)
Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
G N+ T +I++N C+ +L A + ++ ++G +PN T++ L+ GLC GRV EA
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
E++ + G KPD+ T +++G C G+ EAM L+++ +E G PN VT+ + N
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
CK G + LL+ M++RN D + YS +++GL K G + A ++F EM G +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 330 ERMMNSLLRGLC-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDE 388
N L+ G C W+ D ++ M K+ + T+ ++I + K K E
Sbjct: 298 IITYNILIGGFCNAGRWD------DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 389 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 448
A I G P TIT+ ++I C E +DKA ++ LM P+ ++++LI
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 449 KLDQLEKSYDACALYGAALKQGVI 472
+ + D L+ +GV+
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVV 435
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 157/326 (48%), Gaps = 6/326 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K L ++F+ ++ G ++ +N L+ + K + + PN
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TFS++I + + EA ++ M G P+ T+T L++ CK L +A +++D M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
GC PNI+T+N L+ G C R+++ E+ + G+ D TY ++ GFC++G+
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
N A EL E + R V PN+VT+ L +G C G K + + + ++K D Y+ +
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
++G+ K+ A +F + G + + N ++ GLC +K L +A +F KM
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC-----KKGPLSEAELLFRKM 569
Query: 362 TKKVSVTDPGTYGIVIRT-LGKGKKT 386
+ D TY I+IR LG G T
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDAT 595
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 1/285 (0%)
Query: 46 KENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA 104
K NP + +D +K L+E ++ + G + L+ N + A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 105 VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
+ S G PN TF+I+I YC N + ++ M G + T+ L+
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
C+ G+L A E+ +M PNI TY LL GLC G E+A E+ ++ ++ D
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
+ Y ++ G C + ++A +L +GV P V T+N + G CK+G + L +
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
M++ PD +Y+ L+ L G +V + +E+ R GF VD
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 7/255 (2%)
Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
G+ ++YT + +++ FC+ + A + + I+ G PN +TF+TL NG C EG +
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
+ L+ M + PD I+ +TL+NGL GK A+ + +MV +G + + +L
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
+C KS + A ++ KM ++ D Y I+I L K D A +L + +EM
Sbjct: 238 MC-KSGQTAL----AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF-NLFNEMEM 291
Query: 400 -GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
G IT+N +I C G+ D LL M + P+ ++ +LI + K +
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 459 ACALYGAALKQGVIP 473
A L+ + +G+ P
Sbjct: 352 AEELHKEMIHRGIAP 366
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 63 ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
AS + + D+F S+ G V +N ++ L A F + G AP+ WT
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
++I+IR + D ++ K+I+ + G+ + +T ++++ L GRLK++
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKSF 632
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 188 bits (478), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 197/416 (47%), Gaps = 41/416 (9%)
Query: 68 ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
E ++F + G + +S FN LL L + + K + G+ PN +T+++ I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
+ C + + A +++ C+ + G P+V T+ L+ LCK+ + +EA L +M G +
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
P+ TYN L+ G C G V+ A ++ + +G PD +TY +++DG C G +N A+ L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 248 LNEAIERGVTPNVV-----------------------------------TFNTLFNGYCK 272
NEA+ +G+ PNV+ TFN L NG CK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
G GL+K+M + PD +++ L++G K+ A+ I M+ G + D
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
NSLL GLC S ED + ++ M +K + T+ I++ +L + +K DEAL
Sbjct: 499 YNSLLNGLCKTSK-----FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT-SYDMLI 447
L P +TF +I C G +D A L M E K+ S T +Y+++I
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 180/351 (51%), Gaps = 4/351 (1%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
+ L+ L E A+ F+EA G+ PN ++ +I+ N+ EA ++ + M
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
+ G P V TF ILVN LCK G + +A ++ M G P+I T+N L+ G ++E
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
A E+L + ++G+ PDVYTY ++++G CK + + ME +E+G PN+ TFN L
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
C+ + +GLL+ MK ++ PD +++ TL++G K G + A ++F++M ++
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE-AYK 597
Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
V ++ + + ++ EK + A ++F++M + D TY +++ K +
Sbjct: 598 VSS---STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVN 654
Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
L +E G IP T VI LC E ++ +A ++ M + +P
Sbjct: 655 LGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 220/497 (44%), Gaps = 51/497 (10%)
Query: 23 IPQFNKL--VVFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIK--- 77
+ FNKL V+ + E L K R + F + L +R ++ +++
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 78 ---KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
+ G V +N+L+ L ++ + A + + + GL P+S+T++ +I YC
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
A +++ NG+ P+ T+ L++ LC G AL + ++ G KPN+ YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG--------------- 239
L+KGL G + EA ++ + GL P+V T+ +++G CK+G
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 240 --------------------RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
+ A+E+L+ ++ GV P+V T+N+L NG CK
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
+ K M ++ C P+ +++ LL L ++ K+ A+ + +EM D +L+ G
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 340 LCMKSWEEKDLLEDAYQVFEKMTK--KVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
C + L+ AY +F KM + KVS + P TY I+I + A +
Sbjct: 576 FC-----KNGDLDGAYTLFRKMEEAYKVSSSTP-TYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
+ P T+ ++ C G ++ L M E+ IPS T+ +I L ++ Y
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689
Query: 458 DACALYGAALKQGVIPQ 474
+A + +++G++P+
Sbjct: 690 EAAGIIHRMVQKGLVPE 706
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 198/442 (44%), Gaps = 30/442 (6%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
+ ++E +++F+ + +V +N ++ LV + A K + G+ P+ +
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
+F+I ++ +C + A ++++ M G NV + +V + E E+ +M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
G + T+N LL+ LC G V+E ++L V G+ P+++TY + G C+ G
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
+ A+ ++ IE+G P+V+T+N L G CK + L M PD +Y+TL
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-------------------- 341
+ G K G ++ A I + V GF D+ SL+ GLC
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 342 ----------MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
+K + ++ +A Q+ +M++K + + T+ I++ L K +A
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 392 HLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLD 451
+ I G+ P TFN +I + K++ AL +L +M ++ P +Y+ L+ L
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 452 QLEKSYDACALYGAALKQGVIP 473
+ K D Y +++G P
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAP 529
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 153/343 (44%), Gaps = 40/343 (11%)
Query: 167 KSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
+ G+++EA+ V ++M C+P + +YN ++ L G ++A+++ M +++ G+ PDVY
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV------------------------- 261
++T M FCK R + A+ LLN +G NVV
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 262 ----------TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
TFN L CK+G + LL + KR LP+ +Y+ + GL + G++
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
AV + ++ G + D N+L+ GLC S ++A KM + D
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK-----FQEAEVYLGKMVNEGLEPDSY 322
Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
TY +I KG A + A+ G +P T+ ++I LC EG+ ++AL L
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
P+ Y+ LI L +A L ++G+IP+
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 111/233 (47%), Gaps = 1/233 (0%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
++ ++I D + +G + V +N LL L ++ E ++ + G APN +TF+I
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI- 184
++ C EA +++ M + +P+ TF L++ CK+G L A + +M
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
+ TYN ++ V A ++ + + L PD YTY ++DGFCK G N
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKIS 297
+ L E +E G P++ T + N C E + G++ M ++ +P+ ++
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 115/246 (46%), Gaps = 8/246 (3%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K S ++ ++ + ++ + G ++ FN LL +L + + A+ E + + P++
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGY--HPNVTTFTILVNSLCKSGRLKEALEVLD 179
TF +I +C D A + M + Y + T+ I++++ + + A ++
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKM-EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQ 626
Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
+M P+ TY ++ G C G V Y+ L+ + +G P + T V++ C
Sbjct: 627 EMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVED 686
Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
R EA +++ +++G+ P V NT+ + KE K V L+ + K++C+ +Y
Sbjct: 687 RVYEAAGIIHRMVQKGLVPEAV--NTICDVDKKEVAAPKLV--LEDLLKKSCIT-YYAYE 741
Query: 300 TLLNGL 305
L +GL
Sbjct: 742 LLFDGL 747
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 188 bits (478), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 198/389 (50%), Gaps = 5/389 (1%)
Query: 71 DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
++F + + + +V +N L+ + A+ F + + G PN T++ +I Y
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
C + K++ M G PN+ ++ +++N LC+ GR+KE VL +M R G +
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
TYN L+KG C G +A M + GL P V TYT+++ CK G N AME L++
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
RG+ PN T+ TL +G+ ++G + +L+ M P ++Y+ L+NG GK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
+ A+++ ++M G D +++L G C +S++ +++A +V +M +K D
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC-RSYD----VDEALRVKREMVEKGIKPDT 485
Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
TY +I+ + ++T EA + +G P T+ +I A C EG ++KAL L
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
M E +P +Y +LI L++ ++ +A
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 200/383 (52%), Gaps = 26/383 (6%)
Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
+E + G + + T++ +I+ YC + +F +A + M +G P+V T+T L++S+CK
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
+G + A+E LDQM G PN +TY L+ G G + EAY +L + ++G P V T
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
Y A+++G C G+ +A+ +L + E+G++P+VV+++T+ +G+C+ + + + + M
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEE 347
++ PD I+YS+L+ G + + + A +++EM+R G DE +L+ CM E
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM----E 533
Query: 348 KDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
D LE A Q+ +M +K + D TY ++I L K +T EA L +P +T
Sbjct: 534 GD-LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 408 FNNVIQ---------------ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI---TK 449
++ +I+ C +G + +A + M P T+Y+++I +
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 450 LDQLEKSYDACALYGAALKQGVI 472
+ K+Y LY +K G +
Sbjct: 653 AGDIRKAY---TLYKEMVKSGFL 672
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 182/361 (50%), Gaps = 20/361 (5%)
Query: 78 KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
+ G SV + L+ ++ A++F + GL PN T++ ++ + K
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
EA +V+ M DNG+ P+V T+ L+N C +G++++A+ VL+ M G P++ +Y+ +L
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
G C V+EA + + G+KPD TY++++ GFC+ R+ EA +L E + G+
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR----- 312
P+ T+ L N YC EG K + L M ++ LPD ++YS L+NGL K + R
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 313 ----------PAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
P+ + ++ ++ + + SL++G CMK ++ +A QVFE M
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG-----MMTEADQVFESML 632
Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
K D Y I+I + +A ++ G + T+T +++AL EGK++
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692
Query: 423 K 423
+
Sbjct: 693 E 693
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 192/385 (49%), Gaps = 5/385 (1%)
Query: 70 IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
+ +FD ++ G +V +N L+ L + + K + GL PN +++++I
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
C + E V+ M GY + T+ L+ CK G +AL + +M R G P+
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
+ TY L+ +C G + A E L ++ GL P+ TYT ++DGF + G NEA +L
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
E + G +P+VVT+N L NG+C G + +L+ MK++ PD +SYST+L+G +
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
+ A+ + +EMV G + D +SL++G C E+ ++A ++E+M + D
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFC-----EQRRTKEACDLYEEMLRVGLPPD 519
Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
TY +I ++AL + +E G +P +T++ +I L + + +A LL
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 430 LMYEHAKIPSRTSYDMLITKLDQLE 454
++ +PS +Y LI +E
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIE 604
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 185/373 (49%), Gaps = 11/373 (2%)
Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
A F E ++PN +T++I+IR +C + A + D M G PNV T+ L++
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
CK ++ + ++L M G +PN+ +YN ++ GLC GR++E +L + G
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
D TY ++ G+CK G ++A+ + E + G+TP+V+T+ +L + CK G + + L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
M+ R P++ +Y+TL++G + G + A + +EM GF N+L+ G C+
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
+EDA V E M +K D +Y V+ + DEAL +E G P
Sbjct: 429 GK-----MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483
Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL---DQLEKSYDAC 460
TIT++++IQ C + + +A L M P +Y LI LEK A
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK---AL 540
Query: 461 ALYGAALKQGVIP 473
L+ +++GV+P
Sbjct: 541 QLHNEMVEKGVLP 553
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 175/391 (44%), Gaps = 59/391 (15%)
Query: 9 SFIFTNTNRRNHN-KIPQFNKLVV-------FAAASLSTAESLDLKENPRSLQAQRFVDR 60
SF+ T NRR ++ +N L+ F A + AE L P + +
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 61 I-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
+ KA + ++ D ++ G + + L+ A + E + G +P+
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
T++ +I +C +A V++ M + G P+V +++ +++ C+S + EAL V
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVG 239
+M G KP+ TY+ L++G C R +EA ++ + GL PD +TYTA+++ +C G
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 240 RSNEAMELLNEAIERGVTPNVVTFNTLFNG------------------------------ 269
+A++L NE +E+GV P+VVT++ L NG
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 594
Query: 270 --------------------YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
+C +G + + + M +N PD +Y+ +++G + G
Sbjct: 595 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
IR A +++KEMV+ GF + + +L++ L
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 6/268 (2%)
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS-NEA 244
C ++ ++K + +++A ++ + G P V +Y AV+D + R+ + A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
+ E +E V+PNV T+N L G+C G + L M+ + CLP+ ++Y+TL++G
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
K KI + + M G E + N ++ GLC + +++ V +M ++
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR-----MKEVSFVLTEMNRR 304
Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
D TY +I+ K +AL+ + G P IT+ ++I ++C G +++A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
+ L M P+ +Y L+ Q
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 130/308 (42%), Gaps = 50/308 (16%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ E + + +G + SV +N L+ + + E A+ + GL+P+ ++S
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ +C D EA +V M + G P+ T++ L+ C+ R KEA ++ ++M R+G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
P+ TY L+ C G +E+A ++ + G+ PDV TY+ +++G K R+ EA
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 246 ELL-----NEAIERGVT------------------------------------------- 257
LL E++ VT
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 258 --PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
P+ +N + +G+C+ G K L K M K L ++ L+ L K GK+
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695
Query: 316 SIFKEMVR 323
S+ ++R
Sbjct: 696 SVIVHVLR 703
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 67/137 (48%)
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
+I+ +C K EA +V + M + P+ T + I+++ C++G +++A + +M + G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
+ T L+K L G+V E ++++V + +++ + G + +
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 246 ELLNEAIERGVTPNVVT 262
++L E + G PN ++
Sbjct: 731 DVLAEMAKDGFLPNGIS 747
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 188 bits (477), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 203/406 (50%), Gaps = 6/406 (1%)
Query: 68 ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
E ++ + +D ++ +N ++ L E A ++ S+ GL P+ +T++ +I
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
YC + D A KV + M G N +T L++ LC + R+ EA+++ +M C
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320
Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
P ++TY L+K LC R EA ++ ++ G+KP+++TYT ++D C + +A EL
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 248 LNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLK 307
L + +E+G+ PNV+T+N L NGYCK G V +++LM+ R P+ +Y+ L+ G K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 308 WGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSV 367
+ A+ + +M+ D NSL+ G C + AY++ M + V
Sbjct: 441 -SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN-----FDSAYRLLSLMNDRGLV 494
Query: 368 TDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLL 427
D TY +I +L K K+ +EA + G P + + +I C GK+D+A L+
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 428 LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
L M +P+ +++ LI L K +A L +K G+ P
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 185/363 (50%), Gaps = 6/363 (1%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
+ L+M + ++A K F+E G N ++ +I C EA + M
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
D+ P V T+T+L+ SLC S R EAL ++ +M G KPNI TY L+ LC + E
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
+A E+L + GL P+V TY A+++G+CK G +A++++ R ++PN T+N L
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
GYCK K +G+L M +R LPD ++Y++L++G + G A + M G
Sbjct: 436 KGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
D+ S++ LC + +E+A +F+ + +K + Y +I K K D
Sbjct: 495 PDQWTYTSMIDSLC-----KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
EA + L + +P ++TFN +I LC +GK+ +A LL M + P+ ++ +LI
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 448 TKL 450
+L
Sbjct: 610 HRL 612
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 187/395 (47%), Gaps = 24/395 (6%)
Query: 71 DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
++ + + G +V +N L+ E AV S L+PN+ T++ +I+ Y
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
C K++ +A V++ M + P+V T+ L++ C+SG A +L M G P+
Sbjct: 439 C-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
TY ++ LC RVEEA ++ +++ G+ P+V YTA++DG+CK G+ +EA +L +
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
+ + PN +TFN L +G C +G + L + M K P + + L++ LLK G
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
A S F++M+ G + D + ++ C E LL DA + KM + D
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC----REGRLL-DAEDMMAKMRENGVSPDL 672
Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQ----------------- 413
TY +I+ G +T+ A L + G P TF ++I+
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 414 -ALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
A+ + D + LL M EH+ P+ SY+ LI
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 173/382 (45%), Gaps = 18/382 (4%)
Query: 85 VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
V +N L+ ++A + S + GL P+ WT++ MI C EA + D
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
+ G +PNV +T L++ CK+G++ EA +L++M C PN T+N L+ GLC G
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
+++EA + + GL+P V T T ++ K G + A + + G P+ T+
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
T YC+EG + ++ M++ PD +YS+L+ G G+ A + K M
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 325 GFEVDERMMNSLLRGLC-MKSWEEK----------DLLE--DAYQVFEKMTKKVSVTDPG 371
G E + SL++ L MK ++K +++E ++ EKM + +
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Query: 372 TYGIVIRTL---GKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
+Y +I + G + ++ H+ G P + FN ++ C K ++A ++
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQR--NEGISPSELVFNALLSCCCKLKKHNEAAKVV 819
Query: 429 FLMYEHAKIPSRTSYDMLITKL 450
M +P S +LI L
Sbjct: 820 DDMICVGHLPQLESCKVLICGL 841
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 162/357 (45%), Gaps = 31/357 (8%)
Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
F+ Y + + L+NSL + G + E +V +M PNI TYN ++ G C +G V
Sbjct: 175 FELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNV 234
Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
EEA + + + GL PD +TYT+++ G+C+ + A ++ NE +G N V + L
Sbjct: 235 EEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHL 294
Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
+G C + + L MK C P +Y+ L+ L + A+++ KEM G
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 327 EVDERMMNSLLRGLC------------------------------MKSWEEKDLLEDAYQ 356
+ + L+ LC + + ++ ++EDA
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
V E M + + TY +I+ K +A+ L+ +E +P +T+N++I C
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
G D A LL LM + +P + +Y +I L + ++ +AC L+ + ++GV P
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 183/406 (45%), Gaps = 26/406 (6%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K+ ++E D+FDS+++ G N +V + L+ + + A + S PNS
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TF+ +I C EA + + M G P V+T TIL++ L K G A QM
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
G KP+ TY ++ C GR+ +A +M+ ++ +G+ PD++TY++++ G+ +G++
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLF-----------NGYCKEGTPMKG-------VGLL 283
N A ++L + G P+ TF +L G E M V LL
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR-FGFEVDERMMNSLLRGLC- 341
+ M + + P+ SY L+ G+ + G +R A +F M R G E + N+LL C
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
+K E A +V + M + + ++I L K + + + ++ G+
Sbjct: 809 LKKHNE------AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
+ + +I + +G ++ L +M ++ S +Y +LI
Sbjct: 863 YEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 146/346 (42%), Gaps = 55/346 (15%)
Query: 49 PRSLQAQRFVDRIKA-SPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKF 107
P SL + + A LKE + + + K G +VS L+ L+ + + A
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 108 FSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK 167
F + S G P++ T++ I+ YC + +A ++ M +NG P++ T++ L+
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 168 SGRLKEALEVLDQMGRIGCKP--------------------------------------- 188
G+ A +VL +M GC+P
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 189 --------------NIQTYNCLLKGLCYVGRVEEAYEMLMNV-KNDGLKPDVYTYTAVMD 233
N ++Y L+ G+C VG + A ++ ++ +N+G+ P + A++
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
CK+ + NEA +++++ I G P + + L G K+G +G + + + +
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYE 864
Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
D++++ +++G+ K G + +F M + G + + + L+ G
Sbjct: 865 DELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 205/429 (47%), Gaps = 43/429 (10%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
L + + +F + K S+ +F+ LL A+ +N+ + + + + G+ N +T+SI
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM---- 181
+I C+C ++ A V+ M GY PN+ T + L+N C S R+ EA+ ++DQM
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 182 ----------------------------GRI---GCKPNIQTYNCLLKGLCYVGRVEEAY 210
R+ GC+P++ TY ++ GLC G + A+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
+L ++ L+P V Y ++DG CK ++A+ L E +G+ PNVVT+++L +
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
C G LL M +R PD ++S L++ +K GK+ A ++ EMV+ +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
+SL+ G CM D L++A Q+FE M K D TY +I+ K K+ +E +
Sbjct: 362 VTYSSLINGFCM-----HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
+ G + T+T+N +IQ L G D A + M P+ +Y+ L+ L
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 451 ---DQLEKS 456
+LEK+
Sbjct: 477 CKNGKLEKA 485
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 204/412 (49%), Gaps = 5/412 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
+ S L + + + K G ++ + LL AV + G PN+
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TF+ +I N EA +ID M G P++ T+ ++VN LCK G A +L++M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
+ +P + YN ++ GLC +++A + ++ G++P+V TY++++ C GR
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
++A LL++ IER + P+V TF+ L + + KEG ++ L M KR+ P ++YS+L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
+NG ++ A +F+ MV D N+L++G C + +E+ +VF +M
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC-----KYKRVEEGMEVFREM 422
Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
+++ V + TY I+I+ L + D A + G P +T+N ++ LC GK+
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
+KA+++ + P+ +Y+++I + + K D L+ +GV P
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 203/408 (49%), Gaps = 5/408 (1%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ E + + D + G + FN L+ L + N+ A+ + G P+ T+ +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ C + D A +++ M P V + +++ LCK + +AL + +M G
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
+PN+ TY+ L+ LC GR +A +L ++ + PDV+T++A++D F K G+ EA
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
+L +E ++R + P++VT+++L NG+C + + + M ++C PD ++Y+TL+ G
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
K+ ++ + +F+EM + G + N L++GL ++ D + A ++F++M
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL----FQAGD-CDMAQEIFKEMVSDG 461
Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
+ TY ++ L K K ++A++ + P T+N +I+ +C GK++
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
L + P +Y+ +I+ + +A AL+ + G +P
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 167/332 (50%), Gaps = 5/332 (1%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
+N ++ L + A+ F E + G+ PN T+S +I C CN + +A +++ M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
+ +P+V TF+ L+++ K G+L EA ++ D+M + P+I TY+ L+ G C R++
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
EA +M + + PDV TY ++ GFCK R E ME+ E +RG+ N VT+N L
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
G + G + K M P+ ++Y+TLL+GL K GK+ A+ +F+ + R E
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
N ++ G+C + +ED + +F ++ K D Y +I + +
Sbjct: 499 PTIYTYNIMIEGMC-----KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
EA E G +P + +N +I+A +G
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 183/385 (47%), Gaps = 13/385 (3%)
Query: 46 KENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA 104
K P L +D + K + + +++F ++ G +V ++ L+ L A
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 105 VKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNS 164
+ S+ + P+ +TFS +I + + EA K+ D M P++ T++ L+N
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 165 LCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPD 224
C RL EA ++ + M C P++ TYN L+KG C RVEE E+ + GL +
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 225 VYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK 284
TY ++ G + G + A E+ E + GV PN++T+NTL +G CK G K + + +
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 285 LMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK- 343
+++ P +Y+ ++ G+ K GK+ +F + G + D N+++ G C K
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT-LGKGKKTDEA-LIHLHHAIEMGH 401
S EE D L F++M + ++ + G Y +IR L G + A LI +
Sbjct: 551 SKEEADAL------FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAG 604
Query: 402 IPRTITFNNVIQALCGEGKIDKALL 426
TI ++ + +G++DK+ L
Sbjct: 605 DASTI---GLVTNMLHDGRLDKSFL 626
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 1/299 (0%)
Query: 32 FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
++ AS ++ ++ K NP +D +K L E ++D + K + S+ ++
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 91 LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
L+ M + + A + F S P+ T++ +I+ +C E +V M G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
N T+ IL+ L ++G A E+ +M G PNI TYN LL GLC G++E+A
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
+ ++ ++P +YTY +++G CK G+ + +L +GV P+VV +NT+ +G+
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
C++G+ + L K MK+ LP+ Y+TL+ L+ G + + KEM GF D
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 147/307 (47%), Gaps = 9/307 (2%)
Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
+L +A+ + +M + P+I ++ LL + + + + + ++N G+ + YTY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
+++ FC+ + A+ +L + ++ G PN+VT ++L NGYC + V L+ M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
P+ ++++TL++GL K A+++ MV G + D ++ GLC + + D
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG--DTD 238
Query: 350 LLEDAYQVFEKMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTIT 407
L A+ + KM + +PG Y +I L K K D+AL G P +T
Sbjct: 239 L---AFNLLNKMEQ--GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
++++I LC G+ A LL M E P ++ LI + K +A LY +
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 468 KQGVIPQ 474
K+ + P
Sbjct: 354 KRSIDPS 360
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 195/378 (51%), Gaps = 8/378 (2%)
Query: 84 SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
S+ DF+ A+ + + F + G+A N +T +IMI C+C A V+
Sbjct: 87 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
+ GY P+ TTF L+ L G++ EA+ ++D+M GC+P++ TYN ++ G+C
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
G A ++L ++ +K DV+TY+ ++D C+ G + A+ L E +G+ +VVT+
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
N+L G CK G G LLK M R +P+ I+++ LL+ +K GK++ A ++KEM+
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
G + N+L+ G CM++ L +A + + M + D T+ +I+
Sbjct: 327 RGISPNIITYNTLMDGYCMQNR-----LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
K+ D+ + + + G + +T++ ++Q C GKI A L M H +P +Y
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 444 DMLITKL---DQLEKSYD 458
+L+ L +LEK+ +
Sbjct: 442 GILLDGLCDNGKLEKALE 459
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 182/384 (47%), Gaps = 9/384 (2%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ E + + D + ++G V +N ++ + + A+ + + + +T+S
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
+I C A + M G +V T+ LV LCK+G+ + +L M
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
PN+ T+N LL G+++EA E+ + G+ P++ TY +MDG+C R +EA
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
+L+ + +P++VTF +L GYC G+ + + + KR + + ++YS L+ G
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
+ GKI+ A +F+EMV G D LL GLC + LE A ++FE + K
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC-----DNGKLEKALEIFEDLQK-- 466
Query: 366 SVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
S D G Y +I + KG K ++A G P +T+ +I LC +G + +
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Query: 424 ALLLLFLMYEHAKIPSRTSYDMLI 447
A +LL M E P+ +Y+ LI
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLI 550
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 193/413 (46%), Gaps = 16/413 (3%)
Query: 23 IPQFNKLVVFAAASLSTAESLDL--KENPRSLQAQRF-----VDRI-KASPLKERIDIFD 74
+ +N +V S T+ +LDL K R+++A F +D + + + I +F
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252
Query: 75 SIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKN 134
++ G SV +N L+ L + + S + PN TF++++ + +
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312
Query: 135 DFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYN 194
EA ++ M G PN+ T+ L++ C RL EA +LD M R C P+I T+
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER 254
L+KG C V RV++ ++ N+ GL + TY+ ++ GFC+ G+ A EL E +
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432
Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
GV P+V+T+ L +G C G K + + + ++K + Y+T++ G+ K GK+ A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
++F + G + + ++ GLC +K L +A + KM + + + TY
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLC-----KKGSLSEANILLRKMEEDGNAPNDCTYN 547
Query: 375 IVIRT-LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
+IR L G T A + + G + VI L G++DK+ L
Sbjct: 548 TLIRAHLRDGDLTASAKL-IEEMKSCGFSADASSIKMVIDMLL-SGELDKSFL 598
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 5/251 (1%)
Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
P + ++ + + N ++ + G+ N+ T N + N +C+ +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
L + K PD +++TL+ GL GK+ AV + MV G + D NS++ G+C
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC- 204
Query: 343 KSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI 402
+S + A + KM ++ D TY +I +L + D A+ G
Sbjct: 205 RSGDT----SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260
Query: 403 PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACAL 462
+T+N++++ LC GK + LLL M +P+ ++++L+ + K +A L
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 463 YGAALKQGVIP 473
Y + +G+ P
Sbjct: 321 YKEMITRGISP 331
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 201/404 (49%), Gaps = 16/404 (3%)
Query: 36 SLSTAESLDL-------KENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSD 87
SL E+LDL + P + + ++ I K I++ D ++ G + +
Sbjct: 50 SLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
N L+ ++ A F + G P+ TF+ +I +C N EA +++ M
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
+ G P+V +T +++SLCK+G + AL + DQM G +P++ Y L+ GLC GR
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
+A +L + +KPDV T+ A++D F K G+ +A EL NE I + PN+ T+ +L
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
NG+C EG + + LM+ + C PD ++Y++L+NG K K+ A+ IF EM + G
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
+ +L++G + + A +VF M + + TY +++ L K
Sbjct: 350 GNTITYTTLIQG-----FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 388 EALIHLH--HAIEM-GHIPRTITFNNVIQALCGEGKIDKALLLL 428
+AL+ EM G P T+N ++ LC GK++KAL++
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 215/432 (49%), Gaps = 13/432 (3%)
Query: 33 AAASLSTAESLDLKENPRSLQAQRFVDR--IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
+ +LS + LDL R+ R + R + + E +D+F + + S+ DF
Sbjct: 18 SGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTK 77
Query: 91 LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
LL + + + + + G++ + +T ++++ C+C + + A + M G
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137
Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
+ P++ TFT L+N C R++EA+ +++QM +G KP++ Y ++ LC G V A
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
+ ++N G++PDV YT++++G C GR +A LL +R + P+V+TFN L + +
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
KEG + L M + + P+ +Y++L+NG G + A +F M G D
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
SL+ G C + ++DA ++F +M++K + TY +I+ G+ K + A
Sbjct: 318 VAYTSLINGFC-----KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH---AKIPSRTSYDMLI 447
H + G P T+N ++ LC GK+ KAL++ M + P+ +Y++L+
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 448 TKL---DQLEKS 456
L +LEK+
Sbjct: 433 HGLCYNGKLEKA 444
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 146/280 (52%), Gaps = 8/280 (2%)
Query: 85 VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
V FN L+ A V + A + ++E +APN +T++ +I +C + EAR++
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
M G P+V +T L+N CK ++ +A+++ +M + G N TY L++G VG
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER---GVTPNVV 261
+ A E+ ++ + G+ P++ TY ++ C G+ +A+ + + +R GV PN+
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
T+N L +G C G K + + + M+KR I+Y+ ++ G+ K GK++ AV++F +
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486
Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
G + + +++ GL + L +A+ +F KM
Sbjct: 487 PSKGVKPNVVTYTTMISGLF-----REGLKHEAHVLFRKM 521
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 118/224 (52%), Gaps = 3/224 (1%)
Query: 68 ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
E +F ++ G V + L+ + + A+K F E S GL N+ T++ +I
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI--- 184
+ + A++V M G PN+ T+ +L++ LC +G++K+AL + + M +
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
G PNI TYN LL GLCY G++E+A + +++ + + TYT ++ G CK G+ A
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKK 288
+ L +GV PNVVT+ T+ +G +EG + L + MK+
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 204/413 (49%), Gaps = 5/413 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
+ S L + + + K G + N LL N AV + G P+S+
Sbjct: 128 RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TF+ +I N EA ++D M G P++ T+ I+VN LCK G + AL +L +M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
+ +P + YN ++ LC V +A + + N G++P+V TY +++ C GR
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
++A LL++ IER + PNVVTF+ L + + KEG ++ L M KR+ PD +YS+L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
+NG ++ A +F+ M+ + N+L++G C + +++ ++F +M
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC-----KAKRVDEGMELFREM 422
Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
+++ V + TY +I + ++ D A I + G +P +T++ ++ LC GK+
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
+ AL++ + P +Y+++I + + K D L+ + +GV P
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 200/428 (46%), Gaps = 40/428 (9%)
Query: 58 VDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLA 117
++R+ L + +++F + K S+ +F+ LL A+ +N+ + + + + G++
Sbjct: 54 INRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 113
Query: 118 PNSWTFSIMIRCYCNK-----------------------------NDFFEARKVIDC--- 145
N +T+SI+I C+C + N F ++ D
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 146 ---MFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
M + GY P+ TF L++ L + R EA+ ++D+M GC+P++ TY ++ GLC
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
G ++ A +L ++ ++P V Y ++D C N+A+ L E +G+ PNVVT
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
+N+L C G LL M +R P+ +++S L++ +K GK+ A ++ EM+
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 323 RFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGK 382
+ + D +SL+ G CM D L++A +FE M K + TY +I+ K
Sbjct: 354 KRSIDPDIFTYSSLINGFCM-----HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 383 GKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
K+ DE + + G + T+T+ +I + D A ++ M +P +
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 443 YDMLITKL 450
Y +L+ L
Sbjct: 469 YSILLDGL 476
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 170/363 (46%), Gaps = 10/363 (2%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ + +++F + G +V +N L+ L A + S+ + PN TFS
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
+I + + EA K+ D M P++ T++ L+N C RL EA + + M
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
C PN+ TYN L+KG C RV+E E+ + GL + TYT ++ GF + + A
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
+ + + GV P+++T++ L +G C G + + + +++ PD +Y+ ++ G+
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
K GK+ +F + G + + +++ G C K L E+A +F +M ++
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC-----RKGLKEEADALFREMKEEG 566
Query: 366 SVTDPGTYGIVIRT-LGKGKKTDEA-LIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDK 423
+ D GTY +IR L G K A LI + TI ++ + +G++DK
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI---GLVTNMLHDGRLDK 623
Query: 424 ALL 426
+ L
Sbjct: 624 SFL 626
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 143/291 (49%), Gaps = 1/291 (0%)
Query: 32 FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
++ AS ++ ++ K NP + +D +K L E ++D + K + + ++
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 91 LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
L+ M + + A F S PN T++ +I+ +C E ++ M G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
N T+T L++ ++ A V QM G P+I TY+ LL GLC G+VE A
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
+ ++ ++PD+YTY +++G CK G+ + +L +GV PNVVT+ T+ +G+
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
C++G + L + MK+ LPD +Y+TL+ L+ G + + +EM
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
KA +++ D+F S+ G +V + ++ +E A F E G P+S
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
T++ +IR + D + ++I M + + +T ++ N L GRL ++
Sbjct: 573 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML-HDGRLDKSF 625
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 185 bits (470), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 227/494 (45%), Gaps = 78/494 (15%)
Query: 50 RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
R + R D IK + + +D+F + K S+ +FN LL A+ +N+ E +
Sbjct: 51 REILRNRLSDIIK---VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGE 107
Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
+ + G++ + +T+SI I C+C ++ A V+ M GY P++ T + L+N C S
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK 167
Query: 170 RLK-----------------------------------EALEVLDQMGRIGCKPNIQTY- 193
R+ EA+ ++DQM + GC+P++ TY
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 194 ----------------------------------NCLLKGLCYVGRVEEAYEMLMNVKND 219
N ++ GLC +++A + + N
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
G++PDV+TY++++ C GR ++A LL++ IER + PNVVTF+ L + + KEG ++
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
L M KR+ PD +YS+L+NG ++ A +F+ M+ + ++L++G
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
C + +E+ ++F +M+++ V + TY +I + + D A + + +
Sbjct: 408 FC-----KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 462
Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
G P +T+N ++ LC GK+ KA+++ + P +Y+++I + + K D
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 460 CALYGAALKQGVIP 473
L+ +GV P
Sbjct: 523 WELFCNLSLKGVSP 536
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 184/394 (46%), Gaps = 45/394 (11%)
Query: 70 IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
+ + ++K V +N ++ L + A+ F+E + G+ P+ +T+S +I C
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
CN + +A +++ M + +PNV TF+ L+++ K G+L EA ++ D+M + P+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
I TY+ L+ G C R++EA M + + P+V TY+ ++ GFCK R E MEL
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 250 EAIERG-----------------------------------VTPNVVTFNTLFNGYCKEG 274
E +RG V PN++T+N L +G CK G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
K + + + +++ PD +Y+ ++ G+ K GK+ +F + G + N
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRT-LGKGKKTDEA-LIH 392
+++ G C K + E+A + +KM + + + GTY +IR L G + A LI
Sbjct: 543 TMISGFCRKGSK-----EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
+ TI ++ + +G++DK+ L
Sbjct: 598 EMRSCGFAGDASTI---GLVTNMLHDGRLDKSFL 628
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 184/417 (44%), Gaps = 40/417 (9%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ + + + D + + G F L+ L + N+ AV + G P+ T+
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ C + D A ++ M +V + +++ LCK + +AL + +M G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMN--------------------VKNDGL---- 221
+P++ TY+ L+ LC GR +A +L + VK L
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 222 -----------KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
PD++TY+++++GFC R +EA + I + PNVVT++TL G+
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
CK +G+ L + M +R + + ++Y+TL++G + A +FK+MV G +
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
N LL GLC + L A VFE + + D TY I+I + K K ++
Sbjct: 469 LTYNILLDGLC-----KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
+ G P I +N +I C +G ++A LL M E +P+ +Y+ LI
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 150/299 (50%), Gaps = 1/299 (0%)
Query: 32 FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
++ AS ++ ++ K NP + +D +K L E ++D + K + + ++
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 91 LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
L+ M + + A F S PN T+S +I+ +C E ++ M G
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
N T+T L++ ++ A V QM +G PNI TYN LL GLC G++ +A
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
+ ++ ++PD+YTY +++G CK G+ + EL +GV+PNV+ +NT+ +G+
Sbjct: 489 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
C++G+ + LLK MK+ LP+ +Y+TL+ L+ G + + KEM GF D
Sbjct: 549 CRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
KA +++ ++F ++ G + +V +N ++ +E A + G PNS
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
T++ +IR D + ++I M G+ + +T ++ N L GRL ++
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSF 627
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 202/390 (51%), Gaps = 5/390 (1%)
Query: 84 SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
S+ DF +L + +N+ + + + + + G++ + ++F+I+I C+C + A ++
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 144 DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYV 203
M G+ P++ T L+N C+ R +EA+ ++D M G PN+ YN ++ GLC
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 204 GRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTF 263
+ A E+ ++ G++ D TY ++ G GR +A LL + ++R + PNV+ F
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
L + + KEG ++ L K M +R+ +P+ +Y++L+NG G + A +F MV
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
G D N+L+ G C + +ED ++F +MT + V D TY +I +
Sbjct: 318 KGCFPDVVTYNTLITGFC-----KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
K + A + ++ G P +T+N ++ LC GKI+KAL+++ + + +Y
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432
Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
+++I L + +K +A L+ + ++GV P
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 150/306 (49%), Gaps = 6/306 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K L +++F ++K G +N L+ L A + + + PN
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
F+ +I + + + EAR + M PNV T+ L+N C G L +A + D M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
GC P++ TYN L+ G C RVE+ ++ + GL D +TY ++ G+C+ G+
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
N A ++ N ++ GV+P++VT+N L + C G K + +++ ++K D I+Y+ +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE-EKDLL-----EDAY 355
+ GL + K++ A +F+ + R G + D +++ GLC K + E D L ED +
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495
Query: 356 QVFEKM 361
E++
Sbjct: 496 MPSERI 501
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 120/235 (51%)
Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
A + E + PN +T++ +I +C +A+ + D M G P+V T+ L+
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332
Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
CKS R+++ +++ +M G + TYN L+ G C G++ A ++ + + G+ P
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
D+ TY ++D C G+ +A+ ++ + + + +++T+N + G C+ + L
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLR 338
+ + ++ PD I+Y T+++GL + G R A + + M GF ER+ + LR
Sbjct: 453 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 114/242 (47%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
+K L E +++ + + +V +N L+ + A F S G P+
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
T++ +I +C + K+ M G + T+ L++ C++G+L A +V ++
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M G P+I TYN LL LC G++E+A M+ +++ + D+ TY ++ G C+ +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
EA L +GV P+ + + T+ +G C++G + L + MK+ +P + Y
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504
Query: 301 LL 302
L
Sbjct: 505 TL 506
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 7/270 (2%)
Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
+ ++A+ + + P + +T V+ K+ + + + L ++ G++ ++ +F
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
L + +C+ + LL M K P ++ +LLNG + + + AVS+ M F
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG-KG 383
GF + + N+++ GLC + +D L +A +VF M KK D TY +I L G
Sbjct: 179 GFVPNVVIYNTVINGLC----KNRD-LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
+ TD A + L ++ P I F +I EG + +A L M + +P+ +Y
Sbjct: 234 RWTDAARL-LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
+ LI DA ++ + +G P
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 220/478 (46%), Gaps = 75/478 (15%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
L E +D+F + K S+ +F+ LL A+ + + + + F + G++ N +T++I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 126 MIRC-----------------------------------YCNKNDFFEARKVIDCMFDNG 150
MI C +C+ N EA ++D M + G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG------ 204
Y P+ TFT LV+ L + + EA+ ++++M GC+P++ TY ++ GLC G
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 205 -----------------------------RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
V++A + + N G++PDV+TY++++
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
C GR ++A LL++ +ER + PNVVTFN+L + + KEG ++ L M +R+ P+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
++Y++L+NG ++ A IF MV D N+L+ G C + + D
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC-----KAKKVVDGM 400
Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
++F M+++ V + TY +I + D A + + G P +T+N ++ L
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
C GK++KA+++ + + P +Y+++ + + K D L+ + +GV P
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 182/355 (51%), Gaps = 7/355 (1%)
Query: 70 IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
+++ + ++K V ++ ++ +L + A+ F+E + G+ P+ +T+S +I C
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
CN + +A +++ M + +PNV TF L+++ K G+L EA ++ D+M + PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
I TYN L+ G C R++EA ++ + + PDV TY +++GFCK + + MEL
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
+ RG+ N VT+ TL +G+ + + K M P+ ++Y+TLL+GL K G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
K+ A+ +F+ + + E D N + G+C + +ED + +F ++ K D
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC-----KAGKVEDGWDLFCSLSLKGVKPD 519
Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
Y +I K +EA E G +P + T+N +I+A +G DKA
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG--DKA 572
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 145/299 (48%), Gaps = 1/299 (0%)
Query: 32 FAAASLSTAESLDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFND 90
++ AS ++ L+ K NP + +D K L E +FD + + + ++ +N
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 91 LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
L+ M + + A + F+ S P+ T++ +I +C + ++ M G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
N T+T L++ ++ A V QM G PNI TYN LL GLC G++E+A
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
+ ++ ++PD+YTY + +G CK G+ + +L +GV P+V+ +NT+ +G+
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
CK+G + L MK+ LPD +Y+TL+ L+ G + + KEM F D
Sbjct: 531 CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 149/304 (49%), Gaps = 5/304 (1%)
Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
+L EA+++ +M + P+I ++ LL + + + + ++ G+ ++YTY
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
+++ C+ + + A+ +L + ++ G P++VT N+L NG+C + V L+ M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
PD ++++TL++GL + K AV++ + MV G + D +++ GLC + E D
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG--EPD 222
Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
L A + KM K D Y VI +L K + D+AL G P T++
Sbjct: 223 L---ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
++I LC G+ A LL M E P+ +++ LI + K +A L+ +++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 470 GVIP 473
+ P
Sbjct: 340 SIDP 343
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
KA +++ D+F S+ G V +N ++ +E A F + G P+S
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL-KEALEVL 178
T++ +IR + D + ++I M + + +T+ LV + GRL K LEVL
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKGFLEVL 613
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 211/424 (49%), Gaps = 5/424 (1%)
Query: 50 RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
RS +R + + + + +F + + S+ DF+ LL+A+ LN+ E + F
Sbjct: 44 RSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFR 103
Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
G++ + ++F+ +I C+C A + M G+ P++ TF LVN C
Sbjct: 104 HLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVN 163
Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
R EA+ ++DQ+ +G +PN+ YN ++ LC G+V A ++L ++K G++PDV TY
Sbjct: 164 RFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYN 223
Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
+++ G + +L++ + G++P+V+TF+ L + Y KEG ++ M +R
Sbjct: 224 SLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQR 283
Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
+ P+ ++Y++L+NGL G + A + +V GF + N+L+ G C +
Sbjct: 284 SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC-----KAK 338
Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
++D ++ M++ D TY + + + K A L + G P TFN
Sbjct: 339 RVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFN 398
Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
++ LC GKI KAL+ L + + + +Y+++I L + +K DA L+ + +
Sbjct: 399 ILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALK 458
Query: 470 GVIP 473
GV P
Sbjct: 459 GVSP 462
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K L E ++ + + N ++ +N L+ L + + A K + S G PN+
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T++ +I YC + K++ M +G + T+ L C++G+ A +VL +M
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
G P++ T+N LL GLC G++ +A L +++ + TY ++ G CK +
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNG 269
+A L +GV+P+V+T+ T+ G
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIG 473
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 182 bits (461), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 209/408 (51%), Gaps = 8/408 (1%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
L+E ID+F + + S+ DF+ +L + + + F G+ + ++++I
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
+I C C + F A V+ M GY P+V T + L+N C+ R+ +A++++ +M +G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
+P++ YN ++ G C +G V +A E+ ++ DG++ D TY +++ G C GR ++A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
L+ + + R + PNV+TF + + + KEG + + L + M +R PD +Y++L+NGL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
G++ A + MV G D N+L+ G C + +++ ++F +M ++
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC-----KSKRVDEGTKLFREMAQRG 344
Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
V D TY +I+ + + D A M P T++ ++ LC +++KAL
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSR---MDSRPNIRTYSILLYGLCMNWRVEKAL 401
Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
+L M + T+Y+++I + ++ DA L+ + +G+ P
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 4/296 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K + + +++FD +++DG +N L+ L A + + + PN
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TF+ +I + + F EA K+ + M P+V T+ L+N LC GR+ EA ++LD M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
GC P++ TYN L+ G C RV+E ++ + GL D TY ++ G+ + GR
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
+ A E+ + R PN+ T++ L G C K + L + M+K D +Y+ +
Sbjct: 366 DAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKDLLEDAYQ 356
++G+ K G + A +F+ + G + D +++ G C K W++ DLL Q
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 146/306 (47%), Gaps = 7/306 (2%)
Query: 168 SGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYT 227
S L+E +++ +M + P+I ++ +L + + + +++ G+ D+Y+
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 228 YTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK 287
Y V++ C+ R A+ ++ + ++ G P+VVT ++L NG+C+ + L+ M+
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 288 KRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WE 346
+ PD + Y+T+++G K G + AV +F M R G D NSL+ GLC W
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW- 225
Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
DA ++ M + V + T+ VI K K EA+ P
Sbjct: 226 -----SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAA 466
T+N++I LC G++D+A +L LM +P +Y+ LI + ++ + L+
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 467 LKQGVI 472
++G++
Sbjct: 341 AQRGLV 346
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
+K E + +++ + + + V +N L+ L M + A + + G P+
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
T++ +I +C E K+ M G + T+ ++ ++GR A E+ +
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M +PNI+TY+ LL GLC RVE+A + N++ ++ D+ TY V+ G CK+G
Sbjct: 375 MDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
+A +L +G+ P+VV++ T+ +G+C++ K L + M++ LP
Sbjct: 432 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 163/305 (53%), Gaps = 5/305 (1%)
Query: 85 VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
V + ++ + + A K F E GL P+S TF+ +I YC +A +V +
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
M G PNV T+T L++ LCK G L A E+L +M +IG +PNI TYN ++ GLC G
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
+EEA +++ + GL D TYT +MD +CK G ++A E+L E + +G+ P +VTFN
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
L NG+C G G LL M + P+ ++++L+ ++ A +I+K+M
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
G D + +L++G C + +++A+ +F++M K TY ++I+ K K
Sbjct: 626 GVGPDGKTYENLVKGHC-----KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 385 KTDEA 389
K EA
Sbjct: 681 KFLEA 685
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 189/407 (46%), Gaps = 5/407 (1%)
Query: 70 IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
I +F + G W+V+ +N ++ + L + A G P+ ++S ++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
YC + + K+I+ M G PN + ++ LC+ +L EA E +M R G P+
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
Y L+ G C G + A + + + + PDV TYTA++ GFC++G EA +L +
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
E +G+ P+ VTF L NGYCK G + M + C P+ ++Y+TL++GL K G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
+ A + EM + G + + NS++ GLC + +E+A ++ + D
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLC-----KSGNIEEAVKLVGEFEAAGLNAD 525
Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
TY ++ K + D+A L + G P +TFN ++ C G ++ LL
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 430 LMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
M P+ T+++ L+ + A A+Y +GV P K
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 193/409 (47%), Gaps = 6/409 (1%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVM-LNEQETAVKFFSEASSYGLAPNSWTFS 124
L+E +F+ + G SV N L L + TA+ F E G+ N +++
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 125 IMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI 184
I+I C EA ++ M GY P+V +++ +VN C+ G L + ++++ M R
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 185 GCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEA 244
G KPN Y ++ LC + ++ EA E + G+ PD YT ++DGFCK G A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
+ E R +TP+V+T+ + +G+C+ G ++ L M + PD ++++ L+NG
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
K G ++ A + M++ G + +L+ GLC +E D L+ A ++ +M K
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC----KEGD-LDSANELLHEMWKI 485
Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
+ TY ++ L K +EA+ + G T+T+ ++ A C G++DKA
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
+L M P+ ++++L+ D L L +G+ P
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 133/273 (48%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
KA +K+ + + + + G + +V + L+ L + ++A + E GL PN +
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T++ ++ C + EA K++ G + + T+T L+++ CKSG + +A E+L +M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
G +P I T+N L+ G C G +E+ ++L + G+ P+ T+ +++ +C
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
A + + RGV P+ T+ L G+CK + L + MK + +YS L
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
+ G LK K A +F +M R G D+ + +
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K+ + + +I + G ++ FN L+ + E K + + G+APN+
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TF+ +++ YC +N+ A + M G P+ T+ LV CK+ +KEA + +M
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
G ++ TY+ L+KG + EA E+ ++ +GL D + D K R
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRP 717
Query: 242 NEAMELLNEAIE 253
+ ++ ++E IE
Sbjct: 718 DTIVDPIDEIIE 729
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 205/415 (49%), Gaps = 8/415 (1%)
Query: 37 LSTAESLDLKENPRSLQ-AQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMAL 95
L E+L LK N + R + R A + E +I + +G V + L+ AL
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGR--AGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 96 VMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNV 155
+ + A + F + + P+ T+ ++ + + D ++ M +G+ P+V
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363
Query: 156 TTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN 215
TFTILV++LCK+G EA + LD M G PN+ TYN L+ GL V R+++A E+ N
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 216 VKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGT 275
+++ G+KP YTY +D + K G S A+E + +G+ PN+V N K G
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 276 PMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNS 335
+ + +K +PD ++Y+ ++ K G+I A+ + EM+ G E D ++NS
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 336 LLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH 395
L+ L + D +++A+++F +M + TY ++ LGK K EA+
Sbjct: 544 LINTL-----YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 396 AIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
++ G P TITFN + LC ++ AL +LF M + +P +Y+ +I L
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 147/305 (48%), Gaps = 7/305 (2%)
Query: 71 DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
D+F +K G V+ +N LL A + + + + E S++ N+ T +I+I
Sbjct: 806 DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL 865
Query: 131 CNKNDFFEARKVI-DCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
+ +A + D M D + P T+ L++ L KSGRL EA ++ + M GC+PN
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925
Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
YN L+ G G + A + + +G++PD+ TY+ ++D C VGR +E +
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985
Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMK-KRNCLPDKISYSTLLNGLLKW 308
E E G+ P+VV +N + NG K + + L MK R PD +Y++L+ L
Sbjct: 986 ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA 1045
Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
G + A I+ E+ R G E + N+L+RG + E AY V++ M
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH-----AYAVYQTMVTGGFSP 1100
Query: 369 DPGTY 373
+ GTY
Sbjct: 1101 NTGTY 1105
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 184/417 (44%), Gaps = 30/417 (7%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
+N L+ L+ A++ + G P+ T+S ++ + D ++ M
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
G PNV TFTI + L ++G++ EA E+L +M GC P++ TY L+ LC +++
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
A E+ +K KPD TY ++D F + + +E + G P+VVTF L
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG-- 325
+ CK G + L +M+ + LP+ +Y+TL+ GLL+ ++ A+ +F M G
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430
Query: 326 ----------------------FEVDERMM------NSLLRGLCMKSWEEKDLLEDAYQV 357
E E+M N + + S + +A Q+
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
F + V D TY ++++ K + DEA+ L +E G P I N++I L
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550
Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
++D+A + M E P+ +Y+ L+ L + K +A L+ +++G P
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 178/365 (48%), Gaps = 7/365 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
KA E D D ++ G ++ +N L+ L+ ++ + A++ F S G+ P ++
Sbjct: 375 KAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T+ + I Y D A + + M G PN+ + SL K+GR +EA ++ +
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
IG P+ TYN ++K VG ++EA ++L + +G +PDV ++++ K R
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
+EA ++ E + P VVT+NTL G K G + + L + M ++ C P+ I+++TL
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
+ L K ++ A+ + +M+ G D N+++ GL +K+ + K +A F +M
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL-VKNGQVK----EAMCFFHQM 669
Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEAL-IHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
KK+ D T ++ + K ++A I + P + + ++I ++ E
Sbjct: 670 -KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAG 728
Query: 421 IDKAL 425
ID A+
Sbjct: 729 IDNAV 733
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 152/334 (45%), Gaps = 7/334 (2%)
Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
G+ P T++++I + A+ V + G P+V T+ L+++ KSG++ E
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMD 233
E+ +M C+ N T+N ++ GL G V++A ++ ++ +D P TY ++D
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
G K GR EA +L ++ G PN +N L NG+ K G L K M K P
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLED 353
D +YS L++ L G++ + FKE+ G D N ++ GL + LE+
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL-----GKSHRLEE 1014
Query: 354 AYQVFEKMTKKVSVT-DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
A +F +M +T D TY +I LG +EA + G P TFN +I
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
+ GK + A + M P+ +Y+ L
Sbjct: 1075 RGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 192/419 (45%), Gaps = 10/419 (2%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDF-NDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
+KAS +++ I + + + + F DL+ +++ + AV F + G+ +
Sbjct: 688 VKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD 747
Query: 120 SWTFSI-MIRCYCNKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEV 177
+ + +IR C N+ AR + + D G P + T+ +L+ L ++ ++ A +V
Sbjct: 748 GDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDV 807
Query: 178 LDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCK 237
Q+ GC P++ TYN LL G+++E +E+ + + + T+ V+ G K
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 238 VGRSNEAMELLNEAI-ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI 296
G ++A++L + + +R +P T+ L +G K G + L + M C P+
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 297 SYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQ 356
Y+ L+NG K G+ A ++FK MV+ G D + + L+ LCM +++
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR-----VDEGLH 982
Query: 357 VFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHH-AIEMGHIPRTITFNNVIQAL 415
F+++ + D Y ++I LGK + +EAL+ + G P T+N++I L
Sbjct: 983 YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042
Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
G +++A + + P+ +++ LI K A A+Y + G P
Sbjct: 1043 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 190/454 (41%), Gaps = 45/454 (9%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K + E I + + ++G V N L+ L + + A K F L P
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T++ ++ EA ++ + M G PN TF L + LCK+ + AL++L +M
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
+GC P++ TYN ++ GL G+V+EA +K + PD T ++ G K
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLI 693
Query: 242 NEAM--------------------ELLNEAIERGVTPNVVTFNT--LFNGYCKEGTPM-- 277
+A +L+ + N V+F+ + NG C++G +
Sbjct: 694 EDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILV 753
Query: 278 ------------KGVGLL--KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
G L K K P +Y+ L+ GLL+ I A +F ++
Sbjct: 754 PIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS 813
Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKG 383
G D N LL ++ + +++ ++++++M+ + T+ IVI L K
Sbjct: 814 TGCIPDVATYNFLL-----DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 384 KKTDEAL-IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTS 442
D+AL ++ + P T+ +I L G++ +A L M ++ P+
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 443 YDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
Y++LI + ++ ACAL+ +K+GV P K
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 2/245 (0%)
Query: 61 IKASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPN 119
+KA + + +D++ + D + + + L+ L A + F YG PN
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925
Query: 120 SWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLD 179
++I+I + + A + M G P++ T+++LV+ LC GR+ E L
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985
Query: 180 QMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMDGFCKV 238
++ G P++ YN ++ GL R+EEA + +K G+ PD+YTY +++
Sbjct: 986 ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA 1045
Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
G EA ++ NE G+ PNV TFN L GY G P + + M P+ +Y
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Query: 299 STLLN 303
L N
Sbjct: 1106 EQLPN 1110
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 172/431 (39%), Gaps = 7/431 (1%)
Query: 45 LKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETA 104
LK R +R R +K D S+ + + +S ++ L + +++
Sbjct: 43 LKIGSRKKHWRRKSMRCSVVSMKSS-DFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSS 101
Query: 105 VKFF-SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
+F S A + L + T + M+ E V D M + T+ +
Sbjct: 102 FSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFK 161
Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
SL G LK+A L +M G N +YN L+ L EA E+ + +G +P
Sbjct: 162 SLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRP 221
Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
+ TY+++M G K + M LL E G+ PNV TF + G + +L
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
K M C PD ++Y+ L++ L K+ A +F++M + D +LL
Sbjct: 282 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL-----D 336
Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
+ + L+ Q + +M K V D T+ I++ L K EA L + G +P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
T+N +I L ++D AL L M P+ +Y + I + S A +
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 464 GAALKQGVIPQ 474
+G+ P
Sbjct: 457 EKMKTKGIAPN 467
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 208/413 (50%), Gaps = 21/413 (5%)
Query: 72 IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG---LAPNSWTFSIMIR 128
+FD + + G S+ N L A V + AV ++ + G + P+ T+ I+I
Sbjct: 37 VFDELLRRGRGASIYGLNRAL-ADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95
Query: 129 CYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE-VLDQMGRIGCK 187
C C + + G+ + FT L+ LC R +A++ VL +M +GC
Sbjct: 96 CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155
Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND---GLKPDVYTYTAVMDGFCKVGRSNEA 244
PN+ +YN LLKGLC R +EA E+L + +D G PDV +YT V++GF K G S++A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 245 MELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNG 304
+E ++RG+ P+VVT+N++ CK K + +L M K +PD ++Y+++L+G
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275
Query: 305 LLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK 364
G+ + A+ K+M G E D + L+ LC + +A ++F+ MTK+
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLC-----KNGRCMEARKIFDSMTKR 330
Query: 365 VSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM----GHIPRTITFNNVIQALCGEGK 420
+ TYG TL +G T AL+ +H +++ G P F+ +I A +GK
Sbjct: 331 GLKPEITTYG----TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
+D+A+L+ M + P+ +Y +I L + + DA + + +G+ P
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Score = 174 bits (442), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 202/410 (49%), Gaps = 11/410 (2%)
Query: 67 KERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIM 126
KE I ++ DG V ++ L+ L A K F + GL P T+ +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342
Query: 127 IRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGC 186
++ Y K E ++D M NG HP+ F+IL+ + K G++ +A+ V +M + G
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402
Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
PN TY ++ LC GRVE+A + ++GL P Y +++ G C + A E
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462
Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
L+ E ++RG+ N + FN++ + +CKEG ++ L +LM + P+ I+Y+TL+NG
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522
Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
GK+ A+ + MV G + + ++L+ G C S +EDA +F++M
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR-----MEDALVLFKEMESSGV 577
Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
D TY I+++ L + ++T A E G T+N ++ LC D AL
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637
Query: 427 L---LFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
+ L LM K+ +RT ++++I L ++ ++ +A L+ A G++P
Sbjct: 638 MFQNLCLM--DLKLEART-FNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 684
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 187/391 (47%), Gaps = 14/391 (3%)
Query: 72 IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
IFDS+ K G ++ + LL G+ P+ + FSI+I Y
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
+ +A V M G +PN T+ ++ LCKSGR+++A+ +QM G P
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
YN L+ GLC + E A E+++ + + G+ + + +++D CK GR E+ +L
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
+ GV PNV+T+NTL NGYC G + + LL M P+ ++YSTL+NG K ++
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562
Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
A+ +FKEM G D N +L+GL A +++ ++T+ + +
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA-----AKELYVRITESGTQIELS 617
Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLM 431
TY I++ L K K TD+AL + M TFN +I AL G+ D+A L
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677
Query: 432 YEHAKIPSRTSYDM---------LITKLDQL 453
+ +P+ +Y + L+ +LDQL
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 213/467 (45%), Gaps = 58/467 (12%)
Query: 58 VDRIKASPL-------KERIDIFDSIKKDGTNW----SVSDFNDLLMALVMLNEQETAVK 106
VD I +PL K D D + + T +V +N LL L N + A++
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALE 179
Query: 107 FF---SEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
++ G P+ +++ +I + + D +A M D G P+V T+ ++
Sbjct: 180 LLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIA 239
Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
+LCK+ + +A+EVL+ M + G P+ TYN +L G C G+ +EA L +++DG++P
Sbjct: 240 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEP 299
Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
DV TY+ +MD CK GR EA ++ + +RG+ P + T+ TL GY +G ++ GLL
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359
Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF----------------- 326
LM + PD +S L+ K GK+ A+ +F +M + G
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419
Query: 327 -EVDERMM-----------------NSLLRGLCM-KSWEEKDLLEDAYQVFEKMTKKVSV 367
V++ M+ NSL+ GLC WE + L + E + + + +
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL-----ILEMLDRGICL 474
Query: 368 TDPGTYGIVIRTLGKGKKTD-EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
I+ +G+ + E L L + +G P IT+N +I C GK+D+A+
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFEL--MVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532
Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
LL M P+ +Y LI ++ + DA L+ GV P
Sbjct: 533 LLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 176/372 (47%), Gaps = 41/372 (11%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K + + + +F +++ G N + + ++ L E A+ +F + GL+P +
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
++ +I C N + A ++I M D G N F +++S CK GR+ E+ ++ + M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
RIG KPN+ TYN L+ G C G+++EA ++L + + GLKP+ TY+ +++G+CK+ R
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
+A+ L E GV+P+++T+N +
Sbjct: 563 EDALVLFKEMESSGVSPDIITYN-----------------------------------II 587
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
L GL + + A ++ + G +++ N +L GLC + L +DA Q+F+ +
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC-----KNKLTDDALQMFQNL 642
Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
+ T+ I+I L K + DEA G +P T+ + + + G+G +
Sbjct: 643 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 702
Query: 422 DKALLLLFLMYE 433
++ L LFL E
Sbjct: 703 EE-LDQLFLSME 713
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 147/344 (42%), Gaps = 48/344 (13%)
Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK---PNIQTYN 194
+AR V D + G ++ + + + A+ ++M R G P++ TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 195 CLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL-LNEAIE 253
L+ C GR++ + L NV G + D +T ++ G C R+++AM++ L E
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 254 RGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM---KKRNCLPDKISYSTLLNGLLKWGK 310
G PNV ++N L G C E + + LL +M + PD +SY+T++NG K G
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
+ AY + +M + + D
Sbjct: 212 S----------------------------------------DKAYSTYHEMLDRGILPDV 231
Query: 371 GTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFL 430
TY +I L K + D+A+ L+ ++ G +P +T+N+++ C G+ +A+ L
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291
Query: 431 MYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
M P +Y +L+ L + + +A ++ + K+G+ P+
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 71 DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCY 130
+++ I + GT +S +N +L L + A++ F L + TF+IMI
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661
Query: 131 --CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKP 188
+ND EA+ + NG PN T+ ++ ++ G L+E ++ M GC
Sbjct: 662 LKVGRND--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTV 719
Query: 189 NIQTYNCLLKGLCYVGRVEEA 209
+ N +++ L G + A
Sbjct: 720 DSGMLNFIVRELLQRGEITRA 740
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 201/429 (46%), Gaps = 43/429 (10%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
L + +D+F + + S+ +FN LL A+ +N+ + + + ++ + ++++I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI- 184
+I C+C ++ A V+ M GY P++ T + L+N C R+ EA+ ++DQM +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 185 ----------------------------------GCKPNIQTYNCLLKGLCYVGRVEEAY 210
GC+P++ TY ++ GLC G ++ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
+L ++ ++ DV YT ++D C N+A+ L E +G+ PNVVT+N+L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
C G LL M +R P+ +++S L++ +K GK+ A ++ EM++ + D
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
+SL+ G CM D L++A +FE M K + TY +I+ K K+ +E +
Sbjct: 361 FTYSSLINGFCM-----HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML---I 447
+ G + T+T+N +IQ L G D A + M P +Y +L +
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 448 TKLDQLEKS 456
K +LEK+
Sbjct: 476 CKYGKLEKA 484
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 211/442 (47%), Gaps = 15/442 (3%)
Query: 26 FNKLV--VFAAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDI------FDSIK 77
FN L+ +F S A +L + R Q F + L +R DI ++
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 78 KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
K V + ++ AL A+ F+E + G+ PN T++ +IRC CN +
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307
Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
+A +++ M + +PNV TF+ L+++ K G+L EA ++ D+M + P+I TY+ L+
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
G C R++EA M + + P+V TY ++ GFCK R E MEL E +RG+
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
N VT+NTL G + G + K M PD I+YS LL+GL K+GK+ A+ +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
F+ + + E D N ++ G+C + +ED + +F ++ K + Y +I
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMC-----KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
+ +EA E G +P + T+N +I+A +G + L+ M +
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Query: 438 PSRTSYDMLITKLD--QLEKSY 457
++ M+I L +LEKSY
Sbjct: 603 GDASTISMVINMLHDGRLEKSY 624
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 196/386 (50%), Gaps = 5/386 (1%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
FN L+ L + N+ AV + G P+ +T+ ++ C + D A ++ M
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
+V +T ++++LC + +AL + +M G +PN+ TYN L++ LC GR
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
+A +L ++ + P+V T++A++D F K G+ EA +L +E I+R + P++ T+++L
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
NG+C + + +LM ++C P+ ++Y+TL+ G K ++ + +F+EM + G
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
+ N+L++GL ++ D + A ++F+KM D TY I++ L K K +
Sbjct: 428 GNTVTYNTLIQGL----FQAGD-CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
+AL+ + + P T+N +I+ +C GK++ L + P+ Y +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
+ + +A AL+ + G +P
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLP 568
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 174/362 (48%), Gaps = 8/362 (2%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ + +++F + G +V +N L+ L A + S+ + PN TFS
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
+I + + EA K+ D M P++ T++ L+N C RL EA + + M
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
C PN+ TYN L+KG C RVEE E+ + GL + TY ++ G + G + A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
++ + + GV P+++T++ L +G CK G K + + + ++K PD +Y+ ++ G+
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
K GK+ +F + G + + + +++ G C K L E+A +F +M +
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC-----RKGLKEEADALFREMKEDG 565
Query: 366 SVTDPGTYGIVIRT-LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
++ + GTY +IR L G K A + + G + T + VI L +G+++K+
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAEL-IKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
Query: 425 LL 426
L
Sbjct: 624 YL 625
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 156/321 (48%), Gaps = 5/321 (1%)
Query: 32 FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
++ AS ++ ++ K NP + +D +K L E ++D + K + + ++
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 91 LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
L+ M + + A F S PN T++ +I+ +C E ++ M G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
N T+ L+ L ++G A ++ +M G P+I TY+ LL GLC G++E+A
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
+ ++ ++PD+YTY +++G CK G+ + +L +GV PNV+ + T+ +G+
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
C++G + L + MK+ LP+ +Y+TL+ L+ G + + KEM GF D
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDA 605
Query: 331 R----MMNSLLRGLCMKSWEE 347
++N L G KS+ E
Sbjct: 606 STISMVINMLHDGRLEKSYLE 626
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 147/304 (48%), Gaps = 5/304 (1%)
Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
+L +A+++ +M + P+I +N LL + + + + + ++N + D+Y+Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
+++ FC+ + A+ +L + ++ G P++VT ++L NGYC + V L+ M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
P+ ++++TL++GL K AV++ MV G + D +++ GLC + + D
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG--DID 237
Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
L A + +KM K D Y +I L K ++AL G P +T+N
Sbjct: 238 L---ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
++I+ LC G+ A LL M E P+ ++ LI + K +A LY +K+
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 470 GVIP 473
+ P
Sbjct: 355 SIDP 358
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
KA +++ D+F S+ G +V + ++ +E A F E G PNS
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL-KEALEVL 178
T++ +IR D + ++I M G+ + +T ++++N L GRL K LE+L
Sbjct: 572 TYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSYLEML 628
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 188/418 (44%), Gaps = 40/418 (9%)
Query: 68 ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
+ +D+F + + + DF+ L + + + + + G+A N +T SIMI
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
C C A + + GY P+ TF+ L+N LC GR+ EALE++D+M +G K
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 188 PNIQTYNCLLKGLCYVGRVEEAY-----------------------------------EM 212
P + T N L+ GLC G+V +A E+
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
L ++ +K D Y+ ++DG CK G + A L NE +G +++ + TL G+C
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
G G LL+ M KR PD +++S L++ +K GK+R A + KEM++ G D
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
SL+ G C +++ L+ A + + M K + T+ I+I K D+ L
Sbjct: 355 YTSLIDGFC-----KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
G + T+T+N +IQ C GK++ A L M P SY +L+ L
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 187/417 (44%), Gaps = 40/417 (9%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ E +++ D + + G ++ N L+ L + + AV G PN T+
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
+++ C A +++ M + + ++I+++ LCK G L A + ++M G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 186 CKPNIQTYNCLLKGLCYVGR-----------------------------------VEEAY 210
K +I Y L++G CY GR + EA
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
E+ + G+ PD TYT+++DGFCK + ++A +L+ + +G PN+ TFN L NGY
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
CK G+ L + M R + D ++Y+TL+ G + GK+ A +F+EMV D
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
LL GLC EK A ++FEK+ K D G Y I+I + K D+A
Sbjct: 458 VSYKILLDGLCDNGEPEK-----ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
G P T+N +I LC +G + +A LL M E P+ +Y++LI
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 174/353 (49%), Gaps = 10/353 (2%)
Query: 76 IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKND 135
IK D +S+ ++ L + A F+E G + ++ +IR +C
Sbjct: 243 IKLDAVKYSI-----IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
+ + K++ M P+V F+ L++ K G+L+EA E+ +M + G P+ TY
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
L+ G C ++++A ML + + G P++ T+ +++G+CK ++ +EL + RG
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
V + VT+NTL G+C+ G L + M R PD +SY LL+GL G+ A+
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
IF+++ + E+D + N ++ G+C S ++DA+ +F + K D TY I
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASK-----VDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
+I L K EA + E GH P T+N +I+A GEG K+ L+
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 156/330 (47%), Gaps = 8/330 (2%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K L ++F+ ++ G + + L+ + K + + P+
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
FS +I C+ + EA ++ M G P+ T+T L++ CK +L +A +LD M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
GC PNI+T+N L+ G C +++ E+ + G+ D TY ++ GFC++G+
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
A EL E + R V P++V++ L +G C G P K + + + ++K D Y+ +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK-SWEEKDLLEDAYQVFEK 360
++G+ K+ A +F + G + D + N ++ GLC K S E DLL F K
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL------FRK 552
Query: 361 MTKKVSVTDPGTYGIVIRT-LGKGKKTDEA 389
M + + TY I+IR LG+G T A
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 127/269 (47%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
+K L+E ++ + + G + + L+ N+ + A S G PN
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
TF+I+I YC N + ++ M G + T+ L+ C+ G+L+ A E+ +
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M +P+I +Y LL GLC G E+A E+ ++ ++ D+ Y ++ G C +
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
++A +L +GV P+V T+N + G CK+G+ + L + M++ P+ +Y+
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
L+ L G + + +E+ R GF VD
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 63 ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
AS + + D+F S+ G V +N ++ L A F + G +PN T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
++I+IR + + D ++ K+I+ + G+ + +T ++V+ L GRLK++
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSF 616
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 217/482 (45%), Gaps = 34/482 (7%)
Query: 26 FNKLVVFAAASLSTAESLDLKEN-PRSLQAQRFVDR--IKASPLKERIDIFDSIKKDGTN 82
F K F L TA+SL N ++ + R + R + L E + + ++ G
Sbjct: 120 FEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLT 179
Query: 83 WSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKV 142
S N +L V L E A F E S G+ P+S ++ +M+ EA +
Sbjct: 180 PSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRW 239
Query: 143 IDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCY 202
+ M G+ P+ T T+++ +LC++G + A+ +M +G KPN+ + L+ GLC
Sbjct: 240 LTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 299
Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGV-TPNVV 261
G +++A+EML + +G KP+VYT+TA++DG CK G + +A L + + PNV
Sbjct: 300 KGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVH 359
Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
T+ ++ GYCKE + L MK++ P+ +Y+TL+NG K G A + M
Sbjct: 360 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLM 419
Query: 322 VRFGFEVDERMMNSLLRGLCMKSW--EEKDLLEDAYQV---------------------- 357
GF + N+ + LC KS E +LL A+
Sbjct: 420 GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI 479
Query: 358 ------FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNV 411
F +M K D I+I + KK E+ + +G IP T+ ++
Sbjct: 480 NQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSM 539
Query: 412 IQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
I C EG ID AL M H +P +Y LI+ L + +AC LY A + +G+
Sbjct: 540 ISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 599
Query: 472 IP 473
P
Sbjct: 600 SP 601
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 182/412 (44%), Gaps = 10/412 (2%)
Query: 43 LDLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
+DL P + +D + K +K+ ++ + + ++G +V L+ L
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338
Query: 102 ETAVKFFSE-ASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI 160
E A + F + S PN T++ MI YC ++ A + M + G PNV T+T
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 161 LVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDG 220
L+N CK+G A E+++ MG G PNI TYN + LC R EAYE+L + G
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Query: 221 LKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGV 280
L+ D TYT ++ CK N+A+ + G ++ N L +C++ +
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518
Query: 281 GLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
L +L+ +P K +Y+++++ K G I A+ F M R G D SL+ GL
Sbjct: 519 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578
Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
C KS ++++A +++E M + T + K + A+I L ++
Sbjct: 579 CKKS-----MVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMI-LLEPLDKK 632
Query: 401 HIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
RT+ +++ LC E K+ A L + E R + T +
Sbjct: 633 LWIRTV--RTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSE 682
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 191/386 (49%), Gaps = 5/386 (1%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
+N L+ +N + A + S +P++ T++IMI C++ A KV++ +
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
+ P V T+TIL+ + G + EAL+++D+M G KP++ TYN +++G+C G V+
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
A+EM+ N++ G +PDV +Y ++ G+ E +L+ + PNVVT++ L
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
C++G + + LLKLMK++ PD SY L+ + G++ A+ + M+ G
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
D N++L LC ++ A ++F K+ + + +Y + L
Sbjct: 401 PDIVNYNTVLATLCKNGKADQ-----ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
AL + + G P IT+N++I LC EG +D+A LL M PS +Y++++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
+ + DA + + + G P
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRP 541
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 175/382 (45%), Gaps = 38/382 (9%)
Query: 70 IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
+ + + + D +V + L+ A ++ + A+K E S GL P+ +T++ +IR
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
C + A +++ + G P+V ++ IL+ +L G+ +E +++ +M C PN
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
+ TY+ L+ LC G++EEA +L +K GL PD Y+Y ++ FC+ GR + A+E L
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
I G P++V +NT+ CK G + + + + + C P+ SY+T+ + L G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC--------------MKSWE--------- 346
A+ + EM+ G + DE NS++ LC M+S E
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 347 -------EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
+ +EDA V E M + TY ++I +G EA+ + + +
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Query: 400 GHIP--------RTITFNNVIQ 413
I RT NV+Q
Sbjct: 573 DAISEYSFKRLHRTFPLLNVLQ 594
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 169/347 (48%), Gaps = 14/347 (4%)
Query: 131 CNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
C ++ E+ +++ M GY+P+V T L+ + +A+ V++ + + G +P++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNE 250
YN L+ G C + R+++A +L +++ PD TY ++ C G+ + A+++LN+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 251 AIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK 310
+ P V+T+ L EG + + L+ M R PD +Y+T++ G+ K G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 311 IRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKS-WEEKDLLEDAYQVFEKMTKKVSV-T 368
+ A + + + G E D N LLR L + WEE + L MTK S
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL---------MTKMFSEKC 329
Query: 369 DPG--TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
DP TY I+I TL + K +EA+ L E G P +++ +I A C EG++D A+
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
L M +P +Y+ ++ L + K+ A ++G + G P
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 41/314 (13%)
Query: 166 CKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDV 225
C+SG E+L +L+ M R G P++ L+KG + + +A ++ ++ G +PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
+ Y A+++GFCK+ R ++A +L+ + +P+ VT+N + C G + +L
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
+ NC P I+Y+ L+ + G + A+ + EM+ G + D
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD---------------- 262
Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
+F TY +IR + K D A + + G P
Sbjct: 263 -----------MF-------------TYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
I++N +++AL +GK ++ L+ M+ P+ +Y +LIT L + K +A L
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 466 ALKQGVIPQRKPQD 479
++G+ P D
Sbjct: 359 MKEKGLTPDAYSYD 372
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 266 LFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFG 325
+F+ C+ G ++ + LL+ M ++ PD I + L+ G I AV + + + +FG
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 326 FEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKK 385
+ D N+L+ G C + + ++DA +V ++M K D TY I+I +L K
Sbjct: 155 -QPDVFAYNALINGFC-----KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 386 TDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDM 445
D AL L+ + P IT+ +I+A EG +D+AL L+ M P +Y+
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 446 LI 447
+I
Sbjct: 269 II 270
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 220/452 (48%), Gaps = 43/452 (9%)
Query: 62 KASPLKERIDIFDSIKKD-GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
K S + +D+F +++ G ++ +N LL A V + F+ + G+APN
Sbjct: 90 KNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNL 149
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
T++++I+ C K +F +AR +D M+ G+ P+V +++ ++N L K+G+L +ALE+ D+
Sbjct: 150 QTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDE 209
Query: 181 MGRIGCK------------------------------------PNIQTYNCLLKGLCYVG 204
M G PN++T+N ++ GL G
Sbjct: 210 MSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG 269
Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
RV++ ++ +K + + D+YTY++++ G C G ++A + NE ER + +VVT+N
Sbjct: 270 RVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYN 329
Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
T+ G+C+ G + + L ++M+ +N + + +SY+ L+ GLL+ GKI A I++ M
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAK 388
Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
G+ D+ + GLC+ + K A V +++ D Y +I L K K
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNK-----ALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443
Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
+ +EA + + G + N +I L + ++ +A L M ++ P+ SY+
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN 503
Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
+LI L + K +A A L+ G P K
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 125/239 (52%)
Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
A+ E S G + + ++ +I C C K EA ++ M +G N L+
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
L + RL EA L +MG+ GC+P + +YN L+ GLC G+ EA + + +G KP
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532
Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
D+ TY+ ++ G C+ + + A+EL ++ ++ G+ +V+ N L +G C G + ++
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592
Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
M+ RNC + ++Y+TL+ G K G A I+ M + G + D N++++GLCM
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCM 651
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 203/467 (43%), Gaps = 67/467 (14%)
Query: 73 FDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCN 132
D + K+G V ++ ++ L + + A++ F E S G+AP+ ++I+I +
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 133 KNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
+ D A ++ D + D+ +PNV T I+++ L K GR+ + L++ ++M + + ++
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
TY+ L+ GLC G V++A + + DV TY ++ GFC+ G+ E++EL
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RI 350
Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
+E + N+V++N L G + G + + +LM + DK +Y ++GL G +
Sbjct: 351 MEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410
Query: 312 RPAVSIF-----------------------------------KEMVRFGFEVDERMMNSL 336
A+ + KEM + G E++ + N+L
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 337 LRGL--------------------CMKSWEEKDLL----------EDAYQVFEKMTKKVS 366
+ GL C + ++L +A ++M +
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530
Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
D TY I++ L + +K D AL H ++ G + N +I LC GK+D A+
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
++ M + +Y+ L+ ++ S A ++G K G+ P
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP 637
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 185/412 (44%), Gaps = 6/412 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K + + + I++ +K++ + ++ L+ L + A F+E + +
Sbjct: 267 KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 326
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T++ M+ +C E+ ++ M ++ N+ ++ IL+ L ++G++ EA + M
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLM 385
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
G + TY + GLC G V +A ++ V++ G DVY Y +++D CK R
Sbjct: 386 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL 445
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
EA L+ E + GV N N L G ++ + L+ M K C P +SY+ L
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
+ GL K GK A + KEM+ G++ D + + LL GLC + DL A +++ +
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD--RKIDL---ALELWHQF 560
Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
+ TD + I+I L K D+A+ + + +T+N +++ G
Sbjct: 561 LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDS 620
Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
++A ++ MY+ P SY+ ++ L A + A G+ P
Sbjct: 621 NRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 153/326 (46%), Gaps = 5/326 (1%)
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
+++I+I+ EA + M GY + TT+ I ++ LC +G + +AL V+ ++
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
G ++ Y ++ LC R+EEA ++ + G++ + + A++ G + R
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
EA L E + G P VV++N L G CK G + +K M + PD +YS L
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
L GL + KI A+ ++ + ++ G E D M N L+ GLC L+DA V M
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC-----SVGKLDDAMTVMANM 595
Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
+ + TY ++ K ++ A + + +MG P I++N +++ LC +
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV 655
Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLI 447
A+ H P+ ++++L+
Sbjct: 656 SYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 127/271 (46%)
Query: 70 IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
+ + ++ G + V + ++ L E A E S +G+ NS + +I
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
+ EA + M NG P V ++ IL+ LCK+G+ EA + +M G KP+
Sbjct: 474 LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
++TY+ LL GLC +++ A E+ GL+ DV + ++ G C VG+ ++AM ++
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMA 593
Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
R T N+VT+NTL G+ K G + + M K PD ISY+T++ GL
Sbjct: 594 NMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCR 653
Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGL 340
+ A+ F + G N L+R +
Sbjct: 654 GVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
I+ S L E + K+G +V +N L+ L + A F E G P+
Sbjct: 475 IRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
T+SI++ C A ++ +G +V IL++ LC G+L +A+ V+
Sbjct: 535 KTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMAN 594
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M C N+ TYN L++G VG A + + GL+PD+ +Y +M G C
Sbjct: 595 MEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG 654
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTL 266
+ AME ++A G+ P V T+N L
Sbjct: 655 VSYAMEFFDDARNHGIFPTVYTWNIL 680
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR-FGFEVDERMMNSLLRGL 340
+++L++ + C D+ +++ K A+ +FK M FG E R N+LL
Sbjct: 65 IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 341 C-MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
K W + +E + FE T V+ + TY ++I+ K K+ ++A L +
Sbjct: 125 VEAKQWVK---VESLFAYFE--TAGVA-PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKE 178
Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
G P +++ VI L GK+D AL L M E P T Y++LI
Sbjct: 179 GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILI 226
Score = 36.2 bits (82), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPG--TYGIVIRTLGKGKKTDEALIHLHHAIEM 399
+K++ + + + A VF++M +++ +P +Y ++ + K+ + +
Sbjct: 85 IKTYGKNSMPDQALDVFKRM-REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
G P T+N +I+ C + + +KA L M++ P SY +I L + K DA
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 460 CALYGAALKQGVIP 473
L+ ++GV P
Sbjct: 204 LELFDEMSERGVAP 217
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 213/439 (48%), Gaps = 40/439 (9%)
Query: 70 IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
I + + +++ G + ++ +N L+ ++ A+ + G P+ T S ++
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
YC+ +A ++D M + GY P+ TFT L++ L + EA+ ++D+M + GC+PN
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 190 IQTYNCLLKGLCYVGRVEEAYEML-----------------------------------M 214
+ TY ++ GLC G ++ A+ +L
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284
Query: 215 NVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
++N G++P+V TY++++ C R ++A LL++ IER + PNVVTFN L + + KEG
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
++ L M KR+ PD +YS+L+NG ++ A +F+ M+ + N
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
+L+ G C + +++ ++F +M+++ V + TY +I + + D A +
Sbjct: 405 TLINGFC-----KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLE 454
+ G P +T+N ++ LC GK++KA+++ + P+ +Y+++I + +
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 455 KSYDACALYGAALKQGVIP 473
K D L+ + +GV P
Sbjct: 520 KVEDGWDLFCSLSLKGVKP 538
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 197/408 (48%), Gaps = 5/408 (1%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ + + + D + + G F L+ L + N+ AV G PN T+ +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ C + D A +++ M NV ++ +++SLCK +AL + +M G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
+PN+ TY+ L+ LC R +A +L ++ + P+V T+ A++D F K G+ EA
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
+L +E I+R + P++ T+++L NG+C + + +LM ++C P+ ++Y+TL+NG
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
K +I V +F+EM + G + +L+ G ++ +D ++A VF++M
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF----FQARD-CDNAQMVFKQMVSDG 465
Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
+ TY ++ L K K ++A++ + P T+N +I+ +C GK++
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 426 LLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
L + P Y+ +I+ + +A AL+ + G +P
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 149 bits (375), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 157/320 (49%), Gaps = 40/320 (12%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
++ ++ +L ++ A+ F+E + G+ PN T+S +I C CN + +A +++ M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
+ +PNV TF L+++ K G+L EA ++ D+M + P+I TY+ L+ G C R++
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG------------ 255
EA M + + P+V TY +++GFCK R +E +EL E +RG
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 256 -----------------------VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
V PN++T+NTL +G CK G K + + + +++
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
P +Y+ ++ G+ K GK+ +F + G + D + N+++ G C K L E
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC-----RKGLKE 557
Query: 353 DAYQVFEKMTKKVSVTDPGT 372
+A +F KM + + D GT
Sbjct: 558 EADALFRKMREDGPLPDSGT 577
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 35/248 (14%)
Query: 82 NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK 141
N +V FN L+ A V + A K + E + P+ +T+S +I +C + EA+
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 142 VIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALE------------------------- 176
+ + M PNV T+ L+N CK+ R+ E +E
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 177 ----------VLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVY 226
V QM G PNI TYN LL GLC G++E+A + ++ ++P +Y
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
TY +++G CK G+ + +L +GV P+V+ +NT+ +G+C++G + L + M
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 287 KKRNCLPD 294
++ LPD
Sbjct: 567 REDGPLPD 574
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 151/314 (48%), Gaps = 6/314 (1%)
Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
IL N L S +L +A+ + M + P+I +N LL + + + + + ++
Sbjct: 56 ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
G+ ++YTY +++ FC+ + + A+ LL + ++ G P++VT ++L NGYC
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
V L+ M + PD I+++TL++GL K AV++ MV+ G + + ++ G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
LC + + DL A+ + KM + Y VI +L K + D+AL
Sbjct: 235 LCKRG--DIDL---AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDA 459
G P IT++++I LC + A LL M E P+ +++ LI + K +A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 460 CALYGAALKQGVIP 473
LY +K+ + P
Sbjct: 350 EKLYDEMIKRSIDP 363
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 134/309 (43%), Gaps = 30/309 (9%)
Query: 188 PNIQTYNCLLKGLCYVGRV-----EEAYEMLMN-----------------VKNDGLKPDV 225
P I + L G+CY GR + E+L N VK+ L P +
Sbjct: 27 PRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPL-PSI 85
Query: 226 YTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKL 285
+ + ++ K+ + + + L + G++ N+ T+N L N +C+ + LL
Sbjct: 86 FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 145
Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
M K P ++ S+LLNG +I AV++ +MV G+ D +L+ GL + +
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PR 404
+A + ++M ++ + TYG+V+ L K D A +L + +E I
Sbjct: 206 A-----SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF-NLLNKMEAAKIEAN 259
Query: 405 TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYG 464
+ ++ VI +LC D AL L M P+ +Y LI+ L E+ DA L
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 465 AALKQGVIP 473
+++ + P
Sbjct: 320 DMIERKINP 328
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 175 bits (444), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 207/437 (47%), Gaps = 45/437 (10%)
Query: 50 RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
R + R D IK + + +D+F + K S+ +FN LL A+ +N+ E +
Sbjct: 51 REILRNRLSDIIK---VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGE 107
Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
+ + G++ + +T+SI I C+C ++ A V+ M GY P++ T + L+N C S
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK 167
Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
R+ +A+ ++DQM +G KP+ T+ L+ GL + EA ++ + G +PD+ TY
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 230 AVMDGFCKVGRSNEAMELLN-----------------------------------EAIER 254
V++G CK G + A+ LLN E +
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 255 GVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPA 314
G+ PNVVT+N+L N C G LL M ++ P+ ++++ L++ K GK+ A
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 315 VSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYG 374
+ +EM++ + D N L+ G CM + L++A Q+F+ M K + + TY
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCM-----HNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 375 IVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEH 434
+I K K+ ++ + + G + T+T+ +IQ G D A ++ M +
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 435 AKIPSRT-SYDMLITKL 450
++P+ +Y +L+ L
Sbjct: 463 -RVPTDIMTYSILLHGL 478
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 171/327 (52%), Gaps = 8/327 (2%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
FN ++ +L E AV F+E + G+ PN T++ +I C CN + +A +++ M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
+ +PNV TF L+++ K G+L EA ++ ++M + P+ TYN L+ G C R++
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
EA +M + + P++ TY +++GFCK R + +EL E +RG+ N VT+ T+
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
G+ + G + K M D ++YS LL+GL +GK+ A+ IFK + + E
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
++ + N+++ G+C + + +A+ +F ++ K V TY +I L +
Sbjct: 501 LNIFIYNTMIEGMC-----KAGKVGEAWDLFCSLSIKPDVV---TYNTMISGLCSKRLLQ 552
Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQA 414
EA E G +P + T+N +I+A
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 192/414 (46%), Gaps = 37/414 (8%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ + + + D + + G F L+ L + N+ AV + G P+ T+
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ C + D A +++ M NV F +++SLCK ++ A+++ +M G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
+PN+ TYN L+ LC GR +A +L N+ + P+V T+ A++D F K G+ EA
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
+L E I+R + P+ +T+N L NG+C + + K M ++CLP+ +Y+TL+NG
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
K ++ V +F+EM + G + ++++G ++ D + A VF++M
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF----FQAGDC-DSAQMVFKQMVSNR 463
Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHH----------------------AIEMGHI- 402
TD TY I++ L K D AL+ + A ++G
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523
Query: 403 ---------PRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
P +T+N +I LC + + +A L M E +P+ +Y+ LI
Sbjct: 524 DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 8/309 (2%)
Query: 70 IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
+D+F ++ G +V +N L+ L A + S + PN TF+ +I
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
+ + EA K+ + M P+ T+ +L+N C RL EA ++ M C PN
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
IQTYN L+ G C RVE+ E+ + GL + TYT ++ GF + G + A +
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
+ + V +++T++ L +G C G + + K ++K + Y+T++ G+ K G
Sbjct: 458 QMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG 517
Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
K+ A +F + D N+++ GLC K LL++A +F KM + ++ +
Sbjct: 518 KVGEAWDLF---CSLSIKPDVVTYNTMISGLC-----SKRLLQEADDLFRKMKEDGTLPN 569
Query: 370 PGTYGIVIR 378
GTY +IR
Sbjct: 570 SGTYNTLIR 578
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 148/321 (46%), Gaps = 40/321 (12%)
Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
P++ F L++++ K + + + + +QM +G ++ TY+ + C ++ A +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
L + G +PD+ T +++++G+C R ++A+ L+++ +E G P+ TF TL +G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
+ V L+ M +R C PD ++Y T++NGL K G I A+++ +M + + +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
N+++ LC + +E A +F +M K
Sbjct: 261 FNTIIDSLC-----KYRHVEVAVDLFTEMETK---------------------------- 287
Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
G P +T+N++I LC G+ A LL M E P+ +++ LI +
Sbjct: 288 -------GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Query: 453 LEKSYDACALYGAALKQGVIP 473
K +A L+ +++ + P
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDP 361
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 38/220 (17%)
Query: 84 SVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVI 143
++ +N L+ E V+ F E S GL N+ T++ +I+ + D A+ V
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 144 DCMFDNGYHPNVTTFTILVNSLC-----------------------------------KS 168
M N ++ T++IL++ LC K+
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 169 GRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTY 228
G++ EA D + KP++ TYN ++ GLC ++EA ++ +K DG P+ TY
Sbjct: 517 GKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Query: 229 TAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
++ + + EL+ E G + T + + N
Sbjct: 574 NTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 201/423 (47%), Gaps = 24/423 (5%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
L + ID FD + + ++ D N ++ V +N + A+ + + + N ++F+I
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL---------- 175
+I+C+C+ + + + G+ P+V TF L++ LC R+ EAL
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 176 -----EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTA 230
+ DQM IG P + T+N L+ GLC GRV EA ++ + GL DV TY
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 231 VMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRN 290
+++G CK+G + A+ LL++ E + P+VV ++ + + CK+G L M ++
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 291 CLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDL 350
P+ +Y+ +++G +G+ A + ++M+ D N+L+ S +E L
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA----SVKEGKL 382
Query: 351 LEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNN 410
E A ++ ++M + D TY +I K + D+A H ++ P +TFN
Sbjct: 383 FE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNT 437
Query: 411 VIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQG 470
+I C ++D+ + LL + + + T+Y+ LI +++ A L+ + G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 471 VIP 473
V P
Sbjct: 498 VCP 500
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 180/402 (44%), Gaps = 38/402 (9%)
Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
AV F + GL P TF+ +I C + EA +++ M G H +V T+ +VN
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
+CK G K AL +L +M KP++ Y+ ++ LC G +A + + G+ P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
+V+TY ++DGFC GR ++A LL + IER + P+V+TFN L + KEG + L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF------------------------- 318
M R PD ++Y++++ G K + A +F
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 319 ------KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGT 372
+E+ R G + N+L+ G C E D L A +F++M D T
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFC-----EVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 373 YGIVIRTLGKGKKTDEALIHLHHAIEMGHIP-RTITFNNVIQALCGEGKIDKALLLLFLM 431
I++ + +K +EAL L I+M I T+ +N +I +C K+D+A L +
Sbjct: 505 CNILLYGFCENEKLEEAL-ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 432 YEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
H P +Y+++I+ DA L+ G P
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 193/425 (45%), Gaps = 39/425 (9%)
Query: 68 ERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMI 127
E + +FD + + G V FN L+ L + A ++ GL + T+ ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 128 RCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK 187
C D A ++ M + P+V ++ +++ LCK G +A + +M G
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 188 PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMEL 247
PN+ TYNC++ G C GR +A +L ++ + PDV T+ A++ K G+ EA +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 248 LNEAIERGV-------------------------------TPNVVTFNTLFNGYCKEGTP 276
+E + R + +P+VVTFNT+ + YC+
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
+G+ LL+ + +R + + +Y+TL++G + + A +F+EM+ G D N L
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
L G C E + LE+A ++FE + D Y I+I + KG K DEA
Sbjct: 509 LYGFC-----ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT---KLDQL 453
G P T+N +I CG+ I A +L M ++ P ++Y+ LI K ++
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 454 EKSYD 458
+KS +
Sbjct: 624 DKSIE 628
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 164/329 (49%), Gaps = 9/329 (2%)
Query: 100 EQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFT 159
A FSE G+APN +T++ MI +C+ + +A++++ M + +P+V TF
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND 219
L+++ K G+L EA ++ D+M P+ TYN ++ G C R ++A M + +
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS- 429
Query: 220 GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKG 279
PDV T+ ++D +C+ R +E M+LL E RG+ N T+NTL +G+C+
Sbjct: 430 ---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 280 VGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
L + M PD I+ + LL G + K+ A+ +F+ + ++D N ++ G
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 340 LCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEM 399
+C S +++A+ +F + D TY ++I +A + H +
Sbjct: 547 MCKGSK-----VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 400 GHIPRTITFNNVIQALCGEGKIDKALLLL 428
GH P T+N +I+ G+IDK++ L+
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 158/354 (44%), Gaps = 10/354 (2%)
Query: 72 IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
+F + + G +V +N ++ A + + + P+ TF+ +I
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
+ FEA K+ D M P+ T+ ++ CK R +A + D M P++
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVV 433
Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEA 251
T+N ++ C RV+E ++L + GL + TY ++ GFC+V N A +L E
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 252 IERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKI 311
I GV P+ +T N L G+C+ + + L ++++ D ++Y+ +++G+ K K+
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 312 RPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPG 371
A +F + G E D + N ++ G C KS + DA +F KM D
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA-----ISDANVLFHKMKDNGHEPDNS 608
Query: 372 TYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
TY +IR K + D+++ + G T ++ L +G++DK+
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLDKSF 661
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 109/221 (49%), Gaps = 1/221 (0%)
Query: 43 LDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQ 101
DL +P + +D +A + E + + I + G + + +N L+ ++
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 102 ETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTIL 161
A F E S+G+ P++ T +I++ +C EA ++ + + + + + I+
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 162 VNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGL 221
++ +CK ++ EA ++ + G +P++QTYN ++ G C + +A + +K++G
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
+PD TY ++ G K G ++++EL++E G + + T
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K S + E D+F S+ G V +N ++ + A F + G P++
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTI-LVNSLCKSGRLKEAL 175
T++ +IR + ++ ++I M NG+ + FTI +V L GRL ++
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD--AFTIKMVADLITDGRLDKSF 661
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 202/428 (47%), Gaps = 19/428 (4%)
Query: 52 LQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEA 111
LQ RF D ++ LKE +K+ G + +N L++ L + A F E
Sbjct: 463 LQNSRFGDAMRV--LKE-------MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 112 SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRL 171
GL PN++T+ I Y ++F A K + M + G PN T L+N CK G++
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 172 KEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
EA M G + +TY L+ GL +V++A E+ ++ G+ PDV++Y +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 232 MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNC 291
++GF K+G +A + +E +E G+TPNV+ +N L G+C+ G K LL M +
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Query: 292 LPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLL 351
P+ ++Y T+++G K G + A +F EM G D + +L+ G C + +
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC-----RLNDV 748
Query: 352 EDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD---EALIHLHH-AIEMGHIPRTIT 407
E A +F KK + + +I + K KT+ E L L + + P +T
Sbjct: 749 ERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 408 FNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAAL 467
+N +I LC EG ++ A L M +P+ +Y L+ D++ + + ++ A+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 468 KQGVIPQR 475
G+ P
Sbjct: 868 AAGIEPDH 875
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 163/357 (45%), Gaps = 6/357 (1%)
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
+T+ +++ C+ D A ++ M +G PNV +T L+ + ++ R +A+ VL +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M G P+I YN L+ GL R++EA L+ + +GLKP+ +TY A + G+ +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
A + + E E GV PN V L N YCK+G ++ + M + L D +Y+
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
L+NGL K K+ A IF+EM G D L+ G + + ++ A +F++
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING-----FSKLGNMQKASSIFDE 652
Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
M ++ + Y +++ + + ++A L G P +T+ +I C G
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
+ +A L M +P Y L+ +L A ++G K+G P
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAP 768
Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 171/398 (42%), Gaps = 48/398 (12%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K + E + S+ G + L+ L ++ + A + F E G+AP+ +
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
++ ++I + + +A + D M + G PNV + +L+ C+SG +++A E+LD+M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFC----- 236
G PN TY ++ G C G + EA+ + +K GL PD + YT ++DG C
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 237 -----------------------------KVGRSNEAMELLNE----AIERGVTPNVVTF 263
K G++ E+LN + +R PN VT+
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 264 NTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVR 323
N + + CKEG L M+ N +P I+Y++LLNG K G+ +F E +
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 324 FGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI-----VIR 378
G E D M + ++ + K L+ + ++M K +V D I ++
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALV-----LVDQMFAKNAVDDGCKLSISTCRALLS 923
Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALC 416
K + + A + + + + +IP + T +I C
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 153/327 (46%), Gaps = 45/327 (13%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K +++ IFD + ++G +V +N LL E E A + E S GL PN+
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL------ 175
T+ +I YC D EA ++ D M G P+ +T LV+ C+ ++ A+
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 176 ----------------------------EVLDQM-----GRIGCKPNIQTYNCLLKGLCY 202
EVL+++ R G KPN TYN ++ LC
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCK 817
Query: 203 VGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVT 262
G +E A E+ ++N L P V TYT++++G+ K+GR E + +EAI G+ P+ +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD--KISYST---LLNGLLKWGKIRPAVSI 317
++ + N + KEG K + L+ M +N + D K+S ST LL+G K G++ A +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKS 344
+ MVR + D + L+ C+ S
Sbjct: 938 MENMVRLQYIPDSATVIELINESCISS 964
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 154/338 (45%), Gaps = 5/338 (1%)
Query: 139 ARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLK 198
A K+ + M G P T+ +L++ LCK RL++A +L +M +G + TY+ L+
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 199 GLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
GL + A ++ + + G+ Y Y + K G +A L + I G+ P
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
+ +L GYC+E +G LL MKKRN + +Y T++ G+ G + A +I
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIR 378
KEM+ G + + +L+ K++ + DA +V ++M ++ D Y +I
Sbjct: 441 KEMIASGCRPNVVIYTTLI-----KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 379 TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIP 438
L K K+ DEA L +E G P T+ I + A + M E +P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 439 SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
++ LI + + K +AC+ Y + + QG++ K
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 165/386 (42%), Gaps = 5/386 (1%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
++ L+ L + E A E S G++ ++ T+S++I + A+ ++ M
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
+G + + + + K G +++A + D M G P Q Y L++G C V
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
+ YE+L+ +K + YTY V+ G C G + A ++ E I G PNVV + TL
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
+ + + +LK MK++ PD Y++L+ GL K ++ A S EMV G +
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
N+ G + + E A + ++M + + + +I K K
Sbjct: 520 P-----NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
EA ++ G + T+ ++ L K+D A + M P SY +LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 448 TKLDQLEKSYDACALYGAALKQGVIP 473
+L A +++ +++G+ P
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTP 660
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 155/359 (43%), Gaps = 5/359 (1%)
Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
GL P +T+ ++I C +A+ ++ M G + T+++L++ L K A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDG 234
++ +M G Y+C + + G +E+A + + GL P Y ++++G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 235 FCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPD 294
+C+ + ELL E +R + + T+ T+ G C G ++K M C P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 295 KISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDA 354
+ Y+TL+ L+ + A+ + KEM G D NSL+ GL + +++A
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL-----SKAKRMDEA 506
Query: 355 YQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQA 414
+M + + TYG I + + A ++ E G +P + +I
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
C +GK+ +A M + + +Y +L+ L + +K DA ++ +G+ P
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 152/380 (40%), Gaps = 26/380 (6%)
Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
G + + F I+ Y K EA V P ++ +L+++L + RL
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND--------------- 219
+V M +++TY+ L+ C G V+ ++L + +
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 220 ------GLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
GL P YTY ++DG CK+ R +A LL E GV+ + T++ L +G K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
GL+ M Y + + K G + A ++F M+ G +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
SL+ G C EK++ + Y++ +M K+ V P TYG V++ + D A +
Sbjct: 386 ASLIEGYC----REKNVRQ-GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQL 453
I G P + + +I+ + A+ +L M E P Y+ LI L +
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500
Query: 454 EKSYDACALYGAALKQGVIP 473
++ +A + ++ G+ P
Sbjct: 501 KRMDEARSFLVEMVENGLKP 520
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 110/291 (37%), Gaps = 37/291 (12%)
Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIER-------------------GVTPNVVT 262
K D +++ A+ C G +A+ ++ IER G + + V
Sbjct: 96 KLDSFSFLAL--DLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVL 153
Query: 263 FNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMV 322
F LF+GY +G + V + +P LL+ LL+W ++ ++K MV
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213
Query: 323 RFGFEVDERMMNSLLRGLCMKSWEE--KDLL--------------EDAYQVFEKMTKKVS 366
D + + L+ C + KD+L + A ++ E M K
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273
Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
V TY ++I L K K+ ++A L +G T++ +I L D A
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 427 LLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
L+ M H YD I + + A AL+ + G+IPQ +
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 187/382 (48%), Gaps = 5/382 (1%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ + I F +K + + +LL ++ LN T F+ E G N + F+I
Sbjct: 186 IPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNI 245
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ +C + + +A+KV D + P V +F L+N CK G L E + QM +
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
+P++ TY+ L+ LC +++ A+ + + GL P+ +T ++ G + G +
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
E + + +G+ P++V +NTL NG+CK G + ++ M +R PDKI+Y+TL++G
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
+ G + A+ I KEM + G E+D ++L+ G+C ++ + DA + +M +
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC-----KEGRVIDAERALREMLRAG 480
Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
D TY +++ K L GH+P +T+N ++ LC G++ A
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 426 LLLFLMYEHAKIPSRTSYDMLI 447
+LL M +P +Y+ L+
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLL 562
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 138/278 (49%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K L E + ++K T V ++ L+ AL N+ + A F E GL PN
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
F+ +I + + ++ M G P++ + LVN CK+G L A ++D M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
R G +P+ TY L+ G C G VE A E+ + +G++ D ++A++ G CK GR
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
+A L E + G+ P+ VT+ + + +CK+G G LLK M+ +P ++Y+ L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
LNGL K G+++ A + M+ G D+ N+LL G
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 183/402 (45%), Gaps = 9/402 (2%)
Query: 57 FVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYG 115
+DR+ K +P + I G +V FN L+ A K F E +
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
L P +F+ +I YC + E ++ M + P+V T++ L+N+LCK ++ A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
+ D+M + G PN + L+ G G ++ E + + GL+PD+ Y +++GF
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDK 295
CK G A +++ I RG+ P+ +T+ TL +G+C+ G + + K M + D+
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 296 ISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAY 355
+ +S L+ G+ K G++ A +EM+R G + D+ ++ C K + +
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQT-----GF 505
Query: 356 QVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQAL 415
++ ++M V TY +++ L K + A + L + +G +P IT+N +++
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
Query: 416 CGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
K + E + SY ++ +LD+ K +
Sbjct: 566 HRHANSSKRYI---QKPEIGIVADLASYKSIVNELDRASKDH 604
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 212/443 (47%), Gaps = 31/443 (6%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
+++ L I F+ + +G + FN LL +V + FF+E S + +
Sbjct: 105 VQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDV 163
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
++F I+I+ C + ++ ++ + + G+ PNV +T L++ CK G +++A ++ +
Sbjct: 164 YSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
MG++G N +TY L+ GL G ++ +EM ++ DG+ P++YTY VM+ CK GR
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
+ +A ++ +E ERGV+ N+VT+NTL G C+E + ++ MK P+ I+Y+T
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC-----------MKSWEEK- 348
L++G GK+ A+S+ +++ G N L+ G C +K EE+
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 349 ------------------DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
D +E A Q+ M + V D TY ++I + +EA
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
+E P + +N +I C EG +AL LL M E P+ SY +I L
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Query: 451 DQLEKSYDACALYGAALKQGVIP 473
+ KS +A L + G+ P
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDP 546
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 176/344 (51%), Gaps = 5/344 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K +++ D+F + K G + + L+ L ++ + + + G+ PN +
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T++ ++ C +A +V D M + G N+ T+ L+ LC+ +L EA +V+DQM
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
G PN+ TYN L+ G C VG++ +A + ++K+ GL P + TY ++ GFC+ G +
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
+ A +++ E ERG+ P+ VT+ L + + + K + L M++ +PD +YS L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
++G G++ A +FK MV E +E + N+++ G C + + A ++ ++M
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR-----ALKLLKEM 504
Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
+K + +Y +I L K +K+ EA + I+ G P T
Sbjct: 505 EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 150/318 (47%), Gaps = 6/318 (1%)
Query: 158 FTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVK 217
+ +++NS +S L ++ ++M G P +N LL + + + N
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF-NEN 155
Query: 218 NDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
+ DVY++ ++ G C+ G ++ +LL E E G +PNVV + TL +G CK+G
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 278 KGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLL 337
K L M K + ++ +Y+ L+NGL K G + ++++M G + N ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 338 RGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI 397
LC + +DA+QVF++M ++ + TY +I L + K +EA +
Sbjct: 276 NQLC-----KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 398 EMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSY 457
G P IT+N +I CG GK+ KAL L + PS +Y++L++ + +
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 458 DACALYGAALKQGVIPQR 475
A + ++G+ P +
Sbjct: 391 GAAKMVKEMEERGIKPSK 408
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 193/393 (49%), Gaps = 8/393 (2%)
Query: 70 IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
I + + +++ G + ++ +N L+ ++ A+ + G P+ T S ++
Sbjct: 30 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 89
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
YC+ +A ++D M + GY P+ TFT L++ L + EA+ ++D+M + GC+PN
Sbjct: 90 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 149
Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
+ TY ++ GLC G ++ A+ +L ++ ++ DV + ++D CK ++A+ L
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 209
Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG 309
E +G+ PNVVT+++L + C G LL M ++ P+ ++++ L++ +K G
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 310 KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTD 369
K A + +M++ + D NSL+ G CM D L+ A Q+FE M K D
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM-----HDRLDKAKQMFEFMVSKDCFPD 324
Query: 370 PGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLF 429
TY +I+ K K+ ++ G + T+T+ +IQ L +G D A +
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 430 LMYEHAKIPSRTSYDMLITKL---DQLEKSYDA 459
M P +Y +L+ L +LEK+ +
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 185/370 (50%), Gaps = 5/370 (1%)
Query: 104 AVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVN 163
AV + G P++ TF+ +I N EA ++D M G PN+ T+ ++VN
Sbjct: 99 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 158
Query: 164 SLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKP 223
LCK G + A +L++M + ++ +N ++ LC V++A + ++ G++P
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 224 DVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLL 283
+V TY++++ C GR ++A +LL++ IE+ + PN+VTFN L + + KEG ++ L
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 284 KLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK 343
M KR+ PD +Y++L+NG ++ A +F+ MV D N+L++G C
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC-- 336
Query: 344 SWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIP 403
+ +ED ++F +M+ + V D TY +I+ L D A + G P
Sbjct: 337 ---KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 404 RTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
+T++ ++ LC GK++KAL + M + Y +I + + K D L+
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 464 GAALKQGVIP 473
+ +GV P
Sbjct: 454 CSLSLKGVKP 463
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 197/409 (48%), Gaps = 7/409 (1%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ + + + D + + G F L+ L + N+ AV G PN T+ +
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ C + D A +++ M +V F +++SLCK + +AL + +M G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
+PN+ TY+ L+ LC GR +A ++L ++ + P++ T+ A++D F K G+ EA
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
+L ++ I+R + P++ T+N+L NG+C K + + M ++C PD +Y+TL+ G
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
K ++ +F+EM G D +L++GL + + D ++A +VF++M
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL----FHDGD-CDNAQKVFKQMVSDG 390
Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKA 424
D TY I++ L K ++AL + ++ I I + +I+ +C GK+D
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKAL-EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
L + P+ +Y+ +I+ L +A AL + G +P
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 498
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 169/337 (50%), Gaps = 7/337 (2%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
FN ++ +L + A+ F E + G+ PN T+S +I C C+ + +A +++ M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
+ +PN+ TF L+++ K G+ EA ++ D M + P+I TYN L+ G C R++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
+A +M + + PD+ TY ++ GFCK R + EL E RG+ + VT+ TL
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
G +G + K M PD ++YS LL+GL GK+ A+ +F M + +
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
+D + +++ G+C + ++D + +F ++ K + TY +I L +
Sbjct: 428 LDIYIYTTMIEGMC-----KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 482
Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
EA L E G +P + T+N +I+A +G DKA
Sbjct: 483 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG--DKA 517
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 143/291 (49%), Gaps = 1/291 (0%)
Query: 32 FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
++ AS ++ ++ K NP + +D +K E + D + K + + +N
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 91 LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
L+ M + + A + F S P+ T++ +I+ +C + ++ M G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
+ T+T L+ L G A +V QM G P+I TY+ LL GLC G++E+A
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
E+ ++ +K D+Y YT +++G CK G+ ++ +L +GV PNVVT+NT+ +G
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
C + + LLK MK+ LPD +Y+TL+ L+ G + + +EM
Sbjct: 476 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 153/307 (49%), Gaps = 8/307 (2%)
Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
P++ F L++++ K + + + ++M R+G N+ TYN L+ C ++ A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
L + G +P + T +++++G+C R ++A+ L+++ +E G P+ +TF TL +G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
+ V L+ M +R C P+ ++Y ++NGL K G I A ++ +M E D +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
N+++ LC ++DA +F++M K + TY +I L + +A
Sbjct: 188 FNTIIDSLCKYRH-----VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL-- 450
L IE P +TFN +I A EGK +A L M + + P +Y+ LI
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 451 -DQLEKS 456
D+L+K+
Sbjct: 303 HDRLDKA 309
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 40/358 (11%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K + + +++F ++ G +V ++ L+ L A + S+ + PN
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TF+ +I + + F EA K+ D M P++ T+ L+N C RL +A ++ + M
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN----------------------- 218
C P++ TYN L+KG C RVE+ E+ + +
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 219 ------------DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
DG+ PD+ TY+ ++DG C G+ +A+E+ + + + ++ + T+
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
G CK G G L + + P+ ++Y+T+++GL ++ A ++ K+M G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
D N+L+R + D A ++ +M V D T G+V L G+
Sbjct: 497 LPDSGTYNTLIRA----HLRDGDKAASA-ELIREMRSCRFVGDASTIGLVANMLHDGR 549
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 5/165 (3%)
Query: 286 MKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSW 345
M K LP ++ LL+ + K K +S+ ++M R G + N L+ C +S
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 346 EEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRT 405
+ A + KM K T ++ GK+ +A+ + +EMG+ P T
Sbjct: 61 -----ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 115
Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
ITF +I L K +A+ L+ M + P+ +Y +++ L
Sbjct: 116 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 193/412 (46%), Gaps = 16/412 (3%)
Query: 50 RSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFS 109
++L RFVDR I++F + + + L+ L + AV
Sbjct: 195 KALCKLRFVDRA--------IEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLD 246
Query: 110 EASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSG 169
E S G +P+ ++++I C K D K++D MF G PN T+ L++ LC G
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 306
Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
+L +A+ +L++M C PN TY L+ GL R +A +L +++ G + + Y+
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
++ G K G++ EAM L + E+G PN+V ++ L +G C+EG P + +L M
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
CLP+ +YS+L+ G K G AV ++KEM + G ++ + L+ GLC
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR---- 482
Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAI---EMGHIPRTI 406
+++A V+ KM D Y +I+ L D AL H + E P +
Sbjct: 483 -VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541
Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYD 458
T+N ++ LC + I +A+ LL M + P + + + L + S D
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCD 593
Score = 168 bits (426), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 201/411 (48%), Gaps = 12/411 (2%)
Query: 70 IDIFDSIKKDGTNWSVS----DFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
++ +D + N ++S FN ++ AL L + A++ F P+ +T+
Sbjct: 168 LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCT 227
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ C + EA ++D M G P+ + +L++ LCK G L +++D M G
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
C PN TYN L+ GLC G++++A +L + + P+ TY +++G K R+ +A+
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
LL+ ERG N ++ L +G KEG + + L + M ++ C P+ + YS L++GL
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
+ GK A I M+ G + +SL++G + + L E+A QV+++M K
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKG-----FFKTGLCEEAVQVWKEMDKTG 462
Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
+ Y ++I L + EA++ + +G P T+ ++++I+ LCG G +D AL
Sbjct: 463 CSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAAL 522
Query: 426 LLLFLMY---EHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
L M E P +Y++L+ L + A L + L +G P
Sbjct: 523 KLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDP 573
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 172/389 (44%), Gaps = 46/389 (11%)
Query: 100 EQETAVKFFSEASSYG-LAPNSWTFSIMIRCYCNKNDF-----------FEARKVIDCMF 147
E + K F A G T S MI Y N DF E R +I+ F
Sbjct: 56 EAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSF 115
Query: 148 -------DNGYHPN------------------VTTFTILVNSLCKSGRLKEALE----VL 178
+ P+ V +F ++N + G LE V+
Sbjct: 116 IVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVV 175
Query: 179 DQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
+ + PN ++N ++K LC + V+ A E+ + PD YTY +MDG CK
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235
Query: 239 GRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
R +EA+ LL+E G +P+ V +N L +G CK+G + L+ M + C+P++++Y
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
+TL++GL GK+ AVS+ + MV ++ +L+ GL ++ DA ++
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV-----KQRRATDAVRLL 350
Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
M ++ + Y ++I L K K +EA+ E G P + ++ ++ LC E
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410
Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
GK ++A +L M +P+ +Y L+
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLM 439
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 222/474 (46%), Gaps = 48/474 (10%)
Query: 36 SLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMAL 95
S + A S D +EN +++ + +K L + I +F + K S+ +F+ LL A+
Sbjct: 33 SFAGASSDDCREN----LSRKVLQDLK---LDDAIGLFGDMVKSRPFPSIVEFSKLLSAI 85
Query: 96 VMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK---------------------- 133
+N+ + + + + G++ N +T+SI I +C +
Sbjct: 86 AKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSI 145
Query: 134 -------------NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
N EA ++D M + GY P+ TFT LV+ L + + EA+ ++++
Sbjct: 146 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 205
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M GC+P++ TY ++ GLC G + A +L ++ ++ DV Y ++DG CK
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
++A +L N+ +G+ P+V T+N L + C G LL M ++N PD + ++
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEV-DERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
L++ +K GK+ A ++ EMV+ D N+L++G C + +E+ +VF
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC-----KYKRVEEGMEVFR 380
Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
+M+++ V + TY +I + + D A + + G P +T+N ++ LC G
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
++ AL++ M + +Y +I L + K D L+ + +GV P
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 178/359 (49%), Gaps = 9/359 (2%)
Query: 70 IDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
+++ + ++K V +N ++ L + A F++ + G+ P+ +T++ +I C
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRI-GCKP 188
CN + +A +++ M + +P++ F L+++ K G+L EA ++ D+M + C P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 189 NIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELL 248
++ YN L+KG C RVEE E+ + GL + TYT ++ GF + + A +
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 249 NEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKW 308
+ + GV P+++T+N L +G C G + + + M+KR+ D ++Y+T++ L K
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
GK+ +F + G + + +++ G C K L E+A +F +M + +
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC-----RKGLKEEADALFVEMKEDGPLP 529
Query: 369 DPGTYGIVIRT-LGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
+ GTY +IR L G + A + + G TF V L +G++DK+ L
Sbjct: 530 NSGTYNTLIRARLRDGDEAASAEL-IKEMRSCGFAGDASTFGLVTNML-HDGRLDKSFL 586
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 136/276 (49%), Gaps = 2/276 (0%)
Query: 32 FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNW-SVSDFN 89
++ AS ++ L+ NP + +D +K L E ++D + K + V +N
Sbjct: 301 WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYN 360
Query: 90 DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDN 149
L+ E ++ F E S GL N+ T++ +I + D A+ V M +
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 420
Query: 150 GYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA 209
G HP++ T+ IL++ LC +G ++ AL V + M + K +I TY +++ LC G+VE+
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 210 YEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNG 269
+++ ++ G+KP+V TYT +M GFC+ G EA L E E G PN T+NTL
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
++G L+K M+ D ++ + N L
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
KA +++ D+F S+ G +V + ++ +E A F E G PNS
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
T++ +IR D + ++I M G+ + +TF ++ N L GRL ++
Sbjct: 533 TYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKSF 585
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 204/441 (46%), Gaps = 31/441 (7%)
Query: 63 ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
A E + + + G+ SV +N +L L + + + A+K F E APN T
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLST 379
Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
++I+I C A ++ D M G PNV T I+V+ LCKS +L EA + ++M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
C P+ T+ L+ GL VGRV++AY++ + + + + YT+++ F GR
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
+ ++ + I + +P++ NT + K G P KG + + +K R +PD SYS L+
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC----------------MKSWE 346
+GL+K G +F M G +D R N ++ G C K +E
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 347 EK--------------DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
D L++AY +FE+ K + Y +I GK + DEA +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
L ++ G P T+N+++ AL +I++AL+ M E P++ +Y +LI L +
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 453 LEKSYDACALYGAALKQGVIP 473
+ K A + KQG+ P
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKP 760
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 192/445 (43%), Gaps = 40/445 (8%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
+A L ++ DS++K G +V N ++ L + + A F E P+
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TF +I +A KV + M D+ N +T L+ + GR ++ ++ M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 182 GRIGCKPNIQ-----------------------------------TYNCLLKGLCYVGRV 206
C P++Q +Y+ L+ GL G
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
E YE+ ++K G D Y V+DGFCK G+ N+A +LL E +G P VVT+ ++
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
+G K + L + K + + + YS+L++G K G+I A I +E+++ G
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
+ NSLL L +K+ E + +A F+ M + + TYGI+I L K +K
Sbjct: 689 TPNLYTWNSLLDAL-VKAEE----INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
++A + + G P TI++ +I L G I +A L + +P Y+ +
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 447 ITKLDQLEKSYDACALYGAALKQGV 471
I L ++ DA +L+ ++G+
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 197/447 (44%), Gaps = 41/447 (9%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K + E + +F+ +KKD ++S +N L+ L + +TA + GL PN
Sbjct: 355 KMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVR 413
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T +IM+ C EA + + M P+ TF L++ L K GR+ +A +V ++M
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYE------------------------------ 211
C+ N Y L+K GR E+ ++
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533
Query: 212 -----MLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
M +K PD +Y+ ++ G K G +NE EL E+G + +N +
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
+G+CK G K LL+ MK + P ++Y ++++GL K ++ A +F+E
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
E++ + +SL+ G + + +++AY + E++ +K + T+ ++ L K ++
Sbjct: 654 ELNVVIYSSLIDG-----FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
+EAL+ E+ P +T+ +I LC K +KA + M + PS SY +
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
I+ L + +A AL+ G +P
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVP 795
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 186/447 (41%), Gaps = 24/447 (5%)
Query: 45 LKENPRSLQAQRFVDRIKASP-----------LKERIDIFDSIKKDGTNWSVSDFN---- 89
LK+ R+++ R+ +R P + R FD++ + SV+ F
Sbjct: 75 LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVN 134
Query: 90 ---DLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCM 146
++++ V N+ + P ++ +I + N + M
Sbjct: 135 TCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM 194
Query: 147 FDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRV 206
+ GY P V FT L+ K GR+ AL +LD+M +I YN + VG+V
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254
Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
+ A++ ++ +GLKPD TYT+++ CK R +EA+E+ + P +NT+
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314
Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
GY G + LL+ + + +P I+Y+ +L L K GK+ A+ +F+EM +
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA- 373
Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
+ N L+ LC L+ A+++ + M K + T I++ L K +K
Sbjct: 374 APNLSTYNILIDMLC-----RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
DEA P ITF ++I L G++D A + M + + Y L
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
I + D +Y + Q P
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSP 515
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 6/329 (1%)
Query: 63 ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
P K R +F+ IK ++ L+ L+ + F G ++
Sbjct: 531 GEPEKGRA-MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 123 FSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMG 182
++I+I +C +A ++++ M G+ P V T+ +++ L K RL EA + ++
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 183 RIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSN 242
+ N+ Y+ L+ G VGR++EAY +L + GL P++YT+ +++D K N
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 243 EAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLL 302
EA+ E TPN VT+ L NG CK K + M+K+ P ISY+T++
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
Query: 303 NGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMT 362
+GL K G I A ++F G D N+++ GL + DA+ +FE+
Sbjct: 770 SGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL-----SNGNRAMDAFSLFEETR 824
Query: 363 KKVSVTDPGTYGIVIRTLGKGKKTDEALI 391
++ T +++ TL K ++A I
Sbjct: 825 RRGLPIHNKTCVVLLDTLHKNDCLEQAAI 853
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 203/411 (49%), Gaps = 44/411 (10%)
Query: 78 KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
K G ++V + N LL L E AV E L P+ ++++ +IR +C +
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194
Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCK---------- 187
+A ++ + M +G ++ T+ IL+++ CK+G++ EA+ L +M +G +
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 188 -------------------------PNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
P TYN L++G C +G+++EA E+ + G++
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
P+VYTYT ++DG C VG++ EA++LLN IE+ PN VT+N + N CK+G V +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM--NSLLRGL 340
++LMKKR PD I+Y+ LL GL G + A + M++ D ++ N+L+ GL
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 341 CMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMG 400
C +++ L A +++ + +K+ D T I++ + K ++A+ L I
Sbjct: 435 C-----KENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM-ELWKQISDS 488
Query: 401 HIPR-TITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
I R + T+ +I C G ++ A LL M PS Y+ L++ L
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 189/400 (47%), Gaps = 8/400 (2%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
LK + +F G++ + + N+L+ LV E A F+ + N + S
Sbjct: 54 LKNAVSVFQQAVDSGSSLAFAG-NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSG 112
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ CY A V+ M G+ NV IL+ LC++ +A+ +L +M R
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
P++ +YN +++G C +E+A E+ +K G + T+ ++D FCK G+ +EAM
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
L E G+ ++V + +L G+C G +G L + +R P I+Y+TL+ G
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
K G+++ A IF+ M+ G + L+ GLC ++A Q+ M +K
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT-----KEALQLLNLMIEKD 347
Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
+ TY I+I L K +A+ + + P IT+N ++ LC +G +D+A
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 426 LLLFLMYEHAKI--PSRTSYDMLITKLDQLEKSYDACALY 463
LL+LM + + P SY+ LI L + + + A +Y
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 189/416 (45%), Gaps = 11/416 (2%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
KA + E + +K G + + L+ E + F E G +P +
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T++ +IR +C EA ++ + M + G PNV T+T L++ LC G+ KEAL++L+ M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
+PN TYN ++ LC G V +A E++ +K +PD TY ++ G C G
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 242 NEAMELLNEAIERG--VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
+EA +LL ++ P+V+++N L +G CKE + + + L+ ++ D+++ +
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 300 TLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFE 359
LLN LK G + A+ ++K++ + +++ G C + +L A +
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC-----KTGMLNVAKGLLC 518
Query: 360 KMTKKVSVTDPGT--YGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
KM +VS P Y ++ +L K D+A + P ++FN +I
Sbjct: 519 KM--RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
G I A LL M P +Y LI + +L +A + + + G P
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 171/389 (43%), Gaps = 42/389 (10%)
Query: 72 IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
+FD + + G + +N L+ L + + A + F G+ PN +T++ +I C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 132 NKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQ 191
EA ++++ M + PN T+ I++N LCK G + +A+E+++ M + +P+
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 192 TYNCLLKGLCYVGRVEEAYEMLMNVKNDG--LKPDVYTYTAVMDGFCK------------ 237
TYN LL GLC G ++EA ++L + D PDV +Y A++ G CK
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 238 -----------------------VGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEG 274
G N+AMEL + + + N T+ + +G+CK G
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Query: 275 TPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMN 334
GLL M+ P Y+ LL+ L K G + A +F+EM R D N
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568
Query: 335 SLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLH 394
++ G S + D+ + A + M++ D TY +I K DEA+
Sbjct: 569 IMIDG----SLKAGDI-KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623
Query: 395 HAIEMGHIPRTITFNNVIQALCGEGKIDK 423
++ G P ++V++ +G+ DK
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDK 652
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 6/318 (1%)
Query: 47 ENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVM---LNEQE 102
E P ++ ++++ K + + ++I + +KK T +N LL L L+E
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
+ + SSY P+ +++ +I C +N +A + D + + + T IL+
Sbjct: 408 KLLYLMLKDSSY-TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466
Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK 222
NS K+G + +A+E+ Q+ N TY ++ G C G + A +L ++ L+
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526
Query: 223 PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGL 282
P V+ Y ++ CK G ++A L E P+VV+FN + +G K G L
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Query: 283 LKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCM 342
L M + PD +YS L+N LK G + A+S F +MV GFE D + +S+L+ C+
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK-YCI 645
Query: 343 KSWEEKDLLEDAYQVFEK 360
E L E ++ +K
Sbjct: 646 SQGETDKLTELVKKLVDK 663
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 126/243 (51%), Gaps = 2/243 (0%)
Query: 62 KASPLKERIDIFDS-IKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
K + L + +DI+D ++K G V+ N LL + + + A++ + + S + NS
Sbjct: 436 KENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
T++ MI +C A+ ++ M + P+V + L++SLCK G L +A + ++
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M R P++ ++N ++ G G ++ A +L+ + GL PD++TY+ +++ F K+G
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
+EA+ ++ ++ G P+ +++ +G K L+K + ++ + DK T
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCT 674
Query: 301 LLN 303
+++
Sbjct: 675 VMD 677
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 6/235 (2%)
Query: 240 RSNE-AMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISY 298
R++E A + +E N V+ + L Y + G+L LM KR + ++
Sbjct: 86 RNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNH 145
Query: 299 STLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVF 358
+ LL GL + + AVS+ +EM R D N+++RG C E LE A ++
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC-----EGKELEKALELA 200
Query: 359 EKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGE 418
+M T+GI+I K K DEA+ L MG + + ++I+ C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 419 GKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
G++D+ L + E P +Y+ LI +L + +A ++ +++GV P
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 79/162 (48%)
Query: 116 LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
L P+ + ++ ++ C + +A ++ + M + P+V +F I+++ K+G +K A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 176 EVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGF 235
+L M R G P++ TY+ L+ +G ++EA + + G +PD + +V+
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Query: 236 CKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPM 277
G +++ EL+ + +++ + + T+ + C M
Sbjct: 645 ISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANM 686
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 202/422 (47%), Gaps = 11/422 (2%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
++ +++ ++IF + G N SV N +L ++V E + F E + P+
Sbjct: 134 LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDV 193
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
TF+I+I C + F ++ ++ M +GY P + T+ +++ CK GR K A+E+LD
Sbjct: 194 ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
M G ++ TYN L+ LC R+ + Y +L +++ + P+ TY +++GF G+
Sbjct: 254 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
A +LLNE + G++PN VTFN L +G+ EG + + + +M+ + P ++SY
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373
Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
LL+GL K + A + M R G V ++ GLC + L++A + +
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC-----KNGFLDEAVVLLNE 428
Query: 361 MTKKVSVTDPGTYGIVIR---TLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
M+K D TY +I +G+ K E + ++ +G P I ++ +I C
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY---RVGLSPNGIIYSTLIYNCCR 485
Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQRKP 477
G + +A+ + M ++++L+T L + K +A G++P
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545
Query: 478 QD 479
D
Sbjct: 546 FD 547
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 205/479 (42%), Gaps = 44/479 (9%)
Query: 35 ASLSTAESLDLKENPRSLQAQRFVD-RIKASPLKERIDIFDSIKKDGTNWSVSDFNDLLM 93
AS E L +P + +D I KE + +F ++ G S + LL
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376
Query: 94 ALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF-EARKVIDCMFDNGYH 152
L E + A F+ G+ T++ MI C KN F EA +++ M +G
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC-KNGFLDEAVVLLNEMSKDGID 435
Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
P++ T++ L+N CK GR K A E++ ++ R+G PN Y+ L+ C +G ++EA +
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495
Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
+ +G D +T+ ++ CK G+ EA E + G+ PN V+F+ L NGY
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555
Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
G +K + M K P +Y +LL GL K G +R A K + VD M
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615
Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
N+LL +C KS L A +F +M ++ + D TY +I L + KT A++
Sbjct: 616 YNTLLTAMC-KSGN----LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 670
Query: 393 LHHA------------------------------------IEMGHIPRTITFNNVIQALC 416
A +GH P +T N +I
Sbjct: 671 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 730
Query: 417 GEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
GKI+K LL M P+ T+Y++L+ + + + LY + + G++P +
Sbjct: 731 RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 789
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 182/381 (47%), Gaps = 11/381 (2%)
Query: 98 LNEQETAVKFFSEASSYGLA-PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVT 156
L +++ F + ++Y L N + I+IR Y + ++ ++ M G++P+V
Sbjct: 100 LMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY 159
Query: 157 TFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNV 216
T ++ S+ KSG L +M + P++ T+N L+ LC G E++ ++ +
Sbjct: 160 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 219
Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTP 276
+ G P + TY V+ +CK GR A+ELL+ +GV +V T+N L + C+
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279
Query: 277 MKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSL 336
KG LL+ M+KR P++++Y+TL+NG GK+ A + EM+ FG + N+L
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339
Query: 337 LRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHA 396
+ G E + ++A ++F M K +YG+++ L K + D A
Sbjct: 340 IDG----HISEGN-FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Query: 397 IEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKS 456
G IT+ +I LC G +D+A++LL M + P +Y LI ++ +
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454
Query: 457 YDA----CALYGAALK-QGVI 472
A C +Y L G+I
Sbjct: 455 KTAKEIVCRIYRVGLSPNGII 475
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 195/474 (41%), Gaps = 66/474 (13%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
LKE I I++++ +G FN L+ +L + A +F +S G+ PN+ +F
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
+I Y N + +A V D M G+HP T+ L+ LCK G L+EA + L + +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
+ YN LL +C G + +A + + + PD YTYT+++ G C+ G++ A+
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 246 ELLNEAIERG------------------------------------VTPNVVTFNTLFNG 269
EA RG TP++VT N + +G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728
Query: 270 YCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
Y + G K LL M +N P+ +Y+ LL+G K + + +++ ++ G D
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 330 ERMMNSLLRGLCMKSWEEKDL------------------------------LEDAYQVFE 359
+ +SL+ G+C + E L + A+ + +
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848
Query: 360 KMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEG 419
MT D T ++ L + + E+ + LH + G P + + +I LC G
Sbjct: 849 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908
Query: 420 KIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
I A ++ M H P + ++ L + K+ +A L LK ++P
Sbjct: 909 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 962
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 193/482 (40%), Gaps = 76/482 (15%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS----- 120
L E + + + + KDG + + ++ L+ + +TA + GL+PN
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 121 ------------------------------WTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
+TF++++ C EA + + CM +G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
PN +F L+N SG +A V D+M ++G P TY LLKGLC G + EA
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
+ L ++ D Y ++ CK G +A+ L E ++R + P+ T+ +L +G
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 271 CKEGTPMKGVGLLKLMKKR-NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVD 329
C++G + + K + R N LP+K+ Y+ ++G+ K G+ + + ++M G D
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718
Query: 330 ERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEA 389
N+++ G + +E + +M + + TY I++ K K +
Sbjct: 719 IVTTNAMIDG-----YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773
Query: 390 LIHLHHAIEMGHIPRTIT-----------------------------------FNNVIQA 414
+ I G +P +T FN +I
Sbjct: 774 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833
Query: 415 LCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQ 474
C G+I+ A L+ +M + + D +++ L++ + ++ + KQG+ P+
Sbjct: 834 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893
Query: 475 RK 476
+
Sbjct: 894 SR 895
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 170/404 (42%), Gaps = 51/404 (12%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
+N LL A+ AV F E + P+S+T++ +I C K + VI +F
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK-----GKTVIAILF 670
Query: 148 D------NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLC 201
PN +T V+ + K+G+ K + +QM +G P+I T N ++ G
Sbjct: 671 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 730
Query: 202 YVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVV 261
+G++E+ ++L + N P++ TY ++ G+ K + + L I G+ P+ +
Sbjct: 731 RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL 790
Query: 262 TFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
T ++L G C+ G+ +LK R D+ +++ L++ G+I A + K M
Sbjct: 791 TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 850
Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKK----------------V 365
G +D+ ++++ L +++ V +M+K+
Sbjct: 851 TSLGISLDKDTCDAMVSVL-----NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905
Query: 366 SVTDPGTYGIV-------------------IRTLGKGKKTDEALIHLHHAIEMGHIPRTI 406
V D T +V +R L K K DEA + L ++M +P
Sbjct: 906 RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965
Query: 407 TFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
+F ++ C G + +AL L +M SY++LIT L
Sbjct: 966 SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 120/252 (47%)
Query: 89 NDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFD 148
+ L++ + N E +K G+ + +TF+++I C + A ++ M
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852
Query: 149 NGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEE 208
G + T +V+ L ++ R +E+ VL +M + G P + Y L+ GLC VG ++
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912
Query: 209 AYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFN 268
A+ + + + P +A++ K G+++EA LL ++ + P + +F TL +
Sbjct: 913 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 972
Query: 269 GYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEV 328
CK G ++ + L +M D +SY+ L+ GL G + A +++EM GF
Sbjct: 973 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032
Query: 329 DERMMNSLLRGL 340
+ +L+RGL
Sbjct: 1033 NATTYKALIRGL 1044
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 146/348 (41%), Gaps = 7/348 (2%)
Query: 35 ASLSTAESLD-LKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLL 92
A + E +D L P + +D + +++ D+ + +++ +N LL
Sbjct: 702 AGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 761
Query: 93 MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
+ T+ + G+ P+ T ++ C N K++ G
Sbjct: 762 HGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVE 821
Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
+ TF +L++ C +G + A +++ M +G + T + ++ L R +E+ +
Sbjct: 822 VDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 881
Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
L + G+ P+ Y +++G C+VG A + E I + P V + + K
Sbjct: 882 LHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 941
Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
G + LL+ M K +P S++TL++ K G + A+ + M G ++D
Sbjct: 942 CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1001
Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTL 380
N L+ GLC K + A++++E+M + + TY +IR L
Sbjct: 1002 YNVLITGLCAKGD-----MALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 3/241 (1%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
FN L+ E A +S G++ + T M+ + F E+R V+ M
Sbjct: 827 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM-GRIGCKPNIQTYNCLLKGLCYVGRV 206
G P + L+N LC+ G +K A V ++M C PN+ + +++ L G+
Sbjct: 887 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKA 945
Query: 207 EEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
+EA +L + L P + ++T +M CK G EA+EL G+ ++V++N L
Sbjct: 946 DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1005
Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL-KWGKIRPAVSIFKEMVRFG 325
G C +G L + MK L + +Y L+ GLL + A I K+++ G
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARG 1065
Query: 326 F 326
F
Sbjct: 1066 F 1066
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 184/370 (49%), Gaps = 5/370 (1%)
Query: 78 KDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFF 137
K G + N LL N AV + G P++ TF+ +I N
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 138 EARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLL 197
EA +ID M G P++ T+ +VN LCK G AL +L++M + N+ Y+ ++
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 198 KGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVT 257
LC ++A + ++N G++P+V TY++++ C GR ++A LL++ IER +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 258 PNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSI 317
PN+VTF+ L + + K+G +K L + M KR+ P+ +YS+L+NG ++ A +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 318 FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVI 377
+ M+R + N+L+ G C +K + ++F +M+++ V + TY +I
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM-----ELFREMSQRGLVGNTVTYTTLI 435
Query: 378 RTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKI 437
+ + D A + + +G P +T+N ++ LC GK+ KA+++ +
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 438 PSRTSYDMLI 447
P +Y+++I
Sbjct: 496 PDIYTYNIMI 505
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 180/355 (50%), Gaps = 5/355 (1%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ + + + D + + G F L+ L + N+ AV G P+ T+
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ C + D A +++ M NV ++ +++SLCK +AL + +M G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
+PN+ TY+ L+ LC GR +A +L ++ + P++ T++A++D F K G+ +A
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
+L E I+R + PN+ T+++L NG+C + +L+LM +++CLP+ ++Y+TL+NG
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
K ++ + +F+EM + G + +L+ G ++ +D ++A VF++M
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF----FQARDC-DNAQMVFKQMVSVG 458
Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
+ TY I++ L K K +A++ + P T+N +I+ +C GK
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 157/321 (48%), Gaps = 5/321 (1%)
Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
P++ F+ L++++ K + + ++M +G N+ TYN L+ C R+ A +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
L + G +PD+ T ++++GFC R ++A+ L+++ +E G P+ VTF TL +G
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 273 EGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERM 332
+ V L+ M +R C PD ++Y ++NGL K G A+++ +M E + +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 333 MNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIH 392
++++ LC E +DA +F +M K + TY +I L + +A
Sbjct: 256 YSTVIDSLCKYRHE-----DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRL 310
Query: 393 LHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQ 452
L IE P +TF+ +I A +GK+ KA L M + + P+ +Y LI
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
Query: 453 LEKSYDACALYGAALKQGVIP 473
L++ +A + +++ +P
Sbjct: 371 LDRLGEAKQMLELMIRKDCLP 391
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 53/111 (47%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
KA + + +++F + + G + + L+ + + A F + S G+ PN
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLK 172
T++I++ C +A V + + + P++ T+ I++ +CK+G+ K
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 198/412 (48%), Gaps = 5/412 (1%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
+ S + + + + K G S+ + LL AV + G P++
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TF+ +I N EA ++D M G PN+ T+ ++VN LCK G AL +L++M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
+ ++ +N ++ LC V++A + ++ G++P+V TY++++ C GR
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
++A +LL++ IE+ + PN+VTFN L + + KEG ++ L M KR+ PD +Y++L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
+NG ++ A +F+ MV D N+L++G C + +ED ++F +M
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC-----KSKRVEDGTELFREM 426
Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
+ + V D TY +I+ L D A + G P +T++ ++ LC GK+
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
+KAL + M + Y +I + + K D L+ + +GV P
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 182/375 (48%), Gaps = 8/375 (2%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
+N L+ ++ A+ + G P+ T S ++ YC+ +A ++D M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
+ GY P+ TFT L++ L + EA+ ++D+M + GC+PN+ TY ++ GLC G +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
A +L ++ ++ DV + ++D CK ++A+ L E +G+ PNVVT+++L
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
+ C G LL M ++ P+ ++++ L++ +K GK A ++ +M++ +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
D NSL+ G CM D L+ A Q+FE M K D TY +I+ K K+ +
Sbjct: 363 PDIFTYNSLVNGFCM-----HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLI 447
+ G + T+T+ +IQ L +G D A + M P +Y +L+
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 448 TKL---DQLEKSYDA 459
L +LEK+ +
Sbjct: 478 DGLCNNGKLEKALEV 492
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 198/409 (48%), Gaps = 7/409 (1%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
+ + + + D + + G F L+ L + N+ AV G PN T+ +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
++ C + D A +++ M +V F +++SLCK + +AL + +M G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
+PN+ TY+ L+ LC GR +A ++L ++ + P++ T+ A++D F K G+ EA
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
+L ++ I+R + P++ T+N+L NG+C K + + M ++C PD ++Y+TL+ G
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 306 LKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKV 365
K ++ +F+EM G D +L++GL + + D ++A +VF++M
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL----FHDGD-CDNAQKVFKQMVSDG 465
Query: 366 SVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTI-TFNNVIQALCGEGKIDKA 424
D TY I++ L K ++AL + ++ I I + +I+ +C GK+D
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKAL-EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 425 LLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
L + P+ +Y+ +I+ L +A AL + G +P
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 573
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 7/337 (2%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMF 147
FN ++ +L + A+ F E + G+ PN T+S +I C C+ + +A +++ M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 148 DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVE 207
+ +PN+ TF L+++ K G+ EA ++ D M + P+I TYN L+ G C R++
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 208 EAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLF 267
+A +M + + PDV TY ++ GFCK R + EL E RG+ + VT+ TL
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 268 NGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFE 327
G +G + K M PD ++YS LL+GL GK+ A+ +F M + +
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 328 VDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTD 387
+D + +++ G+C + ++D + +F ++ K + TY +I L +
Sbjct: 503 LDIYIYTTMIEGMC-----KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 388 EALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKA 424
EA L E G +P + T+N +I+A +G DKA
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG--DKA 592
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 144/291 (49%), Gaps = 1/291 (0%)
Query: 32 FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
++ AS ++ ++ K NP + +D +K E ++D + K + + +N
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 91 LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
L+ M + + A + F S P+ T++ +I+ +C + ++ M G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
+ T+T L+ L G A +V QM G P+I TY+ LL GLC G++E+A
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
E+ ++ +K D+Y YT +++G CK G+ ++ +L +GV PNVVT+NT+ +G
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEM 321
C + + LLK MK+ LP+ +Y+TL+ L+ G + + +EM
Sbjct: 551 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 40/358 (11%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K + + +++F ++ G +V ++ L+ L A + S+ + PN
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
TF+ +I + + F EA K+ D M P++ T+ LVN C RL +A ++ + M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKN----------------------- 218
C P++ TYN L+KG C RVE+ E+ + +
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 219 ------------DGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
DG+ PD+ TY+ ++DG C G+ +A+E+ + + + ++ + T+
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
G CK G G L + + P+ ++Y+T+++GL ++ A ++ K+M G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
+ N+L+R + D A ++ +M V D T G+V L G+
Sbjct: 572 LPNSGTYNTLIRA----HLRDGDKAASA-ELIREMRSCRFVGDASTIGLVANMLHDGR 624
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 144/304 (47%), Gaps = 5/304 (1%)
Query: 170 RLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYT 229
+L +A+ + M + P+I +N LL + + + + + ++ + +YTY
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 230 AVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKR 289
+++ FC+ + + A+ LL + ++ G P++VT ++L NGYC V L+ M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 290 NCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKD 349
PD I+++TL++GL K AV++ MV+ G + + ++ GLC + + D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG--DTD 242
Query: 350 LLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFN 409
L A + KM D + +I +L K + D+AL G P +T++
Sbjct: 243 L---ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 410 NVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQ 469
++I LC G+ A LL M E P+ +++ LI + K +A LY +K+
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 470 GVIP 473
+ P
Sbjct: 360 SIDP 363
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 132/308 (42%), Gaps = 28/308 (9%)
Query: 188 PNIQTYNCLLKGLCYVGRV-----EEAYEMLMNVKND-------GL---------KPDVY 226
P I + L G+CY GR + E+L N +D GL P +
Sbjct: 27 PRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIV 86
Query: 227 TYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLM 286
+ ++ K+ + + + L + + + T+N L N +C+ + LL M
Sbjct: 87 EFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146
Query: 287 KKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWE 346
K P ++ S+LLNG +I AV++ +MV G+ D +L+ GL + +
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 347 EKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHI-PRT 405
+A + ++M ++ + TYG+V+ L K TD AL +L + +E I
Sbjct: 207 -----SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL-NLLNKMEAAKIEADV 260
Query: 406 ITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGA 465
+ FN +I +LC +D AL L M P+ +Y LI+ L + DA L
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 466 ALKQGVIP 473
+++ + P
Sbjct: 321 MIEKKINP 328
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
KA + + D+F S+ G +V +N ++ L + A + G PNS
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEAL 175
T++ +IR + D + ++I M + + +T ++ N L GRL ++
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKSF 629
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 214/476 (44%), Gaps = 41/476 (8%)
Query: 33 AAASLSTAESLDLKENPRSLQAQRFVDRIKASPLKERIDIFDSIKKDGTNWSVSDFNDLL 92
A ASLS +++ L + + + K +D+F + G S + N LL
Sbjct: 187 AMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILL 246
Query: 93 MALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYH 152
+LV NE + + F + G++P+ + F+ I +C EA K+ M + G
Sbjct: 247 TSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA 305
Query: 153 PNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEM 212
PNV TF +++ L GR EA ++M G +P + TY+ L+KGL R+ +AY +
Sbjct: 306 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 365
Query: 213 LMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK 272
L + G P+V Y ++D F + G N+A+E+ + + +G++ T+NTL GYCK
Sbjct: 366 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 425
Query: 273 EGTPMKGVGLLKLMKK-----------------------------------RNCLPDKIS 297
G LLK M RN P
Sbjct: 426 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 485
Query: 298 YSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQV 357
+TL++GL K GK A+ ++ + + GF VD R N+LL GLC E L++A+++
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC-----EAGKLDEAFRI 540
Query: 358 FEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCG 417
+++ + V D +Y +I KK DEA + L ++ G P T++ +I L
Sbjct: 541 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 600
Query: 418 EGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
K+++A+ + +P +Y ++I + E++ + + + + V P
Sbjct: 601 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 132/249 (53%)
Query: 66 LKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSI 125
L E D + K G ++ L+ L +N+ E A++F+ + G+ P+ +T+S+
Sbjct: 569 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 628
Query: 126 MIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIG 185
MI C E ++ D M PN + L+ + C+SGRL ALE+ + M G
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 688
Query: 186 CKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAM 245
PN TY L+KG+ + RVEEA + ++ +GL+P+V+ YTA++DG+ K+G+ +
Sbjct: 689 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 748
Query: 246 ELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGL 305
LL E + V PN +T+ + GY ++G + LL M+++ +PD I+Y + G
Sbjct: 749 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 808
Query: 306 LKWGKIRPA 314
LK G + A
Sbjct: 809 LKQGGVLEA 817
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 199/447 (44%), Gaps = 40/447 (8%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K ++E + +F +++ G +V FN ++ L M + A F + G+ P
Sbjct: 285 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 344
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T+SI+++ +A V+ M G+ PNV + L++S ++G L +A+E+ D M
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV---------- 231
G TYN L+KG C G+ + A +L + + G + ++T+V
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464
Query: 232 -------------------------MDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTL 266
+ G CK G+ ++A+EL + + +G + T N L
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524
Query: 267 FNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGF 326
+G C+ G + + K + R C+ D++SY+TL++G K+ A EMV+ G
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584
Query: 327 EVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKT 386
+ D + L+ GL + +E+A Q ++ + + D TY ++I K ++T
Sbjct: 585 KPDNYTYSILICGLF-----NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 639
Query: 387 DEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDML 446
+E + P T+ +N++I+A C G++ AL L M P+ +Y L
Sbjct: 640 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 699
Query: 447 ITKLDQLEKSYDACALYGAALKQGVIP 473
I + + + +A L+ +G+ P
Sbjct: 700 IKGMSIISRVEEAKLLFEEMRMEGLEP 726
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 133/278 (47%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
+A L E I I G +N L+ + + A F E GL P+++
Sbjct: 530 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 589
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T+SI+I N N EA + D NG P+V T++++++ CK+ R +E E D+M
Sbjct: 590 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 649
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
+PN YN L++ C GR+ A E+ ++K+ G+ P+ TYT+++ G + R
Sbjct: 650 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 709
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
EA L E G+ PNV + L +GY K G +K LL+ M +N P+KI+Y+ +
Sbjct: 710 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 769
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRG 339
+ G + G + A + EM G D + G
Sbjct: 770 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 807
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 158/335 (47%), Gaps = 5/335 (1%)
Query: 91 LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
L+ L + A++ + + + G ++ T + ++ C EA ++ + G
Sbjct: 489 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 548
Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAY 210
+ ++ L++ C +L EA LD+M + G KP+ TY+ L+ GL + +VEEA
Sbjct: 549 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 608
Query: 211 EMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGY 270
+ + K +G+ PDVYTY+ ++DG CK R+ E E +E + + V PN V +N L Y
Sbjct: 609 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 668
Query: 271 CKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDE 330
C+ G + L + MK + P+ +Y++L+ G+ ++ A +F+EM G E +
Sbjct: 669 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 728
Query: 331 RMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEAL 390
+L+ G + + + + +M K + TY ++I + EA
Sbjct: 729 FHYTALIDG-----YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 783
Query: 391 IHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKAL 425
L+ E G +P +IT+ I +G + +A
Sbjct: 784 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 818
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 178/413 (43%), Gaps = 5/413 (1%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
I+A L + I+I D + G + + S +N L+ + + A + E S G N
Sbjct: 389 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 448
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
+F+ +I C+ F A + + M P T L++ LCK G+ +ALE+ Q
Sbjct: 449 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 508
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
G + +T N LL GLC G+++EA+ + + G D +Y ++ G C +
Sbjct: 509 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 568
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
+EA L+E ++RG+ P+ T++ L G + + K+ LPD +YS
Sbjct: 569 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 628
Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
+++G K + F EM+ + + + N L+R C L A ++ E
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR-----LSMALELRED 683
Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
M K + TY +I+ + + +EA + G P + +I G+
Sbjct: 684 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 743
Query: 421 IDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
+ K LL M+ P++ +Y ++I + +A L ++G++P
Sbjct: 744 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 796
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 158/354 (44%), Gaps = 9/354 (2%)
Query: 125 IMIRCYCN---KNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
++I YC ++ + A V + + G P+ TT IL+ SL ++ ++ E D +
Sbjct: 206 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 265
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
+ G P++ + + C G+VEEA ++ ++ G+ P+V T+ V+DG GR
Sbjct: 266 CK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 324
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTL 301
+EA + +ERG+ P ++T++ L G + +LK M K+ P+ I Y+ L
Sbjct: 325 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384
Query: 302 LNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKM 361
++ ++ G + A+ I MV G + N+L++G C + +A ++ ++M
Sbjct: 385 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD-----NAERLLKEM 439
Query: 362 TKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKI 421
+ G++ VI L D AL + + P +I LC GK
Sbjct: 440 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 499
Query: 422 DKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
KAL L F + + + L+ L + K +A + L +G + R
Sbjct: 500 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 553
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
KA +E + FD + + +N L+ A A++ + G++PNS
Sbjct: 635 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T++ +I+ + EA+ + + M G PNV +T L++ K G++ + +L +M
Sbjct: 695 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 754
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
PN TY ++ G G V EA +L ++ G+ PD TY + G+ K G
Sbjct: 755 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 814
Query: 242 NEAME 246
EA +
Sbjct: 815 LEAFK 819
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 10/177 (5%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
++ L +++ + +K G + + + + L+ + +++ E A F E GL PN +
Sbjct: 670 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 729
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
++ +I Y + ++ M HPN T+T+++ + G + EA +L++M
Sbjct: 730 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 789
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKV 238
G P+ TY + G G V EA++ D Y A+++G+ K+
Sbjct: 790 REKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAAIIEGWNKL 836
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 206/410 (50%), Gaps = 13/410 (3%)
Query: 73 FDSIKKDGT---NWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRC 129
F++ K+ G S L++AL+ N + E + PN +TF+++I
Sbjct: 173 FEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINA 232
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK---SGRLKEALEVLDQMGRIGC 186
C +AR V++ M G PNV ++ L++ CK +G++ +A VL +M
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV 292
Query: 187 KPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAME 246
PN+ T+N L+ G + + ++ + + +KP+V +Y ++++G C G+ +EA+
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
+ ++ + GV PN++T+N L NG+CK + + + +K + +P Y+ L++
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412
Query: 307 KWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVS 366
K GKI ++ +EM R G D N L+ GLC +E A ++F+++T K
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN-----IEAAKKLFDQLTSK-G 466
Query: 367 VTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALL 426
+ D T+ I++ + ++ +A + L +MG PR +T+N V++ C EG + A
Sbjct: 467 LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 427 LLFLMYEHAKIP-SRTSYDMLITKLDQLEKSYDACALYGAALKQGVIPQR 475
+ M + ++ + SY++L+ Q K DA L L++G++P R
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 2/266 (0%)
Query: 62 KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSW 121
K L + +F + +V +N L+ L + A+ + S G+ PN
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367
Query: 122 TFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQM 181
T++ +I +C + EA + + G P + +L+++ CK G++ + + ++M
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 182 GRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRS 241
R G P++ TYNCL+ GLC G +E A ++ + + GL PD+ T+ +M+G+C+ G S
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGES 486
Query: 242 NEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKI-SYST 300
+A LL E + G+ P +T+N + GYCKEG + M+K L + SY+
Sbjct: 487 RKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546
Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGF 326
LL G + GK+ A + EM+ G
Sbjct: 547 LLQGYSQKGKLEDANMLLNEMLEKGL 572
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 139/297 (46%), Gaps = 14/297 (4%)
Query: 160 ILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGR---VEEAYEMLMNV 216
+LV + + R + E + G G K + + L+ L R VE Y+ ++
Sbjct: 158 MLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRR 217
Query: 217 KNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCK---E 273
K ++P+V+T+ V++ CK G+ N+A +++ + G +PNVV++NTL +GYCK
Sbjct: 218 K---IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGN 274
Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
G K +LK M + + P+ +++ L++G K + ++ +FKEM+ + +
Sbjct: 275 GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334
Query: 334 NSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHL 393
NSL+ GLC + +A + +KM + TY +I K EAL
Sbjct: 335 NSLINGLC-----NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 394 HHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
G +P T +N +I A C GKID L M +P +Y+ LI L
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 8/272 (2%)
Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
R E +E G K + +M K RS + + E I R + PNV TFN
Sbjct: 168 RFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFN 227
Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWG---KIRPAVSIFKEM 321
+ N CK G K +++ MK C P+ +SY+TL++G K G K+ A ++ KEM
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287
Query: 322 VRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLG 381
V + N L+ G W++ D L + +VF++M + + +Y +I L
Sbjct: 288 VENDVSPNLTTFNILIDGF----WKD-DNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC 342
Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
G K EA+ + G P IT+N +I C + +AL + + +P+
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
Y+MLI +L K D AL ++G++P
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Query: 74 DSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNK 133
+ ++++G V +N L+ L E A K F + +S GL P+ TF I++ YC K
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRK 483
Query: 134 NDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGR-IGCKPNIQT 192
+ +A ++ M G P T+ I++ CK G LK A + QM + + N+ +
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS 543
Query: 193 YNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAV 231
YN LL+G G++E+A +L + GL P+ TY V
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 72 IFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYC 131
+FD + G V+ F+ L+ E A E S GL P T++I+++ YC
Sbjct: 458 LFDQLTSKGLPDLVT-FHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 132 NKNDFFEARKVIDCMF-DNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNI 190
+ + A + M + NV ++ +L+ + G+L++A +L++M G PN
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Query: 191 QTYNCLLKGLCYVGRVEEAYEMLMNV 216
TY + + + G V + L NV
Sbjct: 577 ITYEIVKEEMVDQGFVPDIEGHLFNV 602
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 177/332 (53%), Gaps = 6/332 (1%)
Query: 85 VSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
V+ +N L+ L ++E AV F EAS GL PN+ +++ +I+ YC ++ A K++
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404
Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
M + G P++ T+ IL++ L SG + +A+ + ++ G P+ YN L+ GLC G
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
R A + + + + PD Y Y ++DGF + G +EA ++ + ++E+GV +VV N
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN 524
Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
+ G+C+ G + + + M + + +PDK +YST+++G +K + A+ IF+ M +
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKN 584
Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
+ + SL+ G C + + A + F++M + V + TY +IR+L K
Sbjct: 585 KCKPNVVTYTSLINGFCCQG-----DFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 385 KT-DEALIHLHHAIEMGHIPRTITFNNVIQAL 415
T ++A+ + + +P +TFN ++Q
Sbjct: 640 STLEKAVYYWELMMTNKCVPNEVTFNCLLQGF 671
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 40/411 (9%)
Query: 88 FNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARK------ 141
+N ++ L + E A F E G P TF MI +C + DF + +
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302
Query: 142 -------------VIDCMFDNGYH----------------PNVTTFTILVNSLCKSGRLK 172
+ID + +GY P+V T+ IL+N LCK G+ +
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362
Query: 173 EALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVM 232
A+ LD+ + G PN +Y L++ C + A ++L+ + G KPD+ TY ++
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422
Query: 233 DGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCL 292
G G ++A+ + + I+RGV+P+ +N L +G CK G + L M RN L
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL 482
Query: 293 PDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLE 352
PD Y+TL++G ++ G A +F V G +VD N++++G C +L+
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC-----RSGMLD 537
Query: 353 DAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVI 412
+A +M ++ V D TY +I K + A+ + + P +T+ ++I
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Query: 413 QALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACALY 463
C +G A M +P+ +Y LI L + + + Y
Sbjct: 598 NGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 220/516 (42%), Gaps = 50/516 (9%)
Query: 1 MSSLVPSNSFIFTNTNRRNHNKIPQFNKLVVFAAASLSTAES----LD---LKENPRSLQ 53
+S + P ++ +N+ R + P+ KLV + L T ++ LD E R +
Sbjct: 6 LSRIKPLSNPHASNSFRSHLPITPRIKKLVSDTVSILKTQQNWSQILDDCFADEEVRFVD 65
Query: 54 AQRFV-DRIKASPLKERI-DIFDSIKKD---GTNWSVSDFNDLLMALVMLNEQETA---- 104
FV DRI+ + ++ D S KKD ++ S F LL + NE E
Sbjct: 66 ISPFVFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNL 125
Query: 105 ----VKFFSEASSYGLAP--NSWTFSIMIRCY---------------CNK--------ND 135
VK EA S+ L S + S + Y CN
Sbjct: 126 RNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRR 185
Query: 136 FFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNC 195
+ARKV D M D G + + ILV +C G+++ ++++ GC PNI YN
Sbjct: 186 LGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNT 245
Query: 196 LLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERG 255
++ G C +G +E AY + +K G P + T+ +++GFCK G + LL+E ERG
Sbjct: 246 IIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERG 305
Query: 256 VTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAV 315
+ +V N + + + G + + + +C PD +Y+ L+N L K GK AV
Sbjct: 306 LRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAV 365
Query: 316 SIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGI 375
E + G + L++ C +E D+ A ++ +M ++ D TYGI
Sbjct: 366 GFLDEASKKGLIPNNLSYAPLIQAYCKS--KEYDI---ASKLLLQMAERGCKPDIVTYGI 420
Query: 376 VIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHA 435
+I L D+A+ I+ G P +N ++ LC G+ A LL M +
Sbjct: 421 LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN 480
Query: 436 KIPSRTSYDMLITKLDQLEKSYDACALYGAALKQGV 471
+P Y LI + +A ++ ++++GV
Sbjct: 481 ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 127/266 (47%), Gaps = 1/266 (0%)
Query: 80 GTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEA 139
G + + L+ LV+ + AV + G++P++ +++++ C F A
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469
Query: 140 RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKG 199
+ + M D P+ + L++ +SG EA +V G K ++ +N ++KG
Sbjct: 470 KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKG 529
Query: 200 LCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPN 259
C G ++EA + + + L PD +TY+ ++DG+ K A+++ + PN
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Query: 260 VVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGK-IRPAVSIF 318
VVT+ +L NG+C +G K M+ R+ +P+ ++Y+TL+ L K + AV +
Sbjct: 590 VVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYW 649
Query: 319 KEMVRFGFEVDERMMNSLLRGLCMKS 344
+ M+ +E N LL+G K+
Sbjct: 650 ELMMTNKCVPNEVTFNCLLQGFVKKT 675
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 165/390 (42%), Gaps = 29/390 (7%)
Query: 98 LNEQETAVKFFSEASSYG---LAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPN 154
+ + E VK F SS N + S ++ F E V+ + +
Sbjct: 74 IQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLT 133
Query: 155 VTTFTILVNSLCKSGRLKEALEVLDQMGRI-GCKPNIQTYNCLLKGLCYVGRVEEAYEML 213
+ ++++ +SG L +A+E+ D + + P++ N LL L R+ +A ++
Sbjct: 134 HEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVY 193
Query: 214 MNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKE 273
+ + G D Y+ ++ G C G+ +L+ +G PN+V +NT+ GYCK
Sbjct: 194 DEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKL 253
Query: 274 GTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMM 333
G + K +K + +P ++ T++NG K G F +R++
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGD---------------FVASDRLL 298
Query: 334 NSLL-RGLCMKSWEEKDLLEDAYQVFEKMTKKVSV---------TDPGTYGIVIRTLGKG 383
+ + RGL + W ++++ Y+ K+ S+ D TY I+I L K
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKE 358
Query: 384 KKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSY 443
K + A+ L A + G IP +++ +IQA C + D A LL M E P +Y
Sbjct: 359 GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418
Query: 444 DMLITKLDQLEKSYDACALYGAALKQGVIP 473
+LI L DA + + +GV P
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSP 448
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 137/359 (38%), Gaps = 29/359 (8%)
Query: 32 FAAASLSTAESLDLKENPRSLQAQRFVDR-IKASPLKERIDIFDSIKKDGTNWSVSDFND 90
F A L +E LD P + +D I++ E +F + G V N
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525
Query: 91 LLMALVMLNEQETAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNG 150
++ + A+ + + L P+ +T+S +I Y + D A K+ M N
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 151 YHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEA- 209
PNV T+T L+N C G K A E +M PN+ TY L++ L E
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645
Query: 210 ---YEMLMNVKNDGLKPDVYTYTAVMDGFCKV--------------GRSNEAMELLNEAI 252
+E++M K P+ T+ ++ GF K G+S+ E +
Sbjct: 646 VYYWELMMTNK---CVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMK 702
Query: 253 ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIR 312
G + + +N+ C G M K+ PD +S++ +L+G G +
Sbjct: 703 SDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSK 762
Query: 313 PAVSI-FKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDP 370
++ F + G EV R L + L + ++ +A + M +K +P
Sbjct: 763 QWRNMDFCNLGEKGLEVAVRYSQVLEQHL------PQPVICEASTILHAMVEKADTKEP 815
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 206/408 (50%), Gaps = 13/408 (3%)
Query: 71 DIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSE-ASSYGLAPNSWTFSIMIRC 129
++FD + K G + +V FN L+ + + E A+ S + + P++ T++ +++
Sbjct: 190 EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKA 249
Query: 130 YCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPN 189
K + ++++ M NG PN T+ LV CK G LKEA ++++ M + P+
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD 309
Query: 190 IQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLN 249
+ TYN L+ GLC G + E E++ +K+ L+PDV TY ++DG ++G S EA +L+
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369
Query: 250 EAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLK-LMKKRNCLPDKISYSTLLNGLLKW 308
+ GV N VT N CKE +K L+ PD ++Y TL+ LK
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429
Query: 309 GKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVT 368
G + A+ + +EM + G +++ +N++L LC ++ L++A+ + K+ +
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALC-----KERKLDEAHNLLNSAHKRGFIV 484
Query: 369 DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLL 428
D TYG +I + +K ++AL ++ P TFN++I LC GK + A+
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 429 FLMYEHAKIPSRTSYDMLI---TKLDQLEKSYDACALYGAALKQGVIP 473
+ E +P ++++ +I K ++EK+++ Y ++K P
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFE---FYNESIKHSFKP 589
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 185/402 (46%), Gaps = 67/402 (16%)
Query: 115 GLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEA 174
GL PN T++ ++ YC EA ++++ M P++ T+ IL+N LC +G ++E
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329
Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLK------------ 222
LE++D M + +P++ TYN L+ G +G EA +++ ++NDG+K
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKW 389
Query: 223 ------------------------PDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTP 258
PD+ TY ++ + KVG + A+E++ E ++G+
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 259 NVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIF 318
N +T NT+ + CKE + LL KR + D+++Y TL+ G + K+ A+ ++
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Query: 319 KEMVRFGFEVDERMMNSLLRGLC--------MKSWEE----------------------K 348
EM + NSL+ GLC M+ ++E +
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569
Query: 349 DLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITF 408
+E A++ + + K D T I++ L K T++AL + IE + T+T+
Sbjct: 570 GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTY 628
Query: 409 NNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKL 450
N +I A C + K+ +A LL M E P R +Y+ I+ L
Sbjct: 629 NTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 177/368 (48%), Gaps = 9/368 (2%)
Query: 63 ASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNSWT 122
A ++E +++ D++K V +N L+ L A K + + G+ N T
Sbjct: 323 AGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVT 382
Query: 123 FSIMIRCYCNKNDFFEA--RKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
+I ++ C K + EA RKV + + +G+ P++ T+ L+ + K G L ALE++ +
Sbjct: 383 HNISLKWLC-KEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
MG+ G K N T N +L LC +++EA+ +L + G D TY ++ GF + +
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 241 SNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYST 300
+A+E+ +E + +TP V TFN+L G C G + + + LPD ++++
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 301 LLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEK 360
++ G K G++ A + E ++ F+ D N LL GLC + EK A F
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK-----ALNFFNT 616
Query: 361 MTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGK 420
+ ++ V D TY +I K KK EA L E G P T+N+ I L +GK
Sbjct: 617 LIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675
Query: 421 IDKALLLL 428
+ + LL
Sbjct: 676 LSETDELL 683
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 201/434 (46%), Gaps = 8/434 (1%)
Query: 44 DLKENPRSLQAQRFVDRI-KASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQE 102
+ K NP ++ + + K L + ++ +KK+G + +N+L+ L +
Sbjct: 233 EFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK 292
Query: 103 TAVKFFSEASSYGLAPNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILV 162
A + + P+ T++I+I CN E +++D M P+V T+ L+
Sbjct: 293 EAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352
Query: 163 NSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMN-VKNDGL 221
+ + G EA ++++QM G K N T+N LK LC + E + V G
Sbjct: 353 DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGF 412
Query: 222 KPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVG 281
PD+ TY ++ + KVG + A+E++ E ++G+ N +T NT+ + CKE +
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 282 LLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLC 341
LL KR + D+++Y TL+ G + K+ A+ ++ EM + NSL+ GLC
Sbjct: 473 LLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 342 MKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGH 401
E A + F+++ + + D T+ +I K + ++A + +I+
Sbjct: 533 HHGKTEL-----AMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSF 587
Query: 402 IPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLITKLDQLEKSYDACA 461
P T N ++ LC EG +KAL + E ++ + T Y+ +I+ + +K +A
Sbjct: 588 KPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVT-YNTMISAFCKDKKLKEAYD 646
Query: 462 LYGAALKQGVIPQR 475
L ++G+ P R
Sbjct: 647 LLSEMEEKGLEPDR 660
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 178/392 (45%), Gaps = 37/392 (9%)
Query: 118 PNSWTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCK---SGRLKEA 174
P+ F I + Y ++ A ++ M PN+ T L+ L + S + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 175 LEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKND-GLKPDVYTYTAVMD 233
EV D M +IG N+QT+N L+ G C G++E+A ML + ++ + PD TY ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 234 GFCKVGRSNEAMELLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLP 293
K GR ++ ELL + + G+ PN VT+N L GYCK G+ + +++LMK+ N LP
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 294 DKISYSTLLNGLLKWGKIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMK---SWEEKDL 350
D +Y+ L+NGL G +R + + M + D N+L+ G C + S E + L
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKL 367
Query: 351 LED-------AYQVF--------------EKMTKKVS--------VTDPGTYGIVIRTLG 381
+E A QV E +T+KV D TY +I+
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 382 KGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRT 441
K AL + + G TIT N ++ ALC E K+D+A LL ++ I
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487
Query: 442 SYDMLITKLDQLEKSYDACALYGAALKQGVIP 473
+Y LI + EK A ++ K + P
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 131/267 (49%), Gaps = 4/267 (1%)
Query: 61 IKASPLKERIDIFDSIKKDGTNWSVSDFNDLLMALVMLNEQETAVKFFSEASSYGLAPNS 120
+K L +++ + + G + N +L AL + + A + A G +
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Query: 121 WTFSIMIRCYCNKNDFFEARKVIDCMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQ 180
T+ +I + + +A ++ D M P V+TF L+ LC G+ + A+E D+
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 181 MGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGR 240
+ G P+ T+N ++ G C GRVE+A+E KPD YT +++G CK G
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 241 SNEAMELLNEAI-ERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYS 299
+ +A+ N I ER V + VT+NT+ + +CK+ + LL M+++ PD+ +Y+
Sbjct: 607 TEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664
Query: 300 TLLNGLLKWGKIRPAVSIFKEMV-RFG 325
+ ++ L++ GK+ + K+ +FG
Sbjct: 665 SFISLLMEDGKLSETDELLKKFSGKFG 691
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 247 LLNEAIERGVTPNVVTFNTLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLL 306
LL+ + P+ F+ + Y EG P + + + M + P+ ++ +TLL GL+
Sbjct: 118 LLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV 177
Query: 307 KWG---KIRPAVSIFKEMVRFGFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTK 363
++ I A +F +MV+ G ++ + N L+ G C++ LEDA + E+M
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK-----LEDALGMLERMVS 232
Query: 364 KVSVT-DPGTYGIVIRTLGKGKKTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKID 422
+ V D TY +++ + K + + L + G +P +T+NN++ C G +
Sbjct: 233 EFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK 292
Query: 423 KALLLLFLMYEHAKIPSRTSYDMLITKL 450
+A ++ LM + +P +Y++LI L
Sbjct: 293 EAFQIVELMKQTNVLPDLCTYNILINGL 320
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 214/452 (47%), Gaps = 29/452 (6%)
Query: 34 AASLSTAESL--DLKEN--PRSLQAQRFVDRIKASPLKERID----IFDSIKKDGTNWSV 85
A + ESL DL+ + P F+D ++ L R + IF I G SV
Sbjct: 96 ARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSV 155
Query: 86 SDFNDLLMALVMLNEQETAVKFFSEA-SSYGLAPNSWTFSIMIRCYCNKNDFFEARKVID 144
N LL L+ + F + S+G+ PN +T +++++ C KND A KV+D
Sbjct: 156 RSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLD 215
Query: 145 CMFDNGYHPNVTTFTILVNSLCKSGRLKEALEVLDQMGRIGCKPNIQTYNCLLKGLCYVG 204
+ G PN+ T+T ++ G ++ A VL++M G P+ TY L+ G C +G
Sbjct: 216 EIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLG 275
Query: 205 RVEEAYEMLMNVKNDGLKPDVYTYTAVMDGFCKVGRSNEAMELLNEAIERGVTPNVVTFN 264
R EA ++ +++ + ++P+ TY ++ CK +S EA + +E +ER P+
Sbjct: 276 RFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCC 335
Query: 265 TLFNGYCKEGTPMKGVGLLKLMKKRNCLPDKISYSTLLNGLLKWGKIRPAVSIFKEMVRF 324
+ + C++ + GL + M K NC+PD STL++ L K G++ A +F E +
Sbjct: 336 KVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK- 394
Query: 325 GFEVDERMMNSLLRGLCMKSWEEKDLLEDAYQVFEKMTKKVSVTDPGTYGIVIRTLGKGK 384
G N+L+ G+C EK L +A ++++ M ++ + TY ++I L K
Sbjct: 395 GSIPSLLTYNTLIAGMC-----EKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNG 449
Query: 385 KTDEALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYD 444
E + L +E+G P TF + + L GK + A+ ++ + + K+ + S++
Sbjct: 450 NVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV-DKESWE 508
Query: 445 MLITKLDQLEKSYDACALYGAALKQGVIPQRK 476
+ + K + L +GV+P ++
Sbjct: 509 LFLKK-------------FAGELDKGVLPLKE 527
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,347,441
Number of Sequences: 539616
Number of extensions: 7395014
Number of successful extensions: 26815
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 17925
Number of HSP's gapped (non-prelim): 2975
length of query: 479
length of database: 191,569,459
effective HSP length: 121
effective length of query: 358
effective length of database: 126,275,923
effective search space: 45206780434
effective search space used: 45206780434
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)