BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011721
(479 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NSK0|KLC4_HUMAN Kinesin light chain 4 OS=Homo sapiens GN=KLC4 PE=1 SV=3
Length = 619
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 154 NLAWAYLQQNDYESAERYYMKALSLESDK---------NKQCNLAICLIRLNRIAEAKSL 204
NLA Q YE+ ERYY +AL++ + + NLA C ++ + AEA++L
Sbjct: 342 NLALLCQNQGKYEAVERYYQRALAIYEGQLGPDNPNVARTKNNLASCYLKQGKYAEAETL 401
Query: 205 LQAV 208
+ +
Sbjct: 402 YKEI 405
>sp|Q2HJJ0|KLC4_BOVIN Kinesin light chain 4 OS=Bos taurus GN=KLC4 PE=2 SV=2
Length = 616
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 154 NLAWAYLQQNDYESAERYYMKALSLESDK---------NKQCNLAICLIRLNRIAEAKSL 204
NLA Q YE+ ERYY +AL++ + + NLA C ++ + AEA++L
Sbjct: 339 NLALLCQNQGKYEAVERYYRRALAIYEGQLGPDNPNVARTKNNLASCYLKQGKYAEAETL 398
Query: 205 LQAV 208
+ +
Sbjct: 399 YKEI 402
>sp|Q43009|SUS3_ORYSJ Sucrose synthase 3 OS=Oryza sativa subsp. japonica GN=SUS3 PE=1
SV=2
Length = 816
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 17/92 (18%)
Query: 87 SQESLDNV-----LLELYKRSKRIEEEIELLKRKLKKTEEVIACG--GKSTKIARSQGRK 139
S LD+V L+ELY R+ R++E + L V+ CG GK +K Q
Sbjct: 580 SMARLDHVKNLTGLVELYGRNPRLQELVNL----------VVVCGDHGKESKDKEEQAEF 629
Query: 140 TQITLVQELSRISGNLAWAYLQQNDYESAERY 171
++ + E ++G++ W Q N + E Y
Sbjct: 630 KKMFNLIEQYNLNGHIRWISAQMNRVRNGELY 661
>sp|Q9DBS5|KLC4_MOUSE Kinesin light chain 4 OS=Mus musculus GN=Klc4 PE=1 SV=1
Length = 619
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 154 NLAWAYLQQNDYESAERYYMKALSLESDK---------NKQCNLAICLIRLNRIAEAKSL 204
NLA Q YE+ ERYY +AL++ + + NLA C ++ + +EA++L
Sbjct: 342 NLALLCQNQGKYEAVERYYQRALAIYESQLGPDNPNVARTKNNLASCYLKQGKYSEAEAL 401
Query: 205 LQAV 208
+ +
Sbjct: 402 YKEI 405
>sp|P49036|SUS2_MAIZE Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1
Length = 816
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 95 LLELYKRSKRIEEEIELLKRKLKKTEEVIACG--GKSTKIARSQGRKTQITLVQELSRIS 152
L+ELY R+KR++E + L V+ CG G +K Q ++ + E ++
Sbjct: 593 LVELYGRNKRLQELVNL----------VVVCGDHGNPSKDKEEQAEFKKMFDLIEQYNLN 642
Query: 153 GNLAWAYLQQNDYESAERY 171
G++ W Q N + E Y
Sbjct: 643 GHIRWISAQMNRVRNGELY 661
>sp|Q5RBW9|TTC27_PONAB Tetratricopeptide repeat protein 27 OS=Pongo abelii GN=TTC27 PE=2
SV=1
Length = 843
Score = 32.7 bits (73), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 101 RSKRIEEEIELLKRKLKKTEEVIACGGKSTKIARSQGRKTQITLVQELSRISGNLAWAYL 160
RS R + LL + K+ +E + C +S KI Q + +L AYL
Sbjct: 525 RSARAQRSKALLHLRNKEFQECVECFERSVKINPMQ------------LGVWFSLGCAYL 572
Query: 161 QQNDYESAERYYMKALSLESDKNKQC-NLAICLIRLNRIAEA-KSLLQAVRASSRNEKMD 218
DY+ + + + + ++LE D + NL+ IRL + +A ++L +A++ + + ++
Sbjct: 573 ALEDYQGSAKAFQRCVTLEPDNAEAWNNLSTSYIRLKQKVKAFRTLQEALKCNYEHWQIW 632
Query: 219 ESY 221
E+Y
Sbjct: 633 ENY 635
>sp|Q6INC1|TT21B_XENLA Tetratricopeptide repeat protein 21B OS=Xenopus laevis GN=ttc21b
PE=2 SV=1
Length = 1312
Score = 32.7 bits (73), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 79/187 (42%), Gaps = 21/187 (11%)
Query: 12 IHKVPAGDSPYVRAKRAQLVEKDPSRAISLFWAA--INAGDRVDSALKDMAVVMKQLDRS 69
+HK P S R +A + +A++ + AA I+ D + L ++ + +KQ ++
Sbjct: 747 LHKNPQDASLANRIGQALIKTHQYKKAVNYYEAAQKISGQDFLCCDLAELLIKLKQYSKA 806
Query: 70 EEAI------EAIKSFRCLCADDSQESLDNVLLELYKRSKRIEEEIELLKRKLKKTEEVI 123
E + E + + D L + YK+ EE ++L + L+ + ++
Sbjct: 807 EAVLKQALAHEPVSDLTSMVTDAKCLGLLGTTYQNYKK----EESADILNKALELQQRIL 862
Query: 124 A-CGGKSTKIARSQGRKTQITLVQELSRISGNLAWAYLQQNDYESAERYYMKALSLESDK 182
+ ++A +Q + T S I LA Y+ Q +YE A YY +A+ D
Sbjct: 863 KRVPMEQPEMAPAQKQAT--------SEICVQLAEHYVDQRNYEQAANYYKEAMVYSQDS 914
Query: 183 NKQCNLA 189
+ L+
Sbjct: 915 KVKLQLS 921
>sp|Q6P3X3|TTC27_HUMAN Tetratricopeptide repeat protein 27 OS=Homo sapiens GN=TTC27 PE=1
SV=1
Length = 843
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 101 RSKRIEEEIELLKRKLKKTEEVIACGGKSTKIARSQGRKTQITLVQELSRISGNLAWAYL 160
RS R + LL + K+ +E + C +S KI Q + +L AYL
Sbjct: 525 RSARAQRSKALLHLRNKEFQECVECFERSVKINPMQ------------LGVWFSLGCAYL 572
Query: 161 QQNDYESAERYYMKALSLESDKNKQC-NLAICLIRLNRIAEA-KSLLQAVRASSRNEKMD 218
DY+ + + + + ++LE D + NL+ IRL + +A ++L +A++ + + ++
Sbjct: 573 ALEDYQGSAKAFQRCVTLEPDNAEAWNNLSTSYIRLKQKVKAFRTLQEALKCNYEHWQIW 632
Query: 219 ESY 221
E+Y
Sbjct: 633 ENY 635
>sp|Q5PQM2|KLC4_RAT Kinesin light chain 4 OS=Rattus norvegicus GN=Klc4 PE=2 SV=1
Length = 619
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 154 NLAWAYLQQNDYESAERYYMKALSLESDK---------NKQCNLAICLIRLNRIAEAKSL 204
NLA Q YE+ ERYY +AL++ + + NLA C ++ + +EA++L
Sbjct: 342 NLALLCQNQGKYEAVERYYQRALAIYERQLGPDNPNVARTKNNLASCYLKQGKYSEAETL 401
Query: 205 LQAV 208
+ +
Sbjct: 402 YKEI 405
>sp|Q91W40|KLC3_MOUSE Kinesin light chain 3 OS=Mus musculus GN=Klc3 PE=1 SV=1
Length = 508
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 148 LSRISGNLAWAYLQQNDYESAERYYMKALSLES 180
+++ NLA AYL+QN Y+ AE Y + LS E+
Sbjct: 374 VAKTKNNLASAYLKQNKYQQAEELYKEILSQEA 406
>sp|Q68G30|KLC3_RAT Kinesin light chain 3 OS=Rattus norvegicus GN=Klc3 PE=1 SV=1
Length = 505
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 148 LSRISGNLAWAYLQQNDYESAERYYMKALSLES 180
+++ NLA AYL+QN Y+ AE Y + LS E+
Sbjct: 374 VAKTKNNLASAYLKQNKYQQAEELYKEILSQEA 406
>sp|A1S572|ASTB_SHEAM N-succinylarginine dihydrolase OS=Shewanella amazonensis (strain
ATCC BAA-1098 / SB2B) GN=astB PE=3 SV=1
Length = 444
Score = 32.3 bits (72), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 35/180 (19%)
Query: 289 RSNGATVTSTKTEARAVLKKAYALP-AGVITNSASPITQP-----RRPSWTFDNKDQRNQ 342
+SN A V++ K A+ LKKA AL G++ +P +P RR +T + D +Q
Sbjct: 29 QSNAAQVSNPKDAAKQGLKKAKALADMGMVQGMLAPQERPDIHTLRRVGFTGSDADVLSQ 88
Query: 343 QGKDD-------ATDSPHWKLPIKQMTASENMQEDAVMFTQPRSSWGFGNRAQRRERWRE 395
K A+ S W ++ S + + + FT N + R E
Sbjct: 89 AAKASPVLLQACASASSMWTANAATVSPSADSDDGKLHFTP-------ANLVDKLHRSIE 141
Query: 396 DTVSGSVCKLTFENAITSENMEAHVINNLNGKLQASTNERSEMGRPDSGAALSSPTCEDW 455
+G++ K F T E AH E G D GAA + C D+
Sbjct: 142 PVTTGNILKAIF----TDERYFAH---------HQHLPEHPHFG--DEGAANHTRLCHDY 186
>sp|Q9BX63|FANCJ_HUMAN Fanconi anemia group J protein OS=Homo sapiens GN=BRIP1 PE=1 SV=1
Length = 1249
Score = 32.3 bits (72), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 196 NRIAEAKSLLQAVRASSRNEKMDESYAKSFEHASLMLTELESQSML--QPTDYGEDKRKK 253
+++A S+L+ + +S+ + ES S + +L+ + L Q L +P D G ++ +
Sbjct: 24 SQLAMMNSILRGL--NSKQHCLLESPTGSGKSLALLCSALAWQQSLSGKPADEGVSEKAE 81
Query: 254 ILSSCTYINGSEENVSRFMVPRKCRKFYYPKTPCERSNGATVTSTKTEARAVL 306
+ SC S++ + M R F YP TP NG + T + + L
Sbjct: 82 VQLSCCCACHSKDFTNNDMNQGTSRHFNYPSTPPSERNGTSSTCQDSPEKTTL 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.127 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,466,665
Number of Sequences: 539616
Number of extensions: 6370200
Number of successful extensions: 23419
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 23220
Number of HSP's gapped (non-prelim): 343
length of query: 479
length of database: 191,569,459
effective HSP length: 121
effective length of query: 358
effective length of database: 126,275,923
effective search space: 45206780434
effective search space used: 45206780434
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)