Query 011720
Match_columns 479
No_of_seqs 339 out of 2401
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 04:29:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011720.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011720hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3098 Uncharacterized conser 100.0 2.7E-28 5.7E-33 245.6 27.6 340 54-411 45-411 (461)
2 KOG0569 Permease of the major 99.9 4E-26 8.7E-31 232.0 20.5 364 61-446 62-460 (485)
3 TIGR01299 synapt_SV2 synaptic 99.9 2.2E-24 4.8E-29 232.3 23.3 116 57-175 200-315 (742)
4 KOG0254 Predicted transporter 99.9 1.6E-23 3.4E-28 220.7 23.0 361 62-444 92-487 (513)
5 TIGR00887 2A0109 phosphate:H+ 99.9 1.8E-22 4E-27 212.2 30.3 325 60-409 57-449 (502)
6 PRK10642 proline/glycine betai 99.9 3E-23 6.5E-28 217.6 23.9 309 65-401 63-391 (490)
7 TIGR00879 SP MFS transporter, 99.9 1.6E-22 3.5E-27 209.8 22.6 333 58-409 70-440 (481)
8 PRK12307 putative sialic acid 99.9 6.4E-22 1.4E-26 203.6 26.5 318 57-408 51-377 (426)
9 PRK10077 xylE D-xylose transpo 99.9 2.7E-22 5.9E-27 209.5 23.5 331 57-409 53-421 (479)
10 PRK11551 putative 3-hydroxyphe 99.9 3.1E-21 6.6E-26 197.3 27.6 312 57-409 48-365 (406)
11 COG2814 AraJ Arabinose efflux 99.9 5.1E-21 1.1E-25 189.3 27.7 340 22-410 7-357 (394)
12 PRK03545 putative arabinose tr 99.9 1.7E-20 3.7E-25 190.9 29.2 308 51-409 36-350 (390)
13 PRK11663 regulatory protein Uh 99.9 9.4E-21 2E-25 195.7 26.3 321 56-408 55-393 (434)
14 PRK09705 cynX putative cyanate 99.9 1.3E-20 2.8E-25 192.1 26.3 348 50-447 35-388 (393)
15 TIGR02332 HpaX 4-hydroxyphenyl 99.9 4.3E-20 9.4E-25 189.4 29.8 333 49-409 33-390 (412)
16 PRK09556 uhpT sugar phosphate 99.9 3.7E-21 8.1E-26 200.5 21.7 355 21-404 21-402 (467)
17 TIGR00891 2A0112 putative sial 99.9 3.6E-20 7.8E-25 188.5 27.6 322 56-409 44-385 (405)
18 PF00083 Sugar_tr: Sugar (and 99.9 6.4E-26 1.4E-30 235.2 -15.4 363 60-445 47-441 (451)
19 TIGR00900 2A0121 H+ Antiporter 99.9 3.7E-20 8E-25 185.4 26.8 316 57-408 32-357 (365)
20 PRK14995 methyl viologen resis 99.9 5.6E-20 1.2E-24 193.0 28.9 352 26-408 4-407 (495)
21 TIGR00893 2A0114 d-galactonate 99.9 2.1E-20 4.7E-25 188.6 24.6 325 57-409 27-368 (399)
22 PRK11273 glpT sn-glycerol-3-ph 99.9 4.4E-20 9.5E-25 191.7 26.6 368 55-448 59-444 (452)
23 TIGR00898 2A0119 cation transp 99.9 3.6E-20 7.8E-25 195.0 25.5 314 58-409 126-467 (505)
24 PRK10489 enterobactin exporter 99.9 1.5E-19 3.3E-24 185.6 29.2 313 57-409 50-369 (417)
25 TIGR00897 2A0118 polyol permea 99.9 2.9E-19 6.3E-24 182.7 30.2 318 57-409 46-371 (402)
26 PRK05122 major facilitator sup 99.9 1.9E-19 4.1E-24 183.6 28.4 340 19-407 9-357 (399)
27 PF07690 MFS_1: Major Facilita 99.9 6.5E-20 1.4E-24 182.8 23.8 316 56-404 29-351 (352)
28 TIGR00710 efflux_Bcr_CflA drug 99.9 7.1E-19 1.5E-23 177.9 30.9 312 57-408 38-356 (385)
29 PRK03893 putative sialic acid 99.9 1.2E-19 2.6E-24 190.5 25.2 117 56-175 52-168 (496)
30 TIGR00890 2A0111 Oxalate/Forma 99.8 2E-19 4.4E-24 180.7 24.8 312 57-409 36-352 (377)
31 PRK09952 shikimate transporter 99.8 2E-19 4.3E-24 186.0 25.1 309 66-406 71-398 (438)
32 TIGR00711 efflux_EmrB drug res 99.8 5.4E-19 1.2E-23 184.8 28.3 322 57-408 35-404 (485)
33 PRK12382 putative transporter; 99.8 1E-18 2.2E-23 177.9 29.3 307 56-409 48-359 (392)
34 TIGR00895 2A0115 benzoate tran 99.8 5.2E-19 1.1E-23 179.2 26.7 316 57-407 50-393 (398)
35 PRK10406 alpha-ketoglutarate t 99.8 2.5E-19 5.5E-24 184.9 24.7 297 64-398 68-382 (432)
36 TIGR00892 2A0113 monocarboxyla 99.8 2.7E-19 5.8E-24 185.9 24.8 319 58-409 53-390 (455)
37 PRK15402 multidrug efflux syst 99.8 2.3E-18 5E-23 176.1 30.2 316 56-409 45-365 (406)
38 PRK08633 2-acyl-glycerophospho 99.8 4E-19 8.8E-24 204.8 27.5 319 60-408 48-378 (1146)
39 TIGR00894 2A0114euk Na(+)-depe 99.8 1.9E-18 4.2E-23 180.0 29.5 237 58-300 75-324 (465)
40 PRK10504 putative transporter; 99.8 2.2E-18 4.8E-23 179.8 29.4 320 57-408 43-409 (471)
41 PRK15403 multidrug efflux syst 99.8 3.2E-18 6.9E-23 175.6 30.0 227 56-299 48-280 (413)
42 PRK10213 nepI ribonucleoside t 99.8 4.2E-18 9.1E-23 173.7 30.3 303 56-408 52-360 (394)
43 TIGR00881 2A0104 phosphoglycer 99.8 3.7E-19 7.9E-24 179.0 21.4 322 57-408 28-366 (379)
44 TIGR00886 2A0108 nitrite extru 99.8 9E-19 1.9E-23 176.2 24.1 319 55-400 33-365 (366)
45 TIGR00903 2A0129 major facilit 99.8 2.9E-18 6.3E-23 173.0 27.7 306 57-408 24-336 (368)
46 PRK15075 citrate-proton sympor 99.8 4.7E-18 1E-22 175.5 28.2 290 70-395 67-374 (434)
47 KOG2533 Permease of the major 99.8 3E-19 6.4E-24 184.1 18.2 240 58-300 80-336 (495)
48 PRK11102 bicyclomycin/multidru 99.8 1.2E-17 2.6E-22 168.9 29.6 239 57-313 24-268 (377)
49 PRK03633 putative MFS family t 99.8 7E-18 1.5E-22 171.2 27.1 298 57-408 39-341 (381)
50 PRK11195 lysophospholipid tran 99.8 7.4E-18 1.6E-22 171.8 27.3 307 58-409 37-351 (393)
51 PRK11043 putative transporter; 99.8 3.2E-17 6.9E-22 167.4 31.2 309 56-408 38-351 (401)
52 TIGR00883 2A0106 metabolite-pr 99.8 3.2E-18 6.9E-23 173.1 23.6 308 68-407 44-368 (394)
53 PRK09874 drug efflux system pr 99.8 9.1E-18 2E-22 171.5 27.1 301 62-408 57-367 (408)
54 PLN00028 nitrate transmembrane 99.8 5.5E-18 1.2E-22 177.0 25.1 239 57-305 69-318 (476)
55 PRK10091 MFS transport protein 99.8 1.4E-17 3E-22 169.1 27.1 230 57-312 36-272 (382)
56 PRK10473 multidrug efflux syst 99.8 3E-17 6.6E-22 167.1 29.5 235 57-312 36-276 (392)
57 TIGR00712 glpT glycerol-3-phos 99.8 4.5E-18 9.8E-23 175.9 23.8 326 56-407 58-401 (438)
58 PRK03699 putative transporter; 99.8 2.1E-17 4.6E-22 168.4 25.9 304 56-408 39-349 (394)
59 PRK11652 emrD multidrug resist 99.8 4.8E-17 1E-21 165.7 27.8 309 56-409 40-355 (394)
60 PRK11646 multidrug resistance 99.8 6.6E-17 1.4E-21 165.2 28.8 305 57-408 44-353 (400)
61 PRK15034 nitrate/nitrite trans 99.8 2.8E-17 6.1E-22 168.1 25.4 242 56-315 67-326 (462)
62 cd06174 MFS The Major Facilita 99.8 3.1E-17 6.8E-22 162.9 24.3 284 57-409 32-322 (352)
63 PRK10133 L-fucose transporter; 99.8 7.2E-17 1.6E-21 166.7 26.3 302 56-394 58-388 (438)
64 PRK06814 acylglycerophosphoeth 99.8 1.1E-16 2.4E-21 184.5 30.5 324 59-408 52-390 (1140)
65 TIGR00899 2A0120 sugar efflux 99.8 1.8E-16 3.8E-21 159.9 27.3 305 57-409 31-344 (375)
66 COG2271 UhpC Sugar phosphate p 99.8 1.8E-17 4E-22 162.3 19.1 352 20-404 20-399 (448)
67 PF05977 MFS_3: Transmembrane 99.8 6.2E-16 1.3E-20 161.8 31.3 348 22-408 7-363 (524)
68 KOG1330 Sugar transporter/spin 99.8 1.7E-18 3.7E-23 171.1 10.5 236 56-300 65-310 (493)
69 KOG0255 Synaptic vesicle trans 99.8 7.4E-17 1.6E-21 170.6 23.7 315 57-408 116-462 (521)
70 PRK11010 ampG muropeptide tran 99.8 4.1E-16 8.8E-21 163.4 28.7 296 74-405 60-369 (491)
71 KOG0252 Inorganic phosphate tr 99.8 8.5E-18 1.8E-22 165.5 14.4 331 54-406 79-460 (538)
72 TIGR00901 2A0125 AmpG-related 99.7 1.6E-15 3.4E-20 152.3 25.1 303 76-398 38-355 (356)
73 PRK10054 putative transporter; 99.7 1.9E-15 4E-20 154.2 25.5 306 56-408 40-353 (395)
74 TIGR00896 CynX cyanate transpo 99.7 1.2E-15 2.6E-20 153.1 23.7 301 56-404 32-338 (355)
75 TIGR00889 2A0110 nucleoside tr 99.7 1.7E-15 3.6E-20 155.7 24.9 345 56-446 35-408 (418)
76 TIGR00885 fucP L-fucose:H+ sym 99.7 4.2E-15 9E-20 152.3 26.7 120 56-175 35-154 (410)
77 KOG2532 Permease of the major 99.7 3.6E-15 7.8E-20 153.5 24.6 235 59-300 73-321 (466)
78 TIGR00806 rfc RFC reduced fola 99.7 1E-14 2.2E-19 147.2 25.6 145 56-211 58-207 (511)
79 TIGR00805 oat sodium-independe 99.7 9.3E-16 2E-20 164.8 18.1 118 58-175 67-232 (633)
80 PRK15011 sugar efflux transpor 99.7 5.8E-14 1.3E-18 143.1 29.6 302 58-409 50-361 (393)
81 TIGR00792 gph sugar (Glycoside 99.7 1.3E-14 2.8E-19 149.8 23.6 321 57-408 33-374 (437)
82 PRK09528 lacY galactoside perm 99.7 8.4E-15 1.8E-19 150.6 22.0 318 56-408 43-372 (420)
83 COG2223 NarK Nitrate/nitrite t 99.6 2.6E-14 5.6E-19 140.5 20.6 243 54-314 44-293 (417)
84 PRK10207 dipeptide/tripeptide 99.6 2.5E-13 5.4E-18 142.1 28.2 322 58-408 49-435 (489)
85 PF06609 TRI12: Fungal trichot 99.6 3.1E-13 6.7E-18 141.5 28.1 137 66-211 85-222 (599)
86 TIGR00882 2A0105 oligosacchari 99.6 1.5E-13 3.3E-18 140.1 25.6 314 57-408 36-364 (396)
87 TIGR00902 2A0127 phenyl propri 99.6 3.5E-13 7.6E-18 136.8 27.5 303 56-408 36-349 (382)
88 PRK11902 ampG muropeptide tran 99.6 5.2E-13 1.1E-17 136.5 28.4 224 73-312 46-283 (402)
89 PF05978 UNC-93: Ion channel r 99.6 7E-15 1.5E-19 128.2 11.8 119 55-177 33-151 (156)
90 KOG2615 Permease of the major 99.6 8.5E-14 1.8E-18 134.5 19.7 113 60-176 69-181 (451)
91 PRK11128 putative 3-phenylprop 99.6 3.6E-13 7.7E-18 136.8 25.3 302 57-408 37-349 (382)
92 TIGR00924 yjdL_sub1_fam amino 99.6 1.6E-12 3.6E-17 135.7 30.8 117 56-175 45-165 (475)
93 KOG3764 Vesicular amine transp 99.6 1.9E-14 4.1E-19 139.7 14.6 306 60-411 103-422 (464)
94 PRK09584 tppB putative tripept 99.6 2.1E-12 4.5E-17 135.7 28.4 102 72-175 70-174 (500)
95 KOG2504 Monocarboxylate transp 99.5 9.2E-13 2E-17 137.4 20.1 315 61-408 83-444 (509)
96 KOG0253 Synaptic vesicle trans 99.5 6.1E-13 1.3E-17 127.8 17.0 312 60-408 114-490 (528)
97 TIGR00788 fbt folate/biopterin 99.5 1.5E-11 3.2E-16 128.2 27.5 323 58-408 60-407 (468)
98 KOG3097 Predicted membrane pro 99.5 7E-14 1.5E-18 132.1 8.7 313 28-372 29-388 (390)
99 PF11700 ATG22: Vacuole efflux 99.5 4.2E-11 9E-16 124.2 29.0 323 60-408 71-436 (477)
100 PRK09669 putative symporter Ya 99.5 9.8E-12 2.1E-16 128.8 23.8 315 57-406 43-380 (444)
101 PRK10429 melibiose:sodium symp 99.5 1.8E-11 3.9E-16 128.0 25.4 324 57-406 40-385 (473)
102 TIGR01301 GPH_sucrose GPH fami 99.4 5.7E-11 1.2E-15 122.7 27.0 338 57-406 37-436 (477)
103 TIGR02718 sider_RhtX_FptX side 99.4 1.9E-10 4.2E-15 117.0 28.6 305 67-408 46-360 (390)
104 KOG4686 Predicted sugar transp 99.4 4E-12 8.7E-17 118.1 13.1 307 65-409 81-409 (459)
105 COG0738 FucP Fucose permease [ 99.4 6.5E-11 1.4E-15 116.1 19.5 233 58-300 47-299 (422)
106 PF13347 MFS_2: MFS/sugar tran 99.3 5E-11 1.1E-15 123.0 17.9 319 57-407 35-377 (428)
107 PTZ00207 hypothetical protein; 99.3 5.2E-10 1.1E-14 118.0 24.6 101 71-172 73-176 (591)
108 PRK15462 dipeptide/tripeptide 99.3 2.5E-09 5.5E-14 110.9 27.6 117 57-175 43-162 (493)
109 PRK09848 glucuronide transport 99.2 1.2E-09 2.6E-14 113.4 23.1 309 57-406 42-380 (448)
110 COG2270 Permeases of the major 99.2 2.5E-09 5.5E-14 105.7 23.7 314 60-408 59-397 (438)
111 KOG2563 Permease of the major 99.2 1.8E-10 3.9E-15 114.3 15.2 275 21-300 38-328 (480)
112 COG2211 MelB Na+/melibiose sym 99.2 3.9E-09 8.5E-14 107.3 24.2 319 57-406 46-388 (467)
113 PRK11462 putative transporter; 99.2 1.7E-08 3.7E-13 105.1 27.6 315 57-406 43-379 (460)
114 PF03209 PUCC: PUCC protein; 99.2 3.9E-08 8.5E-13 97.5 27.5 317 60-408 16-357 (403)
115 TIGR01272 gluP glucose/galacto 99.1 4.4E-09 9.6E-14 103.6 19.1 254 113-404 8-280 (310)
116 TIGR00880 2_A_01_02 Multidrug 99.1 1.4E-09 3.1E-14 92.6 13.1 130 70-208 9-139 (141)
117 PF03825 Nuc_H_symport: Nucleo 99.1 4.8E-08 1E-12 99.5 26.4 314 56-408 34-358 (400)
118 KOG2325 Predicted transporter/ 99.0 4.5E-08 9.7E-13 99.9 21.1 155 18-175 24-189 (488)
119 PRK10642 proline/glycine betai 99.0 1.3E-08 2.7E-13 107.0 17.6 112 62-174 289-401 (490)
120 COG2807 CynX Cyanate permease 99.0 1.3E-07 2.9E-12 91.8 22.4 297 57-404 45-346 (395)
121 TIGR01299 synapt_SV2 synaptic 99.0 5E-09 1.1E-13 113.9 14.0 106 66-174 602-707 (742)
122 TIGR00889 2A0110 nucleoside tr 98.9 2.4E-08 5.2E-13 102.7 15.0 150 61-210 253-405 (418)
123 COG3104 PTR2 Dipeptide/tripept 98.9 3.9E-07 8.5E-12 92.3 22.9 316 72-409 74-451 (498)
124 PF01306 LacY_symp: LacY proto 98.9 1.3E-07 2.8E-12 95.3 19.0 310 58-403 42-364 (412)
125 PF03092 BT1: BT1 family; Int 98.9 2.9E-07 6.3E-12 94.9 21.2 312 76-409 41-375 (433)
126 PF05631 DUF791: Protein of un 98.8 1.5E-06 3.2E-11 85.1 22.7 225 60-299 70-304 (354)
127 PRK09874 drug efflux system pr 98.7 1.3E-07 2.8E-12 96.5 13.3 128 69-205 268-396 (408)
128 KOG2816 Predicted transporter 98.7 1.8E-06 4E-11 89.0 21.2 296 73-407 76-385 (463)
129 PRK05122 major facilitator sup 98.7 2.7E-07 5.9E-12 94.0 14.6 108 65-175 255-362 (399)
130 PRK15011 sugar efflux transpor 98.7 5.3E-07 1.2E-11 91.9 16.6 112 60-175 253-364 (393)
131 cd06174 MFS The Major Facilita 98.7 3.5E-07 7.5E-12 90.6 14.6 115 58-175 210-325 (352)
132 PRK11551 putative 3-hydroxyphe 98.7 3.1E-07 6.7E-12 93.8 14.5 114 59-175 255-368 (406)
133 PRK10489 enterobactin exporter 98.7 7.4E-07 1.6E-11 91.5 17.0 113 60-175 260-372 (417)
134 KOG4686 Predicted sugar transp 98.6 7.2E-07 1.6E-11 83.6 13.4 160 13-176 252-413 (459)
135 PRK09528 lacY galactoside perm 98.6 7.7E-07 1.7E-11 91.5 14.1 138 61-207 264-403 (420)
136 TIGR00902 2A0127 phenyl propri 98.6 1.1E-06 2.4E-11 89.2 14.9 133 58-200 239-372 (382)
137 TIGR00890 2A0111 Oxalate/Forma 98.6 8.9E-07 1.9E-11 88.7 13.4 115 60-175 241-355 (377)
138 PRK10504 putative transporter; 98.5 2E-06 4.4E-11 89.7 15.9 112 63-174 301-412 (471)
139 PRK12382 putative transporter; 98.5 9.6E-07 2.1E-11 89.8 13.1 107 66-175 256-362 (392)
140 PRK09556 uhpT sugar phosphate 98.5 1.9E-06 4.1E-11 90.0 14.9 118 57-175 292-410 (467)
141 TIGR00883 2A0106 metabolite-pr 98.5 1.6E-06 3.4E-11 87.5 13.6 116 60-175 256-373 (394)
142 PRK12307 putative sialic acid 98.5 2.1E-06 4.6E-11 88.2 13.9 115 58-175 265-381 (426)
143 PRK09952 shikimate transporter 98.5 3.5E-06 7.6E-11 87.2 15.6 104 71-174 298-403 (438)
144 TIGR00899 2A0120 sugar efflux 98.5 4.7E-06 1E-10 83.8 15.7 105 67-175 243-347 (375)
145 KOG3626 Organic anion transpor 98.4 3.5E-06 7.6E-11 89.8 15.0 60 117-176 239-298 (735)
146 TIGR00879 SP MFS transporter, 98.4 2.3E-06 5E-11 88.6 13.2 144 61-210 321-473 (481)
147 TIGR00898 2A0119 cation transp 98.4 9.3E-06 2E-10 85.6 17.8 100 72-172 368-467 (505)
148 PRK10077 xylE D-xylose transpo 98.4 5.8E-06 1.3E-10 86.4 15.8 144 67-210 314-460 (479)
149 PRK09705 cynX putative cyanate 98.4 8.6E-06 1.9E-10 83.0 16.2 114 58-175 239-353 (393)
150 TIGR00892 2A0113 monocarboxyla 98.4 2E-06 4.2E-11 89.6 11.4 116 58-174 275-392 (455)
151 TIGR00895 2A0115 benzoate tran 98.4 3.2E-06 6.9E-11 85.4 12.3 113 58-173 284-396 (398)
152 PRK03893 putative sialic acid 98.4 3E-06 6.6E-11 88.9 12.4 118 57-175 309-426 (496)
153 PRK11128 putative 3-phenylprop 98.4 7.6E-06 1.7E-10 83.0 14.6 110 62-175 243-353 (382)
154 TIGR02332 HpaX 4-hydroxyphenyl 98.4 1.5E-06 3.3E-11 89.2 9.5 113 270-408 40-152 (412)
155 TIGR00893 2A0114 d-galactonate 98.3 3.7E-06 7.9E-11 84.5 11.9 114 270-409 26-139 (399)
156 PF11700 ATG22: Vacuole efflux 98.3 1E-05 2.2E-10 84.3 15.1 111 67-177 325-442 (477)
157 TIGR00891 2A0112 putative sial 98.3 7.6E-06 1.7E-10 83.0 13.6 116 58-175 273-388 (405)
158 PRK03699 putative transporter; 98.3 8.6E-06 1.9E-10 83.0 13.9 114 58-175 240-353 (394)
159 PF03137 OATP: Organic Anion T 98.3 1.1E-07 2.3E-12 100.4 -0.3 60 116-175 142-201 (539)
160 PRK11010 ampG muropeptide tran 98.3 6.5E-05 1.4E-09 79.0 20.6 135 67-207 267-403 (491)
161 PRK03545 putative arabinose tr 98.3 2.5E-05 5.4E-10 79.4 17.0 138 59-206 241-379 (390)
162 PRK11663 regulatory protein Uh 98.3 2E-05 4.2E-10 81.5 16.2 117 58-175 278-397 (434)
163 TIGR00711 efflux_EmrB drug res 98.3 1E-05 2.2E-10 84.6 14.2 119 57-175 289-408 (485)
164 TIGR00792 gph sugar (Glycoside 98.3 2.3E-05 4.9E-10 80.8 16.2 109 65-175 263-378 (437)
165 PRK03633 putative MFS family t 98.3 3.2E-05 7E-10 78.4 17.0 112 58-175 234-345 (381)
166 TIGR00900 2A0121 H+ Antiporter 98.3 6.7E-06 1.4E-10 82.0 11.7 112 60-174 248-360 (365)
167 PRK14995 methyl viologen resis 98.3 1E-05 2.2E-10 85.2 13.3 118 57-174 293-410 (495)
168 TIGR00710 efflux_Bcr_CflA drug 98.2 9.9E-06 2.1E-10 81.7 12.1 115 269-409 36-150 (385)
169 TIGR00897 2A0118 polyol permea 98.2 3.6E-05 7.9E-10 78.6 16.3 136 63-206 261-400 (402)
170 PF05977 MFS_3: Transmembrane 98.2 5.6E-05 1.2E-09 79.6 17.4 108 65-175 260-367 (524)
171 TIGR00880 2_A_01_02 Multidrug 98.2 4.9E-06 1.1E-10 70.5 7.4 103 281-409 6-108 (141)
172 PRK10406 alpha-ketoglutarate t 98.2 6.6E-05 1.4E-09 77.5 17.0 112 61-172 281-394 (432)
173 PF07690 MFS_1: Major Facilita 98.2 7.2E-06 1.6E-10 81.4 9.3 109 60-168 244-352 (352)
174 TIGR00881 2A0104 phosphoglycer 98.2 3.8E-06 8.2E-11 84.2 6.9 110 270-405 27-136 (379)
175 PRK15075 citrate-proton sympor 98.1 6.2E-05 1.3E-09 77.8 16.1 110 65-174 280-391 (434)
176 TIGR00901 2A0125 AmpG-related 98.1 1.7E-05 3.8E-10 79.4 11.6 91 71-161 257-355 (356)
177 PRK11273 glpT sn-glycerol-3-ph 98.1 4.3E-05 9.4E-10 79.4 14.8 138 60-204 290-432 (452)
178 TIGR00712 glpT glycerol-3-phos 98.1 3.6E-05 7.9E-10 79.6 13.8 116 269-406 57-172 (438)
179 PF13347 MFS_2: MFS/sugar tran 98.1 3.1E-05 6.7E-10 79.9 13.1 112 62-174 263-381 (428)
180 PRK10054 putative transporter; 98.1 5.6E-05 1.2E-09 77.1 14.5 97 76-175 261-357 (395)
181 PRK11102 bicyclomycin/multidru 98.1 1.9E-05 4.1E-10 79.6 10.9 113 270-408 23-135 (377)
182 PF03825 Nuc_H_symport: Nucleo 98.1 8.6E-05 1.9E-09 75.7 15.2 99 75-175 259-362 (400)
183 PRK09848 glucuronide transport 98.1 0.00013 2.8E-09 75.8 16.5 103 71-174 276-385 (448)
184 PRK15402 multidrug efflux syst 98.0 0.00019 4E-09 73.4 17.2 108 66-174 258-367 (406)
185 KOG0569 Permease of the major 98.0 8.1E-05 1.8E-09 76.8 14.1 140 65-211 311-458 (485)
186 TIGR00882 2A0105 oligosacchari 98.0 0.00011 2.4E-09 74.8 15.2 111 62-175 257-368 (396)
187 TIGR00887 2A0109 phosphate:H+ 98.0 8.6E-06 1.9E-10 85.9 7.2 115 274-408 57-171 (502)
188 PRK10473 multidrug efflux syst 98.0 4.9E-05 1.1E-09 77.2 12.5 113 270-408 35-147 (392)
189 COG2270 Permeases of the major 98.0 3.8E-05 8.3E-10 76.5 10.4 105 69-176 298-402 (438)
190 COG2211 MelB Na+/melibiose sym 98.0 0.00029 6.3E-09 72.2 16.7 147 22-173 233-392 (467)
191 PRK11646 multidrug resistance 98.0 0.00011 2.5E-09 75.0 13.9 96 78-176 262-358 (400)
192 PRK08633 2-acyl-glycerophospho 97.9 9E-05 2E-09 86.1 14.1 112 60-174 270-381 (1146)
193 TIGR00886 2A0108 nitrite extru 97.9 7.1E-05 1.5E-09 75.0 11.3 114 269-409 33-147 (366)
194 PRK09669 putative symporter Ya 97.9 0.00017 3.7E-09 74.7 14.4 104 70-174 275-385 (444)
195 PLN00028 nitrate transmembrane 97.9 0.00013 2.7E-09 76.5 13.3 146 58-211 287-437 (476)
196 COG2814 AraJ Arabinose efflux 97.9 0.00032 6.9E-09 70.4 15.0 114 58-175 246-359 (394)
197 TIGR01301 GPH_sucrose GPH fami 97.9 0.00021 4.6E-09 74.2 14.1 158 243-408 5-172 (477)
198 PRK11652 emrD multidrug resist 97.9 0.00013 2.8E-09 74.2 12.4 113 269-407 39-151 (394)
199 KOG0253 Synaptic vesicle trans 97.9 5.3E-05 1.1E-09 74.0 8.5 94 74-172 396-491 (528)
200 TIGR00788 fbt folate/biopterin 97.9 0.00019 4.2E-09 74.9 13.4 119 58-176 287-412 (468)
201 TIGR02718 sider_RhtX_FptX side 97.9 0.00051 1.1E-08 69.8 16.2 105 71-175 256-364 (390)
202 PF01770 Folate_carrier: Reduc 97.8 0.028 6.2E-07 56.8 27.9 131 73-211 55-186 (412)
203 PRK11902 ampG muropeptide tran 97.8 0.00034 7.4E-09 71.5 14.3 101 70-174 257-362 (402)
204 PRK15403 multidrug efflux syst 97.8 0.00014 3E-09 74.7 11.2 113 271-409 49-161 (413)
205 COG2271 UhpC Sugar phosphate p 97.8 4E-05 8.7E-10 76.3 6.7 146 237-408 21-173 (448)
206 TIGR00885 fucP L-fucose:H+ sym 97.8 0.00026 5.7E-09 72.6 13.1 117 270-409 35-151 (410)
207 COG0477 ProP Permeases of the 97.8 0.00019 4.1E-09 68.6 11.2 115 60-175 40-156 (338)
208 PRK10429 melibiose:sodium symp 97.8 0.00033 7.2E-09 73.3 13.8 105 70-174 277-390 (473)
209 TIGR00896 CynX cyanate transpo 97.8 0.00031 6.6E-09 70.4 13.0 115 57-175 230-346 (355)
210 PRK11043 putative transporter; 97.8 0.00099 2.1E-08 67.9 16.9 108 66-174 245-354 (401)
211 PRK11195 lysophospholipid tran 97.8 0.00041 8.9E-09 70.7 14.0 113 58-174 240-353 (393)
212 PF01306 LacY_symp: LacY proto 97.8 0.00036 7.8E-09 70.7 12.9 137 63-208 263-401 (412)
213 KOG2615 Permease of the major 97.8 2.8E-05 6E-10 76.2 4.6 107 275-408 70-176 (451)
214 TIGR00903 2A0129 major facilit 97.7 0.00017 3.8E-09 72.8 10.2 145 270-444 23-169 (368)
215 PRK06814 acylglycerophosphoeth 97.7 0.00032 6.9E-09 81.6 13.7 118 58-175 260-394 (1140)
216 TIGR00894 2A0114euk Na(+)-depe 97.7 2.9E-05 6.2E-10 81.0 4.1 116 270-409 73-188 (465)
217 PRK10091 MFS transport protein 97.7 0.0006 1.3E-08 69.1 13.6 114 58-175 234-348 (382)
218 TIGR01272 gluP glucose/galacto 97.7 0.0012 2.6E-08 65.1 14.8 114 56-175 175-288 (310)
219 PRK10213 nepI ribonucleoside t 97.6 0.0011 2.3E-08 67.7 14.8 104 68-175 261-364 (394)
220 PF06813 Nodulin-like: Nodulin 97.6 0.00096 2.1E-08 63.1 13.1 106 67-174 45-154 (250)
221 KOG3762 Predicted transporter 97.6 0.00039 8.4E-09 71.3 10.9 105 67-174 414-519 (618)
222 KOG4332 Predicted sugar transp 97.6 0.01 2.2E-07 55.9 18.6 66 75-144 88-154 (454)
223 PF06609 TRI12: Fungal trichot 97.5 0.0022 4.7E-08 68.2 15.4 105 69-174 359-464 (599)
224 KOG0255 Synaptic vesicle trans 97.5 0.00025 5.5E-09 75.1 8.6 140 274-444 119-258 (521)
225 KOG1330 Sugar transporter/spin 97.5 5.3E-05 1.2E-09 76.2 2.4 114 271-410 66-179 (493)
226 TIGR00805 oat sodium-independe 97.4 0.0007 1.5E-08 73.4 10.2 135 271-409 66-229 (633)
227 PRK10133 L-fucose transporter; 97.4 0.0021 4.5E-08 66.6 13.1 116 270-408 58-173 (438)
228 PF02487 CLN3: CLN3 protein; 97.4 0.022 4.8E-07 57.5 19.7 294 76-408 76-391 (402)
229 PTZ00207 hypothetical protein; 97.4 0.0015 3.3E-08 69.5 11.8 96 288-404 76-171 (591)
230 PRK11462 putative transporter; 97.4 0.0033 7.1E-08 65.6 14.2 107 67-174 271-384 (460)
231 PRK09584 tppB putative tripept 97.4 0.0025 5.4E-08 67.2 13.2 97 76-172 337-439 (500)
232 PF00083 Sugar_tr: Sugar (and 97.3 1.3E-05 2.9E-10 83.0 -4.0 112 275-409 48-159 (451)
233 KOG3764 Vesicular amine transp 97.3 0.00056 1.2E-08 67.7 7.4 112 273-409 106-217 (464)
234 PRK10207 dipeptide/tripeptide 97.3 0.0012 2.6E-08 69.4 10.5 102 73-174 323-438 (489)
235 KOG3574 Acetyl-CoA transporter 97.2 0.11 2.4E-06 51.6 21.6 94 77-171 81-189 (510)
236 TIGR00924 yjdL_sub1_fam amino 97.2 0.0027 5.9E-08 66.5 11.8 62 113-174 379-440 (475)
237 TIGR00806 rfc RFC reduced fola 97.2 0.0054 1.2E-07 63.0 12.7 115 269-410 57-172 (511)
238 PRK15462 dipeptide/tripeptide 97.1 0.0012 2.7E-08 68.9 8.0 117 269-409 41-159 (493)
239 PF06813 Nodulin-like: Nodulin 97.1 0.0029 6.2E-08 59.9 9.7 118 270-408 34-151 (250)
240 KOG0254 Predicted transporter 97.1 0.002 4.3E-08 68.2 9.5 108 276-409 92-199 (513)
241 PRK15034 nitrate/nitrite trans 97.1 0.006 1.3E-07 63.2 12.0 119 269-409 66-184 (462)
242 COG2807 CynX Cyanate permease 97.0 0.025 5.4E-07 55.7 15.0 151 20-174 202-356 (395)
243 PF03209 PUCC: PUCC protein; 96.9 0.048 1E-06 54.8 16.2 110 65-174 250-360 (403)
244 TIGR00769 AAA ADP/ATP carrier 96.9 0.19 4.1E-06 52.3 20.9 100 76-175 61-189 (472)
245 TIGR00926 2A1704 Peptide:H+ sy 96.8 0.022 4.8E-07 61.7 14.3 140 65-204 29-179 (654)
246 KOG2504 Monocarboxylate transp 96.7 0.0095 2.1E-07 62.7 10.5 116 56-174 330-447 (509)
247 COG2223 NarK Nitrate/nitrite t 96.7 0.003 6.6E-08 63.1 6.2 119 268-411 44-162 (417)
248 KOG2325 Predicted transporter/ 96.6 0.012 2.6E-07 60.7 10.0 150 275-446 73-235 (488)
249 KOG0252 Inorganic phosphate tr 96.6 0.0051 1.1E-07 62.2 6.7 135 75-211 364-501 (538)
250 PF05631 DUF791: Protein of un 96.2 0.16 3.4E-06 50.3 14.7 65 241-307 36-101 (354)
251 COG0738 FucP Fucose permease [ 96.2 0.04 8.6E-07 55.1 10.6 115 271-408 46-160 (422)
252 KOG2533 Permease of the major 96.1 0.038 8.3E-07 57.8 10.5 141 274-443 82-230 (495)
253 KOG2532 Permease of the major 95.5 0.018 4E-07 59.8 5.0 117 269-409 69-185 (466)
254 PF00854 PTR2: POT family; In 95.4 0.14 3E-06 51.7 11.1 107 90-202 2-118 (372)
255 KOG0637 Sucrose transporter an 95.3 0.6 1.3E-05 47.6 14.8 99 75-175 83-203 (498)
256 COG3104 PTR2 Dipeptide/tripept 95.3 0.03 6.6E-07 57.4 5.6 105 282-409 70-176 (498)
257 PF13000 Acatn: Acetyl-coenzym 95.0 5.2 0.00011 41.6 22.6 28 373-401 427-454 (544)
258 KOG0637 Sucrose transporter an 94.3 0.21 4.7E-06 50.7 8.7 117 282-409 76-200 (498)
259 PF06963 FPN1: Ferroportin1 (F 94.0 8.4 0.00018 39.7 23.8 121 268-408 288-412 (432)
260 KOG3810 Micronutrient transpor 93.3 3.2 6.9E-05 41.1 14.3 126 77-210 60-186 (433)
261 KOG2816 Predicted transporter 92.4 1.1 2.5E-05 46.5 10.8 106 65-174 283-389 (463)
262 PF02487 CLN3: CLN3 protein; 91.8 3 6.4E-05 42.4 12.7 63 112-174 332-394 (402)
263 KOG3762 Predicted transporter 91.6 2.6 5.6E-05 44.1 12.0 95 277-397 410-504 (618)
264 PF03092 BT1: BT1 family; Int 91.6 1.4 3.1E-05 45.5 10.6 103 74-176 270-379 (433)
265 PF03219 TLC: TLC ATP/ADP tran 91.4 21 0.00046 37.5 21.6 154 23-176 19-205 (491)
266 PF12832 MFS_1_like: MFS_1 lik 90.7 1.2 2.6E-05 33.8 6.7 43 56-98 32-74 (77)
267 TIGR00939 2a57 Equilibrative N 89.9 26 0.00057 36.2 24.9 55 352-407 373-427 (437)
268 PF12832 MFS_1_like: MFS_1 lik 89.7 0.52 1.1E-05 35.8 4.0 39 268-308 30-68 (77)
269 KOG3098 Uncharacterized conser 89.5 4.7 0.0001 41.7 12.0 93 75-168 295-405 (461)
270 PF07672 MFS_Mycoplasma: Mycop 89.3 3.2 6.9E-05 39.4 9.6 36 350-385 203-239 (267)
271 PRK03612 spermidine synthase; 87.2 9.5 0.00021 40.4 12.9 118 58-176 49-170 (521)
272 TIGR00939 2a57 Equilibrative N 86.7 7.9 0.00017 40.0 11.7 63 113-175 370-432 (437)
273 KOG2563 Permease of the major 85.9 4.1 8.9E-05 41.7 8.7 107 66-175 308-416 (480)
274 PF05978 UNC-93: Ion channel r 83.2 9.7 0.00021 33.3 8.9 96 282-404 46-141 (156)
275 COG3202 ATP/ADP translocase [E 78.8 89 0.0019 32.7 20.6 38 139-176 172-209 (509)
276 PF03137 OATP: Organic Anion T 78.6 0.57 1.2E-05 49.8 -0.5 135 271-409 36-198 (539)
277 PF06963 FPN1: Ferroportin1 (F 77.5 28 0.0006 36.0 11.4 98 74-172 308-413 (432)
278 PF06779 DUF1228: Protein of u 70.5 13 0.00028 28.8 5.4 52 50-101 18-69 (85)
279 TIGR00926 2A1704 Peptide:H+ sy 70.4 23 0.00049 38.7 9.2 108 286-409 36-145 (654)
280 KOG1479 Nucleoside transporter 69.7 16 0.00034 37.2 7.2 62 112-173 340-401 (406)
281 PF13000 Acatn: Acetyl-coenzym 68.2 43 0.00093 35.1 10.0 25 382-406 148-172 (544)
282 KOG1479 Nucleoside transporter 67.2 1.5E+02 0.0033 30.2 20.1 51 353-404 345-395 (406)
283 COG0477 ProP Permeases of the 66.5 60 0.0013 30.0 10.5 107 275-405 41-149 (338)
284 KOG1237 H+/oligopeptide sympor 64.0 67 0.0014 34.5 11.0 108 67-174 81-217 (571)
285 PF07672 MFS_Mycoplasma: Mycop 58.9 69 0.0015 30.5 8.8 94 67-163 149-254 (267)
286 PF01770 Folate_carrier: Reduc 57.4 1.6E+02 0.0035 30.1 11.9 58 350-409 93-150 (412)
287 PF11947 DUF3464: Protein of u 56.6 43 0.00093 29.0 6.5 83 81-166 56-145 (153)
288 PF01733 Nucleoside_tran: Nucl 55.7 4.2 9.1E-05 39.9 0.3 62 113-174 246-307 (309)
289 PF06779 DUF1228: Protein of u 51.5 21 0.00045 27.7 3.5 44 268-313 22-65 (85)
290 KOG3880 Predicted small molecu 44.2 3.1E+02 0.0067 27.2 10.7 59 349-408 340-398 (409)
291 KOG1237 H+/oligopeptide sympor 34.0 1.4E+02 0.0031 32.0 7.7 63 114-176 457-519 (571)
292 COG2119 Predicted membrane pro 32.8 2.2E+02 0.0047 25.6 7.2 38 70-107 145-182 (190)
293 KOG3574 Acetyl-CoA transporter 28.8 6.6E+02 0.014 25.9 12.1 67 241-311 30-104 (510)
294 KOG4332 Predicted sugar transp 28.3 81 0.0018 30.4 4.1 42 265-309 64-106 (454)
295 PF00854 PTR2: POT family; In 27.6 1.5E+02 0.0034 29.5 6.4 57 353-409 35-93 (372)
296 KOG3880 Predicted small molecu 24.4 1.9E+02 0.004 28.7 5.8 63 112-174 339-401 (409)
297 KOG3626 Organic anion transpor 24.3 1.2E+02 0.0026 33.5 5.1 53 355-408 241-293 (735)
298 TIGR00769 AAA ADP/ATP carrier 24.2 8.4E+02 0.018 25.5 14.9 52 355-407 132-184 (472)
299 PF11947 DUF3464: Protein of u 23.0 1.4E+02 0.0029 26.0 4.2 50 349-402 95-144 (153)
300 KOG3810 Micronutrient transpor 20.2 2.5E+02 0.0053 28.4 5.7 92 64-156 276-367 (433)
No 1
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.97 E-value=2.7e-28 Score=245.61 Aligned_cols=340 Identities=22% Similarity=0.293 Sum_probs=246.0
Q ss_pred CCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhh
Q 011720 54 GQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLW 133 (479)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~ 133 (479)
+..+++.+..++++.|..+.++|++++++.|+.|.||.|.+|+..|..|..++++. |.+.++++.++.|+|+++.|
T Consensus 45 g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~----N~y~~yfssallG~Gaallw 120 (461)
T KOG3098|consen 45 GGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP----NSYYLYFSSALLGFGAALLW 120 (461)
T ss_pred CCcCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc----chHHHHHHHHHhhhhHHhee
Confidence 34567788889999999999999999999999999999999999999999999886 58999999999999999999
Q ss_pred hhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCccc--ccch-h-----HHHHHHHHHHHHHHHH-
Q 011720 134 AGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAES--VNDK-T-----YIAFMCFMSAGAALSL- 204 (479)
Q Consensus 134 ~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~--~~~~-~-----~~i~~~l~~l~~~l~~- 204 (479)
++++.|++|+++++++.|..++.|.....+.++|+.+.+.+.++.+.... ...+ . +..+.+..+..++...
T Consensus 121 ~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~ 200 (461)
T KOG3098|consen 121 TGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAIS 200 (461)
T ss_pred cccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988877655432111 1110 0 1111111111111111
Q ss_pred ------hccCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccccccccc-------cc-
Q 011720 205 ------AILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFYSYQFNNVNGL-------MF- 270 (479)
Q Consensus 205 ------~~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~s~~~~~~~~~-------~f- 270 (479)
....|++. .....+.. +.++.+++|...+.+++||++++.|.++++++..++..+.++.. ..
T Consensus 201 ~l~~i~~~~~p~~~---~~~~~~~~-~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n 276 (461)
T KOG3098|consen 201 VLSIINFDFLPSKD---VVNCKSSS-ETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSN 276 (461)
T ss_pred HHHhhheeecCccc---hhhhhhhc-cccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCc
Confidence 01111110 00000001 14677888999999999999999999999998666543333221 11
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhhhhcccc-ccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCC--CCC-CcccccC
Q 011720 271 NLRTRGLNNVFYWGAQMLGSVGIGYVMDFS-FQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHD--DPP-KRLDFKT 346 (479)
Q Consensus 271 ~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~-~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~ 346 (479)
+....++..+..++++++++...+.+.||. +.||++...++.....+...++. ...+++.+ ++. +..++ .
T Consensus 277 ~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~-----l~~p~dap~~~t~~~~~~~-~ 350 (461)
T KOG3098|consen 277 TTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIH-----LSFPNDAPLRPTDSPPLLF-T 350 (461)
T ss_pred chhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHh-----ccccccCCCCCCccccccc-c
Confidence 222346677889999999999999999884 57888877666544322221211 12222221 000 11222 2
Q ss_pred CCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccC
Q 011720 347 SGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDTHK 411 (479)
Q Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 411 (479)
+.+....++.++.|+.|+++|++.+++++... +++|.++++++++.|++++|+.++..+..
T Consensus 351 --~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~--~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 351 --PSYYLALIIGFLLGFGDACFNTQRYVIIALLY--PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred --cchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 45778899999999999999999999999999 67789999999999999999998888754
No 2
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=4e-26 Score=231.99 Aligned_cols=364 Identities=12% Similarity=0.071 Sum_probs=231.3
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhh
Q 011720 61 ANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIM 140 (479)
Q Consensus 61 ~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i 140 (479)
-+..++++..+..+|++++++++||+|||.++.++.+..++...........++..+++++|++.|+..|......+.|+
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34566778888889999999999999999999999887666333333333457889999999999999999999999999
Q ss_pred hcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCccc----ccCC
Q 011720 141 TSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRV----IRDD 216 (479)
Q Consensus 141 ~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~----~r~d 216 (479)
.|++|++.||....+......+|.++|..++.--.... .-.|.....+..+..+..++.+++.||+|+ +|.|
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt----~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~ 217 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGT----EDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGD 217 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCC----CcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCC
Confidence 99999999999999999999999999877665322211 122432222222222222334566787762 1222
Q ss_pred C--Cccccc-----c--cCCH---HHHH----------HHHHHHhhch----HHHHHHHHHHHhhhh---hhccccc-cc
Q 011720 217 G--TRCTNI-----K--YSKV---STEA----------IEILKLFRNW----KMLLLFPAAWASNFF---YSYQFNN-VN 266 (479)
Q Consensus 217 ~--~~~~~~-----~--~~~~---~~~~----------~~~~~~~~~~----r~ll~~~~~~~~~~~---~s~~~~~-~~ 266 (479)
+ ++...+ + ++.. .++. ...++.++++ .+.+.+.+.+.+++. ...+|++ +.
T Consensus 218 ~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~ 297 (485)
T KOG0569|consen 218 EEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIF 297 (485)
T ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHH
Confidence 1 110000 0 0000 0000 0122333322 233333333444431 0011111 11
Q ss_pred -cccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCccccc
Q 011720 267 -GLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFK 345 (479)
Q Consensus 267 -~~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (479)
..+++..+....+...++.+++.++++.++.|| .|||++++.+..++.+....+... ...+.... +|
T Consensus 298 ~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~--~gRRpLll~~~~~~~~~~~~~~~~-~~l~~~~~--------~~- 365 (485)
T KOG0569|consen 298 KTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR--LGRRPLLLISLSLMAVALLLMSIA-LFLSNSFG--------SW- 365 (485)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhh--------hH-
Confidence 345666666788889999999999999999999 789999998877665433333221 11111000 12
Q ss_pred CCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCcchhHHHHHHHHHH
Q 011720 346 TSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDTHKVSLLSQLIINWSLT 425 (479)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~i~~~~~ 425 (479)
..|..+.+++++...+..+-.|..|.+.+|++ |++.|..+.++...++++++.+.-...|.....+..+ .+.++
T Consensus 366 ---~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf-~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~~--~filF 439 (485)
T KOG0569|consen 366 ---LSYLCIAAIFLFIISFAIGPGPIPWFIGAELF-PQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGPY--VFILF 439 (485)
T ss_pred ---HHHHHHHHHHHHHHhhhcCCCchhHHHHHHhC-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--hhHHH
Confidence 34556777778888888888999999999999 8899999999888888888877766554221111111 22333
Q ss_pred HhhhhhhheeeeeEeccCCCC
Q 011720 426 TVSYPLLVVLVMLAVKDDDKS 446 (479)
Q Consensus 426 ~~~~~~~~~~v~~~~pet~~~ 446 (479)
++.+.....+.|+++|||.+.
T Consensus 440 ~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 440 VIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHHHHHHHHhCcccCCC
Confidence 344456667889999999643
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.93 E-value=2.2e-24 Score=232.32 Aligned_cols=116 Identities=15% Similarity=0.232 Sum_probs=99.6
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...++.+++..++++++|+++||+|||++++++.+++.++. .++. .+++.+.++++|++.|+|.|...+..
T Consensus 200 s~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~--ll~a-fa~s~~~llv~R~l~G~g~g~~~p~~ 276 (742)
T TIGR01299 200 PDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFA--FFSS-FVQGYGFFLFCRLLSGFGIGGAIPIV 276 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH--HHHH-HHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666788889999999999999999999999999988877633 3322 35789999999999999999999999
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
..+++|++|+++||+.++++.++..+|.+++++++..+.
T Consensus 277 ~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 277 FSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988776543
No 4
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.92 E-value=1.6e-23 Score=220.74 Aligned_cols=361 Identities=13% Similarity=0.067 Sum_probs=228.0
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhh
Q 011720 62 NNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMT 141 (479)
Q Consensus 62 ~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~ 141 (479)
+...+..+++.+++++++|+++|++|||++++++.+.+.+ +..+.. .++|.++++++|++.|+|.|......+.|++
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~i--G~ii~~-~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLI--GAIIIA-LAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH--HHHHHH-HhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 5667788888899999999999999999999999999988 444443 4679999999999999999999999999999
Q ss_pred cCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCccc--cc---CC
Q 011720 142 SYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRV--IR---DD 216 (479)
Q Consensus 142 e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~--~r---~d 216 (479)
|++|++.||...+.++....+|..+|.++++..... .++||.......+..+...+.+++.||++. .| .+
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~-----~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~ 243 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV-----YAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLE 243 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC-----CccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChH
Confidence 999999999999999999999999997777655321 146775544444444333334666776642 22 11
Q ss_pred CCccc---c-c-ccCCHHHHH---H-------------HHHHHh----hchHHHHHHHHHHHhhhh-h---hccccccc-
Q 011720 217 GTRCT---N-I-KYSKVSTEA---I-------------EILKLF----RNWKMLLLFPAAWASNFF-Y---SYQFNNVN- 266 (479)
Q Consensus 217 ~~~~~---~-~-~~~~~~~~~---~-------------~~~~~~----~~~r~ll~~~~~~~~~~~-~---s~~~~~~~- 266 (479)
+.+.. . . ++.+...+. + ..++.+ .+++..+...+..++++. + .++...+.
T Consensus 244 ~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~ 323 (513)
T KOG0254|consen 244 EAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFK 323 (513)
T ss_pred HHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHH
Confidence 11100 0 0 011111111 0 001111 223444455555556551 0 11111111
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccC
Q 011720 267 GLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKT 346 (479)
Q Consensus 267 ~~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (479)
..+++... .......++.++++..+...+.|| +|||++++.|...+.+...++ +....... ... + ....
T Consensus 324 ~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~--~gRr~lll~s~~~m~~~~~~~-~~~~~~~~-~~~---~---~~~~ 392 (513)
T KOG0254|consen 324 SAGLKSDT-FLASIILGVVNFLGTLVATYLVDR--FGRRKLLLFGAAGMSICLVIL-AVVGVFAL-YYP---N---SSKG 392 (513)
T ss_pred hcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHH--hccHHHHHHhHHHHHHHHHHH-HHHHHHhc-cCC---C---cccc
Confidence 12222112 456677888889999989999999 789999999987765333222 21111111 100 0 0111
Q ss_pred CCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCcchhHHHHHHHHHHH
Q 011720 347 SGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDTHKVSLLSQLIINWSLTT 426 (479)
Q Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~i~~~~~~ 426 (479)
..+..+..+.++...+..++.+..|.+.+|++ |.+.|+++.++...+++..+.+.....+............+.+..
T Consensus 393 --~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEif-p~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~ 469 (513)
T KOG0254|consen 393 --AGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIF-PLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGG 469 (513)
T ss_pred --hhHHHHHHHHHHHHHHhcccccchhhhhhccC-cHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHH
Confidence 34566677788888999999998888889999 899999998888877777766664443321111110111222222
Q ss_pred hhhhhhheeeeeEeccCC
Q 011720 427 VSYPLLVVLVMLAVKDDD 444 (479)
Q Consensus 427 ~~~~~~~~~v~~~~pet~ 444 (479)
++.+....++++++|||.
T Consensus 470 ~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 470 ICLLSLIIFVFFFVPETK 487 (513)
T ss_pred HHHHHHHHHheEEcccCC
Confidence 222333337889999995
No 5
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.92 E-value=1.8e-22 Score=212.24 Aligned_cols=325 Identities=13% Similarity=0.102 Sum_probs=188.8
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCc------hhhHHHHHHHHhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHD------QTFAVVAGAVLGIGAGLLW 133 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~------~~~li~~R~i~G~g~g~~~ 133 (479)
..+...+....+..++++++|+++||+|||+++.++.+++.+....... +++ .++++++|++.|++.|...
T Consensus 57 ~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~r~l~G~~~g~~~ 133 (502)
T TIGR00887 57 VSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGL---SPGSSPKSVMATLCFWRFWLGVGIGGDY 133 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH---ccCcccchHHHHHHHHHHHHHHHHhhhh
Confidence 4456677777888999999999999999999999998888774332222 222 6789999999999999999
Q ss_pred hhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCC-----------------cccccchhHHHHHHHH
Q 011720 134 AGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTD-----------------AESVNDKTYIAFMCFM 196 (479)
Q Consensus 134 ~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~-----------------~~~~~~~~~~i~~~l~ 196 (479)
+..+.+++|++|+++||+.+++++....+|.++|+.++..+...... ..+++||..+....+.
T Consensus 134 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip 213 (502)
T TIGR00887 134 PLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVP 213 (502)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887654321000 0124576544333322
Q ss_pred HHHHHHHHhccCCccc-----ccCCC-Ccc----------ccccc---------CCHHHHHHHHHHHhhch---HHHH-H
Q 011720 197 SAGAALSLAILPPSRV-----IRDDG-TRC----------TNIKY---------SKVSTEAIEILKLFRNW---KMLL-L 247 (479)
Q Consensus 197 ~l~~~l~~~~~~~~~~-----~r~d~-~~~----------~~~~~---------~~~~~~~~~~~~~~~~~---r~ll-~ 247 (479)
.+...+..++.||++. +|+|+ .+. +.+.+ +..+.++++.++...+| |..+ .
T Consensus 214 ~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 293 (502)
T TIGR00887 214 ALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGT 293 (502)
T ss_pred HHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHH
Confidence 2222233445676642 23211 000 00000 00011233443322112 2222 1
Q ss_pred HHHHHHhhh-hhhcc--ccccc-cccccchhh-----------hH-HHHHHHHHHHHHHHHhhhhccccccCccceeeeh
Q 011720 248 FPAAWASNF-FYSYQ--FNNVN-GLMFNLRTR-----------GL-NNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVG 311 (479)
Q Consensus 248 ~~~~~~~~~-~~s~~--~~~~~-~~~f~~~~~-----------~l-~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g 311 (479)
....+...+ +|+.. .+++. ..+++..+. .+ ......++.+++.++.+++.|| +|||+..+.+
T Consensus 294 ~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr--~gRR~~l~~~ 371 (502)
T TIGR00887 294 AGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI--IGRKPIQLMG 371 (502)
T ss_pred HHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hcchhHHHHH
Confidence 222222222 12210 12222 112221110 11 1233455667788889999999 7899877666
Q ss_pred hhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHH
Q 011720 312 IGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTG 391 (479)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~ 391 (479)
...+.++. .+.. ... . ... .. .......++..++..++.+..+.+.+|++ |.+.|+++.+
T Consensus 372 ~~~~~~~~-~~l~--~~~----~--------~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-p~~~R~~~~g 431 (502)
T TIGR00887 372 FFILTVLF-FVLG--FAY----N--------HLS---TH-GFLAIYVLAQFFANFGPNATTFIVPGEVF-PTRYRSTAHG 431 (502)
T ss_pred HHHHHHHH-HHHH--HHH----H--------hcc---hh-HHHHHHHHHHHHHhcCCCchhhhhhhccC-chhHHHHHHH
Confidence 54432221 1111 110 0 001 11 11111222223334455666777889999 8999999999
Q ss_pred HHHHHHHHHHHHHhhhcc
Q 011720 392 FYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 392 ~~~~~~~~g~~i~~~~~~ 409 (479)
+.+.+..++.+++..+.+
T Consensus 432 ~~~~~~~~~~~~~~~~~~ 449 (502)
T TIGR00887 432 ISAASGKAGAIIGQFGFL 449 (502)
T ss_pred HHHHHhhhHHHHHHHHhh
Confidence 999999999988876654
No 6
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.91 E-value=3e-23 Score=217.57 Aligned_cols=309 Identities=11% Similarity=0.028 Sum_probs=175.3
Q ss_pred HHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhh--------HHHHHHHHhhhhhhhhhhh
Q 011720 65 NTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTF--------AVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 65 ~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~--------li~~R~i~G~g~g~~~~~~ 136 (479)
.++.+.+.++|+++.|+++||+|||+++.++.+++.+.+ .++. .++|+++ +++.|+++|+|.|..++..
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~--~~~a-~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~ 139 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSIST--FCIG-LIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGA 139 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH--HHHH-hcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHH
Confidence 467788899999999999999999999999999988743 3332 4567654 8999999999999999999
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhh-ccC-CcccccchhH-HHHHHHHHHHHHHHHhccCCccc-
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNY-HRT-DAESVNDKTY-IAFMCFMSAGAALSLAILPPSRV- 212 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~-~~~-~~~~~~~~~~-~i~~~l~~l~~~l~~~~~~~~~~- 212 (479)
..+++|++|+++||+..++......+|..+|+.+...+.. ..+ ...+++||.. ++..++.++..+ .....||++.
T Consensus 140 ~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~-~~~~~~esp~~ 218 (490)
T PRK10642 140 SIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLY-LRHALEETPAF 218 (490)
T ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHH-HHHcCCCChhH
Confidence 9999999999999999999998888888888866543321 000 0013567643 222222222222 2233454432
Q ss_pred -ccCCCCcc-ccc-ccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh-hhh--cccccccc--ccccchhhhHHHHHHHH
Q 011720 213 -IRDDGTRC-TNI-KYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF-FYS--YQFNNVNG--LMFNLRTRGLNNVFYWG 284 (479)
Q Consensus 213 -~r~d~~~~-~~~-~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~-~~s--~~~~~~~~--~~f~~~~~~l~~~~~~i 284 (479)
.++++.+. ..+ .++..+..+++.++. ..++++......+.... ++. ..++++.. .+++..+..+......+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~ 297 (490)
T PRK10642 219 QQHVDKLEQGDREGLQDGPKVSFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMI 297 (490)
T ss_pred HHHHHhhhhhccccccccccCCHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 11110000 000 000000112222221 11222222222222221 111 11244432 23444445556667788
Q ss_pred HHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhh
Q 011720 285 AQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLL 364 (479)
Q Consensus 285 ~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 364 (479)
+.+++.++.|++.|| +|||+....+.....+....++ . . . . . .+.....+..++.++.
T Consensus 298 ~~~~~~~~~g~l~dr--~grr~~~~~~~~~~~~~~~~~~---~-~-~--~-----------~--~~~~~~~~~~~~~g~~ 355 (490)
T PRK10642 298 GMLFVQPVMGLLSDR--FGRRPFVILGSVALFVLAIPAF---I-L-I--N-----------S--NVIGLIFAGLLMLAVI 355 (490)
T ss_pred HHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHH---H-H-H--h-----------C--CCHHHHHHHHHHHHHH
Confidence 889999999999999 7899865554432211111111 0 0 0 0 0 1122223333444444
Q ss_pred HHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHH
Q 011720 365 DAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGA 401 (479)
Q Consensus 365 ~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~ 401 (479)
.+........++++++ |++.|+++.++.......+.
T Consensus 356 ~~~~~g~~~~~~~~~~-p~~~Rg~~~g~~~~~~~~~g 391 (490)
T PRK10642 356 LNCFTGVMASTLPAMF-PTHIRYSALAAAFNISVLVA 391 (490)
T ss_pred HHHHHHHHHHHHHHHC-CCccchHHHHHHHHHHHHHH
Confidence 4444455666778899 88999999886433333333
No 7
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.90 E-value=1.6e-22 Score=209.76 Aligned_cols=333 Identities=11% Similarity=0.037 Sum_probs=193.3
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
....+...++.+.+..+++++.|+++||+|||+.+.++.+++.+............+.+.++++|++.|+|.+..++...
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 149 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVP 149 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHH
Confidence 44566677888888999999999999999999999999998877433332222234556899999999999999999999
Q ss_pred hhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchh-HHHHHHHHHHHHHHHHhccCCccc---c
Q 011720 138 AIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKT-YIAFMCFMSAGAALSLAILPPSRV---I 213 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~~---~ 213 (479)
.++.|+.|+++|++.++++.....+|..+|+.+........ ...+|+. +++ ..+..+..++..++.|+++. .
T Consensus 150 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~---~~~~w~~~f~~-~~~~~~~~~~~~~~l~~~~~~~~~ 225 (481)
T TIGR00879 150 MYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLN---NTLGWRIPLGL-QLIPAGLLFLGLFFLPESPRWLVG 225 (481)
T ss_pred HHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCC---CCccHHHHHHH-HHHHHHHHHHHHhcCCCChHHHHH
Confidence 99999999999999999999999999999999871111110 1234543 333 22222222233344454331 1
Q ss_pred cCCCCc--cc-----ccccCCH--HH------------------HHHHHHHHhh--chHHHHHHHHHHHhhhh----hhc
Q 011720 214 RDDGTR--CT-----NIKYSKV--ST------------------EAIEILKLFR--NWKMLLLFPAAWASNFF----YSY 260 (479)
Q Consensus 214 r~d~~~--~~-----~~~~~~~--~~------------------~~~~~~~~~~--~~r~ll~~~~~~~~~~~----~s~ 260 (479)
+++.++ .. ..+++.. .+ ++++.++..+ .++.+....+....... ..+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (481)
T TIGR00879 226 KGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMY 305 (481)
T ss_pred cCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHH
Confidence 110000 00 0000000 00 0011111111 12222222222221110 011
Q ss_pred cccccc-cccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCC
Q 011720 261 QFNNVN-GLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPP 339 (479)
Q Consensus 261 ~~~~~~-~~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (479)
..+.+. ..+++..+.++......++.+++.++.+++.|| +|||+....+...+. +.+.+.. ... ....+ +
T Consensus 306 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~--~~~~~~~~~~~~~~~-~~~~~~~--~~~-~~~~~---~ 376 (481)
T TIGR00879 306 YSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR--FGRRPLLLIGAAGMA-ICLFVLG--ILG-ASFVT---G 376 (481)
T ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH--hcchHHHHHHHHHHH-HHHHHHH--HHh-hcccC---C
Confidence 111111 234455555677778888999999999999999 678887666543322 1111111 100 00010 0
Q ss_pred CcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 340 KRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
. + .. ..........++.+++..++.+..+.++.+.+ |+++|+++.++.....+++.++.-.+.+
T Consensus 377 ~--~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~lg~~i~~~~~~ 440 (481)
T TIGR00879 377 S--S-KS--SGNVAIVFILLFIAFFAMGWGPVPWVIVSEIF-PLSLRPKGISIAVAANWLANFIVGFLFP 440 (481)
T ss_pred c--c-cc--hhHHHHHHHHHHHHHHHccccCeehhhhhccC-ChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00 12223334444455555566666666778998 7889999999999999988887766543
No 8
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.90 E-value=6.4e-22 Score=203.58 Aligned_cols=318 Identities=12% Similarity=-0.008 Sum_probs=184.4
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...++...+..+++++.|+++||+|||+++.++.+...+.... +. .+++.+.++++|++.|+|.|...+..
T Consensus 51 s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~--~~-~~~~~~~l~~~r~l~G~g~g~~~~~~ 127 (426)
T PRK12307 51 TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGL--SG-LASGVIMLTLSRFIVGMGMAGEYACA 127 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH--HH-HHhHHHHHHHHHHHHHHHHhhHHHHH
Confidence 3455566777888888999999999999999999999999988773332 22 35689999999999999999988888
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCccc--cc
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRV--IR 214 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~--~r 214 (479)
..++.|+.|+++|+++++++.....+|.++++.+...+.. ..+|+.......+..+..+......|+++. ++
T Consensus 128 ~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~------~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~ 201 (426)
T PRK12307 128 STYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE------AYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEA 201 (426)
T ss_pred HHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc------cCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHh
Confidence 9999999999999999999999999999999877654421 234543221122111111111111233221 11
Q ss_pred CCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHH----Hhhh--hhhccccccc-cccccchhhhHHHHHHHHHHH
Q 011720 215 DDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAW----ASNF--FYSYQFNNVN-GLMFNLRTRGLNNVFYWGAQM 287 (479)
Q Consensus 215 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~----~~~~--~~s~~~~~~~-~~~f~~~~~~l~~~~~~i~~~ 287 (479)
+.+.+. .+++.......++..+.+++|++........ ..+. .....++.+. ..+++....++.....+++.+
T Consensus 202 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 280 (426)
T PRK12307 202 KLSGKG-KHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTV 280 (426)
T ss_pred hhhccc-cccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 100000 0000111100011223334444322221111 1110 0111113322 223444555666677888999
Q ss_pred HHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHH
Q 011720 288 LGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAM 367 (479)
Q Consensus 288 i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 367 (479)
++.++.|++.|| ++||+....+..... +.... ... .. . ........+.+..++...+
T Consensus 281 ~g~~~~g~l~dr--~~~~~~~~~~~~~~~-~~~~~----~~~---~~----------~---~~~~~~~~~~~~~~~~~~~ 337 (426)
T PRK12307 281 LGNIVWGLCADR--IGLKKTFSIGLLMSF-LFIFP----LFR---IP----------Q---DNYLLLGACLFGLMATNVG 337 (426)
T ss_pred HHHHHHHHHHHH--hccHHHHHHHHHHHH-HHHHH----HHH---Hc----------c---ccHHHHHHHHHHHHHhccc
Confidence 999999999999 678876554433221 11111 100 00 0 1111111111222222233
Q ss_pred HHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 368 FQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 368 ~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
..+..+.++.+.+ |+++|+++.|+.....+++..++..+.
T Consensus 338 ~~~~~~~~~~~~~-p~~~~g~~~g~~~~~~~~~~~~gp~~~ 377 (426)
T PRK12307 338 VGGLVPKFLYDYF-PLEVRGLGTGLIYNLAATSGTFNSMAA 377 (426)
T ss_pred HhHHHHHHHHHhC-cHHHHhhhhhHHHHHHhHHHHHHHHHH
Confidence 3444556678888 788999999999888888887776654
No 9
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.90 E-value=2.7e-22 Score=209.52 Aligned_cols=331 Identities=12% Similarity=0.050 Sum_probs=191.5
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhh------c---cCchhhHHHHHHHHhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYN------H---HHDQTFAVVAGAVLGI 127 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~------~---~~~~~~li~~R~i~G~ 127 (479)
++...+...+....+..+++++.|+++||+|||++++++.+++.+......... . ..+.+.++++|+++|+
T Consensus 53 ~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~ 132 (479)
T PRK10077 53 ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGI 132 (479)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhh
Confidence 344566778888888999999999999999999999999998876433222110 0 1224678999999999
Q ss_pred hhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccC--Ccccccchh-HHHHHHHHHHHHHHHH
Q 011720 128 GAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRT--DAESVNDKT-YIAFMCFMSAGAALSL 204 (479)
Q Consensus 128 g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~--~~~~~~~~~-~~i~~~l~~l~~~l~~ 204 (479)
+.|...+...++++|+.|+++||+.++++.....+|..++++++..+..... ....++|+. +++..+..++..+. .
T Consensus 133 ~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~ 211 (479)
T PRK10077 133 GVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-L 211 (479)
T ss_pred hHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-H
Confidence 9999999999999999999999999999999999999998887765532110 012345653 33333333333332 3
Q ss_pred hccCCcccc-----cCCCCcccc---cccCCHHHHHHHHHHHh-----hchHHHH------H--HHHHHHhhhh-h---h
Q 011720 205 AILPPSRVI-----RDDGTRCTN---IKYSKVSTEAIEILKLF-----RNWKMLL------L--FPAAWASNFF-Y---S 259 (479)
Q Consensus 205 ~~~~~~~~~-----r~d~~~~~~---~~~~~~~~~~~~~~~~~-----~~~r~ll------~--~~~~~~~~~~-~---s 259 (479)
++.||++.. |.|+.+... ...+..++..++..+.. +.++.+. . .....+++.. + .
T Consensus 212 ~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (479)
T PRK10077 212 YFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVL 291 (479)
T ss_pred HcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHH
Confidence 445654421 111100000 00011111111111111 0111110 0 0011111110 0 0
Q ss_pred ccccccc-cccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCC
Q 011720 260 YQFNNVN-GLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDP 338 (479)
Q Consensus 260 ~~~~~~~-~~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (479)
+..+.+. ..+++.....+.....++..++++++.+++.|| +|||+..+.+...+.+....+. .. . ..
T Consensus 292 ~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr--~g~r~~~i~~~~~~~v~~~~l~---~~--~-~~---- 359 (479)
T PRK10077 292 YYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK--FGRKPLQIIGALGMAIGMFSLG---TA--F-YT---- 359 (479)
T ss_pred HHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH--hcChHHHHHhHHHHHHHHHHHH---HH--H-hc----
Confidence 1101111 122333334455567788899999999999999 7899887777655432221111 10 0 00
Q ss_pred CCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 339 PKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
+ . ........+.++...+...+.+..+.++.|.+ |+++|+++.++....++++..++..+.|
T Consensus 360 ----~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~~~~~~~g~~~~~~~~p 421 (479)
T PRK10077 360 ----Q-A---PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIF-PNAIRGKALAIAVAAQWIANYFVSWTFP 421 (479)
T ss_pred ----C-c---ccHHHHHHHHHHHHHHhccccchhHHHhHhhC-ChhHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 0 1 12222222222222333345566778899999 7899999999999999999988755544
No 10
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.89 E-value=3.1e-21 Score=197.26 Aligned_cols=312 Identities=19% Similarity=0.154 Sum_probs=196.8
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+....+..+++++.|+++||+|||+.+.++.++..+... ... .++|.+.+++.|++.|++.+...+..
T Consensus 48 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~l~G~~~~~~~~~~ 124 (406)
T PRK11551 48 DVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSL--ATA-QAWDFPSLLVARLLTGVGLGGALPNL 124 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH--HHH-HhccHHHHHHHHHHHHhhHHHHHHHH
Confidence 455666777778888899999999999999999999999887666322 222 35789999999999999999988888
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
..++.|+.|+++|++.+++++....+|..+++.++..+.. ..+|+ .+++..++.++..++..++.||++..++
T Consensus 125 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 198 (406)
T PRK11551 125 IALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG------DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQ 198 (406)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHh
Confidence 8999999999999999999999999999999888754421 23454 2333333333333333344454332111
Q ss_pred CCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHh--hh--hhhccccccc-cccccchhhhHHHHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWAS--NF--FYSYQFNNVN-GLMFNLRTRGLNNVFYWGAQMLGS 290 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~--~~--~~s~~~~~~~-~~~f~~~~~~l~~~~~~i~~~i~~ 290 (479)
++.+ .+.++.. .+..++..+.++.+.+....+.. .. ...+. +.+. ..+++..+.++.....+++.+++.
T Consensus 199 ~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~g~s~~~~~~~~~~~~~~~~~~~ 272 (406)
T PRK11551 199 AAGA--GKQRAPV---LRALFGEGRATATLLLWISYFFTLIVLYFLLNWL-PSLLVGQGLSRSQAGLVQIAFNIGGALGS 272 (406)
T ss_pred ccCc--chhhhhh---HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCChhhhhHHHHHHHHHHHHHH
Confidence 1000 0001111 11112211112222111111111 11 11111 2332 234555566777778889999999
Q ss_pred HHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHH
Q 011720 291 VGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQS 370 (479)
Q Consensus 291 ~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (479)
++.|++.|| +|||+....+...+. +.+.. +. +. ++.....+..++.|+...+.++
T Consensus 273 ~~~g~l~dr--~g~~~~~~~~~~~~~-~~~~~----~~----~~--------------~~~~~~~~~~~~~g~~~~~~~~ 327 (406)
T PRK11551 273 LLIGALMDR--LRPRRVVLLIYAGIL-ASLAA----LA----AA--------------PSFAGMLLAGFAAGLFVVGGQS 327 (406)
T ss_pred HHHHHHHHH--HhHHHHHHHHHHHHH-HHHHH----HH----hc--------------CcHHHHHHHHHHHHHHHHhHHH
Confidence 999999999 678775544332211 11111 10 00 1122334455667777777778
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 371 MVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 371 ~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
..+.+..+.+ |+++|+++.++.+....++..++..+..
T Consensus 328 ~~~~~~~~~~-p~~~~g~~~g~~~~~~~~g~~~g~~~~g 365 (406)
T PRK11551 328 VLYALAPLFY-PTQVRGTGVGAAVAVGRLGSMAGPLLAG 365 (406)
T ss_pred HHHHHHHHHc-chhhhhhhhhHHHHhhhHHHHHHhhhHh
Confidence 7788888999 7889999999999999999888877654
No 11
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=5.1e-21 Score=189.33 Aligned_cols=340 Identities=16% Similarity=0.173 Sum_probs=225.6
Q ss_pred cccchhHHHHHHHHHHhhhhh----hhhhhhcCCCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhH
Q 011720 22 RYNSPLVQVSLIGLVCFCCPG----MFNALSGMGGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCS 97 (479)
Q Consensus 22 ~~~~~~~~~~~~~~~~f~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~ 97 (479)
+-++.+..++.+.+..|+... ...-++.+..+-..+....+...+.+-.+.++++++...+.||+.||+.++....
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~ 86 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA 86 (394)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence 344455566777766666532 1112344444444566677778888889999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhc
Q 011720 98 TYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYH 177 (479)
Q Consensus 98 ~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~ 177 (479)
+|.+ +.+..+.++|+++++++|++.|+..|.+|+....+..++.||++|++++++.....+++.++|.-++..+..
T Consensus 87 lFi~---~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~- 162 (394)
T COG2814 87 LFIV---SNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ- 162 (394)
T ss_pred HHHH---HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH-
Confidence 8876 444444689999999999999999999999999999999999999999999999999999988877776642
Q ss_pred cCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHH--Hh
Q 011720 178 RTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAW--AS 254 (479)
Q Consensus 178 ~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~--~~ 254 (479)
.++|| .|++...+..+..+......||+.. + + +++. +.++.++.+++|+.+......+ +.
T Consensus 163 -----~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~--~-~-----~~~~----~~~~~~~~l~~p~v~~~l~~t~l~~~ 225 (394)
T COG2814 163 -----LFGWRATFLAIAVLALLALLLLWKLLPPSEI--S-G-----SLPG----PLRTLLRLLRRPGVLLGLLATFLFMT 225 (394)
T ss_pred -----HhhHHHHHHHHHHHHHHHHHHHHHhCCCccC--C-C-----CCCc----chhHHHHHhcCchHHHHHHHHHHHHc
Confidence 25675 4555555555555555555662211 0 0 0111 2344556778887766444322 33
Q ss_pred hh--hhhcccccccc--ccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhh
Q 011720 255 NF--FYSYQFNNVNG--LMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQ 330 (479)
Q Consensus 255 ~~--~~s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~ 330 (479)
+. .|+|. ..++. .+++....++....+|++.++|+.++|++.|| +.|+........+. +.... +.
T Consensus 226 g~F~~ftYi-~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr---~~~~~l~~~~~l~a-~~~l~----l~-- 294 (394)
T COG2814 226 GHFALYTYI-RPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR---GPRRALIAALLLLA-LALLA----LT-- 294 (394)
T ss_pred chhhhHHhH-HHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc---cchhHHHHHHHHHH-HHHHH----HH--
Confidence 32 25565 44443 45677788888899999999999999999998 23433332222221 11111 10
Q ss_pred cccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 011720 331 LNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDTH 410 (479)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~ 410 (479)
+ .. .+........+++|+....-......-.++. .|+.+..+.+++....++|.+.+-.+...
T Consensus 295 --~-----------~~--~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~--~p~~~~~a~sl~~aa~nlgia~GA~lGG~ 357 (394)
T COG2814 295 --F-----------TG--ASPALALALLFLWGFAFSPALQGLQTRLARL--APDAADLAGSLNVAAFNLGIALGAALGGL 357 (394)
T ss_pred --H-----------hc--chHHHHHHHHHHHHHHhhhhhhHHHHHhccc--CCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 11 1222333344446666554443222334442 35777899999999999999998777643
No 12
>PRK03545 putative arabinose transporter; Provisional
Probab=99.88 E-value=1.7e-20 Score=190.93 Aligned_cols=308 Identities=14% Similarity=0.092 Sum_probs=194.4
Q ss_pred CCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhh
Q 011720 51 GGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAG 130 (479)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g 130 (479)
..+-+.++...+...+.....++++.++.|+++||+|||+.+.++.+++.+... .+. .++|++.++++|+++|++.+
T Consensus 36 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~--~~~-~~~~~~~l~~~r~~~G~~~~ 112 (390)
T PRK03545 36 AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHV--LSA-LAWNFTVLLISRIGIAFAHA 112 (390)
T ss_pred HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH--HHH-HhccHHHHHHHHHHHHHHHH
Confidence 333334556667777778888899999999999999999999999888776332 222 36789999999999999999
Q ss_pred hhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCC
Q 011720 131 LLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPP 209 (479)
Q Consensus 131 ~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~ 209 (479)
..++...+++.|+.|+++|++.+|++.....+|..+|+.+...+.. ..+|+ .+++..++.++..++.....|+
T Consensus 113 ~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~------~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 186 (390)
T PRK03545 113 IFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ------YLGWRTTFLAIGGGALITLLLLIKLLPL 186 (390)
T ss_pred HHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH------HhcHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9888888999999999999999999999999999999988775532 13444 3444344333333333333343
Q ss_pred cccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHh---hh-hhhcccccccc--ccccchhhhHHHHHHH
Q 011720 210 SRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWAS---NF-FYSYQFNNVNG--LMFNLRTRGLNNVFYW 283 (479)
Q Consensus 210 ~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~---~~-~~s~~~~~~~~--~~f~~~~~~l~~~~~~ 283 (479)
++. ++ +.+ .++..+.+++|+++......+.. .+ ..++. ..+.. .+++..+.++.....+
T Consensus 187 ~~~-~~---------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~g~s~~~~~~~~~~~~ 251 (390)
T PRK03545 187 LPS-EH---------SGS----LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYI-EPFVQQVAGLSENFATLLLLLFG 251 (390)
T ss_pred CCC-CC---------cch----HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCccHHHHHHHHHH
Confidence 221 10 011 12233445566554322221111 11 11221 22221 2345555677777788
Q ss_pred HHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHh
Q 011720 284 GAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGL 363 (479)
Q Consensus 284 i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (479)
++.+++.++.+++.|| .+||+. ..+...+ ...... ... . . .+........+++|+
T Consensus 252 ~~~~~g~~~~g~l~dr--~~~~~~-~~~~~~~---~~~~~~--l~~---~------------~--~~~~~~~~~~~l~g~ 306 (390)
T PRK03545 252 GAGIIGSVLFSRLGNR--HPSGFL-LIAIALL---LVCLLL--LLP---A------------A--NSEWHLSVLSIFWGI 306 (390)
T ss_pred HHHHHHHHHHHHHhhc--cchhHH-HHHHHHH---HHHHHH--HHH---H------------h--chHHHHHHHHHHHHH
Confidence 8999999999999999 567653 2222111 111110 100 0 0 112233445566677
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 364 LDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 364 ~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
......+.....+.+.. +++|+++.+++.....+|..++..+..
T Consensus 307 ~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~G~~~~G 350 (390)
T PRK03545 307 AIMCIGLAMQVKVLKLA--PDATDVAMALFSGIFNIGIGAGALLGN 350 (390)
T ss_pred HHhcchHHHHHHHHHhC--CCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66655555555666666 467899999999988888888877654
No 13
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.88 E-value=9.4e-21 Score=195.66 Aligned_cols=321 Identities=15% Similarity=0.064 Sum_probs=190.9
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...+...+.......+++++.|++.||+|||+.+.++.++..+.. .+.. .+++.+.+++.|++.|++.|..++.
T Consensus 55 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~--~~~~-~~~~~~~l~~~~~l~g~~~g~~~~~ 131 (434)
T PRK11663 55 LSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIIN--ILFG-FSSSLWAFALLWVLNAFFQGWGWPV 131 (434)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHH--HHHH-HHhHHHHHHHHHHHHHHHHHccchH
Confidence 445566677778888899999999999999999999999998877632 2222 3578899999999999999998888
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchh-HHHHHHHHHHHHHHHHhccCCccccc
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKT-YIAFMCFMSAGAALSLAILPPSRVIR 214 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~~~r 214 (479)
...++.|+.|+++||+.+++++...++|.++|+.+...+.. .++|+. +.+..++.++..++..+..|+++..+
T Consensus 132 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~------~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~ 205 (434)
T PRK11663 132 CAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL------HYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAM 205 (434)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhc
Confidence 88999999999999999999999999999999988766532 134542 33333333332222233333332111
Q ss_pred ---C------CCCcccccccCCHHHHHHHHHH--HhhchHHHHHHHHHHHhhhhhhc---ccccccc--ccccchhhhHH
Q 011720 215 ---D------DGTRCTNIKYSKVSTEAIEILK--LFRNWKMLLLFPAAWASNFFYSY---QFNNVNG--LMFNLRTRGLN 278 (479)
Q Consensus 215 ---~------d~~~~~~~~~~~~~~~~~~~~~--~~~~~r~ll~~~~~~~~~~~~s~---~~~~~~~--~~f~~~~~~l~ 278 (479)
+ +..+...+. +....+.++.++ .+++|++++.....+.....+.. .++.++. .+++..+.++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~ 284 (434)
T PRK11663 206 GLPSVGEWRHDALELAQQQ-EGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSA 284 (434)
T ss_pred CCCCcccccccccccchhc-cccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHH
Confidence 0 000000000 000001222222 34566666554433322221111 1133432 24555566777
Q ss_pred HHHHHHHHHHHHHHhhhhccccccCccceee-ehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHH
Q 011720 279 NVFYWGAQMLGSVGIGYVMDFSFQSLRTRGL-VGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVL 357 (479)
Q Consensus 279 ~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (479)
...++++.+++.++.|++.||..-+||+... .....+ +..... +.. . . . .........
T Consensus 285 ~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~--~~~~~~---~~~-~--~----------~---~~~~~~~~~ 343 (434)
T PRK11663 285 VSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGI--LLSVGS---LWL-M--P----------F---ASYVMQAAC 343 (434)
T ss_pred HHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHH--HHHHHH---HHH-c--c----------c---ccHHHHHHH
Confidence 7778899999999999999994212222211 111111 111111 100 1 1 0 111122223
Q ss_pred HHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 358 YFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 358 ~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
++..|++....+....+..++.+ +++.|+++.|+.+....+|.+++..+.
T Consensus 344 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~p~~~ 393 (434)
T PRK11663 344 FFTIGFFVFGPQMLIGMAAAECS-HKEAAGAATGFVGLFAYLGAALSGYPL 393 (434)
T ss_pred HHHHHHHHhhHHHHHHHHHHhcc-cHhhHHhHHHHHHHHHHHHHHHhcccH
Confidence 33344443333433455677888 788999999999999988888875543
No 14
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.88 E-value=1.3e-20 Score=192.07 Aligned_cols=348 Identities=10% Similarity=0.002 Sum_probs=203.4
Q ss_pred CCCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhh
Q 011720 50 MGGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGA 129 (479)
Q Consensus 50 l~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~ 129 (479)
+.++.+.+....+...+..+.++++++++.|++.||+|||+++..+.+++.+. ...+. .++|++.++++|+++|+|.
T Consensus 35 i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~--~~~~~-~a~~~~~ll~~r~l~Gig~ 111 (393)
T PRK09705 35 LRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVG--ALMRE-LYPQSALLLSSALLGGVGI 111 (393)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHH--HHHHH-HCcchHHHHHHHHHHHhHH
Confidence 33333445667778888899999999999999999999999999999998873 33333 4688999999999999999
Q ss_pred hhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhH-HHHHHHHHHHHHHHHhccC
Q 011720 130 GLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTY-IAFMCFMSAGAALSLAILP 208 (479)
Q Consensus 130 g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~-~i~~~l~~l~~~l~~~~~~ 208 (479)
+..++....++.++.| ++|++.++++.....+|..+|+.+...+..+. .+|+.. ..+....++..+..++..+
T Consensus 112 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~-----~~w~~~~~~~~~~~~~~~~~~~~~~~ 185 (393)
T PRK09705 112 GIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS-----ETWYQTLAWWALPAVVALFAWWWQSA 185 (393)
T ss_pred HHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998888889888875 88999999999999999999988876553221 235422 1222222222222222222
Q ss_pred CcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhh----hccccccc-cccccchhhhHHHHHHH
Q 011720 209 PSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFY----SYQFNNVN-GLMFNLRTRGLNNVFYW 283 (479)
Q Consensus 209 ~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~----s~~~~~~~-~~~f~~~~~~l~~~~~~ 283 (479)
+++.+++ + + +.. ..+.+++|+.+.+..........+ .+. +.+. ..+++..+.++....++
T Consensus 186 ~~~~~~~--~----~-~~~-------~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l-p~~l~~~g~s~~~ag~~~~~~~ 250 (393)
T PRK09705 186 REVASSH--K----T-TTT-------PVRVVFTPRAWTLGVYFGLINGGYASLIAWL-PAFYIEIGASAQYSGSLLALMT 250 (393)
T ss_pred CCCcccc--C----C-CcC-------CcccccCHhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCChhhhhHHHHHHH
Confidence 1111000 0 0 000 012234455443332222222111 111 3332 23455566777777889
Q ss_pred HHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHh
Q 011720 284 GAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGL 363 (479)
Q Consensus 284 i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (479)
++.+++.++.+++.|| .+||+..+.+..... +.... +.. .+ ...... ..++.|+
T Consensus 251 i~~i~g~~~~g~l~~r--~~~~~~~~~~~~l~~-~~~~~----~~~---~~--------------~~~~~~--~~~l~g~ 304 (393)
T PRK09705 251 LGQAAGALLMPAMARH--QDRRKLLMLALVLQL-VGFCG----FIW---LP--------------LQLPVL--WAMVCGL 304 (393)
T ss_pred HHHHHHHHHHHHHHhh--ccchHHHHHHHHHHH-HHHHH----HHH---cc--------------chHHHH--HHHHHHH
Confidence 9999999999999999 678876555533221 11111 110 11 000111 1223455
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCcchhHHHHHHHHHHHhhhhhhheeeeeEeccC
Q 011720 364 LDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDTHKVSLLSQLIINWSLTTVSYPLLVVLVMLAVKDD 443 (479)
Q Consensus 364 ~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~~pet 443 (479)
..+...+.......+...+++++++.+++.+....++..++..+..........+...+.+..+..+......+...|||
T Consensus 305 g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 305 GLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred hccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 55555554544444555356778899988888887776666444322111111222333333333333344445677999
Q ss_pred CCCC
Q 011720 444 DKSK 447 (479)
Q Consensus 444 ~~~~ 447 (479)
++.|
T Consensus 385 ~~~~ 388 (393)
T PRK09705 385 FPQL 388 (393)
T ss_pred ccch
Confidence 7443
No 15
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.88 E-value=4.3e-20 Score=189.38 Aligned_cols=333 Identities=12% Similarity=-0.016 Sum_probs=194.5
Q ss_pred cCCCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhh
Q 011720 49 GMGGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIG 128 (479)
Q Consensus 49 ~l~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g 128 (479)
.+..+...++...+...++.+.++++++++.|+++||+|||+.+.++.+++.+.. .... .++|.+.++++|++.|++
T Consensus 33 ~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~--~~~~-~~~~~~~l~~~r~l~G~~ 109 (412)
T TIGR02332 33 TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIAS--TATM-FATGPESLYLLRILVGIA 109 (412)
T ss_pred hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHH--HHHH-HhcCHHHHHHHHHHHHHH
Confidence 3444434456667778888999999999999999999999999999998887733 3332 467899999999999999
Q ss_pred hhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhcc
Q 011720 129 AGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAIL 207 (479)
Q Consensus 129 ~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~ 207 (479)
.+..+++...++.|+.|+++||+.+++++....+|..+|+.++..+..........+|+ .|.+..+..++..++..++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~ 189 (412)
T TIGR02332 110 EAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWL 189 (412)
T ss_pred HhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhcc
Confidence 99998888889999999999999999999999999999999877654211000123454 34333333333333334444
Q ss_pred CCccccc----CCCCcc----------cccccC----CHHHHHHHHHHHhhchHHHHHHHHHHHhhhhh---hccccccc
Q 011720 208 PPSRVIR----DDGTRC----------TNIKYS----KVSTEAIEILKLFRNWKMLLLFPAAWASNFFY---SYQFNNVN 266 (479)
Q Consensus 208 ~~~~~~r----~d~~~~----------~~~~~~----~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~---s~~~~~~~ 266 (479)
||++.++ +++.+. +.+.++ ......+..++..+++.+++.....+.....+ ...++.++
T Consensus 190 ~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l 269 (412)
T TIGR02332 190 DDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIFTPAIMLYTLAYFCLTNTLSAINIWTPQIL 269 (412)
T ss_pred CCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443211 000000 000000 00001122334344555554443333222111 11124444
Q ss_pred cc---cccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCccc
Q 011720 267 GL---MFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLD 343 (479)
Q Consensus 267 ~~---~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (479)
.. +++..+.++......++.+++.++.|++.|| ++||+...........+ .+. .. . .. +
T Consensus 270 ~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr--~~~r~~~~~~~~~~~~~---~~~--~~--~-~~--------~ 331 (412)
T TIGR02332 270 QSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDR--LKERKHHTALPYLFAAA---GWL--LA--S-AT--------D 331 (412)
T ss_pred HhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcc--cCccHHHHHHHHHHHHH---HHH--HH--H-hc--------C
Confidence 32 2344455677778899999999999999999 56665322111111111 111 10 0 00 0
Q ss_pred ccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 344 FKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
+ +......+. +.+++.....+..+....+.+ ++++|+++.|+.+...++|.+++..+..
T Consensus 332 --~--~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~-~~~~~~~a~g~~~~~~~~g~~~~p~~~g 390 (412)
T TIGR02332 332 --H--NLIQLLGII--MASMGSFSAMAIFWTTPDQSI-SLQARAIAIAVINATGNIGSALSPFLIG 390 (412)
T ss_pred --C--HHHHHHHHH--HHHHHhhhhhhHHHhhccccc-chHHHHHHHHHHHHhhhhhhhhhhhhcc
Confidence 1 111111111 122222122222233334556 7889999999999999999988866554
No 16
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.88 E-value=3.7e-21 Score=200.53 Aligned_cols=355 Identities=13% Similarity=0.019 Sum_probs=202.8
Q ss_pred ccccchhHHHHHHHHHHhhhhhh----h-hhhhcCCCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhh
Q 011720 21 FRYNSPLVQVSLIGLVCFCCPGM----F-NALSGMGGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAG 95 (479)
Q Consensus 21 ~~~~~~~~~~~~~~~~~f~~~~~----~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig 95 (479)
+.|+|.+.+++.+..+.++...+ + .+...+..+-+.+....+...+.++.+++++.++.|+++||+|||+.+.++
T Consensus 21 ~~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~ 100 (467)
T PRK09556 21 KMWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFL 100 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHH
Confidence 45666666666666555543211 0 112222333233455566777788888999999999999999999999888
Q ss_pred hHHHHHHHHHH--HhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhh
Q 011720 96 CSTYVLYAGSF--LYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFI 173 (479)
Q Consensus 96 ~~~~~i~~~~~--~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~ 173 (479)
.++..+..... +....++|.+.+++.|+++|++.+..++....+++|+.|+++||+++|++.....+|.++|+.+...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~ 180 (467)
T PRK09556 101 LILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALW 180 (467)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHH
Confidence 77665532221 1111357899999999999999999999888999999999999999999999999999999887654
Q ss_pred hhhccCCcccccchh-HHHHHHHHHHHHHHHHhccCCccc--cc-CCCC----c--ccc--cccCCHHHHHHHH-HH-Hh
Q 011720 174 MNYHRTDAESVNDKT-YIAFMCFMSAGAALSLAILPPSRV--IR-DDGT----R--CTN--IKYSKVSTEAIEI-LK-LF 239 (479)
Q Consensus 174 i~~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~~--~r-~d~~----~--~~~--~~~~~~~~~~~~~-~~-~~ 239 (479)
..... ...+|+. +.+..++.++..++.+++.++++. +. ++++ . .+. .++++. ..++. .+ .+
T Consensus 181 ~~~~~---~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 255 (467)
T PRK09556 181 GANYF---FDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDM--TKWQIFVEYVL 255 (467)
T ss_pred HHHhh---ccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccC--cHHHHHHHHHH
Confidence 32210 0112432 333333333333333333332221 10 0000 0 000 000000 01111 12 45
Q ss_pred hchHHHHHHHHHHHhhhhh---hcccccccc--ccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhh
Q 011720 240 RNWKMLLLFPAAWASNFFY---SYQFNNVNG--LMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGI 314 (479)
Q Consensus 240 ~~~r~ll~~~~~~~~~~~~---s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~ 314 (479)
++|+++......+..+..+ ....+.+.. .+++..+.++......++.+++.++.|+++|| ++||+........
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr--~g~r~~~~~~~~~ 333 (467)
T PRK09556 256 KNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL--ANGRRALVACIAL 333 (467)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCchHHHHHHH
Confidence 6777766554433332211 111244432 34555666777777888999999999999999 6677644332211
Q ss_pred hHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHH
Q 011720 315 VALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYK 394 (479)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~ 394 (479)
.. +...+ .... . . .+.....+..+..|+...+.....+....+.+ |++.|+++.|+.+
T Consensus 334 ~~-~~~~~----~~~~--~-----------~---~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-p~~~~g~a~gi~~ 391 (467)
T PRK09556 334 AL-IIFTL----GVYQ--H-----------A---TSEYMYLASLFALGFLVFGPQLLIGVAAVGFV-PKKAIGVANGIKG 391 (467)
T ss_pred HH-HHHHH----HHHH--h-----------c---CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhc-chhhHHHHHHHHH
Confidence 11 11101 1110 0 0 11122233344455433333333344556888 7889999999999
Q ss_pred HHHHH-HHHHH
Q 011720 395 GVQSA-GAAVA 404 (479)
Q Consensus 395 ~~~~~-g~~i~ 404 (479)
...++ |.+++
T Consensus 392 ~~g~l~g~~~~ 402 (467)
T PRK09556 392 TFAYLFGDSFA 402 (467)
T ss_pred HHHHHHhHHHH
Confidence 88876 53443
No 17
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.87 E-value=3.6e-20 Score=188.48 Aligned_cols=322 Identities=13% Similarity=0.054 Sum_probs=190.8
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...+...++......++.++.|+++||+|||+.+.++.++..+. ..... .+++++.+++.|++.|++.+..++.
T Consensus 44 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~--~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~ 120 (405)
T TIGR00891 44 LTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG--TLACG-FAPGYITMFIARLVIGIGMGGEYGS 120 (405)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH--HHHHH-HhccHHHHHHHHHHHHhhhhhhhHH
Confidence 34455666777888889999999999999999999999998877763 22222 3578999999999999999999999
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCccc--c
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRV--I 213 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~--~ 213 (479)
...++.|+.|+++|++.++++.....+|.++|+.+...+... .+.+|+......++..+..++.....||++. +
T Consensus 121 ~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~----~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (405)
T TIGR00891 121 SAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV----WGDGWRALFFISILPIIFALWLRKNIPEAEDWKE 196 (405)
T ss_pred HHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHH
Confidence 999999999999999999999999999999999887765432 1123543222222222212222233344321 1
Q ss_pred cCCCCccccc-------ccCCHHHHHHH----HHHHhhchH--HHHHHHHHHHhhhhh---hcccccccc--ccccchhh
Q 011720 214 RDDGTRCTNI-------KYSKVSTEAIE----ILKLFRNWK--MLLLFPAAWASNFFY---SYQFNNVNG--LMFNLRTR 275 (479)
Q Consensus 214 r~d~~~~~~~-------~~~~~~~~~~~----~~~~~~~~r--~ll~~~~~~~~~~~~---s~~~~~~~~--~~f~~~~~ 275 (479)
++++.+...+ .++..++..++ ..+..++++ +..+.......++.. ...++.+.. .+++..+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 276 (405)
T TIGR00891 197 KHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTV 276 (405)
T ss_pred HhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHH
Confidence 1111000000 00000110111 111111111 111111111111111 111133322 24455566
Q ss_pred hHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHH
Q 011720 276 GLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPF 355 (479)
Q Consensus 276 ~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (479)
++.....+++.+++.++.+++.|| +|||+....+..... ..... . . . .. .......
T Consensus 277 ~~~~~~~~~~~~~g~~~~g~l~dr--~g~~~~~~~~~~~~~---~~~~~--~-~-~-~~--------------~~~~~~~ 332 (405)
T TIGR00891 277 ANIVVFSNIGAIVGGCVFGFLGDW--LGRRKAYVCSLLAGQ---LLIIP--V-F-A-IG--------------ANVAVLG 332 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hCchhhhHHHHHHHH---HHHHH--H-H-H-hC--------------CchHHHH
Confidence 777778899999999999999999 678876554432211 11110 0 0 0 00 1112222
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 356 VLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 356 ~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
+..++.++......+..+.++.+.. |+++|+++.|+.+...+++..++..+..
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~g~~~~g 385 (405)
T TIGR00891 333 LGLFFQQMLVQGIWGILPKHLGEYF-PTDQRAAGLGFTYQLGNLGGALAPIIGA 385 (405)
T ss_pred HHHHHHHHHHccchhhHHHHHhhhC-CcchhHHHhhHHHHHHHHHHHHHHHHHH
Confidence 3323344444444555667788988 7889999999999988888888766553
No 18
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.87 E-value=6.4e-26 Score=235.15 Aligned_cols=363 Identities=13% Similarity=0.134 Sum_probs=216.0
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccC---chhhHHHHHHHHhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHH---DQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~---~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
......+..+.+..+|+++.|.++||+|||+++.++.+++.+ +..+.. .++ |.+.+.++|++.|+|.|...+..
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i--~~~~~~-~~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMII--GSILIA-FAPSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccccccccccccccccccc--cccccc-ccccccccccccccccccccccccccccc
Confidence 345667788888999999999999999999999999998877 333332 456 89999999999999999999999
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCccc----
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRV---- 212 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~---- 212 (479)
+.|+.|++|+++||+..++++....+|.+++.++........ .++.|+.......+..+..++..++.||+|.
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~---~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~ 200 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS---DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLS 200 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccceecc
Confidence 999999999999999999999999999999988877653221 1245665433333322222333456676642
Q ss_pred -ccCCCCcccccc-------cCCHH---HH----------HHHHHHHhh-chHHHHHHHHHHHhhhhh---hcccccccc
Q 011720 213 -IRDDGTRCTNIK-------YSKVS---TE----------AIEILKLFR-NWKMLLLFPAAWASNFFY---SYQFNNVNG 267 (479)
Q Consensus 213 -~r~d~~~~~~~~-------~~~~~---~~----------~~~~~~~~~-~~r~ll~~~~~~~~~~~~---s~~~~~~~~ 267 (479)
+|.|+++...++ +++.+ ++ +++.++..+ ++++++...+.+.+++.. ...+....-
T Consensus 201 ~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~ 280 (451)
T PF00083_consen 201 KGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIF 280 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccc
Confidence 233322111000 00000 00 111122111 223433333333332211 001111111
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCC
Q 011720 268 LMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTS 347 (479)
Q Consensus 268 ~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (479)
...+....-+.+...++..+++.++..++.|| +|||+..+.+...+.++...+. . . . ....+. + ++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~GRr~~~i~~~~~~~~~~~~~~-~-~-~-~~~~~~--~---~~--- 346 (451)
T PF00083_consen 281 ENAGISNSFLATLILGLVNFLGTLLAIFLIDR--FGRRKLLIIGLLLMAICSLILG-I-I-F-FLGVSS--S---SW--- 346 (451)
T ss_pred cccccccccccccccccccccccccccccccc--cccccccccccccccccccccc-c-c-c-cccccc--c---cc---
Confidence 11111111234455667777888888899999 7899988887655432221111 0 0 0 101110 0 11
Q ss_pred CCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCcchhHHHHHHHHHHHh
Q 011720 348 GNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDTHKVSLLSQLIINWSLTTV 427 (479)
Q Consensus 348 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~i~~~~~~~ 427 (479)
.....+.+..++...+..++.+..+.+.+|++ |.+.|+++.++...+.+++.++...+.+......... .....+..
T Consensus 347 -~~~~~i~~~~l~~~~~~~g~~~~~~~~~~Elf-Pt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~-~~~~i~~~ 423 (451)
T PF00083_consen 347 -WSILSIVFLALFFAFFSLGWGPLPWIYTAELF-PTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGW-GVFLIFAG 423 (451)
T ss_pred -cccccceeeeeccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc-ccchhhHH
Confidence 12233344444555666688887888889999 8999999999988888887777766655332111100 11112222
Q ss_pred hhhhhheeeeeEeccCCC
Q 011720 428 SYPLLVVLVMLAVKDDDK 445 (479)
Q Consensus 428 ~~~~~~~~v~~~~pet~~ 445 (479)
.+++...++++++|||.+
T Consensus 424 ~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 424 VCLIAIIFVYFFLPETKG 441 (451)
T ss_pred HHHHHHhheeEEEeeCCC
Confidence 223555678899999963
No 19
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.87 E-value=3.7e-20 Score=185.43 Aligned_cols=316 Identities=14% Similarity=0.074 Sum_probs=200.9
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhc--cCchhhHHHHHHHHhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNH--HHDQTFAVVAGAVLGIGAGLLWA 134 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~--~~~~~~li~~R~i~G~g~g~~~~ 134 (479)
++...+...++......+++++.|+++||+|||+.+.++.++..+.......... ..+.+.++++|++.|++.+..++
T Consensus 32 s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 111 (365)
T TIGR00900 32 SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTP 111 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777778888899999999999999999999998876553222222111 12789999999999999999999
Q ss_pred hhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchh-HHHHHHHHHHHHHHHHhccCCcccc
Q 011720 135 GQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKT-YIAFMCFMSAGAALSLAILPPSRVI 213 (479)
Q Consensus 135 ~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~~~ 213 (479)
+..+++.|+.|+++|++.++++.....+|.++|+.++..+... .+|+. +++..+..++..++.+++++|++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (365)
T TIGR00900 112 AYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT------LGIKWAIWVDAVGFAISALLIVSVRIPELAA 185 (365)
T ss_pred HHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH------hhHHHHHHHHHHHHHHHHHHHHhcccccCCC
Confidence 9999999999999999999999999999999999988766422 33442 3222222233323323333333211
Q ss_pred cCCCCcccccccCCHHHHHHHHHH-HhhchHHHHHHHHHHHhhhhh---h-cccccccc--ccccchhhhHHHHHHHHHH
Q 011720 214 RDDGTRCTNIKYSKVSTEAIEILK-LFRNWKMLLLFPAAWASNFFY---S-YQFNNVNG--LMFNLRTRGLNNVFYWGAQ 286 (479)
Q Consensus 214 r~d~~~~~~~~~~~~~~~~~~~~~-~~~~~r~ll~~~~~~~~~~~~---s-~~~~~~~~--~~f~~~~~~l~~~~~~i~~ 286 (479)
+ ++++ .+++..++.++.++ .+++|+++......+.....+ . ...+.+.. .+.+..+.++.....+++.
T Consensus 186 ~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (365)
T TIGR00900 186 S-EIQA----LSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGA 260 (365)
T ss_pred c-cccc----cchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 1 1110 01111222222223 335565544433322222111 0 11122222 2345556677777888999
Q ss_pred HHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHH
Q 011720 287 MLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDA 366 (479)
Q Consensus 287 ~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 366 (479)
+++.++.+++.|| .+||+....+..... ..... .. + .. .+.....+..++.|++.+
T Consensus 261 ~~~~~~~~~l~~~--~~~~~~~~~~~~~~~---~~~~~--~~----~-----------~~--~~~~~~~~~~~~~g~~~~ 316 (365)
T TIGR00900 261 LLGALLLGLLGRY--FKRMALMTGAIFVIG---LAILV--VG----L-----------TP--PNFPLFLVLWFAIGVGYG 316 (365)
T ss_pred HHHHHHHHHHHHH--hchhHHHHHHHHHHH---HHHHH--HH----h-----------hc--hhHHHHHHHHHHHHHHHH
Confidence 9999999999998 567775544432211 11110 10 0 01 113344566677888888
Q ss_pred HHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 367 MFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 367 ~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
...+....++.+.. |+++|+++.++++..++++..++..+.
T Consensus 317 ~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~ 357 (365)
T TIGR00900 317 PINVPQGTLLQRRV-PAELLGRVFGAQFSLSHAAWPLGLILA 357 (365)
T ss_pred HHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887888889998 789999999999999998888876554
No 20
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.87 E-value=5.6e-20 Score=193.02 Aligned_cols=352 Identities=14% Similarity=0.071 Sum_probs=215.1
Q ss_pred hhHHHHHHHHHHhhhhh----hhhhhhcCCCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHH
Q 011720 26 PLVQVSLIGLVCFCCPG----MFNALSGMGGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVL 101 (479)
Q Consensus 26 ~~~~~~~~~~~~f~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i 101 (479)
+|..+..+++..|+... ...+...+..+-+.++...+...+.+..+.+++.++.|+++||+|||+.++++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 44445555544455432 12233444433333455566677777788888889999999999999999999998887
Q ss_pred HHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhc-CCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCC
Q 011720 102 YAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTS-YPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTD 180 (479)
Q Consensus 102 ~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e-~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~ 180 (479)
++..+. .++|.+.++++|+++|+|.+...+.....+.+ ..|+++|++++|++.....+|..+||.++..+..+
T Consensus 84 --~~~~~~-~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~--- 157 (495)
T PRK14995 84 --ASLAAA-FSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH--- 157 (495)
T ss_pred --HHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---
Confidence 344443 46899999999999999999987766666655 45789999999999999999999999998876432
Q ss_pred cccccchhHHHHHHHHHHHHHHHHhccCCcccccCCCCc-cc-----------------ccc-cCCH-------------
Q 011720 181 AESVNDKTYIAFMCFMSAGAALSLAILPPSRVIRDDGTR-CT-----------------NIK-YSKV------------- 228 (479)
Q Consensus 181 ~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~r~d~~~-~~-----------------~~~-~~~~------------- 228 (479)
.+|+| .|++...+.++..++..++.|+++.+++++.. .. ... ..+.
T Consensus 158 -~gwr~-~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (495)
T PRK14995 158 -FYWGS-VFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALL 235 (495)
T ss_pred -CChHH-HHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Confidence 23444 34444444455444444555543321111000 00 000 0000
Q ss_pred -----HHHHHH-----HHHHhhchHHHHHHHHHHHhhh-h--hhcccccccc--ccccchhhhHHHHHHHHHHHHHHHHh
Q 011720 229 -----STEAIE-----ILKLFRNWKMLLLFPAAWASNF-F--YSYQFNNVNG--LMFNLRTRGLNNVFYWGAQMLGSVGI 293 (479)
Q Consensus 229 -----~~~~~~-----~~~~~~~~r~ll~~~~~~~~~~-~--~s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~~~~~ 293 (479)
..|.+. .++.+++|++.......+.... . ..+.++.+.+ .+++..+.++.....+++..+++++.
T Consensus 236 l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~ 315 (495)
T PRK14995 236 LGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIA 315 (495)
T ss_pred HHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 001000 0133444444333322222211 1 1112233332 34566778888888999999999999
Q ss_pred hhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHH
Q 011720 294 GYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVY 373 (479)
Q Consensus 294 g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 373 (479)
|++.|| +|||+....+..... +.... +.. .. .+ .+........++.|++.+...+...
T Consensus 316 g~l~~r--~g~~~~~~~g~~~~~-~~~~~----l~~---~~----------~~--~~~~~~~~~~~l~G~g~g~~~~~~~ 373 (495)
T PRK14995 316 GILVSR--LGLRLVATGGMALSA-LSFYG----LAM---TD----------FS--TQQWQAWGLMALLGFSAASALLAST 373 (495)
T ss_pred HHHHHH--cCchHHHHHHHHHHH-HHHHH----HHH---hc----------CC--CchHHHHHHHHHHHHhHHHHHHHHH
Confidence 999999 678775554433221 11111 111 01 01 1223334556677888877776666
Q ss_pred HHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 374 WVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 374 ~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
....+.. |+++++.+.+++++.+++|.+++..+.
T Consensus 374 ~~~~~~~-~~~~~g~~~~~~~~~~~lG~~~G~ai~ 407 (495)
T PRK14995 374 SAIMAAA-PPEKAAAAGAIETMAYELGAGLGIAIF 407 (495)
T ss_pred HHHHhcC-CHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 5666666 788899999999999999998886654
No 21
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.87 E-value=2.1e-20 Score=188.60 Aligned_cols=325 Identities=16% Similarity=0.130 Sum_probs=197.0
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...++......+++++.|+++||+|||+.+.++.+++.+...... .++|.+.++++|++.|++.+..++..
T Consensus 27 s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~~ 103 (399)
T TIGR00893 27 SAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA---FAGAYVSLYILRVLLGAAEAPFFPGI 103 (399)
T ss_pred ChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH---HHcCHHHHHHHHHHHHHHHHhhhhHH
Confidence 344556677788888899999999999999999999999887776333322 35689999999999999999999999
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccc-c
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVI-R 214 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~-r 214 (479)
..++.|+.|+++|++.++++.....+|..+|+.+...+... .+|+ .+.+..++.++..++..++.|+++.+ +
T Consensus 104 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (399)
T TIGR00893 104 ILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH------FSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAK 177 (399)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh------CCchHHHHHHHHHHHHHHHHhhheecCCCCccc
Confidence 99999999999999999999999999999999988765432 2343 23333333333333333333332211 1
Q ss_pred C-CCCccc----c---c--ccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhh---hhcccccccc--ccccchhhhHHH
Q 011720 215 D-DGTRCT----N---I--KYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFF---YSYQFNNVNG--LMFNLRTRGLNN 279 (479)
Q Consensus 215 ~-d~~~~~----~---~--~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~---~s~~~~~~~~--~~f~~~~~~l~~ 279 (479)
. ++++.+ . + +++..+++.+...+.+++|+++......+..... ....++.+.. .+++..+.++..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (399)
T TIGR00893 178 WLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMA 257 (399)
T ss_pred cCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHH
Confidence 0 000000 0 0 0000000111233445667665554433332221 1111133322 233445567777
Q ss_pred HHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHH
Q 011720 280 VFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYF 359 (479)
Q Consensus 280 ~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (479)
...+++.+++.++.|++.|| ++||+................... ..... +.. ..........+
T Consensus 258 ~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~---~~~~~~~~~~~ 320 (399)
T TIGR00893 258 SLPGIVGFIGMILGGRLSDL--LLRRGKSLVFARKTAIIAGLVLSL-LMFAT-----------NYV---NIPYAALALVA 320 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HhhcccchhHHHHHHHHHHHHHHH-HHHHh-----------ccc---hhHHHHHHHHH
Confidence 78889999999999999999 567752222111111111111100 00000 001 11122222222
Q ss_pred HHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 360 SYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 360 ~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
.+....+..+..+.+..|.. |+++|+++.++.+.+.++|..++..+..
T Consensus 321 -~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~g~~~~~~i~g 368 (399)
T TIGR00893 321 -LGFFGLGAGAIGWALISDNA-PGNIAGLTGGLINSLGNLGGIVGPIVIG 368 (399)
T ss_pred -HHHhchhhhhHHHHHHHhhc-ChhHHHHHHHHHHHHHHHhhhhhhHHhh
Confidence 33333336777888899999 8889999999999999999988877654
No 22
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.87 E-value=4.4e-20 Score=191.69 Aligned_cols=368 Identities=14% Similarity=0.057 Sum_probs=196.1
Q ss_pred CCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhh-ccCchhhHHHHHHHHhhhhhhhh
Q 011720 55 QLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYN-HHHDQTFAVVAGAVLGIGAGLLW 133 (479)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~-~~~~~~~li~~R~i~G~g~g~~~ 133 (479)
..++...+...+......++++++.|+++||+|||+.++++.+++.+......... .+.+.+.+++.|++.|++.|..+
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~ 138 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGW 138 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccc
Confidence 34455667777888888999999999999999999999999988776433322211 12467888999999999999888
Q ss_pred hhhhhhhhcCCCccchHhHHHHHHHHHHhhh-hhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCccc
Q 011720 134 AGQGAIMTSYPTATRKGTYISLFWSIFNMGG-VVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRV 212 (479)
Q Consensus 134 ~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~-~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~ 212 (479)
+.....+.|+.|+++||+.++++....++|. ..++.+...+... .+|++ .+++..++.++..++.+++.|+++.
T Consensus 139 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~----~gw~~-~f~i~~~~~~~~~~l~~~~~~~~~~ 213 (452)
T PRK11273 139 PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF----NDWHA-ALYMPAFAAILVALFAFAMMRDTPQ 213 (452)
T ss_pred hHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh----ccHHH-HHHHHHHHHHHHHHHHHHHccCCHh
Confidence 7777888899999999999999998888886 4555544333221 12333 3333333344433333444443321
Q ss_pred c--cCCCC--c----ccccccCCHHHHHHHHH--HHhhchHHHHHHHHHHHhhh-h--hhcccccccc--ccccchhhhH
Q 011720 213 I--RDDGT--R----CTNIKYSKVSTEAIEIL--KLFRNWKMLLLFPAAWASNF-F--YSYQFNNVNG--LMFNLRTRGL 277 (479)
Q Consensus 213 ~--r~d~~--~----~~~~~~~~~~~~~~~~~--~~~~~~r~ll~~~~~~~~~~-~--~s~~~~~~~~--~~f~~~~~~l 277 (479)
+ ++++. + .+.+.++..+.+.++.+ ..+++|++++.....+.... . ....++.+.. .+++..+.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~ 293 (452)
T PRK11273 214 SCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSW 293 (452)
T ss_pred hcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 1 00000 0 00000000000112211 23456666554433322221 1 1112244443 2355556666
Q ss_pred HHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHH
Q 011720 278 NNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVL 357 (479)
Q Consensus 278 ~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (479)
....+.++.+++.++.|++.||.+-+||...... .+........ .+.. . . . .........
T Consensus 294 ~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~--~~~l~~~~~~--~~~~-~--~-----------~--~~~~~~~~~ 353 (452)
T PRK11273 294 AYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVF--FMTLVTIATI--VYWL-N--P-----------A--GNPTVDMAC 353 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHH--HHHHHHHHHH--HHHH-h--c-----------c--cChHHHHHH
Confidence 6677888999999999999999422444321111 1110011110 0100 0 0 0 111111222
Q ss_pred HHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHH-HhhhcccCcchhHHHHHHHHHHHhhhhhhheee
Q 011720 358 YFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAV-AWQVDTHKVSLLSQLIINWSLTTVSYPLLVVLV 436 (479)
Q Consensus 358 ~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 436 (479)
.+..|............+..+.+ |++.|+++.|+.++...+|..+ +..+.........+....+.+..++++..+..+
T Consensus 354 ~~~~g~~~~~~~~~~~~~~~~~~-p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 354 MIVIGFLIYGPVMLIGLHALELA-PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHc-ChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 22333322222222344566888 7889999999998887776544 333332111111111112222222333344445
Q ss_pred eeEeccCCCCCC
Q 011720 437 MLAVKDDDKSKE 448 (479)
Q Consensus 437 ~~~~pet~~~~~ 448 (479)
++..+|+.++||
T Consensus 433 ~~~~~~~~~~~~ 444 (452)
T PRK11273 433 VVMIGEKRHHEE 444 (452)
T ss_pred HHhccccchHHH
Confidence 566678764444
No 23
>TIGR00898 2A0119 cation transport protein.
Probab=99.87 E-value=3.6e-20 Score=194.99 Aligned_cols=314 Identities=13% Similarity=0.044 Sum_probs=190.6
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
+...+...++.+.+..+++++.|+++||+|||+.++++.++..+.. .... .++|++.+++.|++.|++.+...+...
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~--~~~~-~~~~~~~~~~~r~l~G~~~~~~~~~~~ 202 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSG--VLTA-FSPNYTVFLVFRLLVGMGIGGIWVQAV 202 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHH--HHHH-HcccHHHHHHHHHHHHhhccchHHHHH
Confidence 4456677888889999999999999999999999999988777632 2222 468899999999999999999999999
Q ss_pred hhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCccc-----
Q 011720 138 AIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRV----- 212 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~----- 212 (479)
.++.|+.|+++|++..+++.....+|.++++.+++.+. +|+| .+++..+..++..+. .++.||++.
T Consensus 203 ~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-------~wr~-~~~~~~i~~~~~~~~-~~~~~esp~~l~~~ 273 (505)
T TIGR00898 203 VLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP-------DWRW-LQLAVSLPTFLFFLL-SWFVPESPRWLISQ 273 (505)
T ss_pred HHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-------HHHH-HHHHHHHHHHHHHHH-HHhcCCChHHHHHC
Confidence 99999999999999999999999999999998876542 1322 233333333333333 345565431
Q ss_pred ccCCCCcccc-------ccc-------CCHHHH---H---HHHHHHhhchHHHHHHHHHHHhhh--hhhcc-cccccccc
Q 011720 213 IRDDGTRCTN-------IKY-------SKVSTE---A---IEILKLFRNWKMLLLFPAAWASNF--FYSYQ-FNNVNGLM 269 (479)
Q Consensus 213 ~r~d~~~~~~-------~~~-------~~~~~~---~---~~~~~~~~~~r~ll~~~~~~~~~~--~~s~~-~~~~~~~~ 269 (479)
+|.++++... ..+ ....++ . ....+.+++|+++..........+ ...++ ...+.. .
T Consensus 274 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 352 (505)
T TIGR00898 274 GRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLG-N 352 (505)
T ss_pred CCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhcccc-c
Confidence 1111100000 000 000000 0 012233445544333222211111 01111 011111 0
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCC
Q 011720 270 FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGN 349 (479)
Q Consensus 270 f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (479)
+.. ...+.....++..+++.++.+++.|| +|||+....+.....+.. .+ +.. .+ . .
T Consensus 353 ~~~-~~~~~~~~~~~~~i~~~~~~~~l~dr--~grr~~~~~~~~~~~~~~-l~----~~~---~~-----------~--~ 408 (505)
T TIGR00898 353 LGG-NIYLDLFISGLVELPAKLITLLLIDR--LGRRYTMAASLLLAGVAL-LL----LLF---VP-----------V--D 408 (505)
T ss_pred cCC-ChHHHHHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHH-HH----HHH---cC-----------C--C
Confidence 111 12234455678888999999999999 789987665543322111 11 111 01 0 1
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 350 DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
.........++.+++.....+..+.+..|++ |.+.|+++.|+.+....+|..++..+..
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 409 LYFLRTALAVLGKFGITSAFQMVYLYTAELY-PTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 1122233334444555555566788889999 8899999999999999998888766543
No 24
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.86 E-value=1.5e-19 Score=185.59 Aligned_cols=313 Identities=11% Similarity=-0.007 Sum_probs=191.1
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHh--hhccCchhhHHHHHHHHhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLY--YNHHHDQTFAVVAGAVLGIGAGLLWA 134 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~--~~~~~~~~~li~~R~i~G~g~g~~~~ 134 (479)
++...+...+.......+++++.|+++||+|||+.+.++.++..+....... ...+++++.+++.|++.|++.+...+
T Consensus 50 s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 129 (417)
T PRK10489 50 STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVT 129 (417)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3445666677777888889999999999999999999887765542222111 11245678899999999999998888
Q ss_pred hhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCccccc
Q 011720 135 GQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVIR 214 (479)
Q Consensus 135 ~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~r 214 (479)
+...++.|+.|+++|++..++.....++|..+|+.++..+... .+++|. +.+..+..++..++ .+..|+.+.++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~----~~~~~~-~~~~~~~~~~~~~~-~~~l~~~~~~~ 203 (417)
T PRK10489 130 ALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA----GGVAWN-YGLAAAGTFITLLP-LLRLPALPPPP 203 (417)
T ss_pred HHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH----HhhHHH-HHHHHHHHHHHHHH-HHhCCCCCCCC
Confidence 8888899999999999999999999999999999988765321 123343 22222222232222 23334322111
Q ss_pred CCCCcccccccCCHHHHHHHHHH-HhhchHHHHHHHHHHHhhhh--hhcccccccc--ccccchhhhHHHHHHHHHHHHH
Q 011720 215 DDGTRCTNIKYSKVSTEAIEILK-LFRNWKMLLLFPAAWASNFF--YSYQFNNVNG--LMFNLRTRGLNNVFYWGAQMLG 289 (479)
Q Consensus 215 ~d~~~~~~~~~~~~~~~~~~~~~-~~~~~r~ll~~~~~~~~~~~--~s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~ 289 (479)
++ +++. .++.++.++ .+++|+++......+..... +...++.+.. .+.+....++.....+++.+++
T Consensus 204 ~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig 275 (417)
T PRK10489 204 QP-------REHP-LRSLLAGFRFLLASPVVGGIALLGGLLTMASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALG 275 (417)
T ss_pred cc-------cccc-hHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHH
Confidence 10 0111 122222222 33455443322221111111 1111133332 2345556677777888999999
Q ss_pred HHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHH
Q 011720 290 SVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQ 369 (479)
Q Consensus 290 ~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 369 (479)
.++.+++.|| .++++....+..... +.... +. . . ++........+++|++.+...
T Consensus 276 ~~~~~~l~~~--~~~~~~l~~~~~~~~-~~~~~----~~----~------------~--~~~~~~~~~~~~~g~~~~~~~ 330 (417)
T PRK10489 276 ALTSGWLAHS--ARPGLLMLLSTLGSF-LAVGL----FG----L------------M--PMWILAVLCLALFGYLSAISS 330 (417)
T ss_pred HHHHHHhhhc--cCcchHHHHHHHHHH-HHHHH----HH----c------------c--chHHHHHHHHHHHHHHHHHHH
Confidence 9999999887 334443333322211 11111 10 0 1 222334455666777777776
Q ss_pred HHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 370 SMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 370 ~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
+..+.++.+.. |++.|+++.|+++..+++|..++..+..
T Consensus 331 ~~~~~~~~~~~-p~~~~g~~~g~~~~~~~~g~~~g~~l~G 369 (417)
T PRK10489 331 LLQYTLLQTQT-PDEMLGRINGLWTAQNVTGDAIGAALLG 369 (417)
T ss_pred HHHHHHHHhhC-CHHHHHHHHHHHHHHHhhhHhHHHHHHH
Confidence 76667788888 7788999999999999988888877664
No 25
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.86 E-value=2.9e-19 Score=182.69 Aligned_cols=318 Identities=15% Similarity=0.128 Sum_probs=187.8
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhc-cCchhhHHHHHHHHhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNH-HHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~-~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
++...+...+.......+++++.|++.||+|||+.+..+.+++.+.......... .++.+.+++.|++.|+|.+...+.
T Consensus 46 s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~ 125 (402)
T TIGR00897 46 SPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYS 125 (402)
T ss_pred CHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhH
Confidence 4555666677778888999999999999999999999999887764333221112 357888899999999999887777
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhh-hhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccc
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGG-VVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVI 213 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~-~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~ 213 (479)
...++.+..|+++||+++|++....++|. ++|+.++..+.. ..+|. .++....+..+..++.+++.++++..
T Consensus 126 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (402)
T TIGR00897 126 FLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIP------AFGEMNTLWSALAFVLTGGVIALFSNKDIFTP 199 (402)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------ccchHHHHHHHHHHHHHHHHHHHhccCCCCCc
Confidence 67778898999999999999999999996 578877644321 12221 11111122222233333333322111
Q ss_pred cCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhh-h--hcccccccc-ccccchhhhHHHHHHHHHHHHH
Q 011720 214 RDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFF-Y--SYQFNNVNG-LMFNLRTRGLNNVFYWGAQMLG 289 (479)
Q Consensus 214 r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~-~--s~~~~~~~~-~~f~~~~~~l~~~~~~i~~~i~ 289 (479)
++.+ ++++..+..+...+.+++|++++.....+..... + ....+.+.. .+++..+.++.....+++.+++
T Consensus 200 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig 273 (402)
T TIGR00897 200 QHMQ------TREKFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVF 273 (402)
T ss_pred cccc------CCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHH
Confidence 1000 0011111112222345677766554433322221 1 111133332 2345555566666778899999
Q ss_pred HHHhhhhccccccCccceeee-hhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHH
Q 011720 290 SVGIGYVMDFSFQSLRTRGLV-GIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMF 368 (479)
Q Consensus 290 ~~~~g~l~Dr~~~gRr~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 368 (479)
++..|++.|| ++||+.... +...+.+....+. . . + .... ..........+++|++.+..
T Consensus 274 ~~~~g~l~dr--~~~~~~~~~~~~l~~~~~~~~l~---~-~----~--------~~~~--~~~~~~~~~~~~~G~~~~~~ 333 (402)
T TIGR00897 274 NVIFGIVGDK--LGWMNTVRWFGGVGCGIFTLALY---Y-I----P--------QHFG--HSFAVALIIAIALGIFLAGY 333 (402)
T ss_pred HHHHHHHHHh--hcchhHHHHHHHHHHHHHHHHHH---H-H----H--------HccC--CcHHHHHHHHHHHHHHHHHH
Confidence 9999999999 667765431 1111111111111 0 0 0 0011 12333445566677777766
Q ss_pred HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 369 QSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 369 ~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
.+ ......+.. +++|+++.|+.+....++..++..+..
T Consensus 334 ~~-~~~~~~~~~--~~~~g~~~g~~~~~~~lg~~~gp~i~g 371 (402)
T TIGR00897 334 VP-LAAVFPTLA--PKHKGAAMSVLNLSAGLSAFLAPAIAV 371 (402)
T ss_pred HH-HHHHHHhhC--cchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55 344556655 568999999999999998888766553
No 26
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.86 E-value=1.9e-19 Score=183.63 Aligned_cols=340 Identities=11% Similarity=-0.003 Sum_probs=194.0
Q ss_pred ccccccchhHHHHHHHHHHhhhhhhhhhh-hc-CCCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhh
Q 011720 19 SLFRYNSPLVQVSLIGLVCFCCPGMFNAL-SG-MGGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGC 96 (479)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-~~-l~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~ 96 (479)
+...++++...+.+..++.++..++.... .. +..+...++...+...++.+....+++++.|.++||+|||+++.++.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~ 88 (399)
T PRK05122 9 SGLRLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGL 88 (399)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHH
Confidence 33445555555555555554443332221 11 11222234556777788888999999999999999999999999998
Q ss_pred HHHHHHHHHHHhhhcc-----CchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHH
Q 011720 97 STYVLYAGSFLYYNHH-----HDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIP 171 (479)
Q Consensus 97 ~~~~i~~~~~~~~~~~-----~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 171 (479)
+++.+........... .+.+++++.|+++|++.+...++...++.|..|+++|++.++++.....+|.++|+.++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 168 (399)
T PRK05122 89 CGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLG 168 (399)
T ss_pred HHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHH
Confidence 8776533332221111 24567899999999999999888888889999999999999999999999999999887
Q ss_pred hhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccC-CcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHH
Q 011720 172 FIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILP-PSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPA 250 (479)
Q Consensus 172 ~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~-~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~ 250 (479)
..+.. ..+|+....... .+..+..++.++ |+.. +++ +++.+.++.++..++ ......+. .
T Consensus 169 ~~l~~------~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~---~~~~~~~~-~ 229 (399)
T PRK05122 169 VLLYH------WGGLAGLGLLIM--LLALLGLLLARPRPAVP-PVK------GERLPFRRVLGRVWP---YGMGLALA-S 229 (399)
T ss_pred HHHHH------cccHHHHHHHHH--HHHHHHHHHHhcCCCCC-CCC------ccchhHHHHHHHHHH---HHHHHHHH-H
Confidence 65532 134543221111 111111122221 2111 000 011122222221111 11111111 0
Q ss_pred HHHhhhhhhccccccc-cccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhh
Q 011720 251 AWASNFFYSYQFNNVN-GLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLAS 329 (479)
Q Consensus 251 ~~~~~~~~s~~~~~~~-~~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~ 329 (479)
..+.. ...+. +.+. ..++ .+.++....++++.+++.++.+++.|| ++||+....+...+. +.... ...
T Consensus 230 ~~~~~-~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r--~~~~~~~~~~~~~~~-~~~~~----~~~ 298 (399)
T PRK05122 230 IGFGT-IATFI-TLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINR--LGGLRVAIVSLLVEI-LGLLL----LWL 298 (399)
T ss_pred HHHHH-HHHHH-HHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHH-HHHHH----HHH
Confidence 00100 01111 1111 1112 233444556788888999999999999 567775544432221 11111 100
Q ss_pred hcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhh
Q 011720 330 QLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQV 407 (479)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~ 407 (479)
. ++........++.|++.+...+.......+.. |+++|+++.++++....+|..++..+
T Consensus 299 ----~--------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~ 357 (399)
T PRK05122 299 ----A--------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRV-PPQNRGAALGAYSVFLDLSLGITGPL 357 (399)
T ss_pred ----h--------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 11223344456677777766665555666777 78899999999999888887766444
No 27
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.86 E-value=6.5e-20 Score=182.82 Aligned_cols=316 Identities=19% Similarity=0.225 Sum_probs=194.8
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...+...++......++.++.|+++||+|||+.+.++.++..+. ..+.. .++|.+.++++|++.|++.+..+++
T Consensus 29 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~ 105 (352)
T PF07690_consen 29 LSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG--SLLLA-FASNFWLLLIARFLLGIGSGFFSPA 105 (352)
T ss_dssp TTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH--HHHHH-HHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH--HHHhh-hhhhHHHHhhhcccccccccccccc
Confidence 34555666777888888999999999999999999999999988774 12221 2367889999999999999999999
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
...++.|+.|+++|++.+++.....++|.++|+.++..+... .+|++ .+++..++.++..++..++.++++.+++
T Consensus 106 ~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~----~~~~~-~~~~~~~~~~~~~il~~~~~~~~~~~~~ 180 (352)
T PF07690_consen 106 SNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY----FGWRW-AFLISAILSLIAAILFILFLPEPPPPRE 180 (352)
T ss_dssp HHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH----CHHCC-HHHHHHHHHHHHHHHHHCCC---STTTT
T ss_pred ccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc----ccccc-ccccccchhhhhhhhHhhhhhhcccccc
Confidence 999999999999999999999999999999999998866421 12333 3444444455444433333332221111
Q ss_pred CCCcccccccCCHHHHHHHHHHHh-hchHHHHHHHHHHHhh--h-hhhcccccccc--cccc-chhhhHHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLF-RNWKMLLLFPAAWASN--F-FYSYQFNNVNG--LMFN-LRTRGLNNVFYWGAQML 288 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~-~~~r~ll~~~~~~~~~--~-~~s~~~~~~~~--~~f~-~~~~~l~~~~~~i~~~i 288 (479)
+.++.+. ++..++++++.++.. ++|.++......+... + ......+.+.. .+++ ..+.+......++..++
T Consensus 181 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (352)
T PF07690_consen 181 RESPKES--ESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGII 258 (352)
T ss_dssp --SSTTT--T--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHH
T ss_pred ccccccc--ccccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 1111000 000111112212222 2332321111111111 1 11111133322 2344 44556666777888888
Q ss_pred HHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHH
Q 011720 289 GSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMF 368 (479)
Q Consensus 289 ~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 368 (479)
+.++.+++.|| +++|+........+.+.. .. +.. . ... .+........++.|++.+..
T Consensus 259 ~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~-~~----~~~----~--------~~~---~~~~~~~~~~~~~g~~~~~~ 316 (352)
T PF07690_consen 259 GSLLAGRLSDR--FGRRRRLLIAILLLILGA-LG----LLL----L--------PFS---SSPVWLIIALFLIGFGFGIV 316 (352)
T ss_dssp HHHHHHHHHHH--TTCHHHHHHHHHHHHHHH-HH----HCC----S--------HHH---CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--cCcHHHHHHHHHHHHHHH-HH----HHH----H--------HHh---hhHHHHHHHHHHHHHHHHHH
Confidence 89999999999 566665544433321111 11 110 0 001 12233444666788888888
Q ss_pred HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHH
Q 011720 369 QSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVA 404 (479)
Q Consensus 369 ~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~ 404 (479)
++....+..+.. |+++|+++.++.+..++++..++
T Consensus 317 ~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~~~~ig 351 (352)
T PF07690_consen 317 FPILFSLIQELV-PPEYRGTAFGLFNSIGSLGGIIG 351 (352)
T ss_dssp CHHHHHHHHCCC-HTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHC
Confidence 888888888988 77899999999999999888765
No 28
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.86 E-value=7.1e-19 Score=177.94 Aligned_cols=312 Identities=14% Similarity=0.045 Sum_probs=194.0
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+....+..+++++.|++.||+|||+.+.++.++..+.... .. .+++.+.+++.|++.|++.+...+..
T Consensus 38 s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~l~g~~~~~~~~~~ 114 (385)
T TIGR00710 38 PASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLG--LA-LSNNIETLLVLRFVQAFGASAGSVIS 114 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHH--HH-HHccHHHHHHHHHHHHcchhHHHHHH
Confidence 4555667777888888999999999999999999999998877663332 22 35788999999999999999999999
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
..++.|+.|+++|++.+++......+|..+|+.+...+..+ .+|+ .+++..++..+..++..+..||++.+++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (385)
T TIGR00710 115 QALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW------LSWHAIFAFLSLAGILLSALIFFILPETLPYEA 188 (385)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 99999999999999999999999999999999887765421 3454 2333333333333333344444321111
Q ss_pred CCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhh-hhhh--cccccccc--ccccchhhhHHHHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASN-FFYS--YQFNNVNG--LMFNLRTRGLNNVFYWGAQMLGS 290 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~-~~~s--~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~~ 290 (479)
++..++..++..+.+++|+++.......... ..+. ...+.+.. .+++..+.++.....+++.+++.
T Consensus 189 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 259 (385)
T TIGR00710 189 ---------RIQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGG 259 (385)
T ss_pred ---------cCCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 0111122233334456666554332221111 1111 11122221 23455566777777889999999
Q ss_pred HHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHH
Q 011720 291 VGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQS 370 (479)
Q Consensus 291 ~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (479)
++.+++.|| ++||+....+...+.+...... ... .. .. ..........++.|++.+...+
T Consensus 260 ~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~----------~~--~~~~~~~~~~~~~g~~~~~~~~ 319 (385)
T TIGR00710 260 FLNGRFIKK--WGAKSLLRMGLILFAVSAVLLE-----ITA-IL----------GL--GSWAMIIGPMMFVGIGNSMISS 319 (385)
T ss_pred HHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHH-----HHH-Hh----------cc--chHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 6788766655433221111111 000 00 11 1223334455667777776666
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHH-HHHHHhhhc
Q 011720 371 MVYWVIGALADDSETLSRYTGFYKGVQSA-GAAVAWQVD 408 (479)
Q Consensus 371 ~~~~~~~~i~~~~~~r~~~~~~~~~~~~~-g~~i~~~~~ 408 (479)
.......+.. +++++++.++.+..+.. +...+..+.
T Consensus 320 ~~~~~~~~~~--~~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 320 IAMAYALEDF--PHVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHhccC--cccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 5655555655 46788999988877754 333333333
No 29
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.85 E-value=1.2e-19 Score=190.49 Aligned_cols=117 Identities=15% Similarity=0.165 Sum_probs=98.8
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...+...+..+.+..+++++.|+++||+|||+.+.++.++..+. ..... .++|++.++++|++.|++.+...+.
T Consensus 52 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~--~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~ 128 (496)
T PRK03893 52 LTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVG--TLACG-FAPGYWTLFIARLVIGMGMAGEYGS 128 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH--HHHHH-HHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666777788888899999999999999999999998877663 22222 3568999999999999999998888
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
...++.|+.|+++|++.++++.....+|..+|+.+...+.
T Consensus 129 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 168 (496)
T PRK03893 129 SATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV 168 (496)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999999999999998877553
No 30
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.85 E-value=2e-19 Score=180.69 Aligned_cols=312 Identities=12% Similarity=0.020 Sum_probs=187.6
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...++.+.+..+++++.|+++||+|||+++.++.++..+.. .... .++|.+.++++|++.|++.+..++..
T Consensus 36 s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~ 112 (377)
T TIGR00890 36 GVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGF--TFYA-IADSLAALYLTYGLASAGVGIAYGIA 112 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHH--HHHH-HHHHHHHHHHHHHHHhHHHHHHHHhH
Confidence 45567777888899999999999999999999999999998877633 3322 35789999999999999999887777
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
..++.|+.| ++||++.+++.....+|..+++.+...+.. ..+|+ .+++..++.++..++.+++.++++.+++
T Consensus 113 ~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (377)
T TIGR00890 113 LNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN------LEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLI 185 (377)
T ss_pred HHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh------cccHHHHHHHHHHHHHHHHHHHHHheecCchhcc
Confidence 777778765 689999999999998888765544333321 13454 2333333333333333333322111110
Q ss_pred CCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhh---hccccccc-cccccchhhhHHHHHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFY---SYQFNNVN-GLMFNLRTRGLNNVFYWGAQMLGSV 291 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~---s~~~~~~~-~~~f~~~~~~l~~~~~~i~~~i~~~ 291 (479)
+ ++. +.+. +.++..+.+++|+.++.....+...... ...+..+. ..+.+..+.++.....+++.+++.+
T Consensus 186 ~-~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (377)
T TIGR00890 186 K-TNI---EVSV---KDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRP 258 (377)
T ss_pred c-cCc---ccch---hhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 0000 1112234455665544433322222111 11112221 1223444556667778899999999
Q ss_pred HhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHH
Q 011720 292 GIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSM 371 (479)
Q Consensus 292 ~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 371 (479)
+.|++.|| +|||+....+..... +.... .. +.+ + ..........+..++..+...+.
T Consensus 259 ~~g~l~dr--~g~~~~~~~~~~~~~-~~~~~----~~----~~~-------~-----~~~~~~~~~~~~~g~~~g~~~~~ 315 (377)
T TIGR00890 259 FLGALSDK--IGRQKTMSIVFGISA-VGMAA----ML----FIP-------M-----LNDVLFLATVALVFFTWGGTISL 315 (377)
T ss_pred HHHHHHHH--HhhhhhhhHHHHHHH-HHHHH----HH----Hcc-------c-----chhHHHHHHHHHHHHHhccchhc
Confidence 99999999 678876555443321 11111 10 010 0 11111222233444444444554
Q ss_pred HHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 372 VYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 372 ~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
...+..|.+ |+++|+++.++.+....+|..++..+..
T Consensus 316 ~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~~~~g 352 (377)
T TIGR00890 316 FPSLVSDIF-GPANSAANYGFLYTAKAVAGIFGGLIAS 352 (377)
T ss_pred cHHHHHHHh-hhhhhhhHhHHHHHHHHHHHHHHHHHHH
Confidence 556788888 7889999999999999998888876553
No 31
>PRK09952 shikimate transporter; Provisional
Probab=99.85 E-value=2e-19 Score=185.99 Aligned_cols=309 Identities=13% Similarity=0.027 Sum_probs=171.0
Q ss_pred HHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchh--------hHHHHHHHHhhhhhhhhhhhh
Q 011720 66 TALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQT--------FAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 66 ~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~--------~li~~R~i~G~g~g~~~~~~~ 137 (479)
++.+.+..+++++.|+++||+|||+++.++.+++.+..... . .+++++ .+++.|+++|++.|..+++..
T Consensus 71 ~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~ 147 (438)
T PRK09952 71 GVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALI--G-LLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAA 147 (438)
T ss_pred HHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH--h-cCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHH
Confidence 34556677889999999999999999999999888743332 2 356665 588999999999999999889
Q ss_pred hhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCC--cccccchhHHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 138 AIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTD--AESVNDKTYIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~--~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
.++.|+.|+++||+..+.......+|.+++..+...+.....+ ...++|+.......+..+..+......||++..++
T Consensus 148 ~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~ 227 (438)
T PRK09952 148 LLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQ 227 (438)
T ss_pred HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHH
Confidence 9999999999999999999999999998887665544321100 01356764322222211111111111233321100
Q ss_pred CCCcc-cccccCCHHHHHHHHHHHhhchHHHHHHHH-HHHhhh-hh---hccccccccc--cccchhhhHHHHHHHHHHH
Q 011720 216 DGTRC-TNIKYSKVSTEAIEILKLFRNWKMLLLFPA-AWASNF-FY---SYQFNNVNGL--MFNLRTRGLNNVFYWGAQM 287 (479)
Q Consensus 216 d~~~~-~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~-~~~~~~-~~---s~~~~~~~~~--~f~~~~~~l~~~~~~i~~~ 287 (479)
+..+. +.+++.+.. + ..+++|+.+..... .+...+ .+ ++. +.+... +++...........++..+
T Consensus 228 ~~~~~~~~~~~~~~~---~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~~~~g~s~~~~~~~~~~~g~~~~ 300 (438)
T PRK09952 228 QQHEQAAAKKRIPVI---E---ALLRHPGAFLKIIALRLCELLTMYIVTAFA-LNYSTQNLGLPRELFLNIGLLVGGLSC 300 (438)
T ss_pred HHhhcccccccCCHH---H---HHHHchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 00000 000011111 1 12234444333221 111111 11 121 222221 2232222233445577778
Q ss_pred HHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHH
Q 011720 288 LGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAM 367 (479)
Q Consensus 288 i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 367 (479)
++.++.|++.|| +|||+....+..... +...... ... . .. .......+..++.++..+.
T Consensus 301 i~~~~~g~l~Dr--~grr~~~~~~~~~~~-~~~~~~~--~~~----~----------~~--~~~~~~~~~~~l~~~~~~~ 359 (438)
T PRK09952 301 LTIPCFAWLADR--FGRRRVYITGALIGT-LSAFPFF--MAL----E----------AQ--SIFWIVFFSIMLANIAHDM 359 (438)
T ss_pred HHHHHHHHHHHH--hCchHHHHHHHHHHH-HHHHHHH--HHH----H----------cC--ChHHHHHHHHHHHHHHHHH
Confidence 888899999999 778876555433221 1111110 100 0 01 1122223334445666666
Q ss_pred HHHHHHHHHHHhcCCchhhhHHHHHHHHH-HHHHHHHHhh
Q 011720 368 FQSMVYWVIGALADDSETLSRYTGFYKGV-QSAGAAVAWQ 406 (479)
Q Consensus 368 ~~~~~~~~~~~i~~~~~~r~~~~~~~~~~-~~~g~~i~~~ 406 (479)
..+..+.+++|.+ |.+.|+.+.++.... ..++..++..
T Consensus 360 ~~~~~~~~~~e~~-p~~~r~tg~g~~~~~~~~lgg~~~p~ 398 (438)
T PRK09952 360 VVCVQQPMFTEMF-GASYRYSGAGVGYQVASVVGGGFTPF 398 (438)
T ss_pred HHHHHHHHHHHHC-CcchhHHHHhHHHHHHHHHHHHHHHH
Confidence 6666778899999 778888887775433 3355544433
No 32
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.85 E-value=5.4e-19 Score=184.82 Aligned_cols=322 Identities=13% Similarity=0.038 Sum_probs=201.5
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+....+..++.++.|+++||+|||+.++++.+++.+. ...+. .++|.+.++++|+++|++.+...+..
T Consensus 35 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~--~~~~~-~~~~~~~l~~~~~~~G~~~~~~~~~~ 111 (485)
T TIGR00711 35 SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG--SLLCG-VAPNLELMIIFRVIQGFGGGPLIPLS 111 (485)
T ss_pred ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH--HHHHh-CcCCHHHHHHHHHHHHhhhhhHHHHH
Confidence 3445556677788888899999999999999999999999988773 33333 46889999999999999999999999
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCcccccCC
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVIRDD 216 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~r~d 216 (479)
..++.|+.|+++||+.++++.....+|..+|+.++..+..+ .+|+|. +++...+.++..++..++.|+++..+++
T Consensus 112 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~----~~w~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (485)
T TIGR00711 112 FSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN----YHWRWI-FLINVPIGIIVVVVAFFILPRDKPAASE 186 (485)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC----cCceeh-hhhhhHHHHHHHHHHHHHcCCccccccC
Confidence 99999999999999999999999999999999987765321 234443 3333333333333334444433211111
Q ss_pred CCc-c----------------cccccCCHH---------------------HHHH-----HHHHHhhchHHHHHHHHHHH
Q 011720 217 GTR-C----------------TNIKYSKVS---------------------TEAI-----EILKLFRNWKMLLLFPAAWA 253 (479)
Q Consensus 217 ~~~-~----------------~~~~~~~~~---------------------~~~~-----~~~~~~~~~r~ll~~~~~~~ 253 (479)
+.+ . ...++..+. ++.+ ...+.+++|++.......+.
T Consensus 187 ~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (485)
T TIGR00711 187 NFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSL 266 (485)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHH
Confidence 000 0 000000000 0000 01123445544443322222
Q ss_pred hhhh---hhcccccccc--ccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhh
Q 011720 254 SNFF---YSYQFNNVNG--LMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLA 328 (479)
Q Consensus 254 ~~~~---~s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~ 328 (479)
.++. ..+.++.+.. .+++..+.++.....+++.++++++.|++.|| +|||+....+...+. +.... +.
T Consensus 267 ~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r--~~~~~~~~~g~~~~~-~~~~~----~~ 339 (485)
T TIGR00711 267 LGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK--IDPRKLVTIGLILYA-VGFYW----RA 339 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCcHHHHHHHHHHHH-HHHHH----Hh
Confidence 2211 1111233332 24466677888888899999999999999999 678876555543321 11111 10
Q ss_pred hhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 329 SQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
. ... .+ ..........++.|++.+...+.......+.. |+++++++.++++..+.+|.+++..+.
T Consensus 340 ~--~~~----------~~--~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~g~~ig~~i~ 404 (485)
T TIGR00711 340 F--TFT----------PD--TPFLAIALPQFIRGFGMGCFFMPLTTIALSGL-PPHKIARGSSLSNFTRQLGGSIGTALI 404 (485)
T ss_pred c--cCC----------CC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 011 01 22233344456677777666654555555666 788999999999999999999887655
No 33
>PRK12382 putative transporter; Provisional
Probab=99.85 E-value=1e-18 Score=177.86 Aligned_cols=307 Identities=12% Similarity=0.011 Sum_probs=184.5
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhh-----ccCchhhHHHHHHHHhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYN-----HHHDQTFAVVAGAVLGIGAG 130 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~-----~~~~~~~li~~R~i~G~g~g 130 (479)
.++...+...+..+....+++++.|+++||+|||+.+.++.+...+......... ..++.+.++++|+++|++.+
T Consensus 48 ~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 127 (392)
T PRK12382 48 FGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGES 127 (392)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHH
Confidence 4566677788888899999999999999999999999999876655322221110 12467889999999999999
Q ss_pred hhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCc
Q 011720 131 LLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPS 210 (479)
Q Consensus 131 ~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~ 210 (479)
...++..+++.|..|+++|+++++++......|..+|+.++..+.. ..+|+.... ...++..+...+.++.+
T Consensus 128 ~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~------~~g~~~~~~--~~~~~~~~~~~~~~~~~ 199 (392)
T PRK12382 128 QLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHS------HFGFAALAL--TTMVLPLLAWAFNGTVR 199 (392)
T ss_pred HHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHh------ccChHHHHH--HHHHHHHHHHHHHHhcc
Confidence 9888888888999999999999999999999999999988765532 134542211 11111111112222111
Q ss_pred ccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccccccccccccchhhhHHHHHHHHHHHHHH
Q 011720 211 RVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFYSYQFNNVNGLMFNLRTRGLNNVFYWGAQMLGS 290 (479)
Q Consensus 211 ~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~s~~~~~~~~~~f~~~~~~l~~~~~~i~~~i~~ 290 (479)
+.++++ +++++. ++..+.+.++++........... ...+. +.+... .+....++....++++.+++.
T Consensus 200 ~~~~~~------~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~-~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 266 (392)
T PRK12382 200 KVPAHA------GERPSL----WSVVGLIWKPGLGLALQGVGFAV-IGTFV-SLYFAS-KGWAMAGFTLTAFGGAFVLMR 266 (392)
T ss_pred CCCCCc------ccCchH----HHHHHHHHHhHHHHHHHHHHHhH-HHHHH-HHHHHh-cCCchhHHHHHHHHHHHHHHH
Confidence 100000 011122 22222222233222111110100 01111 111110 111233444556777888899
Q ss_pred HHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHH
Q 011720 291 VGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQS 370 (479)
Q Consensus 291 ~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (479)
++.|++.|| +|||+....+..... +.... ... . ++........++.|+..+...+
T Consensus 267 ~~~g~l~~r--~g~~~~~~~~~~~~~-~~~~~----~~~----~--------------~~~~~~~~~~~l~g~~~~~~~~ 321 (392)
T PRK12382 267 VLFGWMPDR--FGGVKVAIVSLLVET-VGLLL----LWL----A--------------PTAWVALAGAALTGAGCSLIFP 321 (392)
T ss_pred HHHHHHHHh--cCCCeehHHHHHHHH-HHHHH----HHH----c--------------ccHHHHHHHHHHHHHHHHhHHH
Confidence 999999999 678876555543321 11111 100 0 1122334455566777666666
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 371 MVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 371 ~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
.......+.. ++++|+++.++++....+|.+++..+..
T Consensus 322 ~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~ig~~~~g 359 (392)
T PRK12382 322 ALGVEVVKRV-PSQVRGTALGGYAAFQDIAYGVSGPLAG 359 (392)
T ss_pred HHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666677888 7889999999999999888888766553
No 34
>TIGR00895 2A0115 benzoate transport.
Probab=99.84 E-value=5.2e-19 Score=179.23 Aligned_cols=316 Identities=15% Similarity=0.115 Sum_probs=191.2
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+....+..+++++.|+++||+|||+.+.++.++..+.... .. .+++.+.+++.|++.|++.+...+..
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~g~~~~~~~~~~ 126 (398)
T TIGR00895 50 DPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLL--CA-LATNVTQLLILRFLAGLGLGGLMPNL 126 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHH--HH-HccchHHHHHHHHHHhcccccchhhH
Confidence 4455566667777778889999999999999999999998876663222 22 35788999999999999999999999
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCccc--c
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRV--I 213 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~--~ 213 (479)
.+++.|+.|+++|++.++++.....+|..+|+.+...+... .+|+ .+.+..++..+..++..++.|+++. .
T Consensus 127 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (398)
T TIGR00895 127 NALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV------FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLV 200 (398)
T ss_pred HHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc------ccceeehhhhhhHHHHHHHHHHHhCCCCChHHH
Confidence 99999999999999999999999999999999887655321 2333 2322222333333333333443221 1
Q ss_pred cCCCCc-----------------ccccccCCHHHHHHHHHHHhh----chHHHHHHHHHHHhhhhh---hccccccc-cc
Q 011720 214 RDDGTR-----------------CTNIKYSKVSTEAIEILKLFR----NWKMLLLFPAAWASNFFY---SYQFNNVN-GL 268 (479)
Q Consensus 214 r~d~~~-----------------~~~~~~~~~~~~~~~~~~~~~----~~r~ll~~~~~~~~~~~~---s~~~~~~~-~~ 268 (479)
++++++ .+.++.+...++.++.++.++ .++.+............+ ....+.+. ..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (398)
T TIGR00895 201 SKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVEL 280 (398)
T ss_pred hcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 110000 000000000111122222222 122222221111111111 11112111 12
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCC
Q 011720 269 MFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSG 348 (479)
Q Consensus 269 ~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (479)
+++....++......++.+++.++.+++.|| ++||+. ..+.....++...+ . . . .
T Consensus 281 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~-~~~~~~~~~~~~~~----~-~-~--~-------------- 335 (398)
T TIGR00895 281 GFSLSLAATGGALFNFGGVIGSIIFGWLADR--LGPRVT-ALLLLLGAVFAVLV----G-S-T--L-------------- 335 (398)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cchHHH-HHHHHHHHHHHHHH----H-H-H--h--------------
Confidence 3455556777778889999999999999999 677732 22221111111111 0 0 0 0
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhh
Q 011720 349 NDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQV 407 (479)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~ 407 (479)
.+........++.|++.+..++..+.++.+.+ |+++|+++.|+......+|.+++..+
T Consensus 336 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~g~~~ 393 (398)
T TIGR00895 336 FSPTLLLLLGAIAGFFVNGGQSGLYALMALFY-PTAIRATGVGWAIGIGRLGAIIGPIL 393 (398)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11123345556778888888887888899999 88999999999999888888877554
No 35
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.84 E-value=2.5e-19 Score=184.88 Aligned_cols=297 Identities=15% Similarity=0.103 Sum_probs=166.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCch--------hhHHHHHHHHhhhhhhhhhh
Q 011720 64 ANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQ--------TFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 64 ~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~--------~~li~~R~i~G~g~g~~~~~ 135 (479)
..+..+.+..+++++.|+++||+|||+++.++.+.+.+.+.... .++++ ..+++.|+++|+|.|..++.
T Consensus 68 ~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~ 144 (432)
T PRK10406 68 VFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIA---CLPGYETIGTWAPALLLLARLFQGLSVGGEYGT 144 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHh---hcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhh
Confidence 34556666779999999999999999999999999887444332 23444 36899999999999999999
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCC--cccccchh-HHHHHHHHHHHHHHHHhccCCccc
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTD--AESVNDKT-YIAFMCFMSAGAALSLAILPPSRV 212 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~--~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~~ 212 (479)
..++++|+.|+++||+..++.......|..+++++...+.....+ ...++||. |.+..++.++.. ......||++.
T Consensus 145 ~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~~ 223 (432)
T PRK10406 145 SATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETSQ 223 (432)
T ss_pred HHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCch
Confidence 999999999999999999999888888888888765544321100 01356764 322222222211 11112233221
Q ss_pred ccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHH-Hhhh-hh---hcccccccc--ccccchhhhHHHHHHHHH
Q 011720 213 IRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAW-ASNF-FY---SYQFNNVNG--LMFNLRTRGLNNVFYWGA 285 (479)
Q Consensus 213 ~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~-~~~~-~~---s~~~~~~~~--~~f~~~~~~l~~~~~~i~ 285 (479)
.++ + ++++ ..++++ .+++|+.++...... ..+. ++ .+. +++.. .+++..+.++......+.
T Consensus 224 ~~~-~-----~~~~--~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~l-p~~l~~~~g~s~~~~~~~~~i~~~~ 291 (432)
T PRK10406 224 QET-R-----ALKE--AGSLKG---LWRNRRAFIMVLGFTAAGSLCFYTFTTYM-QKYLVNTAGMHANVASGIMTAALFV 291 (432)
T ss_pred HHH-h-----hhcc--cccHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 100 0 0000 011232 234455443322212 1111 11 222 44332 234444555555555666
Q ss_pred HHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhH
Q 011720 286 QMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLD 365 (479)
Q Consensus 286 ~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 365 (479)
..++.++.|++.|| ++||+....+.....+...... ... .. .+ ... ....+.....+..
T Consensus 292 ~~i~~~~~G~l~Dr--~grr~~~~~~~~~~~~~~~~~~---~~~----~~---------~~--~~~-~~~~~~~~~~~~~ 350 (432)
T PRK10406 292 FMLIQPLIGALSDK--IGRRTSMLCFGSLAALFTVPIL---SAL----QN---------VS--SPY-AAFGLVMCALLIV 350 (432)
T ss_pred HHHHHHHHHHHHHH--cCchHHHHHHHHHHHHHHHHHH---HHH----Hc---------CC--cHH-HHHHHHHHHHHHH
Confidence 67778888999999 6788755443222111110010 000 00 00 111 1111111122222
Q ss_pred HHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHH
Q 011720 366 AMFQSMVYWVIGALADDSETLSRYTGFYKGVQS 398 (479)
Q Consensus 366 ~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~ 398 (479)
+...+..+.+.+|.+ |++.|+++.|+.+...+
T Consensus 351 ~~~~~~~~~~~~e~f-p~~~r~t~~g~~~~~g~ 382 (432)
T PRK10406 351 SFYTSISGILKAEMF-PAQVRALGVGLSYAVAN 382 (432)
T ss_pred HHHHHHHHHHHHHHC-CCCccchhhhHHHHHHH
Confidence 233344566788999 88999999998876544
No 36
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.84 E-value=2.7e-19 Score=185.87 Aligned_cols=319 Identities=11% Similarity=0.087 Sum_probs=190.3
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHH-HHHHHhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVV-AGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~-~R~i~G~g~g~~~~~~ 136 (479)
....+...+..+....++.++.|+++||+|||+.++++.+++.+.. ..+. .+++.+.+++ .|++.|++.+..++..
T Consensus 53 ~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~--~~~~-~~~~~~~l~~~~~~l~G~~~~~~~~~~ 129 (455)
T TIGR00892 53 YSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGM--ILAS-FSSNVIELYLTAGFITGLGLAFNFQPS 129 (455)
T ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHH--HHHH-HhhhHHHHHHHHHHHHHhcchhhhhHH
Confidence 4445556667777778888999999999999999999988776632 2222 3567887765 5799999999876666
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCccc---
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRV--- 212 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~--- 212 (479)
..++.++. +++|++++++......+|..+++.+...+... ++|+ .|++..++.++..+..++++++.+.
T Consensus 130 ~~~~~~~~-~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~------~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~ 202 (455)
T TIGR00892 130 LTMLGKYF-YRRRPLANGLAMAGSPVFLSTLAPLNQYLFES------FGWRGSFLILGGLLLHCCVCGALMRPVGPSQRV 202 (455)
T ss_pred HHHHHHHH-HhhHHHHHHHHHhcccHHHHHHHHHHHHHHHH------hChHHHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 67777877 58999999999999999998888876655321 3453 3334344444333333444442211
Q ss_pred ccC---CCCccc-ccc---cCCHHHHHHHH--HHHhhchHHHHHHHHHHHhhhh----hhccccccc-cccccchhhhHH
Q 011720 213 IRD---DGTRCT-NIK---YSKVSTEAIEI--LKLFRNWKMLLLFPAAWASNFF----YSYQFNNVN-GLMFNLRTRGLN 278 (479)
Q Consensus 213 ~r~---d~~~~~-~~~---~~~~~~~~~~~--~~~~~~~r~ll~~~~~~~~~~~----~s~~~~~~~-~~~f~~~~~~l~ 278 (479)
.+. ++.+.. ..+ ++...++.++. ++.+++|+++......+..++. +.+. +.+. ..+++....++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l-~~~~~~~g~s~~~~g~~ 281 (455)
T TIGR00892 203 SKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFL-VPYAKDKGVDEYEAAFL 281 (455)
T ss_pred ccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHH-HHHHHHcCCCHHHHHHH
Confidence 000 000000 000 00111111211 2455666665544433322221 1111 2222 123455566777
Q ss_pred HHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHH
Q 011720 279 NVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLY 358 (479)
Q Consensus 279 ~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (479)
....+++.+++.++.|++.||++.++|+....+.... ....... . . . . . .+.....+..
T Consensus 282 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~-~~~l~~l---l-~-~-~-----------~---~~~~~~~i~~ 340 (455)
T TIGR00892 282 LSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALL-FNGLTHL---L-C-A-L-----------A---GDYTGLVIYC 340 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHH-HHHHHHH---H-H-H-H-----------h---chHHHHHHHH
Confidence 7778899999999999999985333343333222111 1111110 0 0 0 0 0 1223344556
Q ss_pred HHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 359 FSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 359 ~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
++.|+..+...+..+.++.+.. ++++++++.++++..+++|..++..+..
T Consensus 341 ~~~G~~~g~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~igp~i~G 390 (455)
T TIGR00892 341 IFFGLSFGSVGALLFEVLMDLV-GAQRFSSAVGLVTIVECCAVLIGPPLAG 390 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHh-hHHHHhhHHhHHHHHHHHHHHcccccee
Confidence 6677777777777788888888 7788999999999999999888876654
No 37
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.84 E-value=2.3e-18 Score=176.14 Aligned_cols=316 Identities=11% Similarity=0.032 Sum_probs=191.4
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...+...+....+..++.++.|+++||+|||+.+.++.+.+.+.... .. .+++.+.+++.|++.|++.+...+.
T Consensus 45 ~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~--~~-~~~~~~~l~~~~~l~G~~~~~~~~~ 121 (406)
T PRK15402 45 AGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLA--IL-LAQSIEQFTLLRFLQGIGLCFIGAV 121 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH--HH-HHccHHHHHHHHHHHHhHhhhHHHH
Confidence 34555666677888888999999999999999999999998877663322 22 3578899999999999999988888
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
...++.|..|+++|++.+++......+|..+|+.+...+..+ .+|+| .+++..++.++..+...+..|+++..++
T Consensus 122 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~----~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (406)
T PRK15402 122 GYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV----LPWRG-MFVLFAALAALSFFGLWRAMPETAGRVG 196 (406)
T ss_pred HHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cCccH-HHHHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 888899999999999999999888888889999887655321 12333 3333334444433333333444321111
Q ss_pred CCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhh---hhcccccccc--ccccchhhhHHHHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFF---YSYQFNNVNG--LMFNLRTRGLNNVFYWGAQMLGS 290 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~---~s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~~ 290 (479)
+ +.+.++..++..+.+++|+++............ +....+.+.. .+++..+.++......++.+++.
T Consensus 197 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~ 268 (406)
T PRK15402 197 E--------KLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGN 268 (406)
T ss_pred c--------cccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 111111122223445667665544333222211 1111122221 23444455666566677888999
Q ss_pred HHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHH
Q 011720 291 VGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQS 370 (479)
Q Consensus 291 ~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (479)
++.+++.|| ++||+....+...+. +...... + .... .. ..........++.+++.+...+
T Consensus 269 ~~~g~l~~r--~~~~~~~~~~~~~~~-~g~~~~~--~---~~~~----------~~--~~~~~~~~~~~~~g~g~~~~~~ 328 (406)
T PRK15402 269 LTLARLTSR--RPLRSLIRMGLWPMV-AGLLLAA--L---ATVI----------SS--HAYLWLTAGLSLYAFGIGLANA 328 (406)
T ss_pred HHHHHHHHh--cCHHHHHHHHHHHHH-HHHHHHH--H---HHHc----------cc--ccHHHHHHHHHHHHHHHHHHhh
Confidence 999999999 667776555543221 1111111 1 0000 11 1222234444556666665555
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 371 MVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 371 ~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
..+... ... +++++++..++++..+.++..++..+..
T Consensus 329 ~~~~~~-~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~ 365 (406)
T PRK15402 329 GLYRLT-LFS-SDVSKGTVSAAMGMLSMLIFTVGIELSK 365 (406)
T ss_pred hHHHHH-hhh-ccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 444332 223 3478899999999999888888877654
No 38
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.84 E-value=4e-19 Score=204.83 Aligned_cols=319 Identities=13% Similarity=0.007 Sum_probs=194.0
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
..+...++..+.+.++++++|+++||+|||++++++.++..++.........+++++.++++|++.|++.+..+++..++
T Consensus 48 ~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 127 (1146)
T PRK08633 48 LTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGI 127 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhh
Confidence 45566677778888999999999999999999999887655544333322234678999999999999999999999999
Q ss_pred hhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhcc--CCcccccch---hHHHHHHHHHHHHHHHHhccCCccccc
Q 011720 140 MTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHR--TDAESVNDK---TYIAFMCFMSAGAALSLAILPPSRVIR 214 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~--~~~~~~~~~---~~~i~~~l~~l~~~l~~~~~~~~~~~r 214 (479)
+.|+.|+++|++++|++.....+|.++|+.++..+.... .....+.|+ .+++.+.+.++.++ ..+..|+.+..+
T Consensus 128 i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 206 (1146)
T PRK08633 128 IPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLI-FAYRLPKVPAAA 206 (1146)
T ss_pred hHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHH-HHhcCcCCCCCC
Confidence 999999999999999999999999999999887664320 000011121 11111121222222 223334332111
Q ss_pred CCCCcccccccCCHHHHHHHHHH-HhhchHHHHHHHHHHHhh---hhhhcccccccc--ccccch-hhhHHHHHHHHHHH
Q 011720 215 DDGTRCTNIKYSKVSTEAIEILK-LFRNWKMLLLFPAAWASN---FFYSYQFNNVNG--LMFNLR-TRGLNNVFYWGAQM 287 (479)
Q Consensus 215 ~d~~~~~~~~~~~~~~~~~~~~~-~~~~~r~ll~~~~~~~~~---~~~s~~~~~~~~--~~f~~~-~~~l~~~~~~i~~~ 287 (479)
.+..+ ...... .++.+..++ .+++|+++.......... ......++.+.. .+++.. ..++.....+++.+
T Consensus 207 ~~~~~--~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~ 283 (1146)
T PRK08633 207 PEVFD--KKKYLF-PKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIG 283 (1146)
T ss_pred ccccc--cccccc-HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHH
Confidence 11000 001111 122222233 334454443322211111 111111133322 233444 56777778899999
Q ss_pred HHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHH
Q 011720 288 LGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAM 367 (479)
Q Consensus 288 i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 367 (479)
+++++.+++.|| .++|+...++..++.+. ..+ +.+ . .+....++..+++|++.+.
T Consensus 284 ~g~~~~g~l~~r--~~~~~~~~~~~~~~~~~-~~~----~~~---------------~---~~~~~~~~~~~~~g~~~~~ 338 (1146)
T PRK08633 284 IGSLLAGRLSGR--HIELGLVPLGALGLALS-LFL----LPT---------------A---PSLASVLVLFFLFGFSAGL 338 (1146)
T ss_pred HHHHHHHHHhCC--ceEccchhHHHHHHHHH-HHH----HHH---------------h---hhHHHHHHHHHHHHHHHHH
Confidence 999999999999 56766555444332111 111 100 1 1223345556677777777
Q ss_pred HHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 368 FQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 368 ~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
..+..+.++.+.. |++.|++++|+.+++++++..++..+.
T Consensus 339 ~~~~~~~~~~~~~-p~~~rg~~~~~~~~~~~lg~~~~~~~~ 378 (1146)
T PRK08633 339 FIVPLNALIQFRA-PEKELGKVLAANNFLQNVGMLLFLALT 378 (1146)
T ss_pred hhHHHHHHHhhcC-CccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 7776777788888 788899999999999988886654443
No 39
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.84 E-value=1.9e-18 Score=179.97 Aligned_cols=237 Identities=11% Similarity=0.078 Sum_probs=150.2
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
+...+...+..+.++.++++++|+++||+|||+.+.++.++..+........ ...+.+.+++.|+++|++.+..+++..
T Consensus 75 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~~~G~~~~~~~~~~~ 153 (465)
T TIGR00894 75 GALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWA-AGGGIALVVFCRVIQGLAQGSVSPATH 153 (465)
T ss_pred HHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHH-HHcCchHHHHHHHHHHHhcccchhhHH
Confidence 3345556777788889999999999999999999999998877643332222 234678899999999999999999999
Q ss_pred hhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccccCC
Q 011720 138 AIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIRDD 216 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r~d 216 (479)
.++.|+.|+++||+.++++.....+|.++|+.+...+... . .+|+ .+.+..++.++..++.+++.++++...++
T Consensus 154 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~----~-~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~ 228 (465)
T TIGR00894 154 KIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES----W-GGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPC 228 (465)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----c-CCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCC
Confidence 9999999999999999999999999999999988766422 0 1343 23333333443333333333333211110
Q ss_pred CCcccc-------cccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhh---hcccccccc--ccccchhhhHHHHHHHH
Q 011720 217 GTRCTN-------IKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFY---SYQFNNVNG--LMFNLRTRGLNNVFYWG 284 (479)
Q Consensus 217 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~---s~~~~~~~~--~~f~~~~~~l~~~~~~i 284 (479)
.++.+. ++++...+......+.+++++++......+...+.+ ...++.+.. .+++..+.++......+
T Consensus 229 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~ 308 (465)
T TIGR00894 229 ISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYL 308 (465)
T ss_pred CCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHH
Confidence 000000 000000000011223445666665554433332211 111244442 24566667777777888
Q ss_pred HHHHHHHHhhhhcccc
Q 011720 285 AQMLGSVGIGYVMDFS 300 (479)
Q Consensus 285 ~~~i~~~~~g~l~Dr~ 300 (479)
+.+++.++.|++.||.
T Consensus 309 ~~~i~~~~~g~l~d~~ 324 (465)
T TIGR00894 309 FAWLCSIFAGYLADFL 324 (465)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999983
No 40
>PRK10504 putative transporter; Provisional
Probab=99.84 E-value=2.2e-18 Score=179.79 Aligned_cols=320 Identities=13% Similarity=0.023 Sum_probs=196.1
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+....+..++.++.|+++||+|||+.++.+.+++.+... .+. .+++.+.++++|+++|++.+...+..
T Consensus 43 s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~--~~~-~~~~~~~l~~~~~l~g~~~~~~~~~~ 119 (471)
T PRK10504 43 SPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL--FCA-LSGTLNELLLARVLQGVGGAMMVPVG 119 (471)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH--HHH-HhCCHHHHHHHHHHHHhhhHHHHHHH
Confidence 344445556667777888999999999999999999988877766332 222 35789999999999999999998888
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCccc--c
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRV--I 213 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~--~ 213 (479)
..++.|+.|+++|++..++.....++|..+|+.+...+..+ .+|+ .|.+..++..+..++.....|+.+. .
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~------~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~ 193 (471)
T PRK10504 120 RLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY------ASWHWIFLINIPVGIIGAIATLMLMPNYTMQTR 193 (471)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh------ccHHHHHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence 88999999999999999999999999999999988766422 3343 3434344444444443433332221 1
Q ss_pred cCCCCcc--------------cccccCCHH--------------------HHH-----HHHHHHhhchHHHHHHHHHHHh
Q 011720 214 RDDGTRC--------------TNIKYSKVS--------------------TEA-----IEILKLFRNWKMLLLFPAAWAS 254 (479)
Q Consensus 214 r~d~~~~--------------~~~~~~~~~--------------------~~~-----~~~~~~~~~~r~ll~~~~~~~~ 254 (479)
|.|.... ...+...+. ++. +...+.+++|++.......+..
T Consensus 194 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 273 (471)
T PRK10504 194 RFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAG 273 (471)
T ss_pred CCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHH
Confidence 2221000 000000000 000 0012344556555444333322
Q ss_pred hhhh---hcccccccc--ccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhh
Q 011720 255 NFFY---SYQFNNVNG--LMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLAS 329 (479)
Q Consensus 255 ~~~~---s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~ 329 (479)
+..+ .+..+.+.. .+++....++......++.+++.++.+++.|| +|||+....+.....+.. .. +..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r--~g~~~~~~~~~~~~~~~~-~~----~~~ 346 (471)
T PRK10504 274 RIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR--FGYRRVLVATTLGLALVS-LL----FML 346 (471)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCchHHHHHHHHHHHHHH-HH----HHh
Confidence 2211 111122222 23455566777777888888888999999999 688887665544322111 11 111
Q ss_pred hcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 330 QLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
.. .. ..........++.|+..+...+....+..+.. |+++++.+.++.++.+.+|.+++..+.
T Consensus 347 ---~~----------~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~g~~ig~~i~ 409 (471)
T PRK10504 347 ---VA----------LL--GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDL-PDNLASSGNSLLSMIMQLSMSIGVTIA 409 (471)
T ss_pred ---cc----------cc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 11 01 11122233344556666665565666777888 778999999999999999988876554
No 41
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.84 E-value=3.2e-18 Score=175.61 Aligned_cols=227 Identities=14% Similarity=0.045 Sum_probs=152.0
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.+....+...++++.+++++.++.|+++||+|||+++..+.+++.+ +...+. .++|.+.++++|+++|++.+...+.
T Consensus 48 ~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~--~~~~~~-~a~~~~~l~~~r~l~Gi~~~~~~~~ 124 (413)
T PRK15403 48 ADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL--ACAATL-FTTSMTQFLIARFIQGTSICFIATV 124 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH--HHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677788899999999999999999999999999999888776 333332 4678999999999999999876666
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCccccc
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIR 214 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r 214 (479)
...++.|..|+++|++.++++.....+|..+|+.++..+..+ ++|+ .|++..++.++..++.++..|+++. +
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~------~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~-~ 197 (413)
T PRK15403 125 GYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF------VHWKVLFAIIAVMGLIAFVGLLLAMPETVK-R 197 (413)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHHHHHHhCCCCcc-c
Confidence 677888999999999999999999999999999988766422 3453 3444444444444333344454321 1
Q ss_pred CCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh-hhhc--ccccccc--ccccchhhhHHHHHHHHHHHHH
Q 011720 215 DDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF-FYSY--QFNNVNG--LMFNLRTRGLNNVFYWGAQMLG 289 (479)
Q Consensus 215 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~-~~s~--~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~ 289 (479)
+++ +.+..+..++..+.+++|+++........... .+++ ..+.+.. .+++..+.++.......+.+++
T Consensus 198 ~~~-------~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~ 270 (413)
T PRK15403 198 GAV-------PFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVA 270 (413)
T ss_pred cCC-------CCChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 110 11112223444456677877665443333222 1111 1233332 2345556677777777788888
Q ss_pred HHHhhhhccc
Q 011720 290 SVGIGYVMDF 299 (479)
Q Consensus 290 ~~~~g~l~Dr 299 (479)
+.+.+++.+|
T Consensus 271 ~~l~~~~~~~ 280 (413)
T PRK15403 271 NAIVARFVKD 280 (413)
T ss_pred HHHHHHHhcc
Confidence 8888887754
No 42
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.83 E-value=4.2e-18 Score=173.66 Aligned_cols=303 Identities=11% Similarity=0.045 Sum_probs=187.7
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...+...+.......+++++.|+++||+|||+.+.++.+++.+.. ..+. .+++.+.+++.|++.|++.+..++.
T Consensus 52 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~--~~~~-~~~~~~~l~~~r~l~G~~~g~~~~~ 128 (394)
T PRK10213 52 ISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSC--LLVS-FANSFSLLLIGRACLGLALGGFWAM 128 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHH--HHHH-HHChHHHHHHHHHHHHHhhHHHHHH
Confidence 455566667777888888999999999999999999999999887632 2222 3578999999999999999999999
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCccccc
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIR 214 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r 214 (479)
...++.|+.|+++|++++++++...++|..+|+.++..+.. .++|+ .+++..++..+..++.....|+.+. +
T Consensus 129 ~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~------~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~-~ 201 (394)
T PRK10213 129 SASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE------LIGWRNVFNAAAVMGVLCIFWIIKSLPSLPG-E 201 (394)
T ss_pred HHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hcCHHHHHHHHHHHHHHHHHHHHHHCCCCCc-c
Confidence 99999999999999999999999999999999999876642 13454 2333333333222222222333211 0
Q ss_pred CCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhh---h-hhhccccccc-cccccchhhhHHHHHHHHHHHHH
Q 011720 215 DDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASN---F-FYSYQFNNVN-GLMFNLRTRGLNNVFYWGAQMLG 289 (479)
Q Consensus 215 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~---~-~~s~~~~~~~-~~~f~~~~~~l~~~~~~i~~~i~ 289 (479)
+ ++. . +..++.+++|+++......+... + .+++..+.+. ..+++....++.....+++.+++
T Consensus 202 ~---------~~~-~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig 268 (394)
T PRK10213 202 P---------SHQ-K---QNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVG 268 (394)
T ss_pred c---------ccc-h---hHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHH
Confidence 0 000 1 11234556676655433222111 1 1122112222 23456666677777889999999
Q ss_pred HHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHH
Q 011720 290 SVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQ 369 (479)
Q Consensus 290 ~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 369 (479)
.++.+++.|| .+|+ ....+......+.+.+. . + . .+.+......+++|+.....+
T Consensus 269 ~~~~~~l~~r--~~~~-~l~~~~~~~~~~~~~l~-----~---~-----------~---~~~~~~~~~~~l~G~~~~~~~ 323 (394)
T PRK10213 269 TSLSSFILKR--SVKL-ALAGAPLVLAVSALVLT-----L---W-----------G---SDKIVATGVAIIWGLTFALVP 323 (394)
T ss_pred HHHHHHHHhc--cchh-HHHHHHHHHHHHHHHHH-----H---H-----------h---hhHHHHHHHHHHHHHHHHhhh
Confidence 9999999998 3333 22222221111111110 0 0 0 112233445566777776666
Q ss_pred HHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 370 SMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 370 ~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
+.....+.+.. | +++++..+......++|..++..+.
T Consensus 324 ~~~~~~~~~~~-~-~~~~~~~~~~~~~~~lg~~~G~~l~ 360 (394)
T PRK10213 324 VGWSTWITRSL-A-DQAEKAGSIQVAVIQLANTCGAAIG 360 (394)
T ss_pred HHHHHHHHHHC-c-ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555666666 3 4445666666666777777776554
No 43
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.83 E-value=3.7e-19 Score=178.98 Aligned_cols=322 Identities=15% Similarity=0.091 Sum_probs=191.0
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...++...+..+++++.|+++||+|||+.+.++.++..+.... .. .+++.+.+++.|++.|++.+...+..
T Consensus 28 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~g~~~~~~~~~~ 104 (379)
T TIGR00881 28 SKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF--FG-FSTSLWVMAALWALNGIFQGMGWPPC 104 (379)
T ss_pred CHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHH--HH-HhhhHHHHHHHHHHHHhhccccCCch
Confidence 3455666777888888999999999999999999999999887763332 22 35689999999999999999999999
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhh-HHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCccccc
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGG-LIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIR 214 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~-~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r 214 (479)
.+++.|+.|+++|++.+++......+|..+|+ ++...+... .+|+ .+++..++..+..++.+++.|+++..+
T Consensus 105 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T TIGR00881 105 GRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL------YSWHWVFIVPGIIAIIVSLICFLLLRDSPQSC 178 (379)
T ss_pred HHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc------CCchhHHHHHHHHHHHHHHHHheeeCCCcccc
Confidence 99999999999999999999999999999999 455544321 3343 233333334333333344444332111
Q ss_pred ---C-CCCcccc-----cccCCHHHHHHH-HHHHhhchHHHHHHHHHHHhhhh---hhcccccccc--ccccchhhhHHH
Q 011720 215 ---D-DGTRCTN-----IKYSKVSTEAIE-ILKLFRNWKMLLLFPAAWASNFF---YSYQFNNVNG--LMFNLRTRGLNN 279 (479)
Q Consensus 215 ---~-d~~~~~~-----~~~~~~~~~~~~-~~~~~~~~r~ll~~~~~~~~~~~---~s~~~~~~~~--~~f~~~~~~l~~ 279 (479)
+ ++.+.+. ++++...++.+. ..+.+++|+++.+....+..... .....+.+.. .+++..+.++..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 258 (379)
T TIGR00881 179 GLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAF 258 (379)
T ss_pred ccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 0 0000000 000000011111 12234555554443322222111 1111133322 234555667777
Q ss_pred HHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHH
Q 011720 280 VFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYF 359 (479)
Q Consensus 280 ~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (479)
...+++.+++.++.+++.||. .+|++..............+ ... . .. .. .+........+
T Consensus 259 ~~~~~~~~~~~~~~g~l~~r~--~~~~~~~~~~~~~~~~~~~~----~~~-~-~~----------~~--~~~~~~~~~~~ 318 (379)
T TIGR00881 259 TLYELGGLVGTLLAGWLSDKL--FNGRRGPLAVFFMALIIVSL----LVY-W-LN----------PA--ANPLMDLICLF 318 (379)
T ss_pred HHHHHHcchhHHHHHHHHHHH--cCCcchHHHHHHHHHHHHHH----HHH-h-cC----------cc--hhHHHHHHHHH
Confidence 788899999999999999983 23222222221111111111 000 0 00 01 11222333444
Q ss_pred HHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 360 SYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 360 ~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
..|+...+..+..+.+..+.. |+++|+++.++.+...++|..++..+.
T Consensus 319 ~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~ 366 (379)
T TIGR00881 319 ALGFLVYGPQMLIGVIASELA-PKKAAGTAAGFVGFFAYLGGILAGLPL 366 (379)
T ss_pred HHHHHHhhhhHHHHHHHHHhc-CcchhHHHHHHHHHhhhhhhhhhhhhH
Confidence 455554455555566778888 788999999999998888887765543
No 44
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.83 E-value=9e-19 Score=176.16 Aligned_cols=319 Identities=15% Similarity=0.047 Sum_probs=180.7
Q ss_pred CCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccC-chhhHHHHHHHHhhhhhhhh
Q 011720 55 QLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHH-DQTFAVVAGAVLGIGAGLLW 133 (479)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~-~~~~li~~R~i~G~g~g~~~ 133 (479)
..++...+...++...+..+++++.|+++||+|||+.++++.++..+.... .. .++ +++.++++|++.|++.+..
T Consensus 33 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~--~~-~~~~~~~~~~~~~~~~g~~~~~~- 108 (366)
T TIGR00886 33 GLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW--AG-LAVQSYSVLLLLRLFIGIAGGSF- 108 (366)
T ss_pred CCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH--HH-HHhhhHHHHHHHHHHHHHhchhh-
Confidence 345566677778888889999999999999999999999999887763322 22 346 8999999999999997654
Q ss_pred hhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhc----cC--CcccccchhHHHHHHHHHHHHHHHHhcc
Q 011720 134 AGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYH----RT--DAESVNDKTYIAFMCFMSAGAALSLAIL 207 (479)
Q Consensus 134 ~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~----~~--~~~~~~~~~~~i~~~l~~l~~~l~~~~~ 207 (479)
+....+++|+.|+++|++.++++....++|..+|+.+...+... .+ ...+|+|..++...++..+..++.+++.
T Consensus 109 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 188 (366)
T TIGR00886 109 ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVG 188 (366)
T ss_pred HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhc
Confidence 55667889999999999999999988888888887776544321 00 0113444443332333333222323333
Q ss_pred CCcccccCCCCcccc--cccCCHHHHHHHHHHHhhchHHHHHHHHHHHhh-hhh--hcccccccc--ccccchhhhHHHH
Q 011720 208 PPSRVIRDDGTRCTN--IKYSKVSTEAIEILKLFRNWKMLLLFPAAWASN-FFY--SYQFNNVNG--LMFNLRTRGLNNV 280 (479)
Q Consensus 208 ~~~~~~r~d~~~~~~--~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~-~~~--s~~~~~~~~--~~f~~~~~~l~~~ 280 (479)
++++.+++++.+.+. ......++..++.++.+++|++++......... ..+ ...++.+.. .+++..+.++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 268 (366)
T TIGR00886 189 ADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYAS 268 (366)
T ss_pred ccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 332221111111000 000000111223445556666554433322211 111 111133332 2345556676667
Q ss_pred HHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHH
Q 011720 281 FYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFS 360 (479)
Q Consensus 281 ~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (479)
...+..+++.++.|++.|| +|||+....+..... ....+ +.. . .. .+ .+........++
T Consensus 269 ~~~~~~~~~~~~~g~l~~r--~g~~~~~~~~~~~~~-~~~~~----~~~-~-~~----------~~--~~~~~~~~~~~~ 327 (366)
T TIGR00886 269 LGGLLGSLARPLGGAISDR--LGGARKLLMSFLGVA-MGAFL----VVL-G-LV----------SP--LSLAVFIVLFVA 327 (366)
T ss_pred HHHHHHHHHhhccchHHHh--hccchhHHHHHHHHH-HHHHH----HHh-c-CC----------Cc--chHHHHHHHHHH
Confidence 7888889999999999999 678765554433221 11111 110 0 00 00 012222222222
Q ss_pred HHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHH
Q 011720 361 YGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAG 400 (479)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g 400 (479)
..+..+..++..+.+++++. +++++++.|+.+...++|
T Consensus 328 ~~~~~g~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 328 LFFFSGAGNGSTFALVPHIF--RRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHhccccchhhhcchhhc--hhhcccHHHHHHHhccCC
Confidence 33333333344666777887 468889988877766543
No 45
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.83 E-value=2.9e-18 Score=172.96 Aligned_cols=306 Identities=14% Similarity=0.054 Sum_probs=176.4
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+..+.++.+++++.|+++||+|||+.+..+...+.. +.......+|++.++++|+++|+|.+.. ...
T Consensus 24 s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~R~l~G~g~~~~-~~~ 99 (368)
T TIGR00903 24 SKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAA---AAGRLLDPFNYEWLLACQLLAALGQPFL-LNA 99 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHH---HHHHHHHhccHHHHHHHHHHHHhHhHHH-HHH
Confidence 355566677888899999999999999999999876655444333 2222112368999999999999999974 445
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchh-HHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKT-YIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
...++|+.|+++|++++++......+|.++++.++..+.. .++|+. +.+..++..+..++..+..||++..++
T Consensus 100 ~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~------~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~ 173 (368)
T TIGR00903 100 FAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT------AGGLQLLIIPIAAVAAAGIILVLAALPALPFQAA 173 (368)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 5566899999999999999999999999999988877642 245653 333344444444444445565442211
Q ss_pred CCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh-hh---hcccccccc-ccccchhhhHHHHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF-FY---SYQFNNVNG-LMFNLRTRGLNNVFYWGAQMLGS 290 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~-~~---s~~~~~~~~-~~f~~~~~~l~~~~~~i~~~i~~ 290 (479)
+ + .+..+..++..+.+++|+++.+....+.... .+ ++. ++++. .+++.. .+.......+ .+.
T Consensus 174 ~--~------~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wl-p~~L~~~g~s~~-~~~~~~l~~~---~g~ 240 (368)
T TIGR00903 174 E--G------FGFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWL-EAALRPAGLEDI-AGDAVALAIL---AGL 240 (368)
T ss_pred C--C------cchHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCChH-HHHHHHHHHH---HHH
Confidence 1 0 0001112333455667777665544333322 11 222 44442 234432 3333323333 333
Q ss_pred HHhhhhcccc-ccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHH
Q 011720 291 VGIGYVMDFS-FQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQ 369 (479)
Q Consensus 291 ~~~g~l~Dr~-~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 369 (479)
+..+++.||. +.+||+........+ ..... +.. . +. .+ . . ....+..+.+++.....
T Consensus 241 ~g~~~~~d~~~r~~~r~~~~~~~~~~--~a~~~----~~~-~-~~----------~~--~-~-~~~~~~~l~~~~~~~~~ 298 (368)
T TIGR00903 241 IGVAVIPDRVARAGLRSIYIRAAALL--IAAFF----LAL-A-FE----------LN--R-L-ALFAFIGIAGLLMLPAY 298 (368)
T ss_pred HHHHHhhHHhhhhhhHHHHHHHHHHH--HHHHH----HHH-H-Hc----------cc--c-H-HHHHHHHHHHHhhhhhH
Confidence 3346777873 123333222111111 11011 111 0 01 01 1 1 12223333444444444
Q ss_pred HHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 370 SMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 370 ~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
+..+.+.+|.+ |++.|+++.|+.+....++...+....
T Consensus 299 ~~~~~~~~~~~-p~~~rgt~~G~~~~~g~~~~~~~~~~~ 336 (368)
T TIGR00903 299 AIIMDWIGKFC-DKELHGKAAGAIGFTSRAISVALALAA 336 (368)
T ss_pred HHHHHHHHHhc-chhhcCcccchhhHHHHHHHHHHHHHH
Confidence 55777889999 889999999999999988886665443
No 46
>PRK15075 citrate-proton symporter; Provisional
Probab=99.82 E-value=4.7e-18 Score=175.53 Aligned_cols=290 Identities=13% Similarity=0.058 Sum_probs=164.1
Q ss_pred HHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchh--------hHHHHHHHHhhhhhhhhhhhhhhhh
Q 011720 70 TTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQT--------FAVVAGAVLGIGAGLLWAGQGAIMT 141 (479)
Q Consensus 70 ~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~--------~li~~R~i~G~g~g~~~~~~~~~i~ 141 (479)
....+++++.|+++||+|||+.++++.+++.+... ++. .+++.+ +++++|+++|++.|..++....+++
T Consensus 67 l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~--l~~-~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~ 143 (434)
T PRK15075 67 LMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTL--LIA-FVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLA 143 (434)
T ss_pred HHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHH--HHH-hCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHH
Confidence 33457889999999999999999999998877333 332 356665 4689999999999999888889999
Q ss_pred cCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccC--CcccccchhHHHHHHHHHHHHHHHHhcc--CCcccccCCC
Q 011720 142 SYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRT--DAESVNDKTYIAFMCFMSAGAALSLAIL--PPSRVIRDDG 217 (479)
Q Consensus 142 e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~--~~~~~~~~~~~i~~~l~~l~~~l~~~~~--~~~~~~r~d~ 217 (479)
|+.|+++||+.++++....++|..+|+.++..+...-. ....++|+..+.+..+. .++.++++ +|+..+..+
T Consensus 144 e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~---~~~~~~~~~~~~e~~~~~~- 219 (434)
T PRK15075 144 EIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLI---VPFIFLIRRSLEETEEFLA- 219 (434)
T ss_pred hhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHH---HHHHHHHHHhcCCCHHHHH-
Confidence 99999999999999998888888777776665421100 00135565332222111 11112221 121100000
Q ss_pred CcccccccCCHHHHHHHHHHHhhchHHHHHH-HHHHHhhhh---hhcccccccc--ccccchhhhHHHHHHHHHHHHHHH
Q 011720 218 TRCTNIKYSKVSTEAIEILKLFRNWKMLLLF-PAAWASNFF---YSYQFNNVNG--LMFNLRTRGLNNVFYWGAQMLGSV 291 (479)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~-~~~~~~~~~---~s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~~~ 291 (479)
.+++.+.++.++. ..++++.++.. ...+..... .....+.+.. .+++..+.++.....+++.+++.+
T Consensus 220 ----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 292 (434)
T PRK15075 220 ----RKHRPSMREIFRS---LAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLP 292 (434)
T ss_pred ----hhhccccccHHHH---HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0001111111121 12333333221 111111111 1111244432 245555667777788899999999
Q ss_pred HhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHH
Q 011720 292 GIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSM 371 (479)
Q Consensus 292 ~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 371 (479)
+.|++.|| +|||+....+........... +.. . . .+ +.........++.+++.+..++.
T Consensus 293 ~~g~l~Dr--~g~r~~~~~~~~~~~~~~~~~----~~~-~--~----------~~--~~~~~~~~~~~~~~~~~g~~~~~ 351 (434)
T PRK15075 293 IGGALSDR--IGRRPVLIAFTVLAILTAYPA----LSW-L--V----------AA--PSFARMLAVELWLSFLYGSYNGA 351 (434)
T ss_pred HHHHHHHH--hcchHHHHHHHHHHHHHHHHH----HHH-H--H----------cC--CchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999 678876554422211111000 000 0 0 01 11112222233344555566665
Q ss_pred HHHHHHHhcCCchhhhHHHHHHHH
Q 011720 372 VYWVIGALADDSETLSRYTGFYKG 395 (479)
Q Consensus 372 ~~~~~~~i~~~~~~r~~~~~~~~~ 395 (479)
.+.++.|.+ |++.|+++.++...
T Consensus 352 ~~~~~~e~~-p~~~rg~~~g~~~~ 374 (434)
T PRK15075 352 MVVALTEVM-PAEVRTAGFSLAYS 374 (434)
T ss_pred HHHHHHHHC-CCCccchheeHHHH
Confidence 667788999 78889999887544
No 47
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.82 E-value=3e-19 Score=184.13 Aligned_cols=240 Identities=13% Similarity=0.111 Sum_probs=170.1
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
.+.-+...+++|.+++++.++++.+.||+.-.+.+....+++.++... .. ..+|.+.+++.|+++|+..+..|++..
T Consensus 80 ~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~--~~-~~~s~~~~ialr~llGl~es~~wP~~~ 156 (495)
T KOG2533|consen 80 GNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFL--TA-AVHSFPGLIALRFLLGLFESGGWPGVV 156 (495)
T ss_pred hhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHH--HH-HHhhhHHHHHHHHHHHHHhcccchHHH
Confidence 345667788999999999999999999999888888887777764322 22 247899999999999999999999999
Q ss_pred hhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccc---
Q 011720 138 AIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVI--- 213 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~--- 213 (479)
.+++.+..+++||+.+|++++..++|.++|+++++++..........+|+ .|++..++.++..++.+++.|..+.+
T Consensus 157 ~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~f 236 (495)
T KOG2533|consen 157 AILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWF 236 (495)
T ss_pred HHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccc
Confidence 99999999999999999999999999999999999864322111223443 45555566665555556666643320
Q ss_pred cCCCC------cccccccCC--HHHHHHHHHHHhhchHHHHHHHHHHHhhhh---hhccccccccc--cccchhhhHHHH
Q 011720 214 RDDGT------RCTNIKYSK--VSTEAIEILKLFRNWKMLLLFPAAWASNFF---YSYQFNNVNGL--MFNLRTRGLNNV 280 (479)
Q Consensus 214 r~d~~------~~~~~~~~~--~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~---~s~~~~~~~~~--~f~~~~~~l~~~ 280 (479)
.+|++ +.+.+.+.. -+.+.++..+.+++|+++......+++... .++.++.++.. +++..+..+.+.
T Consensus 237 l~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~ 316 (495)
T KOG2533|consen 237 LTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLST 316 (495)
T ss_pred cchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccc
Confidence 11111 011000000 002356667788999998877766665441 12222333322 356667778888
Q ss_pred HHHHHHHHHHHHhhhhcccc
Q 011720 281 FYWGAQMLGSVGIGYVMDFS 300 (479)
Q Consensus 281 ~~~i~~~i~~~~~g~l~Dr~ 300 (479)
.+.++.+++.++.|+++||.
T Consensus 317 ~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 317 PYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred hHHhhhHHHHHHHHHHHHHH
Confidence 99999999999999999994
No 48
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.82 E-value=1.2e-17 Score=168.90 Aligned_cols=239 Identities=12% Similarity=0.039 Sum_probs=158.4
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+....+..++.++.|+++||+|||+.+.++.++..+...... .+++.+.+++.|++.|++.+...+..
T Consensus 24 s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~~ 100 (377)
T PRK11102 24 SAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACA---LAQTIDQLIYMRFLHGLAAAAASVVI 100 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHH---HHccHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566667788888899999999999999999999999988776333322 34688999999999999999988888
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
..++.|+.|+++|++.+++.+....+|..+|+.++..+... ++|+ .+.+...+..+..++..+..|+++.++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 173 (377)
T PRK11102 101 NALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW------FSWHAIFWVLALAAILAAALVFFFIPETLPKE- 173 (377)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cChHHHHHHHHHHHHHHHHHHHHhCCccCccc-
Confidence 89999999999999999999999999999999887755321 3343 333334444444333334444432111
Q ss_pred CCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh-hhhcc--ccccc-c-ccccchhhhHHHHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF-FYSYQ--FNNVN-G-LMFNLRTRGLNNVFYWGAQMLGS 290 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~-~~s~~--~~~~~-~-~~f~~~~~~l~~~~~~i~~~i~~ 290 (479)
++ ++.+.++..++..+.+++|+.+........... .+.+. .+.+. . .+++..+.++......++.+++.
T Consensus 174 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~ 247 (377)
T PRK11102 174 RR------QPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMT 247 (377)
T ss_pred cc------CCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 10 011222233333445566665543332222111 11111 01111 1 24455667777778889999999
Q ss_pred HHhhhhccccccCccceeeehhh
Q 011720 291 VGIGYVMDFSFQSLRTRGLVGIG 313 (479)
Q Consensus 291 ~~~g~l~Dr~~~gRr~~~~~g~~ 313 (479)
++.+++.|| +|||+....+..
T Consensus 248 ~~~g~l~~r--~g~~~~~~~~~~ 268 (377)
T PRK11102 248 IINSRFVRR--VGALNMLRFGLW 268 (377)
T ss_pred HHHHHHHHH--hCHHHHHHHHHH
Confidence 999999999 678886665544
No 49
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.82 E-value=7e-18 Score=171.20 Aligned_cols=298 Identities=12% Similarity=0.052 Sum_probs=178.4
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+....+..+++++.|+++||+|||+.+.++.+++.+.... .. .++|.+.++++|+++|++.+..++..
T Consensus 39 s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~--~~-~~~~~~~l~~~~~l~G~~~~~~~~~~ 115 (381)
T PRK03633 39 PTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG--LG-LMVGFWSWLAWRFVAGIGCAMIWVVV 115 (381)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-HhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777888888899999999999999999999999998887763322 22 35789999999999999999988776
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCcccccCC
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVIRDD 216 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~r~d 216 (479)
...+.+..++++||+.++++....++|..+|+.+...+... ..+..++....+. ...+..++.+.+++..++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~- 187 (381)
T PRK03633 116 ESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE------LMSVLPWVTGLVL-AAILPLLFTRILNQQAEN- 187 (381)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc------ccchHHHHHHHHH-HHHHHHHHhcccCCCCCC-
Confidence 66777888899999999999999999999999987755311 1122222211111 111111222212111100
Q ss_pred CCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh----hhhcccccccc-ccccchhhhHHHHHHHHHHHHHHH
Q 011720 217 GTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF----FYSYQFNNVNG-LMFNLRTRGLNNVFYWGAQMLGSV 291 (479)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~----~~s~~~~~~~~-~~f~~~~~~l~~~~~~i~~~i~~~ 291 (479)
+++++ .+ +.+++|+.++.....+..+. .+++. +.+.. .+++....++......++.+++.+
T Consensus 188 ------~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~ 253 (381)
T PRK03633 188 ------HDSTS----IW---PMLKLRQARLGVNGCIISGIVLGSLYGLM-PLYLNHQGMSDASIGFWMALLVSAGILGQW 253 (381)
T ss_pred ------CCCCC----HH---HHHHhcchHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 01111 11 22334443332211111111 12222 33332 244555566666677888899999
Q ss_pred HhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHH
Q 011720 292 GIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSM 371 (479)
Q Consensus 292 ~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 371 (479)
..|++.|| ++||+....+..... +..+.. . . . ... ....++.++......|.
T Consensus 254 ~~g~l~dr--~~~~~~l~~~~~~~~-~~~~~~-----~----~-----------~--~~~---~~~~~l~g~~~~~~~p~ 305 (381)
T PRK03633 254 PIGRLADR--FGRLLVLRVQVFVVI-LGSIAM-----L----S-----------Q--AAM---APALFILGAAGFTLYPV 305 (381)
T ss_pred hhHHHHHH--cCcHHHHHHHHHHHH-HHHHHH-----h----h-----------h--HHH---HHHHHHHHHHHHhHHHH
Confidence 99999999 678875554433321 111110 0 0 0 111 11223344444455565
Q ss_pred HHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 372 VYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 372 ~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
......+.. |+++++...+.+....++|.+++..+.
T Consensus 306 ~~~~~~~~~-~~~~~~~~~~~~~~~~~lG~~igp~~~ 341 (381)
T PRK03633 306 AMAWACEKV-EHHELVAMNQALLLSYTVGSLLGPSFT 341 (381)
T ss_pred HHHHHHccC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666777 566666666777666777777776554
No 50
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.82 E-value=7.4e-18 Score=171.77 Aligned_cols=307 Identities=9% Similarity=0.030 Sum_probs=183.0
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
+.......+.+...+++..+++|+++||+|||+++.++.+++.+....+.. +.+ .++.|+++|++.+...++..
T Consensus 37 ~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~---~~~---~~~~r~l~G~~~a~~~pa~~ 110 (393)
T PRK11195 37 DWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF---GIH---PLLAYGLVGIGAAAYSPAKY 110 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH---HHH---HHHHHHHHHHHHHHHHHHHH
Confidence 444556667777888999999999999999999999999988763333222 122 27899999999999999999
Q ss_pred hhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhH-HHHHHHHHHHHHHHHhccCCcccccCC
Q 011720 138 AIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTY-IAFMCFMSAGAALSLAILPPSRVIRDD 216 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~-~i~~~l~~l~~~l~~~~~~~~~~~r~d 216 (479)
+++.|+.|+++|++++++.....++|.++|+.++..+.. +.|... .+...+..+. .+..+..|+++.+++.
T Consensus 111 a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~-------~~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~ 182 (393)
T PRK11195 111 GILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD-------PHAEAALAVCALIYLLA-ALFNLFIPRLGARRPG 182 (393)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH-HHHHhcCCCCcccccc
Confidence 999999999999999999999999999999999876632 113222 2222111222 2223344443321110
Q ss_pred CCcccccccCCHHHHHHHHHH-HhhchHHHHHHHH--HHH-hhhhhhcccccccc--ccccchhhhHHHHHHHHHHHHHH
Q 011720 217 GTRCTNIKYSKVSTEAIEILK-LFRNWKMLLLFPA--AWA-SNFFYSYQFNNVNG--LMFNLRTRGLNNVFYWGAQMLGS 290 (479)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~-~~~~~r~ll~~~~--~~~-~~~~~s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~~ 290 (479)
.+ .+.....+++++.++ .+++|.+...... .++ ......+.++.+.+ .+++..+.++.....+++.++++
T Consensus 183 -~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~ 258 (393)
T PRK11195 183 -QS---WNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGA 258 (393)
T ss_pred -cC---CCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Confidence 00 000111122222222 2344433221111 111 11111111122222 23455567888888999999999
Q ss_pred HHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHH
Q 011720 291 VGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQS 370 (479)
Q Consensus 291 ~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (479)
++.+++.|| .++|+....+. .+. ..... +.. . ...+......++.|++.+..++
T Consensus 259 ~~~~~l~~~--~~~~~~~~~g~-~~~---~~~~~--~~~---------------~---~~~~~~~~~~~~~G~~~g~~~~ 312 (393)
T PRK11195 259 GAAARLVTL--ETVLRVLPAGI-LMG---LVVLL--MAL---------------Q---HSLLPAYPLLILIGALGGFFVV 312 (393)
T ss_pred HHHHHHhcC--CcccchHHHHH-HHH---HHHHH--HHH---------------H---hHHHHHHHHHHHHHHhhhhhhh
Confidence 999999988 45555433332 111 11100 100 0 1122233445566777666666
Q ss_pred HHHHHHHHhcCCchh-hhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 371 MVYWVIGALADDSET-LSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 371 ~~~~~~~~i~~~~~~-r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
.....+.+.. |++. ++++.++.+..++++..++..+..
T Consensus 313 ~~~~~~q~~~-~~~~~~g~~~a~~~~~~~~~~~~~~~~~~ 351 (393)
T PRK11195 313 PMNALLQHRG-HVLVGAGHSIAVQNFNENLAMLLMLGLYS 351 (393)
T ss_pred hHHHHHHhhC-cccccchhHHHHHhHHHHHHHHHHHHHHH
Confidence 5555665654 4443 689999999999999888877653
No 51
>PRK11043 putative transporter; Provisional
Probab=99.81 E-value=3.2e-17 Score=167.43 Aligned_cols=309 Identities=14% Similarity=0.079 Sum_probs=186.2
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...+...++...+..++++++|+++||+|||+.+.++.++..+. ..... .+++.+.+++.|++.|++.+...+.
T Consensus 38 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~--~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~ 114 (401)
T PRK11043 38 TSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG--SLGML-WVESAAQLLVLRFVQAVGVCSAAVI 114 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH--HHHHH-HhcCHHHHHHHHHHHHhhhHHHHHH
Confidence 44566677788888889999999999999999999999998877652 22222 3578999999999999999887777
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCccccc
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIR 214 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r 214 (479)
...++.|..++++|++..+..+....+|..+|+.++..+.. ..+|+ .+.+..++.++..++.++++ |++.++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 187 (401)
T PRK11043 115 WQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN------HFGWQAIFATLFAITLLLILPTLRLK-PSKKAR 187 (401)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCChHHHHHHHHHHHHHHHHHHHHcC-CCCCcc
Confidence 77888999999999999999988888999999988775532 13454 23333333444333333333 322111
Q ss_pred CCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHH-hhhhhhc--ccccccc-ccccchhhhHHHHHHHHHHHHHH
Q 011720 215 DDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWA-SNFFYSY--QFNNVNG-LMFNLRTRGLNNVFYWGAQMLGS 290 (479)
Q Consensus 215 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~-~~~~~s~--~~~~~~~-~~f~~~~~~l~~~~~~i~~~i~~ 290 (479)
+ ++. +.++..+.+++|+.+........ ...++.+ ..+.+.. .+++....++......++.++++
T Consensus 188 ~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~ 255 (401)
T PRK11043 188 K---------QSQ---DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGG 255 (401)
T ss_pred c---------cch---HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 000 11222334455554332221111 1111111 1122221 34455566776677788888999
Q ss_pred HHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHH
Q 011720 291 VGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQS 370 (479)
Q Consensus 291 ~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (479)
++.+++.|| ++||+....+.....+.....+. ... .. . +........+.+.++..+...+
T Consensus 256 ~~~~~l~~r--~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~-----------~--~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
T PRK11043 256 YGCRAALQK--WGGEQLLPWLLVLFAVSVIAIWL--ASL---LS-----------H--PSLVPLLIPFCVMAAANGAIYP 315 (401)
T ss_pred HHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHH--HHH---hc-----------c--CcHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 56776544433322211111111 100 00 1 1222333444556666666666
Q ss_pred HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 371 MVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 371 ~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
.......+.. +++++++.++++..+..+...+..+.
T Consensus 316 ~~~~~~~~~~--~~~~g~~~g~~~~~~~~~~~~~~~~~ 351 (401)
T PRK11043 316 IVVAQALRPF--PQATGKAAALQNTLQLGLCFLASLLV 351 (401)
T ss_pred HHHHHHhhhC--cccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5554444545 46789999999988776655554443
No 52
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.81 E-value=3.2e-18 Score=173.07 Aligned_cols=308 Identities=15% Similarity=0.086 Sum_probs=174.4
Q ss_pred HHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchh--------hHHHHHHHHhhhhhhhhhhhhhh
Q 011720 68 LYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQT--------FAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 68 ~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~--------~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
.+....+++++.|+++||+|||+++.++.+++.+. ..+.. .+++.+ .++++|+++|++.+..++....+
T Consensus 44 ~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 120 (394)
T TIGR00883 44 GFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIG--TLLIG-LLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALY 120 (394)
T ss_pred HHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHH--HHHHh-hCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHH
Confidence 33444578899999999999999999999887763 32222 244543 58999999999999999999999
Q ss_pred hhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCC--cccccchhHH-HHHHHHHHHHHHHHhccCCcccccCC
Q 011720 140 MTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTD--AESVNDKTYI-AFMCFMSAGAALSLAILPPSRVIRDD 216 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~--~~~~~~~~~~-i~~~l~~l~~~l~~~~~~~~~~~r~d 216 (479)
+.|+.|+++|++..++......+|.++|+.+...+...... ...++|+... +..++..+...+ ....||++..+++
T Consensus 121 ~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 199 (394)
T TIGR00883 121 LAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETPVFEKA 199 (394)
T ss_pred hhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHHH
Confidence 99999999999999999999999999998877654321000 0134565332 222222222111 1222332211110
Q ss_pred CCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhh---hcccccccc--ccccchhhhHHHHHHHHHHHHHHH
Q 011720 217 GTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFY---SYQFNNVNG--LMFNLRTRGLNNVFYWGAQMLGSV 291 (479)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~---s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~~~ 291 (479)
+.+. .+.+.+ .++.++. ++++++......+.....+ ....+.+.. .+.+..+.+.......++.+++.+
T Consensus 200 ~~~~-~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 273 (394)
T TIGR00883 200 QEKH-KKKRGP----IRETLTK-HRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIP 273 (394)
T ss_pred Hhcc-ccccCC----HHHHHHh-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHH
Confidence 0000 001111 2222221 1112333332222222211 111133321 223444556666778888999999
Q ss_pred HhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHH
Q 011720 292 GIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSM 371 (479)
Q Consensus 292 ~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 371 (479)
+.|++.|| +|||+....+............ ... . .. ..........+..++..+..++.
T Consensus 274 ~~g~l~dr--~g~~~~~~~~~~~~~~~~~~~~---~~~----~----------~~--~~~~~~~~~~~~~g~~~~~~~~~ 332 (394)
T TIGR00883 274 LSGALSDR--IGRRPVLIIFTVLAALLAVPLL---MAL----L----------DS--GSFTLFFFLVLGLALIGGMYTGP 332 (394)
T ss_pred HHHHHHHH--hchHHHHHHHHHHHHHHHHHHH---HHH----h----------cC--CchHHHHHHHHHHHHHHHHHhhh
Confidence 99999999 6788754433222111111111 100 0 01 12233344455667777677777
Q ss_pred HHHHHHHhcCCchhhhHHHHHH-HHHHHHHHHHHhhh
Q 011720 372 VYWVIGALADDSETLSRYTGFY-KGVQSAGAAVAWQV 407 (479)
Q Consensus 372 ~~~~~~~i~~~~~~r~~~~~~~-~~~~~~g~~i~~~~ 407 (479)
.+.++.|.+ |+++|+++.++. .....+|..++..+
T Consensus 333 ~~~~~~~~~-p~~~~~~~~~~~~~~~~~~g~~~~p~~ 368 (394)
T TIGR00883 333 MGSFLPELF-PTEVRYTGASLAYNLAGAIFGGFAPYI 368 (394)
T ss_pred HHHHHHHhC-CccceeeEeeehhHhHHHHHhhHHHHH
Confidence 788899999 778888888763 33344555444443
No 53
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.81 E-value=9.1e-18 Score=171.49 Aligned_cols=301 Identities=10% Similarity=0.033 Sum_probs=183.2
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhh
Q 011720 62 NNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMT 141 (479)
Q Consensus 62 ~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~ 141 (479)
+...++.+....+++++.|+++||+|||+.+.++.+...+.... .. ..++.+.+++.|++.|++.+. .+....++.
T Consensus 57 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~ 132 (408)
T PRK09874 57 GLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVL--MG-LAQNIWQFLILRALLGLLGGF-VPNANALIA 132 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHH--HH-HHhhHHHHHHHHHHHHHhhhh-HHhHHHHHH
Confidence 45566777778889999999999999999999988876663222 22 346789999999999998765 455667788
Q ss_pred cCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccccCCCCcc
Q 011720 142 SYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIRDDGTRC 220 (479)
Q Consensus 142 e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r~d~~~~ 220 (479)
|..|+++|++.++++.....+|..+|+.+...+... .+|+ .+++..++.++..++..++.|+++...+ +
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-- 202 (408)
T PRK09874 133 TQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS------YGLRPVFFITASVLFLCFLVTLFCIRENFQPVS--K-- 202 (408)
T ss_pred HhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH------hCHHHHHHHHHHHHHHHHHHHHHHhccCccccc--c--
Confidence 889999999999999999999999999887765321 2343 3444344444443333344443221100 0
Q ss_pred cccccCCHHHHHHHHHHHhhchHHHHHH-HHHHHhhhhhhcc---ccccccc-cccch----hhhHHHHHHHHHHHHHHH
Q 011720 221 TNIKYSKVSTEAIEILKLFRNWKMLLLF-PAAWASNFFYSYQ---FNNVNGL-MFNLR----TRGLNNVFYWGAQMLGSV 291 (479)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~r~ll~~-~~~~~~~~~~s~~---~~~~~~~-~f~~~----~~~l~~~~~~i~~~i~~~ 291 (479)
++ ..+.++.++.+++++.++.. ...+..+...... ++.+... ..+.. ..++.....+++.+++.+
T Consensus 203 ----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~ 276 (408)
T PRK09874 203 ----KE--MLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAP 276 (408)
T ss_pred ----hh--hhHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 11223344555666643322 1111111111110 1222111 11111 123444456788888889
Q ss_pred HhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHH
Q 011720 292 GIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSM 371 (479)
Q Consensus 292 ~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 371 (479)
..|++.|| +|||+....+..... +.... .. + . .......+..++.|++.+...+.
T Consensus 277 ~~g~l~dr--~g~~~~~~~~~~~~~-~~~~~----~~----~-----------~---~~~~~~~~~~~~~g~~~~~~~~~ 331 (408)
T PRK09874 277 RLGKLGDR--IGPEKILITALIFSV-LLLIP----MS----F-----------V---QTPLQLGILRFLLGAADGALLPA 331 (408)
T ss_pred HHHHHHhc--cccchhHHHHHHHHH-HHHHH----HH----H-----------h---ccHHHHHHHHHHHHhhhHhhHHH
Confidence 99999999 678876655433221 11111 10 0 0 11223344556678888777776
Q ss_pred HHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 372 VYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 372 ~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
....+.+.. +++.+++.++++...+.+|..++..+.
T Consensus 332 ~~~~~~~~~-~~~~~g~~~~~~~~~~~~g~~~gp~~~ 367 (408)
T PRK09874 332 VQTLLVYNS-SNQIAGRIFSYNQSFRDIGNVTGPLMG 367 (408)
T ss_pred HHHHHHHhC-CcccceeeehHHHHHHHHHHHhhHHHH
Confidence 666666666 677889999999998888888886665
No 54
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.81 E-value=5.5e-18 Score=177.00 Aligned_cols=239 Identities=13% Similarity=-0.016 Sum_probs=141.2
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+....+..+++++.|+++||+|||+.+.++.+++.+... ... .+++.+.+++.|++.|++.+... ..
T Consensus 69 s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~--~~~-~~~s~~~l~~~r~l~G~~~~~~~-~~ 144 (476)
T PLN00028 69 TKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVF--CMS-LVSSATGFIAVRFFIGFSLATFV-SC 144 (476)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH--HHH-HhcCHHHHHHHHHHHHHHHHhhH-HH
Confidence 344444556667777888999999999999999999998887766322 222 35688899999999999998654 34
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhc--cC-Ccccccch-hHHHHHHHHHHHHHHHHhccCCccc
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYH--RT-DAESVNDK-TYIAFMCFMSAGAALSLAILPPSRV 212 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~--~~-~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~ 212 (479)
..+++|+.|+++||+++|+.....++|..+|+.+...+... .. .....+|+ .+++..++.++..++.+++.++.+.
T Consensus 145 ~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~ 224 (476)
T PLN00028 145 QYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPD 224 (476)
T ss_pred HHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCC
Confidence 45788999999999999999887777877776655332110 00 00112454 3333333343333333333322221
Q ss_pred ccCCCCcccc-cccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh-h---hhcccccccc--ccccchhhhHHHHHHHHH
Q 011720 213 IRDDGTRCTN-IKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF-F---YSYQFNNVNG--LMFNLRTRGLNNVFYWGA 285 (479)
Q Consensus 213 ~r~d~~~~~~-~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~-~---~s~~~~~~~~--~~f~~~~~~l~~~~~~i~ 285 (479)
++.++.+.+. .++++.. +...+.+++++.+++....+.... . .++. +.+.. .+++..+.++.....+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~l~~~~g~s~~~a~~~~~~~~~~ 300 (476)
T PLN00028 225 GNYRELKKSGTMPKDSFS---KVLRYGVTNYRTWILALTYGYSFGVELTMDNII-AEYFYDRFGLSLETAGAIAASFGLM 300 (476)
T ss_pred CchhhHHhcCccccccHH---HHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHH-HHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 1100000000 0111111 222334566776554443322211 1 1111 33321 345666677777788999
Q ss_pred HHHHHHHhhhhccccccCcc
Q 011720 286 QMLGSVGIGYVMDFSFQSLR 305 (479)
Q Consensus 286 ~~i~~~~~g~l~Dr~~~gRr 305 (479)
.+++.++.|+++|| ++||
T Consensus 301 ~~ig~~~~G~lsDr--~~~r 318 (476)
T PLN00028 301 NLFARPAGGYLSDV--AARR 318 (476)
T ss_pred HHHHHhhhHHHHHH--HHHh
Confidence 99999999999999 4554
No 55
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.81 E-value=1.4e-17 Score=169.07 Aligned_cols=230 Identities=13% Similarity=0.075 Sum_probs=154.3
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
+....+...+....+..+++++.|++.||+|||+++.++.++..+ +..+.. .++|.+.+++.|++.|++.+...+..
T Consensus 36 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~--~~~l~~-~~~~~~~l~~~r~l~G~~~~~~~~~~ 112 (382)
T PRK10091 36 SIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVI--GNAMFT-LSSSYLMLAIGRLVSGFPHGAFFGVG 112 (382)
T ss_pred CHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHH--HHHHHH-HhCcHHHHHHHHHHHHhhhHHHHHHH
Confidence 445566778888899999999999999999999999999998776 333332 46889999999999999999988888
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
..++.|+.|+++|++.++++.....+|..+|+.++..+.. ..+|+ .|.+..++..+..+...+..|+.+. ++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~------~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~-~~ 185 (382)
T PRK10091 113 AIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ------EFSWRYTFLLIAVFNIAVLASIYFWVPDIRD-EA 185 (382)
T ss_pred HHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh------hccHHHHHHHHHHHHHHHHHHHHHhCCCCCc-cc
Confidence 8889999999999999999999999999999888765532 13444 3333333333333333333444221 11
Q ss_pred CCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhh--h--hhhcccccccc--ccccchhhhHHHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASN--F--FYSYQFNNVNG--LMFNLRTRGLNNVFYWGAQMLG 289 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~--~--~~s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~ 289 (479)
+.+.+ +.++.+++++.+.......... . ..++. ..+.. .+++..+.++.....+++.+++
T Consensus 186 ---------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~ig 251 (382)
T PRK10091 186 ---------KGGLR----EQFHFLRSPAPWLIFAATMFGNAGVFAWFSYI-KPYMMFISGFSETSMTFIMMLVGLGMVLG 251 (382)
T ss_pred ---------ccCHH----HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 01111 1233445555544332222211 1 01222 22221 3456666777778889999999
Q ss_pred HHHhhhhccccccCccceeeehh
Q 011720 290 SVGIGYVMDFSFQSLRTRGLVGI 312 (479)
Q Consensus 290 ~~~~g~l~Dr~~~gRr~~~~~g~ 312 (479)
.++.+++.|| +|||+....+.
T Consensus 252 ~~~~g~l~~r--~~~~~~~~~~~ 272 (382)
T PRK10091 252 NLLSGRLSGR--YSPLRIAAVTD 272 (382)
T ss_pred hHHHheeccc--cCchhHHHHHH
Confidence 9999999999 67877655543
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.81 E-value=3e-17 Score=167.06 Aligned_cols=235 Identities=15% Similarity=0.097 Sum_probs=152.9
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+....+..+++++.|+++||+|||+.+.++.+.+.+.... .. .+++.+.++++|++.|++.+..++..
T Consensus 36 s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~--~~-~~~~~~~~~~~~~l~g~~~~~~~~~~ 112 (392)
T PRK10473 36 SEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL--CS-LAETSSLFLAGRFLQGIGAGCCYVVA 112 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH--HH-HhCcHHHHHHHHHHHHhhhhHHHHHH
Confidence 3445566677777788889999999999999999999998887763322 22 35678889999999999999988888
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
..++.|..|+++|++.+++.+....+|..+|+.+...+.. ..+|+ .+.+...+..+..++.++..||++.+++
T Consensus 113 ~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~------~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 186 (392)
T PRK10473 113 FAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML------KFPWQSLFYTMAAMGILVLLLSLFILKETRPARA 186 (392)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CcChHHHHHHHHHHHHHHHHHHHHHcCCCCCccc
Confidence 8999999999999999999999999999999988765532 13453 2334344444444443444454332111
Q ss_pred CCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHh---hhhhhccccccc--cccccchhhhHHHHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWAS---NFFYSYQFNNVN--GLMFNLRTRGLNNVFYWGAQMLGS 290 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~---~~~~s~~~~~~~--~~~f~~~~~~l~~~~~~i~~~i~~ 290 (479)
+ ++... .++..+.+++++++......... ...+....+.+. ..+++..+.++.....+++.+++.
T Consensus 187 ~-------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 256 (392)
T PRK10473 187 P-------AASSK---PRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVS 256 (392)
T ss_pred C-------Cccch---HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 01111 12223344555543322221111 111111112222 124455556777777889999999
Q ss_pred HHhhhhccccccCccceeeehh
Q 011720 291 VGIGYVMDFSFQSLRTRGLVGI 312 (479)
Q Consensus 291 ~~~g~l~Dr~~~gRr~~~~~g~ 312 (479)
++.+++.|| +|||+....+.
T Consensus 257 ~~~~~l~~r--~g~~~~~~~~~ 276 (392)
T PRK10473 257 FSTPFALGI--FKPRTLMLTSQ 276 (392)
T ss_pred HHHHHHHHh--cCHHHHHHHHH
Confidence 999999999 67887665554
No 57
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.81 E-value=4.5e-18 Score=175.90 Aligned_cols=326 Identities=16% Similarity=0.090 Sum_probs=181.2
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhh-hccCchhhHHHHHHHHhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYY-NHHHDQTFAVVAGAVLGIGAGLLWA 134 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~-~~~~~~~~li~~R~i~G~g~g~~~~ 134 (479)
.++...+...++...+..+++++.|+++||+|||+.+.++.+++.+........ ....+.+.+++.|++.|++.|..++
T Consensus 58 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~ 137 (438)
T TIGR00712 58 FSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWP 137 (438)
T ss_pred CCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchH
Confidence 345556667778888899999999999999999999999887776633222111 1124577888999999999999888
Q ss_pred hhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccc
Q 011720 135 GQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVI 213 (479)
Q Consensus 135 ~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~ 213 (479)
.....+.|+.|+++||+++++++...++|..+++.+....... ..+|+ .+++..++.++..++..++.|+++..
T Consensus 138 ~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~-----~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 212 (438)
T TIGR00712 138 PCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW-----FNDWHAALYFPAICAIIVALFAFAMMRDTPQS 212 (438)
T ss_pred HHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH-----hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHh
Confidence 8888899999999999999999999999998887665432211 12343 34343444444333333444433211
Q ss_pred ---cCC----CCcccc-cccCCHHHHHHHHH--HHhhchHHHHHHHHHHHhhh-hh--hcccccccc--ccccchhhhHH
Q 011720 214 ---RDD----GTRCTN-IKYSKVSTEAIEIL--KLFRNWKMLLLFPAAWASNF-FY--SYQFNNVNG--LMFNLRTRGLN 278 (479)
Q Consensus 214 ---r~d----~~~~~~-~~~~~~~~~~~~~~--~~~~~~r~ll~~~~~~~~~~-~~--s~~~~~~~~--~~f~~~~~~l~ 278 (479)
+++ ++.... .++.+.+.+.++.+ +.+++++++........... .+ ....+.+.. .+++....++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~ 292 (438)
T TIGR00712 213 CGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWA 292 (438)
T ss_pred cCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHH
Confidence 000 000000 00000000112211 23456666554433222211 11 111244443 24555566777
Q ss_pred HHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHH
Q 011720 279 NVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLY 358 (479)
Q Consensus 279 ~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (479)
...+.++.+++.++.|++.|| ++|+++...+........... ..+. .. . . .+........
T Consensus 293 ~~~~~~~~~ig~~~~g~l~dr--~~~~~~~~~~~~~~~~~~~~~----~~~~--~~--------~-~---~~~~~~~~~~ 352 (438)
T TIGR00712 293 YFLYEYAGIPGTLLCGWMSDK--VFKGNRGATGVFFMTLVTIAV----IVYW--MN--------P-A---GNPLVDMICM 352 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--hccCcccHHHHHHHHHHHHHH----HHHH--hc--------C-C---CchHHHHHHH
Confidence 778888999999999999999 444433333321111110111 1000 00 0 0 1111112222
Q ss_pred HHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHH-HHHhhh
Q 011720 359 FSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGA-AVAWQV 407 (479)
Q Consensus 359 ~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~-~i~~~~ 407 (479)
+..|+...+..........+.+ ++++|+++.|+++....++. +++..+
T Consensus 353 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~gg~~~gp~l 401 (438)
T TIGR00712 353 IVIGFLIYGPVMLIGLHALELA-PKKAAGTAAGFTGLFGYLGGSVAASAI 401 (438)
T ss_pred HHHHHHHccHHHHHHHHHHHhc-ChhheeeehhhhchHHHhhhhhhcchh
Confidence 2333322222222233456888 77889999999987776653 444333
No 58
>PRK03699 putative transporter; Provisional
Probab=99.79 E-value=2.1e-17 Score=168.44 Aligned_cols=304 Identities=17% Similarity=0.144 Sum_probs=180.2
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...+...+..+.++.++.+++|++.||+|||+.+.++.+++.+... +.. .+++.+.+++.|++.|++.|...+.
T Consensus 39 ~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~--l~~-~~~~~~~~~~~~~l~G~~~g~~~~~ 115 (394)
T PRK03699 39 LPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVA--GLM-FSHSLALFSIAMFVLGVVSGITMSI 115 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH--HHH-HcchHHHHHHHHHHHHHhhHhhccc
Confidence 3455566667778888899999999999999999999999887766332 222 3578899999999999999998888
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchh-HHHHHHHHHHHHHHHHhccCCccccc
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKT-YIAFMCFMSAGAALSLAILPPSRVIR 214 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~~~r 214 (479)
...++.|+.|+++||+.++.......+|..+++.+...+.. ...+|+. +.+..++.++..++.++..+|++.++
T Consensus 116 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-----~~~gw~~~f~~~~~~~~~~~~~~~~~~~p~~~~~ 190 (394)
T PRK03699 116 GTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA-----RSIEWYWVYACIGLVYVAIFILTLFSEFPALGKH 190 (394)
T ss_pred hhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 88899999999999999999888888888888877654421 1234542 33323333332222232222321111
Q ss_pred CCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh----hhhcccccccc--ccccchhhhHHHHHHHHHHHH
Q 011720 215 DDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF----FYSYQFNNVNG--LMFNLRTRGLNNVFYWGAQML 288 (479)
Q Consensus 215 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~----~~s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i 288 (479)
+++ ++++ +.+ ...++++++.....+.... ..++. +.+.. .+++..+.+.....+.++..+
T Consensus 191 ~~~-----~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~l~~~~g~s~~~~~~~~~~~~~~~~i 256 (394)
T PRK03699 191 APK-----ADKP----VAK----EKWGIGVLFLAIAALLYILAQLTFISWV-PEYAQKKFGMSLEDAGNLVSNFWMAYMV 256 (394)
T ss_pred Ccc-----ccCc----ccc----ccCChHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCChHHhhHHHHHHHHHHHH
Confidence 100 0000 011 1123444333222221111 11222 44442 245566667777778888999
Q ss_pred HHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHH
Q 011720 289 GSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMF 368 (479)
Q Consensus 289 ~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 368 (479)
+.++.+++.|| ++||+......... .+. +.. +. .. ++........+..|+..+..
T Consensus 257 g~~~~g~l~dr--~~~~~~l~~~~~~~-~~~--~~~--~~----~~--------------~~~~~~~~~~~~~G~~~~~~ 311 (394)
T PRK03699 257 GMWIFSFIVRF--FDLQRILTVLAGLA-LVL--MYL--FV----NT--------------DDPSHLLYAILGLGFFSSAI 311 (394)
T ss_pred HHHHHHHHHHH--hchhhHHHHHHHHH-HHH--HHH--HH----Hc--------------CCchHHHHHHHHHHHHHHHH
Confidence 99999999999 67776544332221 111 110 10 01 11112233445566666666
Q ss_pred HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 369 QSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 369 ~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
.+....+..+.. ++.+++..+.......+|..++..+.
T Consensus 312 ~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~i~p~~~ 349 (394)
T PRK03699 312 YTTIITLGSQQT--KVASPKLVNFILTCGTIGTMLTFVVT 349 (394)
T ss_pred HHHHHHHHHHHc--cCCCHHHHHHHHHhhhHHHHHHHHHH
Confidence 665555556655 23445667777777777777665544
No 59
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.79 E-value=4.8e-17 Score=165.69 Aligned_cols=309 Identities=13% Similarity=0.057 Sum_probs=185.1
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...+...+.......+++++.|+++||+|||+.+.++.+...+.... .. .+++.+.+++.|++.|++.+...+.
T Consensus 40 ~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~--~~-~~~~~~~l~~~~~~~g~~~~~~~~~ 116 (394)
T PRK11652 40 VREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLV--AL-FAHSLTVLIAASAIQGLGTGVGGVM 116 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHH--HH-HHccHHHHHHHHHHHHhhhhHHHHH
Confidence 34556667778888888999999999999999999999998877663332 22 3578999999999999999987777
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCccccc
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIR 214 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r 214 (479)
...+..|..++++|+++.+++.....+|..+|+.+...+.. ..+|+ .+.+..++..+..++..++.||++..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (394)
T PRK11652 117 ARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT------LFGWRACYLFLLLLGAGVTFSMARWMPETRPAD 190 (394)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------ccChHHHHHHHHHHHHHHHHHHHHhCCccCccc
Confidence 77788898899999999999999999999999988765532 13454 233323333332223333344432111
Q ss_pred CCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHH--HHHhhh--hhhcccccccc--ccccchhhhHHHHHHHHHHHH
Q 011720 215 DDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPA--AWASNF--FYSYQFNNVNG--LMFNLRTRGLNNVFYWGAQML 288 (479)
Q Consensus 215 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~--~~~~~~--~~s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~i 288 (479)
+ ++++.++ ...+.+++|+++..... .....+ +..+. +.+.. .+++..+.++......++.++
T Consensus 191 ~--------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 258 (394)
T PRK11652 191 A--------RRTRVLA---SYRTLLSNRRFNCYLLMLIGTLAGIAVFEACS-GVLMGAVLGLSSMTVSILFILPIPAAFF 258 (394)
T ss_pred c--------chhHHHH---HHHHHHcChHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 0 0111122 22233445544322111 111111 11111 22222 234545556666677888888
Q ss_pred HHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHH
Q 011720 289 GSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMF 368 (479)
Q Consensus 289 ~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 368 (479)
++.+.+++.||+ +|+. ..+...+. +....... ... . .. ..........++.+++.+..
T Consensus 259 g~~~~~~l~~~~--~~~~--~~~~~~~~-~~~~~~~~-~~~----~----------~~--~~~~~~~~~~~~~~~g~~~~ 316 (394)
T PRK11652 259 GAWFAGRPNKRF--STLM--WQSVICCL-LAGLLMWI-PGW----F----------GV--MNVWTLLVPAALFFFGAGML 316 (394)
T ss_pred HHHHHHHHHHHH--HHHH--HHHHHHHH-HHHHHHHH-HHH----h----------cc--ccHHHHHHHHHHHHHHHHHH
Confidence 888888888873 3322 12211111 11111100 000 0 01 11223344445566666666
Q ss_pred HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 369 QSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 369 ~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
.+....+..+.. +++++++.++....+.+|.+++..+..
T Consensus 317 ~~~~~~~~~~~~--~~~~g~~~~~~~~~~~lg~~~~~~~~~ 355 (394)
T PRK11652 317 FPLATSGAMEPF--PYLAGTAGALLGGLQNIGSGLAALLSA 355 (394)
T ss_pred HHHHHHHHHhhc--cccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 776666666766 467889999999888888888876553
No 60
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.79 E-value=6.6e-17 Score=165.18 Aligned_cols=305 Identities=13% Similarity=0.131 Sum_probs=180.2
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+.......+.++++|+++||+|||+.+.++.+...+...... .+++.+.+++.|++.|++.+..+++.
T Consensus 44 s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~~~l~g~~~~~~~~~~ 120 (400)
T PRK11646 44 AAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMA---IAHEPWLLWLSCILSGLGGTLFDPPR 120 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 355556666666666667789999999999999999999988777433322 34688999999999999999888888
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
.+++.|..|+++||+++|+.....++|..+|+.++..+. + ++|+ .+.+...+.++..++..++.||.+..+.
T Consensus 121 ~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~------~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 193 (400)
T PRK11646 121 TALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q------YDFRLVCATGAVLFVLAAAFNAWLLPAYKLSTV 193 (400)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H------hhHHHHHHHHHHHHHHHHHHHHHhCCccccccc
Confidence 889999999999999999999999999999999887664 2 2343 2333233333333333344443221110
Q ss_pred CCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhh---hhcccccccc-ccccchhhhHHHHHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFF---YSYQFNNVNG-LMFNLRTRGLNNVFYWGAQMLGSV 291 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~---~s~~~~~~~~-~~f~~~~~~l~~~~~~i~~~i~~~ 291 (479)
+++.+++++ +.+++|+++............ ....++.+.. ...+..+.++.....+++...+..
T Consensus 194 ---------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~ 261 (400)
T PRK11646 194 ---------RTPVREGMT---RVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLY 261 (400)
T ss_pred ---------chhhHHHHH---HHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHH
Confidence 111122222 334556554332221111110 1111133322 122334455555555555555555
Q ss_pred HhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHH
Q 011720 292 GIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSM 371 (479)
Q Consensus 292 ~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 371 (479)
..+++.||+ .+.|+....+..... +.... +.. . .+........++++.+.+...+.
T Consensus 262 ~~~~~~~~r-~~~~~~~~~~~~~~~-~~~~~----l~~---------------~---~~~~~~~~~~~l~~~g~~~~~p~ 317 (400)
T PRK11646 262 PIARWSEKR-FRLEHRLMAGLLIMS-LSMFP----IGM---------------V---SNLQQLFTLICLFYIGSIIAEPA 317 (400)
T ss_pred HHHHHHHHh-cchhHHHHHHHHHHH-HHHHH----HHH---------------h---hhHHHHHHHHHHHHHHHHHHHcc
Confidence 556666653 333433333322211 11111 100 0 11122223334456666666666
Q ss_pred HHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 372 VYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 372 ~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
...++.+.. |+++|+++.++++...++|..++..+.
T Consensus 318 ~~~~~~~~~-p~~~~g~~~g~~~~~~~~g~~ig~~l~ 353 (400)
T PRK11646 318 RETLSASLA-DARARGSYMGFSRLGLALGGAIGYIGG 353 (400)
T ss_pred HHHHHHhcC-CcccchhhhhHHHHHHHHHHHhcccch
Confidence 667777888 788999999999998888888886654
No 61
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.79 E-value=2.8e-17 Score=168.10 Aligned_cols=242 Identities=11% Similarity=0.003 Sum_probs=148.0
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhh--hccCchhhHHHHHHHHhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYY--NHHHDQTFAVVAGAVLGIGAGLLW 133 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~--~~~~~~~~li~~R~i~G~g~g~~~ 133 (479)
.++.......++....+++..+..|++.||+|+|+.+.++.++..+.+...... +..++++.+++.|++.|++ |..+
T Consensus 67 ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f 145 (462)
T PRK15034 67 FTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANF 145 (462)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhH
Confidence 456666777788888899998889999999999999999998877644332221 1236899999999999998 6677
Q ss_pred hhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhh-----hhh--ccCC----cc-cccch-hHHHHHHHHHHHH
Q 011720 134 AGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFI-----MNY--HRTD----AE-SVNDK-TYIAFMCFMSAGA 200 (479)
Q Consensus 134 ~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~-----i~~--~~~~----~~-~~~~~-~~~i~~~l~~l~~ 200 (479)
++....++++.|+++||+++|++....++|..+++.+... +.. .... .+ ..+|+ ..++..++.++..
T Consensus 146 ~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~ 225 (462)
T PRK15034 146 ASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIAT 225 (462)
T ss_pred HHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999999999976666666555444322 110 0000 00 11122 1222233333433
Q ss_pred HHHHhccCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhh--h-hhhccccccccccccchhhhH
Q 011720 201 ALSLAILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASN--F-FYSYQFNNVNGLMFNLRTRGL 277 (479)
Q Consensus 201 ~l~~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~--~-~~s~~~~~~~~~~f~~~~~~l 277 (479)
++.+++.++.+.. +.+ +++..+.+|+|+.+++..+.+.+. + .+++.++.+....++......
T Consensus 226 i~~~~~~~~~~~~-----------~~~----~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~~~l~ 290 (462)
T PRK15034 226 IAAWSGMNDIASS-----------RAS----IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILR 290 (462)
T ss_pred HHHHHhCCCcccc-----------ccC----HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHH
Confidence 4444444432210 111 234456778888777665544321 1 123222333322232222222
Q ss_pred HHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhh
Q 011720 278 NNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIV 315 (479)
Q Consensus 278 ~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~ 315 (479)
......+...+..+++|+++|| +|+|+...++.+.+
T Consensus 291 ~~~l~~l~~~l~rplgG~LADR--iG~~~vl~~~~i~~ 326 (462)
T PRK15034 291 LAFFGPFIGAIARSVGGAISDK--FGGVRVTLINFIFM 326 (462)
T ss_pred HHHHHHHHHHHHHHhhHHHHHh--cCchHHHHHHHHHH
Confidence 2333456677888999999999 77888777666544
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.78 E-value=3.1e-17 Score=162.86 Aligned_cols=284 Identities=20% Similarity=0.219 Sum_probs=196.3
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+.......+++++.|+++||+|||+.+.++.++..+...... ..++.+.++++|++.|++.+..++..
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~~ 108 (352)
T cd06174 32 SASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA---FASSLWLLLVGRFLLGLGGGALYPAA 108 (352)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHcccccccHhH
Confidence 455566677778888899999999999999999999999988776433322 24689999999999999999999999
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
..++.|+.|+++|++.+++......+|..+|+.+...+... .+|+ .+.+...+.++..++..++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-------- 174 (352)
T cd06174 109 AALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES------LGWRWLFLILAILGLLLALLLLFLL-------- 174 (352)
T ss_pred HHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH------hhHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 99999999999999999999999999999999988866432 2233 23333333333333222211
Q ss_pred CCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh---hhhccccccccc--cccchhhhHHHHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF---FYSYQFNNVNGL--MFNLRTRGLNNVFYWGAQMLGS 290 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~---~~s~~~~~~~~~--~f~~~~~~l~~~~~~i~~~i~~ 290 (479)
|+++......+.... .+....+.+... +++..+.+......+++.+++.
T Consensus 175 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 228 (352)
T cd06174 175 --------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGA 228 (352)
T ss_pred --------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 122111111111111 011111222211 3455566778888899999999
Q ss_pred HHhhhhccccccCccc-eeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHH
Q 011720 291 VGIGYVMDFSFQSLRT-RGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQ 369 (479)
Q Consensus 291 ~~~g~l~Dr~~~gRr~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 369 (479)
++.+++.|| .|||+ ....+..... +.... ... . .+........++.+++.+..+
T Consensus 229 ~~~~~~~~~--~~~~~~~~~~~~~~~~-i~~~~----~~~---------------~---~~~~~~~~~~~~~g~~~~~~~ 283 (352)
T cd06174 229 LLGGLLSDR--LGRRRLLLLIGLLLAA-LGLLL----LAL---------------A---PSLALLLVALLLLGFGLGFAF 283 (352)
T ss_pred HHHHHHHHH--HHhhhHHHHHHHHHHH-HHHHH----HHH---------------h---ccHHHHHHHHHHHHHHHhccc
Confidence 999999999 67877 5544433321 11111 100 0 123345667778888888888
Q ss_pred HHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 370 SMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 370 ~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
+....+..+.. |+++|++..++.+..++++..++..+..
T Consensus 284 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~i~g 322 (352)
T cd06174 284 PALLTLASELA-PPEARGTASGLFNTFGSLGGALGPLLAG 322 (352)
T ss_pred hhHHHHHHhhc-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999 7799999999999999999998877654
No 63
>PRK10133 L-fucose transporter; Provisional
Probab=99.78 E-value=7.2e-17 Score=166.75 Aligned_cols=302 Identities=12% Similarity=0.033 Sum_probs=180.0
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...+...+..+.++.+++++.|++.||+|||+++.++.+++.+....+.....+++++.++++|+++|+|.|...++
T Consensus 58 ~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~ 137 (438)
T PRK10133 58 LTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETA 137 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 45566777778888999999999999999999999999999998874433321224678999999999999999999999
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhcc-C------------C-cccc------cchh-HHHHHH
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHR-T------------D-AESV------NDKT-YIAFMC 194 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~-~------------~-~~~~------~~~~-~~i~~~ 194 (479)
...++.|+.++++|++.++++...+.+|..+|+.++..+.... . + ...| +|+. |.....
T Consensus 138 ~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~ 217 (438)
T PRK10133 138 ANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVA 217 (438)
T ss_pred HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887777777899999999999999998876442110 0 0 0011 1221 211111
Q ss_pred HHHHHHHHHHhc-cCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHH-HHHhhh---hhhccccccc-c-
Q 011720 195 FMSAGAALSLAI-LPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPA-AWASNF---FYSYQFNNVN-G- 267 (479)
Q Consensus 195 l~~l~~~l~~~~-~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~-~~~~~~---~~s~~~~~~~-~- 267 (479)
+..+..++..+. .|+.+.+++++ +++.+..++. .+.+++|+++..... +++... .+++. +.+. +
T Consensus 218 v~~~~~~~~~~~~~p~~~~~~~~~-----~~~~~~~~~~---~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~l~~~ 288 (438)
T PRK10133 218 IVLLVALLIMLTKFPALQSDNHSD-----AKQGSFSASL---SRLARIRHWRWAVLAQFCYVGAQTACWSYL-IRYAVEE 288 (438)
T ss_pred HHHHHHHHHHHhcCCCCCcccccc-----ccccchhhhH---HHHHhCchHHHHHHHHHHHHHHHHHHHHHH-HHHHhhh
Confidence 111111111121 22211111100 0011111222 234455554332221 111111 12232 3332 2
Q ss_pred -ccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccC
Q 011720 268 -LMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKT 346 (479)
Q Consensus 268 -~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (479)
.+.+....++....+.++.++++++.+++.|| +|||+....+..... ..+.+ ..+ .
T Consensus 289 ~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r--~g~~~~l~~~~~~~~-~~~~~----~~~----~------------ 345 (438)
T PRK10133 289 IPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR--FAPHKVLAAYALIAM-ALCLI----SAF----A------------ 345 (438)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHH-HHHHH----HHH----c------------
Confidence 24566667888888999999999999999999 678876655533221 11111 110 0
Q ss_pred CCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHH
Q 011720 347 SGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYK 394 (479)
Q Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~ 394 (479)
++. .....+.++|++.+...|..++...+.. +++.+.+.++..
T Consensus 346 --~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~--~~~~~~as~l~~ 388 (438)
T PRK10133 346 --GGH-VGLIALTLCSAFMSIQYPTIFSLGIKNL--GQDTKYGSSFIV 388 (438)
T ss_pred --CCh-HHHHHHHHHHHHHHHHHHHHHHHHHccc--chhhccchhHHh
Confidence 111 1234456788888888888887777766 233345555554
No 64
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.78 E-value=1.1e-16 Score=184.52 Aligned_cols=324 Identities=11% Similarity=0.000 Sum_probs=193.9
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhh---hHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 59 TAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAG---CSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 59 ~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig---~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
...++..++..+.+.+.++++|.++||+|||+++... .+.+.. .+.+.. ..+++++++++|+++|++.++.+++
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~--~~~~~~-~~~s~~~l~~~~~l~gi~~a~~~p~ 128 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAA--LAIYGF-HLNSVPLLFAALFLMGIHSALFGPI 128 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHH--HHHHHH-HHhhHHHHHHHHHHHHHHHHhhchH
Confidence 4566667777788899999999999999999976432 222222 111111 2368999999999999999999999
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
..+++.++.++++|++++|+..+..++|.++|+.++..+... .+|+..++..++..+..++..+..|+.+..++
T Consensus 129 ~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (1140)
T PRK06814 129 KYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS------GNFVILVALLMGIAVLGWLASLFIPKTGNAAP 202 (1140)
T ss_pred HHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc------cccHHHHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 999999999999999999999999999999999998876432 34543322222222222222233333221111
Q ss_pred CCCcccccccCCHHHHHHHHHHHh-hchHHHHHHHHHHHhhhhh---hccccccccc--cccchhhhHHHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLF-RNWKMLLLFPAAWASNFFY---SYQFNNVNGL--MFNLRTRGLNNVFYWGAQMLG 289 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~-~~~r~ll~~~~~~~~~~~~---s~~~~~~~~~--~f~~~~~~l~~~~~~i~~~i~ 289 (479)
+.+ .+....++....++.. ++|.++......+...+.. ...++.+... +.+....++.....+++.+++
T Consensus 203 -~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig 277 (1140)
T PRK06814 203 -DLK----IDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVG 277 (1140)
T ss_pred -CCe----eccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence 100 0111222233333333 4455544443333222211 1111333321 234455677778889999999
Q ss_pred HHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCc--c---c-ccCCCCCchhHHHHHHHHHh
Q 011720 290 SVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKR--L---D-FKTSGNDFAGPFVLYFSYGL 363 (479)
Q Consensus 290 ~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~-~~~~~~~~~~~~~~~~~~g~ 363 (479)
+++.|++.|++ ++++....+..++.+. .+. +.+. ......+.. . . +.. .+.+...+..++.|+
T Consensus 278 ~~~~g~l~~~~--~~~~~~~~~~~~~~~~--~~~---l~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~ 346 (1140)
T PRK06814 278 SFLASKLSEGR--ITLLYVPIGALLMGLF--GLD---LAFA--SSSVPAEPAQLKSILVFLSK--RHGWRILIDLFGLAA 346 (1140)
T ss_pred HHHHHHHhCCc--eeeeeehHHHHHHHHH--HHH---HHhc--ccccccccccccchhhhhcc--cccHHHHHHHHHHHH
Confidence 99999999773 3444444343322111 111 1010 000000000 0 0 001 122344556667788
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 364 LDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 364 ~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
+.+..++..+.++.+.. +++.|++++|+.++..+++.+++..+.
T Consensus 347 ~~~~~~~~~~~~~~~~~-p~~~~G~v~g~~~~~~~~~~~ig~~~~ 390 (1140)
T PRK06814 347 AGGLYIVPLFAALQAWA-NPAHRARVIAANNVLNAAFMVAGTIIL 390 (1140)
T ss_pred HHHHhHHHHHHHHHhhC-CcccceeeeHHHHHHHHHHHHHHHHHH
Confidence 88888887888888888 888999999999999988887776543
No 65
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.77 E-value=1.8e-16 Score=159.93 Aligned_cols=305 Identities=16% Similarity=0.108 Sum_probs=173.4
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHH-HHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTY-VLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~-~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
++...+...+.......+.+++.|.++||+|||+.+++..... .+ ...... .+++++.+++.|++.|.+.+...+.
T Consensus 31 s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~--~~~~~~-~~~~~~~l~~~~~~~g~~~~~~~p~ 107 (375)
T TIGR00899 31 RPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAAL--ACLLFA-WNRNYFLLLVLGVLLSSFASTANPQ 107 (375)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH--HHHHHH-hcchHHHHHHHHHHHHhhhhhhHHH
Confidence 3445555666666667778889999999999998776654433 33 122222 3578888999999999888777777
Q ss_pred hhhhhhcCCCccchHhH--HHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCccc
Q 011720 136 QGAIMTSYPTATRKGTY--ISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRV 212 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~--~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~ 212 (479)
...+..|..|+++|++. .+......++|.++|+.+...+.. ..+|+ .+++...+.++..++..++.||++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 108 LFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL------GFGFTVMFLTAALAFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred HHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH------hcccHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 77777888887777754 577777788999999988776532 13454 3444344344444444444554332
Q ss_pred ccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHH--HHHh-hhhhhcccccccc--ccccchhhhHHHHHHHHHHH
Q 011720 213 IRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPA--AWAS-NFFYSYQFNNVNG--LMFNLRTRGLNNVFYWGAQM 287 (479)
Q Consensus 213 ~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~--~~~~-~~~~s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~ 287 (479)
.++++ +++ ++.++ .+++|+.+..... ..+. ...+...++.+.. .+.+..+.++......+..+
T Consensus 182 ~~~~~-----~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~ 249 (375)
T TIGR00899 182 GAPGA-----LTR----LEVRG---LLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEI 249 (375)
T ss_pred Ccccc-----cCc----chhhh---hhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 11110 001 11111 2233433222111 1111 1111111122221 23344445555555556667
Q ss_pred HHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHH
Q 011720 288 LGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAM 367 (479)
Q Consensus 288 i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 367 (479)
++.++.|++.|| +|||+....+.... .+ .+.. +.. . .+.+......++.+++.+.
T Consensus 250 ~~~~~~g~l~~r--~g~~~~~~~~~~~~-~~---~~~~-~~~---------------~---~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 250 PFMLLAGYLIKR--FGKRRLMLLAALAG-VA---FYTG-LAA---------------D---NSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHhHHHHHHH--hcchhHHHHHHHHH-HH---HHHH-HHH---------------H---HHHHHHHHHHHHHHHHHHH
Confidence 788889999999 67887554433221 11 1100 100 0 1122333444556666666
Q ss_pred HHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 368 FQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 368 ~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
..+....+..+.. | ++++++.++++...++|..++..+..
T Consensus 305 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~~~g~~~~g 344 (375)
T TIGR00899 305 LAGIGMLYFQDLM-P-GRAGAATTLYTNTGRVGWIIAGSVGG 344 (375)
T ss_pred HHHHHHHHHHHhC-c-chhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666777877 4 45679999999888888888866553
No 66
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.77 E-value=1.8e-17 Score=162.35 Aligned_cols=352 Identities=18% Similarity=0.150 Sum_probs=214.6
Q ss_pred cccccchhHHHHHHHHHHhhhhh----hhh-hhhcCCCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhh
Q 011720 20 LFRYNSPLVQVSLIGLVCFCCPG----MFN-ALSGMGGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAA 94 (479)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~f~~~~----~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~i 94 (479)
.+.|+|...|+.+.-++.+.+.- .++ +.+.+..+...+....+...++++..++++-++.|.++||.+.|.-+.+
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~ 99 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehH
Confidence 45666666677766666555521 011 3444444443566677778889999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHH--h
Q 011720 95 GCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIP--F 172 (479)
Q Consensus 95 g~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~--~ 172 (479)
|.+...+ ...+ ...+++.+.+.+.-+++|+..|.-|+.....++.+.++++||+..++++...++|..+.+.+. .
T Consensus 100 gLilsai--~nil-~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la 176 (448)
T COG2271 100 GLILSAI--VNIL-FGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLA 176 (448)
T ss_pred HHHHHHH--HHHH-HhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHH
Confidence 9887665 2222 224568999999999999999999999999999999999999999999999999998887776 4
Q ss_pred hhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCccc---------ccCCCCcc-cccc-c--CCHHHHHHHHHHH
Q 011720 173 IMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRV---------IRDDGTRC-TNIK-Y--SKVSTEAIEILKL 238 (479)
Q Consensus 173 ~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~---------~r~d~~~~-~~~~-~--~~~~~~~~~~~~~ 238 (479)
.+..+ .+|+ .|+++.++.++..++.++..+.+|. .|.|..+. +.++ + .+.++.+. ...
T Consensus 177 ~~~~~------~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~--~YV 248 (448)
T COG2271 177 FFAFH------GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFV--KYV 248 (448)
T ss_pred HHHhc------cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHH--HHH
Confidence 34322 3454 3555555555544444444433221 12232211 1111 1 11122111 124
Q ss_pred hhchHHHHHHHHHHHhhhhh----hccccccc--cccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehh
Q 011720 239 FRNWKMLLLFPAAWASNFFY----SYQFNNVN--GLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGI 312 (479)
Q Consensus 239 ~~~~r~ll~~~~~~~~~~~~----s~~~~~~~--~~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~ 312 (479)
+++|.++++...-++....- .+. +.|+ ...++..+.......+=++.+.|+++.|+++||.--|||.+.-+
T Consensus 249 L~Nk~iW~la~a~vfvYivR~gi~dW~-p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~-- 325 (448)
T COG2271 249 LKNKLIWLLALANVFVYVVRYGINDWG-PLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMAL-- 325 (448)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHhhhH-HHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHH--
Confidence 57777777665444332211 111 3333 24567767777777889999999999999999963367764322
Q ss_pred hhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHH
Q 011720 313 GIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGF 392 (479)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~ 392 (479)
+.+..++.++. .+ +.. .+ .++.....+.+..|+.-.+=|...-....|.. |.+--+++.|+
T Consensus 326 i~~~~i~~~~~--~~-----w~~---------~~--~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~-pK~AaGtA~Gf 386 (448)
T COG2271 326 IFMLLITASLV--LY-----WLA---------PN--GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFV-PKKAAGTATGF 386 (448)
T ss_pred HHHHHHHHHHH--HH-----HcC---------CC--ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccc-cHhhccchhch
Confidence 22211111111 01 110 11 23445555555566655444432222233555 55555677777
Q ss_pred HHHHHHH-HHHHH
Q 011720 393 YKGVQSA-GAAVA 404 (479)
Q Consensus 393 ~~~~~~~-g~~i~ 404 (479)
...+..+ |.+.+
T Consensus 387 ~Glf~Yl~Ga~~a 399 (448)
T COG2271 387 VGLFAYLIGAALA 399 (448)
T ss_pred hhhHHHHhhHHhc
Confidence 7777766 55444
No 67
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.77 E-value=6.2e-16 Score=161.75 Aligned_cols=348 Identities=15% Similarity=0.056 Sum_probs=204.0
Q ss_pred cccchhHHHHHHHHHHhhhhhhhhh-hhcCCCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHH
Q 011720 22 RYNSPLVQVSLIGLVCFCCPGMFNA-LSGMGGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYV 100 (479)
Q Consensus 22 ~~~~~~~~~~~~~~~~f~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~ 100 (479)
..++.+..+.+..+++-+...++.. ..-+..+...++....+...+..+-..+.++++|.++||+.||+.++.+-++..
T Consensus 7 lr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~ 86 (524)
T PF05977_consen 7 LRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRA 86 (524)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Confidence 3444444555555555444433331 110000111224444455555555566778999999999999999999987654
Q ss_pred HHHHHHHhh--hccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhcc
Q 011720 101 LYAGSFLYY--NHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHR 178 (479)
Q Consensus 101 i~~~~~~~~--~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~ 178 (479)
+........ ....+.+.+++.-++.|++.++..++..+++.|+.|+++..++.++.....++..++||.++..+....
T Consensus 87 ~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~ 166 (524)
T PF05977_consen 87 LVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF 166 (524)
T ss_pred HHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 432222111 113468899999999999999999999999999999999999999999999999999998887653210
Q ss_pred CCcccccchhHHHHHHHHHHHHHHHHhccCCcccccCCCCcccccccCCHHHHHHHHHHHhh-chHHHHHHHHHHHhhhh
Q 011720 179 TDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFR-NWKMLLLFPAAWASNFF 257 (479)
Q Consensus 179 ~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~-~~r~ll~~~~~~~~~~~ 257 (479)
+..+ .+.+..+ ..+..++.+...++++..++ .+++++.+++++-++..+ +|.+.......+..+++
T Consensus 167 ----G~~~-~f~inal-sfl~~i~~l~~~~~~~~~~~-------~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~ 233 (524)
T PF05977_consen 167 ----GAAA-AFLINAL-SFLISILALLRWKPPPPPSS-------LPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLF 233 (524)
T ss_pred ----HHHH-HHHHHHH-HHHHHHHHHHHccccccccc-------cchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHh
Confidence 1112 2333222 22222222222222111110 112334455666666444 34333222211111221
Q ss_pred hhc---ccccccccc--ccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcc
Q 011720 258 YSY---QFNNVNGLM--FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLN 332 (479)
Q Consensus 258 ~s~---~~~~~~~~~--f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~ 332 (479)
.+. .++.+.... .+...-|+.....++|.++|+++.+++.+| +++++....+...... .... +.
T Consensus 234 ~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~--~~~~~lv~~~~~~~a~-~~~~----la---- 302 (524)
T PF05977_consen 234 ASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR--LSSRRLVLLASLLFAL-ALLL----LA---- 302 (524)
T ss_pred hhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cCcchhhHHHHHHHHH-HHHH----Hh----
Confidence 111 112222112 234455778889999999999999998776 4555543333322111 0000 10
Q ss_pred cCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 333 YSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
.. ++.+......++.|++....++.......+.. |.+.|+|.+++++.....+..++..+.
T Consensus 303 -----------l~---~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~-P~~~~GRv~si~~~~~~g~~~lGsll~ 363 (524)
T PF05977_consen 303 -----------LS---PSFWLALIALFLAGAAWIIANSSLNTLVQLSV-PDWVRGRVFSIYQMVFFGGMPLGSLLW 363 (524)
T ss_pred -----------cc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 11 23345556667778888777776666777777 889999999999999888888876654
No 68
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.76 E-value=1.7e-18 Score=171.08 Aligned_cols=236 Identities=12% Similarity=0.084 Sum_probs=152.0
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...++........+.+.+++.|+++||+.||+++.+|..+|.+. .+.+. .+.++|++.+.|.+.|+|.+...+.
T Consensus 65 i~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~A--v~~~~-fs~~Fwq~~l~R~~vGiGeAs~~~i 141 (493)
T KOG1330|consen 65 ISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLA--VFASG-FSNHFWQVLLCRGFVGIGEASYSPI 141 (493)
T ss_pred CCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHH--HHHHH-HHHHHHHHHHHHHHhccchhhhccc
Confidence 33444555566777888999999999999999999999999999883 33333 3567999999999999999999999
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHH-hccCCccccc
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSL-AILPPSRVIR 214 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~-~~~~~~~~~r 214 (479)
++.+++|.+|..+|++.+++|+....+|..+|..++..+..+. ..|+|. +++-.+++++..++.+ +.++|++..|
T Consensus 142 a~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~---~~Wr~a-f~~~avl~vi~~~L~~~f~~eP~rga~ 217 (493)
T KOG1330|consen 142 APSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT---FWWRWA-FRGSAVLGVIVGLLVFLFVREPERGAR 217 (493)
T ss_pred chhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc---cceEEE-EEeehHHHHHHHHHHHhhccCcccccc
Confidence 9999999999999999999999999999999988877654332 235554 3344455554444434 4444543222
Q ss_pred CCCCcccccccCCHHHHHHHHHHHhhchHHHH----HHHHHHHhhhhhhcccccccc-----ccccchhhhHHHHHHHHH
Q 011720 215 DDGTRCTNIKYSKVSTEAIEILKLFRNWKMLL----LFPAAWASNFFYSYQFNNVNG-----LMFNLRTRGLNNVFYWGA 285 (479)
Q Consensus 215 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll----~~~~~~~~~~~~s~~~~~~~~-----~~f~~~~~~l~~~~~~i~ 285 (479)
++.+.. .+..++....+|+++...++|-+.+ ..-.++-.+- +++..+.+.. .+++.++..+...+..++
T Consensus 218 ~~~~~~-~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs-~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~ 295 (493)
T KOG1330|consen 218 DEVDGE-NKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGS-LSWWAPAFIYYSYELIGFDHNATLIFGGVTCAG 295 (493)
T ss_pred cccccC-CcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccc-cchhhhhHHHHHHHHhCCccccchhhhhHHHhh
Confidence 211110 0001112223444444444332222 2212222221 2222222221 124444445566777888
Q ss_pred HHHHHHHhhhhcccc
Q 011720 286 QMLGSVGIGYVMDFS 300 (479)
Q Consensus 286 ~~i~~~~~g~l~Dr~ 300 (479)
..+|.+++|.++||.
T Consensus 296 G~lGvl~Ggiisd~~ 310 (493)
T KOG1330|consen 296 GSLGVLFGGIISDKL 310 (493)
T ss_pred chhhheehHHHHHHH
Confidence 899999999999983
No 69
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.76 E-value=7.4e-17 Score=170.58 Aligned_cols=315 Identities=13% Similarity=0.066 Sum_probs=181.5
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
+........++++++..+|+++.|+++|++|||++++++.++..++. ... +.++|++.+++.|++.|++.+...+..
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~--~~~-a~a~~~~~~~~~Rfl~G~~~~~~~~~~ 192 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFG--ILT-AFAPNYWMFLIFRFLSGFFGSGPLTVG 192 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHH--HHH-HHhCcHHHHHHHHHHHHhhccchhHHh
Confidence 34567778899999999999999999999999999999999988844 332 357999999999999999999999999
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCccc----
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRV---- 212 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~---- 212 (479)
..+++|+.+|++|+....+ ......++.+++....++.. +|+|..+. ..+...+..++ .++.||++.
T Consensus 193 ~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~------~Wr~~~~~-~~~~~~~~~~~-~~l~~Es~rwl~~ 263 (521)
T KOG0255|consen 193 FGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR------DWRWLFWI-ISIPSGLFLLL-WFLPPESPRWLLS 263 (521)
T ss_pred HhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh------hHHHHHHH-HHHHHHHHHHH-HHccCcChHHHHH
Confidence 9999999999999999999 55555666665555444431 24443332 22223322222 455555542
Q ss_pred -ccCCCCccccc-------ccCCHHHHHH-----------------HHHHHhhchHHHH--HHHHHHHhhhhhhccccc-
Q 011720 213 -IRDDGTRCTNI-------KYSKVSTEAI-----------------EILKLFRNWKMLL--LFPAAWASNFFYSYQFNN- 264 (479)
Q Consensus 213 -~r~d~~~~~~~-------~~~~~~~~~~-----------------~~~~~~~~~r~ll--~~~~~~~~~~~~s~~~~~- 264 (479)
+|.|+.....+ .+....+..+ .....++.+++.. +...+.+......|+ +.
T Consensus 264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~-gl~ 342 (521)
T KOG0255|consen 264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYY-GLS 342 (521)
T ss_pred cCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHH-hhh
Confidence 12211110000 0011100000 0111222222111 111111111101111 11
Q ss_pred cccccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccc
Q 011720 265 VNGLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDF 344 (479)
Q Consensus 265 ~~~~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (479)
++...++. ...+.....+.....+....+...|+ .|||.....+..... +.+.+. + +. . +
T Consensus 343 ~~~~~lg~-~~~~~~~~~~~~~~p~~~~~~~~~~~--~gR~~~~~~~~~~~~-~~~~~~-~---~~---~--------~- 402 (521)
T KOG0255|consen 343 LNVSGLGG-NIYLNFTLSGLVELPAYFRNGLLLPE--FGRRPPLFLSLFLAG-IGLLLF-G---WL---P--------D- 402 (521)
T ss_pred hhhhhcCc-hHHHHHHHHHHHHhhHHHHHHHHHHH--hCcHHHHHHHHHHHH-HHHHHH-H---Hh---h--------c-
Confidence 11111111 22333444555677777777888898 689987666543322 111111 1 10 0 0
Q ss_pred cCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 345 KTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
.. .......+..+..++...++.. .+.+..|++ |...|..+.+.......++..++..+.
T Consensus 403 ~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~el~-pt~~r~~~~~~~~~~~~~~~i~ap~~~ 462 (521)
T KOG0255|consen 403 DL--GGWLHWILPLLGKFFIGSAFNL-IFLYSAELI-PTVVRNTAVGAISAAARLGSILAPLFP 462 (521)
T ss_pred cc--hhHHHHHHHHHHHHHHHHHHHH-HHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1011223333334445555555 477888999 788899999999998888888887765
No 70
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.76 E-value=4.1e-16 Score=163.44 Aligned_cols=296 Identities=13% Similarity=0.083 Sum_probs=163.9
Q ss_pred Hhhhhhhhhhhcc-----chhHH-HhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCcc
Q 011720 74 VFGILGGGVYNIF-----GPRVT-LAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTAT 147 (479)
Q Consensus 74 ig~l~~g~l~d~~-----Grk~~-l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~ 147 (479)
+++++++|++||+ |||+. +.++.+...+...........++.+.+.+.|++.|++.+...+...++..|+.|++
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 5789999999999 99986 44555544442222212112356888999999999999998888899999999999
Q ss_pred chHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchh-HHHHHHHHHHHHHHHHhccCCcccccCCCCcccccccC
Q 011720 148 RKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKT-YIAFMCFMSAGAALSLAILPPSRVIRDDGTRCTNIKYS 226 (479)
Q Consensus 148 ~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~~~r~d~~~~~~~~~~ 226 (479)
+||+..++......+|.++|+.+...+..+ .++|+. |++..++..+..+..++ .||++..+++ ++ ..++
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~-----~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~-~~---~~~~ 209 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADR-----YLGWQGMYWLMAALLIPCIIATLL-APEPTDTIPV-PK---TLEQ 209 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccCHHHHHHHHHHHHHHHHHHHHh-cCCCcccccc-cc---chhh
Confidence 999999999999999999998877665321 245653 33333434443333333 3432211110 00 0001
Q ss_pred CHHHHHHHHHHHhhchHHHHHHHHHHHhhh----hhhccccccc--cccccchhhhHHHH-HHHHHHHHHHHHhhhhccc
Q 011720 227 KVSTEAIEILKLFRNWKMLLLFPAAWASNF----FYSYQFNNVN--GLMFNLRTRGLNNV-FYWGAQMLGSVGIGYVMDF 299 (479)
Q Consensus 227 ~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~----~~s~~~~~~~--~~~f~~~~~~l~~~-~~~i~~~i~~~~~g~l~Dr 299 (479)
...++++ +.+++++.+......+.... .+++. +.+. ..+++..+.++... ...++.+++.++.|++.||
T Consensus 210 ~~~~~l~---~~~~~~~~~~~ll~~~l~~~~~~~~~~~~-~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr 285 (491)
T PRK11010 210 AVVAPLR---DFFGRNNAWLILLLIVLYKLGDAFAMSLT-TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR 285 (491)
T ss_pred hHHHHHH---HHHcCcCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112222 23344443322221111111 11121 3332 23456666677653 4457889999999999999
Q ss_pred cccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHh
Q 011720 300 SFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGAL 379 (479)
Q Consensus 300 ~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i 379 (479)
+|||+....+.....+.....+. .. .. . .+........++..+..+...+..+.+..++
T Consensus 286 --~g~~~~l~i~~~l~~l~~l~~~~--l~----~~----------~---~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l 344 (491)
T PRK11010 286 --LSLFRALMIFGILQGVSNAGYWL--LS----IT----------D---KNLYSMGAAVFFENLCGGMGTAAFVALLMTL 344 (491)
T ss_pred --HhHHHHHHHHHHHHHHHHHHHHH--HH----hc----------c---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67776544433221111111110 10 00 0 1111122222222222222223345566677
Q ss_pred cCCchhhhHHHHHHHHHHHHHHHHHh
Q 011720 380 ADDSETLSRYTGFYKGVQSAGAAVAW 405 (479)
Q Consensus 380 ~~~~~~r~~~~~~~~~~~~~g~~i~~ 405 (479)
. +.+.+++..++.+...++|..+..
T Consensus 345 ~-~~~~~~t~~gl~~s~~~lg~~~~~ 369 (491)
T PRK11010 345 C-NKSFSATQFALLSALSAVGRVYVG 369 (491)
T ss_pred c-CCCCcHHHHHHHHHHHHHHHHHHH
Confidence 7 566678888888888877766543
No 71
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.76 E-value=8.5e-18 Score=165.47 Aligned_cols=331 Identities=17% Similarity=0.179 Sum_probs=191.2
Q ss_pred CCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccC-----chhhHHHHHHHHhhh
Q 011720 54 GQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHH-----DQTFAVVAGAVLGIG 128 (479)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~-----~~~~li~~R~i~G~g 128 (479)
+..++......+++.+.+..+|+++.|++.|++|||+++...+++.++.++..-.. ... -.+.+.+.|++.|+|
T Consensus 79 g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s-~~~~~~~~~m~~L~~~R~~LGiG 157 (538)
T KOG0252|consen 79 GHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLS-VGTTSPLGVMMTLCFFRFLLGIG 157 (538)
T ss_pred CcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccC-CCCCCCcchhhHHHHHHHHhhcc
Confidence 44555677778888899999999999999999999999999999988855422211 111 245789999999999
Q ss_pred hhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhh---cc-CCccccc--chhHHHHHHHHHHHHHH
Q 011720 129 AGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNY---HR-TDAESVN--DKTYIAFMCFMSAGAAL 202 (479)
Q Consensus 129 ~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~---~~-~~~~~~~--~~~~~i~~~l~~l~~~l 202 (479)
.|.-+|...++.+|.+..++||...+...+...+|...|.+++..+.. +. +..+... ...|.+...+.++.+++
T Consensus 158 IGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~ 237 (538)
T KOG0252|consen 158 IGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALL 237 (538)
T ss_pred ccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888888888888877664432 21 1011111 12444445556665554
Q ss_pred HHhc---cCCccc-----ccC------CCCcccc---c-------ccCCHHHHHHHHHHHhhch--HHHHHHHHHHH-h-
Q 011720 203 SLAI---LPPSRV-----IRD------DGTRCTN---I-------KYSKVSTEAIEILKLFRNW--KMLLLFPAAWA-S- 254 (479)
Q Consensus 203 ~~~~---~~~~~~-----~r~------d~~~~~~---~-------~~~~~~~~~~~~~~~~~~~--r~ll~~~~~~~-~- 254 (479)
.+.. .||++. .++ |..++.. + ..+..++..+...+.+.++ +.++.....++ .
T Consensus 238 ~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllD 317 (538)
T KOG0252|consen 238 VLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLD 317 (538)
T ss_pred HHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4332 244331 011 1111000 0 0001111122222233332 22222222111 1
Q ss_pred hhhhhccc--ccccc-cccc--------chhhhHHH-HHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHH
Q 011720 255 NFFYSYQF--NNVNG-LMFN--------LRTRGLNN-VFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAI 322 (479)
Q Consensus 255 ~~~~s~~~--~~~~~-~~f~--------~~~~~l~~-~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~ 322 (479)
--+|++-+ ..+.+ .++. ....+..+ +....+.+.|.++...++|+ +|||...+.|+.++.+..+.+
T Consensus 318 iafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~--iGRk~iq~~GF~~~~i~~~~~ 395 (538)
T KOG0252|consen 318 IAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI--IGRKYIQLMGFFIMTIFFFVI 395 (538)
T ss_pred hhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh--hhhHHHHHhhHHHHHHHHHHH
Confidence 11222110 11111 1111 11122222 23333444477788889999 789998888877653222111
Q ss_pred HHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHH
Q 011720 323 WGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAA 402 (479)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~ 402 (479)
..+|++. . +. .++.+.+.+..++ .+.+=++.+..+++|.+ |.+.|+..-++.....-+|+.
T Consensus 396 -------~~~y~~~------~-~~--~Gf~v~y~l~~ff--~NFGPn~ttfivpaE~F-ParvR~t~hGIsAA~GK~GAi 456 (538)
T KOG0252|consen 396 -------AGPYNQL------E-NT--IGFVVLYSLTFFF--GNFGPNATTFIVPAEIF-PARVRSTCHGISAASGKAGAI 456 (538)
T ss_pred -------cCCcccc------c-cc--CceeehHHHHHHH--HhcCCCceeEEeehhhc-hHHHhhhhhhHHHHhccchHH
Confidence 1223311 1 22 3443444443333 33344444556789999 999999999999988888888
Q ss_pred HHhh
Q 011720 403 VAWQ 406 (479)
Q Consensus 403 i~~~ 406 (479)
++..
T Consensus 457 vg~~ 460 (538)
T KOG0252|consen 457 VGAF 460 (538)
T ss_pred HHHH
Confidence 8765
No 72
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.72 E-value=1.6e-15 Score=152.32 Aligned_cols=303 Identities=9% Similarity=-0.032 Sum_probs=169.6
Q ss_pred hhhhhhhhhcc-----chhHHH-hhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccch
Q 011720 76 GILGGGVYNIF-----GPRVTL-AAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRK 149 (479)
Q Consensus 76 ~l~~g~l~d~~-----Grk~~l-~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~R 149 (479)
.++.|+++||+ |||+.+ +.+.+...+............+.+.+...+++.|++.+...++..+++.|+.|+|+|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 78999999998 899975 455555444222222111124566778888888988888888888999999999999
Q ss_pred HhHHHHHHHHHHhhhhhhhHHHhhhhhccCC--cccccchh-HHHHHHHHHHHHHHHHhccCCcccccCCCCcccccccC
Q 011720 150 GTYISLFWSIFNMGGVVGGLIPFIMNYHRTD--AESVNDKT-YIAFMCFMSAGAALSLAILPPSRVIRDDGTRCTNIKYS 226 (479)
Q Consensus 150 G~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~--~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~~~r~d~~~~~~~~~~ 226 (479)
+++.++......+|.++|+.+...+..+... ...+.|+. +++..++.++..++.++..||++..++++ + ++++
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~-~---~~~~ 193 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVP-K---PLTQ 193 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccc-h---hHHH
Confidence 9999999999999999999887655422110 01233654 33333333333333333344322111110 0 0001
Q ss_pred CHHHHHHHHHHHhhchHHHHHHHHHHHhhhh----hhccccccc-cccccchhhhHHHHHHH-HHHHHHHHHhhhhcccc
Q 011720 227 KVSTEAIEILKLFRNWKMLLLFPAAWASNFF----YSYQFNNVN-GLMFNLRTRGLNNVFYW-GAQMLGSVGIGYVMDFS 300 (479)
Q Consensus 227 ~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~----~s~~~~~~~-~~~f~~~~~~l~~~~~~-i~~~i~~~~~g~l~Dr~ 300 (479)
+.++.+++.++....++.+.+....+..... +++. +.+. ..+++..+.++.....+ ++.+++.++.+++.||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r- 271 (356)
T TIGR00901 194 AVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLT-TLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQP- 271 (356)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-
Confidence 1112222222211111243333222222221 1111 2222 23455555566555444 5778999999999999
Q ss_pred ccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhc
Q 011720 301 FQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALA 380 (479)
Q Consensus 301 ~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~ 380 (479)
+|||+....+..... +...... +.....+ . .+... +.........++.++..+..++....++.+..
T Consensus 272 -~g~~~~l~~~~~~~~-~~~~~~~----~~~~~~~---~--~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 338 (356)
T TIGR00901 272 -LNILYALLLFGIVQA-LTNAGFV----WLASNGH---H--DGITF--PHLLMLFLTITLEAVTGGLGTVAFVAFLSKLS 338 (356)
T ss_pred -hhHHHHHHHHHHHHH-HHHHHHH----HHHhcCc---c--ccccc--chHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 788877555543321 1111111 1000000 0 00001 22334455566677887778887888999999
Q ss_pred CCchhhhHHHHHHHHHHH
Q 011720 381 DDSETLSRYTGFYKGVQS 398 (479)
Q Consensus 381 ~~~~~r~~~~~~~~~~~~ 398 (479)
|+++|++.+++++..++
T Consensus 339 -p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 339 -NPKFGATQMALLSSLSA 355 (356)
T ss_pred -CCCccHHHHHHHHHHHh
Confidence 88999999998876653
No 73
>PRK10054 putative transporter; Provisional
Probab=99.72 E-value=1.9e-15 Score=154.23 Aligned_cols=306 Identities=14% Similarity=0.055 Sum_probs=179.6
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...+...++......+++++.|.++||+|||+.++++.+...+..... . .+++.+.+++.|.+.|.+.+...+.
T Consensus 40 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~g~~~~~~~~~ 116 (395)
T PRK10054 40 LSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI--P-LVNNVTLVVLFFALINCAYSVFSTV 116 (395)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH--H-HHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566677777777788889999999999999999999988766532222 2 3467888888999999888877777
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCcccccC
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
...+..|..|+++|++.+++.....++|..+|+.++..+.. .++++ .+....++..+..++..+..|+++.+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-----~g~~~-~f~~~~~~~~i~~i~~~~~~~~~~~~~~ 190 (395)
T PRK10054 117 LKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-----QSINL-PFWLAAICSAFPLVFIQIWVQRSEKAIA 190 (395)
T ss_pred HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hccCc-HHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 88888999999999999999999999999999998876532 12333 3333333344443333333332211111
Q ss_pred CCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhh----hccccccc----cccccchhhhHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFY----SYQFNNVN----GLMFNLRTRGLNNVFYWGAQM 287 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~----s~~~~~~~----~~~f~~~~~~l~~~~~~i~~~ 287 (479)
+ ++++ . ++..+.+++|+++......+...+.+ ++. +.+. ....+....++......+..+
T Consensus 191 ~-------~~~~---~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 258 (395)
T PRK10054 191 T-------ETGS---V-WSPSVLLQDKALLWFTCSGFLASFVSGAFASCI-SQYVMVVADSDFAEKVVAVVLPVNAAMVV 258 (395)
T ss_pred c-------chhh---h-hhhhhhccCceehHHHHHHHHHHHHHHHhhhhH-HHHHHHhcccchHHHHHHHHHHhhhhhee
Confidence 0 0000 1 11123445666554433333222211 111 2221 111222233444445555555
Q ss_pred HHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHH
Q 011720 288 LGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAM 367 (479)
Q Consensus 288 i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 367 (479)
......|++.|| .+||+....+..... +.... +.. . . .+.....+..+..+++...
T Consensus 259 ~~~~~~g~~~~~--~~~~~~l~~~~~~~~-~~~~~----~~~----~----------~---~~~~~~~~~~~~~~~g~~~ 314 (395)
T PRK10054 259 SLQYSVGRRLNA--ANIRPLMTAGTLCFV-IGLVG----FIF----S----------G---NSLLLWGMSAAVFTVGEII 314 (395)
T ss_pred eehhHHHHHHcc--CCchhHHHHHHHHHH-HHHHH----HHH----c----------c---hHHHHHHHHHHHHHHHHHH
Confidence 556677888998 567776555432221 11111 110 0 0 1122223344567777776
Q ss_pred HHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 368 FQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 368 ~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
..|.....+.+.. |++.|+++++..+ ...+|.+++..+.
T Consensus 315 ~~p~~~~~~~~~~-p~~~~~~~~~~~~-~~~~G~~~Gp~~~ 353 (395)
T PRK10054 315 YAPGEYMLIDHIA-PPGMKASYFSAQS-LGWLGAAINPLVS 353 (395)
T ss_pred HHhhHHHHHHHhC-CcccceehHhHHH-HHHHHHHHHHHHH
Confidence 6676667788888 7788888887654 3445666665544
No 74
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.72 E-value=1.2e-15 Score=153.12 Aligned_cols=301 Identities=13% Similarity=0.033 Sum_probs=175.3
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...+...++.+.++.+++++.|+++||+|||+.+.++.++..+... .. .+++.+.+++.|++.|+|.+...+.
T Consensus 32 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~--~~--~~~~~~~l~~~~~~~g~g~~~~~~~ 107 (355)
T TIGR00896 32 MSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGIL--IR--SAPGTALLFAGTALIGVGIAIINVL 107 (355)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHH--HH--HhccHHHHHHHHHHHHHHHHHHhcc
Confidence 3455667778888899999999999999999999999999887665322 22 2467889999999999999998877
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchh-HHHHHHHHHHHHHHHHhccCCccccc
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKT-YIAFMCFMSAGAALSLAILPPSRVIR 214 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~~~r 214 (479)
.+.++.|..| ++|++.++++.....+|..+|+.+...+..+ ....|+. +.....+..+. .....|+++.++
T Consensus 108 ~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~----~~~~w~~~f~~~~~~~~~~---~~~~~~~~~~~~ 179 (355)
T TIGR00896 108 LPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQH----SGGHWQQALAWWALPALLA---LLAWIPQVRRRV 179 (355)
T ss_pred chHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhhhHHHHHHHHHHHHHHH---HHHHhhhhcccc
Confidence 7888888875 6899999999999999999998887655321 1112442 22222222221 112223221111
Q ss_pred CCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh-hh---hccccccc-cccccchhhhHHHHHHHHHHHHH
Q 011720 215 DDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF-FY---SYQFNNVN-GLMFNLRTRGLNNVFYWGAQMLG 289 (479)
Q Consensus 215 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~-~~---s~~~~~~~-~~~f~~~~~~l~~~~~~i~~~i~ 289 (479)
+++. ..++.. ..+.+++|+.+........... ++ .+. +.+. ..+++..+.++.....+++.+++
T Consensus 180 ~~~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-p~~~~~~g~~~~~~g~~~~~~~~~~i~~ 248 (355)
T TIGR00896 180 AANQ---TTTRLT-------PVRIWRSPLAWQVTVFFGLQSGLYYSLIGWL-PAILISHGASAATAGSLLALMQLAQAAS 248 (355)
T ss_pred CCCC---CCCCCC-------CchhhcCHhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 1000 000001 1123345555443322222111 11 111 3332 23455556677777889999999
Q ss_pred HHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHH
Q 011720 290 SVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQ 369 (479)
Q Consensus 290 ~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 369 (479)
+++.|++.||.+ +||+....+...+. +.... +.+ . . .+ ... ...+++|++.+...
T Consensus 249 ~~~~g~l~dr~~-~~~~~~~~~~~~~~-~~~~~----~~~----~--------~-~~---~~~---~~~~l~g~~~g~~~ 303 (355)
T TIGR00896 249 ALLIPALARRVK-DQRGIVAVLAVLQL-VGLCG----LLF----A--------P-MH---GLW---AWALVLGLGQGGAF 303 (355)
T ss_pred HHhHHHHHhhhc-cchHHHHHHHHHHH-HHHHH----HHH----h--------h-hh---HHH---HHHHHHHHhhhhHh
Confidence 999999999932 45543333332221 11111 111 0 0 01 111 12345677777766
Q ss_pred HHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHH
Q 011720 370 SMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVA 404 (479)
Q Consensus 370 ~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~ 404 (479)
+.....+.+...++++++...++.+....++.+++
T Consensus 304 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g 338 (355)
T TIGR00896 304 PLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALG 338 (355)
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555555554355666777776665555554444
No 75
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.72 E-value=1.7e-15 Score=155.70 Aligned_cols=345 Identities=11% Similarity=0.048 Sum_probs=190.7
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccch-hHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGP-RVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWA 134 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Gr-k~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~ 134 (479)
.+....+...++...+..+++++.|.++||+|| |+.+.++.++..+. ..+.. ..++.+.+++.|++.|++.+...+
T Consensus 35 ~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~ 111 (418)
T TIGR00889 35 FSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALL--LFFAA-QVTTPAGMFPVLLANSLAYMPTIA 111 (418)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH--HHHHH-HhcCHHHHHHHHHHHHHHHccHHH
Confidence 345567777888889999999999999999965 77888777766542 22222 346788999999999998776554
Q ss_pred hhhhh----hh----cCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhc
Q 011720 135 GQGAI----MT----SYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAI 206 (479)
Q Consensus 135 ~~~~~----i~----e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~ 206 (479)
...+. +. |......|.|..|. +|..+|+++...+.. ...|..+.+..++.++..++ .+.
T Consensus 112 ~~~~l~~~~~~~~g~~~~~~~~~~r~~G~------lG~~ig~~l~g~l~~------~~~~~~f~~~~~~~~~~~~~-~~~ 178 (418)
T TIGR00889 112 LTNSISYANLPQAGLDVVTDFPPIRVMGT------IGFIAAMWAVSLLDI------ELSNIQLYITAGSSALLGVF-ALT 178 (418)
T ss_pred HHHHHHHHHHhhcCCCchhcCCCeeeehh------HHHHHHHHHHHHhcc------cchhHHHHHHHHHHHHHHHH-Hhc
Confidence 44332 22 34444556676663 566777766654421 12243344434434443333 333
Q ss_pred cCCcccccCCCCcccccccCCHHHHHH-HHHHHhhchHHHHHHHHHHHhhh----hhhcccccccc-ccc--------cc
Q 011720 207 LPPSRVIRDDGTRCTNIKYSKVSTEAI-EILKLFRNWKMLLLFPAAWASNF----FYSYQFNNVNG-LMF--------NL 272 (479)
Q Consensus 207 ~~~~~~~r~d~~~~~~~~~~~~~~~~~-~~~~~~~~~r~ll~~~~~~~~~~----~~s~~~~~~~~-~~f--------~~ 272 (479)
.||++. ++++. +.+.++..+ +..+.+++|+++.+....+..+. .+.+. +.+.. .+. ..
T Consensus 179 ~~e~~~-~~~~~------~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~ 250 (418)
T TIGR00889 179 LPDIPV-AKSTA------KMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFG-NGFLHEFGRNPEFADSFVV 250 (418)
T ss_pred CCCCCC-Ccccc------ccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhH-HHHHHHhcccccccchhhh
Confidence 444321 11110 011111111 11234566665443333332221 11121 22221 111 12
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCch
Q 011720 273 RTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFA 352 (479)
Q Consensus 273 ~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (479)
...++......+..+++.+..+++.|| +|||+....+..... +...+ +. +.+. + . ....
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr--~g~r~~l~~~~~~~~-v~~~l----~~----~~~~------~--~--~~~~ 309 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKR--FGIKKVMLLSLVAWA-LRFGF----FA----YGDP------E--Y--FGYA 309 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHH-HHHHH----HH----HcCc------c--h--hhHH
Confidence 344666667788888999999999999 689887666544321 11111 11 1100 0 0 1223
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHH-HHHHHHHHHHhhhcccCcchhH-----HHHHHHHHHH
Q 011720 353 GPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYK-GVQSAGAAVAWQVDTHKVSLLS-----QLIINWSLTT 426 (479)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~-~~~~~g~~i~~~~~~~~~~~~~-----~~~i~~~~~~ 426 (479)
..++..++.|+..+...+....++.+.+ |+++|+++.++.+ ..+++|.+++..+......... .+-..|....
T Consensus 310 ~l~l~~~l~g~~~~~~~~~~~~~i~~~~-p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 310 LLFLSMIVYGCAFDFFNISGSVFVEKEV-PVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 3444556677777777776677888999 8899999999997 5677888887666542211110 0111222222
Q ss_pred hhhhhhheeeeeEeccCCCC
Q 011720 427 VSYPLLVVLVMLAVKDDDKS 446 (479)
Q Consensus 427 ~~~~~~~~~v~~~~pet~~~ 446 (479)
+..+...+..++++||+++.
T Consensus 389 ~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHHHHHHHHhCCcccC
Confidence 23334456667778998633
No 76
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.71 E-value=4.2e-15 Score=152.30 Aligned_cols=120 Identities=17% Similarity=0.166 Sum_probs=102.1
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++...+...+..+.++.+++++.|++.||+|||+++.++.+++.+...........++++.++++|++.|+|.|...++
T Consensus 35 ~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~ 114 (410)
T TIGR00885 35 LTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETA 114 (410)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhh
Confidence 44556677788888999999999999999999999999999988774333222222467899999999999999999999
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
...++.++.|+++|++.+++.+...++|..+|+.+...+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 115 ANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred hhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999877653
No 77
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.70 E-value=3.6e-15 Score=153.51 Aligned_cols=235 Identities=14% Similarity=0.147 Sum_probs=159.9
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhh
Q 011720 59 TAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGA 138 (479)
Q Consensus 59 ~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~ 138 (479)
...+...+..+.++.++.+.++++.||+|-|+++.++.++..+.+...-.. ...+.+.+++.|+++|++.|..+++.+.
T Consensus 73 ~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~a-a~~~~~~~~~~R~lqGl~~g~~~pa~~~ 151 (466)
T KOG2532|consen 73 TEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLA-ASIGFYLLLVLRFLQGLGQGVLFPAIGS 151 (466)
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHH-HHhcchhhHHHHHHhHHHHhHHHhhhhc
Confidence 355667788888889999999999999999999999999888733332222 2345668899999999999999999999
Q ss_pred hhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccC--CcccccC
Q 011720 139 IMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILP--PSRVIRD 215 (479)
Q Consensus 139 ~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~--~~~~~r~ 215 (479)
+.+.++|++||++..++..+..++|.+++..++..+-. ..++|. .|.+..++.++..++.+++.. |+++++-
T Consensus 152 i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~-----s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~i 226 (466)
T KOG2532|consen 152 ILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCE-----SSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNI 226 (466)
T ss_pred eeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc-----cCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence 99999999999999999999999999998877665532 124453 455666666665555444432 3332211
Q ss_pred CCC---cccccccCCHHH--HHHHHHHHhhchHHHHHHHHHHHhhhh----hhcccccccc--ccccchhhhHHHHHHHH
Q 011720 216 DGT---RCTNIKYSKVST--EAIEILKLFRNWKMLLLFPAAWASNFF----YSYQFNNVNG--LMFNLRTRGLNNVFYWG 284 (479)
Q Consensus 216 d~~---~~~~~~~~~~~~--~~~~~~~~~~~~r~ll~~~~~~~~~~~----~s~~~~~~~~--~~f~~~~~~l~~~~~~i 284 (479)
.++ +.+..+.+...+ ..-...+.++++.++......+...+. ..|. ++|+. ..|+.++.|+.+....+
T Consensus 227 s~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~-PtY~~~VL~f~v~~~G~~salP~l 305 (466)
T KOG2532|consen 227 SEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYL-PTYLKEVLGFDVRETGFLSALPFL 305 (466)
T ss_pred CHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHhCCChhhhhHHHHHHHH
Confidence 100 000000000000 000122445677776665554444431 2333 66654 46788899999888899
Q ss_pred HHHHHHHHhhhhcccc
Q 011720 285 AQMLGSVGIGYVMDFS 300 (479)
Q Consensus 285 ~~~i~~~~~g~l~Dr~ 300 (479)
...+..++.|.++||.
T Consensus 306 ~~~~~k~~~g~lsD~l 321 (466)
T KOG2532|consen 306 AMAIVKFVAGQLSDRL 321 (466)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999984
No 78
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.69 E-value=1e-14 Score=147.19 Aligned_cols=145 Identities=11% Similarity=0.054 Sum_probs=117.8
Q ss_pred CChhh-hhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhh
Q 011720 56 LDPTA-ANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWA 134 (479)
Q Consensus 56 ~~~~~-~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~ 134 (479)
.++.. .+...+..+.++++..+++|.++||+|.|+.+.++.+.+.+..+.... +++...+.+.|++.|++.|..+
T Consensus 58 lT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f---a~Sl~~L~i~R~llGvaEA~~~- 133 (511)
T TIGR00806 58 FTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL---GTSVWHMQLMEVFYSVTMAARI- 133 (511)
T ss_pred CCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH-
Confidence 44444 777888999999999999999999999999999999999885555443 4579999999999999999999
Q ss_pred hhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhH----HHHHHHHHHHHHHHHhccCCc
Q 011720 135 GQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTY----IAFMCFMSAGAALSLAILPPS 210 (479)
Q Consensus 135 ~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~----~i~~~l~~l~~~l~~~~~~~~ 210 (479)
+...++..+.|+++|++++|++.+...+|.++|+.++..+. .++|+.| .+-...++++.++++++.+|+
T Consensus 134 A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-------s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~ 206 (511)
T TIGR00806 134 AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-------TLGWISYSTLNIISLVFMTFSVFLALFLKRPK 206 (511)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCchhHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 88999999999999999999999999999999998877642 1445533 344455666667777765444
Q ss_pred c
Q 011720 211 R 211 (479)
Q Consensus 211 ~ 211 (479)
+
T Consensus 207 ~ 207 (511)
T TIGR00806 207 R 207 (511)
T ss_pred h
Confidence 3
No 79
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.68 E-value=9.3e-16 Score=164.82 Aligned_cols=118 Identities=14% Similarity=0.106 Sum_probs=96.8
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhc--------------------------
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNH-------------------------- 111 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~-------------------------- 111 (479)
....+...+....+.+++.++.+++.||+|||+.+.+|.+++.+....+..+..
T Consensus 67 s~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~ 146 (633)
T TIGR00805 67 TSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCM 146 (633)
T ss_pred CCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccccccccccc
Confidence 334555667788888999999999999999999999999988874443322210
Q ss_pred ----------------------cCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhH
Q 011720 112 ----------------------HHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGL 169 (479)
Q Consensus 112 ----------------------~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~ 169 (479)
...+.+++++|+++|+|.+..++...+++.|+.|+++|+++++++.....+|+.+|+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~l 226 (633)
T TIGR00805 147 ENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYL 226 (633)
T ss_pred CCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHH
Confidence 0024567899999999999999999999999999999999999999999999999998
Q ss_pred HHhhhh
Q 011720 170 IPFIMN 175 (479)
Q Consensus 170 i~~~i~ 175 (479)
++..+.
T Consensus 227 lgg~l~ 232 (633)
T TIGR00805 227 LGSFCL 232 (633)
T ss_pred HHHHHH
Confidence 877654
No 80
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.67 E-value=5.8e-14 Score=143.14 Aligned_cols=302 Identities=15% Similarity=0.082 Sum_probs=152.2
Q ss_pred hhhhhhHHHHH-HHHHHHhhhhhhhhhhccchhHHHhhhh-HHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 58 PTAANNANTAL-YTTFSVFGILGGGVYNIFGPRVTLAAGC-STYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 58 ~~~~~~~~~~~-~~~~aig~l~~g~l~d~~Grk~~l~ig~-~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
+...+...+.. .....++.+.+++ .||+|||+.+++.+ +...+ +..+. ..+++++.+++.+.+.|...+...+.
T Consensus 50 ~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~--~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~ 125 (393)
T PRK15011 50 PAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVL--ACTLF-AWNRNYFVLLFVGVFLSSFGSTANPQ 125 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHH--HHHHH-HHhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 44444443333 3345556666677 99999998865544 33323 12222 23567777655544444334455666
Q ss_pred hhhhhhcCCCccch--HhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchh-HHHHHHHHHHHHHHHHhccCCccc
Q 011720 136 QGAIMTSYPTATRK--GTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKT-YIAFMCFMSAGAALSLAILPPSRV 212 (479)
Q Consensus 136 ~~~~i~e~~~~~~R--G~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~~ 212 (479)
...+..|..++++| +...++.....++|.++|+.++..+.. ..+|+. |++..++.++..++..+..||++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 199 (393)
T PRK15011 126 MFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM------GFSFTVMYLSAAVAFIVCGVMVWLFLPSMRK 199 (393)
T ss_pred HHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH------hcChHHHHHHHHHHHHHHHHHHHhhcCccCC
Confidence 66777776665545 455678888889999999998876642 245653 333333344433333444454332
Q ss_pred ccCCCCcccccccCCHHHHHHHHHHHhhchHHHHH---HHHHHHhhhhhhcccccccc--ccccchhhhHHHHHHHHHHH
Q 011720 213 IRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLL---FPAAWASNFFYSYQFNNVNG--LMFNLRTRGLNNVFYWGAQM 287 (479)
Q Consensus 213 ~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~---~~~~~~~~~~~s~~~~~~~~--~~f~~~~~~l~~~~~~i~~~ 287 (479)
+++++. .+.+ +.+ + +++..+.. ..........+....+.+.. .+++..+.++......++.+
T Consensus 200 ~~~~~~----~~~~----~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i 266 (393)
T PRK15011 200 ELPLAT----GTLE----APR---R--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEI 266 (393)
T ss_pred CCcccc----cccc----ccc---c--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 111100 0000 001 0 11111111 11111111111111233332 23344455665555566778
Q ss_pred HHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHH
Q 011720 288 LGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAM 367 (479)
Q Consensus 288 i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 367 (479)
++.++.|++.|| +|||+....+..... +. ... .. +. .+........+..++..+.
T Consensus 267 ~~~~~~G~l~dr--~g~~~~~~~~~~~~~-~~-~~~---~~----~~--------------~~~~~~l~~~~l~~~~~g~ 321 (393)
T PRK15011 267 PTMLIAGYFAKR--LGKRFLMRVAAVAGV-CF-YAG---ML----MA--------------HSPAILLGLQLLNAIYIGI 321 (393)
T ss_pred HHHHHHHHHHHH--hChHHHHHHHHHHHH-HH-HHH---HH----HH--------------hhHHHHHHHHHHHHHHHHH
Confidence 889999999999 678875444332211 11 110 10 01 0111112222223333333
Q ss_pred HHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 368 FQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 368 ~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
..+....+..|.. | ++|+++.++++...++|..++..+..
T Consensus 322 ~~~~~~~~~~~~~-p-~~~g~~~~~~~~~~~lg~~~g~~l~G 361 (393)
T PRK15011 322 LGGIGMLYFQDLM-P-GQAGSATTLYTNTSRVGWIIAGSLAG 361 (393)
T ss_pred HHHHHHHHHHHhC-C-CCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 3333445567877 4 56889999988888888888877664
No 81
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.66 E-value=1.3e-14 Score=149.78 Aligned_cols=321 Identities=10% Similarity=0.019 Sum_probs=181.4
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhc----cchhH-HHhhhhHHHHHHHHHHHhhh-cc--CchhhHHHHHHHHhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNI----FGPRV-TLAAGCSTYVLYAGSFLYYN-HH--HDQTFAVVAGAVLGIG 128 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~----~Grk~-~l~ig~~~~~i~~~~~~~~~-~~--~~~~~li~~R~i~G~g 128 (479)
++...+...++.....++..++.|+++|| +|||+ .++++...+.+....+.... .. .....+++.+++.+++
T Consensus 33 s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (437)
T TIGR00792 33 SAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLF 112 (437)
T ss_pred CHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHH
Confidence 45566677777778889999999999998 67744 56667666655322222211 01 1145667888999999
Q ss_pred hhhhhhhhhhhhhcCC-CccchHhHHHHHHHHHHhhhhhhhHHHhhhhh-ccCCcccccchh-HHHHHHHHHHHHHHHHh
Q 011720 129 AGLLWAGQGAIMTSYP-TATRKGTYISLFWSIFNMGGVVGGLIPFIMNY-HRTDAESVNDKT-YIAFMCFMSAGAALSLA 205 (479)
Q Consensus 129 ~g~~~~~~~~~i~e~~-~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~-~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~ 205 (479)
.+...+...++..|.. ++++|++..++......+|.++++.+...+.. ........+|+. +.+..++..+..++..+
T Consensus 113 ~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 192 (437)
T TIGR00792 113 YSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFF 192 (437)
T ss_pred HHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHc
Confidence 8887766677788876 57899999999888888888777665443321 110011234543 23333333333333334
Q ss_pred ccCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhh---cccccccccccc-chhhhHHHHH
Q 011720 206 ILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFYS---YQFNNVNGLMFN-LRTRGLNNVF 281 (479)
Q Consensus 206 ~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~s---~~~~~~~~~~f~-~~~~~l~~~~ 281 (479)
..||++..++++ .+++.+..+.+| +.+++|+++......+.....+. .....+..+.++ ....+.....
T Consensus 193 ~~~e~~~~~~~~----~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (437)
T TIGR00792 193 GTKERYSEIPKN----IEKKLSLKQIFK---ALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSI 265 (437)
T ss_pred CCEecCCCCCcc----cccCCCHHHHHH---HHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHH
Confidence 444432111110 011123333332 23456665544433332222111 111111121122 2334455556
Q ss_pred HHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHH
Q 011720 282 YWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSY 361 (479)
Q Consensus 282 ~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (479)
..++.+++.++.+++.|| +|||+....+..... +.... +.+ . . .+........++.
T Consensus 266 ~~i~~ii~~~~~~~l~~r--~g~~~~~~~~~~~~~-~~~~~----~~~----~-----------~--~~~~~~~~~~~~~ 321 (437)
T TIGR00792 266 AIVAGLIGVLLFPRLVKK--FGRKILFAGGILLMV-LGYLI----FFF----A-----------G--SNLPLILVLIILA 321 (437)
T ss_pred HHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHH-HHHHH----HHH----c-----------c--hhHHHHHHHHHHH
Confidence 688899999999999999 678887666543321 11111 111 0 0 1122334455567
Q ss_pred HhhHHHHHHHHHHHHHHhcC------CchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 362 GLLDAMFQSMVYWVIGALAD------DSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 362 g~~~~~~~~~~~~~~~~i~~------~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
+++.+..++..+.++++..+ +.+.++.+.|++++.+.+|.+++..+.
T Consensus 322 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~ 374 (437)
T TIGR00792 322 GFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLV 374 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777778777651 245678889999999988888875543
No 82
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.66 E-value=8.4e-15 Score=150.60 Aligned_cols=318 Identities=15% Similarity=0.037 Sum_probs=159.8
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchh-hHHHHHHHHhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQT-FAVVAGAVLGIGAGLLWA 134 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~-~li~~R~i~G~g~g~~~~ 134 (479)
.++...+...++......+++++.|.++||+|||+.+.++..+..+..........++... ..+.+.++.|+..+..+.
T Consensus 43 ~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (420)
T PRK09528 43 LSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFL 122 (420)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 3456677778888888999999999999999999999887665544222211110000000 112223333333333222
Q ss_pred hhhhhhhcCCC--ccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCccc
Q 011720 135 GQGAIMTSYPT--ATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRV 212 (479)
Q Consensus 135 ~~~~~i~e~~~--~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~ 212 (479)
.....+.++.+ +++||+.+|......++|..+|+.+...+.. .++++ .+++..++.++..++.++.+||++.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-----~~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~ 196 (420)
T PRK09528 123 AGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-----INPQI-NFWLGSGSALILLVLLFFAKPDAPS 196 (420)
T ss_pred cchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-----cCchH-hHHHHHHHHHHHHHHHhcccccccc
Confidence 22222222222 3456778888888888999999988765532 12322 3333333333333333444443322
Q ss_pred ccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhh---hcccccccc-----ccccchhhhHHHHHHHH
Q 011720 213 IRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFY---SYQFNNVNG-----LMFNLRTRGLNNVFYWG 284 (479)
Q Consensus 213 ~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~---s~~~~~~~~-----~~f~~~~~~l~~~~~~i 284 (479)
++++.++ +.++++ +.+.++..+.+++|+++.+..........+ ...++.+.. ...+....++......+
T Consensus 197 ~~~~~~~-~~~~~~--~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 273 (420)
T PRK09528 197 TAKVANA-LGANAS--AVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVF 273 (420)
T ss_pred hhhhccc-hhcccc--cccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Confidence 1110000 000011 112333444556665433222111111111 001122211 12233344566666777
Q ss_pred HHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhh
Q 011720 285 AQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLL 364 (479)
Q Consensus 285 ~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 364 (479)
...++.++.|++.|| +|||+....+..... +.... +. + . .+........++.++.
T Consensus 274 ~~~~~~~~~g~l~dr--~g~~~~~~~~~~l~~-~~~~l----~~----~-----------~---~~~~~~~~~~~l~g~~ 328 (420)
T PRK09528 274 LEALIMFFAPFIINR--IGAKNALLLAGTIMA-VRIIG----SG----F-----------A---TGPLEVSILKLLHAFE 328 (420)
T ss_pred HHHHHHHHHHHHHHH--hCcchhhHHHHHHHH-HHHHH----HH----h-----------c---ccHHHHHHHHHHHHHH
Confidence 888999999999999 678876544433211 11111 11 1 1 1122334445566666
Q ss_pred HHHHHHHHHHHHHHhcCCchhhhHHHHH-HHHHHHHHHHHHhhhc
Q 011720 365 DAMFQSMVYWVIGALADDSETLSRYTGF-YKGVQSAGAAVAWQVD 408 (479)
Q Consensus 365 ~~~~~~~~~~~~~~i~~~~~~r~~~~~~-~~~~~~~g~~i~~~~~ 408 (479)
.+...+....++.+.. |++.++...+. +++...+|..++..+.
T Consensus 329 ~~~~~~~~~~~~~~~~-~~~~~a~~~~~~~~~~~~lg~~ig~~~~ 372 (420)
T PRK09528 329 VPFLLVGVFKYITLNF-DVRLSATIYLVGFQFAKQLGAVFLSTLA 372 (420)
T ss_pred HHHHHHHHHHHHHHHc-CccceeeeeeehHHHHHHHHHHHHHHHH
Confidence 6665555566778888 67777766544 4555566666654443
No 83
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.63 E-value=2.6e-14 Score=140.54 Aligned_cols=243 Identities=13% Similarity=-0.010 Sum_probs=147.0
Q ss_pred CCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhh
Q 011720 54 GQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLW 133 (479)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~ 133 (479)
...+++...+..++-.+..++.-++-|++.||+|.|+..+++.++..+=..........+++|++++.++++|++.+.+.
T Consensus 44 ~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFa 123 (417)
T COG2223 44 FGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFA 123 (417)
T ss_pred cCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceeh
Confidence 33455666666777777778888999999999999999999988766522222222223556799999999999998764
Q ss_pred hhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCccc
Q 011720 134 AGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRV 212 (479)
Q Consensus 134 ~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~ 212 (479)
.....++++.|||++|.++|++. .-|+|..+...+...+.... +...|+ ...+..+..++..+...+.....+.
T Consensus 124 -v~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~---g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~ 198 (417)
T COG2223 124 -VGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF---GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPE 198 (417)
T ss_pred -cccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChh
Confidence 55678899999999999999998 66777655444443332110 000132 2233344444444444444433222
Q ss_pred ccCCCCcccccccCCHH-HHHHHHHHHhhchHHHHHHHHHHHh---hhhhhcccccccc--ccccchhhhHHHHHHHHHH
Q 011720 213 IRDDGTRCTNIKYSKVS-TEAIEILKLFRNWKMLLLFPAAWAS---NFFYSYQFNNVNG--LMFNLRTRGLNNVFYWGAQ 286 (479)
Q Consensus 213 ~r~d~~~~~~~~~~~~~-~~~~~~~~~~~~~r~ll~~~~~~~~---~~~~s~~~~~~~~--~~f~~~~~~l~~~~~~i~~ 286 (479)
.|++. ++.+ .++| ..+++|+.+.+..+...+ ...++..++.+.. ++.+..+.+..........
T Consensus 199 ~r~~~--------~~~~~~~~~---~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g 267 (417)
T COG2223 199 HRASV--------KPQLPAQLK---AVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIG 267 (417)
T ss_pred hhccc--------cccchhHHH---HHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHH
Confidence 12211 1111 2233 334566666655443322 1222333354443 3345556667777777788
Q ss_pred HHHHHHhhhhccccccCccceeeehhhh
Q 011720 287 MLGSVGIGYVMDFSFQSLRTRGLVGIGI 314 (479)
Q Consensus 287 ~i~~~~~g~l~Dr~~~gRr~~~~~g~~~ 314 (479)
.+..+++|+++|| +|.++..+.....
T Consensus 268 ~l~Rp~GG~LsDR--~Gg~rv~~~~f~~ 293 (417)
T COG2223 268 ALARPLGGWLSDR--IGGRRVTLAVFVG 293 (417)
T ss_pred HHHHhccchhhhh--ccchhHHHHHHHH
Confidence 8899999999999 5555544444433
No 84
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.62 E-value=2.5e-13 Score=142.10 Aligned_cols=322 Identities=13% Similarity=0.058 Sum_probs=180.5
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhc-cchhHHHhhhhHHHHHHHHHHHhhhccCch-hhHHHHHHHHhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNI-FGPRVTLAAGCSTYVLYAGSFLYYNHHHDQ-TFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~-~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~-~~li~~R~i~G~g~g~~~~~ 135 (479)
........+.+.....+..+++|+++|| +|||+++++|.+++.+....+.. +.+. ..++++|+++|+|.|...+.
T Consensus 49 ~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~---~~~~~~ll~~~~~l~~ig~g~~~~~ 125 (489)
T PRK10207 49 QEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGM---SLLKPDLIFIALGTIAVGNGLFKAN 125 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHH---hccchhHHHHHHHHHHhccccccCC
Confidence 3334444555555666677899999999 99999999999998884333222 3333 34568999999999999988
Q ss_pred hhhhhhcCCCcc--chHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCccc
Q 011720 136 QGAIMTSYPTAT--RKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRV 212 (479)
Q Consensus 136 ~~~~i~e~~~~~--~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~ 212 (479)
..+++.|..|++ +|++.++++....++|..+|+.++..+..+ .+|+ .|.+..+ ..+..++.+.+.++...
T Consensus 126 ~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~------~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~ 198 (489)
T PRK10207 126 PASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK------FGYSVTYNLCGA-GLIIALLVYFACRGMVK 198 (489)
T ss_pred HHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh------hChHHHHHHHHH-HHHHHHHHHHHcchhhc
Confidence 889999998877 458899999999999999999988776432 2343 3333222 22222222222221100
Q ss_pred c---cCCCCcccc--------------------cccCCH-----------------HHHHHHHHHHhhchHHHHHHHHHH
Q 011720 213 I---RDDGTRCTN--------------------IKYSKV-----------------STEAIEILKLFRNWKMLLLFPAAW 252 (479)
Q Consensus 213 ~---r~d~~~~~~--------------------~~~~~~-----------------~~~~~~~~~~~~~~r~ll~~~~~~ 252 (479)
+ +.++.+.+. ...... .++.+ .-+.. ++|.+....++.
T Consensus 199 ~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~-~~~~~-r~r~~~~~~l~~ 276 (489)
T PRK10207 199 DIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFK-LDKTG-RNKMFVAFVLML 276 (489)
T ss_pred ccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCHHH-HHHHHHHHHHHH
Confidence 0 000000000 000000 00000 00111 234333333221
Q ss_pred Hhh--h-hhh---ccccccccc-------cccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccce-------eeehh
Q 011720 253 ASN--F-FYS---YQFNNVNGL-------MFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTR-------GLVGI 312 (479)
Q Consensus 253 ~~~--~-~~s---~~~~~~~~~-------~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~-------~~~g~ 312 (479)
..- + .+. ..++.+.+. ++.. ..........+..++.+++.+++.|| .+||+. ..+|.
T Consensus 277 ~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i-~~~~~~~~n~~~iii~~pl~~~l~~r--l~~r~~~~~~~~k~~~G~ 353 (489)
T PRK10207 277 EAVVFYILYAQMPTSLNFFAINNVHHEILGFSI-NPVSFQALNPFWVVVASPILAGIYTH--LGSKGKDLSMPMKFTLGM 353 (489)
T ss_pred HHHHHHHHHHHcccHHHHHHHHhccccccceEE-CHHHHHhHhHHHHHHHHHHHHHHHHH--HhhCCCCCCcHHHHHHHH
Confidence 111 1 011 001111110 1111 11222233455666777888899998 556652 33343
Q ss_pred hhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHH
Q 011720 313 GIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGF 392 (479)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~ 392 (479)
.... ++++.... . ...+.+. + .. .+.+.....+++.+++.....+..+....+.. |++.++.+.|+
T Consensus 354 ~l~~-~~~~~~~~-~--~~~~~~~------~-~~--~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~a-P~~~~g~~~g~ 419 (489)
T PRK10207 354 FLCS-LGFLTAAA-A--GMWFADA------Q-GL--TSPWFIVLVYLFQSLGELFISALGLAMIAALV-PQHLMGFILGM 419 (489)
T ss_pred HHHH-HHHHHHHH-H--HHhhcCC------C-Cc--cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC-hHHHHHHHHHH
Confidence 3321 11111100 0 0001111 1 11 33445667888999999999998888888888 88999999999
Q ss_pred HHHHHHHHHHHHhhhc
Q 011720 393 YKGVQSAGAAVAWQVD 408 (479)
Q Consensus 393 ~~~~~~~g~~i~~~~~ 408 (479)
+...+++|+.++-.++
T Consensus 420 ~~l~~~ig~~lg~~l~ 435 (489)
T PRK10207 420 WFLTQAAAFLLGGYVA 435 (489)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999987765
No 85
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.62 E-value=3.1e-13 Score=141.51 Aligned_cols=137 Identities=18% Similarity=0.216 Sum_probs=97.9
Q ss_pred HHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCC
Q 011720 66 TALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPT 145 (479)
Q Consensus 66 ~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~ 145 (479)
....+..++++++.|.++|.+|||+.++++.++.++ +..++. .++|...++++-.+.|+|.|..... ...++|..|
T Consensus 85 ~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vv--G~Iv~a-tA~~~~~~iag~~l~GvgaG~~~~~-~~~isEl~p 160 (599)
T PF06609_consen 85 TAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVV--GSIVCA-TAQNMNTFIAGMVLYGVGAGVQELA-ALAISELVP 160 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHh--HHHHhh-cCCcHHHHHHHHHHHHHhhHHHHHH-HHHHHHhcc
Confidence 345566788889999999999999999999999887 555554 5899999999999999999886544 445789999
Q ss_pred ccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHH-HHhccCCcc
Q 011720 146 ATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAAL-SLAILPPSR 211 (479)
Q Consensus 146 ~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l-~~~~~~~~~ 211 (479)
.|.|+...++..........+|+.++..+.. ..+|+|..| +.+++..+++++ .+|..||++
T Consensus 161 ~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~----~~~WRw~~~-~~~i~~~i~~vl~~~fY~PP~~ 222 (599)
T PF06609_consen 161 NKWRGLGLAIASIPFIITTWISPLIAQLFAA----HSGWRWIFY-IFIIWSGIALVLIFFFYFPPPR 222 (599)
T ss_pred cchhhhHhHHHHHHHHhhhcccHHHHHHhcc----CCCcchHHH-HHHHHHHHHHHHHHHHhCCCch
Confidence 9999887776655544444456666554432 245777544 334455555433 445566653
No 86
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.62 E-value=1.5e-13 Score=140.08 Aligned_cols=314 Identities=12% Similarity=0.005 Sum_probs=169.1
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhcc-----CchhhHHHHHHHHhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHH-----HDQTFAVVAGAVLGIGAGL 131 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~-----~~~~~li~~R~i~G~g~g~ 131 (479)
++...+...++......++.++.|+++||+|||+.++.+.+.+.+........... +....++++|++.|++.+.
T Consensus 36 s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 115 (396)
T TIGR00882 36 SKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSA 115 (396)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45566777888888899999999999999999999998776655422222111001 1233457778889988888
Q ss_pred hhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCc
Q 011720 132 LWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPS 210 (479)
Q Consensus 132 ~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~ 210 (479)
..+....+..|.. +++++..|......++|..+|+.++..+.. .+|+ .+++...+..+..++.++..|++
T Consensus 116 ~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-------~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 116 GAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-------IDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred chhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-------cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 7777777766643 234556677777778899999988764421 2343 23333333443333333334433
Q ss_pred ccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhh---ccccccccc-----cccchhhhHHHHHH
Q 011720 211 RVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFYS---YQFNNVNGL-----MFNLRTRGLNNVFY 282 (479)
Q Consensus 211 ~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~s---~~~~~~~~~-----~f~~~~~~l~~~~~ 282 (479)
+.++++++..+ .+++ +++.++..+.+++|+++......+.....+. ..++.+... ..+....++.....
T Consensus 187 ~~~~~~~~~~~-~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~ 263 (396)
T TIGR00882 187 PSSATVANALG-ANAS--AFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMG 263 (396)
T ss_pred chhhhhhcccc-cccC--CCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHH
Confidence 22111000000 0000 1112344455667765544333222211111 111222221 12223345555566
Q ss_pred HHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHH
Q 011720 283 WGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYG 362 (479)
Q Consensus 283 ~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 362 (479)
.+...++....+++.|| +|||+....+..... +.... +. +. .+........++.+
T Consensus 264 ~i~~~~~~~~~g~l~~r--~g~~~~l~~~~~l~~-l~~~~----~~----~~--------------~~~~~~~~~~~l~g 318 (396)
T TIGR00882 264 ELLNALIMFCAPLIINR--IGAKNALLIAGTIMS-VRIIG----SS----FA--------------TTALEVVILKMLHA 318 (396)
T ss_pred HHHHHHHHHHHHHHHHH--hccchhHHHHHHHHH-HHHHH----HH----hc--------------CChHHHHHHHHHHH
Confidence 77788888889999999 678886655543221 11111 10 00 11122344455666
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhHHHHH-HHHHHHHHHHHHhhhc
Q 011720 363 LLDAMFQSMVYWVIGALADDSETLSRYTGF-YKGVQSAGAAVAWQVD 408 (479)
Q Consensus 363 ~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~-~~~~~~~g~~i~~~~~ 408 (479)
+..+..+.....+..+.. +.+.++++.+. +++...+|..+...+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~-~~~~~at~~~~~~~~~~~lg~~~~~~l~ 364 (396)
T TIGR00882 319 FEVPFLLVGCFKYITSQF-DVRLSATIYLIGFQFAKQLAMIFLSTLA 364 (396)
T ss_pred HHHHHHHHHHHHHHHHhC-CcceEEEeehHHHHHHHHHHHHHHHHhH
Confidence 665554444444555555 55666665555 5566777777775443
No 87
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.61 E-value=3.5e-13 Score=136.83 Aligned_cols=303 Identities=11% Similarity=-0.005 Sum_probs=180.5
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhH----HHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRV----TLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGL 131 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~----~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~ 131 (479)
.+....+...++......+++++.++++||+|||. .+.++..++.+ . +.. .+++.+.+++.|++.|.+.+.
T Consensus 36 ~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~---~-~~~-~~~~~~~l~~~~~l~~~~~~~ 110 (382)
T TIGR00902 36 LGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA---A-FSA-GAHNAWLLFIAIGLFALFFSA 110 (382)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH---H-HHH-hhhhHHHHHHHHHHHHHHHcc
Confidence 34666777788888888999999999999999843 33333332222 1 111 346799999999999999888
Q ss_pred hhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchh-HHHHHHHHHHHHHHHHhccCCc
Q 011720 132 LWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKT-YIAFMCFMSAGAALSLAILPPS 210 (479)
Q Consensus 132 ~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~ 210 (479)
..+...++..+. +++|++..|......++|.++|+.+...+..+ ++|+. +.+...+ .+..++.+.++|+.
T Consensus 111 ~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~------~g~~~~f~~~~~~-~~~~~~~~~~~~~~ 181 (382)
T TIGR00902 111 GMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM------FDEQNILAILTAG-LAFMLIGFLIKPTI 181 (382)
T ss_pred chhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH------cChhHHHHHHHHH-HHHHHHHHHcCCCC
Confidence 777777776553 57899999999999999999999987766432 34442 2222222 22122222333221
Q ss_pred ccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh----hhhccccccc-cccccchhhhHHHHHHHHH
Q 011720 211 RVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF----FYSYQFNNVN-GLMFNLRTRGLNNVFYWGA 285 (479)
Q Consensus 211 ~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~----~~s~~~~~~~-~~~f~~~~~~l~~~~~~i~ 285 (479)
+.++++ ++ ++++ +.++..+.+++|+++......+..+. ++++. +.+. ..+.+....++......++
T Consensus 182 ~~~~~~-~~---~~~~----~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~l~~~g~s~~~~g~l~~~~~~~ 252 (382)
T TIGR00902 182 PPKDAI-PE---DESQ----GDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFS-AIYWQAAGISASATGLLWGIGVLA 252 (382)
T ss_pred CCCccc-cc---cccc----cchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCCHhHHHHHHHHHHHH
Confidence 111111 00 0011 11223355677776554443332221 22322 3332 2344555667766678888
Q ss_pred HHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhH
Q 011720 286 QMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLD 365 (479)
Q Consensus 286 ~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 365 (479)
++++..+.+++.|| +|+|+....+.... ..-|.. +. + . ++.+......++.|+..
T Consensus 253 ~i~~~~~~~~l~~r--~g~~~~l~~~~~~~----~~~~~~-~~----~------------~--~~~~~~~~~q~l~g~~~ 307 (382)
T TIGR00902 253 EIIIFAFSNKLFQN--CSARDLLLISAIAC----VGRWAI-IG----A------------I--EAFPLIFLLQILHCGTF 307 (382)
T ss_pred HHHHHHHhHHHHhh--CCHHHHHHHHHHHH----HHHHHH-HH----h------------H--hhHHHHHHHHHHHHHHH
Confidence 89999999999999 67877655443322 111111 11 0 1 23345566677788877
Q ss_pred HHHHHHHHHHHHHhcCCchhhhHHHHHHHH-HHHHHHHHHhhhc
Q 011720 366 AMFQSMVYWVIGALADDSETLSRYTGFYKG-VQSAGAAVAWQVD 408 (479)
Q Consensus 366 ~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~-~~~~g~~i~~~~~ 408 (479)
+...+....++.+. |+++++++.++++. ...+|..++..+.
T Consensus 308 ~~~~~~~~~~i~~~--~~~~~~~~q~~~~~~~~g~g~~~g~~~~ 349 (382)
T TIGR00902 308 AVCHLAAMRYIAAQ--PGSEIAKLQALYNALAMGGLIAIFTAFA 349 (382)
T ss_pred HHHHHHHHHHHHhC--CHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666667654 56777888888763 3456666665554
No 88
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.61 E-value=5.2e-13 Score=136.54 Aligned_cols=224 Identities=15% Similarity=0.060 Sum_probs=129.2
Q ss_pred HHhhhhhhhhhhcc-----chhH-HHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCc
Q 011720 73 SVFGILGGGVYNIF-----GPRV-TLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTA 146 (479)
Q Consensus 73 aig~l~~g~l~d~~-----Grk~-~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~ 146 (479)
.+..+++|+++||+ |||+ .+.++.++..+............+.+.+++..++.++..+...++..+++.|+.|+
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~ 125 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP 125 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 46779999999999 8876 56666666544333322221124577788888888888888888889999999999
Q ss_pred cchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchh-HHHHHHHHHHHHHHHHhccCCcccccCCCCccccccc
Q 011720 147 TRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKT-YIAFMCFMSAGAALSLAILPPSRVIRDDGTRCTNIKY 225 (479)
Q Consensus 147 ~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~~~r~d~~~~~~~~~ 225 (479)
++|+++.++......+|.++|+.+...+... .++|+. +++..++..+..+. .+..||++. ++++.+ +.+
T Consensus 126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~-----~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~~-~~~~~~---~~~ 195 (402)
T PRK11902 126 EERGAGAAVKVLGYRLAMLVSGGLALWLADR-----VLGWGNTYLLMAGLMLAGALT-TLWAPEPEV-PARPPR---SLG 195 (402)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc-----ccCHHHHHHHHHHHHHHHHHH-HHhcCCCcc-cccccc---hhH
Confidence 9999999999999999999998877655321 135653 33333333332222 233343221 110000 000
Q ss_pred CCHHHHHHHHHHHhhchHHHHHHHHHHHhh----hhhhccccccc--cccccchhhhHHHHHHH-HHHHHHHHHhhhhcc
Q 011720 226 SKVSTEAIEILKLFRNWKMLLLFPAAWASN----FFYSYQFNNVN--GLMFNLRTRGLNNVFYW-GAQMLGSVGIGYVMD 298 (479)
Q Consensus 226 ~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~----~~~s~~~~~~~--~~~f~~~~~~l~~~~~~-i~~~i~~~~~g~l~D 298 (479)
++.. ++..+.+++|+++......+... ..+++. ..+. ..+++..+.++.....+ ++.+++.++.+++.|
T Consensus 196 ~~~~---~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~ 271 (402)
T PRK11902 196 EAVV---GPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLS-TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMV 271 (402)
T ss_pred HHHH---HHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHH-HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 1111 22223445555433322211111 111111 1111 12345555666554444 457899999999999
Q ss_pred ccccCccceeeehh
Q 011720 299 FSFQSLRTRGLVGI 312 (479)
Q Consensus 299 r~~~gRr~~~~~g~ 312 (479)
| +|||+....+.
T Consensus 272 r--~g~~~~l~~~~ 283 (402)
T PRK11902 272 R--LGLYRSLMLFG 283 (402)
T ss_pred H--HhHHHHHHHHH
Confidence 9 67777554443
No 89
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=99.60 E-value=7e-15 Score=128.23 Aligned_cols=119 Identities=29% Similarity=0.571 Sum_probs=110.8
Q ss_pred CCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhh
Q 011720 55 QLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWA 134 (479)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~ 134 (479)
..+++.+..++++.|..++++++++|++.+++|.|+++++|.+.|.+|.++++.+ +.+.++.+.++.|+|.+..|+
T Consensus 33 ~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~----~~~~l~~~s~l~G~~~a~lW~ 108 (156)
T PF05978_consen 33 SISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP----NSYTLYPASALLGFGAALLWT 108 (156)
T ss_pred cccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHHhhhhHHhhH
Confidence 3456789999999999999999999999999999999999999999999998765 588999999999999999999
Q ss_pred hhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhc
Q 011720 135 GQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYH 177 (479)
Q Consensus 135 ~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~ 177 (479)
+++.++++++++++|+|..+++|...+.+.++|+++.+.+...
T Consensus 109 aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~~ 151 (156)
T PF05978_consen 109 AQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQG 151 (156)
T ss_pred hhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999887543
No 90
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.60 E-value=8.5e-14 Score=134.49 Aligned_cols=113 Identities=20% Similarity=0.157 Sum_probs=92.5
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
.++..-+.+.....++++.+|.++||+|||+++.++.+...+ +++..+.+.|+..++++|++.|+.-|-.. ..-++
T Consensus 69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~---s~ll~~~S~~F~afv~aR~l~Gi~kgnl~-v~rAi 144 (451)
T KOG2615|consen 69 YAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVAL---SYLLWALSRNFAAFVLARFLGGIFKGNLS-VIRAI 144 (451)
T ss_pred hhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhhhccCchH-HHHHH
Confidence 444445556666788889999999999999999999987665 32222246788778888999999999875 45689
Q ss_pred hhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhh
Q 011720 140 MTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNY 176 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~ 176 (479)
++|+.++|+|++.++.....+.+|.++||.|+.++..
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 9999999999999999999999999999999987754
No 91
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.59 E-value=3.6e-13 Score=136.77 Aligned_cols=302 Identities=11% Similarity=-0.029 Sum_probs=171.0
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchh----HHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPR----VTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLL 132 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk----~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~ 132 (479)
++...+...++......+++++.|+++||+||| +.+.++..+..+ .. . ..+++.+.+++.|++.|++.+..
T Consensus 37 s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~---~~-~-~~~~~~~~l~i~~~l~g~~~~~~ 111 (382)
T PRK11128 37 TPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV---AF-W-FGAHSFWLLFVAIGLFNLFFSPL 111 (382)
T ss_pred CHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH---HH-H-HhcccHHHHHHHHHHHHHHHccc
Confidence 466677778888888889999999999999983 333333332211 11 1 12477999999999999999888
Q ss_pred hhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchh-HHHHHHHHHHHHHHHHhccCCcc
Q 011720 133 WAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKT-YIAFMCFMSAGAALSLAILPPSR 211 (479)
Q Consensus 133 ~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~ 211 (479)
++...++..++ +++|++..+......++|..+|+.++..+..+ ++|+. +++..+...+. ++..++.|+++
T Consensus 112 ~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~------~g~~~~f~~~~~~~~~~-~~~~~~~~~~~ 182 (382)
T PRK11128 112 VPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW------FGEQAILWILTAGVASM-LLGQLLRPTIM 182 (382)
T ss_pred ccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH------cChhHHHHHHHHHHHHH-HHHHHccCCCC
Confidence 88777776665 45688888888888899999999998866422 34543 33222222222 22223333221
Q ss_pred cccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh----hhhccccccc-cccccchhhhHHHHHHHHHH
Q 011720 212 VIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF----FYSYQFNNVN-GLMFNLRTRGLNNVFYWGAQ 286 (479)
Q Consensus 212 ~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~----~~s~~~~~~~-~~~f~~~~~~l~~~~~~i~~ 286 (479)
. + ++++. + .++.. ++..+.+++|+++......+..+. .+++. +.+. ..+.+..+.++......++.
T Consensus 183 ~-~-~~~~~--~-~~~~~---~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~g~s~~~~g~~~~~~~~~~ 253 (382)
T PRK11128 183 P-Q-GESRQ--Q-ESAGW---PAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFS-AIYWQAAGYSASTIGYLWSLGVVAE 253 (382)
T ss_pred C-c-ccccc--c-ccccc---chHHHHHcChhHHHHHHHHHHHHHHhHhHHHHH-HHHHHHCCCCHhHHHHHHHHHHHHH
Confidence 1 1 11000 0 00001 122344566766554433232221 11222 2222 23345555666666677888
Q ss_pred HHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHH
Q 011720 287 MLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDA 366 (479)
Q Consensus 287 ~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 366 (479)
++..++.+++.|| +++|+....+..... +.... +. + . .+.+......++.|+..+
T Consensus 254 ~~~~~~~g~l~~r--~~~~~~l~~~~~~~~-~~~~~----~~----~-----------~---~~~~~~~~~~~l~g~~~~ 308 (382)
T PRK11128 254 VLIFAFSNRLFRR--WSARDLLLLSAICGV-VRWGL----MG----S-----------T---TALPWLIVIQILHCGTFT 308 (382)
T ss_pred HHHHHHHHHHHHH--CCHHHHHHHHHHHHH-HHHHH----HH----h-----------h---hhHHHHHHHHHHHHHHHH
Confidence 8888899999999 678876554433221 11111 10 0 1 122334445666777766
Q ss_pred HHHHHHHHHHHHhcCCchhhhHHHHHHHHH-HHHHHHHHhhhc
Q 011720 367 MFQSMVYWVIGALADDSETLSRYTGFYKGV-QSAGAAVAWQVD 408 (479)
Q Consensus 367 ~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~-~~~g~~i~~~~~ 408 (479)
..++....+..+.. ++++++..+.+... +.+|..++..+.
T Consensus 309 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~ig~~i~ 349 (382)
T PRK11128 309 VCHLAAMRYIAARP--GSEVIRLQALYSALAMGGSIAIMTVLS 349 (382)
T ss_pred HHHHHHHHHHHHCC--HhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665555666643 45567777777633 344445554443
No 92
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.59 E-value=1.6e-12 Score=135.65 Aligned_cols=117 Identities=14% Similarity=0.156 Sum_probs=96.9
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhc-cchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNI-FGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWA 134 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~-~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~ 134 (479)
.++...+...+.......++++++|+++|| +|||+++.++.+++.+... ... .+++.+.++++|++.|+|.|...+
T Consensus 45 ~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~--~~~-~~~~~~~~~~~~~l~g~g~g~~~~ 121 (475)
T TIGR00924 45 FSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHF--MLA-MSIYPDLIFYGLGTIAVGSGLFKA 121 (475)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHH--HHH-hcccHhHHHHHHHHHHhccccccC
Confidence 345566667777788888999999999999 8999999999998776332 222 345678889999999999999888
Q ss_pred hhhhhhhcCCCccc---hHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 135 GQGAIMTSYPTATR---KGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 135 ~~~~~i~e~~~~~~---RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
...++++|..|+++ |++.+++++...++|..+|+.+...+.
T Consensus 122 ~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~ 165 (475)
T TIGR00924 122 NPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIA 165 (475)
T ss_pred CHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHH
Confidence 88899999887654 899999999999999999999887664
No 93
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.59 E-value=1.9e-14 Score=139.73 Aligned_cols=306 Identities=18% Similarity=0.224 Sum_probs=192.8
Q ss_pred hhhhHHHHHHHHHHHh----hhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVF----GILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig----~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
..+...+++++..++. +++.|++.||+|+|..+++|..+...-++.+ +...++++++++|.++|+|.++.+++
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilF---afg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILF---AFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHH---HHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 4555677777777665 5789999999999999999998766532222 24578999999999999999999999
Q ss_pred hhhhhhcCCCc-cchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccc-hhHHHHHHHHHHHHHHHHhccCCcccc
Q 011720 136 QGAIMTSYPTA-TRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVND-KTYIAFMCFMSAGAALSLAILPPSRVI 213 (479)
Q Consensus 136 ~~~~i~e~~~~-~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~-~~~~i~~~l~~l~~~l~~~~~~~~~~~ 213 (479)
..+++++..|+ ++||+.+|+...+..+|.++||-++..+ |.. .+. .-|++..++.++-..+.++..+|++.+
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGil-Ye~-----~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGIL-YEF-----AGKSAPFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccch-Hhh-----cCCcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence 99999987764 5689999999999999999999998765 431 233 346666666666677777777775432
Q ss_pred cCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhcccccc---cccccc-c-hhhhHHHHHHHHHHHH
Q 011720 214 RDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFYSYQFNNV---NGLMFN-L-RTRGLNNVFYWGAQML 288 (479)
Q Consensus 214 r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~s~~~~~~---~~~~f~-~-~~~~l~~~~~~i~~~i 288 (479)
.+ .. ++ -+..|+.+++|.+++.......++...++.-+++ ....+. . ...++..+...+...+
T Consensus 254 ~~-~~----~~-------~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~i 321 (464)
T KOG3764|consen 254 PD-ST----EQ-------GTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAI 321 (464)
T ss_pred cc-cc----cc-------CccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhc
Confidence 11 00 01 1235677788888887766666665444432322 111121 1 2457777778888999
Q ss_pred HHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHH
Q 011720 289 GSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMF 368 (479)
Q Consensus 289 ~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 368 (479)
++.+.|.+.||+.=.|. +.++..+.+..... ...++.+ .+. .-+.-.+.+.+..+..|+..
T Consensus 322 g~~lfg~la~k~~~~~w---l~~~~gl~~~G~~~------~~iP~~~-------~~~---~L~vp~~~l~~~i~~~dasl 382 (464)
T KOG3764|consen 322 GTNLFGKLADKYPHLRW---LLSLGGLATVGVSS------GPIPFAT-------SIA---QLWVPNFGLGFGIGLADASL 382 (464)
T ss_pred cCchHHHHHHhcCchhH---HHHHHHHHHHHHHh------chhHhhh-------hHH---HHhhhhHHHHHHHHHHHHHH
Confidence 99999999999432242 22222221111111 1111111 111 11111233344445555555
Q ss_pred HHHHHHHHHHhcCCchhhh---HHHHHHHHHHHHHHHHHhhhcccC
Q 011720 369 QSMVYWVIGALADDSETLS---RYTGFYKGVQSAGAAVAWQVDTHK 411 (479)
Q Consensus 369 ~~~~~~~~~~i~~~~~~r~---~~~~~~~~~~~~g~~i~~~~~~~~ 411 (479)
.| ..+.+. |.++.. .+ +....+...+.++++.++|..
T Consensus 383 ~P----~l~~lv-d~rh~s~~~vY-GsVyaIad~a~sla~a~GP~~ 422 (464)
T KOG3764|consen 383 IP----TLGYLV-DPRHVSGFNVY-GSVYAIADAAFSLAYAIGPTF 422 (464)
T ss_pred hh----hhHHhc-chhhcccccee-eeHHHHHHHHHHHhhhccccc
Confidence 44 455666 555543 33 334445667788888888754
No 94
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.56 E-value=2.1e-12 Score=135.68 Aligned_cols=102 Identities=15% Similarity=0.219 Sum_probs=79.8
Q ss_pred HHHhhhhhhhhhhc-cchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccc--
Q 011720 72 FSVFGILGGGVYNI-FGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATR-- 148 (479)
Q Consensus 72 ~aig~l~~g~l~d~-~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~-- 148 (479)
....++++|+++|| +|||+++.++.+++.+. ..++....++.+.++++|++.|+|.|...+...+++.|+.|+++
T Consensus 70 ~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig--~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~ 147 (500)
T PRK09584 70 VYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIG--YALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR 147 (500)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh
Confidence 34445789999999 59999999999888763 23322112345677889999999999988888889999887543
Q ss_pred hHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 149 KGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 149 RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
|++.+++++...++|..+|+.+...+.
T Consensus 148 ~~~~~~~~~~~~~iG~~~gp~i~g~l~ 174 (500)
T PRK09584 148 LDGAFTMYYMSINIGSFFSMLATPWLA 174 (500)
T ss_pred hhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 556889999999999999999987764
No 95
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.51 E-value=9.2e-13 Score=137.37 Aligned_cols=315 Identities=18% Similarity=0.139 Sum_probs=193.4
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhH-HHHHHHHhhhhhhhhhhhhhh
Q 011720 61 ANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFA-VVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 61 ~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~l-i~~R~i~G~g~g~~~~~~~~~ 139 (479)
.....++......+.+++++.+.||+|.|.+.++|.++..+ +++...+++++|++ +...++.|+|.|+.+..+.++
T Consensus 83 ~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~---g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paivi 159 (509)
T KOG2504|consen 83 IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL---GLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVI 159 (509)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH---HHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhh
Confidence 55666777777778889999999999999999999998776 43333356788775 668999999999999888888
Q ss_pred hhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCcccc------
Q 011720 140 MTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVI------ 213 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~------ 213 (479)
+..++ +++|+.++|+-.+...+|.++=+.+.-.+... -+|++. .+++..+.+-..+.....+|..+..
T Consensus 160 v~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~----~G~r~~-~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~ 233 (509)
T KOG2504|consen 160 LGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSK----YGWRGA-LLIFGGISLNVLVAGALLRPLSPPKKPNEEK 233 (509)
T ss_pred hhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHH----hCcHHH-HHHHHHHHHHHHHHHHHcCCCCcCCCchhhh
Confidence 88765 78899999999887777765544443333211 123332 2333333333334455666622110
Q ss_pred -----------------cC-----CCCcc----c---cc-ccCCHH--HH-HHHH---HHHhhchHHHHHHHHHHHhhh-
Q 011720 214 -----------------RD-----DGTRC----T---NI-KYSKVS--TE-AIEI---LKLFRNWKMLLLFPAAWASNF- 256 (479)
Q Consensus 214 -----------------r~-----d~~~~----~---~~-~~~~~~--~~-~~~~---~~~~~~~r~ll~~~~~~~~~~- 256 (479)
++ .+... . .+ .++... .+ .... ++.+++|.++++..-..+..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g 313 (509)
T KOG2504|consen 234 DLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLG 313 (509)
T ss_pred hhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHH
Confidence 00 00000 0 00 000000 11 1111 355667665554433222222
Q ss_pred -hhh-ccccccc-cccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhccc
Q 011720 257 -FYS-YQFNNVN-GLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNY 333 (479)
Q Consensus 257 -~~s-~~~~~~~-~~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 333 (479)
... ..++.+. ..+++..+.+......++..+++.++.|++.|+.++.++.....+.....+.. ++ .+
T Consensus 314 ~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~--~~-------~p- 383 (509)
T KOG2504|consen 314 FNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLAR--LF-------LP- 383 (509)
T ss_pred HHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHH--HH-------HH-
Confidence 111 1112222 23456666777777889999999999999999964323332222222211110 11 10
Q ss_pred CCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 334 SHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
.. ..+.......+++|+..+.+......++.++. +.++...++|+...+++++..++--+.
T Consensus 384 -----------~~--~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~-g~~~l~~a~Gl~l~~~gi~~l~gpPia 444 (509)
T KOG2504|consen 384 -----------FA--TTYVGLIVFSILFGFCVGSFSSLTPVILVDLV-GLEKLSNAYGLLLLFQGIGALVGPPIA 444 (509)
T ss_pred -----------Hh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChhhcchHHHHHHHHhHHHHHcCcccc
Confidence 11 34567788889999999999997777888999 788889999999988888877775544
No 96
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.51 E-value=6.1e-13 Score=127.79 Aligned_cols=312 Identities=13% Similarity=0.105 Sum_probs=189.0
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
...+.....+.++-+++..+|.++|++|||+...+..++-.+ .+.+. ..++|+..+.+.|.+.|+|.|. .+...++
T Consensus 114 q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v--~~~is-~~spnf~~L~~f~~l~~~g~gg-~pv~~~~ 189 (528)
T KOG0253|consen 114 QAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGV--FGVIS-GASPNFASLCVFRALWGFGVGG-LPVDSAI 189 (528)
T ss_pred hhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHH--HHHhh-cCCCCeehhhHHHHHHhccCCC-ccHhHHH
Confidence 344456677888999999999999999999999988876554 23332 2578999999999999999998 5666777
Q ss_pred hhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCccc-----cc
Q 011720 140 MTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRV-----IR 214 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~-----~r 214 (479)
-.|.-|..+|+..+-.. ..+.+|.+....+..+...+ -+|+|..+.....+++. +. ..+..||++. .+
T Consensus 190 yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~----~gwr~~l~~~~~pl~~~-a~-f~~w~~ESpRf~~~~G~ 262 (528)
T KOG0253|consen 190 YLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN----FGWRYLLFTSSTPLMFA-AR-FLVWVYESPRFYLAKGD 262 (528)
T ss_pred HHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHhHHHHH-HH-HHhhcccCcchhhhcCC
Confidence 78999999999988777 88899999999999877532 12444433332222222 22 2344566642 11
Q ss_pred C-------------CCCccc-----------ccccCC--------HHHHHH-HHHHHh---hchHHHHHHHHHHHhhh-h
Q 011720 215 D-------------DGTRCT-----------NIKYSK--------VSTEAI-EILKLF---RNWKMLLLFPAAWASNF-F 257 (479)
Q Consensus 215 ~-------------d~~~~~-----------~~~~~~--------~~~~~~-~~~~~~---~~~r~ll~~~~~~~~~~-~ 257 (479)
+ .+.+.. .+++++ ..+|-+ ++..++ .||+.+++....+...+ +
T Consensus 263 ~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsy 342 (528)
T KOG0253|consen 263 DYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSY 342 (528)
T ss_pred hHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHH
Confidence 1 111000 000000 000100 111111 24455554444443333 1
Q ss_pred hhccc-cc--------------cccccccc-------hhhhH-HHHHHHHHHHHHHHHhhhhccccccCccceeeehhhh
Q 011720 258 YSYQF-NN--------------VNGLMFNL-------RTRGL-NNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGI 314 (479)
Q Consensus 258 ~s~~~-~~--------------~~~~~f~~-------~~~~l-~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~ 314 (479)
|+.++ .+ .+++.... ...-+ -.+......+-|.++.+.+.|| +|||+.+-...+.
T Consensus 343 yg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iver--lGRKkTMal~l~~ 420 (528)
T KOG0253|consen 343 YGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVER--LGRKKTMALSLIL 420 (528)
T ss_pred HHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHH--hcchhHHHHHHHH
Confidence 11110 00 00000000 01112 1344567788999999999999 8899854433322
Q ss_pred hHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHH
Q 011720 315 VALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYK 394 (479)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~ 394 (479)
..+..+.+. . . . ...+....+|..-.+.++++|. .|.|.+|++ |...|+.+.|...
T Consensus 421 f~iflfll~----------~--------c-~---~rn~~tvllf~arafisg~fqv-aYvYtPEVy-PTavRatgvGtcS 476 (528)
T KOG0253|consen 421 FGIFLFLLT----------T--------C-K---TRNAYTVLLFTARAFISGAFQV-AYVYTPEVY-PTAVRATGVGTCS 476 (528)
T ss_pred HHHHHHHHH----------H--------h-c---CcchhHHHHHHHHHHHhchheE-EEEecCccc-chhhhhcchhhhh
Confidence 211111111 0 0 1 2234556677777788888877 899999999 8999999999999
Q ss_pred HHHHHHHHHHhhhc
Q 011720 395 GVQSAGAAVAWQVD 408 (479)
Q Consensus 395 ~~~~~g~~i~~~~~ 408 (479)
...-+|..++.++.
T Consensus 477 smaRIggI~~p~iA 490 (528)
T KOG0253|consen 477 SMARIGGIFSPVIA 490 (528)
T ss_pred hHHhhhhhhhhHHH
Confidence 99999988887765
No 97
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.49 E-value=1.5e-11 Score=128.23 Aligned_cols=323 Identities=10% Similarity=-0.010 Sum_probs=176.9
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccc-----hhHHHhhhhHHHHHHHHHHHhhhccCchh-hHHHHHHHHhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFG-----PRVTLAAGCSTYVLYAGSFLYYNHHHDQT-FAVVAGAVLGIGAGL 131 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~G-----rk~~l~ig~~~~~i~~~~~~~~~~~~~~~-~li~~R~i~G~g~g~ 131 (479)
+...+...++..+...+-.+ +|+++|+++ ||+.++++.++... ..+......++.. ...+..++.+++.+.
T Consensus 60 ~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~--~~~~~l~~~~~~~~~~~~~~~l~~~~~a~ 136 (468)
T TIGR00788 60 GARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSA--ILYGLLPGKVSSAKVAAAFIFLAALAKAL 136 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHH--HHHHhcccccchHHHHHHHHHHHHHHHHH
Confidence 34444445566666666555 999999998 88888888766521 1211111123433 344589999999999
Q ss_pred hhhhhhhhhhcCCCccchHh---HHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhcc
Q 011720 132 LWAGQGAIMTSYPTATRKGT---YISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAIL 207 (479)
Q Consensus 132 ~~~~~~~~i~e~~~~~~RG~---~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~ 207 (479)
.-++.-+++.|..+ ++++. ..++.+....+|.++|+.++..+... .+|+ .+.+...+..+..+. .++.
T Consensus 137 ~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~------~~~~~~f~~~a~l~ll~~~~-~~~~ 208 (468)
T TIGR00788 137 YDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK------TLTRILFLITAALLLLQLFV-SNLS 208 (468)
T ss_pred HHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh------cCcchHHHHHHHHHHHHHHH-HHhc
Confidence 88888899999887 44443 34455555668999999888765421 3343 343444444444332 3334
Q ss_pred CCcc-cccCCCCccc----ccccC----CHHHHHHHHHHHhhchHHHHHHHHHHH--hhhhhhccccc--c--ccccccc
Q 011720 208 PPSR-VIRDDGTRCT----NIKYS----KVSTEAIEILKLFRNWKMLLLFPAAWA--SNFFYSYQFNN--V--NGLMFNL 272 (479)
Q Consensus 208 ~~~~-~~r~d~~~~~----~~~~~----~~~~~~~~~~~~~~~~r~ll~~~~~~~--~~~~~s~~~~~--~--~~~~f~~ 272 (479)
+|++ ..+....+.+ ..... ..++.+++.++.+++|+++......+. ... .+...+. + ...+++.
T Consensus 209 ~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~-~~~~~~~f~~~~~~lG~s~ 287 (468)
T TIGR00788 209 KERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANL-PGASGSVFCATTQCLPGGP 287 (468)
T ss_pred ccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhc-CCCCceeEEEEcccCCCCc
Confidence 4432 1111000000 00000 122334556666666766543222222 111 0110000 1 1235677
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCch
Q 011720 273 RTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFA 352 (479)
Q Consensus 273 ~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (479)
...++.....+++.+++....+++.+| ++.|+...++........... ......+.. .... +...
T Consensus 288 ~~~G~~~~~~~v~~i~g~~~~~~~~~~--~~~r~~l~~~~~l~~~~~~~~----~~l~~~~~~-------~~gi--~~~~ 352 (468)
T TIGR00788 288 SFSGMSKVVGNLGSLCGVGGYDRFLKT--FPYRLLFGVTTLLYTLSSLFD----LILVKRWNL-------AFGI--SDEV 352 (468)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhh--CCHHHHHHHHHHHHHHHHhCc----eeeeecccc-------ccCC--CCee
Confidence 778888888889999999999998876 677776555543321111000 000011110 0000 1111
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 353 GPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
.+....++-++..+........++.+.. |++.+++.++++..++++|..++..++
T Consensus 353 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~egt~~al~~s~~~lg~~v~~~~g 407 (468)
T TIGR00788 353 FVLGDSIIAEVLAQLKFMPFLVLLARLC-PSGCESSVFALLASILHLGSSVSGFLG 407 (468)
T ss_pred eeeehhHHHHHHHHHHHccHHHHHHHhC-CCCceehHHHHHHHHHHHHHHHHHHHH
Confidence 1222233344444444444566788888 788899999999999999999988754
No 98
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=99.49 E-value=7e-14 Score=132.10 Aligned_cols=313 Identities=18% Similarity=0.227 Sum_probs=200.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcCCCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHH
Q 011720 28 VQVSLIGLVCFCCPGMFNALSGMGGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFL 107 (479)
Q Consensus 28 ~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~ 107 (479)
.++.+++....+....|...++++.+.+ .+++..+.+..|.....++++.+.+..++|.||+|.++...|..|.+..+
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~~vn--~~lg~~sl~~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl 106 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQTSVN--YDLGTVSLGALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANL 106 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHh--cCcccchhhhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Confidence 3567777443334455666666655433 25666778889999999999999999999999999999999998877765
Q ss_pred hhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCC--ccch---------HhHHHHHHHHHHhhhhhhhHHHhhhh-
Q 011720 108 YYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPT--ATRK---------GTYISLFWSIFNMGGVVGGLIPFIMN- 175 (479)
Q Consensus 108 ~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~--~~~R---------G~~~g~~~~~~~~G~~iG~~i~~~i~- 175 (479)
.+ .+..++.+....|+|++..|.+.++|+++..+ .++| .+..|.|+.+++.+..+|+.++..+.
T Consensus 107 ~p----r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~ 182 (390)
T KOG3097|consen 107 EP----RYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMT 182 (390)
T ss_pred ch----hHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 54 58889999999999999999999999998865 4556 57899999999999999987766432
Q ss_pred --hcc-----CC----c--------c---cccc---h------hHHHHHHHHHHHHHHHHhccCCcccccCCCCcccccc
Q 011720 176 --YHR-----TD----A--------E---SVND---K------TYIAFMCFMSAGAALSLAILPPSRVIRDDGTRCTNIK 224 (479)
Q Consensus 176 --~~~-----~~----~--------~---~~~~---~------~~~i~~~l~~l~~~l~~~~~~~~~~~r~d~~~~~~~~ 224 (479)
.+. ++ . + .... + .=.++....++..++..+++.+-+ |..+++ ..
T Consensus 183 ~~~~~~~~~sn~t~~~~CG~~f~~~g~~a~~nlt~p~~~~~lvls~i~L~c~via~~~~~~~~~~l~--r~~~~r---~~ 257 (390)
T KOG3097|consen 183 LFLHGALSGSNLTFSVECGANFCGSGDKAEGNLTLPPSYVILVLSLIFLPCMVIAVLIMLFFLGALK--RYGEKR---LA 257 (390)
T ss_pred HHhhccccCccceeeeecccccCCccccccCCccCCCCCceEEeeHHHHHHHHHHHHHHHHHHHHHh--hhhhhh---hh
Confidence 111 00 0 0 0000 0 012334444444444444432211 110000 00
Q ss_pred cCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccccccc----cccccchhhhHHHHHHHHHHHHHHHHhhhhcccc
Q 011720 225 YSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFYSYQFNNVN----GLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFS 300 (479)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~s~~~~~~~----~~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~ 300 (479)
+.+..+-+...++.++++|+.+++|+..++++...+.-..+. .........+....+++++..+.+.+.|.+..+
T Consensus 258 ~~~~l~i~~l~~~~l~~~r~~llvP~tif~GleqaF~~~~fTk~~V~c~~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~- 336 (390)
T KOG3097|consen 258 SVSGLNIFQLTFKHLRDIRLRLLVPLTIFSGLEQAFLCADFTKAYVACALGVSRIGFAMACFGVGDAVASSLFGLLGKW- 336 (390)
T ss_pred cccccchHHHHHHHhcCcceeeeehhhhhhHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 111222345567788899999999999998875444312211 122345567788889999988888889999887
Q ss_pred ccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHH
Q 011720 301 FQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMV 372 (479)
Q Consensus 301 ~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 372 (479)
+||-+....+........... +. ++.. | + .+ +.......+||.+|+.|++++
T Consensus 337 -~gr~~~~v~gavv~l~li~~~----~~----w~~~--~---~-----~~-~i~y~~aalwgv~d~vw~t~i 388 (390)
T KOG3097|consen 337 -IGRPPLLVLGAVVHLLLITIL----FF----WAPN--P---Q-----DS-WIFYVAAALWGVGDAVWKTQI 388 (390)
T ss_pred -cCCccHHHHHHHHHHHHHHHH----Hh----cccC--C---C-----Cc-eEEEeehhhcCccHHHHHhhc
Confidence 788887666654432111111 11 1111 1 1 11 112334456999999999864
No 99
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.47 E-value=4.2e-11 Score=124.25 Aligned_cols=323 Identities=15% Similarity=0.114 Sum_probs=180.6
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHH-HHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCST-YVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGA 138 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~-~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~ 138 (479)
.....+++..+..++-.++.|.++|+-|+||-++..... ..+.++.+... ..++.+...+.-++.-++.+...+.-.+
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v-~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFV-SPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566777777888889999999999987766665543 33333333322 1233433344444444555555566678
Q ss_pred hhhcCCCccch--------------------------HhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHH
Q 011720 139 IMTSYPTATRK--------------------------GTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAF 192 (479)
Q Consensus 139 ~i~e~~~~~~R--------------------------G~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~ 192 (479)
++-|+++++++ ++..+.-+..-++|.++.-+++..+........+..+..-..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 88899998888 9999999998899998888777765433211100111111111
Q ss_pred HH----HHHHHHHHHHhccCCcccccCCCCcccccccCCHHHHHHHHHHHh---h-chHHHHHHHH-HHHh-hhh--hhc
Q 011720 193 MC----FMSAGAALSLAILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLF---R-NWKMLLLFPA-AWAS-NFF--YSY 260 (479)
Q Consensus 193 ~~----l~~l~~~l~~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~---~-~~r~ll~~~~-~~~~-~~~--~s~ 260 (479)
.. ..+..... ++..|+++..+.... .+......+|+.++.+ + .|.+...... +++. ++. .+.
T Consensus 230 ~~~a~ww~vfsiP~-~~~~~~~~~~~~~~~-----~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~ 303 (477)
T PF11700_consen 230 LIVALWWLVFSIPL-FLWLPDRPGPRPLPS-----GSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISF 303 (477)
T ss_pred HHHHHHHHHHHHHH-HHhCCCCCCCCCCCc-----chhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11222222 333444332111000 0111222333333332 2 2333222211 2221 110 000
Q ss_pred ccccccc--ccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCcc--ceeeehhhhhHHHHHHHHHhHhhhhcccCCC
Q 011720 261 QFNNVNG--LMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLR--TRGLVGIGIVALFGTAIWGGGLASQLNYSHD 336 (479)
Q Consensus 261 ~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (479)
. ..+.. .+++..+.....+...+.+++|+++.|++.|| +|.| +.++.+.....++ .+++. +.+ .++
T Consensus 304 ~-~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r--~g~k~~~~l~~~l~~~~~i--~~~g~-~G~---~~~- 373 (477)
T PF11700_consen 304 A-GIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR--FGPKTKRTLLISLILWIII--PLYGL-FGF---WPS- 373 (477)
T ss_pred H-HHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCchhHHHHHHHHHHHHH--HHHHH-HHh---hhc-
Confidence 0 11111 23454455566778899999999999999999 4555 5444443332111 12211 111 110
Q ss_pred CCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 337 DPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
..+. ...+...++.+++|+..+..|+...++.+++. |+++.++.+|++....-..+.++..+.
T Consensus 374 ----~~g~----~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~Li-P~g~e~efFgly~i~gk~ss~lGPll~ 436 (477)
T PF11700_consen 374 ----FFGL----KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLI-PPGREAEFFGLYAITGKASSWLGPLLF 436 (477)
T ss_pred ----ccCc----ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhC-CCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 0111 12344667778899999999999999999999 788889999999999998888887654
No 100
>PRK09669 putative symporter YagG; Provisional
Probab=99.47 E-value=9.8e-12 Score=128.85 Aligned_cols=315 Identities=10% Similarity=-0.038 Sum_probs=171.0
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhc----cchh-HHHhhhhHHHHHHHHHHHhh-hc--cCchhhHHHHHHHHhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNI----FGPR-VTLAAGCSTYVLYAGSFLYY-NH--HHDQTFAVVAGAVLGIG 128 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~----~Grk-~~l~ig~~~~~i~~~~~~~~-~~--~~~~~~li~~R~i~G~g 128 (479)
++...+....+.-...++..++.|.++|| +||| +-++.+.+.+.+........ +. ......+++..++.+.+
T Consensus 43 s~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~ 122 (444)
T PRK09669 43 SAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLV 122 (444)
T ss_pred CHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHH
Confidence 45566666777777788999999999999 7774 55556666555432222221 10 11234566677777777
Q ss_pred hhhhhhhhhhhhhcCC-CccchHhHHHHHHHHHHhhhhhhhHHHhhhhh-ccCCcccccchh-HHHHHHHHHHHHHHHHh
Q 011720 129 AGLLWAGQGAIMTSYP-TATRKGTYISLFWSIFNMGGVVGGLIPFIMNY-HRTDAESVNDKT-YIAFMCFMSAGAALSLA 205 (479)
Q Consensus 129 ~g~~~~~~~~~i~e~~-~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~-~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~ 205 (479)
.........++..|+. ++++|++..++.....++|..+++.+...+.. ........+|+. ..+..++..+..++.++
T Consensus 123 ~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~ 202 (444)
T PRK09669 123 YTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFF 202 (444)
T ss_pred HHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 7776666778888887 67899999999988888888888765443321 110001123432 22233333333333333
Q ss_pred ccCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhh---hcccccc-cccccc-chhhhHHHH
Q 011720 206 ILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFY---SYQFNNV-NGLMFN-LRTRGLNNV 280 (479)
Q Consensus 206 ~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~---s~~~~~~-~~~~f~-~~~~~l~~~ 280 (479)
..+|+... ++ +++.+..++++ +.+++|.++.+....+...... +.. ..+ ..+..+ ....+....
T Consensus 203 ~~~e~~~~-~~------~~~~~~~~~~~---~~~~n~~~~~l~~~~~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~ 271 (444)
T PRK09669 203 MTKERYTP-EV------DNSSSVWKDLK---LLLGNSQWRIMFIFNVVLLTAVVTRGGA-TLYYVNYVLLRPDLATLFLV 271 (444)
T ss_pred CeEEecCC-CC------cCCCCHHHHHH---HHhCCchHHHHHHHHHHHHHHHHHHhhh-hheeeeeecCCHHHHHHHHH
Confidence 33332111 10 11223333333 3445665544433322221111 111 111 111122 222233444
Q ss_pred HHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHH
Q 011720 281 FYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFS 360 (479)
Q Consensus 281 ~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (479)
...+..+++.++.+++.|| +|||+....+..........+ + . .+ . .+.....+..++
T Consensus 272 ~~~i~~ii~~~~~~~l~~r--~gk~~~~~~~~~~~~~~~~~~----~-~---~~-----------~--~~~~~~~~~~~i 328 (444)
T PRK09669 272 TGMIAGLFGALLSERLLGK--FDRVRAFKWTIVAFVILSALI----F-F---IP-----------P--SNVWLIFALNIL 328 (444)
T ss_pred HHHHHHHHHHHHHHHHHHH--hChHHHHHHHHHHHHHHHHHH----H-H---hC-----------c--chHHHHHHHHHH
Confidence 5567778888889999999 678886665543221111111 1 0 11 0 122334455567
Q ss_pred HHhhHHHHHHHHHHHHHHhcCCc-------hhhhHHHHHHHHHHHHHHHHHhh
Q 011720 361 YGLLDAMFQSMVYWVIGALADDS-------ETLSRYTGFYKGVQSAGAAVAWQ 406 (479)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~i~~~~-------~~r~~~~~~~~~~~~~g~~i~~~ 406 (479)
.|++.+..++..++.+++.. |. +..+..++.+.+.+.+|.+++..
T Consensus 329 ~g~~~~~~~~~~~am~ad~~-d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~ 380 (444)
T PRK09669 329 FNFIQNLTTPLQWSMFSDVV-DYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGA 380 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhh-hhhhhhcCcCcchHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888876 31 12245678887777777777644
No 101
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.46 E-value=1.8e-11 Score=127.97 Aligned_cols=324 Identities=10% Similarity=-0.002 Sum_probs=168.9
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhh----ccch-hHHHhhhhHHHHHHHHHHHhhh-ccCc--hhhHHHHHHHHhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYN----IFGP-RVTLAAGCSTYVLYAGSFLYYN-HHHD--QTFAVVAGAVLGIG 128 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d----~~Gr-k~~l~ig~~~~~i~~~~~~~~~-~~~~--~~~li~~R~i~G~g 128 (479)
++...+....+.-..-++..++.|.++| |+|| |+-++++.+...+.....+... ..++ ...+++.-++.+++
T Consensus 40 s~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~ 119 (473)
T PRK10429 40 SVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMT 119 (473)
T ss_pred CHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHH
Confidence 3555666666666777888999999999 6698 5566667666555322222210 0111 23455666777888
Q ss_pred hhhhhhhhhhhhhcCC-CccchHhHHHHHHHHHHhhhhhhhHHHhhh-hhccCCcccccchhH-HHHHHHHHHHHHHHHh
Q 011720 129 AGLLWAGQGAIMTSYP-TATRKGTYISLFWSIFNMGGVVGGLIPFIM-NYHRTDAESVNDKTY-IAFMCFMSAGAALSLA 205 (479)
Q Consensus 129 ~g~~~~~~~~~i~e~~-~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i-~~~~~~~~~~~~~~~-~i~~~l~~l~~~l~~~ 205 (479)
..+..+.-.+...|++ ++++|.+..++-....++|..+++.+...+ ...........|... .+..++..+..++.++
T Consensus 120 ~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~ 199 (473)
T PRK10429 120 YTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLR 199 (473)
T ss_pred HHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 8887777788889998 699999999986666676655554443322 111100001122211 2222222222333333
Q ss_pred ccCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhh---ccccccccccc-cchhhhHHHHH
Q 011720 206 ILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFYS---YQFNNVNGLMF-NLRTRGLNNVF 281 (479)
Q Consensus 206 ~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~s---~~~~~~~~~~f-~~~~~~l~~~~ 281 (479)
..+|+... ++.+.+.+++.+.++.++. .+++|.++.+....+....... .....+..+.. +....++....
T Consensus 200 ~~~e~~~~--~~~~~~~~~~~~~~~~~~~---~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~ 274 (473)
T PRK10429 200 NVHEVYSS--DNQVSAEGSHLTLKDIVAL---IYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSY 274 (473)
T ss_pred CceecCCc--cccccccccCCCHHHHHHH---HhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHH
Confidence 34443211 0000000112233333332 2355555444433332222111 01011111111 22233445555
Q ss_pred HHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHH
Q 011720 282 YWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSY 361 (479)
Q Consensus 282 ~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (479)
.+++.+++.++.+++.|| +|||+..+.+..... +....+. .. . +. .. .......+..++.
T Consensus 275 ~~i~~ii~~~~~~~l~~r--~gkk~~~~~~~~~~~-~~~~~~~--~~--~-~~----------~~--~~~~~~~i~~~l~ 334 (473)
T PRK10429 275 AGAANLVTLILFPRLVKS--LSRRILWAGASIFPV-LSCGVLL--LM--G-LA----------AP--HNALLIVIAGILL 334 (473)
T ss_pred HHHHHHHHHHHHHHHHHH--cCcHHHHHHHHHHHH-HHHHHHH--HH--h-cc----------Cc--hhHHHHHHHHHHH
Confidence 668888999999999999 789887665543321 1111110 00 0 00 01 1223334455667
Q ss_pred HhhHHHHHHHHHHHHHHhcCC-------chhhhHHHHHHHHHHHHHHHHHhh
Q 011720 362 GLLDAMFQSMVYWVIGALADD-------SETLSRYTGFYKGVQSAGAAVAWQ 406 (479)
Q Consensus 362 g~~~~~~~~~~~~~~~~i~~~-------~~~r~~~~~~~~~~~~~g~~i~~~ 406 (479)
++..+..++..+.++++.. | .|..+..+|...+.+.++.+++..
T Consensus 335 g~~~~~~~~~~~am~ad~i-d~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~ 385 (473)
T PRK10429 335 NIGTALFWVLQVIMVADTV-DYGEYKLGIRCESIAYSVQTMVVKGGSAFAAF 385 (473)
T ss_pred HHHHHHHHHHHHHHHhhhh-hhhhHhcCccchhHHHHHHHHHHHHHHHHHHH
Confidence 7777778887888888875 2 222344788888888888777644
No 102
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.44 E-value=5.7e-11 Score=122.68 Aligned_cols=338 Identities=12% Similarity=0.045 Sum_probs=178.0
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhh----ccchhHHHhhhhHHHHHHHHHHHhhhccCch-----------------
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYN----IFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQ----------------- 115 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d----~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~----------------- 115 (479)
++........+.-....+.+++.|.++| |+|||+.++++..+..+.....+ . .+++.
T Consensus 37 ~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll-~-~~~~~~~~~~~~~~~~~~~~~i 114 (477)
T TIGR01301 37 PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILI-G-FAADIGHLFGDNLDKKTKPRAI 114 (477)
T ss_pred CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHH-H-hCchhhhhccccccccchhHHH
Confidence 3455555556666667788899999999 59999998886544333211111 1 12222
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccch--HhHHHHHHHHHHhhhhhhhHHHhhhhhcc------CCc-ccc--
Q 011720 116 TFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRK--GTYISLFWSIFNMGGVVGGLIPFIMNYHR------TDA-ESV-- 184 (479)
Q Consensus 116 ~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~R--G~~~g~~~~~~~~G~~iG~~i~~~i~~~~------~~~-~~~-- 184 (479)
+..+++=.+..++.....+...++++|..|+++| +++.+++....++|.++|+.++....... .+. +..
T Consensus 115 ~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~ 194 (477)
T TIGR01301 115 IVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCA 194 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccc
Confidence 1223333344457777777778899999998865 68999999999999999999886542110 000 000
Q ss_pred c-chhHHHHHHHHHHHHHHHHhccCCcccccCCCC---cccccccCCHHHHHHHHHHHhhc--hHHHHHHHHHH--Hhhh
Q 011720 185 N-DKTYIAFMCFMSAGAALSLAILPPSRVIRDDGT---RCTNIKYSKVSTEAIEILKLFRN--WKMLLLFPAAW--ASNF 256 (479)
Q Consensus 185 ~-~~~~~i~~~l~~l~~~l~~~~~~~~~~~r~d~~---~~~~~~~~~~~~~~~~~~~~~~~--~r~ll~~~~~~--~~~~ 256 (479)
+ ...|.+-.++.++..++.++..+|++...+++. +.+..++......+++.++.+++ |.++.+...++ +.+|
T Consensus 195 ~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~ 274 (477)
T TIGR01301 195 NLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAW 274 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 1 112333333344444444555555543111111 00001111112234555555432 23333333333 3344
Q ss_pred hh-hccccccccc-ccc-------chh-----hhHHHHHHHHHHHHHHHHhhhhccccccCc-cceeeehhhhhHHHHHH
Q 011720 257 FY-SYQFNNVNGL-MFN-------LRT-----RGLNNVFYWGAQMLGSVGIGYVMDFSFQSL-RTRGLVGIGIVALFGTA 321 (479)
Q Consensus 257 ~~-s~~~~~~~~~-~f~-------~~~-----~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gR-r~~~~~g~~~~~~~~~~ 321 (479)
+. ..+.+++... .|+ ..+ -.+....+.+...+.+++..++.+| +|+ |+....+..... .++.
T Consensus 275 f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~--~g~~k~~~~~s~~~~~-~~l~ 351 (477)
T TIGR01301 275 FPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG--WGAGKRLWGIVNIILA-ICLA 351 (477)
T ss_pred HHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccchhHHHHHHHHHH-HHHH
Confidence 21 1122333321 111 011 1233445566666767777777766 665 444344432221 1111
Q ss_pred HHHhHhhhhcccCCC----CCCCcccccCCCCC-chhHHHHHHHHHhhHHHHHHHHHHHHHHhcCC--chhhhHHHHHHH
Q 011720 322 IWGGGLASQLNYSHD----DPPKRLDFKTSGND-FAGPFVLYFSYGLLDAMFQSMVYWVIGALADD--SETLSRYTGFYK 394 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~--~~~r~~~~~~~~ 394 (479)
.. . +.....++ +..+ ..+... .+ .....+++...|+..+..+..+|+++++.. + .+..+..+|+.|
T Consensus 352 ~~---~-~i~~~~~~~~~~~~~~-~~~~~~-~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~-~~~~~~~G~~mgilN 424 (477)
T TIGR01301 352 AT---V-LVTYVAKNSRYYDGDG-ESLPPP-TGIKASALIVFAILGIPLAITYSIPFALASIRS-SNLGAGQGLSMGVLN 424 (477)
T ss_pred HH---H-HHHhhhhccccccccc-cccCcc-hhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHc-cccCCCCcchhhHHH
Confidence 11 1 11111100 0000 011110 22 466788889999999999999999999887 3 345588889888
Q ss_pred HHHHHHHHHHhh
Q 011720 395 GVQSAGAAVAWQ 406 (479)
Q Consensus 395 ~~~~~g~~i~~~ 406 (479)
....+.+.+...
T Consensus 425 ~~I~lpQii~sl 436 (477)
T TIGR01301 425 LAIVIPQIIVSL 436 (477)
T ss_pred HHHHHHHHHHHH
Confidence 888877777654
No 103
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.41 E-value=1.9e-10 Score=117.01 Aligned_cols=305 Identities=12% Similarity=0.073 Sum_probs=157.5
Q ss_pred HHHHHHHHhhhhh-hhhhhccchhHHHhhhhHHHHH-HHHHHHhhhccCc-hhhHHHHHHHHhhhhhhhhhhhhhhhhcC
Q 011720 67 ALYTTFSVFGILG-GGVYNIFGPRVTLAAGCSTYVL-YAGSFLYYNHHHD-QTFAVVAGAVLGIGAGLLWAGQGAIMTSY 143 (479)
Q Consensus 67 ~~~~~~aig~l~~-g~l~d~~Grk~~l~ig~~~~~i-~~~~~~~~~~~~~-~~~li~~R~i~G~g~g~~~~~~~~~i~e~ 143 (479)
+.+..-.+.+++. +...||+|||+.++++..+... ............+ ...++..-++..+..+..-+....+..|.
T Consensus 46 l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~ 125 (390)
T TIGR02718 46 LPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEH 125 (390)
T ss_pred HHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344443444444 4567889999997666533211 1111111111222 22334444444455555555555566677
Q ss_pred CCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcccccCCCCcccc
Q 011720 144 PTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSRVIRDDGTRCTN 222 (479)
Q Consensus 144 ~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~~~r~d~~~~~~ 222 (479)
.++++++...+.+.....+|.++|+.....+.. ..+|+ .|++..++..+..+..++++|+++ ++++.
T Consensus 126 ~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~------~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~-~~~~~----- 193 (390)
T TIGR02718 126 FNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG------KFGQRPAFLLVACVPLASLVCVLWLKDRAV-ASPEA----- 193 (390)
T ss_pred CCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH------HhCHHHHHHHHHHHHHHHHHHHHHcCCCCc-Ccccc-----
Confidence 777777888888888778888888866554432 24565 444444444444444444443322 11100
Q ss_pred cccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh----hhhccccccc-cccccchhhhHHHHHHH-HHHHHHHHHhhhh
Q 011720 223 IKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF----FYSYQFNNVN-GLMFNLRTRGLNNVFYW-GAQMLGSVGIGYV 296 (479)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~----~~s~~~~~~~-~~~f~~~~~~l~~~~~~-i~~~i~~~~~g~l 296 (479)
++ ++.++..+.+++|+++......+..+. .+++. +.+. +.+++.++.++.....+ +..+++.++.|++
T Consensus 194 --~~---~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l 267 (390)
T TIGR02718 194 --PL---ARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLS-KLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWL 267 (390)
T ss_pred --ch---hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHh-hHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 01 112233445566654433332222211 22322 3332 34566667777665555 4666778899999
Q ss_pred ccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHH
Q 011720 297 MDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVI 376 (479)
Q Consensus 297 ~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 376 (479)
.|| +|+|+....+.....+. ...+ ..... .+.. +.........++.++..+...+..+...
T Consensus 268 ~~r--~g~~~~l~~~~~~~~~~-~~~~---~~~~~-----------~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 328 (390)
T TIGR02718 268 VRR--AGLWRTFILGVGLAGSL-ALLW---FAQAA-----------FWLA--PGIAVAWSCSAFGSLITGITSVAIYTAF 328 (390)
T ss_pred HHH--hhHHHHHHHHHHHHHHH-HHHH---HHHHH-----------cccC--CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 67887665544322111 1111 10000 0111 1222223333344444555555555565
Q ss_pred HHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 377 GALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 377 ~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
.+...+++.+++.+++.+...++|..++..+.
T Consensus 329 ~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~ 360 (390)
T TIGR02718 329 MRFAGDGDQAGTDVTAVQSTRDLGELIASSIA 360 (390)
T ss_pred HHHhCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 66663447889999999999999888887665
No 104
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.39 E-value=4e-12 Score=118.12 Aligned_cols=307 Identities=16% Similarity=0.139 Sum_probs=163.0
Q ss_pred HHHHHHHHHH----hhhhhhhhhhc-cchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 65 NTALYTTFSV----FGILGGGVYNI-FGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 65 ~~~~~~~~ai----g~l~~g~l~d~-~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
..++|..+.. -|+++|++.|| +|-|+.-++-+++..+....+.+....+.+|+++++|++-|+|+-...++|..|
T Consensus 81 ftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~y 160 (459)
T KOG4686|consen 81 FTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKY 160 (459)
T ss_pred eeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcce
Confidence 4456666554 46899999996 455554444333333322222222234568999999999999999999999999
Q ss_pred hhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhh-ccCCcccccch---hHHHHHHHHHHHHHHHH---hccC---C
Q 011720 140 MTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNY-HRTDAESVNDK---TYIAFMCFMSAGAALSL---AILP---P 209 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~-~~~~~~~~~~~---~~~i~~~l~~l~~~l~~---~~~~---~ 209 (479)
..-+...|+.+..+|++.+...+|..+--++...+.. ...-..+...+ .+..+....+.-.++.. -+.+ |
T Consensus 161 av~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAe 240 (459)
T KOG4686|consen 161 AVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAE 240 (459)
T ss_pred eEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH
Confidence 9999999999999999999999998665444333210 00000011111 23333332222222211 1111 1
Q ss_pred cccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHH--Hhhhhhhcc-cc-cccc--ccccchhhh-HHHHHH
Q 011720 210 SRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAW--ASNFFYSYQ-FN-NVNG--LMFNLRTRG-LNNVFY 282 (479)
Q Consensus 210 ~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~--~~~~~~s~~-~~-~~~~--~~f~~~~~~-l~~~~~ 282 (479)
+.+.|+++..-+..+ +. ..+. ..|.++++..+.. +..++ .++ .. .+.. .+++....+ ..+.++
T Consensus 241 rilh~e~g~~Ge~pk-------Lt-dv~~-f~ppfw~~~iicv~yyva~f-PFi~lg~~fF~~rfGlS~~~a~~i~s~vy 310 (459)
T KOG4686|consen 241 RILHLEEGFLGEEPK-------LT-DVNT-FYPPFWVLVIICVLYYVAWF-PFITLGPMFFQKRFGLSAVSAGNILSTVY 310 (459)
T ss_pred HHHhhhcCcccCCcc-------cc-cccc-cCccHHHHHHHHHHHHHHHH-HHhhhhHHHHHHhhCCChhhccchhhhhh
Confidence 122222221100000 00 0111 2344444443322 22221 111 11 1222 234443333 334455
Q ss_pred HHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHH
Q 011720 283 WGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYG 362 (479)
Q Consensus 283 ~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 362 (479)
++. .+.+++.|.++|| .||+..+..+.........+. +.+ . -|+ ...-..+.|
T Consensus 311 ~Is-av~spvfg~i~Dk--~G~n~~wv~~a~~~tl~~H~~----l~F----t--------~ls--------Py~~m~~lG 363 (459)
T KOG4686|consen 311 GIS-AVLSPVFGAISDK--YGFNLWWVASACILTLLGHSG----LFF----T--------FLS--------PYTSMTFLG 363 (459)
T ss_pred hhh-hhhhhhHHHhHhh--hcceehhHHHHHHHHHHHhhh----HHh----h--------hcc--------HHHHHHHHh
Confidence 554 5566779999999 577765444332221111111 100 0 011 122333456
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 363 LLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 363 ~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
...+......|..++.+. |.++.+++.+..+.+|++|.++...+..
T Consensus 364 LsysllAcslWP~va~~v-pE~qLGTaygf~qsIqNLgla~i~Iiag 409 (459)
T KOG4686|consen 364 LSYSLLACSLWPCVASLV-PEEQLGTAYGFIQSIQNLGLAFIPIIAG 409 (459)
T ss_pred hhHHHHHHHHhhhhhhhC-CHHHhcchHHHHHHHHhhhhhHHhhhhh
Confidence 555555555667778887 6778899999999999999999887764
No 105
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.36 E-value=6.5e-11 Score=116.05 Aligned_cols=233 Identities=17% Similarity=0.149 Sum_probs=149.4
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
....+......|.++.+.++.++.+.+|+|+|+.+++|..++.+....++-++...++.+++++-++.|.|.+..-++++
T Consensus 47 ~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaN 126 (422)
T COG0738 47 YFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAAN 126 (422)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccc
Confidence 33555667788999999999999999999999999999999998433333222356788999999999999999999999
Q ss_pred hhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhcc-----CCccccc--------ch-hHHHHHHHHHHHHHHH
Q 011720 138 AIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHR-----TDAESVN--------DK-TYIAFMCFMSAGAALS 203 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~-----~~~~~~~--------~~-~~~i~~~l~~l~~~l~ 203 (479)
.+++.+.++++..+.+++.+.++.+|.++||+++..+..+. ++....+ ++ .|.....+..+..+..
T Consensus 127 p~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~ 206 (422)
T COG0738 127 PYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLI 206 (422)
T ss_pred hHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999877553310 0000011 11 2333333222222222
Q ss_pred HhccCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHH-HHHHHhhhh---hhccccccc-c-ccccchhhhH
Q 011720 204 LAILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLF-PAAWASNFF---YSYQFNNVN-G-LMFNLRTRGL 277 (479)
Q Consensus 204 ~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~-~~~~~~~~~---~s~~~~~~~-~-~~f~~~~~~l 277 (479)
...+.|+.. ..+.++ .+ +++. ...+.+++|+..+.. ..++|.+.. .++. .++. . .+.+..+.+.
T Consensus 207 ~~~k~p~~~-~~~~~~--~~-~~~~-----~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl-~~y~~~~~g~~~~~aa~ 276 (422)
T COG0738 207 LLSKLPDLQ-VAAPSL--GA-SGSA-----GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFL-VSYLEELLGLNEQQAAY 276 (422)
T ss_pred HhccCCcCC-cccccc--cc-cccc-----hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHH-HHHHHhcCCccHHHHHH
Confidence 233323211 111000 00 1110 122334455554433 334455431 2333 3332 1 3456666777
Q ss_pred HHHHHHHHHHHHHHHhhhhcccc
Q 011720 278 NNVFYWGAQMLGSVGIGYVMDFS 300 (479)
Q Consensus 278 ~~~~~~i~~~i~~~~~g~l~Dr~ 300 (479)
....+.++.++|.+++..+..|.
T Consensus 277 ~~s~~~~~~~vGRFig~~lm~~~ 299 (422)
T COG0738 277 YLSFFWVGFMVGRFIGSALMSRI 299 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 77788999999998888888774
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.33 E-value=5e-11 Score=122.97 Aligned_cols=319 Identities=13% Similarity=0.063 Sum_probs=181.6
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhh----ccchhHHHh-hhhHHHHHHHHHHHhh---hccC--chhhHHHHHHHHh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYN----IFGPRVTLA-AGCSTYVLYAGSFLYY---NHHH--DQTFAVVAGAVLG 126 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d----~~Grk~~l~-ig~~~~~i~~~~~~~~---~~~~--~~~~li~~R~i~G 126 (479)
++...+....+.-...++..++.|.++| |+|||+..+ +|.+...+........ ..+. ....+.+.-++..
T Consensus 35 ~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~ 114 (428)
T PF13347_consen 35 SPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFD 114 (428)
T ss_pred CHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHH
Confidence 3555555555556667778899999999 899766555 5666655533332221 0011 2234577777778
Q ss_pred hhhhhhhhhhhhhhhcCCC-ccchHhHHHHHHHHHHhhhhhhhHHHhhhhhc-cCCcccccchh-HHHHHHHHHHHHHHH
Q 011720 127 IGAGLLWAGQGAIMTSYPT-ATRKGTYISLFWSIFNMGGVVGGLIPFIMNYH-RTDAESVNDKT-YIAFMCFMSAGAALS 203 (479)
Q Consensus 127 ~g~g~~~~~~~~~i~e~~~-~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~-~~~~~~~~~~~-~~i~~~l~~l~~~l~ 203 (479)
++.........++..|..+ +++|.+..+.-.....+|..+.+.+...+... ..+....+|.. ..+..++.++..++.
T Consensus 115 ~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~ 194 (428)
T PF13347_consen 115 IAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLIT 194 (428)
T ss_pred HhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhh
Confidence 8888888888889999986 67999999999888888886655555443221 11101012322 223333333333344
Q ss_pred HhccCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccccccc----cccc-cchhhhHH
Q 011720 204 LAILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFYSYQFNNVN----GLMF-NLRTRGLN 278 (479)
Q Consensus 204 ~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~s~~~~~~~----~~~f-~~~~~~l~ 278 (479)
.+..+|++.+.+ +.+++.+.++.+++ .+++|.++.+....++.++..... ++.. .+.. +....+..
T Consensus 195 ~~~~ke~~~~~~-----~~~~~~~~~~~~~~---~~~nr~~~~l~~~~~~~~~~~~~~-~~~~~y~~~~vl~~~~~~~~~ 265 (428)
T PF13347_consen 195 FFFVKERSVEVT-----EQEKKISLRDSLRS---LFRNRPFRILLLAFFLQWLAFALM-NTFLPYYFTYVLGNEGLISIF 265 (428)
T ss_pred hheeeecccccc-----ccccccccccchhh---hcccchHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHhcCchhhHHH
Confidence 444444111110 01122233333332 334555544444333333211111 1111 1111 22334555
Q ss_pred HHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHH
Q 011720 279 NVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLY 358 (479)
Q Consensus 279 ~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (479)
.....+..+++.++.+++.|| +|||+....+...........+ + . + . .+.+......
T Consensus 266 ~~~~~~~~~v~~~~~~~l~~r--~gk~~~~~~~~~~~~~~~~~~~-----~-~--~-----------~--~~~~~~~i~~ 322 (428)
T PF13347_consen 266 MLIFFVASIVGSPLWGRLSKR--FGKKKVYIIGLLLAALGFLLLF-----F-L--G-----------P--GSPWLVLILF 322 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--ccceeehhhhHHHHHHHHHHHH-----H-H--H-----------h--hhHHHHHHHH
Confidence 567788889999999999999 7899977777654322221111 1 0 0 0 1234567777
Q ss_pred HHHHhhHHHHHHHHHHHHHHhcCCc------hhhhHHHHHHHHHHHHHHHHHhhh
Q 011720 359 FSYGLLDAMFQSMVYWVIGALADDS------ETLSRYTGFYKGVQSAGAAVAWQV 407 (479)
Q Consensus 359 ~~~g~~~~~~~~~~~~~~~~i~~~~------~~r~~~~~~~~~~~~~g~~i~~~~ 407 (479)
++.|++.+..+...+++++++.+.. +..+..+|++.+.+.++.+++..+
T Consensus 323 ~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i 377 (428)
T PF13347_consen 323 ILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAI 377 (428)
T ss_pred HHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHH
Confidence 8888888888888888888877222 234777888888888887777553
No 107
>PTZ00207 hypothetical protein; Provisional
Probab=99.31 E-value=5.2e-10 Score=118.03 Aligned_cols=101 Identities=16% Similarity=0.216 Sum_probs=80.2
Q ss_pred HHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhh---ccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCcc
Q 011720 71 TFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYN---HHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTAT 147 (479)
Q Consensus 71 ~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~---~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~ 147 (479)
.+++..+++|++.||+|||+++.++.+.+.+......... ..++.+.+++.|++.|+|.+...++....+.+++ |+
T Consensus 73 ~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~ 151 (591)
T PTZ00207 73 AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PS 151 (591)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hh
Confidence 3455677899999999999999999998887443332210 1257899999999999999998888888888987 58
Q ss_pred chHhHHHHHHHHHHhhhhhhhHHHh
Q 011720 148 RKGTYISLFWSIFNMGGVVGGLIPF 172 (479)
Q Consensus 148 ~RG~~~g~~~~~~~~G~~iG~~i~~ 172 (479)
+||+++|+......+|..+.+.+..
T Consensus 152 ~RG~a~Gi~~~~~gLGsaI~~~l~~ 176 (591)
T PTZ00207 152 NRGAVVAIMKTFTGLGSAILGSIQL 176 (591)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999976444433
No 108
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.28 E-value=2.5e-09 Score=110.94 Aligned_cols=117 Identities=19% Similarity=0.210 Sum_probs=86.1
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhcc-chhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIF-GPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~-Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
++.......+.......++++++|+++||+ |||+++.+|.++..+... +......+...++++-.+.++|.|...+.
T Consensus 43 s~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~l--ll~~~~~~~~~~~l~l~li~iG~G~~~~~ 120 (493)
T PRK15462 43 DDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHV--VLGASEIHPSFLYLSLAIIVCGYGLFKSN 120 (493)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHH--HHHHhhcchhHHHHHHHHHHHhccccccc
Confidence 344555556666677788899999999999 999999999988776332 22111112234455555556677776677
Q ss_pred hhhhhhcCCCcc--chHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 136 QGAIMTSYPTAT--RKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 136 ~~~~i~e~~~~~--~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
..++++|..|++ +|++.+++++...++|..++|.+...+.
T Consensus 121 ~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~ 162 (493)
T PRK15462 121 VSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQ 162 (493)
T ss_pred HHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHH
Confidence 778899998865 6999999999999999999999987664
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.25 E-value=1.2e-09 Score=113.39 Aligned_cols=309 Identities=11% Similarity=0.034 Sum_probs=156.4
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhcc----chhHHH-hhhhHHHHHHHHHHHh-h-hccCc--hhhHHHHHHHHhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIF----GPRVTL-AAGCSTYVLYAGSFLY-Y-NHHHD--QTFAVVAGAVLGI 127 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~----Grk~~l-~ig~~~~~i~~~~~~~-~-~~~~~--~~~li~~R~i~G~ 127 (479)
++...+...+..-...++..++.|.++||. |||+.. .++.+...+....... + ..+++ ....+..-++.++
T Consensus 42 ~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (448)
T PRK09848 42 GAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGL 121 (448)
T ss_pred CHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHH
Confidence 355666667777777888999999999997 666644 5555544332112111 1 11111 2234555677788
Q ss_pred hhhhhhhhhhhhhhcCC-CccchHhHHHHHHHHH-----HhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHH
Q 011720 128 GAGLLWAGQGAIMTSYP-TATRKGTYISLFWSIF-----NMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAA 201 (479)
Q Consensus 128 g~g~~~~~~~~~i~e~~-~~~~RG~~~g~~~~~~-----~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~ 201 (479)
+.++..+...+...|.. ++++|.+..++-.... .++..+++++..... . .....+..+. .++.+++.+
T Consensus 122 ~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g--~--~~~~~~~~~~--~~~~v~~~~ 195 (448)
T PRK09848 122 CYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSP--E--EMVSVYHFWT--IVLAIAGMV 195 (448)
T ss_pred HHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--C--chhhhHHHHH--HHHHHHHHH
Confidence 88887766666666655 4678998877654432 344455555543210 0 0001121121 122222222
Q ss_pred H---HHhccCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhh---hhcccccccccccc--ch
Q 011720 202 L---SLAILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFF---YSYQFNNVNGLMFN--LR 273 (479)
Q Consensus 202 l---~~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~---~s~~~~~~~~~~f~--~~ 273 (479)
+ .....||+. .++ .++++..+.++ +.+++|+++......+..... .....+.+....++ ..
T Consensus 196 ~~~~~~~~~~e~~-~~~-------~~~~~~~~~~~---~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 264 (448)
T PRK09848 196 LYFICFKSTRENV-VRI-------VAQPSLKISLQ---TLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGL 264 (448)
T ss_pred HHHHHHcCcEecc-CCC-------ccCCCHHHHHH---HHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHH
Confidence 1 122222221 111 01123333333 344666665543332222211 11111222222222 11
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchh
Q 011720 274 TRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAG 353 (479)
Q Consensus 274 ~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (479)
..++......++.+++.++.+++.|| +|+|+....+..... +.... +.+ .+ + .+.+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~l~~~l~~r--~g~~~~~~~g~~~~~-i~~~~----~~~---~~--------~-----~~~~~ 321 (448)
T PRK09848 265 FTVLVLVQNLVGTVASAPLVPGMVAR--IGKKNTFLIGALLGT-CGYLL----FFW---VS--------V-----WSLPV 321 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHH-HHHHH----HHH---cC--------c-----hhHHH
Confidence 22233333456678888899999999 678887666654321 11111 111 01 1 12233
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhcCCc-------hhhhHHHHHHHHHHHHHHHHHhh
Q 011720 354 PFVLYFSYGLLDAMFQSMVYWVIGALADDS-------ETLSRYTGFYKGVQSAGAAVAWQ 406 (479)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~-------~~r~~~~~~~~~~~~~g~~i~~~ 406 (479)
.....++.+++.+..++..+....+.. |. |.++...+++++.+.+|.+++..
T Consensus 322 ~~~~~~l~g~G~~~~~~~~~al~~~~~-~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~ 380 (448)
T PRK09848 322 ALVALAIASIGQGVTMTVMWALEADTV-EYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGS 380 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhHHhhCccchhHHHHHHHHHHHHHHHHHHH
Confidence 344455677777777777777777766 32 23588889999999888888644
No 110
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.24 E-value=2.5e-09 Score=105.70 Aligned_cols=314 Identities=12% Similarity=0.066 Sum_probs=176.9
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhh-hhHHHHHHHHHHHhhhcc-CchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAA-GCSTYVLYAGSFLYYNHH-HDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~i-g~~~~~i~~~~~~~~~~~-~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
.-..+.++.-+..++-+++-|.++|+.|+||-.+- ...+-+++....... .. .+.+..++.-++..++.....+...
T Consensus 59 ~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i-~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 59 YWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFI-PPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHh-CCCchHHHHHHHHHHHHHhcchhheehh
Confidence 44455566666667778899999999997655443 333333332232222 12 2345567778888888888888888
Q ss_pred hhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCc-------------ccccchhH-HHHHHHHHHHHHHH
Q 011720 138 AIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDA-------------ESVNDKTY-IAFMCFMSAGAALS 203 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~-------------~~~~~~~~-~i~~~l~~l~~~l~ 203 (479)
+.+.+..++++.||..++-|..-.+|+++--++........+.. +......+ +......+....+.
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 99999999999999999988888888877666654332111000 00001111 11111111222221
Q ss_pred HhccCCcccccCCCCcccccccCCHHHHH---HHHHHHhhchH-HHH-HHHHHHHh-hhhhhccccccc---cccccchh
Q 011720 204 LAILPPSRVIRDDGTRCTNIKYSKVSTEA---IEILKLFRNWK-MLL-LFPAAWAS-NFFYSYQFNNVN---GLMFNLRT 274 (479)
Q Consensus 204 ~~~~~~~~~~r~d~~~~~~~~~~~~~~~~---~~~~~~~~~~r-~ll-~~~~~~~~-~~~~s~~~~~~~---~~~f~~~~ 274 (479)
+...++.+ .+ + ..++.....+ ++.+|..++++ +.+ +.--++++ +..-...+.... .++++..+
T Consensus 218 ~~v~~~~~-~~-~------~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~ 289 (438)
T COG2270 218 LNVHDAEK-IS-S------PPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTE 289 (438)
T ss_pred hccccccc-cc-c------cchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHH
Confidence 22111111 00 0 0111222223 33333333332 211 11112221 220000001111 12334445
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhH
Q 011720 275 RGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGP 354 (479)
Q Consensus 275 ~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (479)
..+..+...+.+++|+++.|++.|| +|-|+....+++...+.+ ++ ... .+ .. ...
T Consensus 290 lll~g~~~~vvA~lg~ii~g~Ld~r--fg~k~vl~~~lvi~~~~~--~~----~~~---~~---------~~-----~~f 344 (438)
T COG2270 290 LLLIGIALSVVAALGAIIAGFLDER--FGSKPVLMIGLVILSIAA--LY----LIF---LE---------GE-----LDF 344 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hCCceeehHHHHHHHHHH--HH----HHH---cc---------cc-----HHH
Confidence 5667778899999999999999888 667777777755432211 21 111 10 11 123
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 355 FVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
..+.++.|...+..|....++.+++. |+++-++.+|+|+.....++.++.+.-
T Consensus 345 ~i~gll~g~s~G~~qA~SRSy~~~lv-p~~k~~~fFglyaltgra~S~~gp~lv 397 (438)
T COG2270 345 WILGLLVGTSLGGAQASSRSYLARLV-PKGKEGRFFGLYALTGRAASFLGPFLV 397 (438)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHhC-CCccccceeehhhhhhhHHHHHHHHHH
Confidence 44557899999999999999999999 788889999999999988888886644
No 111
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.23 E-value=1.8e-10 Score=114.31 Aligned_cols=275 Identities=16% Similarity=0.129 Sum_probs=159.0
Q ss_pred ccccchhHHHHHHHHHHhhhhhhhhhhhcCCCCCC---CChhhhhhHHHHHHH-HHHHhhhhhhhhhhccchhHHHhhhh
Q 011720 21 FRYNSPLVQVSLIGLVCFCCPGMFNALSGMGGGGQ---LDPTAANNANTALYT-TFSVFGILGGGVYNIFGPRVTLAAGC 96 (479)
Q Consensus 21 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~-~~aig~l~~g~l~d~~Grk~~l~ig~ 96 (479)
+-|+|+|..++..+++.+.....+.....+++..+ .+.+. ..-.+..|. .....++.+-++.|++|-|.++.+++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Ygs~~~-~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYGSSSA-ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhcchHH-HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 58999999888888877666443322211111100 01111 122344443 34445678899999999999999999
Q ss_pred HHHHHHHHHHHhhhcc---Cchh--hHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHH
Q 011720 97 STYVLYAGSFLYYNHH---HDQT--FAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIP 171 (479)
Q Consensus 97 ~~~~i~~~~~~~~~~~---~~~~--~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 171 (479)
..-++....=.....- +..+ ....+..+.+.+.-.....-+.+..-|.+|++|..+..+-.+...+|..+|.++.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 9888732221111111 2344 6678888888888777665566777889999999999998888889999998887
Q ss_pred hhhhhccCCcccccchhHHHHH---HHHHHHHHHHHhccCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHH
Q 011720 172 FIMNYHRTDAESVNDKTYIAFM---CFMSAGAALSLAILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLF 248 (479)
Q Consensus 172 ~~i~~~~~~~~~~~~~~~~i~~---~l~~l~~~l~~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~ 248 (479)
-.+..+.++..+.+|.....+. .+..+.+++..+.+++++... ++.....+.+.++. +...+.++++++.++.
T Consensus 197 pilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tP-ps~s~~~~~~~~f~---~si~~~~~n~~F~il~ 272 (480)
T KOG2563|consen 197 PILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTP-PSASQAALQDASFP---KSIKSCFKNRQFIILA 272 (480)
T ss_pred ceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CchhHhhhhcCcHH---HHHHHHHcCccHHHHH
Confidence 7554333223345564432222 222232333333333322110 10000000112233 4455677888776655
Q ss_pred HHH-HHhhhhhhcc--cc-ccccccccchhhhHHHHHHHHHHHHHHHHhhhhcccc
Q 011720 249 PAA-WASNFFYSYQ--FN-NVNGLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFS 300 (479)
Q Consensus 249 ~~~-~~~~~~~s~~--~~-~~~~~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~ 300 (479)
... +..+.+++.. ++ .....+++-...|......-++.++++.+.|.+.||.
T Consensus 273 ~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt 328 (480)
T KOG2563|consen 273 ICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKT 328 (480)
T ss_pred HHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhh
Confidence 432 2233333322 12 1122334334667777778888899999999999994
No 112
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.22 E-value=3.9e-09 Score=107.30 Aligned_cols=319 Identities=11% Similarity=0.041 Sum_probs=177.3
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhc----cch-hHHHhhhhHHHHHHHHHHHhhh-cc--CchhhHHHHHHHHhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNI----FGP-RVTLAAGCSTYVLYAGSFLYYN-HH--HDQTFAVVAGAVLGIG 128 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~----~Gr-k~~l~ig~~~~~i~~~~~~~~~-~~--~~~~~li~~R~i~G~g 128 (479)
++...+....+.=..-++.-++.|.++|| +|| |+=++.+.+.+.+......... .+ .+....++--.+.|++
T Consensus 46 s~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~ 125 (467)
T COG2211 46 SAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLG 125 (467)
T ss_pred cHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHH
Confidence 35555555555556678889999999996 676 5566777777777444443321 11 2344567778888899
Q ss_pred hhhhhhhhhhhhhcCC-CccchHhHHHHHHHHHHhhhhhhhHHHhh-hhhccCCcccccchh-HHHHHHHHHHHHHHHHh
Q 011720 129 AGLLWAGQGAIMTSYP-TATRKGTYISLFWSIFNMGGVVGGLIPFI-MNYHRTDAESVNDKT-YIAFMCFMSAGAALSLA 205 (479)
Q Consensus 129 ~g~~~~~~~~~i~e~~-~~~~RG~~~g~~~~~~~~G~~iG~~i~~~-i~~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~ 205 (479)
.......-.++..|+. +|+||.+..++-..+.++|..+-..+... +.....++...+|.. -+++.++.++..+++++
T Consensus 126 YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~ 205 (467)
T COG2211 126 YTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFF 205 (467)
T ss_pred HHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777777888776 58999999999988888886655544332 222211111223321 12223333333333444
Q ss_pred ccCCcccccCCCCcccccccCCHHHHHHHHHH-HhhchHHHHHHHHHHHhhhhhhc---cccccccccc--cchhhhHHH
Q 011720 206 ILPPSRVIRDDGTRCTNIKYSKVSTEAIEILK-LFRNWKMLLLFPAAWASNFFYSY---QFNNVNGLMF--NLRTRGLNN 279 (479)
Q Consensus 206 ~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~-~~~~~r~ll~~~~~~~~~~~~s~---~~~~~~~~~f--~~~~~~l~~ 279 (479)
-.+|+..++..+ +...+.++++.+. .+++|.+++.....++....... .+..+..+.. +.....+..
T Consensus 206 ~v~ER~~~~~~~-------~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~ 278 (467)
T COG2211 206 NVKERVVETQPT-------KTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLL 278 (467)
T ss_pred HhhcccCccccC-------cccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHH
Confidence 344443211100 0112222333333 33444433333222222111111 0011111111 222334555
Q ss_pred HHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHH
Q 011720 280 VFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYF 359 (479)
Q Consensus 280 ~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (479)
.....+.+++.++..++.+| +|||+...++.+..++...+.+. . + . .+.+..++..+
T Consensus 279 ~~~~~~~l~~~~~~p~L~~~--~gkk~~~~~~~~~~~i~~~~~~f------~--~-----------~--~~~~l~~~~~~ 335 (467)
T COG2211 279 LASGAGLLIGLILWPRLVKK--FGKKKLFLIGLLLLAVGYLLLYF------T--P-----------A--GSVVLIVVALI 335 (467)
T ss_pred HHHHHHHHHHHHhHHHHHHH--hchHHHHHHHHHHHHHHHHHHHh------h--c-----------C--cchHHHHHHHH
Confidence 66777778878889999988 78999888775443322222221 0 0 1 23445555667
Q ss_pred HHHhhHHHHHHHHHHHHHHhcCCc-------hhhhHHHHHHHHHHHHHHHHHhh
Q 011720 360 SYGLLDAMFQSMVYWVIGALADDS-------ETLSRYTGFYKGVQSAGAAVAWQ 406 (479)
Q Consensus 360 ~~g~~~~~~~~~~~~~~~~i~~~~-------~~r~~~~~~~~~~~~~g~~i~~~ 406 (479)
..+++.+..++.+|+.++++. |. |.-+..+|.+.+++-+|.+++-+
T Consensus 336 i~~~g~~~~~~l~wam~~d~v-Dyge~~TG~R~eGi~~s~~tF~~K~g~ala~~ 388 (467)
T COG2211 336 IAGVGTGIANPLPWAMVADTV-DYGEWKTGVRREGIVYSGMTFFRKLGLALAGF 388 (467)
T ss_pred HHHHHhhccccccHHHhcchh-hHHHHHhCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 788888888888898888765 22 22356677788888777777654
No 113
>PRK11462 putative transporter; Provisional
Probab=99.18 E-value=1.7e-08 Score=105.07 Aligned_cols=315 Identities=9% Similarity=-0.015 Sum_probs=157.9
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhc----cchhHHHh-hhhHHHHHHHHHHHhh-hccCc--hhhHHHHHHHHhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNI----FGPRVTLA-AGCSTYVLYAGSFLYY-NHHHD--QTFAVVAGAVLGIG 128 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~----~Grk~~l~-ig~~~~~i~~~~~~~~-~~~~~--~~~li~~R~i~G~g 128 (479)
++...+....+.-..-++..++.|.++|| +|||+..+ +|.+.+.+........ ..+++ ...+++.-++..++
T Consensus 43 ~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~ 122 (460)
T PRK11462 43 PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLL 122 (460)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHH
Confidence 45555555555556678889999999996 68865544 5656655533222221 11111 23456666677888
Q ss_pred hhhhhhhhhhhhhcCCC-ccchHhHHHHHHHHHHhhhhhhhHHHhhhh-hccCCcccccchh-HHHHHHHHHHHHHHHHh
Q 011720 129 AGLLWAGQGAIMTSYPT-ATRKGTYISLFWSIFNMGGVVGGLIPFIMN-YHRTDAESVNDKT-YIAFMCFMSAGAALSLA 205 (479)
Q Consensus 129 ~g~~~~~~~~~i~e~~~-~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~-~~~~~~~~~~~~~-~~i~~~l~~l~~~l~~~ 205 (479)
..+....-.++..|+++ +++|.+..++.....++|..+++.+...+. ...+++...+|.. ..++.++.++...+.++
T Consensus 123 ~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 123 YTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred HHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 88877777788888876 899999999999888888877776644332 1111001122322 12222222232223233
Q ss_pred ccCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh---hhhcccccc-cccccc-chhhhHHHH
Q 011720 206 ILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF---FYSYQFNNV-NGLMFN-LRTRGLNNV 280 (479)
Q Consensus 206 ~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~---~~s~~~~~~-~~~~f~-~~~~~l~~~ 280 (479)
..+|+...+ .++.+.++.++. .+++|.++.+....+.... ..+.. ..+ ..+.++ ....+....
T Consensus 203 ~~kE~~~~~--------~~~~~~~~~l~~---~~~Nk~~~~l~~~~~~~~~~~~~~~~~-~~y~~~y~~g~~~~~~~~l~ 270 (460)
T PRK11462 203 TTKERVEAP--------PTTTSMREDLRD---IWQNDQWRIVGLLTIFNILAVCVRGGA-MMYYVTWILGTPEVFVAFLT 270 (460)
T ss_pred cceeccCCC--------ccCCCHHHHHHH---HhCChHHHHHHHHHHHHHHHHHHHHhH-hhhhhhhhcCChHHHHHHHH
Confidence 333321110 012233433332 3344444333222211111 00000 111 111122 222334455
Q ss_pred HHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHH
Q 011720 281 FYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFS 360 (479)
Q Consensus 281 ~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (479)
.+++..+++.++.+++.|| ++||+....+..........+ + + .+ + .+....+...++
T Consensus 271 ~~~i~~iig~~l~~~l~~r--~gkk~~~~~~~~~~~~~~~~~----~-~---~~--------~-----~~~~~~~~~~~l 327 (460)
T PRK11462 271 TYCVGNLIGSALAKPLTDW--KCKVTIFWWTNALLAVISLAM----F-F---VP--------M-----QASITMFVFIFV 327 (460)
T ss_pred HHHHHHHHHHHHHHHHHHH--hChHHHHHHHHHHHHHHHHHH----H-H---hc--------h-----hHHHHHHHHHHH
Confidence 6788889999999999999 667765443322211111111 1 1 11 0 111112233344
Q ss_pred HHhhHHHHHHHHHHHHHHhcCC----chhhh--HHHHHHHHHHHHHHHHHhh
Q 011720 361 YGLLDAMFQSMVYWVIGALADD----SETLS--RYTGFYKGVQSAGAAVAWQ 406 (479)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~i~~~----~~~r~--~~~~~~~~~~~~g~~i~~~ 406 (479)
.|+..+..++..+..+++..+. ..+|. ..++...+.+.+|.+++..
T Consensus 328 ~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~ 379 (460)
T PRK11462 328 IGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGA 379 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 5666666666667676665511 12333 3345555666666655543
No 114
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.16 E-value=3.9e-08 Score=97.53 Aligned_cols=317 Identities=11% Similarity=0.068 Sum_probs=174.5
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccc-----hhHHHhhhhHHHHHHHHH-----HHhhhc-----cCc--hh--hHHH
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFG-----PRVTLAAGCSTYVLYAGS-----FLYYNH-----HHD--QT--FAVV 120 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~G-----rk~~l~ig~~~~~i~~~~-----~~~~~~-----~~~--~~--~li~ 120 (479)
+.....++.|. .+......|..+|+.+ ||..++++.......... .++... .++ .+ ....
T Consensus 16 lv~~lval~~~-~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l 94 (403)
T PF03209_consen 16 LVALLVALHYL-VAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAAL 94 (403)
T ss_pred HHHHHHHHHHH-HHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHH
Confidence 34444444444 4556788999999999 888877765433221111 111111 002 22 2344
Q ss_pred HHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCccccc-chhHHHHHHHHHHH
Q 011720 121 AGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVN-DKTYIAFMCFMSAG 199 (479)
Q Consensus 121 ~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~-~~~~~i~~~l~~l~ 199 (479)
.=++.|+|.+...++--++++|.+|||+|++..++.|.+..+|.+++..+...+... ++ .+...+.-....+.
T Consensus 95 ~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~------~s~~rL~~v~~~~a~i~ 168 (403)
T PF03209_consen 95 AFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP------FSPERLIQVIQGVALIA 168 (403)
T ss_pred HHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc------cCHHHHHHHHHHHHHHH
Confidence 556678888888888888999999999999999999999999999998887655321 22 23332222222222
Q ss_pred H---HHHHhccCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhccccccccc--cccchh
Q 011720 200 A---ALSLAILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFYSYQFNNVNGL--MFNLRT 274 (479)
Q Consensus 200 ~---~l~~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~s~~~~~~~~~--~f~~~~ 274 (479)
. +++++-. |++..+.. ....+++.++++.+++.++....+|++....+........-.++..|-.. +.++.+
T Consensus 169 ~~l~~ia~wg~-E~r~~~~~--~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~e 245 (403)
T PF03209_consen 169 LLLNLIALWGQ-EPRRSRRA--AAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGE 245 (403)
T ss_pred HHHHHHHHHhc-ccCCcccc--cCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHH
Confidence 2 2233322 32221111 11112345666666666544334454443322222111111111222222 234555
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhH
Q 011720 275 RGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGP 354 (479)
Q Consensus 275 ~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (479)
....+...+.+.++|-...|++..|. .++++...+|..... .++... +.... .+ +.+..
T Consensus 246 TT~Lta~~~~G~L~G~~~~g~~l~~~-~~~~~~a~~G~~~~~-~~f~li----i~a~~------------~~---~~~~~ 304 (403)
T PF03209_consen 246 TTRLTAFWGGGTLLGMLLAGFLLSRR-LGKKRTAALGCLLGA-LAFALI----ILAGP------------LG---SPWLF 304 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-CCchHHHHHHHHHHH-HHHHHH----HHHHh------------cc---cchHH
Confidence 66677788999999999999988752 566655555543322 222221 11110 11 11122
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 355 FVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
...-+++|+..+.+..-.-..+=++. ++++.+...|.+-..|+++..++.+..
T Consensus 305 ~~~~~l~G~g~G~f~vgals~mM~lt-~~~~aG~~mG~WGaaQA~A~Glg~~~G 357 (403)
T PF03209_consen 305 RPGVFLLGLGNGLFTVGALSLMMDLT-SAGRAGLFMGAWGAAQAIARGLGTFLG 357 (403)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhCC-CCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 23334566666665554444444566 567778889999999988888877665
No 115
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.12 E-value=4.4e-09 Score=103.63 Aligned_cols=254 Identities=15% Similarity=0.113 Sum_probs=142.7
Q ss_pred CchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccC-Cc---------c
Q 011720 113 HDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRT-DA---------E 182 (479)
Q Consensus 113 ~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~-~~---------~ 182 (479)
.+++.++++-++.|.|.+...++.+.+++++.+++++.+.+++.+.++.+|.++||++...+..... +. .
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~ 87 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAE 87 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHH
Confidence 5688999999999999999999999999999999999999999999999999999999886543210 00 0
Q ss_pred cccchh-HHHHHHHHHHHHHHHHhccCCcccccCCCCcccccccCCHHHHHHHHHHHhhchHHHHHH-HHHHHhhhh---
Q 011720 183 SVNDKT-YIAFMCFMSAGAALSLAILPPSRVIRDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLF-PAAWASNFF--- 257 (479)
Q Consensus 183 ~~~~~~-~~i~~~l~~l~~~l~~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~-~~~~~~~~~--- 257 (479)
..+|+. |++...+..+..++..+...|+.. ++|+++.. +++. .+.+ +.+++|++++.. ..+++.+..
T Consensus 88 ~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~-~~~~~~~~--~~~~--~~~~---~~~~~~~~~l~~~~~f~yvg~e~~~ 159 (310)
T TIGR01272 88 AAKVHTPYLLLAGALAVLAIIFAFLPLPELQ-EADVARVS--SGDT--TQKT---SAFQFTHLVLGALGIFVYVGAEVSA 159 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCCC-cccccccc--cccc--cchh---hHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 123433 333333333322222333223211 11111100 0110 0111 223445544433 233333221
Q ss_pred hhcccccccc----ccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhccc
Q 011720 258 YSYQFNNVNG----LMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNY 333 (479)
Q Consensus 258 ~s~~~~~~~~----~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 333 (479)
.++. ..|+. .+++..+.++....+..+.++|+++.+++.|| +|+|+....+..... +...+ . . .
T Consensus 160 ~~w~-~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r--~g~~~~l~~~~~l~~-~~~~l----~-~-~-- 227 (310)
T TIGR01272 160 GSFL-VNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM--ISQGRYLAFNAFLAV-LLSIG----A-A-L-- 227 (310)
T ss_pred HHHH-HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHH-HHHHH----H-H-H--
Confidence 1222 33332 23455566777788899999999999999999 677765554433221 11111 1 0 0
Q ss_pred CCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHH
Q 011720 334 SHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVA 404 (479)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~ 404 (479)
. .+.. .....++.|++.+...|.......+.. +++.+++.++. ....+|.++.
T Consensus 228 ~--------------~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~--~~~~~~asai~-~~~~~Gg~i~ 280 (310)
T TIGR01272 228 T--------------HGYV-AMWFVLALGLFNSIMFPTIFSLALNAL--GRHTSQGSGIL-CLAIVGGAIV 280 (310)
T ss_pred c--------------CCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhh--hhhhhhhHHHH-HHHHhcchHH
Confidence 0 0111 122344677887777787776666666 23344555553 2333444444
No 116
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.11 E-value=1.4e-09 Score=92.64 Aligned_cols=130 Identities=17% Similarity=0.266 Sum_probs=97.2
Q ss_pred HHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccch
Q 011720 70 TTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRK 149 (479)
Q Consensus 70 ~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~R 149 (479)
.+..++.++.+++.||+|||+.+.++.....+.... .. ..++.+.+++.+++.|++.+...+....++.|..|+++|
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 85 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAM--FA-LSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEER 85 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHH--HH-HhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhh
Confidence 345567889999999999999999888776653222 21 246788899999999999999888888999999999999
Q ss_pred HhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccC
Q 011720 150 GTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILP 208 (479)
Q Consensus 150 G~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~ 208 (479)
++..++......+|..+|+.+...+.. ..+|+ .+.+...+..+..+...++.|
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVLAQ------FLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHHhc------ccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999988876642 12342 344444444444444444443
No 117
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.11 E-value=4.8e-08 Score=99.46 Aligned_cols=314 Identities=15% Similarity=0.057 Sum_probs=159.2
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccch-hHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGP-RVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWA 134 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Gr-k~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~ 134 (479)
.+....+...++......++++++|.++||.++ |+.+.+..++-.+ ..+.....++.+.+++.-++..+......+
T Consensus 34 ~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~---~~~~~~~~~~f~~~~~~~~l~~~~~~p~~p 110 (400)
T PF03825_consen 34 FSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSAL---ALLLLAFSSSFWWLFVIMLLFSFFFSPTMP 110 (400)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHH---HHHHHHHhccHHHHHHHHHHHHHHHccHHH
Confidence 345566666777777778888999999999874 6666665554333 111111245677777767676666665555
Q ss_pred hhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCccccc
Q 011720 135 GQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVIR 214 (479)
Q Consensus 135 ~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~r 214 (479)
-..++..+... ++++-.|-.-..-++|-+++++..........+.+...+ .+.+...+..+..... +.+|..+.+|
T Consensus 111 l~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~ll~~~~-l~lp~~~~~~ 186 (400)
T PF03825_consen 111 LSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSL-IFYIAAILSLLLAGFA-LFLPKTPPKR 186 (400)
T ss_pred HHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccH-HHHHHHHHHHHHHHHH-HhCCCCcccc
Confidence 55555555543 333333433333455666654431111110000011112 2222222222222222 2334332112
Q ss_pred CCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh----hhhcccccccc-cc-ccchhhhHHHHHHHHHHHH
Q 011720 215 DDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF----FYSYQFNNVNG-LM-FNLRTRGLNNVFYWGAQML 288 (479)
Q Consensus 215 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~----~~s~~~~~~~~-~~-f~~~~~~l~~~~~~i~~~i 288 (479)
++++. .+ +...++.++.+++|+++......+..+. +|.|. +.+.. .+ ++....+.......+.+++
T Consensus 187 ~~~~~----~~---~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~-~~yl~~~gg~~~~~~g~~~~l~~~aEi~ 258 (400)
T PF03825_consen 187 SAKES----VK---KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFF-SIYLQELGGYSGSTIGILWALGVVAEIP 258 (400)
T ss_pred ccCCC----cc---cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcccchhhHHHHHHHHHHHHHHH
Confidence 11100 00 1112344577788887655444333332 33333 33332 12 2233344444455677888
Q ss_pred HHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHH---HHHHHHHhhH
Q 011720 289 GSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPF---VLYFSYGLLD 365 (479)
Q Consensus 289 ~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~ 365 (479)
.-...+++..| +|-|+...++.... ++= |.. +. +. .+ +.+.... .-.++.|...
T Consensus 259 ~f~~~~~~~~r--~g~~~ll~~a~~~~-~vR---~~l-~a----~~----------~~--~~~~~~~~~~l~q~lhG~tf 315 (400)
T PF03825_consen 259 FFFFSGRFLKR--FGIKWLLLLALVAY-AVR---WLL-YA----YF----------SD--PWPFIVALQLLGQLLHGLTF 315 (400)
T ss_pred HHHHHHHHHHh--cCHHHHHHHHHHHH-HHH---HHH-HH----Hh----------cC--CcHHHHHHHHHHHhhhhHHH
Confidence 87888888877 56776555443221 111 110 11 00 01 1111111 1123577776
Q ss_pred HHHHHHHHHHHHHhcCCchhhhHHHHHHHHH-HHHHHHHHhhhc
Q 011720 366 AMFQSMVYWVIGALADDSETLSRYTGFYKGV-QSAGAAVAWQVD 408 (479)
Q Consensus 366 ~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~-~~~g~~i~~~~~ 408 (479)
+........++.+.. |++.|+++-+++... ..+|..++..++
T Consensus 316 ~~~~~a~~~yi~~~~-p~~~~at~Q~l~~~~~~Glg~~iG~~ig 358 (400)
T PF03825_consen 316 GLFHAASVRYIDRIA-PPELRATAQGLYSALSFGLGGAIGSLIG 358 (400)
T ss_pred HHHHHHHHHHHHHhC-CccchHHHHHHHHHHHhhHHHHHHHHHH
Confidence 666666777899999 889999999998875 467777776655
No 118
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.01 E-value=4.5e-08 Score=99.92 Aligned_cols=155 Identities=15% Similarity=0.096 Sum_probs=108.9
Q ss_pred CccccccchhHHHHHHHHHHhhhhhh--------hhhhhcCCCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccch-
Q 011720 18 YSLFRYNSPLVQVSLIGLVCFCCPGM--------FNALSGMGGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGP- 88 (479)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~f~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Gr- 88 (479)
+.....+.+|.-+.+..+..|+...- +..++.+..+ .+.+..+...++.-++.+++++..|.-.+|.|.
T Consensus 24 ~~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~--A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~ 101 (488)
T KOG2325|consen 24 SPLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPT--ATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV 101 (488)
T ss_pred ccccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCC--CCcchhhHHHHHHHHHHHhcchhhcccccccCCc
Confidence 33444555666666666666665432 2223332222 234456666777777888888999999999996
Q ss_pred hHHHhhhhHHHHHHHHHHHhhh-ccC-chhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhh
Q 011720 89 RVTLAAGCSTYVLYAGSFLYYN-HHH-DQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVV 166 (479)
Q Consensus 89 k~~l~ig~~~~~i~~~~~~~~~-~~~-~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~i 166 (479)
|+.++.|.++.++....++... ..+ +.+.++++|++.|+|.|... .--.|+++.+.+++|-|+++.......+|.++
T Consensus 102 k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~il 180 (488)
T KOG2325|consen 102 KKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA-VLRAYIADASTVEDRPRAFAATSGGFVLGIIL 180 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH-HHHHHHHhccCccchHHHHHHhhhHHHHHHHH
Confidence 8888889887776333332222 233 67899999999999988764 55689999999999999999999888888888
Q ss_pred hhHHHhhhh
Q 011720 167 GGLIPFIMN 175 (479)
Q Consensus 167 G~~i~~~i~ 175 (479)
||.+.....
T Consensus 181 Gp~~q~~f~ 189 (488)
T KOG2325|consen 181 GPTIQLAFT 189 (488)
T ss_pred hHHHHHHHh
Confidence 888776543
No 119
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.00 E-value=1.3e-08 Score=107.03 Aligned_cols=112 Identities=9% Similarity=0.020 Sum_probs=78.0
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHH-HHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhh
Q 011720 62 NNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGS-FLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIM 140 (479)
Q Consensus 62 ~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~-~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i 140 (479)
.........+..++++++|+++||+|||+.+.++.++..+.... +... .+++...++++|++.|++.+..+.....++
T Consensus 289 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 367 (490)
T PRK10642 289 VLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI-NSNVIGLIFAGLLMLAVILNCFTGVMASTL 367 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555666778889999999999999998887654432222 2222 235577788999999998887777777888
Q ss_pred hcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 141 TSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 141 ~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
.|++|++.||+.+|+.+....++..+++.+...+
T Consensus 368 ~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l 401 (490)
T PRK10642 368 PAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWL 401 (490)
T ss_pred HHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999974333334445555554433
No 120
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.99 E-value=1.3e-07 Score=91.79 Aligned_cols=297 Identities=13% Similarity=0.089 Sum_probs=177.7
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
+....+...++-...+++.+++++++..|+|.++++..+.++..+ +..+-. ..+.+.++.+-.+.|.|.+...+--
T Consensus 45 s~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~--G~~iR~--~~~~~~L~~gt~l~G~gIav~nVLL 120 (395)
T COG2807 45 SFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAA--GILIRS--LGGLPLLFLGTLLAGAGIAVINVLL 120 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHH--HHHHHh--cccHHHHHHHHHHHHhhHHHHHHhh
Confidence 344556666777788999999999999999999999999887665 443322 2467889999999999999999999
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHH-HHHHHHHHHHHHhccCCcccccC
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAF-MCFMSAGAALSLAILPPSRVIRD 215 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~-~~l~~l~~~l~~~~~~~~~~~r~ 215 (479)
|..+-+.. ||+-|..+|+|......|..+++.++-.+..+. .+|+.=+.+ .....+..++ + .|.. .|+
T Consensus 121 PslIK~~F-pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~-----~gW~~aL~~WAl~allAl~~--W-lPq~--~r~ 189 (395)
T COG2807 121 PSLIKRDF-PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS-----GGWRGALGFWALLALLALLI--W-LPQA--LRE 189 (395)
T ss_pred hHHHHhhc-ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh-----ccHHHHHHHHHHHHHHHHHH--H-hhhc--ccc
Confidence 99998876 567899999999999999999988877665431 345422111 2222232222 2 2221 111
Q ss_pred CCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhh-hhhcc--ccccc-cccccchhhhHHHHHHHHHHHHHHH
Q 011720 216 DGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNF-FYSYQ--FNNVN-GLMFNLRTRGLNNVFYWGAQMLGSV 291 (479)
Q Consensus 216 d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~-~~s~~--~~~~~-~~~f~~~~~~l~~~~~~i~~~i~~~ 291 (479)
..... ..+. ++..+.+++|+-+.+...+-.+.+ +|+.. ++.+. +.+++..+.+.......+.++..++
T Consensus 190 ~~~~~-~~~~-------~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~l 261 (395)
T COG2807 190 QAASI-ATKL-------VSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTAL 261 (395)
T ss_pred ccccc-cccc-------ccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHH
Confidence 00000 0000 111123456665555544333332 23221 24433 4677777778766677888888888
Q ss_pred HhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHH
Q 011720 292 GIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSM 371 (479)
Q Consensus 292 ~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 371 (479)
....+.+|.+ .+|+........+ .+ -..+ +. +. | .+ .... . .+..|++.++..+.
T Consensus 262 l~P~la~R~~-n~r~~~~~~~~~~-l~---G~~G-~~----~~----P-----~~---~~~l--w-~~llG~G~G~~F~l 316 (395)
T COG2807 262 LIPLLARRSK-NQRPLVVLALLLM-LV---GLVG-LL----LA----P-----GQ---LPIL--W-ALLLGLGQGGAFPL 316 (395)
T ss_pred HHHHHHHHhc-ccchHHHHHHHHH-HH---HHHH-HH----Hh----h-----hh---HHHH--H-HHHHhCccchHHHH
Confidence 8888888742 4555333222211 11 1111 11 11 0 11 1111 1 36688888887777
Q ss_pred HHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHH
Q 011720 372 VYWVIGALADDSETLSRYTGFYKGVQSAGAAVA 404 (479)
Q Consensus 372 ~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~ 404 (479)
.-..+..-.+|++ ++..+.-+.|++|..++
T Consensus 317 aL~li~~rs~~a~---~Aa~LSgmaQg~GYllA 346 (395)
T COG2807 317 ALTLILLRSSDAA---IAAALSGMAQGVGYLLA 346 (395)
T ss_pred HHHHHHhhcCChH---HHHHHHHHhhhhhHHHH
Confidence 7777777665665 34445555666665554
No 121
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.98 E-value=5e-09 Score=113.87 Aligned_cols=106 Identities=10% Similarity=0.029 Sum_probs=87.4
Q ss_pred HHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCC
Q 011720 66 TALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPT 145 (479)
Q Consensus 66 ~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~ 145 (479)
.+..++..++.+++++++||+|||++++++.++..+...... ..++...+++.+++.|++.+..+++..++++|+.|
T Consensus 602 ~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~---~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~P 678 (742)
T TIGR01299 602 FLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLS---FGNSESAMIALLCLFGGLSIAAWNALDVLTVELYP 678 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH---HHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344455667889999999999999999988887666322222 24556778888999999988888888899999999
Q ss_pred ccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 146 ATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 146 ~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
.++||+++|+..+...+|.++||.+...+
T Consensus 679 t~~Rgta~Gi~~~~~rlGaiigp~i~g~L 707 (742)
T TIGR01299 679 SDKRATAFGFLNALCKAAAVLGILIFGSF 707 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987655
No 122
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.90 E-value=2.4e-08 Score=102.69 Aligned_cols=150 Identities=13% Similarity=0.087 Sum_probs=103.3
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhc-cCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 61 ANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNH-HHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 61 ~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~-~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
.....++......++.++.+.++||+|||+.+.++.++..+.......... ..+.+.+++.+++.|++.+...+....+
T Consensus 253 ~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~ 332 (418)
T TIGR00889 253 ASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVF 332 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555566677889999999999999999998877653222222110 0124567889999999999988888899
Q ss_pred hhcCCCccchHhHHHHHH-HHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCc
Q 011720 140 MTSYPTATRKGTYISLFW-SIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPS 210 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~-~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~ 210 (479)
+.|..|+++||+..|+.+ ....+|..+|+.++..+..+......++|+ .|.+..++.++..++..++.+++
T Consensus 333 i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 333 VEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999997 567899999999887664321100113454 45555555555555545555544
No 123
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.90 E-value=3.9e-07 Score=92.30 Aligned_cols=316 Identities=13% Similarity=0.062 Sum_probs=177.6
Q ss_pred HHHhhhhhhhhhhc-cchhHHHhhhhHHHHHHHHHHHhhhcc-CchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCc--c
Q 011720 72 FSVFGILGGGVYNI-FGPRVTLAAGCSTYVLYAGSFLYYNHH-HDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTA--T 147 (479)
Q Consensus 72 ~aig~l~~g~l~d~-~Grk~~l~ig~~~~~i~~~~~~~~~~~-~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~--~ 147 (479)
.-..++++|+++|| +|+|++++.|++++.+....+... + .+...++++-++.++|.|..-+....++.|+.|| .
T Consensus 74 VY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~--~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp 151 (498)
T COG3104 74 VYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAIS--SVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP 151 (498)
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcc--ccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc
Confidence 34567899999999 699999999999988844333221 1 3577889999999999999999999999998763 3
Q ss_pred chHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccc-hhHHHHHHHHHHHHHHHHhccCC--------cccccCCCC
Q 011720 148 RKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVND-KTYIAFMCFMSAGAALSLAILPP--------SRVIRDDGT 218 (479)
Q Consensus 148 ~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~-~~~~i~~~l~~l~~~l~~~~~~~--------~~~~r~d~~ 218 (479)
+|-..+++++...++|+.+++.+...+..+ .+| ..|....+-+.++++...+.++. ++..++.+.
T Consensus 152 rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~------~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~ 225 (498)
T COG3104 152 RRDGGFTLFYMGINIGSLIAPIITGLLAIN------YGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNF 225 (498)
T ss_pred ccCCCccEEEEEeehHHHHHHHHHHHHHHh------hCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhh
Confidence 377888999999999999999998866432 334 23444344444554444433321 111110000
Q ss_pred cccc----------c------ccCCHHH---------H---HHHHHHH----hhchHHHHHHHHHHHhhhhhhcc--c-c
Q 011720 219 RCTN----------I------KYSKVST---------E---AIEILKL----FRNWKMLLLFPAAWASNFFYSYQ--F-N 263 (479)
Q Consensus 219 ~~~~----------~------~~~~~~~---------~---~~~~~~~----~~~~r~ll~~~~~~~~~~~~s~~--~-~ 263 (479)
.... . ..+.+.. + +++..+. --|+|++..+++++..-+++..+ . +
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~s 305 (498)
T COG3104 226 LLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGS 305 (498)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 0000 0 0000000 0 0001111 12456777777766554332211 1 1
Q ss_pred ccc-------ccc---ccchhhhHHHHHHHHHHHHHHHHhhhhccccccC-ccceeee--hhhhhH-HHHHHHHHhHhhh
Q 011720 264 NVN-------GLM---FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQS-LRTRGLV--GIGIVA-LFGTAIWGGGLAS 329 (479)
Q Consensus 264 ~~~-------~~~---f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~g-Rr~~~~~--g~~~~~-~~~~~~~~~~~~~ 329 (479)
+.+ ... ++. ..++......+.-++.+++...+.-|..-+ |+++.-. ++.... -+.+++...
T Consensus 306 sl~~~a~~~v~~~~~g~~v-p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~---- 380 (498)
T COG3104 306 SLNLYADRNVNRQIFGFEV-PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLL---- 380 (498)
T ss_pred hHHHHHHHhhcccccceec-CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHH----
Confidence 111 111 111 122333334444455555554444331112 2232222 221110 111111111
Q ss_pred hcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 330 QLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
...+..+ | + .. .+.+.....|++..++.-+..|.-.+...++. |++..+..++++-..++.++.++-.+++
T Consensus 381 ~~~~~~~--~---~-~~--~s~~~lil~y~l~s~gEL~iSpvGLs~~t~la-P~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 381 AGIWFGG--P---S-GL--VSVWWLVLSYVLQSFGELFISPVGLSMVTKLA-PPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHhhcC--C---C-CC--cCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 1011111 0 1 12 44566778889999999988888888888888 8888999999999999999999988776
No 124
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.89 E-value=1.3e-07 Score=95.27 Aligned_cols=310 Identities=13% Similarity=0.008 Sum_probs=143.3
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCch-hhHHHHHHHHhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQ-TFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~-~~li~~R~i~G~g~g~~~~~~ 136 (479)
+...+...++......+.+++.|.++||+|.|+-++....+..+..+.+......+-. .-+.++-++.|+..+..+.+.
T Consensus 42 ~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~ 121 (412)
T PF01306_consen 42 GTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAG 121 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 3344444444444445556778899999997776655543333323333221000000 112344455555555544433
Q ss_pred hhhhhcCCCccch--HhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCcccc-
Q 011720 137 GAIMTSYPTATRK--GTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVI- 213 (479)
Q Consensus 137 ~~~i~e~~~~~~R--G~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~- 213 (479)
....-.++++-.| +.-.|=--+.-++|..++..+++.+... .+...+++.....++..++.++.+|+++..
T Consensus 122 ~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i------~p~~~fwi~s~~~~il~lll~~~~~~~~~~~ 195 (412)
T PF01306_consen 122 VPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNI------NPNIIFWIASAAAIILLLLLLLLKPDVPPQA 195 (412)
T ss_dssp HHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHSS---SSSSS
T ss_pred chHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeee------CccHHHHHHHHHHHHHHHHHHHcCCcCchhh
Confidence 3333222211111 1111212222345666666665544221 112233333333333333334444432211
Q ss_pred cCCCCcccccccCCHHHHHHHHHHHhhchHHHHHHHHHHHhhhhhh---cccccccccccc-----chhhhHHHHHHHHH
Q 011720 214 RDDGTRCTNIKYSKVSTEAIEILKLFRNWKMLLLFPAAWASNFFYS---YQFNNVNGLMFN-----LRTRGLNNVFYWGA 285 (479)
Q Consensus 214 r~d~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~s---~~~~~~~~~~f~-----~~~~~l~~~~~~i~ 285 (479)
+.++++ .+++ ...+.|+.++.+++|+++.+..........|. .+++.+....|+ .+..|+.+...-+.
T Consensus 196 ~~~~~~--~~~~--~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~ 271 (412)
T PF01306_consen 196 EVADAL--GAKK--DKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFL 271 (412)
T ss_dssp -SSTTS--SS--------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHH
T ss_pred hhhccc--ccCC--CCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHH
Confidence 111110 0111 11235677788899998876665444332221 122333322232 22335555566677
Q ss_pred HHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhH
Q 011720 286 QMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLD 365 (479)
Q Consensus 286 ~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 365 (479)
+++.-.+..++.+| +|-|+.++++..++. + =|++ .. +. ++.+.+.++-.+-++-.
T Consensus 272 E~~~m~~~p~li~r--ig~k~~Lllag~i~~-i---Ri~~-~~---------------~~---~~~~~i~~~klLH~~e~ 326 (412)
T PF01306_consen 272 EALMMFFSPWLINR--IGAKNLLLLAGVIMA-I---RIIG-SG---------------FA---TNPWVISLIKLLHALEF 326 (412)
T ss_dssp HHHHHHHHHHHHHH--H-HHHHHHHHHHHHH-H---HHHH-HH---------------T-----SHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh--cChHhHHHHHHHHHH-H---HHHH-Hh---------------hh---cchHHHHHHHHHHHHHH
Confidence 77777888888888 788887666543321 1 1211 11 11 23345666777777777
Q ss_pred HHHHHHHHHHHHHhcCCchhhhHHHHHH-HHHHHHHHHH
Q 011720 366 AMFQSMVYWVIGALADDSETLSRYTGFY-KGVQSAGAAV 403 (479)
Q Consensus 366 ~~~~~~~~~~~~~i~~~~~~r~~~~~~~-~~~~~~g~~i 403 (479)
+.......=|+.+.+ |.|..++...+. ++..++|..+
T Consensus 327 ~l~lva~fkYI~~~f-d~rlsAt~y~v~~~~~~~~~~~i 364 (412)
T PF01306_consen 327 PLLLVAAFKYITAHF-DKRLSATLYLVGFQFAKQIGIII 364 (412)
T ss_dssp HHHHHHHHHHHHHHS--GGGHHHHHHHHHTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CHhHHHHHHHHHHHHHHHHHHHH
Confidence 666666667899999 777766665553 3333444433
No 125
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.86 E-value=2.9e-07 Score=94.93 Aligned_cols=312 Identities=13% Similarity=0.056 Sum_probs=161.5
Q ss_pred hhhhhhhhhcc-----chhHHHhhhhHHHHHHHHHHHh-hhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCC--Ccc
Q 011720 76 GILGGGVYNIF-----GPRVTLAAGCSTYVLYAGSFLY-YNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYP--TAT 147 (479)
Q Consensus 76 ~l~~g~l~d~~-----Grk~~l~ig~~~~~i~~~~~~~-~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~--~~~ 147 (479)
-++.|.++|.+ .||+-++++.++-.+....+.. .+...+.+...+.=++.-+|....-...-+.+.|.. +|+
T Consensus 41 Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~ 120 (433)
T PF03092_consen 41 KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE 120 (433)
T ss_pred hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc
Confidence 47889999997 3666677777655432222222 212235566666778888888888888888888887 456
Q ss_pred chHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCcccccCCCCc-cccc---
Q 011720 148 RKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVIRDDGTR-CTNI--- 223 (479)
Q Consensus 148 ~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~r~d~~~-~~~~--- 223 (479)
.||...+..+....+|.++|..+++.+... .+.++ .+.+...+..+..+..+++.+|++.+++++.. ...+
T Consensus 121 ~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~----~~~~~-~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 195 (433)
T PF03092_consen 121 SRGDLQSFVWGVRSVGSLVGSLLSGPLLDS----FGPQG-VFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEEVP 195 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhhc----CCCeE-EehHHHHHHHHHHHHHHHhhhhccccccchhhcccccccc
Confidence 689999999999999999999888765432 12222 34444445555444555555553222111110 0001
Q ss_pred c-cCCHHHHHHHHHHHhhchHHHHHHH-HHHHhhhhhhc------ccccc--ccccccchhhhHHHHHHHHHHHHHHHHh
Q 011720 224 K-YSKVSTEAIEILKLFRNWKMLLLFP-AAWASNFFYSY------QFNNV--NGLMFNLRTRGLNNVFYWGAQMLGSVGI 293 (479)
Q Consensus 224 ~-~~~~~~~~~~~~~~~~~~r~ll~~~-~~~~~~~~~s~------~~~~~--~~~~f~~~~~~l~~~~~~i~~~i~~~~~ 293 (479)
. ....++..++.|+.+++|.++.... ..+........ ++.+. ....|+..-.+....+..++.++|..+.
T Consensus 196 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y 275 (433)
T PF03092_consen 196 CLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLY 275 (433)
T ss_pred hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0114555677777777766554333 22222211100 00000 0111444444555566667777777766
Q ss_pred hhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHH-hhHHHHHHHH
Q 011720 294 GYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYG-LLDAMFQSMV 372 (479)
Q Consensus 294 g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~ 372 (479)
.++.-+ +.-|+...+..... + .....-+.+...+... .+..+ . .....--++.. ...-.+.| .
T Consensus 276 ~~~~~~--~~~R~~~~~t~~~~--~--~~~l~~~~lv~~~n~~-----~Gi~d--~--~f~lgd~~l~~~~~~i~~mP-~ 339 (433)
T PF03092_consen 276 RKYFSN--WSWRRIFVVTTLVS--V--LASLFDLLLVTRWNLD-----LGIPD--Q--WFALGDTILEEVIGMIAFMP-S 339 (433)
T ss_pred HHHHhC--CCHHHHHHHHHHHH--H--HHhcccEEEEEEEeee-----eCcCC--e--EEEEEhHHHHHHHHHHHHHH-H
Confidence 655433 22333222221111 0 0100001111111100 00011 1 11111112222 22233333 4
Q ss_pred HHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 373 YWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 373 ~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
..+.+++. |++.-+..+++...+.++|..++..++.
T Consensus 340 lvl~a~lc-P~G~Egt~yall~s~~Nlg~~~s~~lg~ 375 (433)
T PF03092_consen 340 LVLAARLC-PKGSEGTVYALLASFSNLGSSVSSTLGA 375 (433)
T ss_pred HHHHHHHC-CCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44678888 7777789999999999999888877663
No 126
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.81 E-value=1.5e-06 Score=85.15 Aligned_cols=225 Identities=17% Similarity=0.132 Sum_probs=119.9
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh-hh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ-GA 138 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~-~~ 138 (479)
........-+....+...+.|.++||+|||+..++-++.|.+ ++++- ..++++.++++|++.|++.+...++- .=
T Consensus 70 qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~---scl~k-~~~~~~~L~~GRvlgGiaTSLLfS~FEsW 145 (354)
T PF05631_consen 70 QIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSL---SCLTK-HSSNYPVLLLGRVLGGIATSLLFSAFESW 145 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH---HHHHH-hccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444455566678899999999999999988888775 55544 57889999999999999999976644 44
Q ss_pred hhhcCCC----ccchHhHHHHHH-HHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCcccc
Q 011720 139 IMTSYPT----ATRKGTYISLFW-SIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVI 213 (479)
Q Consensus 139 ~i~e~~~----~~~RG~~~g~~~-~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~ 213 (479)
++.|.-. ++..+.-++... ....+-.+++++++-...... +..+-..|...+++.+++.++....-+|..-
T Consensus 146 ~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~---~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg- 221 (354)
T PF05631_consen 146 MVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF---GFGPVAPFDAAIVLLAVAAVLILKTWPENYG- 221 (354)
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh---CCCCcchHHHHHHHHHHHHHHHHhcccccCC-
Confidence 5667632 222222222211 111122233444433221110 1111123444444444443332222222211
Q ss_pred cCCCCcccccccCCHHHHHHHHHHHh-hchHHHHHHHHHHHh-hhhhhccc--cccccccccchhhhHHHHHHHHHHHHH
Q 011720 214 RDDGTRCTNIKYSKVSTEAIEILKLF-RNWKMLLLFPAAWAS-NFFYSYQF--NNVNGLMFNLRTRGLNNVFYWGAQMLG 289 (479)
Q Consensus 214 r~d~~~~~~~~~~~~~~~~~~~~~~~-~~~r~ll~~~~~~~~-~~~~s~~~--~~~~~~~f~~~~~~l~~~~~~i~~~i~ 289 (479)
|.+ ++.+..+.+++.++.. +|||++++-...... +-+|.+.+ ...+...-+.-.-|++...+.+..++|
T Consensus 222 --~~~-----~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlG 294 (354)
T PF05631_consen 222 --DTS-----SSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLG 294 (354)
T ss_pred --Ccc-----cccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHH
Confidence 100 1223334455555544 578987776554432 22344331 111110001112477888889999999
Q ss_pred HHHhhhhccc
Q 011720 290 SVGIGYVMDF 299 (479)
Q Consensus 290 ~~~~g~l~Dr 299 (479)
+.+..++..+
T Consensus 295 S~lf~~l~s~ 304 (354)
T PF05631_consen 295 SSLFSRLLSK 304 (354)
T ss_pred HHHHHHHHhC
Confidence 9988766644
No 127
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.72 E-value=1.3e-07 Score=96.47 Aligned_cols=128 Identities=15% Similarity=0.097 Sum_probs=94.5
Q ss_pred HHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccc
Q 011720 69 YTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATR 148 (479)
Q Consensus 69 ~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~ 148 (479)
..+..++.+..+.+.||+|||+.+.++.++..+...... ..++.+.+++.+++.|++.+...+.....+.+..|+++
T Consensus 268 ~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (408)
T PRK09874 268 GVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMS---FVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI 344 (408)
T ss_pred HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc
Confidence 344455667889999999999999988776554222221 23567888899999999999988888888888899999
Q ss_pred hHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHh
Q 011720 149 KGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLA 205 (479)
Q Consensus 149 RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~ 205 (479)
||+.++++.....+|..+|+++...+..+ .+|+ .|.+..++.+++.++..+
T Consensus 345 ~g~~~~~~~~~~~~g~~~gp~~~G~l~~~------~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 345 AGRIFSYNQSFRDIGNVTGPLMGAAISAN------YGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred ceeeehHHHHHHHHHHHhhHHHHHHHHhh------cchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998766421 2332 344445555555554443
No 128
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.71 E-value=1.8e-06 Score=88.99 Aligned_cols=296 Identities=14% Similarity=0.064 Sum_probs=165.2
Q ss_pred HHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhh--hhhhhhhhhhcCCCccchH
Q 011720 73 SVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGL--LWAGQGAIMTSYPTATRKG 150 (479)
Q Consensus 73 aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~--~~~~~~~~i~e~~~~~~RG 150 (479)
.+..++.|.++||+|||..+.+..+...+........ .+|.++ +.|+..+. .+....+|++|+++.++|.
T Consensus 76 ~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~----~~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 76 LISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ----GYWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred HHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH----HHHHhh----hcccccchhhhhhhhhhheeeccchhHHH
Confidence 4556788999999999999999988776643333332 244444 55555544 4556778999999999999
Q ss_pred hHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCcccccCCC--CcccccccCC-
Q 011720 151 TYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSRVIRDDG--TRCTNIKYSK- 227 (479)
Q Consensus 151 ~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~~~r~d~--~~~~~~~~~~- 227 (479)
...|+....+..+..+|+.++....... +. -..+.+..++.++..+...++.||+..++++. +..+......
T Consensus 148 ~~~gll~~~~~~~~~~~p~~~~~~~~~~----~~-a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~ 222 (463)
T KOG2816|consen 148 SSIGLLSGTFGAGLVIGPALGGYLVKFL----GI-ALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLD 222 (463)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhc----Cc-hHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCccc
Confidence 9999999989999999998887664321 11 12445556666666666677777765332211 1110000000
Q ss_pred ---HHHHHHHHHHHhhchHHHHHHHHHHHhhhhhhc----ccccccc--ccccchhhhHHHHHHHHHHHHHHHHhhhhcc
Q 011720 228 ---VSTEAIEILKLFRNWKMLLLFPAAWASNFFYSY----QFNNVNG--LMFNLRTRGLNNVFYWGAQMLGSVGIGYVMD 298 (479)
Q Consensus 228 ---~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~s~----~~~~~~~--~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~D 298 (479)
..+..+...+.-.+|..+.+....++..+.... ....+.. .+|+..+.+......++...++.++...+.-
T Consensus 223 ~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~ 302 (463)
T KOG2816|consen 223 SSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLS 302 (463)
T ss_pred chhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111122222211244444444444443332111 1112222 3456666665544555566666666654443
Q ss_pred ccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHH
Q 011720 299 FSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGA 378 (479)
Q Consensus 299 r~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 378 (479)
+. +|-|+....|..... ... .+. .+ . |.. +. ...............+...+..+.
T Consensus 303 ~~-l~~~~~i~lGl~~~~-~~~-~~~---af----~---------~~~-----w~-~~~~~v~~~~~~~~~pa~~s~~s~ 357 (463)
T KOG2816|consen 303 SI-LGEKRLISLGLLSEF-LQL-LLF---AF----A---------TET-----WM-MFAAGVVVALAGIVFPAIRAFASI 357 (463)
T ss_pred HH-HhhhhHhhHHHHHHH-HHH-HHH---HH----h---------ccc-----hh-hhHHHHHHHhhcchhHHHHhHHHh
Confidence 32 455554444543321 222 221 11 1 111 11 111222333344455656677777
Q ss_pred hcCCchhhhHHHHHHHHHHHHHHHHHhhh
Q 011720 379 LADDSETLSRYTGFYKGVQSAGAAVAWQV 407 (479)
Q Consensus 379 i~~~~~~r~~~~~~~~~~~~~g~~i~~~~ 407 (479)
+. +++++++.+++...+++++..++..+
T Consensus 358 ~v-~~~e~g~v~~~is~i~~l~~~~~~~~ 385 (463)
T KOG2816|consen 358 LV-SPEEQGKVFGIISGIEGLSGVVSPAL 385 (463)
T ss_pred hc-ccccccchhhHHHHHHHHhhhhhHHH
Confidence 77 78899999999999998888887554
No 129
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.69 E-value=2.7e-07 Score=94.01 Aligned_cols=108 Identities=14% Similarity=0.158 Sum_probs=84.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCC
Q 011720 65 NTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYP 144 (479)
Q Consensus 65 ~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~ 144 (479)
.+....+..++.++.+++.||+|||+.+.++..+..+..... . ..++.+.+++++++.|++.+..++.......|..
T Consensus 255 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~ 331 (399)
T PRK05122 255 LTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLL--W-LAPSPWMALIGAALTGFGFSLVFPALGVEAVKRV 331 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH--H-HhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC
Confidence 344455566778999999999999999888876655422221 1 2456777888999999999988877777778889
Q ss_pred CccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 145 TATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 145 ~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
|+++||+..|++.....+|..+++.+...+.
T Consensus 332 ~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 362 (399)
T PRK05122 332 PPQNRGAALGAYSVFLDLSLGITGPLAGLVA 362 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988887765553
No 130
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.69 E-value=5.3e-07 Score=91.89 Aligned_cols=112 Identities=13% Similarity=0.090 Sum_probs=83.3
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
..+...+.......++.++.|+++||+|||+.+..+.+...+...... ..++.+.+++.|++.+++.|...+....+
T Consensus 253 ~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~l~~~~~g~~~~~~~~~ 329 (393)
T PRK15011 253 LAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGML---MAHSPAILLGLQLLNAIYIGILGGIGMLY 329 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444555566789999999999999988877654443221111 23567778889999999888877777778
Q ss_pred hhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 140 MTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
..|..| ++||+.+++++...++|..+|+.++..+.
T Consensus 330 ~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~ 364 (393)
T PRK15011 330 FQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVA 364 (393)
T ss_pred HHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889876 56999999999999999999999887653
No 131
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.68 E-value=3.5e-07 Score=90.55 Aligned_cols=115 Identities=20% Similarity=0.206 Sum_probs=95.1
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhH-HHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRV-TLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~-~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
+...+...+.......++.++.+++.||+|||+ .+.++.++..+...... ..++.+.+++..++.|++.+..++..
T Consensus 210 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~ 286 (352)
T cd06174 210 AAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA---LAPSLALLLVALLLLGFGLGFAFPAL 286 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHHHhccchhH
Confidence 344445556666777788899999999999999 88888887666332222 24567888999999999999999999
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
..++.|..|+++|++.++++.....+|..+++.+...+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~ 325 (352)
T cd06174 287 LTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLL 325 (352)
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999887664
No 132
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.68 E-value=3.1e-07 Score=93.81 Aligned_cols=114 Identities=13% Similarity=0.046 Sum_probs=87.8
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhh
Q 011720 59 TAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGA 138 (479)
Q Consensus 59 ~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~ 138 (479)
...+...+....+..++.++.|++.||+|||+.+.++.+...+..... . ..++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 331 (406)
T PRK11551 255 SQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAAL--A-AAPSFAGMLLAGFAAGLFVVGGQSVLYA 331 (406)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH--H-hcCcHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 334445556666677888999999999999999887655443321111 1 2346677777888889888777777778
Q ss_pred hhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 139 IMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 139 ~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
+..|..|+++||+..|++.....+|..+|+.+...+.
T Consensus 332 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 368 (406)
T PRK11551 332 LAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLL 368 (406)
T ss_pred HHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhh
Confidence 8899999999999999999999999999999887664
No 133
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.67 E-value=7.4e-07 Score=91.50 Aligned_cols=113 Identities=12% Similarity=0.035 Sum_probs=86.6
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
..+...+....+..++.++.+++.||.++|+.+.++.++..+.... . ...++.+.+.++.++.|++.+...+...++
T Consensus 260 ~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 336 (417)
T PRK10489 260 QIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGL--F-GLMPMWILAVLCLALFGYLSAISSLLQYTL 336 (417)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHH--H-HccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555566677888999999988888888777655542222 1 134566777888999999998877777788
Q ss_pred hhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 140 MTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
+.|..|++.||+.+|++....++|..+|+.+...+.
T Consensus 337 ~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~ 372 (417)
T PRK10489 337 LQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLG 372 (417)
T ss_pred HHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHH
Confidence 899999999999999999999999999999887664
No 134
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.62 E-value=7.2e-07 Score=83.64 Aligned_cols=160 Identities=17% Similarity=0.138 Sum_probs=113.5
Q ss_pred hcCCCCccccccchhHHHHHHHHHHhhhhhhhhhhh-cC-CCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhH
Q 011720 13 QISPKYSLFRYNSPLVQVSLIGLVCFCCPGMFNALS-GM-GGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRV 90 (479)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-~l-~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~ 90 (479)
|.||.++.+-+.+++..+.+++++....-.-+.+.. .+ ...-..++...+..++..|+..++.+++.|.++|++||+.
T Consensus 252 e~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~ 331 (459)
T KOG4686|consen 252 EEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL 331 (459)
T ss_pred CCcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee
Confidence 567777778888888877777765443311111111 00 0111123344556788999999999999999999999998
Q ss_pred HHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHH
Q 011720 91 TLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLI 170 (479)
Q Consensus 91 ~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i 170 (479)
..+.+..+-.+..=+.+. -+.+.-+.+-.+.|+..+....+--..++.+.|+++.|.+.|..++..++|..+-+++
T Consensus 332 ~wv~~a~~~tl~~H~~l~----Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Ii 407 (459)
T KOG4686|consen 332 WWVASACILTLLGHSGLF----FTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPII 407 (459)
T ss_pred hhHHHHHHHHHHHhhhHH----hhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhh
Confidence 888887765542222222 2356668889999999988755556677777899999999999999999999999999
Q ss_pred Hhhhhh
Q 011720 171 PFIMNY 176 (479)
Q Consensus 171 ~~~i~~ 176 (479)
...+.-
T Consensus 408 ag~i~d 413 (459)
T KOG4686|consen 408 AGFIAD 413 (459)
T ss_pred hheeec
Confidence 886643
No 135
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.58 E-value=7.7e-07 Score=91.50 Aligned_cols=138 Identities=11% Similarity=-0.019 Sum_probs=97.7
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhh
Q 011720 61 ANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIM 140 (479)
Q Consensus 61 ~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i 140 (479)
.+...++......++.+++|++.||+|||+.+.++.+++.+.... .. .+++.+.+++.+++.|++.+...+....++
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l--~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 340 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIG--SG-FATGPLEVSILKLLHAFEVPFLLVGVFKYI 340 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHH--HH-hcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555666788899999999999999998888876653222 22 356788889999999999988877777888
Q ss_pred hcCCCccchHhHHHH-HHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhcc
Q 011720 141 TSYPTATRKGTYISL-FWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAIL 207 (479)
Q Consensus 141 ~e~~~~~~RG~~~g~-~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~ 207 (479)
.|..|++.|+...+. ++....+|.++|+.+...+... .+|+ .|.+..++.++..++.+++.
T Consensus 341 ~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~------~G~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 341 TLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS------IGFQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred HHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh------hCchHHHHHHHHHHHHHHHHHHHHh
Confidence 898899999887655 6677789999999887655321 2343 34444444444444444443
No 136
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.57 E-value=1.1e-06 Score=89.22 Aligned_cols=133 Identities=5% Similarity=-0.104 Sum_probs=98.7
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
+...+...++......++.++++.+.||+|+|+.+.++.+...+.... . ..++|.+.+++.++++|++.+..+++..
T Consensus 239 ~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~--~-~~~~~~~~~~~~q~l~g~~~~~~~~~~~ 315 (382)
T TIGR00902 239 ASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAI--I-GAIEAFPLIFLLQILHCGTFAVCHLAAM 315 (382)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHH--H-HhHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444445556788999999999999999998877663222 2 2357889999999999999999999999
Q ss_pred hhhhcCCCccchHhHHHHHH-HHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHH
Q 011720 138 AIMTSYPTATRKGTYISLFW-SIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGA 200 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~-~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~ 200 (479)
.++.+. |+++|++..++++ ....+|..+|+.++..+..+ .+...|+....+.+++.
T Consensus 316 ~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~------~g~~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 316 RYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT------LGAGTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------ccHHHHHHHHHHHHHHH
Confidence 999988 9999999999987 45788999999998876422 33455655555555443
No 137
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.55 E-value=8.9e-07 Score=88.70 Aligned_cols=115 Identities=10% Similarity=0.029 Sum_probs=86.8
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
......++......++.++.+++.||+|||+.+.++.++..+......... ..+...++...++.|++.+...+..+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~~~ 319 (377)
T TIGR00890 241 FLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIP-MLNDVLFLATVALVFFTWGGTISLFPSL 319 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcc-cchhHHHHHHHHHHHHHhccchhccHHH
Confidence 334445556666778889999999999999999888776655322222211 1122345567888899888877777788
Q ss_pred hhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 140 MTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
+.|..|+++||+..|++.....+|..+|+.+...+.
T Consensus 320 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 355 (377)
T TIGR00890 320 VSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHAL 355 (377)
T ss_pred HHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998877653
No 138
>PRK10504 putative transporter; Provisional
Probab=98.53 E-value=2e-06 Score=89.72 Aligned_cols=112 Identities=13% Similarity=-0.007 Sum_probs=81.8
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhc
Q 011720 63 NANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTS 142 (479)
Q Consensus 63 ~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e 142 (479)
...........++.++.+++.||+|||+.+.++.++..+...........++.+.+.+.-++.|++.+...+....++.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 380 (471)
T PRK10504 301 LMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLK 380 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333344455789999999999999998888666533332222112334445566778889999888888888889
Q ss_pred CCCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 143 YPTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 143 ~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
..|+++||...+++.....+|..+|+.+...+
T Consensus 381 ~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~l 412 (471)
T PRK10504 381 DLPDNLASSGNSLLSMIMQLSMSIGVTIAGLL 412 (471)
T ss_pred cCCHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998876644
No 139
>PRK12382 putative transporter; Provisional
Probab=98.53 E-value=9.6e-07 Score=89.83 Aligned_cols=107 Identities=16% Similarity=0.163 Sum_probs=85.2
Q ss_pred HHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCC
Q 011720 66 TALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPT 145 (479)
Q Consensus 66 ~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~ 145 (479)
.....+..++.++.+.+.||+|||+.+.++..+..+.... .. ..++.+.+++.+++.|++.+...+.....+.|..|
T Consensus 256 ~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 332 (392)
T PRK12382 256 TAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLL--LW-LAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVP 332 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHH--HH-HcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC
Confidence 3334445667899999999999999998887766553222 21 24567778889999999999887777788888899
Q ss_pred ccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 146 ATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 146 ~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
+++||+..|+++....+|..+|+.+...+.
T Consensus 333 ~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~ 362 (392)
T PRK12382 333 SQVRGTALGGYAAFQDIAYGVSGPLAGMLA 362 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998877654
No 140
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.51 E-value=1.9e-06 Score=90.03 Aligned_cols=118 Identities=14% Similarity=-0.007 Sum_probs=79.7
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+....+..++.+++|+++||+|||+.+.++.....+........ ..++...+++.+++.|+.........
T Consensus 292 s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~~~~~~~~~~ 370 (467)
T PRK09556 292 SKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQ-HATSEYMYLASLFALGFLVFGPQLLI 370 (467)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHhhHHHHH
Confidence 34444555566777788899999999999999988766544333211111111 23456667788888886543333333
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHh-hhhhhhHHHhhhh
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNM-GGVVGGLIPFIMN 175 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~-G~~iG~~i~~~i~ 175 (479)
+....|..|++.||++.|+.....++ |..+++.+...+.
T Consensus 371 ~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~ 410 (467)
T PRK09556 371 GVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIA 410 (467)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHh
Confidence 45667999999999999999888775 6677777666553
No 141
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.50 E-value=1.6e-06 Score=87.45 Aligned_cols=116 Identities=16% Similarity=0.017 Sum_probs=83.9
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHH-hhhccCchhhHHHHHHHHhhhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFL-YYNHHHDQTFAVVAGAVLGIGAGLLWAGQGA 138 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~-~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~ 138 (479)
......+.......++.++.++++||+|||+.+.++..+..+...... .....++.+.++...++.|++.+..++....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 335 (394)
T TIGR00883 256 SALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGS 335 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHH
Confidence 344445555666777889999999999999988766544333211111 1111245677788889999999888888889
Q ss_pred hhhcCCCccchHhHHHH-HHHHHHhhhhhhhHHHhhhh
Q 011720 139 IMTSYPTATRKGTYISL-FWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 139 ~i~e~~~~~~RG~~~g~-~~~~~~~G~~iG~~i~~~i~ 175 (479)
++.|..|+++|++..++ +.....+|..+||.+...+.
T Consensus 336 ~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~ 373 (394)
T TIGR00883 336 FLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALV 373 (394)
T ss_pred HHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHH
Confidence 99999999999999998 45556788888888877654
No 142
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.47 E-value=2.1e-06 Score=88.24 Aligned_cols=115 Identities=13% Similarity=0.108 Sum_probs=75.4
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhh--hhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGA--GLLWAG 135 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~--g~~~~~ 135 (479)
+.......+....+..++.++.+.+.||+|||+.+..+.++..+........ ..++. ....-++.|++. ......
T Consensus 265 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~ 341 (426)
T PRK12307 265 TGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRI-PQDNY--LLLGACLFGLMATNVGVGGL 341 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH-ccccH--HHHHHHHHHHHHhcccHhHH
Confidence 3344444555556677788999999999999999888876544422222111 11122 222223333332 222344
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
.+.++.|..|+++||+.+|+......+|..+|+.+...+.
T Consensus 342 ~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~ 381 (426)
T PRK12307 342 VPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLG 381 (426)
T ss_pred HHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHH
Confidence 5677889999999999999999999999999999876654
No 143
>PRK09952 shikimate transporter; Provisional
Probab=98.47 E-value=3.5e-06 Score=87.22 Aligned_cols=104 Identities=13% Similarity=0.010 Sum_probs=73.0
Q ss_pred HHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhh-hccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccch
Q 011720 71 TFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYY-NHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRK 149 (479)
Q Consensus 71 ~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~-~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~R 149 (479)
...++.++.|+++||+|||+.+.++.++..+........ ...++.+.+++.-++.|++.+..++...+++.|..|++.|
T Consensus 298 ~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r 377 (438)
T PRK09952 298 LSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYR 377 (438)
T ss_pred HHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchh
Confidence 345667889999999999999888766443322222111 1112344455667777888888877888899999999999
Q ss_pred HhHHHHHH-HHHHhhhhhhhHHHhhh
Q 011720 150 GTYISLFW-SIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 150 G~~~g~~~-~~~~~G~~iG~~i~~~i 174 (479)
+...++-+ ....+|..++|.+...+
T Consensus 378 ~tg~g~~~~~~~~lgg~~~p~i~g~l 403 (438)
T PRK09952 378 YSGAGVGYQVASVVGGGFTPFIAAAL 403 (438)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 98888854 34457888888877655
No 144
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.45 E-value=4.7e-06 Score=83.81 Aligned_cols=105 Identities=15% Similarity=0.108 Sum_probs=79.1
Q ss_pred HHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCc
Q 011720 67 ALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTA 146 (479)
Q Consensus 67 ~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~ 146 (479)
.......++.++++++.||+|||+.+.++.++..+...... ..++.+.+++.+++.|++.+...+....++.|..|
T Consensus 243 ~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~- 318 (375)
T TIGR00899 243 TAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLA---ADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMP- 318 (375)
T ss_pred HHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-
Confidence 33333455678899999999999998887665443222211 13467778889999999999887777778888875
Q ss_pred cchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 147 TRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 147 ~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
++|++.++++....++|..+|+.+...+.
T Consensus 319 ~~~~~~~~~~~~~~~~g~~~g~~~~g~~~ 347 (375)
T TIGR00899 319 GRAGAATTLYTNTGRVGWIIAGSVGGILA 347 (375)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999998877653
No 145
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.45 E-value=3.5e-06 Score=89.76 Aligned_cols=60 Identities=17% Similarity=0.256 Sum_probs=55.7
Q ss_pred hHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhh
Q 011720 117 FAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNY 176 (479)
Q Consensus 117 ~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~ 176 (479)
+++++-++.|+|....++-..+|+.|...+++-..++|+.+++..+|+++|.+++..++.
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~ 298 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLK 298 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 568899999999999999999999999999999999999999999999999999887653
No 146
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.43 E-value=2.3e-06 Score=88.55 Aligned_cols=144 Identities=13% Similarity=0.000 Sum_probs=87.1
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHh--hhccC------chhhHHHHHHHHhhhhhh-
Q 011720 61 ANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLY--YNHHH------DQTFAVVAGAVLGIGAGL- 131 (479)
Q Consensus 61 ~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~--~~~~~------~~~~li~~R~i~G~g~g~- 131 (479)
.............++.+++++++||+|||+.+.++.++..+....... ..... +...+....++ +.+.+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 399 (481)
T TIGR00879 321 AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLF-IAFFAMG 399 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHH-HHHHHcc
Confidence 334444555666778899999999999999998887655543222221 10111 22222223332 333332
Q ss_pred hhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCc
Q 011720 132 LWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPS 210 (479)
Q Consensus 132 ~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~ 210 (479)
..+....++.|..|+++||+.+++.....++|..+++.+...+..+ .++.+ .|++..++.+++.++.+++.||.
T Consensus 400 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~----~~~~~-~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 400 WGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES----IGVGG-VFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred ccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCccc-eehhHHHHHHHHHHHHheecccC
Confidence 2344556678999999999999999999999999999876654321 12222 34444555555555555555543
No 147
>TIGR00898 2A0119 cation transport protein.
Probab=98.43 E-value=9.3e-06 Score=85.56 Aligned_cols=100 Identities=8% Similarity=-0.002 Sum_probs=76.7
Q ss_pred HHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHh
Q 011720 72 FSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGT 151 (479)
Q Consensus 72 ~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~ 151 (479)
...+.++.+.+.||+|||+.+.++.++..+........ ...+.+..++.-++.+++.+..++....+..|..|++.|++
T Consensus 368 ~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 446 (505)
T TIGR00898 368 ELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFV-PVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNL 446 (505)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhh
Confidence 34567889999999999999999887655532222221 11222455666677777777777788889999999999999
Q ss_pred HHHHHHHHHHhhhhhhhHHHh
Q 011720 152 YISLFWSIFNMGGVVGGLIPF 172 (479)
Q Consensus 152 ~~g~~~~~~~~G~~iG~~i~~ 172 (479)
.+|+......+|.+++|.+..
T Consensus 447 ~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 447 GVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred hHhHHHHHHHHHHHHHhHHHH
Confidence 999999999999999998876
No 148
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.41 E-value=5.8e-06 Score=86.37 Aligned_cols=144 Identities=10% Similarity=0.042 Sum_probs=86.0
Q ss_pred HHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchh-hHHHHHHHHhhhhhhhh-hhhhhhhhcCC
Q 011720 67 ALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQT-FAVVAGAVLGIGAGLLW-AGQGAIMTSYP 144 (479)
Q Consensus 67 ~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~-~li~~R~i~G~g~g~~~-~~~~~~i~e~~ 144 (479)
.......++.+++++++||+|||+.++++.++..+....+......+..+ ..+.+-++.+++.+..+ +....++.|..
T Consensus 314 ~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 393 (479)
T PRK10077 314 IVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIF 393 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhC
Confidence 34445567789999999999999999999887666333322211111111 22333344444444433 45678889999
Q ss_pred CccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccc-hhHHHHHHHHHHHHHHHHhccCCc
Q 011720 145 TATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVND-KTYIAFMCFMSAGAALSLAILPPS 210 (479)
Q Consensus 145 ~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~-~~~~i~~~l~~l~~~l~~~~~~~~ 210 (479)
|+++||+.+|+......+|.++++.+...+..........+| ..+.++.++.++..++..++.||+
T Consensus 394 p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 460 (479)
T PRK10077 394 PNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPET 460 (479)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccC
Confidence 999999999999999999999987665433200000011223 234444444455444444444443
No 149
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.40 E-value=8.6e-06 Score=83.04 Aligned_cols=114 Identities=9% Similarity=-0.004 Sum_probs=78.2
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
+...+...+....+..++.++.+++.||+|||+.+.++..+..+........ .++...+. -++.|++.+...+...
T Consensus 239 ~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~--~~l~g~g~g~~~~~~~ 314 (393)
T PRK09705 239 AQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWL--PLQLPVLW--AMVCGLGLGGAFPLCL 314 (393)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHc--cchHHHHH--HHHHHHhccchHHHHH
Confidence 4444455566666678889999999999999999888876554422222211 12222222 2466888777666555
Q ss_pred hhhhcCC-CccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 138 AIMTSYP-TATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 138 ~~i~e~~-~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
....+.. |+++||+.+|+.+....++..+|+.+...+.
T Consensus 315 ~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~ 353 (393)
T PRK09705 315 LLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLR 353 (393)
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555 4688999999999999999999998877664
No 150
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.39 E-value=2e-06 Score=89.60 Aligned_cols=116 Identities=13% Similarity=-0.023 Sum_probs=83.8
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhc--cchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNI--FGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~--~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
+.......++...+..++.++++.++|| +++|+...++...........+. ...++.+.+++.+++.|++.+..++.
T Consensus 275 ~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~-~~~~~~~~~~i~~~~~G~~~g~~~~~ 353 (455)
T TIGR00892 275 EYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLC-ALAGDYTGLVIYCIFFGLSFGSVGAL 353 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHH-HHhchHHHHHHHHHHHHHHhchHHHH
Confidence 4444455555556666677888999997 34454444433222211111122 23467888899999999999998888
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
...++.|..|+++||+.+|++....++|.++|+.+...+
T Consensus 354 ~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l 392 (455)
T TIGR00892 354 LFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRL 392 (455)
T ss_pred HHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeee
Confidence 888999999999999999999999999999999887755
No 151
>TIGR00895 2A0115 benzoate transport.
Probab=98.38 E-value=3.2e-06 Score=85.40 Aligned_cols=113 Identities=18% Similarity=0.123 Sum_probs=85.2
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
+...+...+....+..++.++.+++.||+|||+.+....+ ..+....... ...+.+.+++..++.|++.+...+...
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~ 360 (398)
T TIGR00895 284 LSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLL-GAVFAVLVGS--TLFSPTLLLLLGAIAGFFVNGGQSGLY 360 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH-HHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455566667778889999999999999954443333 2221111111 134667778889999999999888889
Q ss_pred hhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhh
Q 011720 138 AIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFI 173 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~ 173 (479)
.++.|..|+++||+.+|++.....+|..+|+.+...
T Consensus 361 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 361 ALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 999999999999999999999999999999987653
No 152
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.37 E-value=3e-06 Score=88.94 Aligned_cols=118 Identities=10% Similarity=0.032 Sum_probs=82.6
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...+....+..++++++|+++||+|||+.+.++.++..+........ ...+.+.+.+..++.|+......+..
T Consensus 309 ~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (496)
T PRK03893 309 DPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI-GGANVWVLGLLLFFQQMLGQGISGLL 387 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc-cccHHHHHHHHHHHHHHHhcccchhh
Confidence 34445555666677778889999999999999999888766544422221111 12333444455555444333344566
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
+.++.|..|+++||+.+|+++....+|..+|+++...+.
T Consensus 388 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~ 426 (496)
T PRK03893 388 PKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIA 426 (496)
T ss_pred HHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHh
Confidence 778889999999999999999999999999999887664
No 153
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.36 E-value=7.6e-06 Score=83.01 Aligned_cols=110 Identities=5% Similarity=-0.084 Sum_probs=82.6
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhh
Q 011720 62 NNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMT 141 (479)
Q Consensus 62 ~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~ 141 (479)
+...++......+..++.+.+.||+|+|+.+.++.+...+.... .. ..++.+.+++..++.|++.+...+....++.
T Consensus 243 g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 319 (382)
T PRK11128 243 GYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGL--MG-STTALPWLIVIQILHCGTFTVCHLAAMRYIA 319 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH--HH-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444445556688999999999999999888776652222 22 3567888899999999999998888888888
Q ss_pred cCCCccchHhHHHHHH-HHHHhhhhhhhHHHhhhh
Q 011720 142 SYPTATRKGTYISLFW-SIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 142 e~~~~~~RG~~~g~~~-~~~~~G~~iG~~i~~~i~ 175 (479)
+. +++++++..+++. .....|..+|+.++..+.
T Consensus 320 ~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~ 353 (382)
T PRK11128 320 AR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLY 353 (382)
T ss_pred HC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 86 5677899999886 445777788998887664
No 154
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.36 E-value=1.5e-06 Score=89.23 Aligned_cols=113 Identities=9% Similarity=0.095 Sum_probs=81.6
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCC
Q 011720 270 FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGN 349 (479)
Q Consensus 270 f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (479)
.+..+.++....+.++..++.++.|++.|| +|||+....+.....+.. .. .. + . +
T Consensus 40 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr--~G~r~~~~~~~~~~~~~~-~~----~~----~------------~--~ 94 (412)
T TIGR02332 40 LSATMFGLAATLFYAAYVICGIPSNIMLAI--IGARRWIAGIMVLWGIAS-TA----TM----F------------A--T 94 (412)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHHHHH--hChHHHHHHHHHHHHHHH-HH----HH----H------------h--c
Confidence 455567788788889999999999999999 789986655543321111 11 10 0 1 2
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 350 DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
++....+.-++.|++.+...+....++.|.+ |+++|+++.+++....++|..++..+.
T Consensus 95 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~-~~~~rg~~~~~~~~~~~~g~~~~~~~~ 152 (412)
T TIGR02332 95 GPESLYLLRILVGIAEAGFLPGILLYLTFWF-PAYFRARANALFMIAMPVTMALGLILS 152 (412)
T ss_pred CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2344556667889998888887777889999 788999999999998888888876664
No 155
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.35 E-value=3.7e-06 Score=84.55 Aligned_cols=114 Identities=14% Similarity=0.170 Sum_probs=84.1
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCC
Q 011720 270 FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGN 349 (479)
Q Consensus 270 f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (479)
.+..+.++....+.++..++.++.|++.|| +|||+....+.....+.. .. ..+ . +
T Consensus 26 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~--~g~r~~~~~~~~~~~~~~-~~----~~~----------------~--~ 80 (399)
T TIGR00893 26 LSAAQYGYVFSAFSWGYVVGQFPGGWLLDR--FGARKTLAVFIVIWGVFT-GL----QAF----------------A--G 80 (399)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhHHHHHHh--cCcceeeHHHHHHHHHHH-HH----HHH----------------H--c
Confidence 355566788888999999999999999999 679987766644322111 11 100 1 2
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 350 DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
++....+..++.|++.+...+....++.|.+ |+++|+++.++.....++|..++..+..
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 139 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWF-PASERATAVSIFNSAQGLGGIIGGPLVG 139 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhC-CHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 3445566677888888888887888899999 7889999999999999999888866553
No 156
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.34 E-value=1e-05 Score=84.30 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=89.4
Q ss_pred HHHHHHHHhhhhhhhhhhccchh--HHHhhhhHHHHHHHHHHHh---hh--ccCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 67 ALYTTFSVFGILGGGVYNIFGPR--VTLAAGCSTYVLYAGSFLY---YN--HHHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 67 ~~~~~~aig~l~~g~l~d~~Grk--~~l~ig~~~~~i~~~~~~~---~~--~~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
+......+|+++.|++.||+|.| +++.++.+.+.+.....+. .+ ..++.+.+++..++.|+..|..++..-++
T Consensus 325 ~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~ 404 (477)
T PF11700_consen 325 VVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSL 404 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 34455677889999999999999 8888888776442111111 00 13678889999999999999999999999
Q ss_pred hhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhc
Q 011720 140 MTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYH 177 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~ 177 (479)
.+|+.|+++.+..+|+|...-.....+||++...+...
T Consensus 405 ~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~ 442 (477)
T PF11700_consen 405 FSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDA 442 (477)
T ss_pred HHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999987766543
No 157
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.32 E-value=7.6e-06 Score=83.00 Aligned_cols=116 Identities=12% Similarity=0.079 Sum_probs=88.1
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
+...+...+....+..++.++.+++.||+|||+.+.++.+...+....... ..++.+.+.++.++.|+..+..++..+
T Consensus 273 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (405)
T TIGR00891 273 PHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFA--IGANVAVLGLGLFFQQMLVQGIWGILP 350 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHH--hCCchHHHHHHHHHHHHHHccchhhHH
Confidence 333444455566667788899999999999999998887654332122111 234566777777888887777777778
Q ss_pred hhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 138 AIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
.++.|..|+++||+.+|+.+....+|..+|+.+...+.
T Consensus 351 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~ 388 (405)
T TIGR00891 351 KHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLA 388 (405)
T ss_pred HHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999887664
No 158
>PRK03699 putative transporter; Provisional
Probab=98.32 E-value=8.6e-06 Score=83.01 Aligned_cols=114 Identities=10% Similarity=0.087 Sum_probs=83.4
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
+...+...+....+..++.++.+.++||+|||+.+.....+..+. ..+.. ..++.+.+.+..++.|++.+..++...
T Consensus 240 ~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~G~~~~~~~~~~~ 316 (394)
T PRK03699 240 LEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVL--MYLFV-NTDDPSHLLYAILGLGFFSSAIYTTII 316 (394)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHH--HHHHH-HcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 444455566677778899999999999999999888776654432 11211 245666677788889998887777766
Q ss_pred hhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 138 AIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
.+..|..| +++++..+.......+|..+||.+...+.
T Consensus 317 ~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~ 353 (394)
T PRK03699 317 TLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIV 353 (394)
T ss_pred HHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 67777654 55778888888888999999998877664
No 159
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.31 E-value=1.1e-07 Score=100.37 Aligned_cols=60 Identities=17% Similarity=0.262 Sum_probs=3.0
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 116 TFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 116 ~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
..++++.++.|+|+...++...+|+.|..++++-+.++|++.+...+|+.+|.+++..+.
T Consensus 142 ~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 142 YVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp ----------SSS-----------------------------------------------
T ss_pred HHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999999999999999999988876543
No 160
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.31 E-value=6.5e-05 Score=78.99 Aligned_cols=135 Identities=13% Similarity=-0.021 Sum_probs=86.6
Q ss_pred HHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhc-cCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCC
Q 011720 67 ALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNH-HHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPT 145 (479)
Q Consensus 67 ~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~-~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~ 145 (479)
....+..++.+++|+++||+|||+.+.++.++..+....+..... .++.+.+.+.-++..+..|...++..++..++.+
T Consensus 267 ~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~ 346 (491)
T PRK11010 267 LGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCN 346 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 334566788999999999999998887766544432222221111 2345555556666565566555566678888999
Q ss_pred ccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhcc
Q 011720 146 ATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAIL 207 (479)
Q Consensus 146 ~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~ 207 (479)
++.+++..++.++...+|..+++.+...+.. ..+|. .|.+..++.+++.++..+++
T Consensus 347 ~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~------~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 347 KSFSATQFALLSALSAVGRVYVGPVAGWFVE------AHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998877766555432 13454 34444444555544444443
No 161
>PRK03545 putative arabinose transporter; Provisional
Probab=98.31 E-value=2.5e-05 Score=79.40 Aligned_cols=138 Identities=14% Similarity=0.047 Sum_probs=89.3
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhh
Q 011720 59 TAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGA 138 (479)
Q Consensus 59 ~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~ 138 (479)
.......+....+..++.++.+++.||+|||..+ ++..+..+ .........++.+.+++..++.|++.+...+....
T Consensus 241 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~--~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 317 (390)
T PRK03545 241 NFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLV--CLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQV 317 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHH--HHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHH
Confidence 3344444455556677889999999999988754 44333222 11111112456778888999999998766555666
Q ss_pred hhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhc
Q 011720 139 IMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAI 206 (479)
Q Consensus 139 ~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~ 206 (479)
.+.+..| ++||+++|++....++|..+|+.+...+..+ .+++ .+.....+..++.++..+.
T Consensus 318 ~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 318 KVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH------LGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------cChhHHHHHHHHHHHHHHHHHHHH
Confidence 7777755 6899999999999999999999987766421 3332 3344444445544444433
No 162
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.30 E-value=2e-05 Score=81.53 Aligned_cols=117 Identities=11% Similarity=-0.030 Sum_probs=70.6
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhcc--c-hhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIF--G-PRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWA 134 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~--G-rk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~ 134 (479)
+...+...+....+..++.+++|+++||+ + ||+......+...+........ ...+...+.+..+..|++......
T Consensus 278 ~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~ 356 (434)
T PRK11663 278 LVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLM-PFASYVMQAACFFTIGFFVFGPQM 356 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHc-ccccHHHHHHHHHHHHHHHhhHHH
Confidence 33445556667777888999999999999 3 3333222211111111121111 122333334444444543322222
Q ss_pred hhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 135 GQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 135 ~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
....+..|..|+++||+.+|+.+...++|..+||.+...+.
T Consensus 357 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~ 397 (434)
T PRK11663 357 LIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVL 397 (434)
T ss_pred HHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHH
Confidence 33456779999999999999999999999999998876553
No 163
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.29 E-value=1e-05 Score=84.61 Aligned_cols=119 Identities=13% Similarity=0.047 Sum_probs=89.0
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHH-hhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFL-YYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~-~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
++...+........+..++.++++++.||+|||+.+.++.++..+...... ......+.+.++..-++.|+|.+...+.
T Consensus 289 s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~ 368 (485)
T TIGR00711 289 TALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMP 368 (485)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555556666778889999999999999999888876655322222 1111234566777889999999988766
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
......+..|+++||++.+++.....+|..+|+.+...+.
T Consensus 369 ~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~ 408 (485)
T TIGR00711 369 LTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTIL 408 (485)
T ss_pred HHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666677789999999999999999999999988876553
No 164
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.28 E-value=2.3e-05 Score=80.83 Aligned_cols=109 Identities=15% Similarity=0.131 Sum_probs=83.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCC
Q 011720 65 NTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYP 144 (479)
Q Consensus 65 ~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~ 144 (479)
.++......++.++.++++||+|||+.+.++.++..+........ .++.+.+++..++.|++.+...+...++++|..
T Consensus 263 ~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 340 (437)
T TIGR00792 263 GSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA--GSNLPLILVLIILAGFGQNFVTGLVWALVADTV 340 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 344455566778899999999999999999887665532222221 245667788889999999988888888888876
Q ss_pred C-------ccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 145 T-------ATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 145 ~-------~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
| ++++|...|++.....+|..+|+.+...+.
T Consensus 341 ~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll 378 (437)
T TIGR00792 341 DYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLIL 378 (437)
T ss_pred hhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 556899999999999999999988776553
No 165
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.28 E-value=3.2e-05 Score=78.36 Aligned_cols=112 Identities=13% Similarity=0.015 Sum_probs=84.0
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
+...+...+.......++.++.+++.||+|||+.+.++.....+..... . +....+...++.|++.+...+...
T Consensus 234 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~--~----~~~~~~~~~~l~g~~~~~~~p~~~ 307 (381)
T PRK03633 234 DASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM--L----SQAAMAPALFILGAAGFTLYPVAM 307 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH--h----hhHHHHHHHHHHHHHHHhHHHHHH
Confidence 3344444555666677888999999999999999988877665522221 1 123445677888888777777777
Q ss_pred hhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 138 AIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
..+.|..|+++++...+.+...+++|..+|+.+...+.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~ 345 (381)
T PRK03633 308 AWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLM 345 (381)
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999988898889988889999999999887663
No 166
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.27 E-value=6.7e-06 Score=82.02 Aligned_cols=112 Identities=13% Similarity=0.024 Sum_probs=88.0
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccC-chhhHHHHHHHHhhhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHH-DQTFAVVAGAVLGIGAGLLWAGQGA 138 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~-~~~~li~~R~i~G~g~g~~~~~~~~ 138 (479)
..+...+....+..++.++.+.+.||+|||+.+..+..+..+....... .+ +.+.+++..++.|++.+...+....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 324 (365)
T TIGR00900 248 HYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGL---TPPNFPLFLVLWFAIGVGYGPINVPQGT 324 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHh---hchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555666777889999999999999988876554442222211 23 4778889999999999998888888
Q ss_pred hhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 139 IMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 139 ~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
++.|..|+++||+..|++.....+|..+|+.+...+
T Consensus 325 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 325 LLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887655
No 167
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.26 E-value=1e-05 Score=85.25 Aligned_cols=118 Identities=14% Similarity=0.092 Sum_probs=90.2
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++...+...........++.++.|.+.||+|||+.+..+.++..+............+.+..+..-++.|+|.|...+..
T Consensus 293 s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~ 372 (495)
T PRK14995 293 SPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLAS 372 (495)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHH
Confidence 34444455555556677888999999999999999888877665533322222223455666778899999999988777
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
...+.+..|++++|...++++...++|..+|..+...+
T Consensus 373 ~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 373 TSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLL 410 (495)
T ss_pred HHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888999999999999999999999999887655
No 168
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.24 E-value=9.9e-06 Score=81.72 Aligned_cols=115 Identities=20% Similarity=0.107 Sum_probs=82.7
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCC
Q 011720 269 MFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSG 348 (479)
Q Consensus 269 ~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (479)
+.+..+.++....+.++..++.++.|++.|| +|||+....+..... +.... ... .
T Consensus 36 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~--~g~r~~~~~~~~~~~-~~~~~----~~~---------------~--- 90 (385)
T TIGR00710 36 STPASIVQMTLTLYLLGFAAGQLLWGPLSDR--YGRRPVLLLGLFIFA-LSSLG----LAL---------------S--- 90 (385)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh--cCChHHHHHHHHHHH-HHHHH----HHH---------------H---
Confidence 3455567888888899999999999999999 689887665543321 11111 100 0
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 349 NDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
+++.......++.|++.+...+....++.+.+ |+++|+++.++......++..++..+..
T Consensus 91 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 150 (385)
T TIGR00710 91 NNIETLLVLRFVQAFGASAGSVISQALVRDIY-PGEELSRIYSILMPVLALAPAVAPLLGG 150 (385)
T ss_pred ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22344555667788888888887888899999 7888999999999988888887766554
No 169
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.23 E-value=3.6e-05 Score=78.64 Aligned_cols=136 Identities=16% Similarity=0.137 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhccchhHHHh-hhhHHHHHHHHHHH-hhh-ccCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 63 NANTALYTTFSVFGILGGGVYNIFGPRVTLA-AGCSTYVLYAGSFL-YYN-HHHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 63 ~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~-ig~~~~~i~~~~~~-~~~-~~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
...+....+..+++++.|.++||+|||+.+. .+.+...+...... ... ..++.+..++..++.|++.+...+. ...
T Consensus 261 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~ 339 (402)
T TIGR00897 261 QIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAV 339 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 3445556677888999999999999988764 23222222111111 111 1245667788899999988875443 455
Q ss_pred hhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccc-hhHHHHHHHHHHHHHHHHhc
Q 011720 140 MTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVND-KTYIAFMCFMSAGAALSLAI 206 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~-~~~~i~~~l~~l~~~l~~~~ 206 (479)
+.|. +|++||+.+|+++....+|..+||.+...+... .++ ..+++..++..++.++..|+
T Consensus 340 ~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~------~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 340 FPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF------FGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cchHHHHHHHHHHHHHHHHHHHHh
Confidence 6676 456899999999999999999999887655321 222 34444455555555554554
No 170
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.21 E-value=5.6e-05 Score=79.63 Aligned_cols=108 Identities=13% Similarity=0.054 Sum_probs=83.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCC
Q 011720 65 NTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYP 144 (479)
Q Consensus 65 ~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~ 144 (479)
.+..-.+..+|+++.+.+.+++++++.+..+.+++.+. .+....+++.+..++.-++.|++.....+...+.+.+..
T Consensus 260 ~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~---~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~ 336 (524)
T PF05977_consen 260 LAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALA---LLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSV 336 (524)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHH---HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33333444445566667778888888888887766552 222234578888888999999999998888888899999
Q ss_pred CccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 145 TATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 145 ~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
|++.|||.++++.+....+..+|.++...+.
T Consensus 337 P~~~~GRv~si~~~~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 337 PDWVRGRVFSIYQMVFFGGMPLGSLLWGFLA 367 (524)
T ss_pred CHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998877664
No 171
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.19 E-value=4.9e-06 Score=70.50 Aligned_cols=103 Identities=19% Similarity=0.111 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHH
Q 011720 281 FYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFS 360 (479)
Q Consensus 281 ~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (479)
.+.++.+++.++.+++.|| +|||+....+..... +.... .. +. .+........++
T Consensus 6 ~~~~~~~~~~~~~g~~~d~--~g~~~~~~~~~~~~~-~~~~~----~~----~~--------------~~~~~~~~~~~~ 60 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDR--FGRKPVLLVGLFIFV-LSTAM----FA----LS--------------SNITVLIIARFL 60 (141)
T ss_pred eehhHHHHHHhhHHHHHhh--cchhHHHHHHHHHHH-HHHHH----HH----Hh--------------ccHHHHHHHHHH
Confidence 4567788899999999999 678886555433221 11111 10 00 123344556677
Q ss_pred HHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 361 YGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
.|+..+...+..+.++.|.. |+++|+++.++.+....++..++..+..
T Consensus 61 ~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 108 (141)
T TIGR00880 61 QGFGAAFALVAGAALIADIY-PPEERGVALGLMSAGIALGPLLGPPLGG 108 (141)
T ss_pred HHHHHHHHHHhHHHHHHHHC-ChhhhhHHHHHHHHhHHHHHHHhHHhHH
Confidence 88888888887888889999 7788999999999999999888877664
No 172
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.18 E-value=6.6e-05 Score=77.52 Aligned_cols=112 Identities=15% Similarity=0.082 Sum_probs=63.6
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHh-hhccCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 61 ANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLY-YNHHHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 61 ~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~-~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
.....++......+++++.|+++||+|||+.+.++.++..+....... .....+....+..-.+.++..+........+
T Consensus 281 ~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (432)
T PRK10406 281 ASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGIL 360 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444545555677788899999999999888776543332211111 1111222222222222333334433445677
Q ss_pred hhcCCCccchHhHHHHHHHHHHh-hhhhhhHHHh
Q 011720 140 MTSYPTATRKGTYISLFWSIFNM-GGVVGGLIPF 172 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~-G~~iG~~i~~ 172 (479)
..|..|++.||..+|+.+..-+. .....+.+..
T Consensus 361 ~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~ 394 (432)
T PRK10406 361 KAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL 394 (432)
T ss_pred HHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH
Confidence 88999999999999998754332 2223555444
No 173
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.17 E-value=7.2e-06 Score=81.39 Aligned_cols=109 Identities=21% Similarity=0.284 Sum_probs=85.1
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
......++......++.++.+.+.||+|+|+.+.+......+...........++....+..-++.|++.+...+....+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 323 (352)
T PF07690_consen 244 QAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSL 323 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334555666666778999999999999888777777666544443332223455677778899999999999999999
Q ss_pred hhcCCCccchHhHHHHHHHHHHhhhhhhh
Q 011720 140 MTSYPTATRKGTYISLFWSIFNMGGVVGG 168 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~G~~iG~ 168 (479)
+.|..|+++||+..|++....++|..+||
T Consensus 324 ~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 324 IQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999886
No 174
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.15 E-value=3.8e-06 Score=84.17 Aligned_cols=110 Identities=13% Similarity=0.079 Sum_probs=80.0
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCC
Q 011720 270 FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGN 349 (479)
Q Consensus 270 f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (479)
.+..+.++......++..++.++.|++.|| +|||+....+.....+.. .+ ..+ . .
T Consensus 27 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~~~~-~~----~~~---------------~---~ 81 (379)
T TIGR00881 27 LSKTDLGLLLSSFSIAYGISKFVMGSVSDR--SNPRVFLPIGLILCAIVN-LF----FGF---------------S---T 81 (379)
T ss_pred CCHhHHHHHHHHHHHHHHhhhhhhhHHHHh--hCCeehhHHHHHHHHHHH-HH----HHH---------------h---h
Confidence 455567788888899999999999999999 789987766654322111 11 100 0 2
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHh
Q 011720 350 DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAW 405 (479)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~ 405 (479)
++....+..++.|++.+...+....++.+.+ ++++|+++.++......+|..++.
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~ 136 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWF-SRSERGTWVSFWNCSHNVGGGLLP 136 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhc-CHhhheeeEeehhccchhHHHHHH
Confidence 2344556667778888877787888899999 778899999998888888887776
No 175
>PRK15075 citrate-proton symporter; Provisional
Probab=98.15 E-value=6.2e-05 Score=77.79 Aligned_cols=110 Identities=15% Similarity=0.055 Sum_probs=70.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHH-HHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcC
Q 011720 65 NTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAG-SFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSY 143 (479)
Q Consensus 65 ~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~-~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~ 143 (479)
......+..++++++|+++||+|||+.+.++.++..+... ........++...+....++.|++.+...+....++.|.
T Consensus 280 ~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~ 359 (434)
T PRK15075 280 TLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEV 359 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 3344455567788999999999999998876544322111 111111123444455556667777777666666788999
Q ss_pred CCccchHhHHHHHHHHH-HhhhhhhhHHHhhh
Q 011720 144 PTATRKGTYISLFWSIF-NMGGVVGGLIPFIM 174 (479)
Q Consensus 144 ~~~~~RG~~~g~~~~~~-~~G~~iG~~i~~~i 174 (479)
.|+++||+.+++.+... .++..++|.+...+
T Consensus 360 ~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 360 MPAEVRTAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred CCCCccchheeHHHHHHHHHHhhhHHHHHHHH
Confidence 99999999999865433 33455677666544
No 176
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.15 E-value=1.7e-05 Score=79.39 Aligned_cols=91 Identities=13% Similarity=0.096 Sum_probs=71.5
Q ss_pred HHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhh-cc-------CchhhHHHHHHHHhhhhhhhhhhhhhhhhc
Q 011720 71 TFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYN-HH-------HDQTFAVVAGAVLGIGAGLLWAGQGAIMTS 142 (479)
Q Consensus 71 ~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~-~~-------~~~~~li~~R~i~G~g~g~~~~~~~~~i~e 142 (479)
...++.++++++.||+|||+.+.++.++..+......... .. ++.+.++...++.|++.+..++...+++.|
T Consensus 257 ~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 336 (356)
T TIGR00901 257 GAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSK 336 (356)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3457789999999999999998888876655333222211 11 245678888999999999999999999999
Q ss_pred CCCccchHhHHHHHHHHHH
Q 011720 143 YPTATRKGTYISLFWSIFN 161 (479)
Q Consensus 143 ~~~~~~RG~~~g~~~~~~~ 161 (479)
.+|+++||+.+|++++..+
T Consensus 337 ~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 337 LSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hcCCCccHHHHHHHHHHHh
Confidence 9999999999999887654
No 177
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.14 E-value=4.3e-05 Score=79.42 Aligned_cols=138 Identities=12% Similarity=-0.069 Sum_probs=75.5
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhcc--chhHHH-hhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIF--GPRVTL-AAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~--Grk~~l-~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
..+....+......++.+++|+++||+ |||+.. ++...+..+....+.. ...++.+..++.-++.|.+........
T Consensus 290 ~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~ 368 (452)
T PRK11273 290 KSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWL-NPAGNPTVDMACMIVIGFLIYGPVMLI 368 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHH-hcccChHHHHHHHHHHHHHHHhHHHHH
Confidence 333344444455566789999999999 555432 2222222221111111 112344444555555555433222233
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhh-hhhHHHhhhhhccCCcccccc-hhHHHHHHHHHHHHHHHH
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGV-VGGLIPFIMNYHRTDAESVND-KTYIAFMCFMSAGAALSL 204 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~-iG~~i~~~i~~~~~~~~~~~~-~~~~i~~~l~~l~~~l~~ 204 (479)
..+..|..|+++||+.+|+.....++|.. +|+.+...+..+ .+| ..|.+..++.+++++...
T Consensus 369 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~------~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 369 GLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF------FGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH------hcchHHHHHHHHHHHHHHHHHH
Confidence 45567999999999999999888777754 477766555322 223 234444444555544443
No 178
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.12 E-value=3.6e-05 Score=79.63 Aligned_cols=116 Identities=16% Similarity=0.043 Sum_probs=75.0
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCC
Q 011720 269 MFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSG 348 (479)
Q Consensus 269 ~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (479)
+.+..+.++....+.++..++.++.|++.|| +|||+....+.....+.. .. ... . + . ..
T Consensus 57 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr--~g~~~~~~~~~~~~~~~~-~~----~~~-~--~--------~-~~-- 115 (438)
T TIGR00712 57 GFSKGELGFALSAISIAYGFSKFIMGSVSDR--SNPRVFLPAGLILSAAVM-LL----MGF-V--P--------W-AT-- 115 (438)
T ss_pred CCCHhHhHHHHHHHHHHHHHhhhccchhhhc--cCCceehHHHHHHHHHHH-HH----Hhc-c--c--------c-cc--
Confidence 4556667888888899999999999999999 678886655543321111 11 100 0 0 0 01
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhh
Q 011720 349 NDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQ 406 (479)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~ 406 (479)
.++.......++.|+..+...+.....+.+.+ |+++|+++.++++...+++..+...
T Consensus 116 ~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~g~~~~~~ 172 (438)
T TIGR00712 116 SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWW-SQSERGTIVSIWNCAHNIGGGIPPL 172 (438)
T ss_pred chHHHHHHHHHHHHHHhhcchHHHHHHHHHhc-CcccchhHHHHHHHHHHhHhHHHHH
Confidence 22333344445566666655555666778888 7888999999998888877766543
No 179
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.12 E-value=3.1e-05 Score=79.87 Aligned_cols=112 Identities=17% Similarity=0.166 Sum_probs=89.2
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhh
Q 011720 62 NNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMT 141 (479)
Q Consensus 62 ~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~ 141 (479)
+....+......++.++.++++||+|+|+++..+.+++.+........ ..+|.+.+++.-++.|++.+..++...++++
T Consensus 263 ~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~a 341 (428)
T PF13347_consen 263 SIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFL-GPGSPWLVLILFILAGIGYGAFFVIPWAMLA 341 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHH-HhhhHHHHHHHHHHhHhhhcccccccccccc
Confidence 333445566667778899999999999999999999887744443332 1258899999999999999999999999999
Q ss_pred cCCC-------ccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 142 SYPT-------ATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 142 e~~~-------~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
|+.+ +++.|...|.+.....+|..+++.+...+
T Consensus 342 d~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 342 DVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred cchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 9886 34468899999999999998888876654
No 180
>PRK10054 putative transporter; Provisional
Probab=98.10 E-value=5.6e-05 Score=77.14 Aligned_cols=97 Identities=16% Similarity=0.191 Sum_probs=75.1
Q ss_pred hhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHH
Q 011720 76 GILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISL 155 (479)
Q Consensus 76 ~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~ 155 (479)
.++.+.+.||.+||+.+.++..+..+........ .++.+.+++..++.|+|.+...+....++.+..|++.||+..+.
T Consensus 261 ~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~ 338 (395)
T PRK10054 261 QYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS--GNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSA 338 (395)
T ss_pred hhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHc--chHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhH
Confidence 4677889999999999988877665533222211 24567778889999999998888888899999999999999987
Q ss_pred HHHHHHhhhhhhhHHHhhhh
Q 011720 156 FWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 156 ~~~~~~~G~~iG~~i~~~i~ 175 (479)
.. ...+|..+|+.+...+.
T Consensus 339 ~~-~~~~G~~~Gp~~~G~l~ 357 (395)
T PRK10054 339 QS-LGWLGAAINPLVSGVIL 357 (395)
T ss_pred HH-HHHHHHHHHHHHHHHHH
Confidence 65 45578889998877664
No 181
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.10 E-value=1.9e-05 Score=79.62 Aligned_cols=113 Identities=17% Similarity=0.102 Sum_probs=80.5
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCC
Q 011720 270 FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGN 349 (479)
Q Consensus 270 f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (479)
.+..+.++....+.++..++.++.|++.|| +|||+....+.....+. .... .. . +
T Consensus 23 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~--~g~~~~~~~~~~~~~i~-~~~~----~~---------------~---~ 77 (377)
T PRK11102 23 VSAGSVQMTLSAYILGFAIGQLFYGPMADS--FGRKPVILGGTLVFALA-AVAC----AL---------------A---Q 77 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhchHHhh--cCChHHHHHHHHHHHHH-HHHH----HH---------------H---c
Confidence 455566777778889999999999999999 67888766654432211 1111 00 0 1
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 350 DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
++....+..++.|++.+...+....++.+.+ ++++|+++.++......+|..++..+.
T Consensus 78 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~ 135 (377)
T PRK11102 78 TIDQLIYMRFLHGLAAAAASVVINALMRDMF-PKEEFSRMMSFVTLVMTIAPLLAPIIG 135 (377)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2334556667788888888787788899998 788899999999888888887776654
No 182
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.08 E-value=8.6e-05 Score=75.74 Aligned_cols=99 Identities=20% Similarity=0.325 Sum_probs=78.1
Q ss_pred hhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhH----HHHHHHHhhhhhhhhhhhhhhhhcCCCccchH
Q 011720 75 FGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFA----VVAGAVLGIGAGLLWAGQGAIMTSYPTATRKG 150 (479)
Q Consensus 75 g~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~l----i~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG 150 (479)
.-++.+.+..|+|.|+.+.++.+.+++=-..+.. .+++.+.. +.+-.++|+..+..+.+...|+.+.+|++.|+
T Consensus 259 ~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~--~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~a 336 (400)
T PF03825_consen 259 FFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAY--FSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRA 336 (400)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH--hcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchH
Confidence 3367899999999999999999987763222222 12344443 34456799999999999999999999999999
Q ss_pred hHHHHHHHH-HHhhhhhhhHHHhhhh
Q 011720 151 TYISLFWSI-FNMGGVVGGLIPFIMN 175 (479)
Q Consensus 151 ~~~g~~~~~-~~~G~~iG~~i~~~i~ 175 (479)
++-+++... ..+|..+|+.++..+.
T Consensus 337 t~Q~l~~~~~~Glg~~iG~~igG~l~ 362 (400)
T PF03825_consen 337 TAQGLYSALSFGLGGAIGSLIGGWLY 362 (400)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999875 5789999999888764
No 183
>PRK09848 glucuronide transporter; Provisional
Probab=98.06 E-value=0.00013 Score=75.76 Aligned_cols=103 Identities=22% Similarity=0.169 Sum_probs=79.3
Q ss_pred HHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCcc---
Q 011720 71 TFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTAT--- 147 (479)
Q Consensus 71 ~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~--- 147 (479)
...++.++.+.+.||+|+|+.+.+|.++..+........ ...+.+.+++.-++.|+|.+...+...+..+|..|++
T Consensus 276 ~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~ 354 (448)
T PRK09848 276 GTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV-SVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYL 354 (448)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 345567889999999999999999987766532222221 1235677778889999999998888888888887654
Q ss_pred ----chHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 148 ----RKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 148 ----~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
++|...|++.....+|..+|+.+...+
T Consensus 355 ~g~r~~G~~~~~~~~~~klg~aig~~i~g~~ 385 (448)
T PRK09848 355 TGVRIEGLTYSLFSFTRKCGQAIGGSIPAFI 385 (448)
T ss_pred hCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 459999999999999999998876644
No 184
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.05 E-value=0.00019 Score=73.38 Aligned_cols=108 Identities=13% Similarity=0.005 Sum_probs=77.7
Q ss_pred HHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhh--hccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcC
Q 011720 66 TALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYY--NHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSY 143 (479)
Q Consensus 66 ~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~--~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~ 143 (479)
.....+..++.++.+.+.||+|||+.+.++.+...+........ ...++.+.++++-++.|+|.+...+....... .
T Consensus 258 ~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~-~ 336 (406)
T PRK15402 258 VPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTL-F 336 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHh-h
Confidence 34445566788999999999999999988877554422222111 01234566788899999999987655544443 3
Q ss_pred CCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 144 PTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 144 ~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
.++++||+..+.+.....+|..+|+.+...+
T Consensus 337 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l 367 (406)
T PRK15402 337 SSDVSKGTVSAAMGMLSMLIFTVGIELSKHA 367 (406)
T ss_pred hccccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4568999999999999999999998877654
No 185
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.04 E-value=8.1e-05 Score=76.78 Aligned_cols=140 Identities=11% Similarity=-0.011 Sum_probs=82.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHh----hhccCchhh---HHHHHHHHhhhhhhh-hhhh
Q 011720 65 NTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLY----YNHHHDQTF---AVVAGAVLGIGAGLL-WAGQ 136 (479)
Q Consensus 65 ~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~----~~~~~~~~~---li~~R~i~G~g~g~~-~~~~ 136 (479)
+...-....+..++++.+.||+|||+.++++..+..+....+.. .+..+ .|. .+++-++-.++.+.- -+..
T Consensus 311 n~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~-~~~~y~~i~~~~~~~~~f~~G~gpi~ 389 (485)
T KOG0569|consen 311 NLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFG-SWLSYLCIAAIFLFIISFAIGPGPIP 389 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhhcCCCchh
Confidence 33333444566788999999999999999997765443222211 11111 121 234444433333332 2344
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccchhHHHHHHHHHHHHHHHHhccCCcc
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDKTYIAFMCFMSAGAALSLAILPPSR 211 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~ 211 (479)
.-+.+|+.|++.|..+.++-....-+...+=+..-..+.. .++-..++.|.+.+++..+...+.+||.|
T Consensus 390 ~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~------~~g~~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 390 WFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQN------VIGPYVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcchhhHHHHHHHHHHHHHHHHhCcccC
Confidence 5577899999999999998776665554433332222221 13334567777777776666667778765
No 186
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.04 E-value=0.00011 Score=74.79 Aligned_cols=111 Identities=11% Similarity=-0.053 Sum_probs=82.1
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhh
Q 011720 62 NNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMT 141 (479)
Q Consensus 62 ~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~ 141 (479)
+...++......++.++.+++.||+|||+.+.++.+++.+..... . .++|.+.+++.++++|++.+........+..
T Consensus 257 g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~--~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 333 (396)
T TIGR00882 257 GYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGS--S-FATTALEVVILKMLHAFEVPFLLVGCFKYIT 333 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH--H-hcCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555566677889999999999999999888766632221 1 3567888899999999998876655556777
Q ss_pred cCCCccchHhHHHH-HHHHHHhhhhhhhHHHhhhh
Q 011720 142 SYPTATRKGTYISL-FWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 142 e~~~~~~RG~~~g~-~~~~~~~G~~iG~~i~~~i~ 175 (479)
+..+++.|+...+. ++....+|..+|+.+...+.
T Consensus 334 ~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~ 368 (396)
T TIGR00882 334 SQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMY 368 (396)
T ss_pred HhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHH
Confidence 77777777776665 66788999999988877663
No 187
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.04 E-value=8.6e-06 Score=85.89 Aligned_cols=115 Identities=10% Similarity=-0.062 Sum_probs=81.5
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchh
Q 011720 274 TRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAG 353 (479)
Q Consensus 274 ~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (479)
..++......++.+++.++.|++.|| +|||+....+.....+.. .+. .. . .+. . .. .++..
T Consensus 57 ~~~~~~~~~~ig~~ig~~~~g~l~d~--~Grr~~~~~~~~~~~v~~-~~~----~~-~--~~~------~-~~--~~~~~ 117 (502)
T TIGR00887 57 VSAAVNGSASIGTLAGQLFFGWLADK--LGRKRVYGMELIIMIIAT-VAS----GL-S--PGS------S-PK--SVMAT 117 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHH-HHH----HH-c--cCc------c-cc--hHHHH
Confidence 45677788899999999999999999 789997766544332111 111 11 0 100 0 00 12344
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 354 PFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
..+.-++.|++.+...+....++.|.+ |+++|+++.++......+|.+++..+.
T Consensus 118 ~~~~r~l~G~~~g~~~~~~~~~~~e~~-p~~~Rg~~~~~~~~~~~~g~~~g~~~~ 171 (502)
T TIGR00887 118 LCFWRFWLGVGIGGDYPLSAIITSEFA-TKKWRGAMMAAVFAMQGFGILAGAIVA 171 (502)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556667788888888888889999999 899999999999999988887776554
No 188
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.03 E-value=4.9e-05 Score=77.23 Aligned_cols=113 Identities=8% Similarity=0.058 Sum_probs=77.7
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCC
Q 011720 270 FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGN 349 (479)
Q Consensus 270 f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (479)
.+..+.++....+.++..++.++.|++.|| +|||+....+..... +.... ... . +
T Consensus 35 ~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr--~g~r~~l~~~~~~~~-i~~~~----~~~----------------~--~ 89 (392)
T PRK10473 35 ASEAQLHIAFSVYLAGMAAAMLFAGKIADR--SGRKPVAIPGAALFI-IASLL----CSL----------------A--E 89 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHhHHHHH--hCChHHHHHHHHHHH-HHHHH----HHH----------------h--C
Confidence 344456677777888999999999999999 689887666543321 11111 100 0 1
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 350 DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
+.....+..++.|+..+...+..+.++.+.+ |+++|+++.++.+...+++..++..+.
T Consensus 90 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~i~~~~~~~i~ 147 (392)
T PRK10473 90 TSSLFLAGRFLQGIGAGCCYVVAFAILRDTL-DDRRRAKVLSLLNGITCIIPVLAPVLG 147 (392)
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233445556778887777777888899999 789999999999888877776665544
No 189
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.00 E-value=3.8e-05 Score=76.51 Aligned_cols=105 Identities=12% Similarity=0.189 Sum_probs=85.5
Q ss_pred HHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccc
Q 011720 69 YTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATR 148 (479)
Q Consensus 69 ~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~ 148 (479)
...-.+|+++.|.+.||+|.|+++.++.+++.+ .+.... ......-+.+...+.|+..|..++..-.|.++..|+++
T Consensus 298 ~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~--~~~~~~-~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k 374 (438)
T COG2270 298 SVVAALGAIIAGFLDERFGSKPVLMIGLVILSI--AALYLI-FLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK 374 (438)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeehHHHHHHHH--HHHHHH-HccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc
Confidence 344567899999999999999999999988776 222221 12334456777888999999999999999999999999
Q ss_pred hHhHHHHHHHHHHhhhhhhhHHHhhhhh
Q 011720 149 KGTYISLFWSIFNMGGVVGGLIPFIMNY 176 (479)
Q Consensus 149 RG~~~g~~~~~~~~G~~iG~~i~~~i~~ 176 (479)
-|+.+|+|...-..++.+||+.-..+..
T Consensus 375 ~~~fFglyaltgra~S~~gp~lv~v~t~ 402 (438)
T COG2270 375 EGRFFGLYALTGRAASFLGPFLVAVITQ 402 (438)
T ss_pred ccceeehhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999987665543
No 190
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.98 E-value=0.00029 Score=72.15 Aligned_cols=147 Identities=19% Similarity=0.139 Sum_probs=99.5
Q ss_pred cccchhHHHHHHHHHHhhhhhhhhhh------hcCCCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhh
Q 011720 22 RYNSPLVQVSLIGLVCFCCPGMFNAL------SGMGGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAG 95 (479)
Q Consensus 22 ~~~~~~~~~~~~~~~~f~~~~~~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig 95 (479)
+.+|++....+..++.++.....++. ..++. ++......+........++.++.+++.+|+|+|+.+.++
T Consensus 233 ~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~----~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~ 308 (467)
T COG2211 233 FKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGD----PELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIG 308 (467)
T ss_pred HccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCC----hHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHH
Confidence 46677776666555554443222221 12221 122222333333343444578899999999999999999
Q ss_pred hHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCC-------ccchHhHHHHHHHHHHhhhhhhh
Q 011720 96 CSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPT-------ATRKGTYISLFWSIFNMGGVVGG 168 (479)
Q Consensus 96 ~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~-------~~~RG~~~g~~~~~~~~G~~iG~ 168 (479)
.+++++.....+.. ..++.+++++..++.++|.+..++...+.++|..+ .+.-|...+.+..+.-+|..+|.
T Consensus 309 ~~~~~i~~~~~~f~-~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~ 387 (467)
T COG2211 309 LLLLAVGYLLLYFT-PAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAG 387 (467)
T ss_pred HHHHHHHHHHHHhh-cCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHH
Confidence 99888855555443 25678999999999999999998888888888765 44457778888888888888887
Q ss_pred HHHhh
Q 011720 169 LIPFI 173 (479)
Q Consensus 169 ~i~~~ 173 (479)
.+...
T Consensus 388 ~~~g~ 392 (467)
T COG2211 388 FIPGW 392 (467)
T ss_pred HHHHH
Confidence 65543
No 191
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.98 E-value=0.00011 Score=75.00 Aligned_cols=96 Identities=15% Similarity=0.030 Sum_probs=71.4
Q ss_pred hhhhhh-hccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHH
Q 011720 78 LGGGVY-NIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLF 156 (479)
Q Consensus 78 ~~g~l~-d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~ 156 (479)
..+... ||++.|+.+..+.++..+... ... .+++.+.+++..++.|+|.+...+...+++.|..|+++||+.+|++
T Consensus 262 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~--~l~-~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~ 338 (400)
T PRK11646 262 PIARWSEKRFRLEHRLMAGLLIMSLSMF--PIG-MVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFS 338 (400)
T ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHH--HHH-HhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHH
Confidence 334444 556666666666665544221 221 2456777777888899999888788888999999999999999999
Q ss_pred HHHHHhhhhhhhHHHhhhhh
Q 011720 157 WSIFNMGGVVGGLIPFIMNY 176 (479)
Q Consensus 157 ~~~~~~G~~iG~~i~~~i~~ 176 (479)
.....+|..+|+.+...+..
T Consensus 339 ~~~~~~g~~ig~~l~G~l~~ 358 (400)
T PRK11646 339 RLGLALGGAIGYIGGGWLFD 358 (400)
T ss_pred HHHHHHHHHhcccchHHHHH
Confidence 99999999999998876643
No 192
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.95 E-value=9e-05 Score=86.10 Aligned_cols=112 Identities=13% Similarity=0.031 Sum_probs=87.5
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
..+...+....+..++.++++.+.||+++|+.+.++.++..+....+. ...+.+.+++.-++.|++.+...+...++
T Consensus 270 ~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 346 (1146)
T PRK08633 270 QVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLP---TAPSLASVLVLFFLFGFSAGLFIVPLNAL 346 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHH---HhhhHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 334445555566677889999999999999988888776655222222 23467788888999999999988888889
Q ss_pred hhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 140 MTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 140 i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
+.+..|++.||+.+|+..+...+|..+++.++..+
T Consensus 347 ~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 347 IQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLF 381 (1146)
T ss_pred HhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988887776544
No 193
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.93 E-value=7.1e-05 Score=74.98 Aligned_cols=114 Identities=15% Similarity=0.065 Sum_probs=78.4
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCC
Q 011720 269 MFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSG 348 (479)
Q Consensus 269 ~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (479)
+.+..+.++....+.++..++.++.|++.|| +|||+..+.+.....+.. .. ..+ .
T Consensus 33 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr--~g~r~~~~~~~~~~~i~~-~~----~~~----------------~-- 87 (366)
T TIGR00886 33 GLSTAQLGNLVAVPVLAGAVLRIILGFLVDK--FGPRYTTTLSLLLLAIPC-LW----AGL----------------A-- 87 (366)
T ss_pred CCCHHHhhHhhHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHHHH-HH----HHH----------------H--
Confidence 3455567788888899999999999999999 789987766654432111 11 100 0
Q ss_pred C-CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 349 N-DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 349 ~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
+ ++....+..++.|+..+.+.+ ...++++.+ ++++|+++.+++....++|..++..+.+
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 147 (366)
T TIGR00886 88 VQSYSVLLLLRLFIGIAGGSFAS-CMPWISFFF-PKKIQGTALGLAAGWGNMGGGVAQFVMP 147 (366)
T ss_pred hhhHHHHHHHHHHHHHhchhhHh-HHHHHHHhc-CHhhhhHHHHHHHHHhHHHHHHHHHHHH
Confidence 1 334445556667777655543 566788888 7889999999998888888887766654
No 194
>PRK09669 putative symporter YagG; Provisional
Probab=97.93 E-value=0.00017 Score=74.75 Aligned_cols=104 Identities=10% Similarity=0.062 Sum_probs=77.2
Q ss_pred HHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCC----
Q 011720 70 TTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPT---- 145 (479)
Q Consensus 70 ~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~---- 145 (479)
....++.+++++++||+|+|+.+.++.++..+........ ..++.+.+++..++.|++.+...+...+.++|..|
T Consensus 275 i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~ 353 (444)
T PRK09669 275 IAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFI-PPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEK 353 (444)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 3344566889999999999999998877655422222221 13567778888999999999998888889988875
Q ss_pred ---ccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 146 ---ATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 146 ---~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
++..|...+.+.....+|..+|+.+...+
T Consensus 354 ~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 354 RSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred hcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23346678888888899999988877654
No 195
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.92 E-value=0.00013 Score=76.53 Aligned_cols=146 Identities=15% Similarity=0.019 Sum_probs=79.6
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHH----HhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVT----LAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLW 133 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~----l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~ 133 (479)
+...+...++...+..++.+++|+++||+|||+. ..+..+...+.....+.....++.+..++.-++.|++.+...
T Consensus 287 ~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 366 (476)
T PLN00028 287 LETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAAC 366 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhh
Confidence 4444555666677778899999999999997621 111111111111111111123445555555566666655544
Q ss_pred hhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcc
Q 011720 134 AGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSR 211 (479)
Q Consensus 134 ~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~ 211 (479)
.....++.+. .+++||...|+......+|+.+++++.. .. ...+|. .+.+..++.+++.++.++.+.|.+
T Consensus 367 ~~~~~~~~~~-~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~------~~~~y~~~f~~~~~~~~i~~~~~~~~~~~~~ 437 (476)
T PLN00028 367 GATFGIVPFV-SRRSLGVISGLTGAGGNVGAVLTQLLFF-TG------SSYSTETGISLMGVMIIACTLPVAFIHFPQW 437 (476)
T ss_pred hhhcccCccc-ChhhchhhhhhhhccccHHHHHHHHHHH-hc------CCccHhhHHHHHHHHHHHHHHHHHheeccch
Confidence 4444555565 4578999999986666666666665421 10 112232 344445555666555556554443
No 196
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.90 E-value=0.00032 Score=70.37 Aligned_cols=114 Identities=18% Similarity=0.129 Sum_probs=78.1
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
.+..+..+-++=.+..+|++++|.+.|| +.|+++........+-...+.. ..++.+..++.-++.|++.+.....-.
T Consensus 246 ~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~--~~~~~~~~~~~~~~wg~a~~~~~~~~~ 322 (394)
T COG2814 246 VSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTF--TGASPALALALLFLWGFAFSPALQGLQ 322 (394)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHH--hcchHHHHHHHHHHHHHHhhhhhhHHH
Confidence 3344444434444557788999999999 8888888886655542222222 245566667777777777666433333
Q ss_pred hhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 138 AIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 138 ~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
.-+++ ..|+.++...+++...+|+|..+|.+++..+.
T Consensus 323 ~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~ 359 (394)
T COG2814 323 TRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVL 359 (394)
T ss_pred HHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344 33789999999999999999999999988664
No 197
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.89 E-value=0.00021 Score=74.24 Aligned_cols=158 Identities=15% Similarity=0.094 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHhhhhhhccc---cccc-cccccchhhhHHHHHHHHHHHHHHHHhhhhccc--cccCccceeeehhhhhH
Q 011720 243 KMLLLFPAAWASNFFYSYQF---NNVN-GLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDF--SFQSLRTRGLVGIGIVA 316 (479)
Q Consensus 243 r~ll~~~~~~~~~~~~s~~~---~~~~-~~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr--~~~gRr~~~~~g~~~~~ 316 (479)
|++.+....+..|+.++.+. +.+. ..+.+....++......+..++..++.|.++|| .|+|||+..+.+.....
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~ 84 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALV 84 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHH
Confidence 44444444444454333221 1222 123455566777778888999999999999996 24799998776422221
Q ss_pred HHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCch--hHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhh--hHHHHH
Q 011720 317 LFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFA--GPFVLYFSYGLLDAMFQSMVYWVIGALADDSETL--SRYTGF 392 (479)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r--~~~~~~ 392 (479)
.+.+.+. .+....... -.+..+ ..+ .... .....+.+..+.....++...++++++. |+++| ..+.+.
T Consensus 85 ~~~l~ll----~~~~~~~~~-~~~~~~-~~~-~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~-p~~~~~~~~a~~~ 156 (477)
T TIGR01301 85 AFAVILI----GFAADIGHL-FGDNLD-KKT-KPRAIIVFVVGFWILDVANNMLQGPCRAFLADLT-GGDARRTRIANAY 156 (477)
T ss_pred HHHHHHH----HhCchhhhh-cccccc-ccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-CchhHHHHHHHHH
Confidence 1221111 110100000 000000 000 1111 1111222233344445555667889998 44433 578898
Q ss_pred HHHHHHHHHHHHhhhc
Q 011720 393 YKGVQSAGAAVAWQVD 408 (479)
Q Consensus 393 ~~~~~~~g~~i~~~~~ 408 (479)
.+...++|+.+++.+.
T Consensus 157 ~~~~~~lG~ilg~~~g 172 (477)
T TIGR01301 157 FSFFMAIGNVLGYAAG 172 (477)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888999999988755
No 198
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.88 E-value=0.00013 Score=74.20 Aligned_cols=113 Identities=14% Similarity=-0.034 Sum_probs=73.0
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCC
Q 011720 269 MFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSG 348 (479)
Q Consensus 269 ~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (479)
+.+..+.++....+.++..++.++.|++.|| +|||+....+.....+.. .. ... .
T Consensus 39 ~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr--~grr~~~~~~~~~~~~~~-~~----~~~----------------~-- 93 (394)
T PRK11652 39 NVREGAVQAVMAAYLLTYGLSQLFYGPLSDR--VGRRPVILVGMSIFILGT-LV----ALF----------------A-- 93 (394)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh--cCChHHHHHHHHHHHHHH-HH----HHH----------------H--
Confidence 3455567777778899999999999999999 789887665543321111 11 000 0
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhh
Q 011720 349 NDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQV 407 (479)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~ 407 (479)
+++....+..++.|++.+...+....++.+.+ +.++++++.+..+....++..++..+
T Consensus 94 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~i 151 (394)
T PRK11652 94 HSLTVLIAASAIQGLGTGVGGVMARTLPRDLY-EGTQLRHANSLLNMGILVSPLLAPLI 151 (394)
T ss_pred ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22334455566777777666666666777877 56778888877766666655555443
No 199
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.87 E-value=5.3e-05 Score=73.96 Aligned_cols=94 Identities=12% Similarity=0.096 Sum_probs=74.3
Q ss_pred HhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCch--hhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHh
Q 011720 74 VFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQ--TFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGT 151 (479)
Q Consensus 74 ig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~--~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~ 151 (479)
-|.++.+.+.||+|||++|....+++.++....... ...|. ..+..+|++.-.+. .+...|.-|..|.+.|+.
T Consensus 396 PGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c-~~rn~~tvllf~arafisg~f----qvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 396 PGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTC-KTRNAYTVLLFTARAFISGAF----QVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred CchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHh-cCcchhHHHHHHHHHHHhchh----eEEEEecCcccchhhhhc
Confidence 356899999999999999999999998876554432 23343 34567787754333 456678889999999999
Q ss_pred HHHHHHHHHHhhhhhhhHHHh
Q 011720 152 YISLFWSIFNMGGVVGGLIPF 172 (479)
Q Consensus 152 ~~g~~~~~~~~G~~iG~~i~~ 172 (479)
..|.-..+..+|.++.|.|+.
T Consensus 471 gvGtcSsmaRIggI~~p~iA~ 491 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIAM 491 (528)
T ss_pred chhhhhhHHhhhhhhhhHHHH
Confidence 999999999999999999983
No 200
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.86 E-value=0.00019 Score=74.90 Aligned_cols=119 Identities=14% Similarity=0.083 Sum_probs=89.1
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHH-hh---h---ccCchhhHHHHHHHHhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFL-YY---N---HHHDQTFAVVAGAVLGIGAG 130 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~-~~---~---~~~~~~~li~~R~i~G~g~g 130 (479)
+...+...+..-.+..++..+.+.+.+|++.|+.+.++.+++.+...... .. + ..++.+..+..-++.+++.+
T Consensus 287 ~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g 366 (468)
T TIGR00788 287 PSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQ 366 (468)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHH
Confidence 44444444444455566777888888999999999999988776221111 00 0 01334466778899999999
Q ss_pred hhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhh
Q 011720 131 LLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNY 176 (479)
Q Consensus 131 ~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~ 176 (479)
+.+.....++++.+|++++|...+++.+..++|..+|+.++..+..
T Consensus 367 ~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~ 412 (468)
T TIGR00788 367 LKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLME 412 (468)
T ss_pred HHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988889999999999999999999999999999999988776653
No 201
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.86 E-value=0.00051 Score=69.78 Aligned_cols=105 Identities=13% Similarity=0.011 Sum_probs=72.0
Q ss_pred HHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHh-hh--ccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCc-
Q 011720 71 TFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLY-YN--HHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTA- 146 (479)
Q Consensus 71 ~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~-~~--~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~- 146 (479)
...++.+++|++.||+|+|+.+.++.++..+....... .. ...+...++..-.+.+++.|...++......+..++
T Consensus 256 ~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 335 (390)
T TIGR02718 256 TVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDG 335 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 34556789999999999999998876654221111111 11 012334445555666677777666666666666655
Q ss_pred cchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 147 TRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 147 ~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
+++|+.++++++..++|..+|+.++..+.
T Consensus 336 ~~~g~~~~~~~~~~~lg~~~g~~~~G~l~ 364 (390)
T TIGR02718 336 DQAGTDVTAVQSTRDLGELIASSIAGYLT 364 (390)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999987663
No 202
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.85 E-value=0.028 Score=56.85 Aligned_cols=131 Identities=10% Similarity=0.014 Sum_probs=91.5
Q ss_pred HHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhH
Q 011720 73 SVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTY 152 (479)
Q Consensus 73 aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~ 152 (479)
-..-++...+.|.+|.|++++++++..++--..++. .++...+-+.-++-|++.+.. ++-.+|+-...|+++=-|.
T Consensus 55 l~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~---~~sv~~mq~~q~~yg~~~a~e-vay~sYiys~v~~~~yq~v 130 (412)
T PF01770_consen 55 LAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLF---GTSVLAMQLMQFFYGLATAAE-VAYYSYIYSVVDKEHYQKV 130 (412)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH---HCcHHHHHHHHHHHHHHHHHH-HHHHHHheeecCHHHHHHH
Confidence 334567888999999999999999987663333333 478999999999999988875 3555666666788888889
Q ss_pred HHHHHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCcc
Q 011720 153 ISLFWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPSR 211 (479)
Q Consensus 153 ~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~~ 211 (479)
.+.--+...+|-.+|++++-.+... +..+.. +..+....+.++.++.++++++++
T Consensus 131 ts~~raa~l~g~~~s~~lgQllvs~----~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 131 TSYTRAATLVGRFISSLLGQLLVSF----GGVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 9988888888888888887755321 122222 223334445666666677655543
No 203
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.82 E-value=0.00034 Score=71.45 Aligned_cols=101 Identities=15% Similarity=0.017 Sum_probs=61.2
Q ss_pred HHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhc-cCchhhHHHHH----HHHhhhhhhhhhhhhhhhhcCC
Q 011720 70 TTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNH-HHDQTFAVVAG----AVLGIGAGLLWAGQGAIMTSYP 144 (479)
Q Consensus 70 ~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~-~~~~~~li~~R----~i~G~g~g~~~~~~~~~i~e~~ 144 (479)
....++.++++.+.||+|||+.+.++.++..+....+..... .++.+.+++.- +..|++.+...+....++.+..
T Consensus 257 ~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 336 (402)
T PRK11902 257 AATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSF 336 (402)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 345678899999999999999888777655443222222111 23455554444 4566666666666777777776
Q ss_pred CccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 145 TATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 145 ~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
|.++++. +.....+|..+++.++..+
T Consensus 337 ~~~~~~~----~~~~~~l~~~~~~~~~G~l 362 (402)
T PRK11902 337 SATQYAL----LSALASVGRVYVGPTSGYL 362 (402)
T ss_pred cHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 7665544 4444456665555554444
No 204
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.81 E-value=0.00014 Score=74.68 Aligned_cols=113 Identities=10% Similarity=0.030 Sum_probs=74.2
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCC
Q 011720 271 NLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGND 350 (479)
Q Consensus 271 ~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (479)
+....+.....+.++..++.++.|.++|| +|||+....+..... +..... .. . .+
T Consensus 49 ~~~~~~~~~s~~~~~~~~~~~~~G~l~dr--~Grr~~l~~~~~~~~-~~~~~~----~~---------------a---~~ 103 (413)
T PRK15403 49 DVSLAPASVSLYLAGGMALQWLLGPLSDR--IGRRPVLITGALIFT-LACAAT----LF---------------T---TS 103 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhHHHHH--cCchHHHHHHHHHHH-HHHHHH----HH---------------c---CC
Confidence 33444555566778888999999999999 789987666543321 111110 00 1 22
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 351 FAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 351 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
+....+.-++.|+..+...+..+.++.+.+ +.++++++.++......++..++..+..
T Consensus 104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~lg~ 161 (413)
T PRK15403 104 MTQFLIARFIQGTSICFIATVGYVTVQEAF-GQTKGIKLMAIITSIVLVAPIIGPLSGA 161 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556677776655565667788888 6778899999988888888888766654
No 205
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.81 E-value=4e-05 Score=76.32 Aligned_cols=146 Identities=13% Similarity=0.169 Sum_probs=95.2
Q ss_pred HHhhchHHHHHHHHHH-Hhhhh-----hhcccccccccc-ccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceee
Q 011720 237 KLFRNWKMLLLFPAAW-ASNFF-----YSYQFNNVNGLM-FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGL 309 (479)
Q Consensus 237 ~~~~~~r~ll~~~~~~-~~~~~-----~s~~~~~~~~~~-f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~ 309 (479)
+..+++|+.+...+++ +..++ ++...+.+...+ ++..+.++....+.+..-++-.+.|.++|| .+.|...-
T Consensus 21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr--~npr~fm~ 98 (448)
T COG2271 21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDR--SNPRYFMA 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc--CCCceeeh
Confidence 4455566655544433 33331 122223443333 677777777666777777777888999999 44555444
Q ss_pred ehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHH
Q 011720 310 VGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRY 389 (479)
Q Consensus 310 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~ 389 (479)
.|+....++ .+++ +. . ++.....++.++.|.+++.--|.+.-.+..-+ +.++|++.
T Consensus 99 ~gLilsai~-nil~-------------------Gf-s--~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wf-sr~eRG~~ 154 (448)
T COG2271 99 FGLILSAIV-NILF-------------------GF-S--PSLFLFAVLWVLNGWFQGMGWPPCARTITHWF-SRKERGTW 154 (448)
T ss_pred HHHHHHHHH-HHHH-------------------hh-h--hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHc-CccccCce
Confidence 443322111 1111 11 1 34566777888899998888888888899999 78899999
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 011720 390 TGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 390 ~~~~~~~~~~g~~i~~~~~ 408 (479)
.++.+..+++|.++...+.
T Consensus 155 ~siWn~shNiGGal~~~~~ 173 (448)
T COG2271 155 WSIWNTSHNIGGALAPLVA 173 (448)
T ss_pred EEEehhhhhcccchHHHHH
Confidence 9999999999999887665
No 206
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.80 E-value=0.00026 Score=72.61 Aligned_cols=117 Identities=14% Similarity=0.150 Sum_probs=85.1
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCC
Q 011720 270 FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGN 349 (479)
Q Consensus 270 f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (479)
.+..+.++....+.++..++++..|++.|| +|||+....+...+.+ ...+.. . . . .. .
T Consensus 35 ~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r--~G~r~~~~~g~~l~~~-g~~l~~----~-~--~----------~~--~ 92 (410)
T TIGR00885 35 LTAFQAALVQSAFYGGYFIMAIPAAIFMKK--LSYKAGILLGLFLYAL-GAFLFW----P-A--A----------EI--M 92 (410)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHH-HHHHHH----H-H--H----------hh--c
Confidence 345567888888999999999999999999 7899977776544321 111110 0 0 0 11 2
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 350 DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
++.......++.|++.+..++....++.++. ++++|++..++.+..+++|..++..+.+
T Consensus 93 ~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lG~~~g~~i~~ 151 (410)
T TIGR00885 93 NYTLFLVGLFILTAGLGFLETAANPYILVMG-PESTATRRLNLAQSFNPFGSIIGMVVAQ 151 (410)
T ss_pred cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHC-CHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566667788888888887777888887 7788899999999999999998877653
No 207
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.79 E-value=0.00019 Score=68.57 Aligned_cols=115 Identities=17% Similarity=0.234 Sum_probs=87.0
Q ss_pred hhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 60 AANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 60 ~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
......+.......++.++.|.+.||+|||+.+..+...+.+......... .++.+.+++.|++.|++.+...+....+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP-NVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc-cchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 344556666677777779999999999999888888765333211111111 1347889999999999999998999999
Q ss_pred hhcCCCc-cchHhHHHHHHH-HHHhhhhhhhHHHhhhh
Q 011720 140 MTSYPTA-TRKGTYISLFWS-IFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 140 i~e~~~~-~~RG~~~g~~~~-~~~~G~~iG~~i~~~i~ 175 (479)
+.|..|+ ++|+...+.... ...+|.++++.+...+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887 789999999888 57888888886665543
No 208
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.79 E-value=0.00033 Score=73.27 Aligned_cols=105 Identities=20% Similarity=0.218 Sum_probs=77.3
Q ss_pred HHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhh--hccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCC--
Q 011720 70 TTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYY--NHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPT-- 145 (479)
Q Consensus 70 ~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~--~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~-- 145 (479)
....++.++.++++||+|+|+.+.++.++.++........ ...++.+.+++.-++.|++.+..++...++++|..|
T Consensus 277 i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~ 356 (473)
T PRK10429 277 AANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYG 356 (473)
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 4445667889999999999999988877655432222211 113456677788889999999999888899999866
Q ss_pred -----ccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 146 -----ATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 146 -----~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
.+..|..+|.+.....+|..+|+.+...+
T Consensus 357 e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 357 EYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred hHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345688999988899998888776544
No 209
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.78 E-value=0.00031 Score=70.36 Aligned_cols=115 Identities=13% Similarity=0.073 Sum_probs=78.5
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhhhhhhcc-chhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 57 DPTAANNANTALYTTFSVFGILGGGVYNIF-GPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 57 ~~~~~~~~~~~~~~~~aig~l~~g~l~d~~-Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
++...+...+....+..+++++.|++.||+ +||+.+.++.++..+....... ..+.+... .-++.|++.|...+.
T Consensus 230 ~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~l~g~~~g~~~~~ 305 (355)
T TIGR00896 230 SAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLF---APMHGLWA-WALVLGLGQGGAFPL 305 (355)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH---hhhhHHHH-HHHHHHHhhhhHhHH
Confidence 344555566677777888999999999999 5677777766655543222221 12222222 457789999888776
Q ss_pred hhhhhh-cCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 136 QGAIMT-SYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 136 ~~~~i~-e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
....+. +..+++++|...++.+....+|..+||.+...+.
T Consensus 306 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 306 ALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLH 346 (355)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 656555 4445677899999988888888888988776553
No 210
>PRK11043 putative transporter; Provisional
Probab=97.78 E-value=0.00099 Score=67.88 Aligned_cols=108 Identities=11% Similarity=-0.012 Sum_probs=72.6
Q ss_pred HHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhh--ccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcC
Q 011720 66 TALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYN--HHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSY 143 (479)
Q Consensus 66 ~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~--~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~ 143 (479)
.....+..++.++.+.+.||+|||+.+..+.+...+......... ..++.+.+++.-.+.|++.+...+.......|.
T Consensus 245 ~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (401)
T PRK11043 245 VPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRP 324 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 333445667788889999999999876655544333222221111 123455556667788888888777766666666
Q ss_pred CCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 144 PTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 144 ~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
. |++||+..|++......+...++.+...+
T Consensus 325 ~-~~~~g~~~g~~~~~~~~~~~~~~~~~g~l 354 (401)
T PRK11043 325 F-PQATGKAAALQNTLQLGLCFLASLLVSAL 354 (401)
T ss_pred C-cccChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5 56899999999988777777777766555
No 211
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.78 E-value=0.00041 Score=70.72 Aligned_cols=113 Identities=12% Similarity=-0.026 Sum_probs=81.7
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQG 137 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~ 137 (479)
+...+...+....+..+++++.+.+.||.++|+.+..+... .+ ...... ..++.+..++.-++.|++.+...+...
T Consensus 240 ~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~--~~~~~~-~~~~~~~~~~~~~~~G~~~g~~~~~~~ 315 (393)
T PRK11195 240 LNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GL--VVLLMA-LQHSLLPAYPLLILIGALGGFFVVPMN 315 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HH--HHHHHH-HHhHHHHHHHHHHHHHHhhhhhhhhHH
Confidence 34444555566666777888999999999999888777532 22 111111 234566677788899999998777677
Q ss_pred hhhhcCCCccc-hHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 138 AIMTSYPTATR-KGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 138 ~~i~e~~~~~~-RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
+.+.+..|++. +|+..++.+...++|..+|..+...+
T Consensus 316 ~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~ 353 (393)
T PRK11195 316 ALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL 353 (393)
T ss_pred HHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH
Confidence 77778766655 79999999999999999998877644
No 212
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.76 E-value=0.00036 Score=70.65 Aligned_cols=137 Identities=9% Similarity=-0.032 Sum_probs=94.8
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhc
Q 011720 63 NANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTS 142 (479)
Q Consensus 63 ~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e 142 (479)
..+++-...-++.-.+++.+.+|+|.|+.++++.++..+=.... +.+++.+.+.+.+.++|+-.++...+.-.|+++
T Consensus 263 ~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~---~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~ 339 (412)
T PF01306_consen 263 YLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGS---GFATNPWVISLIKLLHALEFPLLLVAAFKYITA 339 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH---HT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHH---hhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555666789999999999999999999877633222 246789999999999999999999999999999
Q ss_pred CCCccchHhHHHHH-HHHHHhhhhhhhHHHhhhhhccCCcccccc-hhHHHHHHHHHHHHHHHHhccC
Q 011720 143 YPTATRKGTYISLF-WSIFNMGGVVGGLIPFIMNYHRTDAESVND-KTYIAFMCFMSAGAALSLAILP 208 (479)
Q Consensus 143 ~~~~~~RG~~~g~~-~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~-~~~~i~~~l~~l~~~l~~~~~~ 208 (479)
..|++.......+. +...++|..+.+.+...+ +. +.+. .+|++...+.++..++..+.++
T Consensus 340 ~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~l-yd-----~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 340 HFDKRLSATLYLVGFQFAKQIGIIILSPLAGYL-YD-----RIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHH-HH-----HHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred hCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhh-Hh-----hcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 99988877766663 456677777766666544 21 1332 3566666655555556666554
No 213
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.75 E-value=2.8e-05 Score=76.24 Aligned_cols=107 Identities=14% Similarity=0.111 Sum_probs=74.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhH
Q 011720 275 RGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGP 354 (479)
Q Consensus 275 ~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (479)
.|+....+++.+++.++..|.++|| .|||+.+..+..... +...+|+ .. .++++.
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~--yGRkpvll~c~~~va-~s~ll~~--------------------~S--~~F~af 124 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDR--YGRKPVLLACLIGVA-LSYLLWA--------------------LS--RNFAAF 124 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhh--hCchHHHHHHHHHHH-HHHHHHH--------------------HH--HHHHHH
Confidence 4666778899999999999999999 689997776654432 2223331 01 234222
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 355 FVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
...=+..|++.+.... ..++++|+. ++++|+.+++......++|..++-.++
T Consensus 125 v~aR~l~Gi~kgnl~v-~rAiisdV~-sek~r~l~ms~v~~a~~lGfilGPmIG 176 (451)
T KOG2615|consen 125 VLARFLGGIFKGNLSV-IRAIISDVV-SEKYRPLGMSLVGTAFGLGFILGPMIG 176 (451)
T ss_pred HHHHHhhhhccCchHH-HHHHHHhhc-Chhhccceeeeeehhhhcchhhcchhh
Confidence 2223556777766554 788999999 679999999988777777776665555
No 214
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.73 E-value=0.00017 Score=72.80 Aligned_cols=145 Identities=13% Similarity=-0.000 Sum_probs=87.1
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCC
Q 011720 270 FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGN 349 (479)
Q Consensus 270 f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (479)
.+..+.++....+.++..++.+..|++.|| +|||+... +........ .. ... .. .
T Consensus 23 ~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr--~grr~~~~-~~~~~~~~~-~~----~~~---------------~~--~ 77 (368)
T TIGR00903 23 VSKEELGLLAITYPAAFLALTIPSGLLLDR--AFKRWFLF-GSLATFAAA-AG----RLL---------------DP--F 77 (368)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccchHHHH-HHHHHHHHH-HH----HHH---------------Hh--c
Confidence 355566777777888999999999999999 67887533 221111110 00 000 01 2
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCcc--hhHHHHHHHHHHHh
Q 011720 350 DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDTHKVS--LLSQLIINWSLTTV 427 (479)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~--~~~~~~i~~~~~~~ 427 (479)
++....+.-++.|++.+... .....+++.+ |+++|+++.++......+|..++..+.+...+ .|+.. .+..-++
T Consensus 78 ~~~~l~~~R~l~G~g~~~~~-~~~~~~~~~~-~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~--f~~~~~l 153 (368)
T TIGR00903 78 NYEWLLACQLLAALGQPFLL-NAFAPAASQI-REERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLL--IIPIAAV 153 (368)
T ss_pred cHHHHHHHHHHHHhHhHHHH-HHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH--HHHHHHH
Confidence 23445555666777776543 3455568888 78999999999999999999998776653222 23321 1111111
Q ss_pred hhhhhheeeeeEeccCC
Q 011720 428 SYPLLVVLVMLAVKDDD 444 (479)
Q Consensus 428 ~~~~~~~~v~~~~pet~ 444 (479)
.. +...+.++++||+.
T Consensus 154 ~~-~~~~~~~~~lp~~p 169 (368)
T TIGR00903 154 AA-AGIILVLAALPALP 169 (368)
T ss_pred HH-HHHHHHHHHcCCCC
Confidence 11 22344566789874
No 215
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.72 E-value=0.00032 Score=81.56 Aligned_cols=118 Identities=11% Similarity=0.012 Sum_probs=89.5
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhh-----------------hccCchhhHHH
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYY-----------------NHHHDQTFAVV 120 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~-----------------~~~~~~~~li~ 120 (479)
+...+...+....+..++.++.+.++|+.++++.+.++.++..+....+... ....+.+.+++
T Consensus 260 ~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (1140)
T PRK06814 260 ENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILI 339 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHH
Confidence 3445555666777778889999999998887776666655444322222110 01156778888
Q ss_pred HHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 121 AGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 121 ~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
+-++.|++.+...+...+++.+.+|++.||+.+|.+++...+|..+|+++...+.
T Consensus 340 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 340 DLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888999999999999999999999999999999998876553
No 216
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.70 E-value=2.9e-05 Score=80.97 Aligned_cols=116 Identities=13% Similarity=0.089 Sum_probs=82.8
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCC
Q 011720 270 FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGN 349 (479)
Q Consensus 270 f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (479)
++..+.++....+.++..++.++.|++.|| +|||+....+.....+.. .+. .+ . .. .
T Consensus 73 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr--~g~r~~l~~~~~~~~~~~-~~~----~~----~----------~~--~ 129 (465)
T TIGR00894 73 WSGALQGLILSSHFYGQIIIQIPVGYLAGK--YVFKWSIGIGMFLSSVIS-IVI----PW----A----------AG--G 129 (465)
T ss_pred CCHHHhhHHHHHHHHHHHHHHcchHHHHHH--hCcchhhHHHHHHHHHHH-HHH----HH----H----------HH--c
Confidence 344566777778899999999999999999 788886665543321111 110 00 0 01 2
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 350 DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
.+...++.-++.|+..+...+....++++.+ |+++|+++.++......+|..++..+..
T Consensus 130 ~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~i~~~l~~ 188 (465)
T TIGR00894 130 GIALVVFCRVIQGLAQGSVSPATHKIIVKWA-PPKERSRLLGMSTSGFQLGTFIFLPISG 188 (465)
T ss_pred CchHHHHHHHHHHHhcccchhhHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2344566677889999888888888899999 8899999999999888888888766553
No 217
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.69 E-value=0.0006 Score=69.11 Aligned_cols=114 Identities=16% Similarity=0.051 Sum_probs=72.9
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh-h
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG-Q 136 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~-~ 136 (479)
+...+...+....+..++.++.+++.||+|+|+.+.++..+..+....... ..++.+..++..++.|+|.....+. .
T Consensus 234 ~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~ 311 (382)
T PRK10091 234 ETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFF--FGGMKTASLIFAFICCAGLFALSAPLQ 311 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 444555556666677888999999999999999998887765542222211 1234455566666777766544332 2
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
.....+..+++.++... ......+|..+|+.+...+.
T Consensus 312 ~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~ 348 (382)
T PRK10091 312 ILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMML 348 (382)
T ss_pred HHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHH
Confidence 23444544555566543 35677899999998887653
No 218
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.66 E-value=0.0012 Score=65.06 Aligned_cols=114 Identities=14% Similarity=0.081 Sum_probs=78.5
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAG 135 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~ 135 (479)
.++.......+....++.+|.++.+++.||+|+|+.+.++.++.++....... .++.. ...+=++.|++.+..++.
T Consensus 175 ~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~---~~~~~-~~~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 175 LPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAAL---THGYV-AMWFVLALGLFNSIMFPT 250 (310)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH---cCCHH-HHHHHHHHHHHHHHHHHH
Confidence 34556666677888889999999999999999999888887765553222211 12222 233555789999999888
Q ss_pred hhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 136 QGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 136 ~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
..+...+..|+ +.+++.++. ....+|..++|.+...+.
T Consensus 251 ~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~la 288 (310)
T TIGR01272 251 IFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLA 288 (310)
T ss_pred HHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHH
Confidence 77777766543 355666665 455688888887665553
No 219
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.65 E-value=0.0011 Score=67.65 Aligned_cols=104 Identities=13% Similarity=0.021 Sum_probs=71.9
Q ss_pred HHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCcc
Q 011720 68 LYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTAT 147 (479)
Q Consensus 68 ~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~ 147 (479)
.-.+..++.++.+.+.||.+ |+.+..+..+.......... ..++.+.+++..++.|++.+...+...+++.+..| +
T Consensus 261 ~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~ 336 (394)
T PRK10213 261 FGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTL--WGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-D 336 (394)
T ss_pred HHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-c
Confidence 33345566678888888854 44444444433321111111 13457788889999999999988888878887775 5
Q ss_pred chHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 148 RKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 148 ~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
++++..+++....++|..+|+.++..+.
T Consensus 337 ~~~~~~~~~~~~~~lg~~~G~~l~G~l~ 364 (394)
T PRK10213 337 QAEKAGSIQVAVIQLANTCGAAIGGYAL 364 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888888888999999999988764
No 220
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.64 E-value=0.00096 Score=63.15 Aligned_cols=106 Identities=17% Similarity=0.124 Sum_probs=73.5
Q ss_pred HHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhh-h-c--cCchhhHHHHHHHHhhhhhhhhhhhhhhhhc
Q 011720 67 ALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYY-N-H--HHDQTFAVVAGAVLGIGAGLLWAGQGAIMTS 142 (479)
Q Consensus 67 ~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~-~-~--~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e 142 (479)
.-..+..+ .+++|.+.|++|+|.++.+|++...+.-...... . . ..+.|.+.+.-++.|.|.+...++.-....+
T Consensus 45 ~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~ 123 (250)
T PF06813_consen 45 AGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVR 123 (250)
T ss_pred HHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHH
Confidence 33344444 4889999999999999999987655433332222 1 1 2467888888888888877766666555567
Q ss_pred CCCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 143 YPTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 143 ~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
++| ++||+..|+.-....++..+=..+...+
T Consensus 124 NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 124 NFP-RSRGTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred hCc-cccCceehhhhHHHHhHHHHHHHHHHHH
Confidence 775 6899999999888888776654444444
No 221
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.63 E-value=0.00039 Score=71.26 Aligned_cols=105 Identities=20% Similarity=0.245 Sum_probs=83.8
Q ss_pred HHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCc
Q 011720 67 ALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTA 146 (479)
Q Consensus 67 ~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~ 146 (479)
+.+.+--+.=++.+.+.+|+|+-+++.++..++.+ =+++....+|.|+.+..-+++|+..+..|.+..+|++..+||
T Consensus 414 ~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~---Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp 490 (618)
T KOG3762|consen 414 LCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVG---RFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPP 490 (618)
T ss_pred hhccchHHHHHHHHHHHHHhcccceeeehhhHHHH---HHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 33444444446788999999999999999887764 344333458999999999999999999999999999999999
Q ss_pred cchHhHHHHHHHHH-HhhhhhhhHHHhhh
Q 011720 147 TRKGTYISLFWSIF-NMGGVVGGLIPFIM 174 (479)
Q Consensus 147 ~~RG~~~g~~~~~~-~~G~~iG~~i~~~i 174 (479)
+.|..+-++..... .+|--+|++|+..+
T Consensus 491 ~l~at~Q~l~~g~f~GlG~g~GslIGG~~ 519 (618)
T KOG3762|consen 491 GLRATAQGLLQGIFHGLGKGLGSLIGGFV 519 (618)
T ss_pred cchHHHHHHHHHHhcccCcchhhhhhhhh
Confidence 99999999887654 56666666666644
No 222
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.59 E-value=0.01 Score=55.89 Aligned_cols=66 Identities=23% Similarity=0.372 Sum_probs=51.5
Q ss_pred hhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhh-hhhhhcCC
Q 011720 75 FGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQ-GAIMTSYP 144 (479)
Q Consensus 75 g~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~-~~~i~e~~ 144 (479)
...+.|.++|+.|||+.-+.-++.|++ +++.- .++.+-.++++|++.|++.+....+- .-++.|.-
T Consensus 88 FGtivgSLaDkqGRKracvtycitYiL---sCiTK-hSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 88 FGTIVGSLADKQGRKRACVTYCITYIL---SCITK-HSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHhhhccccceeeehHHHHH---HHHhh-cCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 346789999999999998887777765 55543 57778889999999999999976654 44666754
No 223
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.54 E-value=0.0022 Score=68.16 Aligned_cols=105 Identities=17% Similarity=0.142 Sum_probs=81.6
Q ss_pred HHHHHHhhhhhhhhhhccch-hHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCcc
Q 011720 69 YTTFSVFGILGGGVYNIFGP-RVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTAT 147 (479)
Q Consensus 69 ~~~~aig~l~~g~l~d~~Gr-k~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~ 147 (479)
..+..+++++.+.+..+++| ||.++++++.+.++.++.... ..+|....+..-++.|+|.|...........-..|++
T Consensus 359 ~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~-~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~ 437 (599)
T PF06609_consen 359 GFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAV-RPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDE 437 (599)
T ss_pred HHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHc-cCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCch
Confidence 34456677888889988887 888889988877766654433 2456667788899999999987666555566667899
Q ss_pred chHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 148 RKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 148 ~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
+.|..+|+..+...+|..+|..+...+
T Consensus 438 ~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 438 DIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 999999999999999999998876644
No 224
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.54 E-value=0.00025 Score=75.08 Aligned_cols=140 Identities=14% Similarity=0.152 Sum_probs=91.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchh
Q 011720 274 TRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAG 353 (479)
Q Consensus 274 ~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (479)
...+....+.+|.++|+++.|.++|| +|||+..+++.....+.. +. .++ . +++..
T Consensus 119 ~~~~~~s~~~~G~~vG~~i~g~lsD~--~GRk~~~~~~~~~~~i~~--~~---~a~----------------a--~~~~~ 173 (521)
T KOG0255|consen 119 LVALGQSLFFLGVLVGSLIFGPLSDR--FGRKPVLLVSLLLFIIFG--IL---TAF----------------A--PNYWM 173 (521)
T ss_pred HHHHHHHHHHHHHHHHHhhheehHhh--cccHHHHHHHHHHHHHHH--HH---HHH----------------h--CcHHH
Confidence 45566778899999999999999999 899998887765432221 11 111 1 45566
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccCcchhHHHHHHHHHHHhhhhhhh
Q 011720 354 PFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDTHKVSLLSQLIINWSLTTVSYPLLV 433 (479)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 433 (479)
..++=++.|++.++.....+.+..|+. ++++|+.+.++ ......+..+.........+.|+.+ .|...+.+.+..
T Consensus 174 ~~~~Rfl~G~~~~~~~~~~~~~~~E~~-~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~--~~~~~~~~~~~~- 248 (521)
T KOG0255|consen 174 FLIFRFLSGFFGSGPLTVGFGLVAEIV-SPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWL--FWIISIPSGLFL- 248 (521)
T ss_pred HHHHHHHHHhhccchhHHhHhhheeec-CcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHH--HHHHHHHHHHHH-
Confidence 677778899999999998999999999 78999999887 5555555555544443333345433 333222222111
Q ss_pred eeeeeEeccCC
Q 011720 434 VLVMLAVKDDD 444 (479)
Q Consensus 434 ~~v~~~~pet~ 444 (479)
+.+++.||+.
T Consensus 249 -~~~~l~~Es~ 258 (521)
T KOG0255|consen 249 -LLWFLPPESP 258 (521)
T ss_pred -HHHHccCcCh
Confidence 1156667883
No 225
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.49 E-value=5.3e-05 Score=76.20 Aligned_cols=114 Identities=20% Similarity=0.224 Sum_probs=88.9
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCC
Q 011720 271 NLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGND 350 (479)
Q Consensus 271 ~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (479)
+....++....+.++..++++++|++.|| ..||+.+.+|...-..+ ..+.+. . ..
T Consensus 66 ~~s~~Gll~~vf~v~~~i~sPl~gyLadr--yNR~~v~~vG~~iW~~A---v~~~~f-----------------s---~~ 120 (493)
T KOG1330|consen 66 SDSELGLLQTVFIVVFMIASPLFGYLADR--YNRKRVIAVGIFIWTLA---VFASGF-----------------S---NH 120 (493)
T ss_pred CchhccchhHHHHHHHHHHHHHHHHHHhh--cCcceEEeeHHHHHHHH---HHHHHH-----------------H---HH
Confidence 34456888889999999999999999999 56988877775432111 111001 0 12
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 011720 351 FAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDTH 410 (479)
Q Consensus 351 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~ 410 (479)
++...++=.+.|++-+.+.+....+++..+ +.++|++.++++++....|..+++.++..
T Consensus 121 Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f-~~~~Rs~~~~ify~~ipvGsglG~vvgs~ 179 (493)
T KOG1330|consen 121 FWQVLLCRGFVGIGEASYSPIAPSLIADSF-PDDKRSRVLGIFYFAIPVGSGLGYVVGSV 179 (493)
T ss_pred HHHHHHHHHHhccchhhhcccchhHhhhcC-cchhhhHHHHHhhhhcccccceeEEeeee
Confidence 455666667899999999999999999999 77899999999999999999999998853
No 226
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.42 E-value=0.0007 Score=73.36 Aligned_cols=135 Identities=15% Similarity=0.074 Sum_probs=86.8
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCC--------------
Q 011720 271 NLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHD-------------- 336 (479)
Q Consensus 271 ~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 336 (479)
+..+.+++...+.++..++.++.+++.|| .+||+.+.+|.+.+.+. .++....-.+..+|..+
T Consensus 66 ss~~~G~i~s~~~i~~~~~~i~v~~~~~r--~~r~~~i~~g~ll~~lg-~ll~alphf~~~~y~~~~~~~~~~~~~~~~~ 142 (633)
T TIGR00805 66 STSSSGLINGSYEIGNLLLIIFVSYFGTK--LHRPIVIGIGCAIMGLG-SFLLSLPHFLSGRYSYSTTVSSTGNLSSANS 142 (633)
T ss_pred CCCcceeeeehhhHHHHHHHHHHHHhhcc--cCcceEEEecHHHHHHH-HHHHhChHHhcCCcccccccccccccccccc
Confidence 44566777778899999999999999999 67888777776554322 22211000001111100
Q ss_pred -----C--CC--Ccc---ccc-CC--CCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHH
Q 011720 337 -----D--PP--KRL---DFK-TS--GNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGA 401 (479)
Q Consensus 337 -----~--~~--~~~---~~~-~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~ 401 (479)
+ .+ +.. +.. +. ...+...++.-++.|++.+...+....++.+.+ ++++|+++.+++.....+|.
T Consensus 143 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~-~~~~~~~~~~i~~~~~~iG~ 221 (633)
T TIGR00805 143 FLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFA-KSKNSPLYIGILESIAVFGP 221 (633)
T ss_pred ccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccC-CccccHHHHHHHHHHHHhhh
Confidence 0 00 000 000 00 012334455668899999998888889999999 78899999999999999999
Q ss_pred HHHhhhcc
Q 011720 402 AVAWQVDT 409 (479)
Q Consensus 402 ~i~~~~~~ 409 (479)
++++.+..
T Consensus 222 ~lG~llgg 229 (633)
T TIGR00805 222 AFGYLLGS 229 (633)
T ss_pred HHHHHHHH
Confidence 98877653
No 227
>PRK10133 L-fucose transporter; Provisional
Probab=97.40 E-value=0.0021 Score=66.61 Aligned_cols=116 Identities=15% Similarity=0.082 Sum_probs=82.2
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCC
Q 011720 270 FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGN 349 (479)
Q Consensus 270 f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (479)
.+..+.++....+.++..++.++.|++.|| +|||+....+....... ..+.. .. . .. +
T Consensus 58 ~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr--~G~r~~l~~g~~~~~~~-~~l~~--~~--------------~-~a--~ 115 (438)
T PRK10133 58 LTNFQAGLIQSAFYFGYFIIPIPAGILMKK--LSYKAGIITGLFLYALG-AALFW--PA--------------A-EI--M 115 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHH-HHHHH--HH--------------H-hc--C
Confidence 355567888888999999999999999999 78999777765443211 11110 00 0 11 3
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 350 DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
++......-++.|++.+...+..+.++.+.. +.++|.+..++.+...++|..++..+.
T Consensus 116 ~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~-~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 116 NYTLFLVGLFIIAAGLGCLETAANPFVTVLG-PESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC-ChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666677788888888887787777766 555666678899999999999887664
No 228
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.39 E-value=0.022 Score=57.55 Aligned_cols=294 Identities=14% Similarity=0.088 Sum_probs=140.2
Q ss_pred hhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHH
Q 011720 76 GILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISL 155 (479)
Q Consensus 76 ~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~ 155 (479)
.++++++.+|..-+.-..+..+... .+++..+.++|.++-+++-++.+++.|.-=..--.+. ...++ ...+-
T Consensus 76 Kl~aP~fi~~v~y~~Ri~~~~~l~~---~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt-~~y~~----~~l~~ 147 (402)
T PF02487_consen 76 KLIAPFFIHRVPYWIRILICVALSA---AGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLT-HFYGK----SSLSA 147 (402)
T ss_pred HHHhHhhhhhccchHHHHHHHHHHH---HHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHH-HhcCc----ccccc
Confidence 3668888888764332233333222 2444444568888888999999998887333222332 23332 34666
Q ss_pred HHHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccC-Cccc---ccC---CCCcc---ccc-
Q 011720 156 FWSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILP-PSRV---IRD---DGTRC---TNI- 223 (479)
Q Consensus 156 ~~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~-~~~~---~r~---d~~~~---~~~- 223 (479)
|.+....+.++|+..-.++.. ..++-+ ...+...+.++-.+..++++| |+.. .+. ++.+. +.+
T Consensus 148 wssGTG~aGl~Ga~~y~~lT~-----~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (402)
T PF02487_consen 148 WSSGTGGAGLVGALYYLGLTT-----LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEAEDDLLESET 222 (402)
T ss_pred ccCCcChhhHHHHHHHHHHHH-----hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCccccccccccc
Confidence 766667777777766554432 123222 333333333332223333444 2211 110 00000 000
Q ss_pred ---c-cCCHHHHHHHHHHHhhchHHHHHHHHHH--Hhhh-hhhccccccc-c-ccccchh-hhHHHHHHHHHHHHHHHHh
Q 011720 224 ---K-YSKVSTEAIEILKLFRNWKMLLLFPAAW--ASNF-FYSYQFNNVN-G-LMFNLRT-RGLNNVFYWGAQMLGSVGI 293 (479)
Q Consensus 224 ---~-~~~~~~~~~~~~~~~~~~r~ll~~~~~~--~~~~-~~s~~~~~~~-~-~~f~~~~-~~l~~~~~~i~~~i~~~~~ 293 (479)
+ +...+..+++.++..+ +-+....|+.. +..+ ......++.. + ..++.++ -..+...|.+|.+++.--.
T Consensus 223 ~~~~~~~~~~~~~~~k~~~~k-~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~ 301 (402)
T PF02487_consen 223 SESKPDSSSKLSFKEKLKRLK-PLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQLGVFISRSSL 301 (402)
T ss_pred ccccccccchhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHHHHhhhhcce
Confidence 0 0011112232233221 11123334332 1111 1122222221 1 1122222 2356677888777765422
Q ss_pred hhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHHHHHHHH
Q 011720 294 GYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAMFQSMVY 373 (479)
Q Consensus 294 g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 373 (479)
. +. ++ |+..+... +..+.++++. ++.-| ++. ++.+.++++.++-|+..+......+
T Consensus 302 ~-~~---ri--r~lwils~--LQ~~nl~~~~----l~s~~---------~fi---psi~ivf~lif~eGLlGGa~YVNtF 357 (402)
T PF02487_consen 302 P-FF---RI--RRLWILSL--LQVINLVFLL----LQSWY---------RFI---PSIWIVFVLIFYEGLLGGASYVNTF 357 (402)
T ss_pred e-ee---eh--hhHHHHHH--HHHHHHHHHH----HHHHH---------HHh---hHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 1 11 12 22223221 1112222211 11101 122 4456677777777877777766677
Q ss_pred HHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 374 WVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 374 ~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
..+.+-. ++++|.-+.+......++|.+++-.++
T Consensus 358 ~~I~~~~-~~~~REFslg~vsvsds~GI~lAgll~ 391 (402)
T PF02487_consen 358 YRISEEV-PPEDREFSLGAVSVSDSLGILLAGLLG 391 (402)
T ss_pred HHHHhcC-CHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 6677766 789999999999998999888887665
No 229
>PTZ00207 hypothetical protein; Provisional
Probab=97.37 E-value=0.0015 Score=69.54 Aligned_cols=96 Identities=10% Similarity=0.022 Sum_probs=63.2
Q ss_pred HHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhHHH
Q 011720 288 LGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLDAM 367 (479)
Q Consensus 288 i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 367 (479)
+..++.|++.|| +|||+...++.+...+.....+ +.. . +... .+++..++..++.|++.+.
T Consensus 76 ~~~lp~G~L~Dr--~G~R~vllig~ll~~iG~ll~a---la~----~--------~~i~--~s~~~l~l~r~l~G~G~~~ 136 (591)
T PTZ00207 76 YFLLPYSFIYDY--LGPRPIFVLSMTVFCLGTLLFA---LTF----Q--------EVIE--GSVVRLSVYNGLMTLGCML 136 (591)
T ss_pred HHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHH---HHh----c--------cccc--CcHHHHHHHHHHHHHHHHH
Confidence 345568999999 7899988877654322221111 111 1 0011 3445555666677888777
Q ss_pred HHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHH
Q 011720 368 FQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVA 404 (479)
Q Consensus 368 ~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~ 404 (479)
..+.....+.+.+ |++|+++.|+.+....+|.++.
T Consensus 137 ~~~~~~~~i~~~F--p~~RG~a~Gi~~~~~gLGsaI~ 171 (591)
T PTZ00207 137 FDLGAVVTVLSVF--PSNRGAVVAIMKTFTGLGSAIL 171 (591)
T ss_pred HHHHHHHHHHHhC--hhhhHHHHHHHHHHHHHHHHHH
Confidence 7776666677777 5789999999999999999763
No 230
>PRK11462 putative transporter; Provisional
Probab=97.37 E-value=0.0033 Score=65.59 Aligned_cols=107 Identities=11% Similarity=-0.002 Sum_probs=66.8
Q ss_pred HHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCC-
Q 011720 67 ALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPT- 145 (479)
Q Consensus 67 ~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~- 145 (479)
.......++.+++++++||+|+|+.+..+..+..+........ ...+...+++.-++.|++.+...+.....+.|..+
T Consensus 271 ~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~ 349 (460)
T PRK11462 271 TYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFV-PMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDY 349 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Confidence 3344445677899999999999988775554333311121111 12233344555577788877766666667777665
Q ss_pred ------ccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 146 ------ATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 146 ------~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
++..|...+.+.....+|..+|+.+...+
T Consensus 350 ~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 350 GEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred hHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345666777777888888888776644
No 231
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.35 E-value=0.0025 Score=67.22 Aligned_cols=97 Identities=7% Similarity=-0.019 Sum_probs=71.3
Q ss_pred hhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhc------cCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccch
Q 011720 76 GILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNH------HHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRK 149 (479)
Q Consensus 76 ~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~------~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~R 149 (479)
..+.+.+.+|++.++.+.+|.++..+.......... .-|.+.++..+++.|+|.....+....++.+.+|++.|
T Consensus 337 ~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~r 416 (500)
T PRK09584 337 AAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLM 416 (500)
T ss_pred HHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHH
Confidence 344566667776667777777765552222111110 01356789999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhhhhhhhHHHh
Q 011720 150 GTYISLFWSIFNMGGVVGGLIPF 172 (479)
Q Consensus 150 G~~~g~~~~~~~~G~~iG~~i~~ 172 (479)
|+.+|.+.....+|+.+++.+..
T Consensus 417 g~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 417 GFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888887776654
No 232
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.34 E-value=1.3e-05 Score=82.98 Aligned_cols=112 Identities=11% Similarity=0.103 Sum_probs=79.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhH
Q 011720 275 RGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGP 354 (479)
Q Consensus 275 ~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (479)
.++......++.++|+++.|++.|| +|||+..+.+...+.+.. .+. . +.+ + . .++...
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~--~GRk~~~~~~~~~~~i~~-~~~-------~-~~~-------~-~---~~~~~~ 105 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADR--YGRKPALIISALLMIIGS-ILI-------A-FAP-------S-Y---NNFWML 105 (451)
T ss_pred HHHHHHHHHhhhccccccccccccc--cccccccccccccccccc-ccc-------c-ccc-------c-c---cccccc
Confidence 4566677889999999999999999 789998777755432111 110 0 110 0 0 023344
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 355 FVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
.+.-++.|++.+...+....++.|+. |+++|++..++......+|..++..+..
T Consensus 106 ~~~R~~~G~~~g~~~~~~~~~~~E~~-~~~~R~~~~~~~~~~~~~G~~~~~~~~~ 159 (451)
T PF00083_consen 106 LIGRFLIGFGIGGAYVVSPIYISEIA-PPKHRGFLSSLFQLFWALGILLASLIGY 159 (451)
T ss_pred cccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence 45556788888888888888999999 8899999998888888888877777654
No 233
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.34 E-value=0.00056 Score=67.71 Aligned_cols=112 Identities=17% Similarity=0.100 Sum_probs=84.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCch
Q 011720 273 RTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFA 352 (479)
Q Consensus 273 ~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (479)
.+.|+......+.+++.+++.|.+.|| +|+|...++|+..+... .++++ + . .+++
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~--iGy~ipm~~Gl~vmf~s-TilFa----f---------------g---~sy~ 160 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDR--IGYKIPMVAGLFVMFLS-TILFA----F---------------G---NSYP 160 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHH--hccccHHHHHHHHHHHH-HHHHH----H---------------c---chhH
Confidence 356888889999999999999999998 89999999998766422 22221 1 1 2345
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 353 GPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
..++.=.+.|.++++..+.-.+.+++.+.+..+|++++|+.-...++|..++.-++.
T Consensus 161 ~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGG 217 (464)
T KOG3764|consen 161 MLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGG 217 (464)
T ss_pred HHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCccc
Confidence 556666789999999998888889988855567899999888877777777655553
No 234
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.34 E-value=0.0012 Score=69.40 Aligned_cols=102 Identities=14% Similarity=0.162 Sum_probs=75.9
Q ss_pred HHhhhhhhhhhhccchhHH-------HhhhhHHHHHHHHH-----HHhhhc--cCchhhHHHHHHHHhhhhhhhhhhhhh
Q 011720 73 SVFGILGGGVYNIFGPRVT-------LAAGCSTYVLYAGS-----FLYYNH--HHDQTFAVVAGAVLGIGAGLLWAGQGA 138 (479)
Q Consensus 73 aig~l~~g~l~d~~Grk~~-------l~ig~~~~~i~~~~-----~~~~~~--~~~~~~li~~R~i~G~g~g~~~~~~~~ 138 (479)
.+.+++.+.+.||+|||+. +.+|.++..+.... ...... ..+.+.++..-++.|+|.++..+....
T Consensus 323 ii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~ 402 (489)
T PRK10207 323 VVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLA 402 (489)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 3556667899999999863 55555443321110 111111 134677888999999999999999999
Q ss_pred hhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 139 IMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 139 ~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
++.+.+|++.+|.++|+++...++|..+|..++...
T Consensus 403 ~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 403 MIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998877543
No 235
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.23 E-value=0.11 Score=51.56 Aligned_cols=94 Identities=13% Similarity=0.024 Sum_probs=50.4
Q ss_pred hhhhhhhh-----ccchhHHHhhhhHHHHHHHHH-HH--hhh-------ccCchhhHHHHHHHHhhhhhhhhhhhhhhhh
Q 011720 77 ILGGGVYN-----IFGPRVTLAAGCSTYVLYAGS-FL--YYN-------HHHDQTFAVVAGAVLGIGAGLLWAGQGAIMT 141 (479)
Q Consensus 77 l~~g~l~d-----~~Grk~~l~ig~~~~~i~~~~-~~--~~~-------~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~ 141 (479)
+.+.|+.| |+|||++-++-+-. .+.... ++ +.+ ..++...+...=++.=+.++.-=.+.-...-
T Consensus 81 llWaPiVDs~y~k~~GrrksWvvp~q~-llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwAL 159 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVVPCQY-LLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWAL 159 (510)
T ss_pred HHHHhhhHHHHHHhhccccceeeehHH-HHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 68999999 99999986654431 110001 01 110 0112222222223344444443344444555
Q ss_pred cCCCccchHhHHHHHHHHHHhhhhhhhHHH
Q 011720 142 SYPTATRKGTYISLFWSIFNMGGVVGGLIP 171 (479)
Q Consensus 142 e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~ 171 (479)
.+-.|++-|-+........+.|..+|+.+-
T Consensus 160 tmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 160 TMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 556788888888877666666666666543
No 236
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.23 E-value=0.0027 Score=66.48 Aligned_cols=62 Identities=15% Similarity=0.185 Sum_probs=57.2
Q ss_pred CchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 113 HDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 113 ~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
.|.+.+++..++.|+|.....+....++++.+|++.||+++|++.....+|..+|+.+....
T Consensus 379 ~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~ 440 (475)
T TIGR00924 379 TSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFG 440 (475)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999998876644
No 237
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.17 E-value=0.0054 Score=63.05 Aligned_cols=115 Identities=10% Similarity=-0.057 Sum_probs=83.0
Q ss_pred cccchh-hhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCC
Q 011720 269 MFNLRT-RGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTS 347 (479)
Q Consensus 269 ~f~~~~-~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (479)
+++..+ .+.+.-.+..+..+.-++.|.+.|| +|-|+.+..+.+.-.++. ++ . .+.
T Consensus 57 glT~~qv~G~I~s~F~ysYal~qIp~GlLaDr--lG~K~vL~l~~l~Wsl~t-~L----~---------------~fa-- 112 (511)
T TIGR00806 57 NFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY--LRYKPVLVLQALSFVCVW-LL----L---------------LLG-- 112 (511)
T ss_pred CCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHHHH-HH----H---------------HHH--
Confidence 455556 6777777888888999999999999 666664444332211111 11 1 111
Q ss_pred CCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc
Q 011720 348 GNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDTH 410 (479)
Q Consensus 348 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~ 410 (479)
.+.....++=+++|++.+... ..+.++...+ |+++|+++.|+.+....+|.+++..+.+.
T Consensus 113 -~Sl~~L~i~R~llGvaEA~~~-A~~syI~~Wf-P~kER~ratsi~~sg~~vG~~Ia~~L~ql 172 (511)
T TIGR00806 113 -TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLV-PPSRYQRAAAYSRAAVLLGVFLSSVLGQL 172 (511)
T ss_pred -HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234556777788999998888 6788899999 89999999999999999999999877653
No 238
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.14 E-value=0.0012 Score=68.89 Aligned_cols=117 Identities=15% Similarity=0.102 Sum_probs=72.1
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCC
Q 011720 269 MFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSG 348 (479)
Q Consensus 269 ~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (479)
+++..+.+.....+.....++.+++|++.||. .|||+....|...+. +...+ +. .. + ..
T Consensus 41 gls~~~a~~i~~~~~~~~~l~~ligG~LaDRi-lGrrr~iliG~il~~-lg~ll----l~----~~--------~-~~-- 99 (493)
T PRK15462 41 KYDDNHAYELFSAYCSLVYVTPILGGFLADKV-LGNRMAVMLGALLMA-IGHVV----LG----AS--------E-IH-- 99 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCcHHHHHHHHHHHH-HHHHH----HH----Hh--------h-cc--
Confidence 34555666777777888888999999999993 289987766654432 11111 10 00 0 00
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCc--hhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 349 NDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDS--ETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~--~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
... ......+..++.+...+....+++|++ |+ ++|.++++++....++|..++..+.+
T Consensus 100 ~~~--~~l~l~li~iG~G~~~~~~~alv~elf-p~~~~~R~sgf~i~Y~~~nlG~~iap~l~g 159 (493)
T PRK15462 100 PSF--LYLSLAIIVCGYGLFKSNVSCLLGELY-EPTDPRRDGGFSLMYAAGNVGSIIAPIACG 159 (493)
T ss_pred hhH--HHHHHHHHHHhcccccccHHHHHHHHC-CCCCccccceehHHHHHHHHHHHHHHHHHH
Confidence 111 111111222334444555667889999 43 36889999999999998888877654
No 239
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.13 E-value=0.0029 Score=59.94 Aligned_cols=118 Identities=14% Similarity=0.018 Sum_probs=68.9
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCC
Q 011720 270 FNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGN 349 (479)
Q Consensus 270 f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (479)
++.++.......-.+|.-+| +..|.+.|+ .|.|..+.+|.+....--.++|. . +.+. ..+ +
T Consensus 34 ~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~--~gp~~~l~iG~~~~~~GY~~~~l---~----~~~~-------i~~--~ 94 (250)
T PF06813_consen 34 YSQSQLNTLSTAGDIGSYFG-ILAGLLYDR--FGPWVVLLIGAVLGFVGYGLLWL---A----VSGR-------IPS--L 94 (250)
T ss_pred CCHHHHHHHHHHHHHHhhcc-HHHHHHHHh--cchHHHHHHHHHHHHHHHHHHHH---H----HhCc-------cCc--c
Confidence 44444455555667777665 778999999 67887777775443221112221 1 1111 112 3
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 350 DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
.++...+..+..+...+..++......-+-| |++|+++.++.+....+++++-..+.
T Consensus 95 ~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NF--P~~RG~vvgilk~~~GLSaai~t~i~ 151 (250)
T PF06813_consen 95 PVWLMCLFLFLGGNSSCWFNTASLVTCVRNF--PRSRGTVVGILKGFFGLSAAIFTQIY 151 (250)
T ss_pred chHHHHHHHHHHcccHHHhhhHHHHHHHHhC--ccccCceehhhhHHHHhHHHHHHHHH
Confidence 4444444444444444444443332233555 67899999999999999998876654
No 240
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.12 E-value=0.002 Score=68.23 Aligned_cols=108 Identities=16% Similarity=0.126 Sum_probs=81.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHH
Q 011720 276 GLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPF 355 (479)
Q Consensus 276 ~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (479)
++......++..+++++.|+++|+ +|||+.++.+.+... +...+. .+ . .++....
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~--~GRk~~l~~~~~~~~-iG~ii~----~~----------------a--~~~~~l~ 146 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDR--IGRKKTLLLAVVLFL-IGAIII----AL----------------A--PSWYQLI 146 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHH-HHHHHH----HH----------------h--hhHHHHH
Confidence 677788999999999999999999 789987666644321 111110 00 1 2234455
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 356 VLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 356 ~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
+.=++.|++.+........+++|+. |++.|+...+..+....+|..+++.++.
T Consensus 147 ~GR~l~G~g~G~~~~~~piy~sEia-p~~~RG~l~~~~~l~~~~Gi~~~~~~~~ 199 (513)
T KOG0254|consen 147 VGRILTGLGVGGASVLAPVYISEIA-PAHIRGTLVSLYQLFITIGILLGYCINY 199 (513)
T ss_pred HHHHHhccchhhhhhcchhhHhhcC-ChhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5567788888888888888999999 8889999999999999999999977764
No 241
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.06 E-value=0.006 Score=63.16 Aligned_cols=119 Identities=16% Similarity=0.107 Sum_probs=78.2
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCC
Q 011720 269 MFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSG 348 (479)
Q Consensus 269 ~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (479)
+++..+.++......++..++.+..|++.|| +|.|+....+.....+.+ +.. . +.. . + ..
T Consensus 66 ~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr--~G~R~v~~~~~ll~~i~~-~~~-~-~a~----~--------~-~~-- 125 (462)
T PRK15034 66 NFTTDQLFLLTALPSVSGALLRVPYSFMVPI--FGGRRWTVFSTAILIIPC-VWL-G-IAV----Q--------N-PN-- 125 (462)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChHHHHHHHHHHHHHH-HHH-H-HHH----c--------c-cC--
Confidence 3455567776666777777888888999999 677776555544322111 111 0 110 0 1 11
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 349 NDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
+++....++.++.|+..+.+ +.....+++.+ |+++|+++.|++....++|..+...+.|
T Consensus 126 ~s~~~lli~r~l~Gigg~~f-~~~~~~vs~wf-p~~~rG~A~Gi~~g~G~~G~~l~~~l~p 184 (462)
T PRK15034 126 TPFGIFIVIALLCGFAGANF-ASSMGNISFFF-PKAKQGSALGINGGLGNLGVSVMQLVAP 184 (462)
T ss_pred CCHHHHHHHHHHHHHHHHhH-HHHHHHHHHHC-CHhHhHHHHHHHHHHHhhHHHHHHHHHH
Confidence 35667788888888875544 44666788888 7888999999998777778876666554
No 242
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.02 E-value=0.025 Score=55.73 Aligned_cols=151 Identities=11% Similarity=-0.001 Sum_probs=92.9
Q ss_pred cccccch--hHHHHHHHHHHhhhhhhhhhhhcCCCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccc-hhHHHhhhh
Q 011720 20 LFRYNSP--LVQVSLIGLVCFCCPGMFNALSGMGGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFG-PRVTLAAGC 96 (479)
Q Consensus 20 ~~~~~~~--~~~~~~~~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~G-rk~~l~ig~ 96 (479)
.+.|++| |...+..++-+++...+..=+..+-.+...++...+...+.........++..+.+.+|.. +|+..+..+
T Consensus 202 ~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~ 281 (395)
T COG2807 202 RKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLAL 281 (395)
T ss_pred cccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 3456554 6667777777666543322111111111123444555677777878888999999999654 566666666
Q ss_pred HHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcC-CCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 97 STYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSY-PTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 97 ~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~-~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
+.+.+...++... +.... +.--++.|+|.|...+.+-..+.+- .++++-++..|+-+..-++=..+||++...+
T Consensus 282 ~~~l~G~~G~~~~---P~~~~-~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l 356 (395)
T COG2807 282 LLMLVGLVGLLLA---PGQLP-ILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFL 356 (395)
T ss_pred HHHHHHHHHHHHh---hhhHH-HHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence 6666644444332 11111 2224999999999888877777644 4577778888887765555556778776655
No 243
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.89 E-value=0.048 Score=54.76 Aligned_cols=110 Identities=17% Similarity=0.177 Sum_probs=80.2
Q ss_pred HHHHHHHHHHhhhhhhhhhh-ccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcC
Q 011720 65 NTALYTTFSVFGILGGGVYN-IFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSY 143 (479)
Q Consensus 65 ~~~~~~~~aig~l~~g~l~d-~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~ 143 (479)
++..-.+.-+|-...+.+.. +.+.|+.-.+|+.+-.+...........++.+.+..+-++.|+|.|.+.++.-+.+.+.
T Consensus 250 ta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~l 329 (403)
T PF03209_consen 250 TAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDL 329 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhC
Confidence 33333443344445555444 77777777777776555333333333456789999999999999999999888899999
Q ss_pred CCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 144 PTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 144 ~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
.++++.|..+|.|...+.+..-+|..++..+
T Consensus 330 t~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~ 360 (403)
T PF03209_consen 330 TSAGRAGLFMGAWGAAQAIARGLGTFLGGAL 360 (403)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887777777766654
No 244
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.86 E-value=0.19 Score=52.26 Aligned_cols=100 Identities=10% Similarity=0.010 Sum_probs=62.9
Q ss_pred hhhhhhhhhccchhHHHhhhhHHHHHHHHHHHh---hhc-c-C-----------------------chhhHHHHHHHHhh
Q 011720 76 GILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLY---YNH-H-H-----------------------DQTFAVVAGAVLGI 127 (479)
Q Consensus 76 ~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~---~~~-~-~-----------------------~~~~li~~R~i~G~ 127 (479)
.++-+.+++|++|++.+-+-...|..+.+.+.. ++. . + +.|..-+.-+...+
T Consensus 61 ~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~el 140 (472)
T TIGR00769 61 MLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL 140 (472)
T ss_pred HHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHH
Confidence 466789999999999887766655554333221 110 0 0 11221122222222
Q ss_pred hhhhhhh-hhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 128 GAGLLWA-GQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 128 g~g~~~~-~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
-.....+ .--.++.|+.+++|-.|..+++...-++|.++|+.+...+.
T Consensus 141 w~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 141 WGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222 33457889999999999999999999999999998766654
No 245
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.81 E-value=0.022 Score=61.71 Aligned_cols=140 Identities=11% Similarity=0.076 Sum_probs=88.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhc-cchhHHHhhhhHHHHHHHHHHHhhhccC-----chhhHHHHHHHHhhhhhhhhhhhhh
Q 011720 65 NTALYTTFSVFGILGGGVYNI-FGPRVTLAAGCSTYVLYAGSFLYYNHHH-----DQTFAVVAGAVLGIGAGLLWAGQGA 138 (479)
Q Consensus 65 ~~~~~~~~aig~l~~g~l~d~-~Grk~~l~ig~~~~~i~~~~~~~~~~~~-----~~~~li~~R~i~G~g~g~~~~~~~~ 138 (479)
...+.....+.++++|.++|+ +||++++.++.+++.+........+... .....+++=++..+|.|..-++.++
T Consensus 29 ~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsa 108 (654)
T TIGR00926 29 FHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSA 108 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchh
Confidence 344444456667889999987 8999999999998877432222211101 1233567777888899988888888
Q ss_pred hhhcCCCcc---chHhHHHHHHHHHHhhhhhhhHHHhhhhhccCCcc-cccc-hhHHHHHHHHHHHHHHHH
Q 011720 139 IMTSYPTAT---RKGTYISLFWSIFNMGGVVGGLIPFIMNYHRTDAE-SVND-KTYIAFMCFMSAGAALSL 204 (479)
Q Consensus 139 ~i~e~~~~~---~RG~~~g~~~~~~~~G~~iG~~i~~~i~~~~~~~~-~~~~-~~~~i~~~l~~l~~~l~~ 204 (479)
...|-.+++ +|-+.+.++....++|+.++..+...+.......+ ...| ..|.+..++++++.++..
T Consensus 109 f~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 109 FGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred hhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 888776644 46677888888889999888877665531100000 1223 345555555665554433
No 246
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=96.73 E-value=0.0095 Score=62.68 Aligned_cols=116 Identities=14% Similarity=0.056 Sum_probs=90.7
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccch--hHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhh
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGP--RVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLW 133 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Gr--k~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~ 133 (479)
.+.......+++.-....++.++.|.++|+... ++...++.++..+ .....+ .+++++.++..-++.|+..|...
T Consensus 330 ~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl--~~~~~p-~~~~~~~l~~~~~~fG~~~g~~~ 406 (509)
T KOG2504|consen 330 LSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL--ARLFLP-FATTYVGLIVFSILFGFCVGSFS 406 (509)
T ss_pred CChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH--HHHHHH-HhccHHHHHHHHHHHHHHHHHHH
Confidence 345556666777777778889999999999993 3333444333332 223333 56789999999999999999998
Q ss_pred hhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 134 AGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 134 ~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
...+.++.|+...++-..+.|+......++.++|+-+...+
T Consensus 407 ~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~ 447 (509)
T KOG2504|consen 407 SLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLL 447 (509)
T ss_pred HHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceee
Confidence 88888999999999999999999999999999999887733
No 247
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=96.71 E-value=0.003 Score=63.14 Aligned_cols=119 Identities=16% Similarity=0.034 Sum_probs=82.3
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCC
Q 011720 268 LMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTS 347 (479)
Q Consensus 268 ~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (479)
.+++..+.++......+...+..++.|++.|| +|-|+....+...+.+-+ ++.. +.. ..
T Consensus 44 ~~LS~~q~~ll~aiPil~GallRl~~g~l~dr--fGgR~~~~~s~~l~~IP~--~~~~-~a~---------------~~- 102 (417)
T COG2223 44 FGLSEGQKGLLVAIPILVGALLRLPYGFLTDR--FGGRKWTILSMLLLLIPC--LGLA-FAV---------------TY- 102 (417)
T ss_pred cCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc--cCchHHHHHHHHHHHHHH--HHHH-HHc---------------cC-
Confidence 34566678888777778888889999999999 555554444443322211 2211 110 12
Q ss_pred CCCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcccC
Q 011720 348 GNDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDTHK 411 (479)
Q Consensus 348 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 411 (479)
++++-..++.++.|+..+.+-. .....++.+ |+++++.+.|++- ..++|.++..++.|..
T Consensus 103 -~~~~~ll~~gll~G~~GasFav-~m~~~s~~f-P~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 103 -PSTWQLLVIGLLLGLAGASFAV-GMPNASFFF-PKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred -CchHHHHHHHHHHhcccceehc-ccccccccC-ChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 3445667778888888776655 334678888 8999999999999 8999999999998743
No 248
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.62 E-value=0.012 Score=60.70 Aligned_cols=150 Identities=13% Similarity=0.074 Sum_probs=91.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhH
Q 011720 275 RGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGP 354 (479)
Q Consensus 275 ~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (479)
-|+......++..++++++|.+..|.+-. |++++.|...+ ++..+++.. + .+. .+ ...+..
T Consensus 73 fG~viaa~slg~~i~~liF~~Ws~k~~~~-k~Pli~s~ii~-~~g~llY~~---l--~~~----------~~--~~~y~m 133 (488)
T KOG2325|consen 73 FGLVIAASSLGHAIFSLIFGIWSNKTGSV-KKPLIVSFLIA-IIGNLLYLA---L--AYV----------PN--GVKYLM 133 (488)
T ss_pred hhHHHHHHHHHHHhcchhhcccccccCCc-ccCHHHHHHHH-HHHHHHHHH---H--Hhc----------cc--chHHHH
Confidence 46777778999999999999999874322 55566665544 233444421 1 111 11 235677
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc----ccCc------c--hhHHHHH-H
Q 011720 355 FVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD----THKV------S--LLSQLII-N 421 (479)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~----~~~~------~--~~~~~~i-~ 421 (479)
.+..++.|++.+... ..-.|++... .+++|.|+++.....+.+|..++..++ +..- + .++.|.. .
T Consensus 134 L~~R~l~Gvg~~n~a-~lR~Y~a~~s-~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~ 211 (488)
T KOG2325|consen 134 LVARILTGVGVGNFA-VLRAYIADAS-TVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPA 211 (488)
T ss_pred HHHHHHcCcCcccHH-HHHHHHHhcc-CccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHH
Confidence 888888888876553 4778888766 467788888887776666666665544 3221 1 2233322 3
Q ss_pred HHHHHhhhhhhheeeeeEeccCCCC
Q 011720 422 WSLTTVSYPLLVVLVMLAVKDDDKS 446 (479)
Q Consensus 422 ~~~~~~~~~~~~~~v~~~~pet~~~ 446 (479)
|...+++ ++.+++++++++|-+..
T Consensus 212 w~m~i~~-i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 212 WLMAILW-IIYIVIILFFFKEVYRG 235 (488)
T ss_pred HHHHHHH-HHHHHHHHhheeecccC
Confidence 4333333 35666777888888633
No 249
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.57 E-value=0.0051 Score=62.18 Aligned_cols=135 Identities=14% Similarity=0.042 Sum_probs=83.2
Q ss_pred hhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhh-hccCchhhHHHHHHHHhhhhhh-hhhhhhhhhhcCCCccchHhH
Q 011720 75 FGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYY-NHHHDQTFAVVAGAVLGIGAGL-LWAGQGAIMTSYPTATRKGTY 152 (479)
Q Consensus 75 g~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~-~~~~~~~~li~~R~i~G~g~g~-~~~~~~~~i~e~~~~~~RG~~ 152 (479)
|-++...++|++|||+..+.|.+++.++......+ +.-.+..-+++.-.+..+..-+ ..++...+-+|++|.+-||..
T Consensus 364 Gyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~ 443 (538)
T KOG0252|consen 364 GYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTC 443 (538)
T ss_pred ceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhh
Confidence 45788899999999999999999888855443322 1011222233333333333322 233555677899999999999
Q ss_pred HHHHHHHHHhhhhhhhHHHhhhhhccCC-cccccchhHHHHHHHHHHHHHHHHhccCCcc
Q 011720 153 ISLFWSIFNMGGVVGGLIPFIMNYHRTD-AESVNDKTYIAFMCFMSAGAALSLAILPPSR 211 (479)
Q Consensus 153 ~g~~~~~~~~G~~iG~~i~~~i~~~~~~-~~~~~~~~~~i~~~l~~l~~~l~~~~~~~~~ 211 (479)
-|+..+.--+|.++|...-.....+... ....+ ..++++..++.++.++.++ .||++
T Consensus 444 hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~-~v~~i~~~~~~~gi~~T~l-~pEtk 501 (538)
T KOG0252|consen 444 HGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVR-NVFIILAGCMLLGILFTLL-IPETK 501 (538)
T ss_pred hhHHHHhccchHHHHHHHhhHhhhccCCccccch-HHHHHHHHHHHHhHheeEE-eeccc
Confidence 9999999899999987644333221110 11122 2456666666666555444 45554
No 250
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.22 E-value=0.16 Score=50.28 Aligned_cols=65 Identities=15% Similarity=0.175 Sum_probs=39.0
Q ss_pred chHHHHHHHHHHHhhhhh-hccccccccccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccce
Q 011720 241 NWKMLLLFPAAWASNFFY-SYQFNNVNGLMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTR 307 (479)
Q Consensus 241 ~~r~ll~~~~~~~~~~~~-s~~~~~~~~~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~ 307 (479)
+|+++....+....-|.. .|.+..|-.++++.++.+...........+.+.+.|.+.|| .|||+.
T Consensus 36 qr~yl~vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~--~Grk~~ 101 (354)
T PF05631_consen 36 QRKYLLVYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADR--YGRKKA 101 (354)
T ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCchHH
Confidence 344444444444333321 23323344466777777766666666666777778999999 789984
No 251
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=96.22 E-value=0.04 Score=55.09 Aligned_cols=115 Identities=11% Similarity=0.160 Sum_probs=80.4
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCC
Q 011720 271 NLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGND 350 (479)
Q Consensus 271 ~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (479)
+..+.++....+..+..++++..+++.|| +|+|+-.+.|+..+.+.+.+.| +.. . . ..
T Consensus 46 s~~~a~liqfaff~gYf~~~lpa~~~~kk--~gyk~gi~lgL~l~avg~~lF~----------pAa------~--~--~~ 103 (422)
T COG0738 46 TYFEASLIQFAFFGGYFIMSLPAGLLIKK--LGYKAGIVLGLLLYAVGAALFW----------PAA------S--S--KS 103 (422)
T ss_pred cHHHHHHHHHHHHHHHHHHhccHHHHHHH--hhhHHHHHHHHHHHHHHHHHHh----------hhh------h--h--hh
Confidence 34467888888999999999999999999 7898877767655432222221 111 0 1 22
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 351 FAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 351 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
+.......+..+.+-+..++..+.+++.+. +++..++-..+.+.++++|.+++..+.
T Consensus 104 y~~FL~~lFila~Gi~~LetaaNp~v~~lg-~~~~a~~rlnl~q~fn~lGa~~gp~~g 160 (422)
T COG0738 104 YGFFLVALFILASGIGLLETAANPYVTLLG-KPESAAFRLNLAQAFNGLGAILGPLLG 160 (422)
T ss_pred HHHHHHHHHHHHhhhHHHHhccchHHHHhC-CchhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 333333345667777788888888999998 666667778889999999999886654
No 252
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.12 E-value=0.038 Score=57.80 Aligned_cols=141 Identities=17% Similarity=0.189 Sum_probs=88.1
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchh
Q 011720 274 TRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAG 353 (479)
Q Consensus 274 ~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (479)
+-+.....+.++.+++-+..+.+.||....| +...+ ...|+....+.. +. .+++.
T Consensus 82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~------~l~~~----~~~w~~~~~~~~------------~~---~s~~~ 136 (495)
T KOG2533|consen 82 QLGVLDTVFYVGYIIGQFPSGLLGDRFPLSK------GLSVS----GILWGLFGFLTA------------AV---HSFPG 136 (495)
T ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHhCChHH------HHHHH----HHHHHHHHHHHH------------HH---hhhHH
Confidence 3355667788899999999999999953111 11111 112211010110 11 23455
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhccc--------CcchhHHHHHHHHHH
Q 011720 354 PFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDTH--------KVSLLSQLIINWSLT 425 (479)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~--------~~~~~~~~~i~~~~~ 425 (479)
..++-++.|++.++..|..-.+++..+ ..++|+.-++++...+++|+.++-.+.+. ...+|+..-+..+..
T Consensus 137 ~ialr~llGl~es~~wP~~~~~lg~wy-~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i 215 (495)
T KOG2533|consen 137 LIALRFLLGLFESGGWPGVVAILGNWY-GKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVI 215 (495)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHhhc-ChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHH
Confidence 677888899999999998888999999 67889999999998888888888776643 122444332222221
Q ss_pred HhhhhhhheeeeeEeccC
Q 011720 426 TVSYPLLVVLVMLAVKDD 443 (479)
Q Consensus 426 ~~~~~~~~~~v~~~~pet 443 (479)
. +...+++++++|+-
T Consensus 216 --~-~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 216 --T-LVLGIVVFFFLPDN 230 (495)
T ss_pred --H-HHHHheEEEEecCC
Confidence 1 23345566777754
No 253
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.46 E-value=0.018 Score=59.82 Aligned_cols=117 Identities=18% Similarity=0.182 Sum_probs=81.3
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCC
Q 011720 269 MFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSG 348 (479)
Q Consensus 269 ~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (479)
.++..+++++...+..|.+++.+..|++.|| +|-|+....+...-.+.+++. ++. .+
T Consensus 69 ~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k--~G~r~v~~~~~~~sa~~t~l~---------P~a-------a~----- 125 (466)
T KOG2532|consen 69 DWSSTEKGLIFSSFFWGYILGQIPGGYLADK--FGARRVFFISGLISALLTLLT---------PLA-------AS----- 125 (466)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCcHHHHHH--cCchHHHHHHHHHHHHHHHHH---------HHH-------HH-----
Confidence 3466678888888899999999999999999 555555444432221111111 111 01
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 349 NDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
.++...+++=++.|+..+...|.+..+.++-. |+.+|++..++......+|..++.-++.
T Consensus 126 ~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~-P~~Ers~~~ail~~g~q~g~v~~mp~sg 185 (466)
T KOG2532|consen 126 IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWA-PPNERSTFIAILTAGSQLGTIITMPVSG 185 (466)
T ss_pred hcchhhHHHHHHhHHHHhHHHhhhhceeeeEC-CHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 22335566678888888888887777777777 8999999999999888888888876654
No 254
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.39 E-value=0.14 Score=51.71 Aligned_cols=107 Identities=11% Similarity=0.079 Sum_probs=72.7
Q ss_pred HHHhhhhHHHHHHHHHHHhhhccCc------hhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCc---cchHhHHHHHHHHH
Q 011720 90 VTLAAGCSTYVLYAGSFLYYNHHHD------QTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTA---TRKGTYISLFWSIF 160 (479)
Q Consensus 90 ~~l~ig~~~~~i~~~~~~~~~~~~~------~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~---~~RG~~~g~~~~~~ 160 (479)
|++.+|.+++++....+...+...+ .+.++++-++.++|.|..-+...+..+|-.++ ++|.+.+.+|+...
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 5677788877774444222221222 36789999999999999999999999877654 46788889999999
Q ss_pred HhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHH
Q 011720 161 NMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAAL 202 (479)
Q Consensus 161 ~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l 202 (479)
++|..++..+...+.. +.+|. .|.+..+..+++.+.
T Consensus 82 n~G~~~~~~~~~~i~~------~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQ------NYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHCCCHHHH------CS-HHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhcc------ccchhhhhhHHHHHHHHHHHH
Confidence 9999999877766642 24443 355544545555444
No 255
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.31 E-value=0.6 Score=47.61 Aligned_cols=99 Identities=17% Similarity=0.167 Sum_probs=60.4
Q ss_pred hhhhhhhhhhc----cchhHHHhhhhHHHHHHHHHHHhhhccC--------c---------hhhHHHHHHHHhhhhhhhh
Q 011720 75 FGILGGGVYNI----FGPRVTLAAGCSTYVLYAGSFLYYNHHH--------D---------QTFAVVAGAVLGIGAGLLW 133 (479)
Q Consensus 75 g~l~~g~l~d~----~Grk~~l~ig~~~~~i~~~~~~~~~~~~--------~---------~~~li~~R~i~G~g~g~~~ 133 (479)
.+++.|..+|| +|||+.++......+.... ++.. .+. + ...++++=-+.=++.-...
T Consensus 83 vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l-~Lig-~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~q 160 (498)
T KOG0637|consen 83 VQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSL-FLIG-YAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQ 160 (498)
T ss_pred ecccccccccccccccccccchHHHhhHHHHHHH-hhhh-hHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhh
Confidence 34677777885 8998877666443222111 1111 011 1 1233444444444555555
Q ss_pred hhhhhhhhcCCCccchHh-HHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 134 AGQGAIMTSYPTATRKGT-YISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 134 ~~~~~~i~e~~~~~~RG~-~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
...-+++.|.+.+.+|-+ +.+++..+..+|..+|..++.+.+
T Consensus 161 gp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~ 203 (498)
T KOG0637|consen 161 GPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLG 203 (498)
T ss_pred hhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccC
Confidence 566678888876655555 999999999999999988876443
No 256
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.25 E-value=0.03 Score=57.41 Aligned_cols=105 Identities=16% Similarity=0.156 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHH
Q 011720 282 YWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSY 361 (479)
Q Consensus 282 ~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (479)
++...-+..+++|++.||. +|+|+....|.+.++ +...+.+ ++. . .+....++--.+.
T Consensus 70 y~slVY~t~i~GG~laDr~-LG~~~tI~lGail~~-iGh~~L~--------~~~----------~--~~~~gl~i~L~~I 127 (498)
T COG3104 70 YGSLVYLTPIIGGWLADRV-LGTRRTIVLGAILMA-IGHLVLA--------ISS----------V--SGPGGLYIGLALI 127 (498)
T ss_pred HHHHHHHHHHHHHHHHHHh-cchhHHHHHHHHHHH-HHHHHHh--------ccc----------c--ccccHHHHHHHHH
Confidence 4444445667899999997 699987777765542 2222211 110 0 1112233333445
Q ss_pred HhhHHHHHHHHHHHHHHhc--CCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 362 GLLDAMFQSMVYWVIGALA--DDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 362 g~~~~~~~~~~~~~~~~i~--~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
+++.+..-+....++++++ +|+| |-.+++++....++|+.++-.+.+
T Consensus 128 ~iG~Gl~K~NiS~llg~ly~~~Dpr-rD~gFt~fY~~iNiGsl~~p~i~~ 176 (498)
T COG3104 128 IVGTGLFKPNISSLLGELYPKDDPR-RDGGFTLFYMGINIGSLIAPIITG 176 (498)
T ss_pred HhccccccccHHHHHHHhcCCCCcc-cCCCccEEEEEeehHHHHHHHHHH
Confidence 5777777777778899988 6666 788999998888888888866654
No 257
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.03 E-value=5.2 Score=41.57 Aligned_cols=28 Identities=14% Similarity=0.197 Sum_probs=19.5
Q ss_pred HHHHHHhcCCchhhhHHHHHHHHHHHHHH
Q 011720 373 YWVIGALADDSETLSRYTGFYKGVQSAGA 401 (479)
Q Consensus 373 ~~~~~~i~~~~~~r~~~~~~~~~~~~~g~ 401 (479)
.+.-+.+. ||..-++++.+.+.+.++|.
T Consensus 427 ~AFharIS-DP~IGGTYMTLLNTvSNLGG 454 (544)
T PF13000_consen 427 MAFHARIS-DPAIGGTYMTLLNTVSNLGG 454 (544)
T ss_pred HHHHhhcc-CcccchHHHHHHHHHHhcCC
Confidence 34455666 88888888887777776554
No 258
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.27 E-value=0.21 Score=50.75 Aligned_cols=117 Identities=14% Similarity=0.106 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHhhhhcccc--ccCccceeeehhhhhHHHHHHHHHhHhhh---hcccCCCCCCCcccccCCCCCchhHHH
Q 011720 282 YWGAQMLGSVGIGYVMDFS--FQSLRTRGLVGIGIVALFGTAIWGGGLAS---QLNYSHDDPPKRLDFKTSGNDFAGPFV 356 (479)
Q Consensus 282 ~~i~~~i~~~~~g~l~Dr~--~~gRr~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (479)
.-+..++..++.|..+||. ++|||+..+.....+..+...+.. +.- ....++.. .+. ..++ +..
T Consensus 76 gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig--~aaDig~~lgd~~~---~~~-----~~ra-i~~ 144 (498)
T KOG0637|consen 76 GPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIG--YAADIGLLLGDNER---KPV-----KPRA-IVL 144 (498)
T ss_pred cccccceecccccccccccccccccccchHHHhhHHHHHHHhhhh--hHhhhhHHhcCCcc---ccc-----chHH-HHH
Confidence 3444455567789999984 689999887654443322222211 100 00011110 000 1111 111
Q ss_pred HHHHHHhhHH---HHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 357 LYFSYGLLDA---MFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 357 ~~~~~g~~~~---~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
..+-+.+-|- ..|..+-+++..+..+.+++-++.+.+.++.++|+++++...+
T Consensus 145 ~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 145 FILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 2222233333 4455577888888844444444999999999999999999885
No 259
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.03 E-value=8.4 Score=39.71 Aligned_cols=121 Identities=12% Similarity=0.044 Sum_probs=66.1
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCC
Q 011720 268 LMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTS 347 (479)
Q Consensus 268 ~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (479)
.+++....+..-....+..+.+.++..++.+| +|..+...++......+ ..... ..+ +... .
T Consensus 288 ~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r--iGlvr~G~~~l~~q~~~-L~~~v--~~~---~~~~---------~- 349 (432)
T PF06963_consen 288 QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR--IGLVRAGLWSLWWQWVC-LALCV--VSF---WAPG---------S- 349 (432)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcchhhHHHHHHHHHHH-HHHHH--HHH---hcCC---------C-
Confidence 34555555666556677778888888888887 67777777776544322 11111 111 1111 0
Q ss_pred CC-CchhHHHHHHHHH---hhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 348 GN-DFAGPFVLYFSYG---LLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 348 ~~-~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
+ .......++.... ++-=++.-...-++.|.. |.++|+.-.|+....|++.-.+.+...
T Consensus 350 -~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V-~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 350 -PFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENV-PESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred -CchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccC-CHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111111111 111111111222455666 778999999999999999888888765
No 260
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=93.30 E-value=3.2 Score=41.09 Aligned_cols=126 Identities=9% Similarity=-0.042 Sum_probs=77.2
Q ss_pred hhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHH
Q 011720 77 ILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLF 156 (479)
Q Consensus 77 l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~ 156 (479)
+..-.+.|..--|+++++-.+.+++-=..++ ..++.+.+=+.-++-|...+.- .+-.+|+-+..+|+++-|..|.-
T Consensus 60 vpvFlLTD~lrYKPvivlq~ls~v~~w~~lv---~g~sV~~mQvlE~FyG~~tAaE-IAYysYIYs~Vd~~~Yqrvt~y~ 135 (433)
T KOG3810|consen 60 VPVFLLTDYLRYKPVVVLQALSGVPVWIMLV---FGPSVKAMQVLEFFYGPATAAE-IAYYSYIYSKVDPEMYKRVTGYC 135 (433)
T ss_pred HHHHHHhhhhhcceeeeeeccchhHHHHHHH---hcCCchheeeehhhcChHHHHH-HhhhheeeeecCHHHHHHHHHHh
Confidence 3455678999999999888665443111111 2467777777777777665543 24456666777899999999998
Q ss_pred HHHHHhhhhhhhHHHhhhhhccCCcccccch-hHHHHHHHHHHHHHHHHhccCCc
Q 011720 157 WSIFNMGGVVGGLIPFIMNYHRTDAESVNDK-TYIAFMCFMSAGAALSLAILPPS 210 (479)
Q Consensus 157 ~~~~~~G~~iG~~i~~~i~~~~~~~~~~~~~-~~~i~~~l~~l~~~l~~~~~~~~ 210 (479)
-+..-.|-.+|...+-.+... ...+.. +-.+....+.++..+++++++|+
T Consensus 136 RaA~L~g~~~g~vlaQlLvs~----~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 136 RAAFLVGKFVGSVLAQLLVSL----ETLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHHHHHhHHHhHHHHHHhhh----cccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 888777777777666544211 112221 12233444556566666665544
No 261
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=92.37 E-value=1.1 Score=46.49 Aligned_cols=106 Identities=14% Similarity=0.170 Sum_probs=80.0
Q ss_pred HHHHHHHHHHhhhhh-hhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcC
Q 011720 65 NTALYTTFSVFGILG-GGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSY 143 (479)
Q Consensus 65 ~~~~~~~~aig~l~~-g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~ 143 (479)
.+.......++.++. +.+...+|-|+.+.+|...-.+ .....+.+++.|+++.+..+.++.... .++..+.++-+
T Consensus 283 ~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~---~~~~~af~~~~w~~~~~~v~~~~~~~~-~pa~~s~~s~~ 358 (463)
T KOG2816|consen 283 LSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFL---QLLLFAFATETWMMFAAGVVVALAGIV-FPAIRAFASIL 358 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHH---HHHHHHHhccchhhhHHHHHHHhhcch-hHHHHhHHHhh
Confidence 344444556666554 4788889999988888775544 333334578899999999997776654 46777888899
Q ss_pred CCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 144 PTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 144 ~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
.+++++|+..++......+...+++.+-..+
T Consensus 359 v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 359 VSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred cccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 9999999999999999999999988775544
No 262
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=91.78 E-value=3 Score=42.41 Aligned_cols=63 Identities=10% Similarity=0.008 Sum_probs=56.5
Q ss_pred cCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 112 HHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 112 ~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
-++.|.+++.-+..|+-+|..++.....+.|-.++++|...+|.-...-++|..++++++..+
T Consensus 332 ipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 332 IPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 467899889999999999999988888888778999999999999999999999999987755
No 263
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=91.64 E-value=2.6 Score=44.11 Aligned_cols=95 Identities=8% Similarity=0.002 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHH
Q 011720 277 LNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFV 356 (479)
Q Consensus 277 l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (479)
......-.+.++.-++.+++++| +|+-+.+..++++.. .-++. +. +- .+.|.+.-
T Consensus 410 v~~a~~~~gEI~~~ffs~klI~k--iGHv~v~~lgLa~~~-~Rf~~----~S----~L--------------~n~W~vLP 464 (618)
T KOG3762|consen 410 VVSALCHAGEILFYFFSFKLIEK--IGHVNVMYLGLACNV-GRFLY----YS----YL--------------QNPWMVLP 464 (618)
T ss_pred ehhhhhccchHHHHHHHHHHHHH--hcccceeeehhhHHH-HHHHH----HH----Hh--------------cCchheee
Confidence 34445566777777888899988 789888777765432 22222 11 01 12345556
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHH
Q 011720 357 LYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQ 397 (479)
Q Consensus 357 ~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~ 397 (479)
+-++.|...+.....+-+|++... ||+.|+.+-++.+...
T Consensus 465 ieilqgit~aliWaa~~sY~s~va-Pp~l~at~Q~l~~g~f 504 (618)
T KOG3762|consen 465 IEILQGITHALIWAAIISYASHVA-PPGLRATAQGLLQGIF 504 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-CCcchHHHHHHHHHHh
Confidence 667777777666665667788888 8899888877776543
No 264
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=91.64 E-value=1.4 Score=45.48 Aligned_cols=103 Identities=17% Similarity=0.052 Sum_probs=69.3
Q ss_pred HhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhh----hc---cCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCc
Q 011720 74 VFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYY----NH---HHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTA 146 (479)
Q Consensus 74 ig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~----~~---~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~ 146 (479)
+|..+......+..-|+.+..+.++.++.....+.. |. -++.+..+.--++..+-..+.+......++|++|+
T Consensus 270 ~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~ 349 (433)
T PF03092_consen 270 LGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPK 349 (433)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 333333344444455677777776555422111100 10 12335556677777777888777777889999999
Q ss_pred cchHhHHHHHHHHHHhhhhhhhHHHhhhhh
Q 011720 147 TRKGTYISLFWSIFNMGGVVGGLIPFIMNY 176 (479)
Q Consensus 147 ~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~ 176 (479)
...|...++..+..++|..++..++..+..
T Consensus 350 G~Egt~yall~s~~Nlg~~~s~~lg~~l~~ 379 (433)
T PF03092_consen 350 GSEGTVYALLASFSNLGSSVSSTLGAFLME 379 (433)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988887754
No 265
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.36 E-value=21 Score=37.48 Aligned_cols=154 Identities=15% Similarity=0.106 Sum_probs=79.3
Q ss_pred ccchhHHHHHHHHHHhhhhhhhhhhhcCCCC---CCCChhhhhhHHHHHHH-HHHHhhhhhhhhhhccchhHHHhhhhHH
Q 011720 23 YNSPLVQVSLIGLVCFCCPGMFNALSGMGGG---GQLDPTAANNANTALYT-TFSVFGILGGGVYNIFGPRVTLAAGCST 98 (479)
Q Consensus 23 ~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~-~~aig~l~~g~l~d~~Grk~~l~ig~~~ 98 (479)
.+..+.+.+.+++..||....|+.+-.+--. ....+......=....+ ...+.-.+-..++|+++|++.+-+....
T Consensus 19 ~~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~ 98 (491)
T PF03219_consen 19 HRSELKKFLPLALMFFFILFNYTILRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIP 98 (491)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 4556667788888878876556643222111 00112211111110011 1111224567899999999887766554
Q ss_pred HHHHHHHH---Hhhhc---cCch-hh---HHHHHHHHh------------------hhhhhhhh-hhhhhhhcCCCccch
Q 011720 99 YVLYAGSF---LYYNH---HHDQ-TF---AVVAGAVLG------------------IGAGLLWA-GQGAIMTSYPTATRK 149 (479)
Q Consensus 99 ~~i~~~~~---~~~~~---~~~~-~~---li~~R~i~G------------------~g~g~~~~-~~~~~i~e~~~~~~R 149 (479)
|..+-+.+ ++++. .++. +. ....+.+.| +-.+...+ .--.+..|..+.+|-
T Consensus 99 F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eA 178 (491)
T PF03219_consen 99 FLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEA 178 (491)
T ss_pred HHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 44433332 22221 1111 10 011111222 11111111 123466788899999
Q ss_pred HhHHHHHHHHHHhhhhhhhHHHhhhhh
Q 011720 150 GTYISLFWSIFNMGGVVGGLIPFIMNY 176 (479)
Q Consensus 150 G~~~g~~~~~~~~G~~iG~~i~~~i~~ 176 (479)
.|..+++...-++|.++++-+......
T Consensus 179 KRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 179 KRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998877665544
No 266
>PF12832 MFS_1_like: MFS_1 like family
Probab=90.67 E-value=1.2 Score=33.79 Aligned_cols=43 Identities=19% Similarity=0.093 Sum_probs=35.6
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHH
Q 011720 56 LDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCST 98 (479)
Q Consensus 56 ~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~ 98 (479)
.++...+...++......++++++|.++||+||++.+.....+
T Consensus 32 l~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 32 LSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 4566777778888888889999999999999998888776654
No 267
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=89.95 E-value=26 Score=36.23 Aligned_cols=55 Identities=13% Similarity=0.094 Sum_probs=39.4
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhh
Q 011720 352 AGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQV 407 (479)
Q Consensus 352 ~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~ 407 (479)
+..+++.+++|+.++-..+....+.++.. ++++|..+..+..+...+|.+.+..+
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v-~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQV-DPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556677888888888887777777777 66888888777777666666665444
No 268
>PF12832 MFS_1_like: MFS_1 like family
Probab=89.70 E-value=0.52 Score=35.82 Aligned_cols=39 Identities=15% Similarity=0.029 Sum_probs=33.0
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCcccee
Q 011720 268 LMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRG 308 (479)
Q Consensus 268 ~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~ 308 (479)
.+++..+.++......+..+++.++.|.+.|| .+|++..
T Consensus 30 ~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk--~~~~~~~ 68 (77)
T PF12832_consen 30 LGLSPSQIGILSAIRPLIRFLAPPLWGFLADK--FGKRKVI 68 (77)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCccHHH
Confidence 56788889999888999999999999999999 5566643
No 269
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.55 E-value=4.7 Score=41.75 Aligned_cols=93 Identities=17% Similarity=0.108 Sum_probs=63.6
Q ss_pred hhhhhhhh---hhccchhHHHhhhhHHHHHHHHHHHhh--hcc-------------CchhhHHHHHHHHhhhhhhhhhhh
Q 011720 75 FGILGGGV---YNIFGPRVTLAAGCSTYVLYAGSFLYY--NHH-------------HDQTFAVVAGAVLGIGAGLLWAGQ 136 (479)
Q Consensus 75 g~l~~g~l---~d~~Grk~~l~ig~~~~~i~~~~~~~~--~~~-------------~~~~~li~~R~i~G~g~g~~~~~~ 136 (479)
++++.+.+ .+++||++.+.++.++..++....... .-+ ++...-.+..++.|++-+...+..
T Consensus 295 ~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~ 374 (461)
T KOG3098|consen 295 GGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQR 374 (461)
T ss_pred HHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHH
Confidence 34444444 567899999999988877643332211 011 123456777899999999988888
Q ss_pred hhhhhcCCCccchHhHHHHHHHHHHhhhhhhh
Q 011720 137 GAIMTSYPTATRKGTYISLFWSIFNMGGVVGG 168 (479)
Q Consensus 137 ~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~ 168 (479)
..++.+.. |++|..+.+++-.-..++..++.
T Consensus 375 ~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 375 YVIIALLY-PDDRAQAFSLFKFYQSVASCVAF 405 (461)
T ss_pred HHHHHHHh-cCchHHHHHHHHHHHHHHHHHHh
Confidence 88888877 78888888887766666555543
No 270
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=89.30 E-value=3.2 Score=39.35 Aligned_cols=36 Identities=14% Similarity=0.119 Sum_probs=21.9
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCchh
Q 011720 350 DFAGPFVLYFSYGLLDAMFQSMVYWVIGALA-DDSET 385 (479)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~-~~~~~ 385 (479)
+.+...+..++.|++.=+.|+++-.++.|+- .+|++
T Consensus 203 ~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEyK~~~pk~ 239 (267)
T PF07672_consen 203 GFAFFYIFGFLAGFFLWGIQGVILNLPHEYKGYNPKK 239 (267)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHhcChhhhcCCCcce
Confidence 3444555556777777777776665566665 34443
No 271
>PRK03612 spermidine synthase; Provisional
Probab=87.19 E-value=9.5 Score=40.44 Aligned_cols=118 Identities=12% Similarity=0.035 Sum_probs=61.4
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHH-HHHHHHHHH--hhhccCch-hhHHHHHHHHhhhhhhhh
Q 011720 58 PTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCST-YVLYAGSFL--YYNHHHDQ-TFAVVAGAVLGIGAGLLW 133 (479)
Q Consensus 58 ~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~-~~i~~~~~~--~~~~~~~~-~~li~~R~i~G~g~g~~~ 133 (479)
....+..++++.+++++|+.+++.+.++.-|+....-..+. +.......+ ........ ..++..-++.|+-.|+..
T Consensus 49 ~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 128 (521)
T PRK03612 49 VTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEI 128 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456678888899999999888876544444332211110 000000000 00000011 112333445555555544
Q ss_pred hhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhh
Q 011720 134 AGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNY 176 (479)
Q Consensus 134 ~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~ 176 (479)
+....+..+. ..++-|+..|-.+...++|.++|.++...+..
T Consensus 129 Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 129 PLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 4433333332 12234677888888899999999988776543
No 272
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=86.70 E-value=7.9 Score=40.03 Aligned_cols=63 Identities=11% Similarity=0.208 Sum_probs=53.7
Q ss_pred CchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 113 HDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 113 ~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
+|.+..++.-++.|+..|-..+....+..+..++++|..+-.+...+..+|..+|..+++.+.
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~~ 432 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLFV 432 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777888999999999988888888888888999999999988889999999998877553
No 273
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=85.85 E-value=4.1 Score=41.70 Aligned_cols=107 Identities=13% Similarity=0.027 Sum_probs=65.4
Q ss_pred HHHHHHHHHhhhhhhhhhhccch-hHHHhhhhHHHHHHHHHHHhh-hccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcC
Q 011720 66 TALYTTFSVFGILGGGVYNIFGP-RVTLAAGCSTYVLYAGSFLYY-NHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSY 143 (479)
Q Consensus 66 ~~~~~~~aig~l~~g~l~d~~Gr-k~~l~ig~~~~~i~~~~~~~~-~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~ 143 (479)
.+......+++.++|.+.||... |.++.+......+++..+.+. ....+.+.++..-.+.|+......+...-.-.|.
T Consensus 308 ~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~ 387 (480)
T KOG2563|consen 308 ALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVET 387 (480)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeee
Confidence 34455567888999999999885 666666655544432222221 1123345566666667777666666555566677
Q ss_pred CCccchHhHHHHHHHHHHhhhhhhhHHHhhhh
Q 011720 144 PTATRKGTYISLFWSIFNMGGVVGGLIPFIMN 175 (479)
Q Consensus 144 ~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~ 175 (479)
.-|..-|.-.|+.. ..|++.|-.+.....
T Consensus 388 TyPv~E~tSsGll~---~~gq~f~~~~~~~~~ 416 (480)
T KOG2563|consen 388 TYPVAEGTSSGLLN---LSGQIFGVILVFIMG 416 (480)
T ss_pred ccccCCcccceeEE---eehhHHHHHHHHHHH
Confidence 66666666666653 456667666655544
No 274
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=83.21 E-value=9.7 Score=33.27 Aligned_cols=96 Identities=13% Similarity=0.107 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHH
Q 011720 282 YWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSY 361 (479)
Q Consensus 282 ~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (479)
......+++++.+.+.++ +|.|+.+++|..+ +.++..... + +.....+....+.
T Consensus 46 ~Y~~~~~s~l~~P~iv~~--lg~K~sm~lg~~~-----y~~y~~~~~----~---------------~~~~~l~~~s~l~ 99 (156)
T PF05978_consen 46 LYGSFAISCLFAPSIVNK--LGPKWSMILGSLG-----YAIYIASFF----Y---------------PNSYTLYPASALL 99 (156)
T ss_pred HHHHHHHHHHhHHHHHHH--HhhHHHHHHHHHH-----HHHHHHHHH----h---------------hhHHHHHHHHHHH
Confidence 344445555666666777 6788765555432 223321110 1 2234455666677
Q ss_pred HhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHH
Q 011720 362 GLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVA 404 (479)
Q Consensus 362 g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~ 404 (479)
|++.+...+..-.++.+.. +.+.+++..+++-.+.+.+..++
T Consensus 100 G~~~a~lW~aqg~ylt~~s-~~~~~~~~~~ifw~i~~~s~i~G 141 (156)
T PF05978_consen 100 GFGAALLWTAQGTYLTSYS-TEETIGRNTGIFWAIFQSSLIFG 141 (156)
T ss_pred hhhhHHhhHhhhHHHHHcC-CHHHHhhHHHHHHHHHHHHHHHH
Confidence 7777766665556777777 66777888777666655444444
No 275
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=78.77 E-value=89 Score=32.66 Aligned_cols=38 Identities=13% Similarity=0.124 Sum_probs=32.0
Q ss_pred hhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhh
Q 011720 139 IMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNY 176 (479)
Q Consensus 139 ~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~ 176 (479)
...|..+.+|-.|..+++....+++..+++.+...++.
T Consensus 172 faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 172 FANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44577788999999999999999999999888777764
No 276
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=78.57 E-value=0.57 Score=49.84 Aligned_cols=135 Identities=13% Similarity=0.072 Sum_probs=2.6
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccC--CCCC-------CCc
Q 011720 271 NLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYS--HDDP-------PKR 341 (479)
Q Consensus 271 ~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~ 341 (479)
+..+.|++...+-++.++..++..++.+| +.|++++..-..++.+..+++..=-....+|. ..+. ...
T Consensus 36 ~S~~~G~i~s~~di~~~~~~~~vsy~g~~---~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~ 112 (539)
T PF03137_consen 36 SSSQSGLISSSYDIGSLVVVLFVSYFGGR---GHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSN 112 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccc
Confidence 44567888889999999999999998876 46666553211111111111110000011111 0000 000
Q ss_pred c----------------ccc-CCC-C-CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHH
Q 011720 342 L----------------DFK-TSG-N-DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAA 402 (479)
Q Consensus 342 ~----------------~~~-~~~-~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~ 402 (479)
. +.. .++ . -+...++--++.|++.....+.-.+|+.+-. ++++...+.|+......+|-+
T Consensus 113 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv-~~~~splYiGi~~~~~~lGPa 191 (539)
T PF03137_consen 113 LCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNV-SKKNSPLYIGILYAMSILGPA 191 (539)
T ss_dssp ---------------------------------------SSS--------------------------------------
T ss_pred cccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccc-ccccCccchhhhhHHhhccHH
Confidence 0 000 000 1 1223344447788888888888888999988 677788889999988888888
Q ss_pred HHhhhcc
Q 011720 403 VAWQVDT 409 (479)
Q Consensus 403 i~~~~~~ 409 (479)
+++.++.
T Consensus 192 ~Gf~lg~ 198 (539)
T PF03137_consen 192 LGFLLGS 198 (539)
T ss_dssp -------
T ss_pred HHHHHHH
Confidence 8887763
No 277
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=77.51 E-value=28 Score=35.95 Aligned_cols=98 Identities=11% Similarity=-0.081 Sum_probs=60.1
Q ss_pred HhhhhhhhhhhccchhHHHhhhhHHHH----HHHHHHHhhhccC----chhhHHHHHHHHhhhhhhhhhhhhhhhhcCCC
Q 011720 74 VFGILGGGVYNIFGPRVTLAAGCSTYV----LYAGSFLYYNHHH----DQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPT 145 (479)
Q Consensus 74 ig~l~~g~l~d~~Grk~~l~ig~~~~~----i~~~~~~~~~~~~----~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~ 145 (479)
.+-+..+++.+|+|..++=.++...-. +...+++... ++ +...++.+=++.-+|.=.+=-+...++.|..|
T Consensus 308 ~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~-~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~ 386 (432)
T PF06963_consen 308 LGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPG-SPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVP 386 (432)
T ss_pred HHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCC-CCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCC
Confidence 345788899999998777666654222 2112222221 11 22334444444444432232355567889999
Q ss_pred ccchHhHHHHHHHHHHhhhhhhhHHHh
Q 011720 146 ATRKGTYISLFWSIFNMGGVVGGLIPF 172 (479)
Q Consensus 146 ~~~RG~~~g~~~~~~~~G~~iG~~i~~ 172 (479)
+++||...|...+..++--++-..+..
T Consensus 387 ~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 387 ESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998887777665543
No 278
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=70.51 E-value=13 Score=28.78 Aligned_cols=52 Identities=29% Similarity=0.261 Sum_probs=42.0
Q ss_pred CCCCCCCChhhhhhHHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHH
Q 011720 50 MGGGGQLDPTAANNANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVL 101 (479)
Q Consensus 50 l~~~~~~~~~~~~~~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i 101 (479)
+..++..+...++...+..|.++-+|++....+.++..+++.+..+.+.-.+
T Consensus 18 M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~ 69 (85)
T PF06779_consen 18 MQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVL 69 (85)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 3444556777888888999999999999999999998888888888776555
No 279
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=70.42 E-value=23 Score=38.74 Aligned_cols=108 Identities=12% Similarity=-0.063 Sum_probs=58.7
Q ss_pred HHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhHHHHHHHHHhhH
Q 011720 286 QMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGPFVLYFSYGLLD 365 (479)
Q Consensus 286 ~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 365 (479)
.-+..+++|.+.|++ +||++...++.+... ++..+. .+.. .+ +..+ . ......+....+...+.
T Consensus 36 ~yl~pilGg~iAD~~-lG~~~tIl~~~ii~~-lG~~ll----ai~a-~~-----~~~~--~--~~~~~~l~gLaLia~G~ 99 (654)
T TIGR00926 36 CYLTPLIGAIIADGW-LGKFKTILYLSIVYV-VGHALL----SFGA-IP-----SSGH--P--LHDLLDLLGLALIALGT 99 (654)
T ss_pred HHHHHHHHHHHHHHH-hhhHHHHHHHHHHHH-HHHHHH----Hhcc-Cc-----cccc--c--hHHHHHHHHHHHHHhhc
Confidence 344556688999996 788886665543321 221111 1100 11 0001 0 11112233334455556
Q ss_pred HHHHHHHHHHHHHhcCC--chhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 366 AMFQSMVYWVIGALADD--SETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 366 ~~~~~~~~~~~~~i~~~--~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
++..+..-+..++.+++ .+.|.+.+.++.+..++|+.++..+.+
T Consensus 100 GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~ 145 (654)
T TIGR00926 100 GGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITP 145 (654)
T ss_pred cccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666566677777732 234777888888888888888766654
No 280
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=69.68 E-value=16 Score=37.18 Aligned_cols=62 Identities=15% Similarity=0.173 Sum_probs=49.5
Q ss_pred cCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhh
Q 011720 112 HHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFI 173 (479)
Q Consensus 112 ~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~ 173 (479)
-.+.+.++..-.+.|+..|-..+....+.-+-.|++++-.+-.+...+...|...|..+++.
T Consensus 340 ~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 340 FESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred ecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 35678888999999999999877777777777788888877777777778888888877663
No 281
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=68.18 E-value=43 Score=35.07 Aligned_cols=25 Identities=16% Similarity=0.133 Sum_probs=13.3
Q ss_pred CchhhhHHHHHHHHHHHHHHHHHhh
Q 011720 382 DSETLSRYTGFYKGVQSAGAAVAWQ 406 (479)
Q Consensus 382 ~~~~r~~~~~~~~~~~~~g~~i~~~ 406 (479)
+++.++.|..-...-|++|.++++.
T Consensus 148 s~~n~~~ASTcqtvG~~~Gyfls~t 172 (544)
T PF13000_consen 148 SPENVGYASTCQTVGQTAGYFLSFT 172 (544)
T ss_pred ChhhcchHHHHHHhHhhhhHHHHHH
Confidence 3566666655444445555555543
No 282
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=67.19 E-value=1.5e+02 Score=30.21 Aligned_cols=51 Identities=12% Similarity=0.037 Sum_probs=29.4
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHH
Q 011720 353 GPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVA 404 (479)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~ 404 (479)
...+.....|+.++-.......+.++.. +++++..+..+..+....|.+.+
T Consensus 345 ~~~~l~~~lglsnGYltsl~m~~aPk~v-~~~e~e~aG~~m~~fl~~Gl~~G 395 (406)
T KOG1479|consen 345 WFIFLMSLLGLSNGYLTSLIMMYAPKQV-KPSEKEAAGNLMVFFLVGGLALG 395 (406)
T ss_pred HHHHHHHHHHhccchHhhheehhcCCCC-ChHHHHHHHHHHHHHHHHHHHHh
Confidence 3455566777777766665556666766 44555455445554444444444
No 283
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=66.53 E-value=60 Score=29.98 Aligned_cols=107 Identities=19% Similarity=0.156 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhhhhHHHHHHHHHhHhhhhcccCCCCCCCcccccCCCCCchhH
Q 011720 275 RGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIGIVALFGTAIWGGGLASQLNYSHDDPPKRLDFKTSGNDFAGP 354 (479)
Q Consensus 275 ~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (479)
.++....+.+...++.++.|.+.|| .|||+....+.... ...... ..+ .. . . .....
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~--~g~~~~~~~~~~~~-~~~~~~----~~~---~~--------~--~---~~~~~ 97 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDR--YGRRKVLIIGLLLF-LLGTLL----LAL---AP--------N--V---GLALL 97 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhcccc--ccchHHHHHHHHHH-HHHHHH----HHh---Cc--------c--c---hHHHH
Confidence 4555666777777887899999999 48885444443221 111011 100 00 0 0 12233
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcCCc-hhhhHHHHHHHH-HHHHHHHHHh
Q 011720 355 FVLYFSYGLLDAMFQSMVYWVIGALADDS-ETLSRYTGFYKG-VQSAGAAVAW 405 (479)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~~r~~~~~~~~~-~~~~g~~i~~ 405 (479)
....+..|+..+...+....++.+.. +. ++|....+.... ....+..++.
T Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T COG0477 98 LILRLLQGLGGGGLLPVASALLSEWF-PEATERGLAVGLVTLGAGALGLALGP 149 (338)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444467777777777778888888 43 356676666665 3444444443
No 284
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=64.03 E-value=67 Score=34.54 Aligned_cols=108 Identities=17% Similarity=0.126 Sum_probs=67.5
Q ss_pred HHHHHHHHhhhhhhhhhhc-cchhHHHhhhhHHHHHHHHHHHhhhcc-----------------C--c---hhhHHHHHH
Q 011720 67 ALYTTFSVFGILGGGVYNI-FGPRVTLAAGCSTYVLYAGSFLYYNHH-----------------H--D---QTFAVVAGA 123 (479)
Q Consensus 67 ~~~~~~aig~l~~g~l~d~-~Grk~~l~ig~~~~~i~~~~~~~~~~~-----------------~--~---~~~li~~R~ 123 (479)
.+.+.....+++++.++|. +||=+++.++++++.+.....-..+.. + + ...++.+.-
T Consensus 81 ~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~ 160 (571)
T KOG1237|consen 81 AFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALY 160 (571)
T ss_pred HHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHH
Confidence 3444455567889999997 588899999999888753322111100 0 1 125677777
Q ss_pred HHhhhhhhhhhhhhhhhhcCCC----ccchH--hHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 124 VLGIGAGLLWAGQGAIMTSYPT----ATRKG--TYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 124 i~G~g~g~~~~~~~~~i~e~~~----~~~RG--~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
+..+|.|..-+.....-+|=.+ ++.+. +.+.++....++|..++..+.-.+
T Consensus 161 lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyi 217 (571)
T KOG1237|consen 161 LIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYI 217 (571)
T ss_pred HheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhh
Confidence 7777888765555555555444 33333 677788777788877776554433
No 285
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=58.87 E-value=69 Score=30.53 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=49.4
Q ss_pred HHHHHHHHhhhhhhhhhhccchhHHHhhhhH--HHHHHHHHHHhhh-cc----CchhhHHHHHHHHhhhhhhhhhhhhhh
Q 011720 67 ALYTTFSVFGILGGGVYNIFGPRVTLAAGCS--TYVLYAGSFLYYN-HH----HDQTFAVVAGAVLGIGAGLLWAGQGAI 139 (479)
Q Consensus 67 ~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~--~~~i~~~~~~~~~-~~----~~~~~li~~R~i~G~g~g~~~~~~~~~ 139 (479)
++..++.+|.+..|+.+..-=+|+.++...+ ....+..+.++.. .. .+.+.+++..++.|+. .|..|+.+
T Consensus 149 ~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f---~WgiQ~Vi 225 (267)
T PF07672_consen 149 LFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFF---LWGIQGVI 225 (267)
T ss_pred HHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHH---HHhhhHHH
Confidence 3445556677777776655433433333221 1111112333221 11 1356678888877654 48888887
Q ss_pred hh---cC--CCccchHhHHHHHHHHHHhh
Q 011720 140 MT---SY--PTATRKGTYISLFWSIFNMG 163 (479)
Q Consensus 140 i~---e~--~~~~~RG~~~g~~~~~~~~G 163 (479)
+. |+ ++|++-|..+|+-|.+-.+.
T Consensus 226 L~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 226 LNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred hcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 64 33 35777777777766443333
No 286
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=57.43 E-value=1.6e+02 Score=30.14 Aligned_cols=58 Identities=19% Similarity=0.255 Sum_probs=39.4
Q ss_pred CchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 350 DFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
+....-+.-+++|...++-.. -++|+=... |+++=-++.+..|...-+|.+++..++.
T Consensus 93 sv~~mq~~q~~yg~~~a~eva-y~sYiys~v-~~~~yq~vts~~raa~l~g~~~s~~lgQ 150 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAAEVA-YYSYIYSVV-DKEHYQKVTSYTRAATLVGRFISSLLGQ 150 (412)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-HHHHheeec-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566777888888876433 445544444 5666668888888888888888777664
No 287
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=56.61 E-value=43 Score=29.04 Aligned_cols=83 Identities=14% Similarity=0.061 Sum_probs=49.1
Q ss_pred hhhhccchhHHHhhhh---HHHHHHHHHHHhhhc----cCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHH
Q 011720 81 GVYNIFGPRVTLAAGC---STYVLYAGSFLYYNH----HHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYI 153 (479)
Q Consensus 81 ~l~d~~Grk~~l~ig~---~~~~i~~~~~~~~~~----~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~ 153 (479)
.++||.-||..+..|. +.+..+.+.++.... .++...++..-.+-|+|.-. ..+.+++.-+++++.|...
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllG---isYGilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLG---ISYGILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHh---hhhhhcccccCCCCCCCcc
Confidence 4678888888877773 333333334333211 12333444444444544433 3455666667999999999
Q ss_pred HHHHHHHHhhhhh
Q 011720 154 SLFWSIFNMGGVV 166 (479)
Q Consensus 154 g~~~~~~~~G~~i 166 (479)
|+-..-.+++-+.
T Consensus 133 G~~e~~~N~~r~~ 145 (153)
T PF11947_consen 133 GWEEFKRNWGRMW 145 (153)
T ss_pred cHHHHHHhHHHHH
Confidence 9988777776554
No 288
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=55.70 E-value=4.2 Score=39.88 Aligned_cols=62 Identities=11% Similarity=0.217 Sum_probs=3.3
Q ss_pred CchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 113 HDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 113 ~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
+|.+..++.-++.|+..|-..+....+..+..++++|..+-.+......+|..+|..+++.+
T Consensus 246 ~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~~ 307 (309)
T PF01733_consen 246 NSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFLL 307 (309)
T ss_dssp ---------------------HHHH-------------------------------------
T ss_pred cchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45667788888999999998888888888888899999888888888888999888877643
No 289
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=51.50 E-value=21 Score=27.66 Aligned_cols=44 Identities=11% Similarity=-0.001 Sum_probs=32.2
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHhhhhccccccCccceeeehhh
Q 011720 268 LMFNLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFQSLRTRGLVGIG 313 (479)
Q Consensus 268 ~~f~~~~~~l~~~~~~i~~~i~~~~~g~l~Dr~~~gRr~~~~~g~~ 313 (479)
..++..+.++....+.+|.++|++...++.++ ..+|+....+..
T Consensus 22 ~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~--~~~~~~~~~~l~ 65 (85)
T PF06779_consen 22 GGLSLSQAGWLASANYLGYLVGALLASRLPRH--SRPRRLLRAGLL 65 (85)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHH
Confidence 34677788888889999999999999988776 334444454543
No 290
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=44.24 E-value=3.1e+02 Score=27.19 Aligned_cols=59 Identities=15% Similarity=0.013 Sum_probs=41.5
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 349 NDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
++++.++++-++=|+..++.....+--+.+-. +++.|.-+++....-.+.|..++-+++
T Consensus 340 psi~ivf~lI~~EGLlGGasYVNTf~~i~~e~-~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 340 PSIWIVFALILFEGLLGGASYVNTFHNIHKET-EPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred cHHHHHHHHHHHHhhcCchHHHHHHHHHhhcC-CchHHHHhHhhheecchhhHHHHHHHh
Confidence 56777777777777766665554554455555 678888998888777787777776654
No 291
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=34.02 E-value=1.4e+02 Score=32.03 Aligned_cols=63 Identities=13% Similarity=0.209 Sum_probs=52.4
Q ss_pred chhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhhhh
Q 011720 114 DQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIMNY 176 (479)
Q Consensus 114 ~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i~~ 176 (479)
|...++.--++.|++..+..++.--+--+-+|++-|...++++.+...+|..++..+......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~ 519 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQF 519 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788899999999999887776666666899999999999999999999998887765543
No 292
>COG2119 Predicted membrane protein [Function unknown]
Probab=32.75 E-value=2.2e+02 Score=25.59 Aligned_cols=38 Identities=13% Similarity=0.125 Sum_probs=29.6
Q ss_pred HHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHH
Q 011720 70 TTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFL 107 (479)
Q Consensus 70 ~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~ 107 (479)
....++-+.+..+++|+-.|..-.++.++|.++..-.+
T Consensus 145 l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal~~~ 182 (190)
T COG2119 145 LASVLAVLLGKLIAGKLPERLLRFIAALLFLIFALVLL 182 (190)
T ss_pred HHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 33455667888999999999999999999888654443
No 293
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=28.81 E-value=6.6e+02 Score=25.85 Aligned_cols=67 Identities=12% Similarity=0.055 Sum_probs=31.4
Q ss_pred chHHHHHHHHHHHhhhhhhcc--cccccc-ccccchhhhHHHHHH--HHHHHHHHHHhhhhccc---cccCccceeeeh
Q 011720 241 NWKMLLLFPAAWASNFFYSYQ--FNNVNG-LMFNLRTRGLNNVFY--WGAQMLGSVGIGYVMDF---SFQSLRTRGLVG 311 (479)
Q Consensus 241 ~~r~ll~~~~~~~~~~~~s~~--~~~~~~-~~f~~~~~~l~~~~~--~i~~~i~~~~~g~l~Dr---~~~gRr~~~~~g 311 (479)
+++++++..+...++.-+..+ .+..+. .+-+-+++++.+..+ ..-.++ ...+.|. +++|||+.+++=
T Consensus 30 ~~~illLl~LYllQGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~sLKll----WaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPFSLKLL----WAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHHHHHHH----HHhhhHHHHHHhhccccceeee
Confidence 345666776667776632222 122222 122333444443322 222333 3445561 138899987763
No 294
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=28.28 E-value=81 Score=30.44 Aligned_cols=42 Identities=17% Similarity=0.092 Sum_probs=23.9
Q ss_pred cccccccchhhhHHHHH-HHHHHHHHHHHhhhhccccccCccceee
Q 011720 265 VNGLMFNLRTRGLNNVF-YWGAQMLGSVGIGYVMDFSFQSLRTRGL 309 (479)
Q Consensus 265 ~~~~~f~~~~~~l~~~~-~~i~~~i~~~~~g~l~Dr~~~gRr~~~~ 309 (479)
|..++|...+.+...+. ++-. ++.+.+.|-+.|| .|||+...
T Consensus 64 YstYgFgkG~IgqLfiaGfgSs-mLFGtivgSLaDk--qGRKracv 106 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGSS-MLFGTIVGSLADK--QGRKRACV 106 (454)
T ss_pred ehhcCccCCccceeeecccchH-HHHHHHHHHHHhh--hcccccee
Confidence 33456766666544333 3333 3444556778999 57887543
No 295
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=27.55 E-value=1.5e+02 Score=29.47 Aligned_cols=57 Identities=4% Similarity=-0.098 Sum_probs=44.7
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHhc-CC-chhhhHHHHHHHHHHHHHHHHHhhhcc
Q 011720 353 GPFVLYFSYGLLDAMFQSMVYWVIGALA-DD-SETLSRYTGFYKGVQSAGAAVAWQVDT 409 (479)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~~~~~~i~-~~-~~~r~~~~~~~~~~~~~g~~i~~~~~~ 409 (479)
..+.-.++.+++.++.-+.+....++.+ ++ .++|.+++..+....++|..++....+
T Consensus 35 ~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~ 93 (372)
T PF00854_consen 35 LFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVP 93 (372)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccch
Confidence 3444445678888888888888899888 33 457788999999999999999987765
No 296
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=24.35 E-value=1.9e+02 Score=28.67 Aligned_cols=63 Identities=10% Similarity=0.010 Sum_probs=48.8
Q ss_pred cCchhhHHHHHHHHhhhhhhhhhhhhhhhhcCCCccchHhHHHHHHHHHHhhhhhhhHHHhhh
Q 011720 112 HHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSYPTATRKGTYISLFWSIFNMGGVVGGLIPFIM 174 (479)
Q Consensus 112 ~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~~~~~~RG~~~g~~~~~~~~G~~iG~~i~~~i 174 (479)
.++++...+.=+.-|+-.|...+...-=+.+-.+|++|..+++.-...-+.|..+++.++..+
T Consensus 339 tpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 339 TPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred ccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 577888888888889888887665554455556889999999998888888888887776554
No 297
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.35 E-value=1.2e+02 Score=33.49 Aligned_cols=53 Identities=13% Similarity=0.170 Sum_probs=38.4
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhhc
Q 011720 355 FVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQVD 408 (479)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 408 (479)
++--++.|++....++.-.+|+.+-. ..++.....|+......+|=++++.+.
T Consensus 241 f~~q~l~GIG~Tpi~tlGisYiDDnv-k~~~SplYlgi~~~~~~lGPaiGfllg 293 (735)
T KOG3626|consen 241 FLGQLLLGIGATPIFTLGISYIDDNV-KKKNSPLYLGILYSMAILGPAIGFLLG 293 (735)
T ss_pred HHHHHHhhcCCCCCccCCCccccccc-cccCCcHHHHHHHHHHHhhhHHHHHHH
Confidence 33346677777777776667787777 455667888988888888888887754
No 298
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=24.16 E-value=8.4e+02 Score=25.52 Aligned_cols=52 Identities=8% Similarity=0.144 Sum_probs=35.6
Q ss_pred HHHHHHHHhhHHHHHH-HHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHhhh
Q 011720 355 FVLYFSYGLLDAMFQS-MVYWVIGALADDSETLSRYTGFYKGVQSAGAAVAWQV 407 (479)
Q Consensus 355 ~~~~~~~g~~~~~~~~-~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~i~~~~ 407 (479)
...|+....+....-+ .-|.+..+++ +.++-.|-+++.....++|..++-.+
T Consensus 132 ~~FYv~~elw~~~vvS~lFW~fandi~-t~~qakRfy~l~~~ganlg~i~sg~~ 184 (472)
T TIGR00769 132 ALFYVMAELWGSVVLSLLFWGFANQIT-TIDEAKRFYALFGLGANVALIFSGRT 184 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555566665555 4556678888 67777788888888777777776543
No 299
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=23.05 E-value=1.4e+02 Score=26.01 Aligned_cols=50 Identities=20% Similarity=0.204 Sum_probs=30.8
Q ss_pred CCchhHHHHHHHHHhhHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHH
Q 011720 349 NDFAGPFVLYFSYGLLDAMFQSMVYWVIGALADDSETLSRYTGFYKGVQSAGAA 402 (479)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~~~~g~~ 402 (479)
+.++..+.-++++|.+ .-.+.|-+++.-+ |++.-+.-.|+-.+-.+.+..
T Consensus 95 P~~~~~~~S~~~Fg~g---llGisYGilSaSW-D~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLG---LLGISYGILSASW-DPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred CchHHHHHHHHHHHHH---HHhhhhhhccccc-CCCCCCCcccHHHHHHhHHHH
Confidence 4444444444444443 4456888889888 777667777776666555544
No 300
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=20.15 E-value=2.5e+02 Score=28.36 Aligned_cols=92 Identities=8% Similarity=-0.042 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHhhhhhhhhhhccchhHHHhhhhHHHHHHHHHHHhhhccCchhhHHHHHHHHhhhhhhhhhhhhhhhhcC
Q 011720 64 ANTALYTTFSVFGILGGGVYNIFGPRVTLAAGCSTYVLYAGSFLYYNHHHDQTFAVVAGAVLGIGAGLLWAGQGAIMTSY 143 (479)
Q Consensus 64 ~~~~~~~~~aig~l~~g~l~d~~Grk~~l~ig~~~~~i~~~~~~~~~~~~~~~~li~~R~i~G~g~g~~~~~~~~~i~e~ 143 (479)
.-++..+..+++.+..|.+.-.+.|..-+.++..--.. .+..+..+.++++|..+++-++-+.-.....+.+..-+++.
T Consensus 276 veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~-agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~n 354 (433)
T KOG3810|consen 276 VEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQ-AGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARN 354 (433)
T ss_pred HHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHh-hhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHh
Confidence 34455666788889999998887776544444332222 12223333578899888887777777777666666666666
Q ss_pred CCccchHhHHHHH
Q 011720 144 PTATRKGTYISLF 156 (479)
Q Consensus 144 ~~~~~RG~~~g~~ 156 (479)
-+.+.-|..+|+-
T Consensus 355 L~~e~~gLvFGiN 367 (433)
T KOG3810|consen 355 LSSELFGLVFGIN 367 (433)
T ss_pred hhhhhheeeeehH
Confidence 6667667766664
Done!